Query psy5806
Match_columns 1332
No_of_seqs 579 out of 4075
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 18:28:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5806.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5806hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a0p_A LRP6, LRP-6, low-densit 100.0 4.6E-98 2E-102 942.9 75.4 594 705-1325 4-618 (628)
2 3s94_A LRP-6, low-density lipo 100.0 3E-96 1E-100 926.0 70.8 593 707-1327 9-618 (619)
3 4a0p_A LRP6, LRP-6, low-densit 100.0 9.4E-96 3E-100 921.9 68.9 567 432-1009 4-620 (628)
4 3s94_A LRP-6, low-density lipo 100.0 1.6E-95 6E-100 919.3 65.8 567 434-1009 9-618 (619)
5 3m0c_C LDL receptor, low-densi 100.0 8E-73 2.7E-77 724.8 43.6 333 670-1013 358-714 (791)
6 3m0c_C LDL receptor, low-densi 100.0 6.3E-70 2.2E-74 698.1 36.9 586 10-708 60-714 (791)
7 1n7d_A LDL receptor, low-densi 100.0 3.8E-68 1.3E-72 680.8 42.9 331 671-1012 341-695 (699)
8 1n7d_A LDL receptor, low-densi 100.0 6.7E-65 2.3E-69 650.7 33.0 534 10-706 83-694 (699)
9 3v64_C Agrin; beta propeller, 100.0 3.7E-55 1.3E-59 516.6 39.1 338 970-1330 2-346 (349)
10 3v64_C Agrin; beta propeller, 100.0 1.2E-53 4.2E-58 503.6 40.0 333 664-1009 2-343 (349)
11 3v65_B Low-density lipoprotein 100.0 8.5E-52 2.9E-56 494.8 40.4 336 969-1327 44-386 (386)
12 3p5b_L Low density lipoprotein 100.0 1.9E-51 6.3E-56 493.7 42.7 338 969-1327 40-398 (400)
13 3p5b_L Low density lipoprotein 100.0 1.6E-50 5.5E-55 485.5 41.4 335 663-1009 40-398 (400)
14 3v65_B Low-density lipoprotein 100.0 2.4E-50 8E-55 482.3 40.1 334 663-1009 44-386 (386)
15 3sov_A LRP-6, low-density lipo 100.0 5.1E-47 1.7E-51 440.2 37.2 300 1011-1328 3-310 (318)
16 3sov_A LRP-6, low-density lipo 100.0 1.6E-46 5.5E-51 436.1 36.2 297 705-1009 2-309 (318)
17 1ijq_A LDL receptor, low-densi 100.0 4.6E-44 1.6E-48 416.4 39.5 296 1012-1326 1-315 (316)
18 1ijq_A LDL receptor, low-densi 100.0 3.9E-44 1.3E-48 417.0 38.7 292 707-1008 1-315 (316)
19 1npe_A Nidogen, entactin; glyc 100.0 2.3E-27 8E-32 268.6 33.4 254 1012-1282 1-261 (267)
20 1npe_A Nidogen, entactin; glyc 99.9 1.6E-25 5.4E-30 253.5 33.4 237 708-949 2-243 (267)
21 3s25_A Hypothetical 7-bladed b 99.9 4.8E-21 1.6E-25 219.4 31.2 265 563-945 24-293 (302)
22 3s25_A Hypothetical 7-bladed b 99.9 8.4E-21 2.9E-25 217.3 27.9 265 882-1258 24-293 (302)
23 2fyj_A Low-density lipoprotein 99.8 3.8E-21 1.3E-25 172.6 8.6 77 13-94 3-81 (82)
24 2fcw_B LDL receptor, low-densi 99.8 2.8E-21 9.7E-26 171.9 3.9 76 14-94 2-79 (80)
25 3tc9_A Hypothetical hydrolase; 99.8 9.4E-17 3.2E-21 194.0 29.8 262 465-812 135-429 (430)
26 3tc9_A Hypothetical hydrolase; 99.7 2.8E-16 9.6E-21 189.8 29.3 246 508-860 135-429 (430)
27 4hw6_A Hypothetical protein, I 99.7 8.1E-16 2.8E-20 185.7 30.5 245 508-860 137-432 (433)
28 3hrp_A Uncharacterized protein 99.7 9.7E-16 3.3E-20 184.1 30.9 247 508-860 129-409 (409)
29 4hw6_A Hypothetical protein, I 99.7 8.5E-16 2.9E-20 185.6 28.2 262 465-812 137-432 (433)
30 2qc5_A Streptogramin B lactona 99.7 3.9E-14 1.3E-18 161.3 34.9 276 871-1256 19-299 (300)
31 3kya_A Putative phosphatase; s 99.7 8.4E-15 2.9E-19 176.3 29.5 264 507-863 136-477 (496)
32 3hrp_A Uncharacterized protein 99.7 7.3E-15 2.5E-19 176.5 27.9 222 1013-1255 142-408 (409)
33 2z2n_A Virginiamycin B lyase; 99.7 1.2E-13 4.1E-18 157.2 35.2 277 871-1258 14-296 (299)
34 2qc5_A Streptogramin B lactona 99.7 1.2E-13 4.1E-18 157.3 35.1 281 507-902 17-298 (300)
35 3fvz_A Peptidyl-glycine alpha- 99.7 4.5E-15 1.6E-19 172.9 23.1 225 1043-1278 22-298 (329)
36 3kya_A Putative phosphatase; s 99.6 2.9E-14 1E-18 171.6 30.3 262 466-816 138-478 (496)
37 2fcw_B LDL receptor, low-densi 99.6 5.4E-17 1.8E-21 144.3 4.5 72 58-155 2-74 (80)
38 2fyj_A Low-density lipoprotein 99.6 1.9E-16 6.6E-21 141.9 7.0 73 57-154 3-77 (82)
39 1rwi_B Serine/threonine-protei 99.6 1.3E-14 4.4E-19 163.1 23.0 204 1037-1258 13-223 (270)
40 2z2n_A Virginiamycin B lyase; 99.6 6.4E-13 2.2E-17 151.1 35.7 281 822-1212 12-296 (299)
41 3fvz_A Peptidyl-glycine alpha- 99.6 2E-13 7E-18 158.9 29.9 166 466-633 23-233 (329)
42 1rwi_B Serine/threonine-protei 99.6 2.6E-14 9E-19 160.5 21.3 217 1021-1258 46-265 (270)
43 3g4e_A Regucalcin; six bladed 99.6 4.3E-13 1.5E-17 153.8 27.1 217 1044-1278 12-247 (297)
44 3dsm_A Uncharacterized protein 99.5 2.8E-12 9.5E-17 149.3 32.6 205 1046-1268 85-309 (328)
45 1q7f_A NHL, brain tumor CG1071 99.5 1.2E-12 4E-17 148.7 26.0 198 1043-1256 28-237 (286)
46 2fp8_A Strictosidine synthase; 99.5 4.5E-13 1.5E-17 155.5 22.5 202 1044-1256 18-268 (322)
47 1q7f_A NHL, brain tumor CG1071 99.5 3.2E-12 1.1E-16 145.1 26.4 195 1045-1256 77-279 (286)
48 2p4o_A Hypothetical protein; p 99.5 1.8E-12 6E-17 149.4 23.6 192 1045-1256 32-241 (306)
49 3dsm_A Uncharacterized protein 99.5 3.3E-11 1.1E-15 140.2 33.6 252 782-1138 44-319 (328)
50 3vgz_A Uncharacterized protein 99.5 2.9E-10 9.9E-15 132.4 41.5 280 871-1246 40-334 (353)
51 3dr2_A Exported gluconolactona 99.4 7.8E-12 2.7E-16 143.8 25.2 199 1043-1256 43-266 (305)
52 3e5z_A Putative gluconolactona 99.4 1.6E-11 5.5E-16 140.2 27.4 213 1043-1277 26-261 (296)
53 2fp8_A Strictosidine synthase; 99.4 6.7E-12 2.3E-16 145.5 23.7 196 1045-1258 80-314 (322)
54 3vgz_A Uncharacterized protein 99.4 2.6E-09 8.9E-14 124.2 43.1 279 467-845 41-334 (353)
55 2ism_A Putative oxidoreductase 99.4 1.6E-11 5.4E-16 144.2 23.9 203 1042-1258 28-298 (352)
56 1ri6_A Putative isomerase YBHE 99.4 2.5E-09 8.6E-14 123.6 38.9 310 750-1145 4-337 (343)
57 3qqz_A Putative uncharacterize 99.3 3.7E-10 1.3E-14 124.7 28.7 205 1040-1258 21-254 (255)
58 2p4o_A Hypothetical protein; p 99.3 1.7E-10 5.9E-15 132.6 27.0 212 1014-1246 44-278 (306)
59 3a9g_A Putative uncharacterize 99.3 2.8E-10 9.5E-15 133.5 28.4 253 544-904 20-352 (354)
60 2ism_A Putative oxidoreductase 99.3 1.6E-10 5.5E-15 135.6 26.0 250 503-847 24-336 (352)
61 3a9g_A Putative uncharacterize 99.3 4.9E-10 1.7E-14 131.4 29.9 266 504-861 23-352 (354)
62 3scy_A Hypothetical bacterial 99.3 9.8E-09 3.4E-13 120.4 38.7 318 826-1228 3-359 (361)
63 1ri6_A Putative isomerase YBHE 99.3 3.1E-09 1.1E-13 122.8 33.5 304 793-1194 4-337 (343)
64 2dg1_A DRP35, lactonase; beta 99.3 7.3E-10 2.5E-14 128.4 28.2 201 1045-1256 45-262 (333)
65 3e5z_A Putative gluconolactona 99.3 1.8E-09 6.3E-14 123.0 30.8 248 860-1212 16-287 (296)
66 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 2E-10 6.8E-15 131.7 22.9 223 1042-1279 15-275 (314)
67 2qe8_A Uncharacterized protein 99.3 1.4E-10 4.7E-15 135.8 21.0 192 1043-1250 65-314 (343)
68 3hfq_A Uncharacterized protein 99.2 2.1E-08 7.2E-13 116.7 38.6 284 838-1210 4-316 (347)
69 3u4y_A Uncharacterized protein 99.2 4.9E-09 1.7E-13 121.0 32.8 288 746-1126 5-310 (331)
70 3g4e_A Regucalcin; six bladed 99.2 5E-10 1.7E-14 128.1 23.9 204 737-948 11-233 (297)
71 2ghs_A AGR_C_1268P; regucalcin 99.2 1.8E-09 6.1E-14 125.3 28.8 212 1046-1277 50-276 (326)
72 2xrc_A Human complement factor 99.2 2.2E-12 7.4E-17 160.2 4.1 112 9-161 162-276 (565)
73 2qe8_A Uncharacterized protein 99.2 5.9E-10 2E-14 130.4 24.6 215 1045-1279 17-298 (343)
74 2iwa_A Glutamine cyclotransfer 99.2 1.9E-09 6.4E-14 119.8 27.1 194 1046-1258 22-238 (266)
75 3sre_A PON1, serum paraoxonase 99.2 4.4E-10 1.5E-14 130.4 22.5 204 1041-1256 45-297 (355)
76 2xrc_A Human complement factor 99.2 5.2E-12 1.8E-16 156.8 5.9 72 17-95 206-277 (565)
77 3hfq_A Uncharacterized protein 99.2 4E-09 1.4E-13 122.9 30.2 203 1044-1258 85-320 (347)
78 3dr2_A Exported gluconolactona 99.2 2.9E-09 1E-13 122.1 28.2 245 860-1209 33-304 (305)
79 3u4y_A Uncharacterized protein 99.2 3.3E-09 1.1E-13 122.4 28.1 218 1024-1258 22-253 (331)
80 2gtl_O Extracellular hemoglobi 99.2 1.7E-12 6E-17 135.5 -0.1 79 13-107 53-134 (215)
81 1l0q_A Surface layer protein; 99.2 9.3E-08 3.2E-12 113.0 40.5 205 1046-1268 75-283 (391)
82 2g8s_A Glucose/sorbosone dehyd 99.2 7.2E-10 2.4E-14 130.1 21.5 212 1043-1258 16-309 (353)
83 3c75_H MADH, methylamine dehyd 99.2 1.7E-09 5.7E-14 128.9 23.5 232 1024-1267 101-409 (426)
84 1l0q_A Surface layer protein; 99.1 1.6E-08 5.6E-13 119.6 31.4 225 1024-1268 14-241 (391)
85 2kny_A LRP-1, linker, APO-E; l 99.1 3E-12 1E-16 113.4 -0.8 67 10-79 4-75 (80)
86 2g8s_A Glucose/sorbosone dehyd 99.1 3.2E-09 1.1E-13 124.5 24.1 231 1015-1255 32-352 (353)
87 1nir_A Nitrite reductase; hemo 99.1 3E-07 1E-11 114.3 41.3 346 831-1277 144-532 (543)
88 3scy_A Hypothetical bacterial 99.1 3.5E-08 1.2E-12 115.6 31.2 201 1045-1258 100-340 (361)
89 3bws_A Protein LP49; two-domai 99.1 3.6E-07 1.2E-11 109.5 40.3 197 1045-1256 212-431 (433)
90 3das_A Putative oxidoreductase 99.1 8.8E-09 3E-13 118.9 24.4 226 1042-1279 29-315 (347)
91 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 1.2E-08 3.9E-13 116.9 25.1 196 1045-1257 71-299 (314)
92 3bws_A Protein LP49; two-domai 99.1 1.4E-06 5E-11 104.2 44.4 285 825-1211 123-432 (433)
93 1cr8_A Protein (LOW density li 99.1 7.1E-11 2.4E-15 90.9 3.6 37 14-50 3-39 (42)
94 1ajj_A LR5, low-density lipopr 99.1 6.4E-11 2.2E-15 88.5 3.2 37 58-94 1-37 (37)
95 1ajj_A LR5, low-density lipopr 99.1 6.2E-11 2.1E-15 88.6 3.0 36 14-50 1-36 (37)
96 2gtl_O Extracellular hemoglobi 99.0 1.2E-11 4E-16 129.4 -1.8 62 37-105 39-103 (215)
97 2knx_A Prolow-density lipoprot 99.0 1.1E-10 3.7E-15 93.1 3.9 39 12-50 4-42 (50)
98 2m0p_A Low-density lipoprotein 99.0 5.6E-11 1.9E-15 94.7 2.1 40 55-94 3-42 (52)
99 3dpr_E LDL-receptor class A 3; 99.0 1.1E-10 3.7E-15 88.3 3.4 36 15-50 1-37 (39)
100 1cr8_A Protein (LOW density li 99.0 1.4E-10 4.7E-15 89.3 4.0 39 57-95 2-41 (42)
101 1k7b_A Subgroup A ROUS sarcoma 99.0 7.5E-11 2.5E-15 93.4 2.4 39 12-50 4-46 (47)
102 3a7q_B Low-density lipoprotein 99.0 1.2E-10 4.3E-15 90.5 3.4 39 56-94 5-43 (44)
103 2jm4_A Relaxin receptor 1; LDL 99.0 1.7E-10 5.9E-15 89.3 3.9 39 56-94 4-43 (43)
104 2p9w_A MAL S 1 allergenic prot 99.0 1.8E-08 6.2E-13 113.9 22.1 195 1046-1255 14-263 (334)
105 1d2l_A Lipoprotein receptor re 99.0 1.8E-10 6.2E-15 89.6 4.0 38 12-50 3-40 (45)
106 2m0p_A Low-density lipoprotein 99.0 8.2E-11 2.8E-15 93.7 1.9 37 13-50 5-41 (52)
107 1d2l_A Lipoprotein receptor re 99.0 1.5E-10 5.2E-15 90.1 3.2 38 56-93 3-40 (45)
108 2jm4_A Relaxin receptor 1; LDL 99.0 2E-10 6.8E-15 88.9 3.8 40 11-50 3-42 (43)
109 2mad_H Methylamine dehydrogena 99.0 1.3E-07 4.3E-12 111.8 29.9 241 1024-1280 49-370 (373)
110 3a7q_B Low-density lipoprotein 99.0 1.9E-10 6.5E-15 89.5 3.5 38 12-50 5-42 (44)
111 2knx_A Prolow-density lipoprot 99.0 3E-10 1E-14 90.6 4.2 42 56-98 4-46 (50)
112 3qqz_A Putative uncharacterize 99.0 2E-07 6.8E-12 102.9 28.1 205 733-944 20-253 (255)
113 1k7b_A Subgroup A ROUS sarcoma 98.9 2.7E-10 9.3E-15 90.2 2.8 39 56-94 4-47 (47)
114 1qks_A Cytochrome CD1 nitrite 98.9 4.1E-06 1.4E-10 104.1 41.7 346 832-1277 163-556 (567)
115 1pby_B Quinohemoprotein amine 98.9 2.6E-07 8.7E-12 106.2 28.9 201 1046-1268 35-318 (337)
116 2dg1_A DRP35, lactonase; beta 98.9 1.2E-07 4.1E-12 109.6 25.7 201 738-942 44-261 (333)
117 1nir_A Nitrite reductase; hemo 98.9 3.4E-07 1.1E-11 113.8 31.2 229 1011-1257 147-402 (543)
118 3das_A Putative oxidoreductase 98.9 7.7E-07 2.6E-11 102.7 31.8 256 775-1109 25-327 (347)
119 1jrf_A TVA LDL-A module, subgr 98.9 1.5E-10 5.2E-15 91.7 0.5 39 12-50 2-44 (47)
120 1j8e_A Low-density lipoprotein 98.9 2.8E-10 9.7E-15 88.5 1.8 38 12-50 2-39 (44)
121 3dpr_E LDL-receptor class A 3; 98.9 2.6E-10 8.8E-15 86.3 1.5 36 59-94 1-38 (39)
122 2ghs_A AGR_C_1268P; regucalcin 98.9 7.4E-07 2.5E-11 103.1 31.6 235 865-1201 41-293 (326)
123 2iwa_A Glutamine cyclotransfer 98.9 1.4E-07 4.9E-12 104.7 23.9 183 1013-1211 32-237 (266)
124 3sjl_D Methylamine dehydrogena 98.9 2E-07 6.7E-12 109.2 26.3 242 1024-1278 61-380 (386)
125 2i1p_A Low-density lipoprotein 98.9 4.2E-10 1.4E-14 89.4 2.5 39 57-95 5-44 (48)
126 1mda_H Methylamine dehydrogena 98.9 3.3E-08 1.1E-12 115.9 19.7 228 1024-1277 48-362 (368)
127 1j8e_A Low-density lipoprotein 98.9 5.7E-10 2E-14 86.8 3.1 37 57-93 3-39 (44)
128 2i1p_A Low-density lipoprotein 98.9 3.6E-10 1.2E-14 89.7 1.1 38 13-51 5-43 (48)
129 2ymu_A WD-40 repeat protein; u 98.9 0.00082 2.8E-08 83.4 69.8 557 510-1252 17-575 (577)
130 2kny_A LRP-1, linker, APO-E; l 98.9 1.1E-09 3.7E-14 97.0 3.9 52 55-107 5-62 (80)
131 2oiz_A Aromatic amine dehydrog 98.8 1E-06 3.5E-11 103.5 30.4 223 1024-1258 33-335 (361)
132 1jrf_A TVA LDL-A module, subgr 98.8 4.1E-10 1.4E-14 89.2 0.5 39 57-95 3-46 (47)
133 1cru_A Protein (soluble quinop 98.8 2.3E-07 7.9E-12 112.1 23.8 157 1042-1202 24-249 (454)
134 1jof_A Carboxy-CIS,CIS-muconat 98.8 2.7E-07 9.3E-12 108.5 23.9 201 1047-1258 85-342 (365)
135 3nok_A Glutaminyl cyclase; bet 98.8 1.6E-06 5.3E-11 95.1 27.2 187 1047-1255 57-264 (268)
136 1jof_A Carboxy-CIS,CIS-muconat 98.8 5.6E-07 1.9E-11 105.8 25.8 203 1043-1258 38-293 (365)
137 3c75_H MADH, methylamine dehyd 98.8 3.5E-06 1.2E-10 100.3 32.5 286 791-1175 82-409 (426)
138 1pby_B Quinohemoprotein amine 98.8 1.9E-06 6.4E-11 98.9 28.4 316 753-1148 3-335 (337)
139 3sjl_D Methylamine dehydrogena 98.7 1.1E-05 3.8E-10 94.3 34.3 305 788-1190 39-384 (386)
140 3nol_A Glutamine cyclotransfer 98.7 1.7E-06 5.7E-11 94.9 25.5 189 1047-1256 45-255 (262)
141 3mbr_X Glutamine cyclotransfer 98.7 3.6E-06 1.2E-10 91.5 27.8 190 1046-1256 22-234 (243)
142 2gtl_N Extracellular hemoglobi 98.7 2.8E-09 9.6E-14 109.9 2.8 60 8-71 46-111 (220)
143 2mad_H Methylamine dehydrogena 98.7 1.6E-05 5.6E-10 93.6 35.6 297 881-1228 30-369 (373)
144 3sfz_A APAF-1, apoptotic pepti 98.7 0.0021 7.2E-08 88.0 61.5 572 466-1149 615-1237(1249)
145 1mda_H Methylamine dehydrogena 98.7 4.8E-07 1.7E-11 105.9 21.3 293 751-1141 32-367 (368)
146 2gtl_M Hemoglobin linker chain 98.7 5.8E-09 2E-13 109.0 3.3 69 9-92 48-120 (217)
147 1jmx_B Amine dehydrogenase; ox 98.7 1.5E-06 5E-11 100.4 23.6 221 1024-1267 23-332 (349)
148 1k32_A Tricorn protease; prote 98.7 0.00028 9.7E-09 94.8 49.1 203 1045-1258 379-638 (1045)
149 1fwx_A Nitrous oxide reductase 98.7 1.6E-06 5.4E-11 105.6 23.8 185 1034-1228 184-451 (595)
150 2oiz_A Aromatic amine dehydrog 98.6 9.2E-06 3.1E-10 95.3 29.8 89 1050-1143 259-360 (361)
151 2p9w_A MAL S 1 allergenic prot 98.6 1.7E-06 5.9E-11 97.8 22.3 190 740-937 14-258 (334)
152 3sre_A PON1, serum paraoxonase 98.6 8E-06 2.7E-10 94.6 28.4 177 1020-1210 82-297 (355)
153 1qks_A Cytochrome CD1 nitrite 98.6 5.4E-06 1.8E-10 103.0 28.2 188 1056-1258 166-374 (567)
154 1fwx_A Nitrous oxide reductase 98.6 1.5E-06 5.2E-11 105.7 21.9 196 1054-1257 99-361 (595)
155 3nok_A Glutaminyl cyclase; bet 98.6 1.2E-06 4.2E-11 95.9 18.8 154 1091-1268 57-218 (268)
156 3nol_A Glutamine cyclotransfer 98.6 4E-06 1.4E-10 92.0 22.8 179 1014-1209 54-254 (262)
157 1cru_A Protein (soluble quinop 98.6 6.9E-07 2.4E-11 108.0 17.8 157 1084-1248 22-249 (454)
158 2ece_A 462AA long hypothetical 98.6 6.7E-06 2.3E-10 96.8 25.3 199 1043-1256 136-424 (462)
159 3mbr_X Glutamine cyclotransfer 98.5 9.2E-06 3.2E-10 88.3 23.8 156 1090-1268 22-187 (243)
160 1kli_L Factor VIIA; extrinsic 98.5 3.7E-08 1.3E-12 84.8 2.3 43 392-434 4-49 (69)
161 1k32_A Tricorn protease; prote 98.5 0.00032 1.1E-08 94.2 41.1 182 1046-1245 297-491 (1045)
162 1kli_L Factor VIIA; extrinsic 98.5 4.1E-08 1.4E-12 84.5 1.9 42 969-1010 5-47 (69)
163 2wg3_C Hedgehog-interacting pr 98.4 5.5E-06 1.9E-10 99.9 20.9 200 1045-1254 69-370 (463)
164 1jmx_B Amine dehydrogenase; ox 98.4 2.2E-05 7.5E-10 90.4 24.6 152 1056-1212 10-176 (349)
165 1kig_L Factor XA; glycoprotein 98.4 1.2E-07 4.1E-12 76.6 2.8 39 972-1010 1-39 (51)
166 2hqs_A Protein TOLB; TOLB, PAL 98.4 0.0001 3.5E-09 88.1 29.3 220 1024-1258 161-388 (415)
167 3q6k_A 43.2 kDa salivary prote 98.4 6.9E-05 2.4E-09 87.0 26.5 145 1090-1246 153-343 (381)
168 2wph_E Coagulation factor IXA 98.4 1.2E-07 3.9E-12 79.0 2.2 38 972-1009 2-40 (59)
169 3no2_A Uncharacterized protein 98.3 3.6E-05 1.2E-09 86.6 22.8 193 1057-1268 5-203 (276)
170 2bz6_L Blood coagulation facto 98.3 1.1E-07 3.9E-12 77.3 1.5 39 972-1010 2-41 (53)
171 2jkh_L Factor X light chain; p 98.3 1.5E-07 5.3E-12 77.4 2.0 41 394-434 2-44 (55)
172 2gtl_N Extracellular hemoglobi 98.3 3.3E-07 1.1E-11 94.7 4.3 40 56-95 50-93 (220)
173 2gtl_M Hemoglobin linker chain 98.3 3.2E-07 1.1E-11 96.0 4.3 40 56-95 51-94 (217)
174 2ymu_A WD-40 repeat protein; u 98.3 0.022 7.6E-07 70.3 71.1 209 1046-1277 346-555 (577)
175 2jkh_L Factor X light chain; p 98.3 1.9E-07 6.6E-12 76.8 1.7 42 969-1010 1-42 (55)
176 3sfz_A APAF-1, apoptotic pepti 98.3 0.041 1.4E-06 75.1 55.9 151 1046-1209 1087-1247(1249)
177 2bz6_L Blood coagulation facto 98.3 2.2E-07 7.4E-12 75.7 1.9 39 396-434 2-43 (53)
178 3ojy_B Complement component C8 98.3 4.4E-07 1.5E-11 110.9 5.2 79 9-95 21-103 (537)
179 2wg3_C Hedgehog-interacting pr 98.2 5.2E-05 1.8E-09 91.4 22.8 211 1042-1257 11-312 (463)
180 2wph_E Coagulation factor IXA 98.2 3E-07 1E-11 76.5 2.2 39 666-704 2-40 (59)
181 2ece_A 462AA long hypothetical 98.2 9.5E-05 3.3E-09 87.1 24.0 198 1054-1258 93-353 (462)
182 1pgu_A Actin interacting prote 98.2 0.031 1.1E-06 69.3 58.2 190 1046-1256 408-613 (615)
183 2ecf_A Dipeptidyl peptidase IV 98.2 0.00093 3.2E-08 85.9 35.4 360 783-1214 38-462 (741)
184 3ojy_A Complement component C8 98.2 7.9E-07 2.7E-11 108.6 5.9 79 9-95 19-102 (554)
185 1kig_L Factor XA; glycoprotein 98.2 7.4E-07 2.5E-11 71.9 2.6 38 666-704 1-38 (51)
186 1pgu_A Actin interacting prote 98.1 0.044 1.5E-06 68.0 53.8 541 466-1149 18-602 (615)
187 2ojh_A Uncharacterized protein 98.1 0.00021 7.1E-09 79.5 23.8 199 1046-1258 43-259 (297)
188 3q6k_A 43.2 kDa salivary prote 98.1 0.0034 1.1E-07 72.9 32.6 252 825-1150 26-342 (381)
189 3amr_A 3-phytase; beta-propell 98.1 0.00048 1.7E-08 78.6 24.6 178 1065-1256 48-262 (355)
190 2ojh_A Uncharacterized protein 98.1 0.00027 9.2E-09 78.5 22.6 219 1013-1246 54-292 (297)
191 3amr_A 3-phytase; beta-propell 98.0 0.00057 2E-08 77.9 23.7 147 1058-1213 88-265 (355)
192 2z3z_A Dipeptidyl aminopeptida 98.0 0.0041 1.4E-07 79.4 34.1 164 1046-1213 259-437 (706)
193 2ecf_A Dipeptidyl peptidase IV 98.0 0.0088 3E-07 76.7 37.0 361 468-908 38-463 (741)
194 1gxr_A ESG1, transducin-like e 97.9 0.017 5.9E-07 65.2 34.2 228 1013-1258 64-297 (337)
195 2hqs_A Protein TOLB; TOLB, PAL 97.8 0.0015 5.1E-08 77.9 24.9 180 1067-1258 159-345 (415)
196 1r5m_A SIR4-interacting protei 97.8 0.048 1.7E-06 63.7 37.9 332 825-1211 46-425 (425)
197 3no2_A Uncharacterized protein 97.8 0.0013 4.4E-08 73.8 22.7 188 751-949 5-200 (276)
198 4a2l_A BT_4663, two-component 97.8 0.14 4.7E-06 66.3 45.3 467 707-1258 98-615 (795)
199 3azo_A Aminopeptidase; POP fam 97.8 0.0013 4.4E-08 83.4 25.4 200 1046-1258 131-370 (662)
200 3ojy_B Complement component C8 97.8 5.6E-06 1.9E-10 101.1 3.1 33 18-50 69-101 (537)
201 1apq_A Complement protease C1R 97.8 8.4E-06 2.9E-10 66.5 3.1 40 392-431 3-52 (53)
202 3ojy_A Complement component C8 97.7 7.6E-06 2.6E-10 99.9 2.2 36 14-50 65-100 (554)
203 1gxr_A ESG1, transducin-like e 97.7 0.02 6.9E-07 64.7 30.9 191 1046-1254 143-334 (337)
204 4gqb_B Methylosome protein 50; 97.7 0.0058 2E-07 70.8 26.3 234 1011-1257 92-331 (344)
205 3pe7_A Oligogalacturonate lyas 97.7 0.002 7E-08 75.2 22.6 202 1049-1258 85-330 (388)
206 3mkq_A Coatomer beta'-subunit; 97.7 0.3 1E-05 62.9 45.7 197 740-945 15-218 (814)
207 2z3z_A Dipeptidyl aminopeptida 97.7 0.002 6.8E-08 82.3 23.6 201 1047-1258 183-436 (706)
208 3zwl_B Eukaryotic translation 97.6 0.07 2.4E-06 60.9 34.0 214 1014-1246 46-280 (369)
209 3pe7_A Oligogalacturonate lyas 97.6 0.0034 1.2E-07 73.3 23.0 182 1067-1257 168-384 (388)
210 2aq5_A Coronin-1A; WD40 repeat 97.5 0.038 1.3E-06 64.9 30.6 201 1045-1258 82-300 (402)
211 4aez_A CDC20, WD repeat-contai 97.5 0.11 3.9E-06 60.8 34.2 226 1014-1258 106-337 (401)
212 3ow8_A WD repeat-containing pr 97.5 0.079 2.7E-06 60.3 31.8 212 1046-1277 82-296 (321)
213 1r5m_A SIR4-interacting protei 97.5 0.14 4.8E-06 59.7 34.4 320 782-1168 46-425 (425)
214 2pm9_A Protein WEB1, protein t 97.5 0.0063 2.2E-07 71.5 22.6 230 1024-1268 47-302 (416)
215 4g56_B MGC81050 protein; prote 97.4 0.0097 3.3E-07 69.1 22.7 199 1046-1257 141-343 (357)
216 1apq_A Complement protease C1R 97.4 5.7E-05 1.9E-09 61.5 2.2 41 969-1009 4-52 (53)
217 3c5m_A Oligogalacturonate lyas 97.4 0.0041 1.4E-07 72.7 18.8 200 1050-1258 86-330 (396)
218 2xyi_A Probable histone-bindin 97.3 0.019 6.5E-07 68.4 24.6 201 1046-1257 183-410 (430)
219 3ei3_B DNA damage-binding prot 97.3 0.025 8.6E-07 65.8 24.9 198 1046-1258 75-283 (383)
220 3azo_A Aminopeptidase; POP fam 97.3 0.0059 2E-07 77.3 20.1 164 1054-1218 88-281 (662)
221 4a2l_A BT_4663, two-component 97.3 0.97 3.3E-05 58.3 42.9 465 706-1258 52-572 (795)
222 2xyi_A Probable histone-bindin 97.3 0.024 8.3E-07 67.5 24.3 201 1046-1257 130-353 (430)
223 3ei3_B DNA damage-binding prot 97.3 0.24 8.1E-06 57.3 32.5 188 1013-1211 87-282 (383)
224 3v9f_A Two-component system se 97.2 1 3.5E-05 57.9 43.0 189 1046-1258 408-612 (781)
225 2vdu_B TRNA (guanine-N(7)-)-me 97.2 0.11 3.6E-06 62.2 29.6 197 1045-1258 150-394 (450)
226 3o4h_A Acylamino-acid-releasin 97.2 0.0057 2E-07 76.1 18.7 193 1047-1258 24-228 (582)
227 3o4h_A Acylamino-acid-releasin 97.2 0.0049 1.7E-07 76.7 17.9 191 1046-1255 66-274 (582)
228 3v9f_A Two-component system se 97.2 1.1 3.8E-05 57.5 46.9 432 740-1257 164-656 (781)
229 4aez_A CDC20, WD repeat-contai 97.2 0.099 3.4E-06 61.3 28.4 198 1046-1258 178-381 (401)
230 2pm9_A Protein WEB1, protein t 97.2 0.021 7.1E-07 67.0 22.0 237 1014-1258 81-338 (416)
231 2vdu_B TRNA (guanine-N(7)-)-me 97.1 0.095 3.2E-06 62.6 28.2 195 1046-1255 104-337 (450)
232 1xfd_A DIP, dipeptidyl aminope 97.1 0.32 1.1E-05 61.8 34.6 356 784-1200 19-430 (723)
233 2ynn_A Coatomer subunit beta'; 97.1 0.2 6.9E-06 56.1 29.0 207 1046-1269 15-226 (304)
234 3c5m_A Oligogalacturonate lyas 97.1 0.16 5.5E-06 58.8 28.7 167 740-910 189-390 (396)
235 3odt_A Protein DOA1; ubiquitin 97.1 0.19 6.5E-06 55.8 28.2 209 1045-1277 60-272 (313)
236 4ery_A WD repeat-containing pr 97.1 0.31 1E-05 54.6 30.1 196 1046-1258 25-224 (312)
237 1sq9_A Antiviral protein SKI8; 97.1 0.16 5.4E-06 59.0 28.3 201 1045-1258 122-396 (397)
238 3ow8_A WD repeat-containing pr 97.1 0.16 5.6E-06 57.6 27.7 191 1047-1254 125-318 (321)
239 4ery_A WD repeat-containing pr 97.1 0.6 2.1E-05 52.1 32.8 206 1046-1270 67-278 (312)
240 2gop_A Trilobed protease; beta 97.0 0.08 2.8E-06 60.4 24.9 155 1045-1212 59-253 (347)
241 3t5o_A Complement component C6 97.0 0.0004 1.4E-08 90.7 5.5 37 58-95 118-154 (913)
242 1vyh_C Platelet-activating fac 97.0 0.34 1.2E-05 57.0 30.8 242 1014-1277 122-386 (410)
243 1erj_A Transcriptional repress 97.0 0.32 1.1E-05 56.8 30.4 211 1047-1277 126-358 (393)
244 3hxj_A Pyrrolo-quinoline quino 97.0 0.034 1.2E-06 62.9 21.3 177 1056-1258 107-284 (330)
245 2xdw_A Prolyl endopeptidase; a 97.0 0.15 5.1E-06 65.0 29.5 199 1047-1258 127-369 (710)
246 1got_B GT-beta; complex (GTP-b 97.0 0.66 2.3E-05 52.8 32.3 204 1046-1269 99-310 (340)
247 1k8k_C P40, ARP2/3 complex 41 97.0 0.15 5.1E-06 58.4 26.9 212 1047-1277 11-250 (372)
248 2ynn_A Coatomer subunit beta'; 96.9 0.45 1.5E-05 53.2 29.7 214 1046-1277 57-276 (304)
249 3hxj_A Pyrrolo-quinoline quino 96.9 0.029 1E-06 63.5 19.3 173 1057-1254 148-321 (330)
250 1xfd_A DIP, dipeptidyl aminope 96.9 0.029 9.9E-07 71.6 21.1 198 1047-1256 116-394 (723)
251 3f1s_B Vitamin K-dependent pro 96.9 0.00051 1.7E-08 77.4 4.0 41 969-1009 2-43 (283)
252 4gqb_B Methylosome protein 50; 96.9 0.19 6.6E-06 57.7 26.2 198 1047-1258 85-290 (344)
253 1k8k_C P40, ARP2/3 complex 41 96.8 0.32 1.1E-05 55.6 27.7 195 1046-1257 54-274 (372)
254 1nr0_A Actin interacting prote 96.8 1.8 6.2E-05 53.7 52.4 468 709-1257 32-522 (611)
255 1sq9_A Antiviral protein SKI8; 96.8 0.41 1.4E-05 55.3 28.9 235 1013-1268 27-330 (397)
256 4a9v_A PHOX; hydrolase, beta-p 96.8 0.016 5.4E-07 69.9 16.0 114 1088-1202 383-553 (592)
257 2xdw_A Prolyl endopeptidase; a 96.7 0.15 5.3E-06 64.9 26.6 222 1024-1258 153-415 (710)
258 2gop_A Trilobed protease; beta 96.7 0.091 3.1E-06 59.9 22.1 154 1045-1212 15-209 (347)
259 2aq5_A Coronin-1A; WD40 repeat 96.6 0.3 1E-05 57.1 26.0 197 1049-1258 39-255 (402)
260 3vl1_A 26S proteasome regulato 96.6 0.64 2.2E-05 54.2 28.8 226 1013-1258 69-323 (420)
261 1yfq_A Cell cycle arrest prote 96.6 0.18 6.2E-06 56.9 23.2 193 1045-1258 57-283 (342)
262 1yr2_A Prolyl oligopeptidase; 96.6 0.12 4.2E-06 66.2 24.1 220 1024-1258 191-442 (741)
263 4a11_B DNA excision repair pro 96.6 0.41 1.4E-05 55.3 26.5 159 1045-1212 100-277 (408)
264 1vyh_C Platelet-activating fac 96.5 0.62 2.1E-05 54.7 28.1 216 1046-1277 110-344 (410)
265 2w2n_E LDL receptor, low-densi 96.5 0.00042 1.4E-08 65.4 0.0 43 388-430 64-107 (107)
266 4g56_B MGC81050 protein; prote 96.5 0.067 2.3E-06 61.9 18.9 216 1045-1277 43-275 (357)
267 3jrp_A Fusion protein of prote 96.5 0.68 2.3E-05 52.8 27.5 199 1046-1258 57-288 (379)
268 4a11_B DNA excision repair pro 96.5 0.2 6.9E-06 58.0 23.2 200 1046-1258 45-277 (408)
269 4e54_B DNA damage-binding prot 96.5 0.044 1.5E-06 65.3 17.5 199 1046-1258 121-328 (435)
270 3zwl_B Eukaryotic translation 96.4 1.7 5.9E-05 49.0 42.4 162 1046-1211 177-346 (369)
271 3i2n_A WD repeat-containing pr 96.4 0.47 1.6E-05 53.7 25.4 230 1013-1258 81-354 (357)
272 4a5s_A Dipeptidyl peptidase 4 96.4 1.5 5.2E-05 55.9 32.6 164 1046-1213 261-451 (740)
273 3iuj_A Prolyl endopeptidase; h 96.4 0.43 1.5E-05 60.6 26.8 166 1047-1219 236-413 (693)
274 2pbi_B Guanine nucleotide-bind 96.3 2.2 7.5E-05 48.7 31.6 214 1046-1277 108-332 (354)
275 3t5o_A Complement component C6 96.3 0.0022 7.5E-08 83.8 5.0 32 18-50 121-152 (913)
276 3i2n_A WD repeat-containing pr 96.3 0.25 8.6E-06 56.0 22.1 202 1046-1258 20-244 (357)
277 3f1s_B Vitamin K-dependent pro 96.3 0.0017 5.8E-08 73.1 3.4 41 663-704 2-43 (283)
278 3frx_A Guanine nucleotide-bind 96.3 0.96 3.3E-05 50.9 26.8 196 1046-1258 67-268 (319)
279 1aut_L Activated protein C; se 96.3 0.0017 5.9E-08 62.0 2.8 39 394-432 55-95 (114)
280 3odt_A Protein DOA1; ubiquitin 96.2 1.3 4.3E-05 48.9 27.2 221 1014-1258 73-297 (313)
281 1szb_A Mannose binding lectin- 96.2 0.0017 5.7E-08 67.1 2.7 40 392-431 123-167 (170)
282 1aut_L Activated protein C; se 96.2 0.0017 5.9E-08 62.1 2.5 41 969-1009 54-94 (114)
283 1nr0_A Actin interacting prote 96.2 3.9 0.00013 50.6 49.6 311 781-1149 18-343 (611)
284 3vl1_A 26S proteasome regulato 96.2 2.7 9.3E-05 48.7 36.6 330 783-1149 58-407 (420)
285 2w2n_E LDL receptor, low-densi 96.2 0.0018 6.1E-08 61.1 2.3 40 392-432 28-69 (107)
286 3jrp_A Fusion protein of prote 96.1 1.1 3.8E-05 50.9 26.7 199 1046-1258 13-241 (379)
287 4a5s_A Dipeptidyl peptidase 4 96.1 0.21 7.2E-06 64.0 22.3 199 1046-1258 113-401 (740)
288 3iuj_A Prolyl endopeptidase; h 96.1 0.28 9.7E-06 62.3 23.3 198 1048-1258 178-406 (693)
289 1lmj_A Fibrillin 1; EGF, calci 96.1 0.0017 5.7E-08 58.7 1.7 42 389-430 42-86 (86)
290 3k26_A Polycomb protein EED; W 96.1 0.95 3.3E-05 51.2 25.5 198 1045-1258 70-319 (366)
291 1nzi_A Complement C1S componen 96.0 0.0026 8.8E-08 64.8 3.0 40 392-431 116-158 (159)
292 1z6c_A Vitamin K-dependent pro 95.9 0.0025 8.7E-08 57.6 2.0 44 388-431 40-85 (87)
293 2bkl_A Prolyl endopeptidase; m 95.9 0.63 2.2E-05 59.0 25.0 181 1024-1214 149-354 (695)
294 2pbi_B Guanine nucleotide-bind 95.9 1.4 4.8E-05 50.4 25.9 172 1047-1228 157-334 (354)
295 2c4f_L Coagulation factor VII 95.8 0.0032 1.1E-07 62.7 2.6 38 395-432 92-130 (142)
296 3mmy_A MRNA export factor; mRN 95.8 2.2 7.6E-05 48.0 27.2 117 1045-1169 40-161 (368)
297 3k26_A Polycomb protein EED; W 95.8 0.56 1.9E-05 53.2 22.1 158 1046-1211 20-192 (366)
298 2ad6_A Methanol dehydrogenase 95.8 5.5 0.00019 49.0 34.5 64 885-949 63-139 (571)
299 1szb_A Mannose binding lectin- 95.8 0.003 1E-07 65.1 2.3 41 969-1009 124-167 (170)
300 1yr2_A Prolyl oligopeptidase; 95.8 2.8 9.5E-05 53.5 30.5 196 1046-1255 164-393 (741)
301 1x7a_L Coagulation factor IX, 95.7 0.0032 1.1E-07 63.0 2.0 44 389-432 81-127 (146)
302 3frx_A Guanine nucleotide-bind 95.7 2.6 8.8E-05 47.3 26.8 197 1047-1258 20-228 (319)
303 3f3f_A Nucleoporin SEH1; struc 95.7 1.3 4.3E-05 49.4 24.2 199 1046-1258 13-250 (351)
304 4e54_B DNA damage-binding prot 95.7 1.1 3.6E-05 53.0 24.3 198 1004-1211 121-327 (435)
305 1x7a_L Coagulation factor IX, 95.6 0.0059 2E-07 61.1 3.4 42 969-1010 85-127 (146)
306 1z68_A Fibroblast activation p 95.6 0.082 2.8E-06 67.4 15.0 222 1021-1258 90-394 (719)
307 1z68_A Fibroblast activation p 95.4 3.3 0.00011 52.4 29.2 161 1046-1210 254-442 (719)
308 1z6c_A Vitamin K-dependent pro 95.4 0.0052 1.8E-07 55.5 1.9 42 392-433 2-46 (87)
309 3f3f_A Nucleoporin SEH1; struc 95.4 3 0.0001 46.3 25.7 189 1014-1211 25-249 (351)
310 1yfq_A Cell cycle arrest prote 95.3 0.92 3.2E-05 51.0 21.2 193 1046-1257 13-225 (342)
311 3gre_A Serine/threonine-protei 95.3 2.3 8E-05 49.7 25.5 239 1013-1269 77-368 (437)
312 1erj_A Transcriptional repress 95.2 6 0.00021 45.7 29.6 198 1046-1256 167-388 (393)
313 3mkq_A Coatomer beta'-subunit; 95.2 10 0.00035 48.3 61.0 358 467-903 14-385 (814)
314 3dm0_A Maltose-binding peripla 95.2 2.2 7.5E-05 53.8 26.4 198 1047-1258 385-593 (694)
315 1nfu_B Coagulation factor XA, 95.2 0.0057 1.9E-07 64.0 1.8 39 394-432 82-122 (195)
316 1uzk_A Fibrillin-1; glycoprote 95.2 0.0081 2.8E-07 61.3 2.9 41 390-430 119-162 (162)
317 2w86_A Fibrillin-1, fibrillin1 95.2 0.0054 1.8E-07 61.5 1.4 41 390-430 104-147 (147)
318 2ovr_B FBW7, F-BOX/WD repeat p 95.1 7 0.00024 45.8 29.2 224 1012-1268 129-356 (445)
319 2vh0_B Activated factor XA lig 95.1 0.0062 2.1E-07 60.0 1.7 39 394-432 82-122 (134)
320 4h5i_A Guanine nucleotide-exch 95.1 2.9 9.8E-05 48.1 24.9 197 1047-1257 136-343 (365)
321 2c4f_L Coagulation factor VII 95.1 0.0088 3E-07 59.5 2.7 39 972-1010 91-130 (142)
322 4a9v_A PHOX; hydrolase, beta-p 95.1 0.14 4.7E-06 61.9 13.4 112 507-619 381-553 (592)
323 3v7d_B Cell division control p 95.0 7.8 0.00027 45.6 31.9 229 1006-1258 126-382 (464)
324 2kl7_A Fibulin-4; secreted, ca 95.0 0.023 7.9E-07 48.9 4.6 24 392-415 2-29 (71)
325 3iz6_a 40S ribosomal protein R 94.9 2.9 0.0001 48.1 24.6 198 1047-1258 160-376 (380)
326 2vh0_B Activated factor XA lig 94.9 0.0071 2.4E-07 59.5 1.6 41 970-1010 82-122 (134)
327 3dw8_B Serine/threonine-protei 94.9 1.7 5.9E-05 50.9 22.9 200 1042-1257 26-315 (447)
328 1nfu_B Coagulation factor XA, 94.9 0.0069 2.4E-07 63.4 1.5 41 970-1010 82-122 (195)
329 3dwl_C Actin-related protein 2 94.9 0.16 5.6E-06 58.5 13.3 196 1047-1258 14-237 (377)
330 1got_B GT-beta; complex (GTP-b 94.9 6.6 0.00023 44.2 28.1 195 1046-1258 57-258 (340)
331 3iz6_a 40S ribosomal protein R 94.8 2.6 9E-05 48.6 23.7 160 1045-1213 206-377 (380)
332 3gre_A Serine/threonine-protei 94.8 3.5 0.00012 48.2 25.0 208 1046-1268 65-300 (437)
333 3fm0_A Protein CIAO1; WDR39,SG 94.7 3.3 0.00011 47.0 23.8 194 1047-1256 19-224 (345)
334 3dwl_C Actin-related protein 2 94.7 0.62 2.1E-05 53.5 17.7 173 1046-1228 57-259 (377)
335 1kb0_A Quinohemoprotein alcoho 94.7 3.2 0.00011 52.3 25.5 77 1183-1268 396-515 (677)
336 2xzm_R RACK1; ribosome, transl 94.6 6.1 0.00021 44.6 25.8 196 1047-1256 24-243 (343)
337 2bkl_A Prolyl endopeptidase; m 94.6 2.1 7.3E-05 54.0 23.9 194 1047-1255 123-349 (695)
338 3dm0_A Maltose-binding peripla 94.6 7.2 0.00025 49.0 28.7 196 1046-1258 432-633 (694)
339 1dx5_I Thrombomodulin; serine 94.6 0.0082 2.8E-07 57.7 0.9 42 388-429 75-118 (118)
340 2xe4_A Oligopeptidase B; hydro 94.6 1.3 4.4E-05 56.8 21.7 193 1047-1255 176-398 (751)
341 3q7m_A Lipoprotein YFGL, BAMB; 94.6 8.4 0.00029 44.0 37.3 173 1056-1254 188-375 (376)
342 1lmj_A Fibrillin 1; EGF, calci 94.5 0.007 2.4E-07 54.5 0.2 40 969-1008 46-86 (86)
343 1emn_A Fibrillin; extracellula 94.5 0.015 5E-07 51.9 2.3 40 391-432 3-44 (82)
344 1p22_A F-BOX/WD-repeat protein 94.5 6.1 0.00021 46.3 26.2 223 1006-1258 137-366 (435)
345 1emn_A Fibrillin; extracellula 94.5 0.016 5.5E-07 51.6 2.5 40 390-430 41-82 (82)
346 1uzk_A Fibrillin-1; glycoprote 94.4 0.017 5.8E-07 58.9 3.0 41 392-432 2-44 (162)
347 3v7d_B Cell division control p 94.4 10 0.00035 44.5 31.1 195 1046-1258 205-422 (464)
348 2xzm_R RACK1; ribosome, transl 94.4 5.7 0.0002 44.8 24.9 195 1046-1258 78-286 (343)
349 3dw8_B Serine/threonine-protei 94.3 5.8 0.0002 46.2 25.6 196 1046-1258 95-374 (447)
350 1nzi_A Complement C1S componen 94.3 0.015 5.3E-07 58.9 2.2 41 969-1009 117-158 (159)
351 3q7m_A Lipoprotein YFGL, BAMB; 94.2 9.9 0.00034 43.4 29.1 177 1056-1258 143-338 (376)
352 4aow_A Guanine nucleotide-bind 94.2 8.6 0.00029 42.6 26.9 199 1046-1258 40-247 (340)
353 2ovr_B FBW7, F-BOX/WD repeat p 94.1 10 0.00034 44.4 27.1 183 1049-1258 124-309 (445)
354 1p22_A F-BOX/WD-repeat protein 94.0 11 0.00039 43.9 27.1 192 1047-1268 136-333 (435)
355 2ad6_A Methanol dehydrogenase 94.0 11 0.00039 46.1 27.8 76 1183-1269 389-503 (571)
356 3jro_A Fusion protein of prote 94.0 1.9 6.5E-05 55.1 21.5 198 1046-1257 55-285 (753)
357 3jro_A Fusion protein of prote 93.9 2.2 7.6E-05 54.5 21.9 201 1046-1258 11-239 (753)
358 3mmy_A MRNA export factor; mRN 93.8 10 0.00036 42.3 29.2 143 781-931 39-187 (368)
359 4aow_A Guanine nucleotide-bind 93.6 11 0.00037 41.7 29.8 196 1046-1258 88-287 (340)
360 4gga_A P55CDC, cell division c 93.5 14 0.00048 42.9 31.5 244 1012-1277 116-370 (420)
361 1edm_B Factor IX; epidermal gr 93.5 0.041 1.4E-06 41.1 2.8 33 394-430 4-38 (39)
362 3h5c_B Vitamin K-dependent pro 93.4 0.042 1.4E-06 62.7 4.0 45 389-433 38-86 (317)
363 2oaj_A Protein SNI1; WD40 repe 93.4 4.9 0.00017 52.5 24.2 192 1046-1258 19-243 (902)
364 2w86_A Fibrillin-1, fibrillin1 93.1 0.019 6.5E-07 57.5 0.5 40 969-1008 107-147 (147)
365 3lrv_A PRE-mRNA-splicing facto 93.0 9.2 0.00031 43.0 23.1 157 1046-1212 127-293 (343)
366 2hes_X YDR267CP; beta-propelle 92.9 14 0.00049 41.2 25.6 198 1045-1258 59-281 (330)
367 1gl4_A Nidogen-1, entactin; im 92.4 0.032 1.1E-06 61.1 1.1 45 390-436 2-50 (285)
368 1dx5_I Thrombomodulin; serine 92.4 0.062 2.1E-06 51.5 2.9 32 392-423 3-35 (118)
369 2bou_A EGF-like module contain 92.2 0.068 2.3E-06 53.1 3.0 42 391-432 94-139 (143)
370 2oit_A Nucleoporin 214KDA; NH2 92.1 6.2 0.00021 46.6 20.8 199 1046-1257 94-333 (434)
371 1kb0_A Quinohemoprotein alcoho 92.1 9.7 0.00033 47.9 23.6 149 1056-1211 77-292 (677)
372 1kv9_A Type II quinohemoprotei 92.0 15 0.0005 46.1 25.1 67 1184-1258 385-489 (668)
373 2xe4_A Oligopeptidase B; hydro 91.5 4.3 0.00015 51.8 19.7 192 1055-1257 125-354 (751)
374 3lrv_A PRE-mRNA-splicing facto 91.4 20 0.00068 40.1 23.5 156 1089-1258 126-293 (343)
375 2kl7_A Fibulin-4; secreted, ca 91.1 0.12 4.1E-06 44.4 2.9 39 969-1008 3-70 (71)
376 1tl2_A L10, protein (tachylect 90.7 2.3 8E-05 44.9 12.9 149 1044-1210 40-209 (236)
377 1egf_A Epidermal growth factor 90.7 0.18 6.2E-06 40.5 3.5 31 394-431 12-44 (53)
378 1yiq_A Quinohemoprotein alcoho 90.0 41 0.0014 42.2 26.4 56 1202-1268 455-513 (689)
379 4h5i_A Guanine nucleotide-exch 89.9 30 0.001 39.2 26.3 175 1090-1283 135-323 (365)
380 2hes_X YDR267CP; beta-propelle 89.9 28 0.00096 38.7 24.5 195 1047-1257 17-230 (330)
381 2oit_A Nucleoporin 214KDA; NH2 89.8 7.3 0.00025 46.0 18.3 160 1048-1216 40-228 (434)
382 1a3p_A Epidermal growth factor 89.5 0.28 9.7E-06 37.8 3.7 30 394-430 9-40 (45)
383 2pm7_B Protein transport prote 89.5 27 0.00093 38.1 28.5 203 1046-1258 11-239 (297)
384 3u7u_G Neuregulin 1; signaling 89.5 0.23 7.8E-06 40.2 3.2 34 393-430 13-48 (55)
385 2pm7_B Protein transport prote 89.5 27 0.00093 38.1 28.0 191 1014-1211 23-238 (297)
386 3zwu_A Alkaline phosphatase PH 89.0 5.4 0.00018 48.9 16.4 114 1088-1202 383-553 (592)
387 2k2s_B Micronemal protein 6; m 88.7 0.12 4.2E-06 42.8 1.1 25 404-431 26-50 (61)
388 3bg1_A Protein SEC13 homolog; 88.3 13 0.00045 41.2 18.3 203 1046-1257 15-247 (316)
389 3fm0_A Protein CIAO1; WDR39,SG 88.0 38 0.0013 37.9 27.8 200 1046-1258 107-336 (345)
390 1nql_B Epidermal growth factor 88.0 0.31 1.1E-05 39.2 3.0 32 393-430 11-43 (53)
391 1tl2_A L10, protein (tachylect 87.7 24 0.00081 37.3 17.8 147 1087-1256 39-209 (236)
392 3b7f_A Glycosyl hydrolase, BNR 87.6 17 0.00058 42.0 19.2 210 1047-1279 117-390 (394)
393 3h5c_B Vitamin K-dependent pro 87.1 0.29 1E-05 55.5 3.4 42 969-1010 43-85 (317)
394 2j04_A TAU60, YPL007P, hypothe 87.1 58 0.002 39.6 23.4 157 1044-1218 85-261 (588)
395 3vu4_A KMHSV2; beta-propeller 86.9 45 0.0015 37.5 25.6 192 1046-1268 21-235 (355)
396 1hae_A Heregulin-alpha; growth 86.7 0.44 1.5E-05 39.7 3.4 34 393-430 11-46 (63)
397 1k36_A Epiregulin; EGF-like fo 86.6 0.33 1.1E-05 37.7 2.3 33 393-431 11-43 (46)
398 1w6s_A Methanol dehydrogenase 86.0 73 0.0025 39.1 27.4 74 1183-1268 396-511 (599)
399 4ggc_A P55CDC, cell division c 85.2 45 0.0016 36.0 32.2 244 1012-1277 36-290 (318)
400 1kv9_A Type II quinohemoprotei 84.5 52 0.0018 41.0 22.5 109 1056-1171 66-191 (668)
401 2bou_A EGF-like module contain 83.9 0.32 1.1E-05 48.1 1.4 40 970-1009 97-138 (143)
402 2j04_A TAU60, YPL007P, hypothe 83.3 36 0.0012 41.4 19.1 183 1044-1258 52-255 (588)
403 1z1y_A Ookinete surface protei 82.1 0.37 1.3E-05 50.0 1.1 38 394-431 97-136 (186)
404 3ott_A Two-component system se 81.3 1.2E+02 0.0042 38.1 26.8 219 1011-1258 31-261 (758)
405 3bg1_A Protein SEC13 homolog; 80.7 55 0.0019 36.0 18.9 199 1046-1256 59-292 (316)
406 1gl4_A Nidogen-1, entactin; im 80.4 0.35 1.2E-05 52.9 0.2 44 969-1014 5-50 (285)
407 3dem_A Complement factor MAsp- 79.7 0.8 2.7E-05 50.8 2.8 35 398-432 131-165 (278)
408 2j04_B YDR362CP, TAU91; beta p 79.6 34 0.0012 41.3 17.6 155 1046-1211 268-428 (524)
409 3b7f_A Glycosyl hydrolase, BNR 79.5 68 0.0023 36.7 19.7 134 1091-1228 234-390 (394)
410 4gq1_A NUP37; propeller, trans 77.2 1E+02 0.0035 35.0 20.3 74 1046-1120 138-218 (393)
411 3sbq_A Nitrous-oxide reductase 77.1 87 0.003 37.7 18.9 71 1089-1167 323-407 (638)
412 4gga_A P55CDC, cell division c 76.8 1.1E+02 0.0038 35.0 27.2 197 1047-1258 192-396 (420)
413 2oaj_A Protein SNI1; WD40 repe 76.8 1.8E+02 0.0062 37.5 49.7 152 740-905 19-183 (902)
414 1nt0_A MAsp2, mannose-binding 76.5 0.93 3.2E-05 50.5 2.1 35 399-433 131-165 (286)
415 1yo8_A Thrombospondin-2; EGF, 76.0 1.5 5E-05 54.0 3.8 36 388-423 39-82 (634)
416 3u7u_G Neuregulin 1; signaling 76.0 1.2 4.2E-05 35.9 2.1 43 1286-1331 11-53 (55)
417 1sqj_A OXG-RCBH, oligoxylogluc 75.9 1.2E+02 0.004 38.7 21.8 163 1045-1217 15-207 (789)
418 1yiq_A Quinohemoprotein alcoho 75.2 1.7E+02 0.0059 36.4 24.5 77 1159-1245 455-536 (689)
419 1flg_A Protein (quinoprotein e 75.1 1.6E+02 0.0054 35.9 23.5 75 1184-1269 416-525 (582)
420 4gq1_A NUP37; propeller, trans 74.6 1.2E+02 0.0042 34.4 23.4 105 1057-1167 101-217 (393)
421 3ca7_A Protein spitz; argos, E 73.8 1.7 5.6E-05 34.6 2.3 34 393-430 13-47 (52)
422 3sbq_A Nitrous-oxide reductase 73.6 1.1E+02 0.0036 37.0 18.4 195 1055-1257 141-408 (638)
423 1w6s_A Methanol dehydrogenase 73.1 1.8E+02 0.0061 35.6 25.0 67 1056-1123 62-144 (599)
424 3zwu_A Alkaline phosphatase PH 72.9 25 0.00087 42.9 13.6 107 737-844 382-550 (592)
425 2vj3_A Neurogenic locus notch 72.7 1.9 6.5E-05 42.0 3.0 30 392-421 4-37 (135)
426 2cn3_A Xyloglucanase, beta-1,4 72.0 1E+02 0.0035 38.8 19.8 192 1046-1255 24-281 (737)
427 1tpg_A T-plasminogen activator 71.3 2 6.9E-05 38.6 2.6 23 404-430 61-85 (91)
428 1sqj_A OXG-RCBH, oligoxylogluc 71.0 1.9E+02 0.0065 36.6 22.1 163 1046-1218 65-276 (789)
429 1egf_A Epidermal growth factor 70.7 3 0.0001 33.3 3.2 33 1289-1329 12-46 (53)
430 2hz6_A Endoplasmic reticulum t 69.5 5 0.00017 46.2 6.2 176 1056-1258 9-193 (369)
431 1z1y_A Ookinete surface protei 68.5 2.3 7.7E-05 44.0 2.6 34 394-428 140-176 (186)
432 1nt0_A MAsp2, mannose-binding 68.3 1.7 5.9E-05 48.3 1.8 41 969-1009 120-163 (286)
433 3a0f_A Xyloglucanase; beta-pro 67.9 1E+02 0.0034 39.1 18.4 165 1041-1217 17-219 (763)
434 1edm_B Factor IX; epidermal gr 67.2 3.5 0.00012 30.3 2.7 32 1287-1326 7-38 (39)
435 1a3p_A Epidermal growth factor 67.1 2.8 9.6E-05 32.1 2.2 34 1289-1329 9-43 (45)
436 3dem_A Complement factor MAsp- 66.9 1.9 6.4E-05 47.7 1.7 42 969-1010 121-165 (278)
437 2j04_B YDR362CP, TAU91; beta p 65.2 1.6E+02 0.0056 35.2 18.8 194 1047-1255 210-426 (524)
438 2k2s_B Micronemal protein 6; m 64.2 1.6 5.5E-05 36.0 0.4 19 982-1000 26-44 (61)
439 4d90_A EGF-like repeat and dis 63.2 4 0.00014 39.9 3.2 36 392-431 96-133 (143)
440 1yo8_A Thrombospondin-2; EGF, 63.0 3.8 0.00013 50.4 3.5 33 969-1001 44-82 (634)
441 1iox_A Betacellulin; EGF-like 61.5 6.5 0.00022 30.9 3.4 33 392-430 12-44 (50)
442 1hae_A Heregulin-alpha; growth 59.6 4.6 0.00016 33.4 2.4 42 1286-1330 9-50 (63)
443 3ltf_D Protein spitz; receptor 59.1 4.3 0.00015 33.1 2.0 33 394-430 14-47 (58)
444 3vu4_A KMHSV2; beta-propeller 56.6 2.4E+02 0.0082 31.3 24.6 187 1048-1258 62-272 (355)
445 1g1s_A P-selectin; selectin, l 56.5 6 0.00021 39.5 3.1 31 394-431 125-155 (162)
446 4ggc_A P55CDC, cell division c 55.0 2.2E+02 0.0075 30.3 32.9 157 1046-1209 152-313 (318)
447 3e50_C Protransforming growth 52.5 9 0.00031 30.1 2.8 32 393-430 13-44 (50)
448 4d90_A EGF-like repeat and dis 52.4 7.8 0.00027 37.7 3.1 35 392-430 51-94 (143)
449 2vj3_A Neurogenic locus notch 51.8 6.7 0.00023 38.0 2.5 31 969-999 5-37 (135)
450 1q4g_A Prostaglandin G/H synth 51.6 6 0.0002 48.1 2.5 32 393-431 7-40 (553)
451 3f6k_A Sortilin; protein sorti 49.3 2.4E+02 0.0083 35.0 16.4 93 1092-1197 93-193 (685)
452 1nql_B Epidermal growth factor 48.2 5.6 0.00019 31.7 1.0 37 1286-1329 9-46 (53)
453 1n1i_A Merozoite surface prote 48.1 7.8 0.00027 35.3 2.0 30 1289-1319 51-83 (105)
454 1xdt_R Hbegf, heparin-binding 47.7 6.8 0.00023 33.9 1.5 32 393-430 45-76 (79)
455 1k36_A Epiregulin; EGF-like fo 46.4 10 0.00034 29.2 2.2 33 1288-1327 11-43 (46)
456 3nt1_A Prostaglandin-endoperox 44.7 8.1 0.00028 47.1 2.1 32 393-431 6-39 (587)
457 1tpg_A T-plasminogen activator 43.3 17 0.00058 32.4 3.6 38 1287-1330 52-89 (91)
458 2rnl_A Amphiregulin; AR, color 42.5 21 0.0007 28.1 3.4 32 393-430 17-48 (50)
459 1flg_A Protein (quinoprotein e 41.8 5.4E+02 0.018 31.0 26.6 64 1056-1123 68-140 (582)
460 2xbg_A YCF48-like protein; pho 35.6 4.7E+02 0.016 28.6 23.8 186 1047-1255 124-320 (327)
461 2fd6_A Urokinase-type plasmino 35.4 22 0.00076 33.7 3.2 29 395-430 2-33 (122)
462 2cn3_A Xyloglucanase, beta-1,4 34.3 5.2E+02 0.018 32.2 16.8 122 468-591 24-170 (737)
463 4aqb_A Mannan-binding lectin s 32.6 19 0.00064 41.2 2.6 35 398-432 131-165 (361)
464 3asi_A Neurexin-1-alpha; beta- 32.3 1.4E+02 0.0046 34.5 10.1 32 394-432 191-223 (410)
465 1ob1_C Major merozoite surface 31.8 17 0.00058 32.8 1.5 30 1289-1319 47-82 (99)
466 1n1i_A Merozoite surface prote 30.2 21 0.00072 32.5 1.9 40 664-703 51-94 (105)
467 1b9w_A Protein (merozoite surf 29.5 22 0.00075 31.6 1.8 31 1288-1319 46-78 (95)
468 2zuy_A YESX protein; beta-prop 27.9 8.7E+02 0.03 29.3 16.6 118 491-615 274-411 (620)
469 3a0f_A Xyloglucanase; beta-pro 27.2 8.6E+02 0.029 30.3 17.1 188 1047-1255 546-760 (763)
470 3qcw_A Neurexin-1-alpha; synap 27.1 1.3E+02 0.0044 40.5 9.7 37 982-1022 203-240 (1245)
471 2ygo_A WIF-1, WNT inhibitory f 26.7 24 0.0008 36.0 1.7 34 395-432 145-181 (188)
472 2zux_A YESW protein; beta-prop 25.5 9.4E+02 0.032 28.9 15.4 117 493-616 272-408 (591)
473 3ott_A Two-component system se 24.9 1E+03 0.036 29.2 48.7 187 1046-1258 374-587 (758)
474 2vj2_A Jagged-1; signalling, p 24.9 45 0.0015 33.4 3.5 23 404-430 145-168 (169)
475 3ii7_A Kelch-like protein 7; p 24.6 6.5E+02 0.022 26.7 22.2 185 1056-1258 55-273 (306)
476 1bx7_A Hirustasin; anti-coagul 24.1 77 0.0026 24.9 3.7 39 55-96 7-47 (55)
477 1g1s_A P-selectin; selectin, l 23.6 27 0.00091 34.6 1.5 32 969-1009 124-155 (162)
478 3bg4_D Guamerin; chymotrypsin, 23.1 70 0.0024 25.1 3.3 38 55-95 13-52 (57)
479 1xip_A Nucleoporin NUP159; bet 21.3 9.3E+02 0.032 27.3 15.4 137 1015-1174 51-200 (388)
480 3qcw_A Neurexin-1-alpha; synap 20.2 1.4E+02 0.0047 40.2 7.8 34 394-431 191-227 (1245)
481 1ob1_C Major merozoite surface 20.2 40 0.0014 30.4 1.7 31 664-694 47-83 (99)
482 4asc_A Kelch repeat and BTB do 20.1 8.1E+02 0.028 26.1 19.9 132 1099-1244 97-250 (315)
483 1eja_B Bdellastasin; complex ( 20.0 54 0.0018 26.1 2.1 39 55-96 11-51 (59)
No 1
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=4.6e-98 Score=942.95 Aligned_cols=594 Identities=32% Similarity=0.574 Sum_probs=544.2
Q ss_pred CCccceEeeccceeEEEecCCCCCcceeeecccccceeEEeecCCCceEEEEecCCCceEEEecCCCCceEEEeCCCCCc
Q psy5806 705 NPSKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMVASVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVVNDLNRT 784 (1332)
Q Consensus 705 ~~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~~~~p 784 (1332)
.|++||+|+++.+|++++++... ...++|++++.++.+||||+.+++|||+|...+.|+|+.++|+..++++..++..|
T Consensus 4 ~p~~~Ll~s~~~~I~~i~l~~~~-~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P 82 (628)
T 4a0p_A 4 VPEAFLLFSRRADIRRISLETNN-NNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYP 82 (628)
T ss_dssp -CCCEEEEEETTEEEEEESSCTT-CEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred CCCcEEEEEeCCcEEEEECCCCC-cceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCc
Confidence 47899999999999999998754 34567888899999999999999999999999999999999999999999899999
Q ss_pred cceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCCc
Q psy5806 785 ESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNR 864 (1332)
Q Consensus 785 ~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~ 864 (1332)
.|||+||.+++|||+|...++|++++++|+.+++++...+..|++|||||.+|+|||+||+.. ++|+|+.|||+++
T Consensus 83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~----~~I~r~~~dG~~~ 158 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGK----PKIDRAAMDGSER 158 (628)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSS----CEEEEEETTSCSC
T ss_pred ceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCC----CEEEEEeCCCCce
Confidence 999999999999999999999999999999999998888999999999999999999999876 8999999999999
Q ss_pred EEEecccccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEeccCCcceEEEEeCCEEEEEeCCCCEEEEEECCC
Q psy5806 865 AVFETEVIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYAVQSHPYTLTVLDYYVYWTDVQHSKIYRANKYD 944 (1332)
Q Consensus 865 ~~l~~~l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~~~~~P~~la~~~~~iywtD~~~~~i~~~~~~~ 944 (1332)
+++++.+.+|+||++|+.+ ++|||+|+..++|++++++|..++++...+.||+||++++++|||+||.+++|.+++|.+
T Consensus 159 ~~l~~~~~~P~GlalD~~~-~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~t 237 (628)
T 4a0p_A 159 TTLVPNVGRANGLTIDYAK-RRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTS 237 (628)
T ss_dssp EEEECSCSSEEEEEEETTT-TEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred EEEECCCCCcceEEEcccc-CEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCC
Confidence 9999889999999999998 999999999999999999999998777789999999999999999999999999999998
Q ss_pred C---eEEEeeee--cCcceEEeccccCCCCCcccCCCCCCccccccCC-CCccccCCCCeeEccCCccccccCcceEEEE
Q psy5806 945 V---KDIVEFAQ--VDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNP-TNFTCACPTGILLSADRRSCFSRTREFLLYT 1018 (1332)
Q Consensus 945 g---~~i~~~~~--~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p-~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~ 1018 (1332)
| +++..++. ++|+ +|++..+.+ .|+|+.+||+|+|||+++| ++|+|+||.||.|..|+++|.+ +++||||+
T Consensus 238 g~~~~~l~~~~~~p~~i~-v~~~~~q~~-~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~-~~~~Ll~s 314 (628)
T 4a0p_A 238 GQNRTIIQGHLDYVMDIL-VFHSSRQSG-WNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA-PTTFLLFS 314 (628)
T ss_dssp CCSCEEEECSCCSCCEEE-EECGGGSCC-CCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEEC-CSSEEEEE
T ss_pred CCceEEEecCCCCcceee-eeeeccccc-ceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCcc-ccceeeee
Confidence 8 66766654 8999 998765555 8999999999999999999 7799999999999999999995 68999999
Q ss_pred eecceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeec------CCCCce
Q psy5806 1019 SRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLM------NDTIRD 1092 (1332)
Q Consensus 1019 ~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~------~~~~p~ 1092 (1332)
++.. |+++.++.......++|+++++++.+||||+.+++|||+|...++|++++++ |+..+.++.. ++..|+
T Consensus 315 ~~~~-i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~-g~~~~~v~~~~~~~~~~~~~p~ 392 (628)
T 4a0p_A 315 QKSA-INRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQED-GSQGFTVVVSSVPSQNLEIQPY 392 (628)
T ss_dssp ETTE-EEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEEC--------CCCEE
T ss_pred ccce-EEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcC-CCCceEEEEcccccccccCCcc
Confidence 9999 9999998766666788999999999999999999999999999999999987 7776666644 567899
Q ss_pred eeEEEecCCeEEEEcCCCceEEEEeeCCceEEE-EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCC-cEEEEecCCCc
Q psy5806 1093 NFVIDWVANNIYYIDSQMHTINVARSDGQHKKI-LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTT-KIEKVYLDGSY 1170 (1332)
Q Consensus 1093 glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~-~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~-~I~r~~ldG~~ 1170 (1332)
||||||++++|||+|...++|++++++|+.+.+ +..++..|++|||||.+|+||||||+. .+ +|+|++|||+.
T Consensus 393 glAvD~~~~nLY~td~~~~~I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~-----~~~~I~r~~~dG~~ 467 (628)
T 4a0p_A 393 DLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQE-----RSPKIERAALDGTE 467 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEET-----TEEEEEEEETTSCS
T ss_pred eEEeeccCCeEEEEcCCCCEEEEEECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCC-----CCCeEEEEeCCCCC
Confidence 999999999999999999999999999998877 556789999999999999999999987 33 89999999999
Q ss_pred eEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECCCC
Q psy5806 1171 RTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAM 1248 (1332)
Q Consensus 1171 ~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~ 1248 (1332)
+++|+.+++.+|+||+||+++++|||+|+..++|+++++||+.|+++.. +.+|+|||+ ++++||||||.++
T Consensus 468 ~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~~~~~~~~P~glav-------~~~~ly~tD~~~~ 540 (628)
T 4a0p_A 468 REVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTV-------FENWLYWIDKQQQ 540 (628)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCEEEEEE-------ETTEEEEEETTTT
T ss_pred cEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEEEcCCCCCcEEEEE-------ECCEEEEEECCCC
Confidence 9999998899999999999999999999999999999999999999985 899999999 9999999999999
Q ss_pred EEEEEEecCCCCcceEEEEecCCCCeeeEEEEeCCCC--CCCCCCCCCCCCCCccceeccCCCCceeeCCCCCC---CCc
Q psy5806 1249 SVVIAREKSDTGQWDVHLIRSNQEDFLNIKAISASKQ--LTWNPCAQDNGGCSHLCFYKGRTKGYVCGCPDDLE---PNE 1323 (1332)
Q Consensus 1249 ~V~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~q--~~~n~C~~~ng~C~~lC~~~~~~~~~~C~C~~~~~---~~~ 1323 (1332)
+|++++|.+| ++.++++.++..+++|++++...+ .+.|||..+||+|+|||++.+ .+.++|+||+||+ ++.
T Consensus 541 ~i~~~~k~~G---~~~~~i~~~~~~~~~i~~~~~~~~~~~~~n~c~~~ng~C~~~C~~~~-~~~~~C~C~~g~~l~~d~~ 616 (628)
T 4a0p_A 541 MIEKIDMTGR---EGRTKVQARIAQLSDIHAVKELNLQEYRQHPCAQDNGGCSHICLVKG-DGTTRCSCPMHLVLLQDEL 616 (628)
T ss_dssp EEEEEETTSS---SCCEEEECCCTTEEEEEEECCCCHHHHHHSTTTTGGGGCSSEEEECT-TSCEEEECCTTEEECTTSS
T ss_pred eEEEEECcCC---CCcEEEeccCCCCcceEEEeecccCccccccCCCCCCCcchhcccCC-CCCeeeeCCCCCEECCCCC
Confidence 9999999999 788899999999999999987654 478999999999999999983 4568999999983 333
Q ss_pred cc
Q psy5806 1324 EC 1325 (1332)
Q Consensus 1324 ~c 1325 (1332)
+|
T Consensus 617 ~~ 618 (628)
T 4a0p_A 617 SC 618 (628)
T ss_dssp CE
T ss_pred cC
Confidence 66
No 2
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=3e-96 Score=926.04 Aligned_cols=593 Identities=34% Similarity=0.670 Sum_probs=529.2
Q ss_pred ccceEeeccceeEEEecCCCCCcceeeecccccceeEEeecCCCceEEEEecCCCceEEEecCCCCc-eEEEeCCCCCcc
Q psy5806 707 SKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMVASVDVDTKNEYIYWSDISEKTIERVRFDMTGR-ERLVVNDLNRTE 785 (1332)
Q Consensus 707 ~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~-~~vi~~~~~~p~ 785 (1332)
.+.|+++++.+|++++++... ....++++++.++.+||||+.+++|||+|...+.|+|+.++|+.. ++++..++..|.
T Consensus 9 ~~~~~~~~~~~I~~i~~~~~~-~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~ 87 (619)
T 3s94_A 9 APLLLYANRRDLRLVDATNGK-ENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD 87 (619)
T ss_dssp -CCEEEECSSBEEEECCC----------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEE
T ss_pred CceEEEeccccEEEEeCCCCc-ceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcC
Confidence 568999999999999998642 134556778999999999999999999999999999999999863 677888899999
Q ss_pred ceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcE
Q psy5806 786 SIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRA 865 (1332)
Q Consensus 786 glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~ 865 (1332)
|||+||++++|||+|...++|++.+++|+.+++++...+..|++|||||.+|+||||||+.. ++|+|+.|||+.++
T Consensus 88 GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~----~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 88 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEV----PKIERAGMDGSSRF 163 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSS----CEEEEEETTSCSCE
T ss_pred eEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCC----CEEEEEECCCCceE
Confidence 99999999999999999999999999999999998888999999999999999999999977 89999999999999
Q ss_pred EEecc-cccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEec-cCCcceEEEEeCCEEEEEeCCCCEEEEEECC
Q psy5806 866 VFETE-VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYA-VQSHPYTLTVLDYYVYWTDVQHSKIYRANKY 943 (1332)
Q Consensus 866 ~l~~~-l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~-~~~~P~~la~~~~~iywtD~~~~~i~~~~~~ 943 (1332)
+++.. +.+|+||++|+.+ ++|||+|...++|++++++|..++.+.. .+.||+||++++++|||+||.+++|.+++|.
T Consensus 164 ~l~~~~~~~P~Glald~~~-~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~ 242 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEE-QKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKY 242 (619)
T ss_dssp EEECSSCSSEEEEEEETTT-TEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESS
T ss_pred EEEeCCCCCCcEEEEEccC-CEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECC
Confidence 99876 9999999999998 9999999999999999999999988876 7899999999999999999999999999999
Q ss_pred CC---eEEEeee--ecCcceEEecc-ccCCCCCcccCCCCCCccccccCCC--CccccCCCCeeEccCCccccccCcceE
Q psy5806 944 DV---KDIVEFA--QVDRPWLVRAA-QNISFPNACGSNNGGCSHLCLRNPT--NFTCACPTGILLSADRRSCFSRTREFL 1015 (1332)
Q Consensus 944 ~g---~~i~~~~--~~~i~~~~~~~-~~~~~~n~C~~~nGgCshlCl~~p~--~~~C~Cp~g~~l~~d~~tC~~~p~~~l 1015 (1332)
+| +++..++ |++|+ ++++. ||.+ .|||+.+||+|||||+++|. +|+|+||.||.|..|+++|...+++||
T Consensus 243 tg~~~~~i~~~~~~p~~i~-v~~~~~qp~~-~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~L 320 (619)
T 3s94_A 243 TGEGLREIHSDIFSPMDIH-AFSQQRQPNA-TNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELL 320 (619)
T ss_dssp SCCCCEECCSCCCCCSEEE-ECCGGGSCCC-CCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEE
T ss_pred CCcccEEEecCCCCCcEEE-EEccccCCCc-cccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEE
Confidence 88 4555444 38888 88764 6666 99999999999999999985 599999999999999999998789999
Q ss_pred EEEeecceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeE
Q psy5806 1016 LYTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFV 1095 (1332)
Q Consensus 1016 l~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glA 1095 (1332)
||+++.. |++|+++.......++|++++.++.+||||+.+++|||+|...++|++++++ |+..++++..++..|+|||
T Consensus 321 l~~~~~~-i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~-g~~~~~v~~~~~~~p~GlA 398 (619)
T 3s94_A 321 LLARRTD-LRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFID-GSGSQFVVTAQIAHPDGIA 398 (619)
T ss_dssp EEEESSC-EEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECSSCSCCCEEE
T ss_pred EEEcccc-eEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcC-CCccEEEEECCCCCcCceE
Confidence 9999999 9999999887777788999999999999999999999999999999999988 7777888878889999999
Q ss_pred EEecCCeEEEEcCCCceEEEEeeCCceEEE-EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEE
Q psy5806 1096 IDWVANNIYYIDSQMHTINVARSDGQHKKI-LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVL 1174 (1332)
Q Consensus 1096 vDw~~~~LY~td~~~~~I~v~~ldG~~~~~-~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l 1174 (1332)
|||++++|||||...++|++++++|+.+++ +..++..|++|||||.+|+||||||+. .++|+|+.|||+.++++
T Consensus 399 vD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~-----~~~I~r~~~dG~~~~~l 473 (619)
T 3s94_A 399 VDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGE-----IPKIERAALDGSDRVVL 473 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEEE
T ss_pred EecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCC-----CCEEEEEccCCCccEEE
Confidence 999999999999999999999999998877 456889999999999999999999986 58999999999999999
Q ss_pred EecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEE
Q psy5806 1175 VEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVI 1252 (1332)
Q Consensus 1175 ~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~ 1252 (1332)
+.+.+.+|+|||||+++++|||+|+..++|++++++|..+++++. +.+|+|||+ ++++||||||.+++|++
T Consensus 474 ~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav-------~~~~ly~tD~~~~~I~~ 546 (619)
T 3s94_A 474 VNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTL-------LGDYVYWTDWQRRSIER 546 (619)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECCCCSSCCEEE-------ETTEEEEECTTSSCEEE
T ss_pred EeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccCCCCcEEEEE-------ECCEEEEeecCCCeEEE
Confidence 988899999999999999999999999999999999999988876 899999999 99999999999999999
Q ss_pred EEecCCCCcceEEEEecCCCCeeeEEEEeCCCCCCCCCCCCCCCCCCccceeccCCCCceeeCCCCCC---CCccccc
Q psy5806 1253 AREKSDTGQWDVHLIRSNQEDFLNIKAISASKQLTWNPCAQDNGGCSHLCFYKGRTKGYVCGCPDDLE---PNEECFE 1327 (1332)
Q Consensus 1253 ~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~q~~~n~C~~~ng~C~~lC~~~~~~~~~~C~C~~~~~---~~~~c~~ 1327 (1332)
++|.+| +.++++.+++.+++|++++...|.+.|||+.+||+|+|+|++. +++++|+||.||. ++-+|.+
T Consensus 547 ~~k~~g----~~~~~~~~~~~~~~i~~~~~~~~~~~~~C~~~ng~C~~~C~~~--~~~~~C~C~~g~~l~~d~~~C~~ 618 (619)
T 3s94_A 547 VHKRSA----EREVIIDQLPDLMGLKATNVHRVIGSNPCAEENGGCSHLCLYR--PQGLRCACPIGFELISDMKTCIV 618 (619)
T ss_dssp EESSSC----CEEEEECSCCCEEEEEEEESSCCCCCCGGGSGGGGCSSEEEEE--TTEEEEECCTTCEECSSTTCEEC
T ss_pred EEcCCC----ceEEEecCCCCCceeeecccccccccccCCCCCCChhHhhccC--CCCeEEECCCCCEECCCCCcCCC
Confidence 999998 3577888999999999999988889999999999999999998 5679999999993 3347854
No 3
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=9.4e-96 Score=921.93 Aligned_cols=567 Identities=33% Similarity=0.614 Sum_probs=519.5
Q ss_pred CccceeEeeecccccccccCCCCCceeeEEeeeeccceEEEEEEccCCeEEEEcCCCceEEEEEecCcceEEEEeCCCCC
Q psy5806 432 SPEELLIYARQKDLRISQLTEPSPTFETVLPVMNVKSVVAIAWESANDSLYWADVENGEINRAHINGTFQYNVIRHNTKK 511 (1332)
Q Consensus 432 ~~~~~ll~~~~~~i~~~~l~~~~~~~~~~~p~~~~~~~~~i~~d~~~~~lywsD~~~~~I~r~~~~g~~~~~v~~~~~~~ 511 (1332)
.|++||||+++++|+.++|+.... ...+|+.+++++.+||||+.+++|||+|...++|+|+.++|+..++++..++..
T Consensus 4 ~p~~~Ll~s~~~~I~~i~l~~~~~--~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~ 81 (628)
T 4a0p_A 4 VPEAFLLFSRRADIRRISLETNNN--NVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY 81 (628)
T ss_dssp -CCCEEEEEETTEEEEEESSCTTC--EEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSC
T ss_pred CCCcEEEEEeCCcEEEEECCCCCc--ceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCC
Confidence 578899999999999999986543 567888889999999999999999999999999999999999999999989999
Q ss_pred CccEEEeccCCeEEEEeCCCCeEEEEeCCCCCcEEEEeCCCCCceEEEEecCCCeEEEEecCCCCceEEEcCCCCceEEE
Q psy5806 512 PAGVAIDWRTNKLYWTESEYNWIEVSNLDGTYPTLLFWQNLSEPRDIAVNPIGGIMYWCSWGDLHKIEMAGMDGSHRHIL 591 (1332)
Q Consensus 512 p~glAvDw~~~~lYw~d~~~~~I~v~~l~g~~~~~l~~~~~~~P~~iavdp~~G~lywtd~g~~~~I~r~~~dG~~~~~l 591 (1332)
|.||||||++++|||+|...++|++++++|+.+++|+...+..|++|||||.+|+|||||||..++|+|+.|||+.++++
T Consensus 82 P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l 161 (628)
T 4a0p_A 82 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTL 161 (628)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE
T ss_pred cceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEE
Confidence 99999999999999999999999999999999999998899999999999999999999999889999999999999998
Q ss_pred EeCCCCCceeeEEeccCCeEEEEeCCCCeEEEEecCCCceEEEEe-ecc---eEE-------------------------
Q psy5806 592 ASDSLKNPTGLAIDLENSRLYWANVGLKTIEFTNLDGTRKQTLIA-LHH---LKV------------------------- 642 (1332)
Q Consensus 592 ~~~~l~~p~glaiD~~~~rLYw~d~~~~~I~~~~~dG~~~~~~~~-~~~---l~v------------------------- 642 (1332)
+. .+.+|+||+||+.+++|||+|+..+.|++++++|+.++++.. ++| |++
T Consensus 162 ~~-~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 162 VP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp EC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCS
T ss_pred EC-CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCCc
Confidence 85 789999999999999999999999999999999999977665 555 655
Q ss_pred ----EeeecCceeEEEEeCCCCcCcCCCcCCCCCCccccccCCCCCceeeCCCCccccCCCCccccCCccceEeecccee
Q psy5806 643 ----MTKVVGLTDIDIFHRRRSKKTHPCNENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSENPSKFLLVSQTDKI 718 (1332)
Q Consensus 643 ----~~~~~~~~~i~v~~~~~q~~~~pC~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~ll~s~~~~i 718 (1332)
...+..|++|++||+.+|+..|||..+||+|+|||++.|.++|+|+||.||.|.+|+++|.+ +++||+|+++..|
T Consensus 241 ~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~-~~~~Ll~s~~~~i 319 (628)
T 4a0p_A 241 RTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA-PTTFLLFSQKSAI 319 (628)
T ss_dssp CEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEEC-CSSEEEEEETTEE
T ss_pred eEEEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCcc-ccceeeeeccceE
Confidence 11234689999999999999999999999999999999955999999999999999999996 6899999999999
Q ss_pred EEEecCCCCCcceeeecccccceeEEeecCCCceEEEEecCCCceEEEecCCCCceEEEeC------CCCCccceeEecC
Q psy5806 719 RQISLDVEYRYPIVLPLRQLKMVASVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVVN------DLNRTESIAVDAI 792 (1332)
Q Consensus 719 ~~i~l~~~~~~~~~~~~~~~~~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~------~~~~p~glAvD~~ 792 (1332)
+++.++.....+.++|+++++++.+||||+.+++|||+|...+.|+|+.++|+..++++.. ++..|+|||+||+
T Consensus 320 ~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~ 399 (628)
T 4a0p_A 320 NRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIY 399 (628)
T ss_dssp EEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETT
T ss_pred EEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeecc
Confidence 9999987655567888899999999999999999999999999999999999998887765 5779999999999
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCceEEEEecCCCCCeEEEEeCCCCeEEEEecccCcCCCC-ceEEEecCCCCcEEEecc-
Q psy5806 793 GRKIYWTDMNAQTIMVSDIDGKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNN-RIEMAHMDGTNRAVFETE- 870 (1332)
Q Consensus 793 ~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~-~I~r~~~dG~~~~~l~~~- 870 (1332)
++||||+|...++|++++++|+.+++++..++..|++|||||.+|+||||||+.+ + +|+|+.|||+++++|++.
T Consensus 400 ~~nLY~td~~~~~I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~----~~~I~r~~~dG~~~~~l~~~~ 475 (628)
T 4a0p_A 400 SRYIYWTCEATNVINVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQER----SPKIERAALDGTEREVLFFSG 475 (628)
T ss_dssp TTEEEEEETTTTEEEEEETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETT----EEEEEEEETTSCSCEEEECSS
T ss_pred CCeEEEEcCCCCEEEEEECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCC----CCeEEEEeCCCCCcEEEEecc
Confidence 9999999999999999999999999998888999999999999999999999876 4 899999999999999987
Q ss_pred cccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEec-cCCcceEEEEeCCEEEEEeCCCCEEEEEECCCC---e
Q psy5806 871 VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYA-VQSHPYTLTVLDYYVYWTDVQHSKIYRANKYDV---K 946 (1332)
Q Consensus 871 l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~-~~~~P~~la~~~~~iywtD~~~~~i~~~~~~~g---~ 946 (1332)
+.+|+||++|+.+ ++|||+|++.++|++++++|+.++++.. .+.||+||++++++|||+||.+++|++++|.+| +
T Consensus 476 l~~P~gla~D~~~-~~LYw~D~~~~~I~~~~~dG~~r~~~~~~~~~~P~glav~~~~ly~tD~~~~~i~~~~k~~G~~~~ 554 (628)
T 4a0p_A 476 LSKPIALALDSRL-GKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRT 554 (628)
T ss_dssp CSCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCEEEEEEETTEEEEEETTTTEEEEEETTSSSCCE
T ss_pred CCCccEEEEeCCC-CEEEEEeCCCCEEEEEeCCCCceEEEEcCCCCCcEEEEEECCEEEEEECCCCeEEEEECcCCCCcE
Confidence 9999999999998 9999999999999999999999999984 789999999999999999999999999999988 6
Q ss_pred EEEeeee--cCcceEEeccc--cCCCCCcccCCCCCCccccccCCCC-ccccCCCCeeEccCCccccc
Q psy5806 947 DIVEFAQ--VDRPWLVRAAQ--NISFPNACGSNNGGCSHLCLRNPTN-FTCACPTGILLSADRRSCFS 1009 (1332)
Q Consensus 947 ~i~~~~~--~~i~~~~~~~~--~~~~~n~C~~~nGgCshlCl~~p~~-~~C~Cp~g~~l~~d~~tC~~ 1009 (1332)
+|+.++. ++|. +++... +.+ .|||..+||||+|||++.|.+ ++|+||.||.|.+|+++|-.
T Consensus 555 ~i~~~~~~~~~i~-~~~~~~~~~~~-~n~c~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~~~~ 620 (628)
T 4a0p_A 555 KVQARIAQLSDIH-AVKELNLQEYR-QHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDELSCGG 620 (628)
T ss_dssp EEECCCTTEEEEE-EECCCCHHHHH-HSTTTTGGGGCSSEEEECTTSCEEEECCTTEEECTTSSCEEE
T ss_pred EEeccCCCCcceE-EEeecccCccc-cccCCCCCCCcchhcccCCCCCeeeeCCCCCEECCCCCcCCC
Confidence 6776654 6777 666432 234 899999999999999998875 89999999999999999974
No 4
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=1.6e-95 Score=919.29 Aligned_cols=567 Identities=38% Similarity=0.730 Sum_probs=513.5
Q ss_pred cceeEeeecccccccccCCCCCceeeEEeeeeccceEEEEEEccCCeEEEEcCCCceEEEEEecCcc-eEEEEeCCCCCC
Q psy5806 434 EELLIYARQKDLRISQLTEPSPTFETVLPVMNVKSVVAIAWESANDSLYWADVENGEINRAHINGTF-QYNVIRHNTKKP 512 (1332)
Q Consensus 434 ~~~ll~~~~~~i~~~~l~~~~~~~~~~~p~~~~~~~~~i~~d~~~~~lywsD~~~~~I~r~~~~g~~-~~~v~~~~~~~p 512 (1332)
.|+||++++++|+.++++.... +..+++.+++++.|||||+.+++|||+|...++|+|+.++|+. .++++..++..|
T Consensus 9 ~~~~~~~~~~~I~~i~~~~~~~--~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P 86 (619)
T 3s94_A 9 APLLLYANRRDLRLVDATNGKE--NATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSP 86 (619)
T ss_dssp -CCEEEECSSBEEEECCC-----------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCE
T ss_pred CceEEEeccccEEEEeCCCCcc--eEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCc
Confidence 4689999999999999976431 3466778899999999999999999999999999999999975 477888888999
Q ss_pred ccEEEeccCCeEEEEeCCCCeEEEEeCCCCCcEEEEeCCCCCceEEEEecCCCeEEEEecCCCCceEEEcCCCCceEEEE
Q psy5806 513 AGVAIDWRTNKLYWTESEYNWIEVSNLDGTYPTLLFWQNLSEPRDIAVNPIGGIMYWCSWGDLHKIEMAGMDGSHRHILA 592 (1332)
Q Consensus 513 ~glAvDw~~~~lYw~d~~~~~I~v~~l~g~~~~~l~~~~~~~P~~iavdp~~G~lywtd~g~~~~I~r~~~dG~~~~~l~ 592 (1332)
.||||||++++|||+|...++|++++++|+.+++|+...+..|++|||||.+|+||||||+..++|+|+.|||+.+++++
T Consensus 87 ~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~ 166 (619)
T 3s94_A 87 DGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII 166 (619)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred CeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEE
Confidence 99999999999999999999999999999999999988999999999999999999999998899999999999999999
Q ss_pred eCCCCCceeeEEeccCCeEEEEeCCCCeEEEEecCCCceEEEEe--ecc---eEE-------------------------
Q psy5806 593 SDSLKNPTGLAIDLENSRLYWANVGLKTIEFTNLDGTRKQTLIA--LHH---LKV------------------------- 642 (1332)
Q Consensus 593 ~~~l~~p~glaiD~~~~rLYw~d~~~~~I~~~~~dG~~~~~~~~--~~~---l~v------------------------- 642 (1332)
...+.+|+|||+|+.+++|||+|+..+.|+++++||+.++++.. ++| |++
T Consensus 167 ~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 167 NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSCCC
T ss_pred eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCcc
Confidence 88999999999999999999999999999999999999988865 544 555
Q ss_pred ----EeeecCceeEEEEeCCCCcC-cCCCcCCCCCCccccccCCC-CCceeeCCCCccccCCCCccccCCccceEeeccc
Q psy5806 643 ----MTKVVGLTDIDIFHRRRSKK-THPCNENNGGCSHLCLIAPK-DGIRCVCPAGNLLREDRRTCSENPSKFLLVSQTD 716 (1332)
Q Consensus 643 ----~~~~~~~~~i~v~~~~~q~~-~~pC~~~nggCs~lCl~~~~-~~~~C~Cp~g~~l~~d~~tC~~~~~~~ll~s~~~ 716 (1332)
......|++|++||+.+||. .|||..+||+|||||+++|. .+|+|+||.||+|.+|+++|...+++||+|+.+.
T Consensus 247 ~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~ 326 (619)
T 3s94_A 247 LREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRT 326 (619)
T ss_dssp CEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESS
T ss_pred cEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEccc
Confidence 11134689999999999995 89999999999999999985 3799999999999999999998889999999999
Q ss_pred eeEEEecCCCCCcceeeecccccceeEEeecCCCceEEEEecCCCceEEEecCCCCceEEEeCCCCCccceeEecCCCeE
Q psy5806 717 KIRQISLDVEYRYPIVLPLRQLKMVASVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVVNDLNRTESIAVDAIGRKI 796 (1332)
Q Consensus 717 ~i~~i~l~~~~~~~~~~~~~~~~~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~~~~p~glAvD~~~~nL 796 (1332)
.|++++++.+....+++|++++.++.+||||+.+++|||+|...+.|+|+.++|+..++++..++..|.||||||+++||
T Consensus 327 ~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~l 406 (619)
T 3s94_A 327 DLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNL 406 (619)
T ss_dssp CEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEE
T ss_pred ceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcE
Confidence 99999999887777888999999999999999999999999999999999999999999998899999999999999999
Q ss_pred EEEeCCCCeEEEEeCCCCceEEEEecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEecc-cccCc
Q psy5806 797 YWTDMNAQTIMVSDIDGKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFETE-VIWPS 875 (1332)
Q Consensus 797 YwtD~~~~~I~v~~ldG~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~~-l~~P~ 875 (1332)
||+|...++|++++++|+.+++++..++..|++|||||.+|+||||||+.. ++|+|+.|||+++.++++. +.+|+
T Consensus 407 Y~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~----~~I~r~~~dG~~~~~l~~~~l~~P~ 482 (619)
T 3s94_A 407 YWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEI----PKIERAALDGSDRVVLVNTSLGWPN 482 (619)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSS----CEEEEEETTSCSCEEEECSSCSCEE
T ss_pred EEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCC----CEEEEEccCCCccEEEEeCCCCCCe
Confidence 999999999999999999999999888999999999999999999999986 8999999999999999887 99999
Q ss_pred eeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEec-cCCcceEEEEeCCEEEEEeCCCCEEEEEECCCC--eEEEeee
Q psy5806 876 CLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYA-VQSHPYTLTVLDYYVYWTDVQHSKIYRANKYDV--KDIVEFA 952 (1332)
Q Consensus 876 gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~-~~~~P~~la~~~~~iywtD~~~~~i~~~~~~~g--~~i~~~~ 952 (1332)
||++|+.+ ++|||+|+..++|++++++|..++++.. .+.||+||++++++|||+||.+++|++++|.+| +++..++
T Consensus 483 GlalD~~~-~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g~~~~~~~~~ 561 (619)
T 3s94_A 483 GLALDYDE-GKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAEREVIIDQL 561 (619)
T ss_dssp EEEEETTT-TEEEEEETTTTEEEEEESSSCCCEEEEECCCCSSCCEEEETTEEEEECTTSSCEEEEESSSCCEEEEECSC
T ss_pred eeEEcccC-CEEEEEECCCCEEEEEecCCCceEEEeccCCCCcEEEEEECCEEEEeecCCCeEEEEEcCCCceEEEecCC
Confidence 99999988 9999999999999999999999988864 789999999999999999999999999999999 6777777
Q ss_pred e--cCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccc
Q psy5806 953 Q--VDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFS 1009 (1332)
Q Consensus 953 ~--~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~ 1009 (1332)
+ ++|+ +++..++.+ .|+|+.+||||+|+|+++|++++|+||.||.|..|+++|.+
T Consensus 562 ~~~~~i~-~~~~~~~~~-~~~C~~~ng~C~~~C~~~~~~~~C~C~~g~~l~~d~~~C~~ 618 (619)
T 3s94_A 562 PDLMGLK-ATNVHRVIG-SNPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV 618 (619)
T ss_dssp CCEEEEE-EEESSCCCC-CCGGGSGGGGCSSEEEEETTEEEEECCTTCEECSSTTCEEC
T ss_pred CCCceee-ecccccccc-cccCCCCCCChhHhhccCCCCeEEECCCCCEECCCCCcCCC
Confidence 6 8999 888776666 99999999999999999999999999999999999999984
No 5
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=8e-73 Score=724.84 Aligned_cols=333 Identities=32% Similarity=0.636 Sum_probs=295.0
Q ss_pred CCCCccccccCCCCCceeeCCCCccccCCCCccccC-CccceEeeccceeEEEecCCCCCcceeeecccccceeEEeecC
Q psy5806 670 NGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSEN-PSKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMVASVDVDT 748 (1332)
Q Consensus 670 nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~~-~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~~~id~d~ 748 (1332)
++.|+|+|+..++ +|+|.|+.||+|..++++|... +..+|+++.+..|+++.++..... .-+.++.++.+|+||.
T Consensus 358 ~~~C~~~C~n~~g-sy~C~C~~Gy~l~~~~~~C~~~~~~p~Ll~an~~~Ir~i~l~~~~~~---~l~~~~~~~~gl~~d~ 433 (791)
T 3m0c_C 358 PDTCSQLCVNLEG-GYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYT---SLIPNLRNVVALDTEV 433 (791)
T ss_dssp SSSCTTTCCBCSS-CBCCCCCSSEECCSSCCCCEETTSCCEEEEECBSSEEEECTTSCCCE---EEECSCSSEEEEEEET
T ss_pred CCCCCCeeecCCC-CceeecCCCCEeCCCCceeeecccccccccccccceeEeeccCCcce---eeecCCCceEEEeecc
Confidence 3468899999887 9999999999999999999753 567999999999999999865432 2234788999999999
Q ss_pred CCceEEEEecCCCceEEEecCCC----CceEEEeCCCCCccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEecCC
Q psy5806 749 KNEYIYWSDISEKTIERVRFDMT----GRERLVVNDLNRTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFWLNL 824 (1332)
Q Consensus 749 ~~~~lYwsD~~~~~I~r~~~~g~----~~~~vi~~~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~~~ 824 (1332)
.+++|||+|...+.|+++.++|. ..++++..++..|.||||||++++|||+|...++|++++++|+.+++++...+
T Consensus 434 ~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l 513 (791)
T 3m0c_C 434 ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENG 513 (791)
T ss_dssp TTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTT
T ss_pred cCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCC
Confidence 99999999999999999999984 45677777899999999999999999999999999999999999999998889
Q ss_pred CCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEecc-cccCceeEEeCCCCCeEEEEeCCCCeEEEEccC
Q psy5806 825 YRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFETE-VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLA 903 (1332)
Q Consensus 825 ~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~~-l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~d 903 (1332)
..|++|||||..|+|||+||+.. ++|+|+.|||+.+++++.. +.+|+||+||+.+ ++|||+|++..+|++++++
T Consensus 514 ~~P~gIaVDp~~g~LYwtD~g~~----~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~-~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 514 SKPRAIVVDPVHGFMYWTDWGTP----AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLS-GRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp CCEEEEEEETTTTEEEEEECSSS----CEEEEEETTSCCEEEEECSSCSCEEEEEEETTT-TEEEEEETTTTEEEEEETT
T ss_pred CCcceEEEecCCCCEEEecCCCC----CeEEEEecCCCceEEEEeCCCCCceEEEEecCC-CeEEEEeCCCCcEEEEecC
Confidence 99999999999999999999986 7999999999999999887 9999999999988 9999999999999999999
Q ss_pred CCceeEEec---cCCcceEEEEeCCEEEEEeCCCCEEEEEECCCC---eEEEeeee--cCcceEEecc-ccCCCCCcccC
Q psy5806 904 TGRAKRAYA---VQSHPYTLTVLDYYVYWTDVQHSKIYRANKYDV---KDIVEFAQ--VDRPWLVRAA-QNISFPNACGS 974 (1332)
Q Consensus 904 G~~~~~l~~---~~~~P~~la~~~~~iywtD~~~~~i~~~~~~~g---~~i~~~~~--~~i~~~~~~~-~~~~~~n~C~~ 974 (1332)
|..++++.. .+.+|++|++++++|||+||.+++|++++|.+| ++|..++. ++|. +|++. ||.. .|||+.
T Consensus 589 G~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P~~i~-v~h~~~Qp~~-~N~C~~ 666 (791)
T 3m0c_C 589 GGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMV-LFHNLTQPRG-VNWCER 666 (791)
T ss_dssp SCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEE-EESGGGSCCC-CCTTTS
T ss_pred CCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEeecCCCCceeEe-eeccccCCCC-CCcccc
Confidence 999998875 588999999999999999999999999999988 56666664 8998 88865 5666 999997
Q ss_pred ---CCCCCccccccCCC------CccccCCCCeeEccCCccccccCcc
Q psy5806 975 ---NNGGCSHLCLRNPT------NFTCACPTGILLSADRRSCFSRTRE 1013 (1332)
Q Consensus 975 ---~nGgCshlCl~~p~------~~~C~Cp~g~~l~~d~~tC~~~p~~ 1013 (1332)
+||||+||||+.|. +|+|+||.||.|..|+++|+..|++
T Consensus 667 ~~~~ng~CshlCl~~p~~~~~~~~~~C~Cp~g~~L~~d~~tC~~~~~~ 714 (791)
T 3m0c_C 667 TTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLTEAEA 714 (791)
T ss_dssp SSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEEC----
T ss_pred cCCCCcCcCeeecCCCCcCCCCCCceeECCCCCEECCCCCcCCCCCCc
Confidence 89999999999875 5899999999999999999977665
No 6
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=6.3e-70 Score=698.05 Aligned_cols=586 Identities=28% Similarity=0.565 Sum_probs=288.8
Q ss_pred ccccCCCCCceecCC-CCceEeCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEecCCCEEEeeeecCCCCCCCCCC
Q psy5806 10 VGYLQEIPQYKKCNR-TGACIPAQWQCDNEFDCEMGEDEMKCPQASPPKKCSPDEHRCTTGHCILKTWLCDGIPDCSLGE 88 (1332)
Q Consensus 10 ~~~~~c~~~~f~C~~-~~~Ci~~~~~CDg~~DC~dgsDE~~C~~~~~~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~Dgs 88 (1332)
|...+|.+.+|+|.+ .++|||..|+|||..||.|||||.+| ....|.+++|+|.+|+||+..|+|||..||.|||
T Consensus 60 C~~~~C~~~~f~C~~~~~~Ci~~~~~CDg~~dC~dgsDE~~C----~~~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~dgs 135 (791)
T 3m0c_C 60 CLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC----PPKTCSQDEFRCHDGKCISRQFVCDSDRDCLDGS 135 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCccCcCccccCCCCCCEeeccccCCCCcCcCCCcccCCc----cCccccCCeEECCCCCEECHHHcCCCcccCCCCc
Confidence 667789999999983 28999999999999999999999999 4568999999999999999999999999999999
Q ss_pred Ccccccc-cCCCCCccccCCCCCCCCcccCCCccCCCCceecCCCceecCCccccCCCCCCCCCCCCCCCcCCcCccccc
Q psy5806 89 DERNCNK-TCDAQKEFSCMKLAEPRPTEVGSNIKYFPLHTVRAPRKDCFSKKYLCDGKKHCPRGEEGPDERHCPKRVSLS 167 (1332)
Q Consensus 89 DE~~C~~-~C~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ci~~~~~Cdg~~dC~dg~de~d~~~C~~~~~~~ 167 (1332)
||.+|+. .|.+. +|+|.+ +.||+..|+|||..||.||+||.. ..|.......
T Consensus 136 DE~~C~~~~C~~~-~f~C~~-------------------------~~Ci~~~~~Cdg~~dC~dgsDE~~-~~C~~~~~~~ 188 (791)
T 3m0c_C 136 DEASCPVLTCGPA-SFQCNS-------------------------STCIPQLWACDNDPDCEDGSDEWP-QRCRGLYVFQ 188 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccc-eeccCC-------------------------CccccccccCCCCCcCCCCCCccc-ccCCCccccC
Confidence 9999976 49887 999977 359999999999999999999943 2564221100
Q ss_pred CcceeEEeecccceeEEeeeccceeEEEEEEEEEecccccCceeeecccCceeeecCCCCeEEEEcCCCCceEEEEeCCC
Q psy5806 168 NKKYTAIIRNLHNVLAVDYHYKKNLLVWNTHIVHTGMQSVGSLSVDWVHDFVFWTDTAARRVEFCDLDGKNRKILIANNI 247 (1332)
Q Consensus 168 ~~~~~~~~~~~~~~~a~d~~~~~~~iywsd~v~~~g~~~~~~lavDWi~~~lYw~d~~~~~I~v~~~dg~~~~~l~~~~~ 247 (1332)
... .......|.+.. |...+. .|+-+...- ..||+... +.
T Consensus 189 ~~~--------~~C~~~~f~C~~------------g~Ci~~----~~~CDg~~d-----------C~dgsDE~-----~C 228 (791)
T 3m0c_C 189 GDS--------SPCSAFEFHCLS------------GECIHS----SWRCDGGPD-----------CKDKSDEE-----NC 228 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCC--------CCCCCCcccccC------------Cceecc----ccccCCCCC-----------CCCCCCCC-----Cc
Confidence 000 000111121111 111111 122211100 11221100 00
Q ss_pred CCCceEEEcCCCCeEEEEecCCCCcee--------EecCCCCCcEEEecCCcc-CceeeeeecCCCeEEEEeCCCCeEEE
Q psy5806 248 DKPRAVIVHPRDAFVFWTDWGKTPKIE--------RVEMDGSNRKVILTENIF-WPNGLTIDFEEDRLYWTEAKHHFIES 318 (1332)
Q Consensus 248 ~~pr~iavdp~~g~~fwtd~g~~~~Ie--------ra~mdGs~~~~l~~~~~~-~p~gl~iD~~~~rlYw~D~~~~~i~~ 318 (1332)
.. ....|. .|=- .+..-|. ....||++.........- .|+.+. +
T Consensus 229 ~~---~~C~~~---~f~C--~~g~Ci~~~~~Cdg~~dC~dgsDE~~C~~~~~C~~~~~~~----------C--------- 281 (791)
T 3m0c_C 229 AV---ATCRPD---EFQC--SDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFK----------C--------- 281 (791)
T ss_dssp ----------------------------------------------------CCSTTCCC----------C---------
T ss_pred cc---cccCCC---ccee--cCCceEecceecCChhccccccccCcccccccccCCCccc----------c---------
Confidence 00 000000 0000 0000111 012344433221110000 000000 0
Q ss_pred EeCCCCcEEEEEcCCCCCceeEEEecCeeEeecCCCcc--eEEeeccc-CcceEEEecc--C--CCceeEEEecCCCCcc
Q psy5806 319 SDLDGSRRQQVITKGLPHPFGITLYEDFVFWTDWHTKS--ISSANKYT-GRNIKTVHSG--L--HFPMNIRSYHPHRQPN 391 (1332)
Q Consensus 319 ~~~dG~~~~~v~~~~~~~p~~l~~~~~~~ywtd~~~~~--i~~~~k~~-g~~~~~i~~~--~--~~p~~i~~~h~~~qp~ 391 (1332)
.+|. .+ .......-..+---++|..... +..+.... +-....+... + ..|.|.+. ...+.+.
T Consensus 282 --~~G~----Ci----~~~~~Cd~~~dC~dgsDe~~~~C~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l-~~g~~C~ 350 (791)
T 3m0c_C 282 --HSGE----CI----TLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCE 350 (791)
T ss_dssp --TTSC----CC----CSSCCSCSSCCSSSSCSCCCTTBSCCSTTTGGGGCSSEEEECSBSEEEECCTTCEE-ETTTEEE
T ss_pred --CCCc----cc----ccccccCCccccccccCccccccccccccccccCccccccCCCCCcccCCCCCCcc-CCCCccc
Confidence 0010 00 0000000000111112211100 00000000 0000111110 0 12333333 2345567
Q ss_pred ccccCC-CCcceeeeccCCCceEEeCCCCceecCCCCCcCCC-ccceeEeeecccccccccCCCCCceeeEEeeeeccce
Q psy5806 392 YQSHCA-PKVCSHICLPNKHRFTCQCPLGLTLSPDNKSCSES-PEELLIYARQKDLRISQLTEPSPTFETVLPVMNVKSV 469 (1332)
Q Consensus 392 ~~n~C~-~g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~~~-~~~~ll~~~~~~i~~~~l~~~~~~~~~~~p~~~~~~~ 469 (1332)
+.|+|. ++.|+|+|++.+++|+|.|+.||+|.+++++|++. ..++|+|+++..|+.+.++...+ ...+.+++++
T Consensus 351 dideC~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~~~p~Ll~an~~~Ir~i~l~~~~~----~~l~~~~~~~ 426 (791)
T 3m0c_C 351 DIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEY----TSLIPNLRNV 426 (791)
T ss_dssp CCCCCSSSSSCTTTCCBCSSCBCCCCCSSEECCSSCCCCEETTSCCEEEEECBSSEEEECTTSCCC----EEEECSCSSE
T ss_pred cCcccCCCCCCCCeeecCCCCceeecCCCCEeCCCCceeeecccccccccccccceeEeeccCCcc----eeeecCCCce
Confidence 899998 78999999999999999999999999999999864 45699999999999999976544 3334568899
Q ss_pred EEEEEEccCCeEEEEcCCCceEEEEEecCc----ceEEEEeCCCCCCccEEEeccCCeEEEEeCCCCeEEEEeCCCCCcE
Q psy5806 470 VAIAWESANDSLYWADVENGEINRAHINGT----FQYNVIRHNTKKPAGVAIDWRTNKLYWTESEYNWIEVSNLDGTYPT 545 (1332)
Q Consensus 470 ~~i~~d~~~~~lywsD~~~~~I~r~~~~g~----~~~~v~~~~~~~p~glAvDw~~~~lYw~d~~~~~I~v~~l~g~~~~ 545 (1332)
.||+||..+++|||+|...++|+|+.++|. ..++++..++..|.||||||++++|||+|...++|+|++++|+.++
T Consensus 427 ~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~ 506 (791)
T 3m0c_C 427 VALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK 506 (791)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE
T ss_pred EEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEE
Confidence 999999999999999999999999999984 5577888889999999999999999999999999999999999999
Q ss_pred EEEeCCCCCceEEEEecCCCeEEEEecCCCCceEEEcCCCCceEEEEeCCCCCceeeEEeccCCeEEEEeCCCCeEEEEe
Q psy5806 546 LLFWQNLSEPRDIAVNPIGGIMYWCSWGDLHKIEMAGMDGSHRHILASDSLKNPTGLAIDLENSRLYWANVGLKTIEFTN 625 (1332)
Q Consensus 546 ~l~~~~~~~P~~iavdp~~G~lywtd~g~~~~I~r~~~dG~~~~~l~~~~l~~p~glaiD~~~~rLYw~d~~~~~I~~~~ 625 (1332)
+|+...+..|++|||||..|+|||||||..++|+++.|||+.+++++...+.+|+|||||+.+++|||+|++.+.|++++
T Consensus 507 ~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d 586 (791)
T 3m0c_C 507 TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSID 586 (791)
T ss_dssp EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEe
Confidence 99988999999999999999999999998799999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEEEEe----ecc---eEE-----------------------------EeeecCceeEEEEeCCCCcC-cCCCcC
Q psy5806 626 LDGTRKQTLIA----LHH---LKV-----------------------------MTKVVGLTDIDIFHRRRSKK-THPCNE 668 (1332)
Q Consensus 626 ~dG~~~~~~~~----~~~---l~v-----------------------------~~~~~~~~~i~v~~~~~q~~-~~pC~~ 668 (1332)
++|+.+++++. ++| |++ ...+..|++|+|||+.+||. .|||..
T Consensus 587 ~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P~~i~v~h~~~Qp~~~N~C~~ 666 (791)
T 3m0c_C 587 VNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNWCER 666 (791)
T ss_dssp TTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEEESGGGSCCCCCTTTS
T ss_pred cCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEeecCCCCceeEeeeccccCCCCCCcccc
Confidence 99999999875 555 444 11234689999999999985 899987
Q ss_pred ---CCCCCccccccCCC-----CCceeeCCCCccccCCCCccccCCcc
Q psy5806 669 ---NNGGCSHLCLIAPK-----DGIRCVCPAGNLLREDRRTCSENPSK 708 (1332)
Q Consensus 669 ---~nggCs~lCl~~~~-----~~~~C~Cp~g~~l~~d~~tC~~~~~~ 708 (1332)
+||+||||||++|. .+|+|+||.||.|.+|+++|.+.+++
T Consensus 667 ~~~~ng~CshlCl~~p~~~~~~~~~~C~Cp~g~~L~~d~~tC~~~~~~ 714 (791)
T 3m0c_C 667 TTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLTEAEA 714 (791)
T ss_dssp SSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEEC----
T ss_pred cCCCCcCcCeeecCCCCcCCCCCCceeECCCCCEECCCCCcCCCCCCc
Confidence 89999999999874 27999999999999999999976554
No 7
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=3.8e-68 Score=680.76 Aligned_cols=331 Identities=32% Similarity=0.650 Sum_probs=287.6
Q ss_pred CCCccccccCCCCCceeeCCCCccccCCCCccccC-CccceEeeccceeEEEecCCCCCcceeeecccccceeEEeecCC
Q psy5806 671 GGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSEN-PSKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMVASVDVDTK 749 (1332)
Q Consensus 671 ggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~~-~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~~~id~d~~ 749 (1332)
+.|+|+|...++ +|+|.|+.||++..++++|... +..+|+++.+..|+++.++.... ..-+..+.++.+|+||+.
T Consensus 341 ~~C~~~C~n~~g-~y~C~C~~G~~~~~~~~~C~~~~~~~~ll~~~~~~I~~id~~~~~~---~~~~~~~~~p~gla~d~~ 416 (699)
T 1n7d_A 341 DTCSQLCVNLEG-GYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEY---TSLIPNLRNVVALDTEVA 416 (699)
T ss_dssp SSCTTTCCBCSS-CBCCCCCSSCBCCSSCCCCBCCSSCCCBCCCCTTC-CEECTTSCCE---ECCSCCCTTCCCCEEETT
T ss_pred CccccccccCCC-CeeeeeecccccCCCCCcccccccceeEEecCccceEEEeCCCCcc---eeeeccCcceEEEccccc
Confidence 458899999887 9999999999999999999843 57899999999999999986432 222346788999999999
Q ss_pred CceEEEEecCCCceEEEecCC----CCceEEEeCCCCCccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEecCCC
Q psy5806 750 NEYIYWSDISEKTIERVRFDM----TGRERLVVNDLNRTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFWLNLY 825 (1332)
Q Consensus 750 ~~~lYwsD~~~~~I~r~~~~g----~~~~~vi~~~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~~~~ 825 (1332)
+++|||+|...+.|+++.++| +..+.++..++..|.||||||.+++|||+|...++|.+++++|+.+++++...+.
T Consensus 417 ~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~ 496 (699)
T 1n7d_A 417 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGS 496 (699)
T ss_dssp TTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSC
T ss_pred cCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCC
Confidence 999999999999999999987 5556666667889999999999999999999999999999999999988877788
Q ss_pred CCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEecc-cccCceeEEeCCCCCeEEEEeCCCCeEEEEccCC
Q psy5806 826 RPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFETE-VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLAT 904 (1332)
Q Consensus 826 ~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~~-l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG 904 (1332)
.|++|||||..|+|||++++.. ++|+|+.|||+.+++++.. +.+|+||+||+.+ ++|||+|+..++|++++++|
T Consensus 497 ~P~giavDp~~g~ly~td~~~~----~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~-~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 497 KPRAIVVDPVHGFMYWTDWGTP----AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLS-GRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CCCCEECCSSSSCCEECCCSSS----CCEEBCCSSSCCCCEESCSSCSSCCCEEECTTT-CCEEEEETTTTEEEEECSSS
T ss_pred CcceEEEccCCCcEEEcccCCC----CeEEEEeCCCCCeeEEEeCCCCCccEEEEeccC-CEEEEEecCCCeEEEEccCC
Confidence 9999999999999999999875 7999999999999888866 9999999999998 89999999999999999999
Q ss_pred CceeEEec---cCCcceEEEEeCCEEEEEeCCCCEEEEEECCCCeEE---Eeee--ecCcceEEecc-ccCCCCCcccCC
Q psy5806 905 GRAKRAYA---VQSHPYTLTVLDYYVYWTDVQHSKIYRANKYDVKDI---VEFA--QVDRPWLVRAA-QNISFPNACGSN 975 (1332)
Q Consensus 905 ~~~~~l~~---~~~~P~~la~~~~~iywtD~~~~~i~~~~~~~g~~i---~~~~--~~~i~~~~~~~-~~~~~~n~C~~~ 975 (1332)
..++++.. .+.+|++|++++++|||+||.+++|.++++.+|+.+ ..++ |++|. ++++. ||.. .|||+.+
T Consensus 572 ~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~-v~~~~~qp~~-~n~C~~~ 649 (699)
T 1n7d_A 572 GNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMV-LFHQLTQPRG-VNWCERT 649 (699)
T ss_dssp SCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCC-BCSSSSSCCS-CCSSCSS
T ss_pred CceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEE-EeCcccCCCC-CCCcccc
Confidence 99988875 578999999999999999999999999999988433 3333 38888 77764 5666 8999997
Q ss_pred ---CCCCccccccCCC------CccccCCCCeeEccCCccccccCc
Q psy5806 976 ---NGGCSHLCLRNPT------NFTCACPTGILLSADRRSCFSRTR 1012 (1332)
Q Consensus 976 ---nGgCshlCl~~p~------~~~C~Cp~g~~l~~d~~tC~~~p~ 1012 (1332)
||||+||||++|. +|+|+||.||.|..|+++|++.|+
T Consensus 650 ~~~ng~Cs~lCl~~p~~~~~~~~~~C~Cp~g~~l~~d~~~C~~~~~ 695 (699)
T 1n7d_A 650 TLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLTEAE 695 (699)
T ss_dssp SCSSCSCTTCCBCCCCCTTCSCSCBCCCCSSCEECSSTTCEECC--
T ss_pred CCCCCCCCcccCcCcccCCCCCCcEEECcCCCEECCCCCccCCCCc
Confidence 9999999998762 599999999999999999997654
No 8
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=6.7e-65 Score=650.70 Aligned_cols=534 Identities=28% Similarity=0.583 Sum_probs=381.1
Q ss_pred ccccCCCCCceecCCCCceEeCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEecCCCEEEeeeecCCCCCCCCCCC
Q psy5806 10 VGYLQEIPQYKKCNRTGACIPAQWQCDNEFDCEMGEDEMKCPQASPPKKCSPDEHRCTTGHCILKTWLCDGIPDCSLGED 89 (1332)
Q Consensus 10 ~~~~~c~~~~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE~~C~~~~~~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsD 89 (1332)
|....|.+.+|+|. +++||+..|+|||..||.|||||.+| ....|.+.+|+|.+|.||+..|+|||..||.||||
T Consensus 83 C~~~~C~~~~f~C~-~g~Ci~~~~~Cdg~~dC~dgsDE~~C----~~~~C~~~~f~C~~~~Ci~~~~~Cdg~~dC~dgsD 157 (699)
T 1n7d_A 83 CPPKTCSQDEFRCH-DGKCISRQFVCDSDRDCLDGSDEASC----PVLTCGPASFQCNSSTCIPQLWACDNDPDCEDGSD 157 (699)
T ss_dssp CSSCCCCSSCCCSS-CC----CCCTTCSSCCSSSSCSSSSC----CCCCCCSSCCCCSSSCCCCTTSTTCSSCCSSSSSS
T ss_pred ccccccccCcEEcC-CCCEecHHHcCCCcCcCCCCCccCCc----CccccCccccCCCCCcccchhcccCCCCcCCCCcc
Confidence 55567999999998 89999999999999999999999999 45689999999999999999999999999999999
Q ss_pred c--ccccc---------cCCCCCccccCCCCCCCCcc----------cCCC--cc---CCCCceecCCCceecCCccccC
Q psy5806 90 E--RNCNK---------TCDAQKEFSCMKLAEPRPTE----------VGSN--IK---YFPLHTVRAPRKDCFSKKYLCD 143 (1332)
Q Consensus 90 E--~~C~~---------~C~~~~~~~C~~~~~~~~~~----------~~~~--~~---~~~~~~~~~~~~~Ci~~~~~Cd 143 (1332)
| .+|.. .|.+. +|.|.++ .|++.. .++. ++ .|+...+.+..+.||+..++||
T Consensus 158 E~~~~C~~~~~~~~~~~~C~~~-~f~C~~g-~Ci~~~~~CDg~~dC~dgsDE~~C~~~~C~~~~f~C~~g~Ci~~~~~Cd 235 (699)
T 1n7d_A 158 EWPQRCRGLYVFQGDSSPCSAF-EFHCLSG-ECIHSSWRCDGGPDCKDKSDEENCAVATCRPDEFQCSDGNCIHGSRQCD 235 (699)
T ss_dssp SSCSSSSCCCCCSSCCCCSCSS-SCCCSSS-CCCSTTCTTSSSCCSTTSCSSCSCCCCCCCSSEEESSSSCEEETTCCSS
T ss_pred cccccCCCcccccCCCCCCCCc-ceecCCC-ceEechhccCCCCCCCCCcccccCCCcccCCCcEecCCCceeeeecccC
Confidence 9 89963 48876 8999874 222211 0100 00 1222233333334555555555
Q ss_pred CCCCCCCCCCCCCCcCCcCcccc-cCcceeEEeecccceeEEeeeccceeEEEEEEEEEecccccCceeeecccCceeee
Q psy5806 144 GKKHCPRGEEGPDERHCPKRVSL-SNKKYTAIIRNLHNVLAVDYHYKKNLLVWNTHIVHTGMQSVGSLSVDWVHDFVFWT 222 (1332)
Q Consensus 144 g~~dC~dg~de~d~~~C~~~~~~-~~~~~~~~~~~~~~~~a~d~~~~~~~iywsd~v~~~g~~~~~~lavDWi~~~lYw~ 222 (1332)
|..||.||+|| ..|...... ...+|.+ .. |.. |...++.
T Consensus 236 g~~dC~dgsde---~~C~~~~~C~~~~~~~C---------------~~------------g~C----i~~~~~C------ 275 (699)
T 1n7d_A 236 REYDCKDMSDE---VGCVNVTLCEGPNKFKC---------------HS------------GEC----ITLDKVC------ 275 (699)
T ss_dssp SCCCSSSSCSS---SSTTCCCCCCSTTCCCC---------------TT------------SCC----CCSSCCS------
T ss_pred CCCCCCCCCcc---CCCCCCCcccCCCceec---------------CC------------CcE----eCCcccc------
Confidence 55555555555 233210000 0000000 00 000 0000000
Q ss_pred cCCCCeEEEEcCCCCceEEEEeCCCCCCceEEEcCCCCeEEEEecCCCCceeEecCCCCCcEEEecCCccCceeeeeecC
Q psy5806 223 DTAARRVEFCDLDGKNRKILIANNIDKPRAVIVHPRDAFVFWTDWGKTPKIERVEMDGSNRKVILTENIFWPNGLTIDFE 302 (1332)
Q Consensus 223 d~~~~~I~v~~~dg~~~~~l~~~~~~~pr~iavdp~~g~~fwtd~g~~~~Iera~mdGs~~~~l~~~~~~~p~gl~iD~~ 302 (1332)
|| .+...||++... . .. .+|
T Consensus 276 ------------d~-------------------------------------~~dC~dgsDe~~--~---~C----~~~-- 295 (699)
T 1n7d_A 276 ------------NM-------------------------------------ARDCRDWSDEPI--K---EC----GTN-- 295 (699)
T ss_dssp ------------CS-------------------------------------SCCSSSSCSCCC--S---SC----CCC--
T ss_pred ------------cc-------------------------------------cceecCcccccc--c---cc----ccc--
Confidence 00 001112221100 0 00 000
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCcEEEEEcCCCCCceeEEEecCeeEeecCCCcceEEeecccCcceEEEeccCCCceeEE
Q psy5806 303 EDRLYWTEAKHHFIESSDLDGSRRQQVITKGLPHPFGITLYEDFVFWTDWHTKSISSANKYTGRNIKTVHSGLHFPMNIR 382 (1332)
Q Consensus 303 ~~rlYw~D~~~~~i~~~~~dG~~~~~v~~~~~~~p~~l~~~~~~~ywtd~~~~~i~~~~k~~g~~~~~i~~~~~~p~~i~ 382 (1332)
|...-.|.-... .. + +...+. ...|.|.+
T Consensus 296 --------------eC~~~~~~C~~~----C~--------------------------~--~~~~~~-----C~C~~G~~ 324 (699)
T 1n7d_A 296 --------------ECLDNNGGCSHV----CN--------------------------D--LKIGYE-----CLCPDGFQ 324 (699)
T ss_dssp --------------CTTSSTTTSCTT----CC--------------------------C--CTTCCC-----CCCCSSSC
T ss_pred --------------cccccccCcCCC----cc--------------------------c--CCCCcE-----EeCCCCeE
Confidence 000000000000 00 0 000000 01122222
Q ss_pred EecCCCCccccccCC-CCcceeeeccCCCceEEeCCCCceecCCCCCcCCC-ccceeEeeecccccccccCCCCCceeeE
Q psy5806 383 SYHPHRQPNYQSHCA-PKVCSHICLPNKHRFTCQCPLGLTLSPDNKSCSES-PEELLIYARQKDLRISQLTEPSPTFETV 460 (1332)
Q Consensus 383 ~~h~~~qp~~~n~C~-~g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~~~-~~~~ll~~~~~~i~~~~l~~~~~~~~~~ 460 (1332)
. ...+.+...|+|. ++.|+|+|++.+++|+|.|+.||+|.+++++|++. ..++|||+++..|+.+.++.... .
T Consensus 325 ~-~~~~~C~dideC~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~~~~C~~~~~~~~ll~~~~~~I~~id~~~~~~----~ 399 (699)
T 1n7d_A 325 L-VAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEY----T 399 (699)
T ss_dssp C-CSSSCCCCCCCCSSSSSCTTTCCBCSSCBCCCCCSSCBCCSSCCCCBCCSSCCCBCCCCTTC-CEECTTSCCE----E
T ss_pred c-CCCCcccCccccCCCCccccccccCCCCeeeeeecccccCCCCCcccccccceeEEecCccceEEEeCCCCcc----e
Confidence 2 1234566789998 78999999999999999999999999999999865 45799999999999999876543 2
Q ss_pred EeeeeccceEEEEEEccCCeEEEEcCCCceEEEEEecC----cceEEEEeCCCCCCccEEEeccCCeEEEEeCCCCeEEE
Q psy5806 461 LPVMNVKSVVAIAWESANDSLYWADVENGEINRAHING----TFQYNVIRHNTKKPAGVAIDWRTNKLYWTESEYNWIEV 536 (1332)
Q Consensus 461 ~p~~~~~~~~~i~~d~~~~~lywsD~~~~~I~r~~~~g----~~~~~v~~~~~~~p~glAvDw~~~~lYw~d~~~~~I~v 536 (1332)
..+..+.++.+|+||+.+++|||+|...++|+++.++| +..++++..++..|.||||||.+++|||+|...++|.+
T Consensus 400 ~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v 479 (699)
T 1n7d_A 400 SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSV 479 (699)
T ss_dssp CCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEE
T ss_pred eeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEE
Confidence 23455778999999999999999999999999999997 55556666678899999999999999999999999999
Q ss_pred EeCCCCCcEEEEeCCCCCceEEEEecCCCeEEEEecCCCCceEEEcCCCCceEEEEeCCCCCceeeEEeccCCeEEEEeC
Q psy5806 537 SNLDGTYPTLLFWQNLSEPRDIAVNPIGGIMYWCSWGDLHKIEMAGMDGSHRHILASDSLKNPTGLAIDLENSRLYWANV 616 (1332)
Q Consensus 537 ~~l~g~~~~~l~~~~~~~P~~iavdp~~G~lywtd~g~~~~I~r~~~dG~~~~~l~~~~l~~p~glaiD~~~~rLYw~d~ 616 (1332)
++++|+.+++++..++..|++|||||..|+|||+||+..++|+++.|||+.+++++...+.+|+|||||+.+++|||+|+
T Consensus 480 ~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~ 559 (699)
T 1n7d_A 480 ADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 559 (699)
T ss_dssp EBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEET
T ss_pred EecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEec
Confidence 99999999998877899999999999999999999987789999999999999998888999999999999999999999
Q ss_pred CCCeEEEEecCCCceEEEEe----ecc---eEE-----------------E------------eeecCceeEEEEeCCCC
Q psy5806 617 GLKTIEFTNLDGTRKQTLIA----LHH---LKV-----------------M------------TKVVGLTDIDIFHRRRS 660 (1332)
Q Consensus 617 ~~~~I~~~~~dG~~~~~~~~----~~~---l~v-----------------~------------~~~~~~~~i~v~~~~~q 660 (1332)
..++|++++++|+.+++++. ++| |++ . ..+..|++|++||+.+|
T Consensus 560 ~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~~~~~q 639 (699)
T 1n7d_A 560 KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHQLTQ 639 (699)
T ss_dssp TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBCSSSSS
T ss_pred CCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEeCcccC
Confidence 99999999999999998864 344 555 0 01346899999999999
Q ss_pred cC-cCCCcCC---CCCCccccccCCC-----CCceeeCCCCccccCCCCccccCC
Q psy5806 661 KK-THPCNEN---NGGCSHLCLIAPK-----DGIRCVCPAGNLLREDRRTCSENP 706 (1332)
Q Consensus 661 ~~-~~pC~~~---nggCs~lCl~~~~-----~~~~C~Cp~g~~l~~d~~tC~~~~ 706 (1332)
|. .|||..+ ||+||||||++|. .+|+|+||.||+|.+|+++|++.+
T Consensus 640 p~~~n~C~~~~~~ng~Cs~lCl~~p~~~~~~~~~~C~Cp~g~~l~~d~~~C~~~~ 694 (699)
T 1n7d_A 640 PRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLTEA 694 (699)
T ss_dssp CCSCCSSCSSSCSSCSCTTCCBCCCCCTTCSCSCBCCCCSSCEECSSTTCEECC-
T ss_pred CCCCCCccccCCCCCCCCcccCcCcccCCCCCCcEEECcCCCEECCCCCccCCCC
Confidence 85 8999987 9999999998762 379999999999999999999653
No 9
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=3.7e-55 Score=516.63 Aligned_cols=338 Identities=31% Similarity=0.653 Sum_probs=298.5
Q ss_pred CcccCCCCCCccccccCCCCccccCCCCeeEccCCcccccc-CcceEEEEeecceEEEEeCCCCCCCCcccccCCccceE
Q psy5806 970 NACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSR-TREFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSSI 1048 (1332)
Q Consensus 970 n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~-p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~ 1048 (1332)
|+|+ +||+|+|+|.+++++|+|.|+.||.|..|+++|... +++||+|+.++. |++++++... ....++.+.+|.
T Consensus 2 ~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~~~~ll~~~~~~-I~~i~~~g~~---~~~~~~~~~~~~ 76 (349)
T 3v64_C 2 NECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRID-IRQVLPHRSE---YTLLLNNLENAI 76 (349)
T ss_dssp --------CCSSEECCC---CCEECCTTEEECTTSSCEEESSSCCEEEEECBSC-EEEECTTSCC---EEEEECSCSCEE
T ss_pred cccC-CCCCCcCeeecCCCCeEEECCCCccCCCCCCcccccccCceeEeecccc-eEEEeCCCCe---eEEeecCCCceE
Confidence 6898 789999999999999999999999999999999865 789999999999 9999987543 234456788899
Q ss_pred EEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEE-Ee
Q psy5806 1049 FFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKI-LV 1127 (1332)
Q Consensus 1049 ~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~-~~ 1127 (1332)
+|+||+.+++|||+|...++|++++++ |+..+.++..++..|.|||+||.+++|||+|...++|.+++++|+.+++ +.
T Consensus 77 ~l~~d~~~~~ly~~D~~~~~I~r~~~~-g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~ 155 (349)
T 3v64_C 77 ALDFHHRRELVFWSDVTLDRILRANLN-GSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW 155 (349)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred EEEEeccccEEEEEeccCCceEEEecC-CCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe
Confidence 999999999999999999999999988 6667777777888999999999999999999999999999999998777 44
Q ss_pred cCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEE
Q psy5806 1128 NDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYC 1207 (1332)
Q Consensus 1128 ~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~ 1207 (1332)
.++..|++|||||..|+|||||++. .++|+|+++||+.+++++..++.+|+||++|+++++|||+|+..++|+++
T Consensus 156 ~~l~~P~~iavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~ 230 (349)
T 3v64_C 156 QSLEKPRAIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 230 (349)
T ss_dssp TTCSCEEEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCCCcceEEEecCcCeEEEeccCC-----CCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEE
Confidence 6788999999999999999999875 58999999999999998888899999999999999999999999999999
Q ss_pred ecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEecCCCCeeeEEEEeCCCC
Q psy5806 1208 DFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRSNQEDFLNIKAISASKQ 1285 (1332)
Q Consensus 1208 d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~q 1285 (1332)
+++|+.+++++. +.+|+||++ ++++||||||.+++|.+++|.+| +..+++..++..|++|+++++.+|
T Consensus 231 ~~dG~~~~~~~~~~~~~P~giav-------~~~~ly~td~~~~~V~~~~~~~G---~~~~~i~~~~~~p~gi~v~~~~~q 300 (349)
T 3v64_C 231 NLDGSHRKAVISQGLPHPFAITV-------FEDSLYWTDWHTKSINSANKFTG---KNQEIIRNKLHFPMDIHTLHPQRQ 300 (349)
T ss_dssp ETTSCSCEEEECSSCSSEEEEEE-------ETTEEEEEETTTTEEEEEETTTC---CSCEEEECSCSCCCCEEEECGGGS
T ss_pred eCCCCceEEEEeCCCCCceEEEE-------ECCEEEEecCCCCeEEEEEccCC---CccEEeccCCCCCceEEEEccccC
Confidence 999999888876 889999999 99999999999999999999999 778888889999999999999988
Q ss_pred -CCCCCCCCCCCCCCccceeccCCCCceeeCCCCCC--CCcccccccc
Q psy5806 1286 -LTWNPCAQDNGGCSHLCFYKGRTKGYVCGCPDDLE--PNEECFEGIQ 1330 (1332)
Q Consensus 1286 -~~~n~C~~~ng~C~~lC~~~~~~~~~~C~C~~~~~--~~~~c~~~~~ 1330 (1332)
.+.|||+.+||||+||||+. +.+++|+||+|+. ++-+|.+.++
T Consensus 301 p~~~n~C~~~~g~C~~lCl~~--~~~~~C~C~~g~~~~d~~~C~~~~~ 346 (349)
T 3v64_C 301 PAGKNRCGDNNGGCTHLCLPS--GQNYTCACPTGFRKINSHACALEVL 346 (349)
T ss_dssp CCCCCTTTTGGGGCSSEEECC--TTSCEEECCTTEEEETTTEEEEGGG
T ss_pred ccccCcccCCCCCcccEeecC--CCCCeeECCCCCcCCCCCcccchhc
Confidence 68999999999999999998 4689999999994 3348988764
No 10
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-53 Score=503.63 Aligned_cols=333 Identities=35% Similarity=0.698 Sum_probs=296.0
Q ss_pred CCCcCCCCCCccccccCCCCCceeeCCCCccccCCCCcccc-CCccceEeeccceeEEEecCCCCCcceeeeccccccee
Q psy5806 664 HPCNENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSE-NPSKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMVA 742 (1332)
Q Consensus 664 ~pC~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~-~~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~~ 742 (1332)
+.|+ +||+|||+|+..++ +|+|.|+.||.|.+|+++|.. .++++|+|+.+..|++++++... ....++++.++.
T Consensus 2 ~ec~-~~~~C~~~C~n~~g-~~~C~C~~g~~l~~d~~~C~~~~~~~~ll~~~~~~I~~i~~~g~~---~~~~~~~~~~~~ 76 (349)
T 3v64_C 2 NECA-EEGYCSQGCTNSEG-AFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSE---YTLLLNNLENAI 76 (349)
T ss_dssp --------CCSSEECCC----CCEECCTTEEECTTSSCEEESSSCCEEEEECBSCEEEECTTSCC---EEEEECSCSCEE
T ss_pred cccC-CCCCCcCeeecCCC-CeEEECCCCccCCCCCCcccccccCceeEeecccceEEEeCCCCe---eEEeecCCCceE
Confidence 5788 78999999999987 999999999999999999974 36889999999999999998643 234456788899
Q ss_pred EEeecCCCceEEEEecCCCceEEEecCCCCceEEEeCCCCCccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEec
Q psy5806 743 SVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVVNDLNRTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFWL 822 (1332)
Q Consensus 743 ~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~ 822 (1332)
+++||+.+++|||+|...+.|+|+.++|+..++++..++..|.|||+||.+++|||+|...++|++++++|+.+++++..
T Consensus 77 ~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~ 156 (349)
T 3v64_C 77 ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ 156 (349)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECT
T ss_pred EEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeC
Confidence 99999999999999999999999999999988888888999999999999999999999999999999999999998888
Q ss_pred CCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEecc-cccCceeEEeCCCCCeEEEEeCCCCeEEEEc
Q psy5806 823 NLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFETE-VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKT 901 (1332)
Q Consensus 823 ~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~~-l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~ 901 (1332)
.+..|++|||||..|+|||+|++.. ++|+|+.|||+.+++++.. +.+|+||++|+.+ ++|||+|...++|++++
T Consensus 157 ~l~~P~~iavdp~~g~ly~td~~~~----~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~-~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 157 SLEKPRAIALHPMEGTIYWTDWGNT----PRIEASSMDGSGRRIIADTHLFWPNGLTIDYAG-RRMYWVDAKHHVIERAN 231 (349)
T ss_dssp TCSCEEEEEEETTTTEEEEEECSSS----CEEEEEETTSCSCEESCCSSCSCEEEEEEETTT-TEEEEEETTTTEEEEEE
T ss_pred CCCCcceEEEecCcCeEEEeccCCC----CEEEEEeCCCCCcEEEEECCCCCcceEEEeCCC-CEEEEEECCCCEEEEEe
Confidence 8899999999999999999999875 6999999999999998876 9999999999988 89999999999999999
Q ss_pred cCCCceeEEec-cCCcceEEEEeCCEEEEEeCCCCEEEEEECCCC---eEEEeeee--cCcceEEecc-ccCCCCCcccC
Q psy5806 902 LATGRAKRAYA-VQSHPYTLTVLDYYVYWTDVQHSKIYRANKYDV---KDIVEFAQ--VDRPWLVRAA-QNISFPNACGS 974 (1332)
Q Consensus 902 ~dG~~~~~l~~-~~~~P~~la~~~~~iywtD~~~~~i~~~~~~~g---~~i~~~~~--~~i~~~~~~~-~~~~~~n~C~~ 974 (1332)
++|..++++.. .+.+|+||++++++|||+||.+++|.+++|.+| +++...+. ++|. ++++. ||.+ .|||+.
T Consensus 232 ~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~-v~~~~~qp~~-~n~C~~ 309 (349)
T 3v64_C 232 LDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIH-TLHPQRQPAG-KNRCGD 309 (349)
T ss_dssp TTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEE-EECGGGSCCC-CCTTTT
T ss_pred CCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEE-EEccccCccc-cCcccC
Confidence 99999887765 789999999999999999999999999999888 56665554 8898 88865 5666 999999
Q ss_pred CCCCCccccccCCCCccccCCCCeeEccCCccccc
Q psy5806 975 NNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFS 1009 (1332)
Q Consensus 975 ~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~ 1009 (1332)
+||||+|||++.|.+++|+||+||. ..|+++|.+
T Consensus 310 ~~g~C~~lCl~~~~~~~C~C~~g~~-~~d~~~C~~ 343 (349)
T 3v64_C 310 NNGGCTHLCLPSGQNYTCACPTGFR-KINSHACAL 343 (349)
T ss_dssp GGGGCSSEEECCTTSCEEECCTTEE-EETTTEEEE
T ss_pred CCCCcccEeecCCCCCeeECCCCCc-CCCCCcccc
Confidence 9999999999999999999999999 889999984
No 11
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=8.5e-52 Score=494.84 Aligned_cols=336 Identities=31% Similarity=0.660 Sum_probs=293.3
Q ss_pred CCcccCCCCCCccccccCCCCccccCCCCeeEccCCcccccc-CcceEEEEeecceEEEEeCCCCCCCCcccccCCccce
Q psy5806 969 PNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSR-TREFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSS 1047 (1332)
Q Consensus 969 ~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~-p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~ 1047 (1332)
.++|. .++.|+|.|.+++++|+|.|+.||.|..|+++|+.. +++||+|+.++. |++++++.... ...++.+..|
T Consensus 44 ~~eC~-~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~C~~~~~~~~l~~~~~~~-I~~i~~~~~~~---~~~~~~~~~~ 118 (386)
T 3v65_B 44 VNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRID-IRQVLPHRSEY---TLLLNNLENA 118 (386)
T ss_dssp ---------CCTTEEC-----CCEECCTTEEECTTSSCEEECSSCCEEEEECBSC-EEEECTTSCCC---EEEECSCSCE
T ss_pred cceeC-CcCcccCcCCCCCCCCeEEECCCceEcCCCCeECCccccceeEeecCcc-ceeeccCCCcE---EEEecCCCcc
Confidence 68897 568999999999999999999999999999999875 688999999999 99999875433 3345677889
Q ss_pred EEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEE-E
Q psy5806 1048 IFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKI-L 1126 (1332)
Q Consensus 1048 ~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~-~ 1126 (1332)
.+|+||+.+++|||+|...++|++++++ |+..+.++..++..|.||||||.+++|||+|...++|.+++++|+.+++ +
T Consensus 119 ~gl~~d~~~~~ly~~D~~~~~I~r~~~~-g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~ 197 (386)
T 3v65_B 119 IALDFHHRRELVFWSDVTLDRILRANLN-GSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 197 (386)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETT-SCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEE
T ss_pred EEEEEecCCCeEEEEeCCCCcEEEEecC-CCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEee
Confidence 9999999999999999999999999987 6667777777888999999999999999999999999999999988777 5
Q ss_pred ecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEE
Q psy5806 1127 VNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEY 1206 (1332)
Q Consensus 1127 ~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~ 1206 (1332)
..++..|++|||||..|+|||||++. .++|+|++++|+.+++++..++.+|+||+||+++++|||+|+.+++|++
T Consensus 198 ~~~l~~P~giavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~ 272 (386)
T 3v65_B 198 WQSLEKPRAIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 272 (386)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred cCCCCCCcEEEEEcCCCeEEEeccCC-----CCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEE
Confidence 56788999999999999999999875 5899999999999999998889999999999999999999999999999
Q ss_pred EecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEecCCCCeeeEEEEeCCC
Q psy5806 1207 CDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRSNQEDFLNIKAISASK 1284 (1332)
Q Consensus 1207 ~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 1284 (1332)
++++|..+++++. +.+|+||++ ++++||||||.+++|.+++|.+| ...+++..++..|++|+++++.+
T Consensus 273 ~d~dG~~~~~~~~~~~~~P~giav-------~~~~ly~td~~~~~V~~~~~~~G---~~~~~i~~~~~~p~gi~v~~~~~ 342 (386)
T 3v65_B 273 ANLDGSHRKAVISQGLPHPFAITV-------FEDSLYWTDWHTKSINSANKFTG---KNQEIIRNKLHFPMDIHTLHPQR 342 (386)
T ss_dssp ECTTSCSCEEEECSSCSSEEEEEE-------ETTEEEEEETTTTEEEEEETTTC---CSCEEEECSCSCCCCEEEESGGG
T ss_pred EeCCCCeeEEEEECCCCCceEEEE-------ECCEEEEeeCCCCeEEEEECCCC---cceEEEccCCCCCceEEEEchhc
Confidence 9999999888876 889999999 99999999999999999999999 77888888999999999999998
Q ss_pred C-CCCCCCCCCCCCCCccceeccCCCCceeeCCCCCC--CCccccc
Q psy5806 1285 Q-LTWNPCAQDNGGCSHLCFYKGRTKGYVCGCPDDLE--PNEECFE 1327 (1332)
Q Consensus 1285 q-~~~n~C~~~ng~C~~lC~~~~~~~~~~C~C~~~~~--~~~~c~~ 1327 (1332)
| .+.|||..+||||+||||+. +.+++|+||+|++ ++-+|.|
T Consensus 343 q~~~~n~C~~~ng~C~~lCl~~--~~~~~C~C~~g~~~~d~~~C~~ 386 (386)
T 3v65_B 343 QPAGKNRCGDNNGGCTHLCLPS--GQNYTCACPTGFRKINSHACAQ 386 (386)
T ss_dssp SCCCCCTTTTSCTTSSSEEECC--SSSCEEECCTTCBCSSSSCCBC
T ss_pred CcCCcCccccCCCCCCceeeeC--CCCCeeECCCCCcCCCCCccCC
Confidence 8 68999999999999999998 4689999999995 2236764
No 12
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=1.9e-51 Score=493.73 Aligned_cols=338 Identities=27% Similarity=0.561 Sum_probs=300.5
Q ss_pred CCcccCCCCCCccccccCCCCccccCCCCeeEccCCcccccc-CcceEEEEeecceEEEEeCCCCCCCCcccccCCccce
Q psy5806 969 PNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSR-TREFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSS 1047 (1332)
Q Consensus 969 ~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~-p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~ 1047 (1332)
.++|. .++.|+|.|.+++++|.|.|+.||.+..++++|... +.+||+|+.++. |++++++..... ..++.+.++
T Consensus 40 ideC~-~~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~~C~~~~~~~~ll~~~~~~-I~~i~l~~~~~~---~~~~~~~~~ 114 (400)
T 3p5b_L 40 IDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHE-VRKMTLDRSEYT---SLIPNLRNV 114 (400)
T ss_dssp CCCCS-TTSSCSSCCBCCSSSCBCCCCTTCCCCTTTSSCCCSTTSCEEEEEETTE-EEEECTTSCSCE---EEECSCSCE
T ss_pred chhhh-ccCCCCCccCCCccceeeeccccccccccccceeeccccceeEEeccce-eEEEccCCccee---EeccccCcc
Confidence 68887 357899999999999999999999999999999875 788999999999 999999865432 335678899
Q ss_pred EEEEEeCCCcEEEEEeCCCCeEEEEECCCC----CCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceE
Q psy5806 1048 IFFDYHYSKNLIYFADMRSGNLRTFDMSDS----TRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHK 1123 (1332)
Q Consensus 1048 ~~id~d~~~~~lY~sd~~~~~I~~~~l~~g----~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~ 1123 (1332)
.+||||+.+++|||+|...++|++++++ + +..++++..++..|.||||||++++|||+|...++|++++++|..+
T Consensus 115 ~~l~~d~~~~~lywsD~~~~~I~~~~~~-g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~ 193 (400)
T 3p5b_L 115 VALDTEVASNRIYWSDLSQRMICSTQLD-RAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR 193 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEC-------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE
T ss_pred eEEeeeeccCceEEEecCCCeEEEEEcc-cCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce
Confidence 9999999999999999999999999987 4 3456666668889999999999999999999999999999999988
Q ss_pred EE-EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCC
Q psy5806 1124 KI-LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNK 1202 (1332)
Q Consensus 1124 ~~-~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~ 1202 (1332)
++ +..++..|++|||||..|+||||||+. .++|+|+++||+.+++++..++.+|+|||||+.+++|||+|+..+
T Consensus 194 ~~l~~~~~~~P~~iavdp~~g~ly~td~~~-----~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~ 268 (400)
T 3p5b_L 194 KTLFRENGSKPRAIVVDPVHGFMYWTDWGT-----PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 268 (400)
T ss_dssp EEEEECSSCCEEEEEEETTTTEEEEEECSS-----SCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred EEEEeCCCCCcceEEEecccCeEEEEeCCC-----CCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCC
Confidence 77 556888999999999999999999985 479999999999999999888999999999999999999999999
Q ss_pred eEEEEecCCCceEEEEe----ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEecCCCCeeeEE
Q psy5806 1203 RIEYCDFFGRSRKIVIS----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRSNQEDFLNIK 1278 (1332)
Q Consensus 1203 ~I~~~d~dG~~~~~~~~----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~~~~~~~~i~ 1278 (1332)
+|+++|++|..+++++. +.+|+||++ ++++||||||.+++|.+++|.+| +.++++..++..|++|+
T Consensus 269 ~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v-------~~~~lywtd~~~~~V~~~~~~~G---~~~~~i~~~~~~p~~i~ 338 (400)
T 3p5b_L 269 SISSIDVNGGNRKTILEDEKRLAHPFSLAV-------FEDKVFWTDIINEAIFSANRLTG---SDVNLLAENLLSPEDMV 338 (400)
T ss_dssp EEEEEETTSCCCEEEEECSSTTSSEEEEEE-------ETTEEEEEESSSCSEEEEESSSC---CCCEEEECSCSCEEEEE
T ss_pred EEEEEeCCCCccEEEEeCCCCCCCCEEEEE-------eCCEEEEecCCCCeEEEEEcCCC---CceEEEecCCCCCceEE
Confidence 99999999999888876 689999999 99999999999999999999999 78888889999999999
Q ss_pred EEeCCCC-CCCCCCC---CCCCCCCccceeccC----CCCceeeCCCCC---CCCccccc
Q psy5806 1279 AISASKQ-LTWNPCA---QDNGGCSHLCFYKGR----TKGYVCGCPDDL---EPNEECFE 1327 (1332)
Q Consensus 1279 ~~~~~~q-~~~n~C~---~~ng~C~~lC~~~~~----~~~~~C~C~~~~---~~~~~c~~ 1327 (1332)
++++.+| .+.|||+ .+||+|+|||++.+. ..+++|+||+|| .++.+|..
T Consensus 339 v~~~~~qp~~~n~c~~~~~~ng~C~~lC~~~~~~~~~~~~~~C~C~~g~~l~~d~~~C~~ 398 (400)
T 3p5b_L 339 LFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLT 398 (400)
T ss_dssp EESGGGSCCCCCSSSSSSSGGGGCSSEEEECCCSSTTCCSEEEECCTTCEECTTSSSEES
T ss_pred EEeeccCCCCCCccccccCCCcCcCCeecCCCcccCCCCCeeEECCCCCEECCCCCccCC
Confidence 9999988 5889996 579999999998731 116899999999 34447864
No 13
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=1.6e-50 Score=485.55 Aligned_cols=335 Identities=32% Similarity=0.645 Sum_probs=299.5
Q ss_pred cCCCcCCCCCCccccccCCCCCceeeCCCCccccCCCCccccC-CccceEeeccceeEEEecCCCCCcceeeecccccce
Q psy5806 663 THPCNENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSEN-PSKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMV 741 (1332)
Q Consensus 663 ~~pC~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~~-~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~ 741 (1332)
.+.|.. .+.|++.|...++ +|+|.|+.||.+..++++|... +.+||+++.+..|++++++..... ..++.+.++
T Consensus 40 ideC~~-~~~C~~~C~n~~g-~~~C~C~~g~~~~~~~~~C~~~~~~~~ll~~~~~~I~~i~l~~~~~~---~~~~~~~~~ 114 (400)
T 3p5b_L 40 IDECQD-PDTCSQLCVNLEG-GYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYT---SLIPNLRNV 114 (400)
T ss_dssp CCCCST-TSSCSSCCBCCSS-SCBCCCCTTCCCCTTTSSCCCSTTSCEEEEEETTEEEEECTTSCSCE---EEECSCSCE
T ss_pred chhhhc-cCCCCCccCCCcc-ceeeeccccccccccccceeeccccceeEEeccceeEEEccCCccee---EeccccCcc
Confidence 467873 4689999999887 9999999999999999999753 678999999999999999875432 224578899
Q ss_pred eEEeecCCCceEEEEecCCCceEEEecCC----CCceEEEeCCCCCccceeEecCCCeEEEEeCCCCeEEEEeCCCCceE
Q psy5806 742 ASVDVDTKNEYIYWSDISEKTIERVRFDM----TGRERLVVNDLNRTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAK 817 (1332)
Q Consensus 742 ~~id~d~~~~~lYwsD~~~~~I~r~~~~g----~~~~~vi~~~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~ 817 (1332)
.+||||+.+++|||+|...+.|+++.++| +..++++..++..|.||||||++++|||+|...++|++++++|+.++
T Consensus 115 ~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~ 194 (400)
T 3p5b_L 115 VALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK 194 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEE
T ss_pred eEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceE
Confidence 99999999999999999999999999998 45677888789999999999999999999999999999999999999
Q ss_pred EEEecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEecc-cccCceeEEeCCCCCeEEEEeCCCCe
Q psy5806 818 VLFWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFETE-VIWPSCLAIDYSDNPKLYWVDTSKHT 896 (1332)
Q Consensus 818 ~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~~-l~~P~gl~iD~~~~~~lYw~d~~~~~ 896 (1332)
+++...+..|++|||||..|+|||+||+.. ++|+|+.|||+.+++++.. +.+|+||++|+.+ ++|||+|+..++
T Consensus 195 ~l~~~~~~~P~~iavdp~~g~ly~td~~~~----~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~-~~lY~aD~~~~~ 269 (400)
T 3p5b_L 195 TLFRENGSKPRAIVVDPVHGFMYWTDWGTP----AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLS-GRLYWVDSKLHS 269 (400)
T ss_dssp EEEECSSCCEEEEEEETTTTEEEEEECSSS----CCEEEEETTSCSCEEEECSSCSCEEEEEEETTT-TEEEEEETTTTE
T ss_pred EEEeCCCCCcceEEEecccCeEEEEeCCCC----CEEEEEeCCCCccEEEEECCCCceEEEEEEeCC-CEEEEEECCCCE
Confidence 999888999999999999999999999876 7999999999999999877 9999999999998 999999999999
Q ss_pred EEEEccCCCceeEEec---cCCcceEEEEeCCEEEEEeCCCCEEEEEECCCC---eEEEeee--ecCcceEEecc-ccCC
Q psy5806 897 IEYKTLATGRAKRAYA---VQSHPYTLTVLDYYVYWTDVQHSKIYRANKYDV---KDIVEFA--QVDRPWLVRAA-QNIS 967 (1332)
Q Consensus 897 I~~~~~dG~~~~~l~~---~~~~P~~la~~~~~iywtD~~~~~i~~~~~~~g---~~i~~~~--~~~i~~~~~~~-~~~~ 967 (1332)
|++++++|..++++.. .+.||+||++++++|||+||.+++|++++|.+| ++|..++ |++|+ ++++. ||..
T Consensus 270 I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~-v~~~~~qp~~ 348 (400)
T 3p5b_L 270 ISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMV-LFHNLTQPRG 348 (400)
T ss_dssp EEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEE-EESGGGSCCC
T ss_pred EEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEE-EEeeccCCCC
Confidence 9999999999988875 489999999999999999999999999999988 5666555 38898 88865 6656
Q ss_pred CCCccc---CCCCCCccccccCCC------CccccCCCCeeEccCCccccc
Q psy5806 968 FPNACG---SNNGGCSHLCLRNPT------NFTCACPTGILLSADRRSCFS 1009 (1332)
Q Consensus 968 ~~n~C~---~~nGgCshlCl~~p~------~~~C~Cp~g~~l~~d~~tC~~ 1009 (1332)
.|||+ .+||||+|||++.|. +++|+||.||.|..|+++|++
T Consensus 349 -~n~c~~~~~~ng~C~~lC~~~~~~~~~~~~~~C~C~~g~~l~~d~~~C~~ 398 (400)
T 3p5b_L 349 -VNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLT 398 (400)
T ss_dssp -CCSSSSSSSGGGGCSSEEEECCCSSTTCCSEEEECCTTCEECTTSSSEES
T ss_pred -CCccccccCCCcCcCCeecCCCcccCCCCCeeEECCCCCEECCCCCccCC
Confidence 89996 479999999999875 589999999999999999984
No 14
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=2.4e-50 Score=482.35 Aligned_cols=334 Identities=35% Similarity=0.697 Sum_probs=293.1
Q ss_pred cCCCcCCCCCCccccccCCCCCceeeCCCCccccCCCCcccc-CCccceEeeccceeEEEecCCCCCcceeeecccccce
Q psy5806 663 THPCNENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSE-NPSKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMV 741 (1332)
Q Consensus 663 ~~pC~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~-~~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~ 741 (1332)
.++|. .++.|+|.|+..++ +|+|.|+.||.|.+|+++|.. .++.+|+++.+..|++++++.... ...++.+..+
T Consensus 44 ~~eC~-~~~~C~~~C~~~~g-~~~C~C~~g~~l~~d~~~C~~~~~~~~l~~~~~~~I~~i~~~~~~~---~~~~~~~~~~ 118 (386)
T 3v65_B 44 VNECA-EEGYCSQGCTNSEG-AFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEY---TLLLNNLENA 118 (386)
T ss_dssp ---------CCTTEEC------CCEECCTTEEECTTSSCEEECSSCCEEEEECBSCEEEECTTSCCC---EEEECSCSCE
T ss_pred cceeC-CcCcccCcCCCCCC-CCeEEECCCceEcCCCCeECCccccceeEeecCccceeeccCCCcE---EEEecCCCcc
Confidence 46787 46789999999887 999999999999999999985 357899999999999999986432 2334578899
Q ss_pred eEEeecCCCceEEEEecCCCceEEEecCCCCceEEEeCCCCCccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEe
Q psy5806 742 ASVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVVNDLNRTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFW 821 (1332)
Q Consensus 742 ~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~ 821 (1332)
.+++||+.+++|||+|...+.|+|+.++|+..++++..++..|.|||+||.+++|||+|...++|++++++|+.+++++.
T Consensus 119 ~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~ 198 (386)
T 3v65_B 119 IALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW 198 (386)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC
T ss_pred EEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec
Confidence 99999999999999999999999999999988888888899999999999999999999999999999999999999988
Q ss_pred cCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEecc-cccCceeEEeCCCCCeEEEEeCCCCeEEEE
Q psy5806 822 LNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFETE-VIWPSCLAIDYSDNPKLYWVDTSKHTIEYK 900 (1332)
Q Consensus 822 ~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~~-l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~ 900 (1332)
.++..|++|||||..|+|||+|++.. ++|+|+.|||+.+++++.. +.+|+||++|+.+ ++|||+|...++|+++
T Consensus 199 ~~l~~P~giavdp~~g~ly~td~~~~----~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~-~~lY~aD~~~~~I~~~ 273 (386)
T 3v65_B 199 QSLEKPRAIALHPMEGTIYWTDWGNT----PRIEASSMDGSGRRIIADTHLFWPNGLTIDYAG-RRMYWVDAKHHVIERA 273 (386)
T ss_dssp SSCSCEEEEEEETTTTEEEEEECSSS----CEEEEEETTSCSCEEEECSSCSCEEEEEEEGGG-TEEEEEETTTTEEEEE
T ss_pred CCCCCCcEEEEEcCCCeEEEeccCCC----CEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCC-CEEEEEECCCCEEEEE
Confidence 88899999999999999999999875 6999999999999998876 9999999999888 8999999999999999
Q ss_pred ccCCCceeEEec-cCCcceEEEEeCCEEEEEeCCCCEEEEEECCCC---eEEEeeee--cCcceEEecc-ccCCCCCccc
Q psy5806 901 TLATGRAKRAYA-VQSHPYTLTVLDYYVYWTDVQHSKIYRANKYDV---KDIVEFAQ--VDRPWLVRAA-QNISFPNACG 973 (1332)
Q Consensus 901 ~~dG~~~~~l~~-~~~~P~~la~~~~~iywtD~~~~~i~~~~~~~g---~~i~~~~~--~~i~~~~~~~-~~~~~~n~C~ 973 (1332)
+++|..++++.. .+.+|+||+++++.|||+||.+++|.+++|.+| ++|...+. ++|. ++++. ||.+ .|||+
T Consensus 274 d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~-v~~~~~q~~~-~n~C~ 351 (386)
T 3v65_B 274 NLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIH-TLHPQRQPAG-KNRCG 351 (386)
T ss_dssp CTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEE-EESGGGSCCC-CCTTT
T ss_pred eCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEE-EEchhcCcCC-cCccc
Confidence 999999887765 789999999999999999999999999999888 56665544 8888 88765 5566 99999
Q ss_pred CCCCCCccccccCCCCccccCCCCeeEccCCccccc
Q psy5806 974 SNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFS 1009 (1332)
Q Consensus 974 ~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~ 1009 (1332)
.+||||+||||+.|.+++|+||+||. ..|+++|++
T Consensus 352 ~~ng~C~~lCl~~~~~~~C~C~~g~~-~~d~~~C~~ 386 (386)
T 3v65_B 352 DNNGGCTHLCLPSGQNYTCACPTGFR-KINSHACAQ 386 (386)
T ss_dssp TSCTTSSSEEECCSSSCEEECCTTCB-CSSSSCCBC
T ss_pred cCCCCCCceeeeCCCCCeeECCCCCc-CCCCCccCC
Confidence 99999999999999999999999999 889999973
No 15
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=5.1e-47 Score=440.24 Aligned_cols=300 Identities=29% Similarity=0.620 Sum_probs=266.3
Q ss_pred CcceEEEEeecceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCC-ceeEeecCCC
Q psy5806 1011 TREFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTR-IKPIPLMNDT 1089 (1332)
Q Consensus 1011 p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~-~~~i~~~~~~ 1089 (1332)
|++||||++++. |++|+++... ....++++++.++.+||||+.+++|||+|...++|++++++ |+. .+.++..++.
T Consensus 3 ~~p~ll~~~~~~-I~~i~l~~~~-~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~-g~~~~~~~~~~~l~ 79 (318)
T 3sov_A 3 SAPLLLYANRRD-LRLVDATNGK-ENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFN-KTESVQNVVVSGLL 79 (318)
T ss_dssp -CCEEEEECEEE-EEEEETTCTT-SCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETT-SSSCCCEEEEECCS
T ss_pred CccEEEEEccCe-EEEEECCCCc-eEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEcc-CCCceEEEEcCCCC
Confidence 689999999999 9999998654 23456677888999999999999999999999999999988 443 3556667888
Q ss_pred CceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEEE-ecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCC
Q psy5806 1090 IRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKIL-VNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDG 1168 (1332)
Q Consensus 1090 ~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~~-~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG 1168 (1332)
.|.|||+||.+++|||+|...++|.+++++|..++++ ..++..|++|||||..|+|||||++. .++|+|+++||
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~-----~~~I~r~~~dG 154 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGE-----VPKIERAGMDG 154 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSS-----SCEEEEEETTS
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCC-----CCEEEEEEcCC
Confidence 9999999999999999999999999999999987774 46888999999999999999999975 48999999999
Q ss_pred CceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECC
Q psy5806 1169 SYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWE 1246 (1332)
Q Consensus 1169 ~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~ 1246 (1332)
+.+++++..++.+|+||++|+++++|||+|+.+++|+++++||+++++++. +.+|+||++ +++.|||+||.
T Consensus 155 ~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav-------~~~~lywtd~~ 227 (318)
T 3sov_A 155 SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTL-------FEDILYWTDWS 227 (318)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEE-------ETTEEEEEETT
T ss_pred CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEE-------eCCEEEEEecC
Confidence 999999988899999999999999999999999999999999999988887 899999999 89999999999
Q ss_pred CCEEEEEEecCCCCcceEEEEecCCCCeeeEEEEeCCCC-CCCCCCCCCCCCCCccceeccCCCCceeeCCCCCC---CC
Q psy5806 1247 AMSVVIAREKSDTGQWDVHLIRSNQEDFLNIKAISASKQ-LTWNPCAQDNGGCSHLCFYKGRTKGYVCGCPDDLE---PN 1322 (1332)
Q Consensus 1247 ~~~V~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~q-~~~n~C~~~ng~C~~lC~~~~~~~~~~C~C~~~~~---~~ 1322 (1332)
+++|.+++|.+| +..+++..++..|++|++++..+| ...|||+.+||+|+|||++.+...+++|+||+||+ ++
T Consensus 228 ~~~V~~~~~~~G---~~~~~i~~~~~~P~~i~v~~~~~q~~~~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~ 304 (318)
T 3sov_A 228 THSILACNKYTG---EGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENG 304 (318)
T ss_dssp TTEEEEEETTTC---CSCEEEECCCSSCCCEEEECGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTS
T ss_pred CCeEEEEECCCC---CceEEEeCCCCCCcEEEEeccccccccccccccCCCCcceEEecCCCCCCeEEECCCCCEECCCC
Confidence 999999999988 677888888999999999999988 47899999999999999988322268999999993 33
Q ss_pred cccccc
Q psy5806 1323 EECFEG 1328 (1332)
Q Consensus 1323 ~~c~~~ 1328 (1332)
-+|.++
T Consensus 305 ~~c~~~ 310 (318)
T 3sov_A 305 KTCKDG 310 (318)
T ss_dssp SCBCC-
T ss_pred CCCCCC
Confidence 478654
No 16
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=1.6e-46 Score=436.05 Aligned_cols=297 Identities=35% Similarity=0.670 Sum_probs=268.1
Q ss_pred CCccceEeeccceeEEEecCCCCCcceeeecccccceeEEeecCCCceEEEEecCCCceEEEecCCCCc-eEEEeCCCCC
Q psy5806 705 NPSKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMVASVDVDTKNEYIYWSDISEKTIERVRFDMTGR-ERLVVNDLNR 783 (1332)
Q Consensus 705 ~~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~-~~vi~~~~~~ 783 (1332)
++++||+|+.+..|++++++... ....++++++.+++++|||+.+++|||+|...+.|+|+.++|+.. +.++..++..
T Consensus 2 g~~p~ll~~~~~~I~~i~l~~~~-~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~ 80 (318)
T 3sov_A 2 GSAPLLLYANRRDLRLVDATNGK-ENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLS 80 (318)
T ss_dssp --CCEEEEECEEEEEEEETTCTT-SCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSC
T ss_pred CCccEEEEEccCeEEEEECCCCc-eEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCC
Confidence 36789999999999999998753 234566678889999999999999999999999999999998864 5677778899
Q ss_pred ccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCC
Q psy5806 784 TESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTN 863 (1332)
Q Consensus 784 p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~ 863 (1332)
|.|||+||.+++|||+|...++|++++++|+.+++++...+..|++|||||..|+|||+||+.. ++|+|+.|||+.
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~----~~I~r~~~dG~~ 156 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEV----PKIERAGMDGSS 156 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSS----CEEEEEETTSCS
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCC----CEEEEEEcCCCC
Confidence 9999999999999999999999999999999999988788899999999999999999999866 799999999999
Q ss_pred cEEEecc-cccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEec-cCCcceEEEEeCCEEEEEeCCCCEEEEEE
Q psy5806 864 RAVFETE-VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYA-VQSHPYTLTVLDYYVYWTDVQHSKIYRAN 941 (1332)
Q Consensus 864 ~~~l~~~-l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~-~~~~P~~la~~~~~iywtD~~~~~i~~~~ 941 (1332)
+++++.. +.+|+||++|+.+ ++|||+|...++|++++++|..++++.. .+.+|+||+++++.|||+||.+++|.+++
T Consensus 157 ~~~~~~~~l~~Pnglavd~~~-~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~ 235 (318)
T 3sov_A 157 RFIIINSEIYWPNGLTLDYEE-QKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACN 235 (318)
T ss_dssp CEEEECSSCSCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred eEEEEECCCCCccEEEEeccC-CEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEE
Confidence 9988876 9999999999988 8999999999999999999999988876 78999999999999999999999999999
Q ss_pred CCCC---eEEEeeee--cCcceEEecc-ccCCCCCcccCCCCCCccccccCCC--CccccCCCCeeEccCCccccc
Q psy5806 942 KYDV---KDIVEFAQ--VDRPWLVRAA-QNISFPNACGSNNGGCSHLCLRNPT--NFTCACPTGILLSADRRSCFS 1009 (1332)
Q Consensus 942 ~~~g---~~i~~~~~--~~i~~~~~~~-~~~~~~n~C~~~nGgCshlCl~~p~--~~~C~Cp~g~~l~~d~~tC~~ 1009 (1332)
+.+| ++|...+. ++|+ ++++. ||.. .|||+.+||||||||++.|. +|+|+||.||.|..|+++|..
T Consensus 236 ~~~G~~~~~i~~~~~~P~~i~-v~~~~~q~~~-~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~ 309 (318)
T 3sov_A 236 KYTGEGLREIHSDIFSPMDIH-AFSQQRQPNA-TNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKD 309 (318)
T ss_dssp TTTCCSCEEEECCCSSCCCEE-EECGGGSCCC-CCTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCBCC
T ss_pred CCCCCceEEEeCCCCCCcEEE-Eecccccccc-ccccccCCCCcceEEecCCCCCCeEEECCCCCEECCCCCCCCC
Confidence 9888 56665543 8998 88865 5555 89999999999999999987 589999999999999999985
No 17
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=4.6e-44 Score=416.42 Aligned_cols=296 Identities=27% Similarity=0.538 Sum_probs=258.1
Q ss_pred cceEEEEeecceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCC---CCCceeEeecCC
Q psy5806 1012 REFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSD---STRIKPIPLMND 1088 (1332)
Q Consensus 1012 ~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~---g~~~~~i~~~~~ 1088 (1332)
++||||+++++ |++|+++..... ..++.+.+|.+++||+.+++|||+|...++|++++++. ++..+.++..++
T Consensus 1 ~~~ll~~~~~~-I~~i~~~~~~~~---~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 76 (316)
T 1ijq_A 1 IAYLFFTNRHE-VRKMTLDRSEYT---SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 76 (316)
T ss_dssp CCEEEEECBSS-EEEEETTSCCCE---EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred CCEEEEECCCe-EEEEECCCcceE---ehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCC
Confidence 47999999999 999999865433 22457788999999999999999999999999999873 144555665677
Q ss_pred CCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEE-EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecC
Q psy5806 1089 TIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKI-LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLD 1167 (1332)
Q Consensus 1089 ~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~-~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ld 1167 (1332)
..|.|||+||.+++|||+|...++|.+++++|+.+++ +...+..|++|||||..|+|||++++. .++|+|+++|
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~-----~~~I~~~~~d 151 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-----PAKIKKGGLN 151 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS-----SCEEEEEETT
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCC-----CCeEEEEcCC
Confidence 8999999999999999999999999999999988776 445788999999999999999999874 4799999999
Q ss_pred CCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe----ecccceEEEecCCccccccEEEEE
Q psy5806 1168 GSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS----KVAPYGLSVRQSPGKAFIVELYWT 1243 (1332)
Q Consensus 1168 G~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~----~~~P~glav~~~~~~~~~~~lYwt 1243 (1332)
|+.+++++...+.+|+||++|+++++|||+|+..++|++++++|+++++++. ..+|+||++ ++++|||+
T Consensus 152 G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav-------~~~~ly~~ 224 (316)
T 1ijq_A 152 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-------FEDKVFWT 224 (316)
T ss_dssp SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE-------ETTEEEEE
T ss_pred CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEE-------ECCEEEEE
Confidence 9999988887899999999999999999999999999999999999888875 579999999 88999999
Q ss_pred ECCCCEEEEEEecCCCCcceEEEEecCCCCeeeEEEEeCCCC-CCCCCCCCC---CCCCCccceeccC----CCCceeeC
Q psy5806 1244 DWEAMSVVIAREKSDTGQWDVHLIRSNQEDFLNIKAISASKQ-LTWNPCAQD---NGGCSHLCFYKGR----TKGYVCGC 1315 (1332)
Q Consensus 1244 d~~~~~V~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~q-~~~n~C~~~---ng~C~~lC~~~~~----~~~~~C~C 1315 (1332)
||.+++|.++++.+| +..+++..++..|++|+++++.+| .+.|||+.+ ||+|+|||++.+. ..+++|+|
T Consensus 225 d~~~~~V~~~~~~~g---~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C 301 (316)
T 1ijq_A 225 DIINEAIFSANRLTG---SDVNLLAENLLSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCAC 301 (316)
T ss_dssp ETTTTEEEEEETTTC---CCCEEEECSCSCCCCEEEESGGGSCCCCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEEC
T ss_pred ECCCCeEEEEeCCCC---cceEEEecCCCCceEEEEeccccCCcccccccccccCCCCcCcccCCCccccCCCCCeEeeC
Confidence 999999999999998 777888888899999999999888 488999998 9999999998721 14689999
Q ss_pred CCCCC---CCcccc
Q psy5806 1316 PDDLE---PNEECF 1326 (1332)
Q Consensus 1316 ~~~~~---~~~~c~ 1326 (1332)
|+||+ ++.+|.
T Consensus 302 ~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 302 PDGMLLARDMRSCL 315 (316)
T ss_dssp CTTCEECTTSSCEE
T ss_pred CCCCEECCCCCccC
Confidence 99993 344785
No 18
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=3.9e-44 Score=417.02 Aligned_cols=292 Identities=33% Similarity=0.647 Sum_probs=258.9
Q ss_pred ccceEeeccceeEEEecCCCCCcceeeecccccceeEEeecCCCceEEEEecCCCceEEEecCC----CCceEEEeCCCC
Q psy5806 707 SKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMVASVDVDTKNEYIYWSDISEKTIERVRFDM----TGRERLVVNDLN 782 (1332)
Q Consensus 707 ~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g----~~~~~vi~~~~~ 782 (1332)
++||+|+++.+|++++++...... + ++.+.++.+++||+.+++|||+|...+.|++++++| +..+.++..++.
T Consensus 1 ~~~ll~~~~~~I~~i~~~~~~~~~-~--~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 77 (316)
T 1ijq_A 1 IAYLFFTNRHEVRKMTLDRSEYTS-L--IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 77 (316)
T ss_dssp CCEEEEECBSSEEEEETTSCCCEE-E--ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCS
T ss_pred CCEEEEECCCeEEEEECCCcceEe-h--hcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCC
Confidence 468999999999999998754322 2 357889999999999999999999999999999987 556677777788
Q ss_pred CccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCC
Q psy5806 783 RTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGT 862 (1332)
Q Consensus 783 ~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~ 862 (1332)
.|.|||+||.+++|||+|...++|++.+++|+.+++++...+..|++||+||..|+|||++++.. ++|+|+.|||+
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~----~~I~~~~~dG~ 153 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTP----AKIKKGGLNGV 153 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSS----CEEEEEETTSC
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCC----CeEEEEcCCCC
Confidence 99999999999999999999999999999999998888778899999999999999999999865 69999999999
Q ss_pred CcEEEecc-cccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEec---cCCcceEEEEeCCEEEEEeCCCCEEE
Q psy5806 863 NRAVFETE-VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYA---VQSHPYTLTVLDYYVYWTDVQHSKIY 938 (1332)
Q Consensus 863 ~~~~l~~~-l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~---~~~~P~~la~~~~~iywtD~~~~~i~ 938 (1332)
.+++++.. +.+|+||++|+.+ ++|||+|...++|++++++|..++++.. .+.+|+||++++++|||+||.+++|.
T Consensus 154 ~~~~~~~~~~~~P~gla~d~~~-~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~ 232 (316)
T 1ijq_A 154 DIYSLVTENIQWPNGITLDLLS-GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIF 232 (316)
T ss_dssp CEEEEECSSCSCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEE
T ss_pred CeEEEEECCCCCceEEEEeccC-CEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEE
Confidence 99988876 9999999999988 8999999999999999999999988865 47899999999999999999999999
Q ss_pred EEECCCC---eEEEeeee--cCcceEEecc-ccCCCCCcccCC---CCCCccccccCC------CCccccCCCCeeEccC
Q psy5806 939 RANKYDV---KDIVEFAQ--VDRPWLVRAA-QNISFPNACGSN---NGGCSHLCLRNP------TNFTCACPTGILLSAD 1003 (1332)
Q Consensus 939 ~~~~~~g---~~i~~~~~--~~i~~~~~~~-~~~~~~n~C~~~---nGgCshlCl~~p------~~~~C~Cp~g~~l~~d 1003 (1332)
++++.+| +++..+++ ++|+ ++++. ||.. .|+|+.+ ||||+|||+++| ++|+|+||.||.|..|
T Consensus 233 ~~~~~~g~~~~~i~~~~~~p~~i~-v~~~~~qp~~-~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~d 310 (316)
T 1ijq_A 233 SANRLTGSDVNLLAENLLSPEDMV-LFHNLTQPRG-VNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARD 310 (316)
T ss_dssp EEETTTCCCCEEEECSCSCCCCEE-EESGGGSCCC-CCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTT
T ss_pred EEeCCCCcceEEEecCCCCceEEE-EeccccCCcc-cccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECCC
Confidence 9999888 56665543 8898 88765 5656 8999998 999999999987 3699999999999999
Q ss_pred Ccccc
Q psy5806 1004 RRSCF 1008 (1332)
Q Consensus 1004 ~~tC~ 1008 (1332)
+++|.
T Consensus 311 ~~~C~ 315 (316)
T 1ijq_A 311 MRSCL 315 (316)
T ss_dssp SSCEE
T ss_pred CCccC
Confidence 99997
No 19
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.96 E-value=2.3e-27 Score=268.55 Aligned_cols=254 Identities=22% Similarity=0.427 Sum_probs=212.9
Q ss_pred cceEEEEeecceEEEEeCCCCCCCC----cccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecC
Q psy5806 1012 REFLLYTSRFGVIRRISLDTADLLP----VTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMN 1087 (1332)
Q Consensus 1012 ~~~ll~~~~~~~i~~i~l~~~~~~~----~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~ 1087 (1332)
.+||+|+..+. |++++++...... ..++. ...+|.++++|+.+++|||+|...++|++++++ +.....++..+
T Consensus 1 ~~~l~~~~~~~-I~~~~~~g~~~~~~~~~~~~~~-~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~-g~~~~~~~~~~ 77 (267)
T 1npe_A 1 GTHLLFAQTGK-IERLPLERNTMKKTEAKAFLHI-PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLH-GGEPTTIIRQD 77 (267)
T ss_dssp CEEEEEEEEEE-EEEEEESSSCBCGGGCEEEEEE-EEEEEEEEEEETTTTEEEEEETTTTEEEEEESS-SCCCEEEECTT
T ss_pred CcEEEEEcCCe-EEEEEecCcccccccceeeecC-CCCcEEEEEEecCCCEEEEEECCCCEEEEEecC-CCCcEEEEECC
Confidence 36899999988 9999998654321 11111 235688999999999999999999999999987 55555565556
Q ss_pred CCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEE-EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEec
Q psy5806 1088 DTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKI-LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYL 1166 (1332)
Q Consensus 1088 ~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~-~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~l 1166 (1332)
+..|.+||+||.+++|||+|...++|.+++++|+.+++ +..++..|++|++||.+|+|||++++. ..++|+++++
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~----~~~~I~~~~~ 153 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR----DNPKIETSHM 153 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS----SSCEEEEEET
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC----CCcEEEEEec
Confidence 67999999999999999999999999999999987665 444668999999999999999999863 1368999999
Q ss_pred CCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEEC
Q psy5806 1167 DGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDW 1245 (1332)
Q Consensus 1167 dG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~ 1245 (1332)
||+..+++....+..|+||++|+++++|||+|...++|.+++++|..++.++. +.+|+||++ ++++|||+++
T Consensus 154 dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~-------d~~~lyva~~ 226 (267)
T 1npe_A 154 DGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTS-------YGKNLYYTDW 226 (267)
T ss_dssp TSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEE-------ETTEEEEEET
T ss_pred CCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEE-------eCCEEEEEEC
Confidence 99988888766788999999999999999999999999999999988777777 889999999 7999999999
Q ss_pred CCCEEEEEEecCCCCcceEEEEecC-CCCeeeEEEEeC
Q psy5806 1246 EAMSVVIAREKSDTGQWDVHLIRSN-QEDFLNIKAISA 1282 (1332)
Q Consensus 1246 ~~~~V~~~~~~~g~~~~~~~~~~~~-~~~~~~i~~~~~ 1282 (1332)
.+++|+++++.+| +....+..+ .+.|.+|.+...
T Consensus 227 ~~~~v~~~d~~~g---~~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 227 KTNSVIAMDLAIS---KEMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp TTTEEEEEETTTT---EEEEEECCSSCCCCCCEEEECS
T ss_pred CCCeEEEEeCCCC---CceEEEccccccccceeeecCc
Confidence 9999999999988 666666544 356888876544
No 20
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.95 E-value=1.6e-25 Score=253.47 Aligned_cols=237 Identities=31% Similarity=0.536 Sum_probs=207.1
Q ss_pred cceEeeccceeEEEecCCCCCcc----eeeecccccceeEEeecCCCceEEEEecCCCceEEEecCCCCceEEEeCCCCC
Q psy5806 708 KFLLVSQTDKIRQISLDVEYRYP----IVLPLRQLKMVASVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVVNDLNR 783 (1332)
Q Consensus 708 ~~ll~s~~~~i~~i~l~~~~~~~----~~~~~~~~~~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~~~~ 783 (1332)
++|+|+++..|++++++...... ..+.. +..++.++++|+.+++|||+|...+.|.+++++|...+.++..++..
T Consensus 2 ~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~-~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQTGKIERLPLERNTMKKTEAKAFLHI-PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEEEEEEEEEESSSCBCGGGCEEEEEE-EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcCCeEEEEEecCcccccccceeeecC-CCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 68999999999999998754321 12222 24678999999999999999999999999999998877777777889
Q ss_pred ccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCC
Q psy5806 784 TESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTN 863 (1332)
Q Consensus 784 p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~ 863 (1332)
|.+||+|+.+++|||+|...++|.+.+++|+.+++++..++..|++|++||..|+|||++++.. +++|+++.+||+.
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~---~~~I~~~~~dg~~ 157 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRD---NPKIETSHMDGTN 157 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSS---SCEEEEEETTSCC
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCC---CcEEEEEecCCCC
Confidence 9999999999999999999999999999999888777667789999999998899999998731 2689999999999
Q ss_pred cEEEecc-cccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEeccCCcceEEEEeCCEEEEEeCCCCEEEEEEC
Q psy5806 864 RAVFETE-VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYAVQSHPYTLTVLDYYVYWTDVQHSKIYRANK 942 (1332)
Q Consensus 864 ~~~l~~~-l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~~~~~P~~la~~~~~iywtD~~~~~i~~~~~ 942 (1332)
++++... +..|+||++|..+ ++|||+|...++|.+++++|..++.+...+.+|++|++++++|||+++.+++|+++++
T Consensus 158 ~~~~~~~~~~~P~gia~d~~~-~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 158 RRILAQDNLGLPNGLTFDAFS-SQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp CEEEECTTCSCEEEEEEETTT-TEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred cEEEEECCCCCCcEEEEcCCC-CEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEeCCEEEEEECCCCeEEEEeC
Confidence 8888755 8899999999988 8999999999999999999988777777788999999999999999999999999999
Q ss_pred CCCeEEE
Q psy5806 943 YDVKDIV 949 (1332)
Q Consensus 943 ~~g~~i~ 949 (1332)
.+|+++.
T Consensus 237 ~~g~~~~ 243 (267)
T 1npe_A 237 AISKEMD 243 (267)
T ss_dssp TTTEEEE
T ss_pred CCCCceE
Confidence 9885443
No 21
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.89 E-value=4.8e-21 Score=219.35 Aligned_cols=265 Identities=14% Similarity=0.214 Sum_probs=201.9
Q ss_pred CCCeEEEEecCCCCceEEEcCCCCceEEEEeCCCCCceeeEEeccCCeEEEEeCCCCeEEEEecCCCceEEEEeecceEE
Q psy5806 563 IGGIMYWCSWGDLHKIEMAGMDGSHRHILASDSLKNPTGLAIDLENSRLYWANVGLKTIEFTNLDGTRKQTLIALHHLKV 642 (1332)
Q Consensus 563 ~~G~lywtd~g~~~~I~r~~~dG~~~~~l~~~~l~~p~glaiD~~~~rLYw~d~~~~~I~~~~~dG~~~~~~~~~~~l~v 642 (1332)
..++||++......+|.+...||++.+.|... .+..|.+ .++.||+++...+ .
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~---~~~~i~~--~g~~Iyy~~~~~~---------~------------- 76 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND---TAMYINA--DKNYVYYVRNNNQ---------K------------- 76 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE---EEEEEEE--CSSEEEEEEECC------------------------
T ss_pred eCCEEEEEeCCCCceEEEEcCCCCCCEEccCC---ceeeEEE--cCCEEEEEECCCC---------c-------------
Confidence 46899999865568999999999998877753 3556654 4788888754311 0
Q ss_pred EeeecCceeEEEEeCCCCcCcCCCcCCCCCCccccccCCCCCceeeCCCCccccCCCCccccCCccceEeeccceeEEEe
Q psy5806 643 MTKVVGLTDIDIFHRRRSKKTHPCNENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSENPSKFLLVSQTDKIRQIS 722 (1332)
Q Consensus 643 ~~~~~~~~~i~v~~~~~q~~~~pC~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~ll~s~~~~i~~i~ 722 (1332)
. + +..|+ -+.+..|+++.
T Consensus 77 ---------------------------------------~---------------~-------~~~~~-~~n~~~Iy~i~ 94 (302)
T 3s25_A 77 ---------------------------------------I---------------T-------SQTFF-SYDRNSLCRIK 94 (302)
T ss_dssp -----------------------------------------------------------------CCS-SCCSEEEEEEE
T ss_pred ---------------------------------------c---------------c-------cccee-ccCCCeEEEEe
Confidence 0 0 00111 13456788888
Q ss_pred cCCCCCcceeeecccccceeEEeecCCCceEEEEe---cCCCceEEEecCCCCceEEEeCCCCCccceeEecCCCeEEEE
Q psy5806 723 LDVEYRYPIVLPLRQLKMVASVDVDTKNEYIYWSD---ISEKTIERVRFDMTGRERLVVNDLNRTESIAVDAIGRKIYWT 799 (1332)
Q Consensus 723 l~~~~~~~~~~~~~~~~~~~~id~d~~~~~lYwsD---~~~~~I~r~~~~g~~~~~vi~~~~~~p~glAvD~~~~nLYwt 799 (1332)
+++.... .+. .. .+.++.+.+++|||++ .....|++++++|+..+.|..... +++||.+++|||+
T Consensus 95 ~dg~~~~-~l~--~~----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~-----~~~~~~g~~iy~t 162 (302)
T 3s25_A 95 RNGHGST-VLD--PD----PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL-----FTCNTSDRYFYYN 162 (302)
T ss_dssp TTSCCCE-EEE--CS----CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC-----CCSEEETTEEEEE
T ss_pred CCCCcce-Eee--cC----CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc-----eEeeEECCEEEEE
Confidence 8875421 111 11 1223444678999999 678899999999999888776533 6789999999999
Q ss_pred eCCCCeEEEEeCCCCceEEEEecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEecc-cccCceeE
Q psy5806 800 DMNAQTIMVSDIDGKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFETE-VIWPSCLA 878 (1332)
Q Consensus 800 D~~~~~I~v~~ldG~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~~-l~~P~gl~ 878 (1332)
+.+..+|.+++++|..++.+.. .+..++++|..|+|||++|+.. ++|+|+.|||+++++|.+. +. .
T Consensus 163 ~~g~~~Iy~~~l~g~~~~~l~~----~~~~~~~~P~g~~iy~t~~~~~----~~I~~~~ldG~~~~~Lt~~~~~-----~ 229 (302)
T 3s25_A 163 NPKNGQLYRYDTASQSEALFYD----CNCYKPVVLDDTNVYYMDVNRD----NAIVHVNINNPNPVVLTEANIE-----H 229 (302)
T ss_dssp CTTTCCEEEEETTTTEEEEEEC----SCEEEEEEEETTEEEEEEGGGT----TEEEEECSSSCCCEECSCSCEE-----E
T ss_pred eCCCceEEEEECCCCCEEEEeC----CCccceeeecCCEEEEEEcCCC----cEEEEEECCCCCeEEEeCCCcc-----e
Confidence 9989999999999999887743 3556778899999999999866 7999999999999999876 52 3
Q ss_pred EeCCCCCeEEEE-eCCCCeEEEEccCCCceeEEeccCCcceEEEEeCCEEEEEeCCCCEEEEEECCCC
Q psy5806 879 IDYSDNPKLYWV-DTSKHTIEYKTLATGRAKRAYAVQSHPYTLTVLDYYVYWTDVQHSKIYRANKYDV 945 (1332)
Q Consensus 879 iD~~~~~~lYw~-d~~~~~I~~~~~dG~~~~~l~~~~~~P~~la~~~~~iywtD~~~~~i~~~~~~~g 945 (1332)
+|+.+ ++|||+ ++....|+++++||..++.|... ...+|++++++|||+||..++|+++. .+|
T Consensus 230 ~~~~g-~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~--~~~~i~i~~d~Iy~td~~~~~i~~~~-~dG 293 (302)
T 3s25_A 230 YNVYG-SLIFYQRGGDNPALCVVKNDGTGFKELAKG--EFCNINVTSQYVYFTDFVSNKEYCTS-TQN 293 (302)
T ss_dssp EEEET-TEEEEEECSSSCEEEEEETTSCCCEEEEES--CEEEEEECSSEEEEEETTTCCEEEEE-SSS
T ss_pred EEECC-CEEEEEECCCCcEEEEEECCCCccEEeeCC--ccceEEEeCCEEEEEECCCCeEEEEE-CCC
Confidence 67778 999997 66679999999999999888653 35689999999999999999999986 444
No 22
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.87 E-value=8.4e-21 Score=217.33 Aligned_cols=265 Identities=14% Similarity=0.161 Sum_probs=200.9
Q ss_pred CCCCeEEEEeC-CCCeEEEEccCCCceeEEeccCCcceEEEEeCCEEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEE
Q psy5806 882 SDNPKLYWVDT-SKHTIEYKTLATGRAKRAYAVQSHPYTLTVLDYYVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLV 960 (1332)
Q Consensus 882 ~~~~~lYw~d~-~~~~I~~~~~dG~~~~~l~~~~~~P~~la~~~~~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~ 960 (1332)
++ +.||+... ..+.|++++.+|+..+.|... .+..|.+.+++||.++...+.-
T Consensus 24 ~g-~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~--~~~~i~~~g~~Iyy~~~~~~~~----------------------- 77 (302)
T 3s25_A 24 SD-GEVFFSNTNDNGRLYAMNIDGSNIHKLSND--TAMYINADKNYVYYVRNNNQKI----------------------- 77 (302)
T ss_dssp ET-TEEEEEEGGGTTEEEEEETTSCSCEEEEEE--EEEEEEECSSEEEEEEECC--------------------------
T ss_pred eC-CEEEEEeCCCCceEEEEcCCCCCCEEccCC--ceeeEEEcCCEEEEEECCCCcc-----------------------
Confidence 45 79999974 357999999999998887552 2566788899998885432210
Q ss_pred eccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEEeecceEEEEeCCCCCCCCcccc
Q psy5806 961 RAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLP 1040 (1332)
Q Consensus 961 ~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~p 1040 (1332)
.+ ..|+ .+.+.. |+++.++...... +
T Consensus 78 ---~~----------------------------------------------~~~~-~~n~~~-Iy~i~~dg~~~~~-l-- 103 (302)
T 3s25_A 78 ---TS----------------------------------------------QTFF-SYDRNS-LCRIKRNGHGSTV-L-- 103 (302)
T ss_dssp ----------------------------------------------------CCS-SCCSEE-EEEEETTSCCCEE-E--
T ss_pred ---cc----------------------------------------------ccee-ccCCCe-EEEEeCCCCcceE-e--
Confidence 00 0000 012334 7888887654321 1
Q ss_pred cCCccceEEEEEeCCCcEEEEEe---CCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEe
Q psy5806 1041 FPEYMSSIFFDYHYSKNLIYFAD---MRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVAR 1117 (1332)
Q Consensus 1041 i~~~~~~~~id~d~~~~~lY~sd---~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ 1117 (1332)
.+-.+.++.+.+++|||++ .....|++++++ |+..+.+..... +++||.+++|||++.....|.+++
T Consensus 104 ----~~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d-Gs~~~~lt~~~~-----~~~~~~g~~iy~t~~g~~~Iy~~~ 173 (302)
T 3s25_A 104 ----DPDPCIYASLIGNYIYYLHYDTQTATSLYRIRID-GEEKKKIKNHYL-----FTCNTSDRYFYYNNPKNGQLYRYD 173 (302)
T ss_dssp ----ECSCEEEEEEETTEEEEEEESSSSCEEEEEEETT-SCCCEEEESSCC-----CCSEEETTEEEEECTTTCCEEEEE
T ss_pred ----ecCCccEEEEeCCEEEEEeecCCCCceEEEEECC-CCCeEEEeCCCc-----eEeeEECCEEEEEeCCCceEEEEE
Confidence 1122346677889999999 567789999988 888877764332 678999999999998888999999
Q ss_pred eCCceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEE
Q psy5806 1118 SDGQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWA 1197 (1332)
Q Consensus 1118 ldG~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~ 1197 (1332)
++|..++++.. .+..++++|..++|||++|+. ..+|+|++|||+++++|+.+.+ | .+|+.+++|||+
T Consensus 174 l~g~~~~~l~~---~~~~~~~~P~g~~iy~t~~~~-----~~~I~~~~ldG~~~~~Lt~~~~--~---~~~~~g~~Iy~~ 240 (302)
T 3s25_A 174 TASQSEALFYD---CNCYKPVVLDDTNVYYMDVNR-----DNAIVHVNINNPNPVVLTEANI--E---HYNVYGSLIFYQ 240 (302)
T ss_dssp TTTTEEEEEEC---SCEEEEEEEETTEEEEEEGGG-----TTEEEEECSSSCCCEECSCSCE--E---EEEEETTEEEEE
T ss_pred CCCCCEEEEeC---CCccceeeecCCEEEEEEcCC-----CcEEEEEECCCCCeEEEeCCCc--c---eEEECCCEEEEE
Confidence 99998887644 355667889999999999986 4789999999999998876544 2 478889999997
Q ss_pred -EcCCCeEEEEecCCCceEEEEeecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1198 -DSTNKRIEYCDFFGRSRKIVISKVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1198 -d~~~~~I~~~d~dG~~~~~~~~~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
+...+.|+++++||++|+.|... ...+|++ ++++|||+||..++|++++ .+|
T Consensus 241 ~~~~~~~i~~~~~DG~~r~~l~~~-~~~~i~i-------~~d~Iy~td~~~~~i~~~~-~dG 293 (302)
T 3s25_A 241 RGGDNPALCVVKNDGTGFKELAKG-EFCNINV-------TSQYVYFTDFVSNKEYCTS-TQN 293 (302)
T ss_dssp ECSSSCEEEEEETTSCCCEEEEES-CEEEEEE-------CSSEEEEEETTTCCEEEEE-SSS
T ss_pred ECCCCcEEEEEECCCCccEEeeCC-ccceEEE-------eCCEEEEEECCCCeEEEEE-CCC
Confidence 66678999999999999888763 3458999 9999999999999999996 456
No 23
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.83 E-value=3.8e-21 Score=172.56 Aligned_cols=77 Identities=36% Similarity=0.847 Sum_probs=71.6
Q ss_pred cCCCCCceecCCCCceEeCCcCcCCCCCCCCCCCC-CCCCCCCCCCCCCC-CCEEecCCCEEEeeeecCCCCCCCCCCCc
Q psy5806 13 LQEIPQYKKCNRTGACIPAQWQCDNEFDCEMGEDE-MKCPQASPPKKCSP-DEHRCTTGHCILKTWLCDGIPDCSLGEDE 90 (1332)
Q Consensus 13 ~~c~~~~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE-~~C~~~~~~~~C~~-~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE 90 (1332)
.+|.+.||+|. +|+|||..|+|||..||.||||| .+| ....|.+ .+|+|.+|+||+..|+|||..||.|||||
T Consensus 3 ~~C~~~~f~C~-~g~Ci~~~~~CDg~~DC~DgsDE~~~C----~~~~C~~~~~f~C~~g~CI~~~~~CDG~~DC~DgSDE 77 (82)
T 2fyj_A 3 RTCPPNQFSCA-SGRCIPISWTCDLDDDCGDRSDESASC----AYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDE 77 (82)
T ss_dssp SSSCTTEEETT-SSCEEETTSSSSCSSSSCSTTTTTSSC----CCSSSCSSSEEECTTSCEEETTCBSSSSBCCSSSSSC
T ss_pred CCCCCCceEeC-CCCEEeccccCCCcccCCCcccccccc----ccccCCCCCceECCCCCeEcHHHccCCCCcCCCCccc
Confidence 47999999998 79999999999999999999999 799 4567964 89999999999999999999999999999
Q ss_pred cccc
Q psy5806 91 RNCN 94 (1332)
Q Consensus 91 ~~C~ 94 (1332)
.+|.
T Consensus 78 ~~C~ 81 (82)
T 2fyj_A 78 AGCS 81 (82)
T ss_dssp SCCC
T ss_pred cCCC
Confidence 9985
No 24
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.82 E-value=2.8e-21 Score=171.85 Aligned_cols=76 Identities=38% Similarity=0.919 Sum_probs=70.4
Q ss_pred CCCCCceecCCCCceEeCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEecCCCEEEeeeecCCCCCCCCCCCc--c
Q psy5806 14 QEIPQYKKCNRTGACIPAQWQCDNEFDCEMGEDEMKCPQASPPKKCSPDEHRCTTGHCILKTWLCDGIPDCSLGEDE--R 91 (1332)
Q Consensus 14 ~c~~~~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE~~C~~~~~~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE--~ 91 (1332)
+|.+.||+|. +|+|||..|+|||..||.|||||.+| ....|.+.+|+|.+|+|||..|+|||..||.||||| .
T Consensus 2 ~C~~~~F~C~-~g~CI~~~~~CDg~~DC~DgSDE~~C----~~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~dgsDE~~~ 76 (80)
T 2fcw_B 2 TCSQAEFRCH-DGKCISRQFVCDSDRDCLDGSDEASC----PVLTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQ 76 (80)
T ss_dssp CCCTTEEECT-TSCEEEGGGTTSSSCCSTTCTTTTTH----HHHHCCTTEEECTTSCEEEGGGTTSSSCCSTTCGGGCGG
T ss_pred CCCCCccCCC-CCCEEeeecccCCcccCCCccccccc----ccccCCceeeECCCCCEEecccccCCCcCCCCCCCcCcc
Confidence 6999999998 89999999999999999999999999 345799999999999999999999999999999999 6
Q ss_pred ccc
Q psy5806 92 NCN 94 (1332)
Q Consensus 92 ~C~ 94 (1332)
+|.
T Consensus 77 ~C~ 79 (80)
T 2fcw_B 77 RCR 79 (80)
T ss_dssp GC-
T ss_pred cCC
Confidence 664
No 25
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=9.4e-17 Score=193.98 Aligned_cols=262 Identities=13% Similarity=0.118 Sum_probs=191.4
Q ss_pred eccceEEEEEEc-cCCeEEEEcCCCceEEEEEecCcceEEEEeCCCCCCccEEEeccCCeEEEEeCCCC----eEEEEeC
Q psy5806 465 NVKSVVAIAWES-ANDSLYWADVENGEINRAHINGTFQYNVIRHNTKKPAGVAIDWRTNKLYWTESEYN----WIEVSNL 539 (1332)
Q Consensus 465 ~~~~~~~i~~d~-~~~~lywsD~~~~~I~r~~~~g~~~~~v~~~~~~~p~glAvDw~~~~lYw~d~~~~----~I~v~~l 539 (1332)
.+.++.+|++|+ .++.||++|.. ++|+++.+++.....+.. ....|.+||+|+.++.||++|...+ .+.+...
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 356788999998 68999999977 999999998876665554 6788999999998888999997433 5666777
Q ss_pred CCCCc--EEEEeCCCCCceEEEEecCCCeEEEEecCCCCceEEEcCCCCceEEEEe-CCCCCceeeEEeccCCeEEEEeC
Q psy5806 540 DGTYP--TLLFWQNLSEPRDIAVNPIGGIMYWCSWGDLHKIEMAGMDGSHRHILAS-DSLKNPTGLAIDLENSRLYWANV 616 (1332)
Q Consensus 540 ~g~~~--~~l~~~~~~~P~~iavdp~~G~lywtd~g~~~~I~r~~~dG~~~~~l~~-~~l~~p~glaiD~~~~rLYw~d~ 616 (1332)
+|... ..+. .+..|.+||++|..|+|||+|++ ..+|.+..+++.....+.. ....+|+||++|+..++|||+|.
T Consensus 213 ~g~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~-~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 213 ESGFKVITELT--KGQNCNGAETHPINGELYFNSWN-AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp GGTSCSEEEEE--ECSSCCCEEECTTTCCEEEEETT-TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred CCceeeeeeec--cCCCceEEEEeCCCCEEEEEECC-CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 77665 3333 57899999999988999999987 4799999999877644443 34578999999999999999999
Q ss_pred CCCeEEEEecCCCceEEEEeecceEEEeeecCceeEEEEeCCCCcCcCCCcCCCCCCccccccCCCCCceeeCCCCcccc
Q psy5806 617 GLKTIEFTNLDGTRKQTLIALHHLKVMTKVVGLTDIDIFHRRRSKKTHPCNENNGGCSHLCLIAPKDGIRCVCPAGNLLR 696 (1332)
Q Consensus 617 ~~~~I~~~~~dG~~~~~~~~~~~l~v~~~~~~~~~i~v~~~~~q~~~~pC~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~ 696 (1332)
..+.|.++++||...+.. .+.++... ++ ..|+.
T Consensus 290 ~~~~I~~~~~d~~~~~~~----------------~~~~~ag~----------------------~g-------~~g~~-- 322 (430)
T 3tc9_A 290 NQHYILRSDYDWKTKRLT----------------TPYIVCGQ----------------------QG-------AKDWV-- 322 (430)
T ss_dssp TTTEEEEEEEETTTTEEC----------------CCEEEEEC----------------------TT-------CBCCB--
T ss_pred CCCEEEEEeCCccccccc----------------ceEEEecc----------------------CC-------CCCCC--
Confidence 999999999998532210 00000000 00 00110
Q ss_pred CCCCccccCCccceEeeccceeEEEecCCCCCcceeeeccccccee-EEeecC-------CCceEEEEecCCCceEEEec
Q psy5806 697 EDRRTCSENPSKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMVA-SVDVDT-------KNEYIYWSDISEKTIERVRF 768 (1332)
Q Consensus 697 ~d~~tC~~~~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~~-~id~d~-------~~~~lYwsD~~~~~I~r~~~ 768 (1332)
|+.. ....+..|. .+.++. .++.||++|...++|++++.
T Consensus 323 -dg~~--------------------------------~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~ 369 (430)
T 3tc9_A 323 -DGVG--------------------------------KKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP 369 (430)
T ss_dssp -CEEG--------------------------------GGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT
T ss_pred -CCCC--------------------------------cceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC
Confidence 1100 001233444 455532 35799999999999999998
Q ss_pred CCCCceEEEeC----------C-------CCCccceeEecCCCeEEEEeCCCCeEEEEeCC
Q psy5806 769 DMTGRERLVVN----------D-------LNRTESIAVDAIGRKIYWTDMNAQTIMVSDID 812 (1332)
Q Consensus 769 ~g~~~~~vi~~----------~-------~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ld 812 (1332)
+|. ..++... + +..|.|||+|..+++||++|..+++|.+.+++
T Consensus 370 ~G~-v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 370 QGR-VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp TSE-EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCc-EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 873 3444332 1 56899999998889999999999999998765
No 26
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=2.8e-16 Score=189.84 Aligned_cols=246 Identities=13% Similarity=0.144 Sum_probs=185.8
Q ss_pred CCCCCccEEEec-cCCeEEEEeCCCCeEEEEeCCCCCcEEEEeCCCCCceEEEEecCCCeEEEEecCC---CCceEEEcC
Q psy5806 508 NTKKPAGVAIDW-RTNKLYWTESEYNWIEVSNLDGTYPTLLFWQNLSEPRDIAVNPIGGIMYWCSWGD---LHKIEMAGM 583 (1332)
Q Consensus 508 ~~~~p~glAvDw-~~~~lYw~d~~~~~I~v~~l~g~~~~~l~~~~~~~P~~iavdp~~G~lywtd~g~---~~~I~r~~~ 583 (1332)
.+..|.+||+|. -.++||++|.. ++|.+.++++...+.+. ..+..|.+|++++...+|||+|++. ...+.....
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 477999999998 58999999988 89999999987666665 4788999999999877899999853 224555666
Q ss_pred CCCce--EEEEeCCCCCceeeEEeccCCeEEEEeCCCCeEEEEecCCCceEEEEeecceEEEeeecCceeEEEEeCCCCc
Q psy5806 584 DGSHR--HILASDSLKNPTGLAIDLENSRLYWANVGLKTIEFTNLDGTRKQTLIALHHLKVMTKVVGLTDIDIFHRRRSK 661 (1332)
Q Consensus 584 dG~~~--~~l~~~~l~~p~glaiD~~~~rLYw~d~~~~~I~~~~~dG~~~~~~~~~~~l~v~~~~~~~~~i~v~~~~~q~ 661 (1332)
+|... ..+. .+..|+|+++|+.+++|||+|...++|.+++.++.....+..
T Consensus 213 ~g~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~------------------------- 265 (430)
T 3tc9_A 213 ESGFKVITELT--KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFT------------------------- 265 (430)
T ss_dssp GGTSCSEEEEE--ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEE-------------------------
T ss_pred CCceeeeeeec--cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEE-------------------------
Confidence 67543 3333 478999999999899999999999999888777542211100
Q ss_pred CcCCCcCCCCCCccccccCCCCCceeeCCCCccccCCCCccccCCccceEeeccceeEEEecCCCCCcceeeecccccce
Q psy5806 662 KTHPCNENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSENPSKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMV 741 (1332)
Q Consensus 662 ~~~pC~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~ 741 (1332)
+.....|
T Consensus 266 -------------------------------------------------------------------------~~~~~~P 272 (430)
T 3tc9_A 266 -------------------------------------------------------------------------IQDSGWE 272 (430)
T ss_dssp -------------------------------------------------------------------------CSSSSCC
T ss_pred -------------------------------------------------------------------------cCCCCcc
Confidence 0011224
Q ss_pred eEEeecCCCceEEEEecCCCceEEEecCCCC-----ceEEEeC--------------CCCCcc-ceeEec-------CCC
Q psy5806 742 ASVDVDTKNEYIYWSDISEKTIERVRFDMTG-----RERLVVN--------------DLNRTE-SIAVDA-------IGR 794 (1332)
Q Consensus 742 ~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~-----~~~vi~~--------------~~~~p~-glAvD~-------~~~ 794 (1332)
..|++|+..++|||+|...++|+++..++.. ..++... .+..|. |++++. ..+
T Consensus 273 ~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g 352 (430)
T 3tc9_A 273 FHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY 352 (430)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE
T ss_pred eeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC
Confidence 5678888877899999999999998887642 2223221 256788 899963 356
Q ss_pred eEEEEeCCCCeEEEEeCCCCceEEEEe---------c-------CCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEe
Q psy5806 795 KIYWTDMNAQTIMVSDIDGKNAKVLFW---------L-------NLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAH 858 (1332)
Q Consensus 795 nLYwtD~~~~~I~v~~ldG~~~~~l~~---------~-------~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~ 858 (1332)
+||++|..+++|.+.+.+|....+.-. . .+..|++||++|..|.||++|.+++ +|.+..
T Consensus 353 ~lyvaD~~n~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~-----rIr~i~ 427 (430)
T 3tc9_A 353 DFYFCDRENHCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENR-----RIRKIG 427 (430)
T ss_dssp EEEEEEGGGTEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGT-----EEEEEE
T ss_pred eEEEEECCCcEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCC-----eEEEEc
Confidence 899999999999999999965554432 1 1568999999997899999998866 898887
Q ss_pred cC
Q psy5806 859 MD 860 (1332)
Q Consensus 859 ~d 860 (1332)
++
T Consensus 428 ~e 429 (430)
T 3tc9_A 428 YE 429 (430)
T ss_dssp EC
T ss_pred cC
Confidence 65
No 27
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.73 E-value=8.1e-16 Score=185.74 Aligned_cols=245 Identities=13% Similarity=0.119 Sum_probs=177.6
Q ss_pred CCCCCccEEEec--cCCeEEEEeCCCCeEEEEeCCCCCcEEEEeCCCCCceEEEEecCCCeEEEEecCC---CCceEEEc
Q psy5806 508 NTKKPAGVAIDW--RTNKLYWTESEYNWIEVSNLDGTYPTLLFWQNLSEPRDIAVNPIGGIMYWCSWGD---LHKIEMAG 582 (1332)
Q Consensus 508 ~~~~p~glAvDw--~~~~lYw~d~~~~~I~v~~l~g~~~~~l~~~~~~~P~~iavdp~~G~lywtd~g~---~~~I~r~~ 582 (1332)
.+..|.|||+|. -.++|||+|.. ++|.+.++.+...+.+. ..+..|.+||++|... ||++|++. ...+.+..
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEEC
T ss_pred ccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEE
Confidence 567899999998 47999999988 89999999554444444 4788999999999855 99999753 22344454
Q ss_pred CCCCce-EEEEeCCCCCceeeEEeccCCeEEEEeCCCCeEEEEecC-CCceEEEEeecceEEEeeecCceeEEEEeCCCC
Q psy5806 583 MDGSHR-HILASDSLKNPTGLAIDLENSRLYWANVGLKTIEFTNLD-GTRKQTLIALHHLKVMTKVVGLTDIDIFHRRRS 660 (1332)
Q Consensus 583 ~dG~~~-~~l~~~~l~~p~glaiD~~~~rLYw~d~~~~~I~~~~~d-G~~~~~~~~~~~l~v~~~~~~~~~i~v~~~~~q 660 (1332)
.++... ...+. .+..|+|+++|+.+++|||+|...+.|.+++.+ |.....+..
T Consensus 214 ~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~------------------------ 268 (433)
T 4hw6_A 214 RASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVM------------------------ 268 (433)
T ss_dssp GGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEE------------------------
T ss_pred CCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEec------------------------
Confidence 444332 12222 578999999999899999999998888888776 321111100
Q ss_pred cCcCCCcCCCCCCccccccCCCCCceeeCCCCccccCCCCccccCCccceEeeccceeEEEecCCCCCcceeeecccccc
Q psy5806 661 KKTHPCNENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSENPSKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKM 740 (1332)
Q Consensus 661 ~~~~pC~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~ 740 (1332)
. .. ...
T Consensus 269 --------------------------------------------------------------~-~~-----------~~~ 274 (433)
T 4hw6_A 269 --------------------------------------------------------------M-DT-----------KGS 274 (433)
T ss_dssp --------------------------------------------------------------C-SC-----------CSS
T ss_pred --------------------------------------------------------------c-CC-----------CCC
Confidence 0 00 001
Q ss_pred eeEEeecCCCceEEEEecCCCceEEEecCCCC-----ceEEEeC--------------CCCCccceeE---------ecC
Q psy5806 741 VASVDVDTKNEYIYWSDISEKTIERVRFDMTG-----RERLVVN--------------DLNRTESIAV---------DAI 792 (1332)
Q Consensus 741 ~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~-----~~~vi~~--------------~~~~p~glAv---------D~~ 792 (1332)
+..|++|+.+++||++|...++|+++..++.. ...+... .+..|.|||+ | .
T Consensus 275 ~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd-~ 353 (433)
T 4hw6_A 275 NFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE-D 353 (433)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS-C
T ss_pred cccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC-C
Confidence 12467788877899999999999998877431 1233321 2567999999 5 5
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCceEEEEec----------------CCCCCeEEEEeCCCCeEEEEecccCcCCCCceEE
Q psy5806 793 GRKIYWTDMNAQTIMVSDIDGKNAKVLFWL----------------NLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEM 856 (1332)
Q Consensus 793 ~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~----------------~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r 856 (1332)
.++||++|..+++|.+.+.+|....+.-.. .+..|.+||++|..|.||++|++++ +|.+
T Consensus 354 ~g~lyvaD~~n~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~-----rIr~ 428 (433)
T 4hw6_A 354 EYDFYFCDRDSHTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNH-----RVRK 428 (433)
T ss_dssp CEEEEEEETTTTEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGT-----EEEE
T ss_pred CCcEEEEECCCCEEEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCC-----EEEE
Confidence 678999999999999999999655443211 2567999999988899999999866 8888
Q ss_pred EecC
Q psy5806 857 AHMD 860 (1332)
Q Consensus 857 ~~~d 860 (1332)
..++
T Consensus 429 i~~e 432 (433)
T 4hw6_A 429 IAPE 432 (433)
T ss_dssp EEEC
T ss_pred EecC
Confidence 7664
No 28
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.73 E-value=9.7e-16 Score=184.11 Aligned_cols=247 Identities=16% Similarity=0.091 Sum_probs=186.1
Q ss_pred CCCCCccEEEeccCCeEEEEeCCCCeEEEEeCCCCCcEEEEeCCCCCceEEEEecCCCeEEEEecCCCCceEEEcCCCCc
Q psy5806 508 NTKKPAGVAIDWRTNKLYWTESEYNWIEVSNLDGTYPTLLFWQNLSEPRDIAVNPIGGIMYWCSWGDLHKIEMAGMDGSH 587 (1332)
Q Consensus 508 ~~~~p~glAvDw~~~~lYw~d~~~~~I~v~~l~g~~~~~l~~~~~~~P~~iavdp~~G~lywtd~g~~~~I~r~~~dG~~ 587 (1332)
.+..|.+||+|. .++|||+|...++|.+.++++...+.+.. ....|. ++++|..++|||+++....+|.+...++..
T Consensus 129 ~~~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~-~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 129 KFKYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHP-GFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCCCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEE-TCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred ccCCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeec-cCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 477999999995 67799999999999999998766665553 467788 999999999999998655589888887765
Q ss_pred eEEEE----eCCCCCceeeEEeccCCeEEEEeCCCCeEEEEecCCCceEEEEeecceEEEeeecCceeEEEEeCCCCcCc
Q psy5806 588 RHILA----SDSLKNPTGLAIDLENSRLYWANVGLKTIEFTNLDGTRKQTLIALHHLKVMTKVVGLTDIDIFHRRRSKKT 663 (1332)
Q Consensus 588 ~~~l~----~~~l~~p~glaiD~~~~rLYw~d~~~~~I~~~~~dG~~~~~~~~~~~l~v~~~~~~~~~i~v~~~~~q~~~ 663 (1332)
....+ ......|+++++|+.+++||++|. .+.|.++++++.....+...
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~-------------------------- 258 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQL-------------------------- 258 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEEC--------------------------
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEecc--------------------------
Confidence 43333 325688999999999999999876 57888888776543222100
Q ss_pred CCCcCCCCCCccccccCCCCCceeeCCCCccccCCCCccccCCccceEeeccceeEEEecCCCCCcceeeeccccccee-
Q psy5806 664 HPCNENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSENPSKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMVA- 742 (1332)
Q Consensus 664 ~pC~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~~- 742 (1332)
+ .... ...+|.
T Consensus 259 -----------------~-----------------------------------------~~g~----------~~~~P~~ 270 (409)
T 3hrp_A 259 -----------------E-----------------------------------------LSGS----------LGTNPGP 270 (409)
T ss_dssp -----------------C-----------------------------------------CCSC----------CCCSSCC
T ss_pred -----------------c-----------------------------------------ccCC----------CCCCccc
Confidence 0 0000 001123
Q ss_pred EEeecCCCceEEEEecCCCceEEEecCCCCceEEEeCC--------------CCCccceeEecCCCeEEEEeC-CCCeEE
Q psy5806 743 SVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVVND--------------LNRTESIAVDAIGRKIYWTDM-NAQTIM 807 (1332)
Q Consensus 743 ~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~--------------~~~p~glAvD~~~~nLYwtD~-~~~~I~ 807 (1332)
++++|+.++.||++|...++|++++.+|. ...+.... +..|.|||+|..++ ||++|. ..++|.
T Consensus 271 ~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~ 348 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLR 348 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEE
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEE
Confidence 67888888999999999999999999886 34444332 67799999998765 999999 999999
Q ss_pred EEe-CCCCceEEEEe-------------cCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecC
Q psy5806 808 VSD-IDGKNAKVLFW-------------LNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMD 860 (1332)
Q Consensus 808 v~~-ldG~~~~~l~~-------------~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~d 860 (1332)
+.+ .+|....+.-. ..+..|.+||+++. |.||++|++.+ +|.|..++
T Consensus 349 ~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~-----~Ir~i~~e 409 (409)
T 3hrp_A 349 KLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGK-----AIRKYAVE 409 (409)
T ss_dssp EEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTC-----EEEEEEEC
T ss_pred EEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCC-----eEEEEEeC
Confidence 999 56654433322 01568999999998 99999998866 89887653
No 29
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.71 E-value=8.5e-16 Score=185.57 Aligned_cols=262 Identities=13% Similarity=0.120 Sum_probs=184.6
Q ss_pred eccceEEEEEEc--cCCeEEEEcCCCceEEEEEecCcceEEEEeCCCCCCccEEEeccCCeEEEEeCCC----CeEEEEe
Q psy5806 465 NVKSVVAIAWES--ANDSLYWADVENGEINRAHINGTFQYNVIRHNTKKPAGVAIDWRTNKLYWTESEY----NWIEVSN 538 (1332)
Q Consensus 465 ~~~~~~~i~~d~--~~~~lywsD~~~~~I~r~~~~g~~~~~v~~~~~~~p~glAvDw~~~~lYw~d~~~----~~I~v~~ 538 (1332)
.+..+.+|++|+ .++.|||+|.. ++|+++.+.+....++. ..+..|.+||+|+.++ ||++|... ..+.+..
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEEC
T ss_pred ccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEE
Confidence 356788999998 48999999987 99999998655444443 4677899999999877 99999743 2344555
Q ss_pred CCCCCc-EEEEeCCCCCceEEEEecCCCeEEEEecCCCCceEEEcCC-CCceEEEE-eCCCCCceeeEEeccCCeEEEEe
Q psy5806 539 LDGTYP-TLLFWQNLSEPRDIAVNPIGGIMYWCSWGDLHKIEMAGMD-GSHRHILA-SDSLKNPTGLAIDLENSRLYWAN 615 (1332)
Q Consensus 539 l~g~~~-~~l~~~~~~~P~~iavdp~~G~lywtd~g~~~~I~r~~~d-G~~~~~l~-~~~l~~p~glaiD~~~~rLYw~d 615 (1332)
.++... ...+ ..+..|.+||+||..|.|||+|++ ..+|.+...+ |.....+. .....++.+|++|+.+++|||+|
T Consensus 214 ~~~~~~~~~~~-~~~~~P~giavd~~~G~lyv~d~~-~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 214 RASGFTERLSL-CNARGAKTCAVHPQNGKIYYTRYH-HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp GGGTTCCEEEE-EECSSBCCCEECTTTCCEEECBTT-CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred CCCCeeccccc-cccCCCCEEEEeCCCCeEEEEECC-CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe
Confidence 555443 1222 258899999999988999999986 4789999998 65423343 33456788999999999999999
Q ss_pred CCCCeEEEEecCCCceEEEEeecceEEEeeecCceeEEEEeCCCCcCcCCCcCCCCCCccccccCCCCCceeeCCCCccc
Q psy5806 616 VGLKTIEFTNLDGTRKQTLIALHHLKVMTKVVGLTDIDIFHRRRSKKTHPCNENNGGCSHLCLIAPKDGIRCVCPAGNLL 695 (1332)
Q Consensus 616 ~~~~~I~~~~~dG~~~~~~~~~~~l~v~~~~~~~~~i~v~~~~~q~~~~pC~~~nggCs~lCl~~~~~~~~C~Cp~g~~l 695 (1332)
...+.|.++++|+...+.. ...++.. .++ ..|+.
T Consensus 292 ~~~~~I~~~~~d~~~~~~~----------------~~~~~ag----------------------~~g-------~~g~~- 325 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLA----------------VPYIVCG----------------------QHS-------SPGWV- 325 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBC----------------CCEEEEE----------------------CTT-------CCCCB-
T ss_pred CCCCEEEEEeCCCCCcccC----------------cEEEEEe----------------------cCC-------CCccC-
Confidence 9999999999886421100 0000000 000 00110
Q ss_pred cCCCCccccCCccceEeeccceeEEEecCCCCCcceeeecccccceeEEee--------cCCCceEEEEecCCCceEEEe
Q psy5806 696 REDRRTCSENPSKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMVASVDV--------DTKNEYIYWSDISEKTIERVR 767 (1332)
Q Consensus 696 ~~d~~tC~~~~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~~~id~--------d~~~~~lYwsD~~~~~I~r~~ 767 (1332)
|+ ......+..|.++++ |..++.||++|...++|+++.
T Consensus 326 --dg--------------------------------~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 326 --DG--------------------------------MGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp --CE--------------------------------EGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred --CC--------------------------------cccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 11 000113455777777 245689999999999999998
Q ss_pred cCCCCceEEEeC-----------------CCCCccceeEecCCCeEEEEeCCCCeEEEEeCC
Q psy5806 768 FDMTGRERLVVN-----------------DLNRTESIAVDAIGRKIYWTDMNAQTIMVSDID 812 (1332)
Q Consensus 768 ~~g~~~~~vi~~-----------------~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ld 812 (1332)
.+| ...++... .+..|.|||+|...++||++|..+++|.+.+++
T Consensus 372 ~~G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 372 PEG-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTS-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCC-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 877 33334321 156799999998888999999999999998764
No 30
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.68 E-value=3.9e-14 Score=161.27 Aligned_cols=276 Identities=11% Similarity=0.103 Sum_probs=201.0
Q ss_pred cccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEec-cCCcceEEEEe-CCEEEEEeCCCCEEEEEECCCCeEE
Q psy5806 871 VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYA-VQSHPYTLTVL-DYYVYWTDVQHSKIYRANKYDVKDI 948 (1332)
Q Consensus 871 l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~-~~~~P~~la~~-~~~iywtD~~~~~i~~~~~~~g~~i 948 (1332)
...|.+|++|..+ +||+++...+.|..++.+|........ ....|.+|++. ++.||+++...+.|.+.+.. ++
T Consensus 19 ~~~p~~i~~d~~g--~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~-- 93 (300)
T 2qc5_A 19 DSGPYGITSSEDG--KVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG-- 93 (300)
T ss_dssp TCCEEEEEECTTS--CEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC--
T ss_pred CCCcceeeECCCC--CEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC--
Confidence 6689999999876 899999888999999988443322222 45788999987 46888888777777653321 10
Q ss_pred EeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEEeecceEEEEe
Q psy5806 949 VEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRIS 1028 (1332)
Q Consensus 949 ~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~ 1028 (1332)
+..+.
T Consensus 94 ---------------------------------------------------------------------------~~~~~ 98 (300)
T 2qc5_A 94 ---------------------------------------------------------------------------FTEYP 98 (300)
T ss_dssp ---------------------------------------------------------------------------EEEEE
T ss_pred ---------------------------------------------------------------------------eEEec
Confidence 00001
Q ss_pred CCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcC
Q psy5806 1029 LDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDS 1108 (1332)
Q Consensus 1029 l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~ 1108 (1332)
+. .....+.++++++. ++||+++...+.|++++.+ +.............|.+|++|.. ++||+++.
T Consensus 99 ~~-----------~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~ 164 (300)
T 2qc5_A 99 LP-----------QPDSGPYGITEGLN-GDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSD-NALWFTEN 164 (300)
T ss_dssp CS-----------STTCCEEEEEECST-TCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT-SSEEEEET
T ss_pred CC-----------CCCCCCccceECCC-CCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCC-CCEEEEec
Confidence 00 00123677888864 5699999878899999865 43332222224568999999964 55999998
Q ss_pred CCceEEEEeeCCceEEE-EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEE
Q psy5806 1109 QMHTINVARSDGQHKKI-LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAI 1187 (1332)
Q Consensus 1109 ~~~~I~v~~ldG~~~~~-~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glai 1187 (1332)
..+.|.+++.+|+.... +......|.+|++++ .|.||+++.+. +.|.+.+.+|.............|.+|++
T Consensus 165 ~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~~~~~~~~i~~ 237 (300)
T 2qc5_A 165 QNNSIGRITNTGKLEEYPLPTNAAAPVGITSGN-DGALWFVEIMG------NKIGRITTTGEISEYDIPTPNARPHAITA 237 (300)
T ss_dssp TTTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTT------TEEEEECTTCCEEEEECSSTTCCEEEEEE
T ss_pred CCCeEEEECCCCcEEEeeCCCCCCCcceEEECC-CCCEEEEccCC------CEEEEEcCCCcEEEEECCCCCCCceEEEE
Confidence 88899999988876654 334567899999999 78999999765 67999999776554434445678999999
Q ss_pred ecCCCEEEEEEcCCCeEEEEecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEec
Q psy5806 1188 DFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREK 1256 (1332)
Q Consensus 1188 D~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~ 1256 (1332)
|.+ ++||+++...+.|.+++.+|......+. ...|.+|++ +.++.||+++. + .|.++++.
T Consensus 238 d~~-g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~------~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 238 GKN-SEIWFTEWGANQIGRITNDNTIQEYQLQTENAEPHGITF------GKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp CST-TCEEEEETTTTEEEEECTTSCEEEEECCSTTCCCCCEEE------CTTSCEEEECS-S-EEEEEEEC
T ss_pred CCC-CCEEEeccCCCeEEEECCCCcEEEEECCccCCccceeEe------CCCCCEEEEcc-C-ceEEeCCC
Confidence 976 5699999888999999997754433333 578999999 44688999998 6 99998864
No 31
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=8.4e-15 Score=176.32 Aligned_cols=264 Identities=14% Similarity=0.130 Sum_probs=190.7
Q ss_pred CCCCCCccEEEec-cCCeEEEEeCCCCeEEEEeCCCCCcEEEEeC---CCCCceEEEE-------ecCCCeEEEEecCC-
Q psy5806 507 HNTKKPAGVAIDW-RTNKLYWTESEYNWIEVSNLDGTYPTLLFWQ---NLSEPRDIAV-------NPIGGIMYWCSWGD- 574 (1332)
Q Consensus 507 ~~~~~p~glAvDw-~~~~lYw~d~~~~~I~v~~l~g~~~~~l~~~---~~~~P~~iav-------dp~~G~lywtd~g~- 574 (1332)
..+..|.+||||+ -.++||+++...++|.+.++.+...++|+.. .+..|++|++ ++...+||.+|+..
T Consensus 136 ~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~ 215 (496)
T 3kya_A 136 CGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDG 215 (496)
T ss_dssp BCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCT
T ss_pred cccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCC
Confidence 3467899999998 4899999998888999999998887777743 3567999999 99877899999875
Q ss_pred ----CCceEEE--cCCCCce-----EEEEeCCCCCceeeEEeccCCeEEEEeCCCCeEEEEecC-------CCceEEEEe
Q psy5806 575 ----LHKIEMA--GMDGSHR-----HILASDSLKNPTGLAIDLENSRLYWANVGLKTIEFTNLD-------GTRKQTLIA 636 (1332)
Q Consensus 575 ----~~~I~r~--~~dG~~~-----~~l~~~~l~~p~glaiD~~~~rLYw~d~~~~~I~~~~~d-------G~~~~~~~~ 636 (1332)
.++|... ..+|.-. ..+. .+.+|+|+++|+.+++||++|...+.|.+++++ +....
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~--~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~---- 289 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIA--AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSW---- 289 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEE--EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCC----
T ss_pred CcccCceEEEEecCCCCceeecccceeec--cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceee----
Confidence 2345555 3334432 2333 467999999999999999999999999988876 21000
Q ss_pred ecceEEEeeecCceeEEEEeCCCCcCcCCCcCCCCCCccccccCCCCCceeeCCCCccccCCCCccccCCccceEeeccc
Q psy5806 637 LHHLKVMTKVVGLTDIDIFHRRRSKKTHPCNENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSENPSKFLLVSQTD 716 (1332)
Q Consensus 637 ~~~l~v~~~~~~~~~i~v~~~~~q~~~~pC~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~ll~s~~~ 716 (1332)
.|. . +.. + .
T Consensus 290 -------------------------------------------tp~---~-------------------~~~----~--g 298 (496)
T 3kya_A 290 -------------------------------------------DPI---V-------------------KNN----P--N 298 (496)
T ss_dssp -------------------------------------------CCB---G-------------------GGC----T--T
T ss_pred -------------------------------------------ccc---c-------------------ccc----c--c
Confidence 000 0 000 0 0
Q ss_pred eeEEEecCCCCCcceeeecccccceeEEeecCCCceEEEEecCCCceEEEecCCCCc-----eEEEeC------------
Q psy5806 717 KIRQISLDVEYRYPIVLPLRQLKMVASVDVDTKNEYIYWSDISEKTIERVRFDMTGR-----ERLVVN------------ 779 (1332)
Q Consensus 717 ~i~~i~l~~~~~~~~~~~~~~~~~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~-----~~vi~~------------ 779 (1332)
.+..+ ..++....+..|++++..+.||++|...++|+++..++... .++...
T Consensus 299 ~~~~l-----------~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~ 367 (496)
T 3kya_A 299 TFKQL-----------FTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGT 367 (496)
T ss_dssp TEEEE-----------EECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGG
T ss_pred cccee-----------EecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCccc
Confidence 00000 01111223567889998888999999999999998887542 233321
Q ss_pred --CCCCcc-ceeEec------CCCeEEEEeCCCCeEEEEeCCCCceEEEEe---------------c-------CCCCCe
Q psy5806 780 --DLNRTE-SIAVDA------IGRKIYWTDMNAQTIMVSDIDGKNAKVLFW---------------L-------NLYRPR 828 (1332)
Q Consensus 780 --~~~~p~-glAvD~------~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~---------------~-------~~~~P~ 828 (1332)
.+..|. |+++|- ..++||++|..+++|.+.+.+|...++.-. . .+..|.
T Consensus 368 ~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~ 447 (496)
T 3kya_A 368 EARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVS 447 (496)
T ss_dssp GCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEE
T ss_pred ccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCc
Confidence 256799 888873 567899999999999999999965554321 0 256799
Q ss_pred EEEEeCCCCeEEEEecccCcCCCCceEEEecCCCC
Q psy5806 829 SIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTN 863 (1332)
Q Consensus 829 ~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~ 863 (1332)
+||+++.+|.||++|.+++ +|++..++|..
T Consensus 448 gIavd~~~g~lyVaD~~N~-----rIrki~~~~~~ 477 (496)
T 3kya_A 448 GLVYDDVKEMFYVHDQVGH-----TIRTISMEQEE 477 (496)
T ss_dssp EEEEETTTTEEEEEETTTT-----EEEEEEECCCC
T ss_pred EEEEECCCCEEEEEeCCCC-----EEEEEECCCCc
Confidence 9999998899999998866 89999998764
No 32
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.67 E-value=7.3e-15 Score=176.48 Aligned_cols=222 Identities=15% Similarity=0.142 Sum_probs=161.1
Q ss_pred ceEEEEee--cceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCC-eEEEEECCCCCCceeEe---ec
Q psy5806 1013 EFLLYTSR--FGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSG-NLRTFDMSDSTRIKPIP---LM 1086 (1332)
Q Consensus 1013 ~~ll~~~~--~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~-~I~~~~l~~g~~~~~i~---~~ 1086 (1332)
..|+++.. +. |++++++....... . .....+. +++++.++.|||++...+ .|++++...+.....+. ..
T Consensus 142 g~lyv~d~~~~~-I~~id~~~g~~~~~-~--~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~ 216 (409)
T 3hrp_A 142 NTVLAYQRDDPR-VRLISVDDNKVTTV-H--PGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGST 216 (409)
T ss_dssp TEEEEEETTTTE-EEEEETTTTEEEEE-E--ETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTT
T ss_pred CCEEEEecCCCc-EEEEECCCCEEEEe-e--ccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccch
Confidence 34555543 45 88888764322111 1 1233455 899999999999998665 89999966332222221 11
Q ss_pred CCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEEE----ecC--CCCce-EEEEcCCCcEEEEEecCCCCCCCCC
Q psy5806 1087 NDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKIL----VND--LMEPL-AIAVYPRRGLLFYSHWGLYDNSPTT 1159 (1332)
Q Consensus 1087 ~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~~----~~~--~~~P~-~iavdp~~g~Lywtd~~~~~~~~~~ 1159 (1332)
....|.++|+|+.+++||+++. .++|.++++++.....+ ..+ ...|. +|+++|..|.||+++... +
T Consensus 217 ~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~------~ 289 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL------S 289 (409)
T ss_dssp SCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT------T
T ss_pred hcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC------C
Confidence 4568999999988999999876 67899999986654444 211 12377 999999889999999876 7
Q ss_pred cEEEEecCCCceEEEEecC--------------CCCcceEEEecCCCEEEEEEc-CCCeEEEEe-cCCCceEEEEe----
Q psy5806 1160 KIEKVYLDGSYRTVLVEED--------------LAFPNELAIDFKQRRLFWADS-TNKRIEYCD-FFGRSRKIVIS---- 1219 (1332)
Q Consensus 1160 ~I~r~~ldG~~~~~l~~~~--------------l~~p~glaiD~~~~~LY~~d~-~~~~I~~~d-~dG~~~~~~~~---- 1219 (1332)
+|++++++|.. ..+.... +..|+||++|+++. ||++|. .+++|.+++ .+|. ...+..
T Consensus 290 ~I~~~~~~g~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~~ 366 (409)
T 3hrp_A 290 SVYKITPDGEC-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDGY-VSTVAGQVDV 366 (409)
T ss_dssp EEEEECTTCCE-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTTE-EEEEEECTTC
T ss_pred EEEEEecCCCE-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCCE-EEEEeCCCCC
Confidence 99999999973 3444322 67899999998755 999999 999999999 4554 333332
Q ss_pred ------------ecccceEEEecCCccccccEEEEEECCCCEEEEEEe
Q psy5806 1220 ------------KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIARE 1255 (1332)
Q Consensus 1220 ------------~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~ 1255 (1332)
+..|.||++ +.++.||++|+.+++|.++.+
T Consensus 367 ~g~~~g~~~~~~~~~P~giav------d~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 367 ASQIDGTPLEATFNYPYDICY------DGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp BSCCCBSTTTCCBSSEEEEEE------CSSSEEEEEESTTCEEEEEEE
T ss_pred CCcCCCChhceEeCCceEEEE------cCCCCEEEEECCCCeEEEEEe
Confidence 357999999 345899999999999999875
No 33
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.66 E-value=1.2e-13 Score=157.18 Aligned_cols=277 Identities=13% Similarity=0.107 Sum_probs=199.0
Q ss_pred cccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEe--ccCCcceEEEEe-CCEEEEEeCCCCEEEEEECCCCeE
Q psy5806 871 VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAY--AVQSHPYTLTVL-DYYVYWTDVQHSKIYRANKYDVKD 947 (1332)
Q Consensus 871 l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~--~~~~~P~~la~~-~~~iywtD~~~~~i~~~~~~~g~~ 947 (1332)
...|.+|++|..+ +||+++...+.|..++.+|. ...+. .....|.+|++. ++.||+++...+.|.+.+.. +
T Consensus 14 ~~~~~~i~~d~~g--~l~v~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g-- 87 (299)
T 2z2n_A 14 DTGPYGITVSDKG--KVWITQHKANMISCINLDGK-ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G-- 87 (299)
T ss_dssp SCCEEEEEECTTS--CEEEEETTTTEEEEECTTCC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S--
T ss_pred CCCccceEECCCC--CEEEEecCCCcEEEEcCCCC-eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C--
Confidence 6788999999876 79999988889999998844 33332 245678899986 56888888777776653211 0
Q ss_pred EEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEEeecceEEEE
Q psy5806 948 IVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRI 1027 (1332)
Q Consensus 948 i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i 1027 (1332)
. +..+
T Consensus 88 --------------------------------------------------------------------------~-~~~~ 92 (299)
T 2z2n_A 88 --------------------------------------------------------------------------I-IKEY 92 (299)
T ss_dssp --------------------------------------------------------------------------C-EEEE
T ss_pred --------------------------------------------------------------------------c-EEEE
Confidence 0 0111
Q ss_pred eCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEc
Q psy5806 1028 SLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYID 1107 (1332)
Q Consensus 1028 ~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td 1107 (1332)
.+. .....|.+|++++. ++||+++...+.|++++.+ +.............|.+|++|. .++||+++
T Consensus 93 ~~~-----------~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~ 158 (299)
T 2z2n_A 93 TLP-----------NPDSAPYGITEGPN-GDIWFTEMNGNRIGRITDD-GKIREYELPNKGSYPSFITLGS-DNALWFTE 158 (299)
T ss_dssp ECS-----------STTCCEEEEEECTT-SCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECT-TSCEEEEE
T ss_pred eCC-----------CcCCCceeeEECCC-CCEEEEecCCceEEEECCC-CCEEEecCCCCCCCCceEEEcC-CCCEEEEe
Confidence 110 01224678888865 5799998888899999863 4433322223456799999995 56899999
Q ss_pred CCCceEEEEeeCCceEEE-EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEE
Q psy5806 1108 SQMHTINVARSDGQHKKI-LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELA 1186 (1332)
Q Consensus 1108 ~~~~~I~v~~ldG~~~~~-~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~gla 1186 (1332)
...+.|.+++.+|+.... +......|.+|++++ .|.||+++... ..|.+++.+|.............|.+|+
T Consensus 159 ~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~~~~~~~~i~ 231 (299)
T 2z2n_A 159 NQNNAIGRITESGDITEFKIPTPASGPVGITKGN-DDALWFVEIIG------NKIGRITTSGEITEFKIPTPNARPHAIT 231 (299)
T ss_dssp TTTTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSSEEEEETTT------TEEEEECTTCCEEEEECSSTTCCEEEEE
T ss_pred CCCCEEEEEcCCCcEEEeeCCCCCCcceeEEECC-CCCEEEEccCC------ceEEEECCCCcEEEEECCCCCCCceeEE
Confidence 888899999887776554 334567899999999 58899998765 6799999976544322333457899999
Q ss_pred EecCCCEEEEEEcCCCeEEEEecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1187 IDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1187 iD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
+|.+ ++||+++...+.|.+++.+|..+..... ...|.+|++ .++.||+++. .+.|.+++..++
T Consensus 232 ~~~~-g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~-------~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 232 AGAG-IDLWFTEWGANKIGRLTSNNIIEEYPIQIKSAEPHGICF-------DGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp ECST-TCEEEEETTTTEEEEEETTTEEEEEECSSSSCCEEEEEE-------CSSCEEEEET-TTEEEEEEEC--
T ss_pred ECCC-CCEEEeccCCceEEEECCCCceEEEeCCCCCCccceEEe-------cCCCEEEEec-CCcEEEEEcCcc
Confidence 9976 5699999888999999997643333233 578999999 8899999987 689999997664
No 34
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.66 E-value=1.2e-13 Score=157.27 Aligned_cols=281 Identities=14% Similarity=0.170 Sum_probs=203.9
Q ss_pred CCCCCCccEEEeccCCeEEEEeCCCCeEEEEeCCCCCcEEEEeCCCCCceEEEEecCCCeEEEEecCCCCceEEEcCCCC
Q psy5806 507 HNTKKPAGVAIDWRTNKLYWTESEYNWIEVSNLDGTYPTLLFWQNLSEPRDIAVNPIGGIMYWCSWGDLHKIEMAGMDGS 586 (1332)
Q Consensus 507 ~~~~~p~glAvDw~~~~lYw~d~~~~~I~v~~l~g~~~~~l~~~~~~~P~~iavdp~~G~lywtd~g~~~~I~r~~~dG~ 586 (1332)
.....|.+|++|. .++||+++...+.|.+.+.+|+.....+...+..|.+|++++. |.||+++.+ ..+|.+.+.+|.
T Consensus 17 ~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~-~~~v~~~d~~g~ 93 (300)
T 2qc5_A 17 IPDSGPYGITSSE-DGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSL-GDIWFTENG-ANKIGKLSKKGG 93 (300)
T ss_dssp STTCCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTT-SCEEEEETT-TTEEEEECTTSC
T ss_pred CCCCCcceeeECC-CCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCC-CCEEEEecC-CCeEEEECCCCC
Confidence 4467899999997 4789999988899999998866554334345688999999975 889999854 467999988876
Q ss_pred ceEEEEeCCCCCceeeEEeccCCeEEEEeCCCCeEEEEecCCCceEEEEeecceEEEeeecCceeEEEEeCCCCcCcCCC
Q psy5806 587 HRHILASDSLKNPTGLAIDLENSRLYWANVGLKTIEFTNLDGTRKQTLIALHHLKVMTKVVGLTDIDIFHRRRSKKTHPC 666 (1332)
Q Consensus 587 ~~~~l~~~~l~~p~glaiD~~~~rLYw~d~~~~~I~~~~~dG~~~~~~~~~~~l~v~~~~~~~~~i~v~~~~~q~~~~pC 666 (1332)
.+..........|.+|++|. .++||+++...+.|.+++.+|.... +
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~-~-------------------------------- 139 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTADGTIYE-Y-------------------------------- 139 (300)
T ss_dssp EEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTTSCEEE-E--------------------------------
T ss_pred eEEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCCCCEEE-c--------------------------------
Confidence 54333333457899999996 5679999877667766655532110 0
Q ss_pred cCCCCCCccccccCCCCCceeeCCCCccccCCCCccccCCccceEeeccceeEEEecCCCCCcceeeecccccceeEEee
Q psy5806 667 NENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSENPSKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMVASVDV 746 (1332)
Q Consensus 667 ~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~~~id~ 746 (1332)
.+.. ....+.++++
T Consensus 140 -------------------------------------------------------~~~~-----------~~~~~~~i~~ 153 (300)
T 2qc5_A 140 -------------------------------------------------------DLPN-----------KGSYPAFITL 153 (300)
T ss_dssp -------------------------------------------------------ECSS-----------TTCCEEEEEE
T ss_pred -------------------------------------------------------cCCC-----------CCCCceeEEE
Confidence 0000 1123456677
Q ss_pred cCCCceEEEEecCCCceEEEecCCCCceEEEeCCCCCccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEecCCCC
Q psy5806 747 DTKNEYIYWSDISEKTIERVRFDMTGRERLVVNDLNRTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFWLNLYR 826 (1332)
Q Consensus 747 d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~~~~~ 826 (1332)
|+. +++|+++...+.|.+++.+|.............|.+|++|.. ++||+++...+.|.+.+.+|+............
T Consensus 154 d~~-g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~ 231 (300)
T 2qc5_A 154 GSD-NALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGND-GALWFVEIMGNKIGRITTTGEISEYDIPTPNAR 231 (300)
T ss_dssp CTT-SSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTT-SSEEEEETTTTEEEEECTTCCEEEEECSSTTCC
T ss_pred CCC-CCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECCC-CCEEEEccCCCEEEEEcCCCcEEEEECCCCCCC
Confidence 765 569999988888999988655433212234678999999975 579999999999999999887665544445678
Q ss_pred CeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEecc-cccCceeEEeCCCCCeEEEEeCCCCeEEEEcc
Q psy5806 827 PRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFETE-VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTL 902 (1332)
Q Consensus 827 P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~~-l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~ 902 (1332)
|.+|++++. |.||+++.+.+ +|.+...+|......... ...|.++++|..+ +||+++. . .|.++++
T Consensus 232 ~~~i~~d~~-g~l~v~~~~~~-----~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g--~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 232 PHAITAGKN-SEIWFTEWGAN-----QIGRITNDNTIQEYQLQTENAEPHGITFGKDG--SVWFALK-C-KIGKLNL 298 (300)
T ss_dssp EEEEEECST-TCEEEEETTTT-----EEEEECTTSCEEEEECCSTTCCCCCEEECTTS--CEEEECS-S-EEEEEEE
T ss_pred ceEEEECCC-CCEEEeccCCC-----eEEEECCCCcEEEEECCccCCccceeEeCCCC--CEEEEcc-C-ceEEeCC
Confidence 999999987 88999997644 799988877544332332 6789999999876 7999987 5 8887765
No 35
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.65 E-value=4.5e-15 Score=172.94 Aligned_cols=225 Identities=16% Similarity=0.106 Sum_probs=162.9
Q ss_pred CccceEEEEEeCCCcEEEEEeCCC------------------------CeEEEEECCCCCCceeEeecCCCCceeeEEEe
Q psy5806 1043 EYMSSIFFDYHYSKNLIYFADMRS------------------------GNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDW 1098 (1332)
Q Consensus 1043 ~~~~~~~id~d~~~~~lY~sd~~~------------------------~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw 1098 (1332)
.+..+.+|++++.+ +||+++... ++|++++..+|.-........+..|.|||+|.
T Consensus 22 ~l~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 22 LPGQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CCSCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT
T ss_pred ecCCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC
Confidence 35678999999874 799999766 46888886544433222223356899999996
Q ss_pred cCCeEEEEcCCCceEEEEeeCCc--eEEEE---------ecCCCCceEEEEcCCCcEEEEEec-CCCCCCCCCcEEEEec
Q psy5806 1099 VANNIYYIDSQMHTINVARSDGQ--HKKIL---------VNDLMEPLAIAVYPRRGLLFYSHW-GLYDNSPTTKIEKVYL 1166 (1332)
Q Consensus 1099 ~~~~LY~td~~~~~I~v~~ldG~--~~~~~---------~~~~~~P~~iavdp~~g~Lywtd~-~~~~~~~~~~I~r~~l 1166 (1332)
.++||+++...++|.+++.+|. ....+ ...+..|.+||++|.+|.||+++. +. .+|.+.+.
T Consensus 101 -~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~------~~I~~~~~ 173 (329)
T 3fvz_A 101 -DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCN------SRIVQFSP 173 (329)
T ss_dssp -TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSC------CEEEEECT
T ss_pred -CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCC------CeEEEEcC
Confidence 5559999999999999999987 33334 234568999999998899999996 55 78999999
Q ss_pred CCCceEEEEe---------cCCCCcceEEEecCCCEEEEEEcCCCeEEEEecC-CCceEEEEe---ecccceEEEecCCc
Q psy5806 1167 DGSYRTVLVE---------EDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFF-GRSRKIVIS---KVAPYGLSVRQSPG 1233 (1332)
Q Consensus 1167 dG~~~~~l~~---------~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~d-G~~~~~~~~---~~~P~glav~~~~~ 1233 (1332)
+|.....+.. ..+..|.||++|+++++||++|..+++|.+++.+ |+....+.. ...|+++++.....
T Consensus 174 ~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~ 253 (329)
T 3fvz_A 174 SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFL 253 (329)
T ss_dssp TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEE
T ss_pred CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEE
Confidence 9987666642 2346699999999889999999999999999998 765555532 44556555510000
Q ss_pred cccccEEEEEECCCCEEEEEEecCCCCcceEEEEe---cCCCCeeeEE
Q psy5806 1234 KAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIR---SNQEDFLNIK 1278 (1332)
Q Consensus 1234 ~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~---~~~~~~~~i~ 1278 (1332)
-+.++.+|+++...++|+.++..+| +....+. .....|.+|.
T Consensus 254 ~~~~g~~~v~~~~~~~v~~~~~~~g---~~~~~~~~~~~~~~~p~~ia 298 (329)
T 3fvz_A 254 FAVNGKPYFGDQEPVQGFVMNFSSG---EIIDVFKPVRKHFDMPHDIV 298 (329)
T ss_dssp EEEECCCCTTCSCCCCEEEEETTTC---CEEEEECCSSSCCSSEEEEE
T ss_pred EEeCCCEEeccCCCcEEEEEEcCCC---eEEEEEcCCCCccCCeeEEE
Confidence 0235567777777889999998887 5555542 3344566664
No 36
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.65 E-value=2.9e-14 Score=171.61 Aligned_cols=262 Identities=14% Similarity=0.154 Sum_probs=191.9
Q ss_pred ccceEEEEEEc-cCCeEEEEcCCCceEEEEEecCcceEEEEeCC---CCCCccEEE-------eccCCeEEEEeCCC---
Q psy5806 466 VKSVVAIAWES-ANDSLYWADVENGEINRAHINGTFQYNVIRHN---TKKPAGVAI-------DWRTNKLYWTESEY--- 531 (1332)
Q Consensus 466 ~~~~~~i~~d~-~~~~lywsD~~~~~I~r~~~~g~~~~~v~~~~---~~~p~glAv-------Dw~~~~lYw~d~~~--- 531 (1332)
+..+.+|+||+ ..++||+++...+.|+++++.+....+++..+ +..|.+||+ |..++.||+++...
T Consensus 138 ~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 138 FSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp CCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred cCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 55688999999 58999999988889999999887777777643 457999999 98888899998765
Q ss_pred ---CeEEEEeC--CCCCc-----EEEEeCCCCCceEEEEecCCCeEEEEecCCCCceEEEcCC--------CCc------
Q psy5806 532 ---NWIEVSNL--DGTYP-----TLLFWQNLSEPRDIAVNPIGGIMYWCSWGDLHKIEMAGMD--------GSH------ 587 (1332)
Q Consensus 532 ---~~I~v~~l--~g~~~-----~~l~~~~~~~P~~iavdp~~G~lywtd~g~~~~I~r~~~d--------G~~------ 587 (1332)
..|.+.+. +|... ..+. .+..|.+|++||..|+||+++++ ..+|.+..++ |..
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~--~~~~p~giavdp~~g~LYvtd~~-~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIA--AYKQCNGATIHPINGELYFNSYE-KGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEE--EESCCCCEEECTTTCCEEEEETT-TTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred ccCceEEEEecCCCCceeecccceeec--cCCCceEEEEcCCCCeEEEEECC-CCEEEEEecccccccccCceeeccccc
Confidence 23666643 34553 2333 46799999999999999999987 4689999987 332
Q ss_pred -----eEEEE-eCCCCCceeeEEeccCCeEEEEeCCCCeEEEEecCCCceE-----EEEeecceEEEeeecCceeEEEEe
Q psy5806 588 -----RHILA-SDSLKNPTGLAIDLENSRLYWANVGLKTIEFTNLDGTRKQ-----TLIALHHLKVMTKVVGLTDIDIFH 656 (1332)
Q Consensus 588 -----~~~l~-~~~l~~p~glaiD~~~~rLYw~d~~~~~I~~~~~dG~~~~-----~~~~~~~l~v~~~~~~~~~i~v~~ 656 (1332)
...+. ...-.||.+|++|+..+.||++|...++|.++++||.... ++..
T Consensus 295 ~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG-------------------- 354 (496)
T 3kya_A 295 NNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVG-------------------- 354 (496)
T ss_dssp GCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEE--------------------
T ss_pred ccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecC--------------------
Confidence 12333 3345789999999999999999999999999999986432 1110
Q ss_pred CCCCcCcCCCcCCCCCCccccccCCCCCceeeCCCCccccCCCCccccCCccceEeeccceeEEEecCCCCCcceeeecc
Q psy5806 657 RRRSKKTHPCNENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSENPSKFLLVSQTDKIRQISLDVEYRYPIVLPLR 736 (1332)
Q Consensus 657 ~~~q~~~~pC~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~ 736 (1332)
. ++ ..|+. |+. ....
T Consensus 355 -~----------------------~g-------~~G~~---DG~--------------------------------~~~a 369 (496)
T 3kya_A 355 -G----------------------YK-------QSGYR---DDV--------------------------------GTEA 369 (496)
T ss_dssp -B----------------------TT-------BCCCB---CCB--------------------------------GGGC
T ss_pred -C----------------------CC-------CCccc---CCc--------------------------------cccc
Confidence 0 00 01111 110 0001
Q ss_pred ccccee-EEeecC------CCceEEEEecCCCceEEEecCCCCceEEEeC-----------------------CCCCccc
Q psy5806 737 QLKMVA-SVDVDT------KNEYIYWSDISEKTIERVRFDMTGRERLVVN-----------------------DLNRTES 786 (1332)
Q Consensus 737 ~~~~~~-~id~d~------~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~-----------------------~~~~p~g 786 (1332)
.+..|. .+.+|. .++.||++|...++|+++.++| ...++... .+..|.|
T Consensus 370 ~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~g 448 (496)
T 3kya_A 370 RMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEG-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSG 448 (496)
T ss_dssp BCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTC-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEE
T ss_pred ccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCC-CEEEEecccccccccCccccccCCCCchhhhhcCCCcE
Confidence 344555 455542 5689999999999999999887 44555432 1567999
Q ss_pred eeEecCCCeEEEEeCCCCeEEEEeCCCCce
Q psy5806 787 IAVDAIGRKIYWTDMNAQTIMVSDIDGKNA 816 (1332)
Q Consensus 787 lAvD~~~~nLYwtD~~~~~I~v~~ldG~~~ 816 (1332)
||+|..+++||++|..+++|.+.++++...
T Consensus 449 Iavd~~~g~lyVaD~~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 449 LVYDDVKEMFYVHDQVGHTIRTISMEQEEN 478 (496)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECCCC-
T ss_pred EEEECCCCEEEEEeCCCCEEEEEECCCCcc
Confidence 999988789999999999999999987643
No 37
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.65 E-value=5.4e-17 Score=144.33 Aligned_cols=72 Identities=35% Similarity=0.856 Sum_probs=66.2
Q ss_pred CCCCCCEEecCCCEEEeeeecCCCCCCCCCCCcccccc-cCCCCCccccCCCCCCCCcccCCCccCCCCceecCCCceec
Q psy5806 58 KCSPDEHRCTTGHCILKTWLCDGIPDCSLGEDERNCNK-TCDAQKEFSCMKLAEPRPTEVGSNIKYFPLHTVRAPRKDCF 136 (1332)
Q Consensus 58 ~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~C~~-~C~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ci 136 (1332)
.|++.+|+|.+|+||+..|+|||..||.|||||.+|.. .|.+. +|+|.+ + .||
T Consensus 2 ~C~~~~F~C~~g~CI~~~~~CDg~~DC~DgSDE~~C~~~~C~~~-~f~C~~------------------------g-~Ci 55 (80)
T 2fcw_B 2 TCSQAEFRCHDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPA-SFQCNS------------------------S-TCI 55 (80)
T ss_dssp CCCTTEEECTTSCEEEGGGTTSSSCCSTTCTTTTTHHHHHCCTT-EEECTT------------------------S-CEE
T ss_pred CCCCCccCCCCCCEEeeecccCCcccCCCcccccccccccCCce-eeECCC------------------------C-CEE
Confidence 58899999999999999999999999999999999975 48887 999976 3 599
Q ss_pred CCccccCCCCCCCCCCCCC
Q psy5806 137 SKKYLCDGKKHCPRGEEGP 155 (1332)
Q Consensus 137 ~~~~~Cdg~~dC~dg~de~ 155 (1332)
+..|+|||..||.||+||.
T Consensus 56 ~~~~~CDg~~DC~dgsDE~ 74 (80)
T 2fcw_B 56 PQLWACDNDPDCEDGSDEW 74 (80)
T ss_dssp EGGGTTSSSCCSTTCGGGC
T ss_pred ecccccCCCcCCCCCCCcC
Confidence 9999999999999999994
No 38
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.64 E-value=1.9e-16 Score=141.94 Aligned_cols=73 Identities=30% Similarity=0.825 Sum_probs=65.8
Q ss_pred CCCCCCCEEecCCCEEEeeeecCCCCCCCCCCCc-ccccc-cCCCCCccccCCCCCCCCcccCCCccCCCCceecCCCce
Q psy5806 57 KKCSPDEHRCTTGHCILKTWLCDGIPDCSLGEDE-RNCNK-TCDAQKEFSCMKLAEPRPTEVGSNIKYFPLHTVRAPRKD 134 (1332)
Q Consensus 57 ~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE-~~C~~-~C~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (1332)
..|.+.+|+|.+|+|||..|+|||..||.||||| .+|.. .|.+..+|+|.+ + .
T Consensus 3 ~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~~C~~~~C~~~~~f~C~~------------------------g-~ 57 (82)
T 2fyj_A 3 RTCPPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAYPTCFPLTQFTCNN------------------------G-R 57 (82)
T ss_dssp SSSCTTEEETTSSCEEETTSSSSCSSSSCSTTTTTSSCCCSSSCSSSEEECTT------------------------S-C
T ss_pred CCCCCCceEeCCCCEEeccccCCCcccCCCccccccccccccCCCCCceECCC------------------------C-C
Confidence 4689999999999999999999999999999999 89975 486533899987 3 5
Q ss_pred ecCCccccCCCCCCCCCCCC
Q psy5806 135 CFSKKYLCDGKKHCPRGEEG 154 (1332)
Q Consensus 135 Ci~~~~~Cdg~~dC~dg~de 154 (1332)
||+..++|||..||.||+||
T Consensus 58 CI~~~~~CDG~~DC~DgSDE 77 (82)
T 2fyj_A 58 CININWRCDNDNDCGDNSDE 77 (82)
T ss_dssp EEETTCBSSSSBCCSSSSSC
T ss_pred eEcHHHccCCCCcCCCCccc
Confidence 99999999999999999999
No 39
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.63 E-value=1.3e-14 Score=163.13 Aligned_cols=204 Identities=19% Similarity=0.254 Sum_probs=153.1
Q ss_pred cccccCCcc---ceEEEEEeCCCcEEEE-EeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCce
Q psy5806 1037 VTLPFPEYM---SSIFFDYHYSKNLIYF-ADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHT 1112 (1332)
Q Consensus 1037 ~~~pi~~~~---~~~~id~d~~~~~lY~-sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~ 1112 (1332)
...|+.++. .|.+|++++.+ +||+ ++...+.|.+++.. +.....+...+...|.+|++|.. ++||+++. .+.
T Consensus 13 ~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~-~~~ 88 (270)
T 1rwi_B 13 TVLPFTGIDFRLSPSGVAVDSAG-NVYVTSEGMYGRVVKLATG-STGTTVLPFNGLYQPQGLAVDGA-GTVYVTDF-NNR 88 (270)
T ss_dssp EECCCCSCSSCCCEEEEEECTTC-CEEEEECSSSCEEEEECC------EECCCCSCCSCCCEEECTT-CCEEEEET-TTE
T ss_pred ccCccccccccCCccceEECCCC-CEEEEccCCCCcEEEecCC-CcccceEeeCCcCCcceeEECCC-CCEEEEcC-CCE
Confidence 344555555 89999999876 4999 88888999998854 22222222234568999999974 56999998 779
Q ss_pred EEEEeeCCceEEEE-ecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCC
Q psy5806 1113 INVARSDGQHKKIL-VNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQ 1191 (1332)
Q Consensus 1113 I~v~~ldG~~~~~~-~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~ 1191 (1332)
|.+++.+|.....+ ..++..|.+|+++| +|.||+++.+. +.|.+.+.............+..|++|++|+++
T Consensus 89 i~~~d~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~------~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g 161 (270)
T 1rwi_B 89 VVTLAAGSNNQTVLPFDGLNYPEGLAVDT-QGAVYVADRGN------NRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSG 161 (270)
T ss_dssp EEEECTTCSCCEECCCCSCSSEEEEEECT-TCCEEEEEGGG------TEEEEECTTCCSCEECCCCSCCSCCCEEECTTC
T ss_pred EEEEeCCCceEeeeecCCcCCCcceEECC-CCCEEEEECCC------CEEEEEECCCceeEeeccccCCCceeEEEeCCC
Confidence 99999998765543 24557899999999 78899999765 679998654433333333445689999999765
Q ss_pred CEEEEEEcCCCeEEEEecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1192 RRLFWADSTNKRIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1192 ~~LY~~d~~~~~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
+||+++...++|.+++.++........ ...|.+|++ +.+++||++++..+.|.+++..+.
T Consensus 162 -~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~------d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 162 -NVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAV------DEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp -CEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEE------CTTCCEEEEETTTSCEEEECTTCS
T ss_pred -CEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEE------CCCCCEEEEECCCCcEEEEcCCCC
Confidence 599999989999999998876544333 588999999 345699999999999999997654
No 40
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.62 E-value=6.4e-13 Score=151.08 Aligned_cols=281 Identities=15% Similarity=0.180 Sum_probs=196.3
Q ss_pred cCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEecc-cccCceeEEeCCCCCeEEEEeCCCCeEEEE
Q psy5806 822 LNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFETE-VIWPSCLAIDYSDNPKLYWVDTSKHTIEYK 900 (1332)
Q Consensus 822 ~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~~-l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~ 900 (1332)
.....|++|++|+. |.||+++... ..|.+.+.+|......... ...|.++++|..+ +||+++...+.|..+
T Consensus 12 ~~~~~~~~i~~d~~-g~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~ 83 (299)
T 2z2n_A 12 NQDTGPYGITVSDK-GKVWITQHKA-----NMISCINLDGKITEYPLPTPDAKVMCLTISSDG--EVWFTENAANKIGRI 83 (299)
T ss_dssp SSSCCEEEEEECTT-SCEEEEETTT-----TEEEEECTTCCEEEEECSSTTCCEEEEEECTTS--CEEEEETTTTEEEEE
T ss_pred CcCCCccceEECCC-CCEEEEecCC-----CcEEEEcCCCCeEEecCCcccCceeeEEECCCC--CEEEeCCCCCeEEEE
Confidence 34568999999987 8999988643 3688888885433322222 5678999999865 899999888899999
Q ss_pred ccCCCceeEEec-cCCcceEEEEe-CCEEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCC
Q psy5806 901 TLATGRAKRAYA-VQSHPYTLTVL-DYYVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGG 978 (1332)
Q Consensus 901 ~~dG~~~~~l~~-~~~~P~~la~~-~~~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGg 978 (1332)
+.+|........ ....|.+|++. ++.||+++...+.|.+.+. +++
T Consensus 84 ~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-------------------------------- 130 (299)
T 2z2n_A 84 TKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK-------------------------------- 130 (299)
T ss_dssp CTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC--------------------------------
T ss_pred CCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCC--------------------------------
Confidence 988654332222 45688999988 5688888877777765332 110
Q ss_pred CccccccCCCCccccCCCCeeEccCCccccccCcceEEEEeecceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcE
Q psy5806 979 CSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNL 1058 (1332)
Q Consensus 979 CshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~ 1058 (1332)
+..+.+. .....+.++++++.+ +
T Consensus 131 ---------------------------------------------~~~~~~~-----------~~~~~~~~i~~~~~g-~ 153 (299)
T 2z2n_A 131 ---------------------------------------------IREYELP-----------NKGSYPSFITLGSDN-A 153 (299)
T ss_dssp ---------------------------------------------EEEEECS-----------STTCCEEEEEECTTS-C
T ss_pred ---------------------------------------------EEEecCC-----------CCCCCCceEEEcCCC-C
Confidence 0000000 011236778888654 7
Q ss_pred EEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEE-EecCCCCceEEE
Q psy5806 1059 IYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKI-LVNDLMEPLAIA 1137 (1332)
Q Consensus 1059 lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~-~~~~~~~P~~ia 1137 (1332)
||+++...+.|++++. ++.............|.+|++|.. ++||+++...+.|.+++.+|+.... +......|.+|+
T Consensus 154 l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~ 231 (299)
T 2z2n_A 154 LWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGND-DALWFVEIIGNKIGRITTSGEITEFKIPTPNARPHAIT 231 (299)
T ss_dssp EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT-SSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEE
T ss_pred EEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCC-CCEEEEccCCceEEEECCCCcEEEEECCCCCCCceeEE
Confidence 9999877888999986 343332222334567999999964 6799999888899999997775544 333557899999
Q ss_pred EcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCC
Q psy5806 1138 VYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGR 1212 (1332)
Q Consensus 1138 vdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~ 1212 (1332)
+|+ .|.||+++.+. ..|.+.+.+|......+......|.+|++ .+++||+++. .+.|.+++.+..
T Consensus 232 ~~~-~g~l~v~~~~~------~~i~~~d~~g~~~~~~~~~~~~~~~~i~~--~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 232 AGA-GIDLWFTEWGA------NKIGRLTSNNIIEEYPIQIKSAEPHGICF--DGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp ECS-TTCEEEEETTT------TEEEEEETTTEEEEEECSSSSCCEEEEEE--CSSCEEEEET-TTEEEEEEEC--
T ss_pred ECC-CCCEEEeccCC------ceEEEECCCCceEEEeCCCCCCccceEEe--cCCCEEEEec-CCcEEEEEcCcc
Confidence 999 58899998665 67999999774333323344578999999 6788999986 678999887643
No 41
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.60 E-value=2e-13 Score=158.91 Aligned_cols=166 Identities=16% Similarity=0.117 Sum_probs=128.1
Q ss_pred ccceEEEEEEccCCeEEEEcCCCc------------------------eEEEEEec-CcceEEEEeCCCCCCccEEEecc
Q psy5806 466 VKSVVAIAWESANDSLYWADVENG------------------------EINRAHIN-GTFQYNVIRHNTKKPAGVAIDWR 520 (1332)
Q Consensus 466 ~~~~~~i~~d~~~~~lywsD~~~~------------------------~I~r~~~~-g~~~~~v~~~~~~~p~glAvDw~ 520 (1332)
+..+.+|++|+ +++||+++..++ .|++.+.+ |.-........+..|.|||+|.
T Consensus 23 l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~- 100 (329)
T 3fvz_A 23 PGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT- 100 (329)
T ss_dssp CSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT-
T ss_pred cCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC-
Confidence 45678999997 589999987663 57777765 4322222223456899999997
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCC--cEEEE--------eCCCCCceEEEEecCCCeEEEEecCCCCceEEEcCCCCceEE
Q psy5806 521 TNKLYWTESEYNWIEVSNLDGTY--PTLLF--------WQNLSEPRDIAVNPIGGIMYWCSWGDLHKIEMAGMDGSHRHI 590 (1332)
Q Consensus 521 ~~~lYw~d~~~~~I~v~~l~g~~--~~~l~--------~~~~~~P~~iavdp~~G~lywtd~g~~~~I~r~~~dG~~~~~ 590 (1332)
.++||+++...++|.+.+.+|.. ...+- ...+..|.+||++|..|.||++|.....+|.+...+|.....
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~ 180 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQ 180 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEE
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEE
Confidence 55699999999999999999873 33332 234678999999998899999995336899999999987666
Q ss_pred EEe---------CCCCCceeeEEeccCCeEEEEeCCCCeEEEEecC-CCceEE
Q psy5806 591 LAS---------DSLKNPTGLAIDLENSRLYWANVGLKTIEFTNLD-GTRKQT 633 (1332)
Q Consensus 591 l~~---------~~l~~p~glaiD~~~~rLYw~d~~~~~I~~~~~d-G~~~~~ 633 (1332)
+.. ..+..|.||++|+.+++||++|...++|...+.+ |...+.
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~ 233 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVRE 233 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 542 2456799999999889999999999999999988 664443
No 42
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.60 E-value=2.6e-14 Score=160.54 Aligned_cols=217 Identities=13% Similarity=0.180 Sum_probs=160.4
Q ss_pred cceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecC
Q psy5806 1021 FGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVA 1100 (1332)
Q Consensus 1021 ~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~ 1100 (1332)
+. |..++..... ....+......|.+|++++.++ ||+++. .+.|++++.+ +.....+...+...|.+|++|. .
T Consensus 46 ~~-i~~~~~~~~~--~~~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~~-~~~~~~~~~~~~~~p~~i~~~~-~ 118 (270)
T 1rwi_B 46 GR-VVKLATGSTG--TTVLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVVTLAAG-SNNQTVLPFDGLNYPEGLAVDT-Q 118 (270)
T ss_dssp CE-EEEECC-------EECCCCSCCSCCCEEECTTCC-EEEEET-TTEEEEECTT-CSCCEECCCCSCSSEEEEEECT-T
T ss_pred Cc-EEEecCCCcc--cceEeeCCcCCcceeEECCCCC-EEEEcC-CCEEEEEeCC-CceEeeeecCCcCCCcceEECC-C
Confidence 44 6666543221 1222334456788999998654 999997 8899999866 4433333323456899999997 5
Q ss_pred CeEEEEcCCCceEEEEeeCCceEEE-EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCC
Q psy5806 1101 NNIYYIDSQMHTINVARSDGQHKKI-LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDL 1179 (1332)
Q Consensus 1101 ~~LY~td~~~~~I~v~~ldG~~~~~-~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l 1179 (1332)
++||+++...+.|.+++........ ...++..|.+|+++| .|.||+++.+. ..|.+.+.++..........+
T Consensus 119 g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~------~~i~~~~~~~~~~~~~~~~~~ 191 (270)
T 1rwi_B 119 GAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN-SGNVYVTDTDN------NRVVKLEAESNNQVVLPFTDI 191 (270)
T ss_dssp CCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECT-TCCEEEEEGGG------TEEEEECTTTCCEEECCCSSC
T ss_pred CCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeC-CCCEEEEECCC------CEEEEEecCCCceEeecccCC
Confidence 6799999888899888654333333 334567899999999 67899999865 689999999877655444456
Q ss_pred CCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecC
Q psy5806 1180 AFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKS 1257 (1332)
Q Consensus 1180 ~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~ 1257 (1332)
..|.+|++|.++ +||+++...++|.+++.+|.....+.. ...|.+|++ +.++.||++++.+++|.++++..
T Consensus 192 ~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~------~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 192 TAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAV------DSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp CSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEE------CTTCCEEEEEGGGTEEEEECCCG
T ss_pred CCceEEEECCCC-CEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEE------CCCCCEEEEECCCCEEEEEcCCC
Confidence 789999999765 999999999999999999876544433 578999999 34568999999999999998764
Q ss_pred C
Q psy5806 1258 D 1258 (1332)
Q Consensus 1258 g 1258 (1332)
.
T Consensus 265 ~ 265 (270)
T 1rwi_B 265 H 265 (270)
T ss_dssp G
T ss_pred c
Confidence 3
No 43
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.56 E-value=4.3e-13 Score=153.77 Aligned_cols=217 Identities=11% Similarity=0.115 Sum_probs=160.2
Q ss_pred ccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceE
Q psy5806 1044 YMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHK 1123 (1332)
Q Consensus 1044 ~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~ 1123 (1332)
..-+.+..|++.++.|||+|...+.|+++++.++ ....+ .....|.+|+++..++ ||++. .+.|.++++++...
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~-~~~~~--~~~~~~~~i~~~~dG~-l~v~~--~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTK-QVQRV--TMDAPVSSVALRQSGG-YVATI--GTKFCALNWKEQSA 85 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTC-CEEEE--ECSSCEEEEEEBTTSS-EEEEE--TTEEEEEETTTTEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCC-cEEEE--eCCCceEEEEECCCCC-EEEEE--CCeEEEEECCCCcE
Confidence 3446899999999999999999999999997733 22222 2235799999997655 88876 45888888874443
Q ss_pred EEEec-----CCCCceEEEEcCCCcEEEEEecCCCC-----CCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCE
Q psy5806 1124 KILVN-----DLMEPLAIAVYPRRGLLFYSHWGLYD-----NSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRR 1193 (1332)
Q Consensus 1124 ~~~~~-----~~~~P~~iavdp~~g~Lywtd~~~~~-----~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~ 1193 (1332)
+.+.. ....|++|++|| .|.||+++.+... ......|++++.+|.... + ...+..|+||+++++++.
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~-~~~~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-Y-FDQVDISNGLDWSLDHKI 162 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-E-EEEESBEEEEEECTTSCE
T ss_pred EEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-E-eeccccccceEEcCCCCE
Confidence 33221 235689999999 6889998754310 013468999998875433 3 335788999999999999
Q ss_pred EEEEEcCCCeEEEEecC---CC--ceEEEEe----ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceE
Q psy5806 1194 LFWADSTNKRIEYCDFF---GR--SRKIVIS----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDV 1264 (1332)
Q Consensus 1194 LY~~d~~~~~I~~~d~d---G~--~~~~~~~----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~ 1264 (1332)
|||++...++|.+++++ |. +++++.. ...|.||++ +.+++||++++..++|.++++.+| +..
T Consensus 163 lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~------d~~G~lwva~~~~~~v~~~d~~tG---~~~ 233 (297)
T 3g4e_A 163 FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCI------DAEGKLWVACYNGGRVIRLDPVTG---KRL 233 (297)
T ss_dssp EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEE------BTTSCEEEEEETTTEEEEECTTTC---CEE
T ss_pred EEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEE------CCCCCEEEEEcCCCEEEEEcCCCc---eEE
Confidence 99999999999999975 32 2445544 368999999 556899999999999999999888 555
Q ss_pred EEEecCCCCeeeEE
Q psy5806 1265 HLIRSNQEDFLNIK 1278 (1332)
Q Consensus 1265 ~~~~~~~~~~~~i~ 1278 (1332)
..+......+..+.
T Consensus 234 ~~i~~p~~~~t~~~ 247 (297)
T 3g4e_A 234 QTVKLPVDKTTSCC 247 (297)
T ss_dssp EEEECSSSBEEEEE
T ss_pred EEEECCCCCceEEE
Confidence 55655555565554
No 44
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.55 E-value=2.8e-12 Score=149.26 Aligned_cols=205 Identities=13% Similarity=0.129 Sum_probs=148.0
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCC-----CCceeeEEEecCCeEEEEcCC-CceEEEEeeC
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMND-----TIRDNFVIDWVANNIYYIDSQ-MHTINVARSD 1119 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~-----~~p~glAvDw~~~~LY~td~~-~~~I~v~~ld 1119 (1332)
.|.+|++++.+ +||+++...+.|.++++.++.-...+. .+. ..|.+|+++ +++||+++.+ .+.|.++++.
T Consensus 85 ~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~-~g~~~~~~~~p~~i~~~--~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 85 SPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIE-CPDMDMESGSTEQMVQY--GKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp SEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEE-CTTCCTTTCBCCCEEEE--TTEEEEEECTTCCEEEEEETT
T ss_pred CCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEE-cCCccccCCCcceEEEE--CCEEEEEcCCCCCEEEEEECC
Confidence 46788887665 899999778999999977443222222 221 179999995 9999999984 7899999987
Q ss_pred -CceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCC----CCcEEEEecCCCceEEEEecC-CCCcceEEEecCCCE
Q psy5806 1120 -GQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSP----TTKIEKVYLDGSYRTVLVEED-LAFPNELAIDFKQRR 1193 (1332)
Q Consensus 1120 -G~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~----~~~I~r~~ldG~~~~~l~~~~-l~~p~glaiD~~~~~ 1193 (1332)
++....+..+ ..|.+|+++| .|.||++..+.+.+.+ ...|++++.........+... -..|++|++++++++
T Consensus 161 t~~~~~~i~~g-~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~ 238 (328)
T 3dsm_A 161 TDKVVDELTIG-IQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDT 238 (328)
T ss_dssp TTEEEEEEECS-SCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCE
T ss_pred CCeEEEEEEcC-CCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCE
Confidence 4444445433 5799999999 6889999876421111 267999998755443333321 247999999999999
Q ss_pred EEEEEcCCCeEEEEecCCCce--EEEEe--ecccceEEEecCCccccccEEEEEE----CCCCEEEEEEecCCCCcceEE
Q psy5806 1194 LFWADSTNKRIEYCDFFGRSR--KIVIS--KVAPYGLSVRQSPGKAFIVELYWTD----WEAMSVVIAREKSDTGQWDVH 1265 (1332)
Q Consensus 1194 LY~~d~~~~~I~~~d~dG~~~--~~~~~--~~~P~glav~~~~~~~~~~~lYwtd----~~~~~V~~~~~~~g~~~~~~~ 1265 (1332)
||+++. .|.++|.+.... ..++. ...|.+|++ ++.+++||+++ +.+++|.+++.. | +.+.
T Consensus 239 lyv~~~---~v~~~d~~t~~~~~~~~~~~~~~~p~gi~v-----dp~~g~lyva~~~~y~~~~~V~v~d~~-g---~~~~ 306 (328)
T 3dsm_A 239 LYWINN---DIWRMPVEADRVPVRPFLEFRDTKYYGLTV-----NPNNGEVYVADAIDYQQQGIVYRYSPQ-G---KLID 306 (328)
T ss_dssp EEEESS---SEEEEETTCSSCCSSCSBCCCSSCEEEEEE-----CTTTCCEEEEECTTSSSEEEEEEECTT-C---CEEE
T ss_pred EEEEcc---EEEEEECCCCceeeeeeecCCCCceEEEEE-----cCCCCeEEEEcccccccCCEEEEECCC-C---CEEE
Confidence 999986 899999975432 12222 478999999 44589999999 889999999987 6 4444
Q ss_pred EEe
Q psy5806 1266 LIR 1268 (1332)
Q Consensus 1266 ~~~ 1268 (1332)
.+.
T Consensus 307 ~i~ 309 (328)
T 3dsm_A 307 EFY 309 (328)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 45
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.52 E-value=1.2e-12 Score=148.72 Aligned_cols=198 Identities=14% Similarity=0.180 Sum_probs=154.7
Q ss_pred CccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeec-----CCCCceeeEEEecCCeEEEEcCC-CceEEEE
Q psy5806 1043 EYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLM-----NDTIRDNFVIDWVANNIYYIDSQ-MHTINVA 1116 (1332)
Q Consensus 1043 ~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~-----~~~~p~glAvDw~~~~LY~td~~-~~~I~v~ 1116 (1332)
.+..|.+|++++.+ .||+++...+.|.+++.+ +.....+... ....|.+||++...++||+++.. .+.|.++
T Consensus 28 ~~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 28 QFTEPSGVAVNAQN-DIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp CBSCEEEEEECTTC-CEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred ccCCCceEEECCCC-CEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 34578999999875 699999889999999866 4433333221 13579999997678999999975 7789999
Q ss_pred eeCCceEEEEe-cCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEe-cCCCCcceEEEecCCCEE
Q psy5806 1117 RSDGQHKKILV-NDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVE-EDLAFPNELAIDFKQRRL 1194 (1332)
Q Consensus 1117 ~ldG~~~~~~~-~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~-~~l~~p~glaiD~~~~~L 1194 (1332)
+.+|+....+. .....|++|+++| .|.||+++... .+|.+.+.+|.....+.. ..+..|++|++|++ ++|
T Consensus 106 d~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~-g~l 177 (286)
T 1q7f_A 106 NQYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECKV------MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDK-QEI 177 (286)
T ss_dssp CTTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETTT------TEEEEECTTSCEEEEEECTTTCSSEEEEEECSS-SEE
T ss_pred CCCCcEEEEecCccCCCceEEEEeC-CCCEEEEECCC------CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCC-CCE
Confidence 98888766543 3456899999999 67899998765 689999998876555432 34678999999975 679
Q ss_pred EEEEcCCCeEEEEecCCCceEEEEe---ecccceEEEecCCccccccEEEEEECCCC-EEEEEEec
Q psy5806 1195 FWADSTNKRIEYCDFFGRSRKIVIS---KVAPYGLSVRQSPGKAFIVELYWTDWEAM-SVVIAREK 1256 (1332)
Q Consensus 1195 Y~~d~~~~~I~~~d~dG~~~~~~~~---~~~P~glav~~~~~~~~~~~lYwtd~~~~-~V~~~~~~ 1256 (1332)
|+++...++|.+++.+|.....+.. ...|.+|++ +.+++||++++..+ .|.++++.
T Consensus 178 ~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~------d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 178 FISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGI------NSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp EEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEE------CTTCCEEEEECSSSCEEEEECTT
T ss_pred EEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEE------CCCCCEEEEeCCCCEEEEEECCC
Confidence 9999999999999998875544433 368999999 44679999999886 99999854
No 46
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.52 E-value=4.5e-13 Score=155.48 Aligned_cols=202 Identities=14% Similarity=0.196 Sum_probs=148.9
Q ss_pred ccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeec-------------------CCCCceeeEEEecCCeEE
Q psy5806 1044 YMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLM-------------------NDTIRDNFVIDWVANNIY 1104 (1332)
Q Consensus 1044 ~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~-------------------~~~~p~glAvDw~~~~LY 1104 (1332)
+..|.++++|+. +.+||++...+.|++++.. +...+.+... ....|.|||+|...++||
T Consensus 18 ~~~p~~i~~d~~-g~~l~v~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~ 95 (322)
T 2fp8_A 18 SYAPNSFTFDST-NKGFYTSVQDGRVIKYEGP-NSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLY 95 (322)
T ss_dssp SSCCCCEECCTT-CSSEEEECTTSEEEEECCT-TTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEE
T ss_pred cCCceEEEEcCC-CCEEEEEcCCCeEEEECCC-CCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEE
Confidence 456889999986 5678888889999999865 3223332211 124799999997678999
Q ss_pred EEcCCCceEEEEeeCCceEEEEec-----CCCCceEEEEcCCCcEEEEEecCCC-C----------CCCCCcEEEEecCC
Q psy5806 1105 YIDSQMHTINVARSDGQHKKILVN-----DLMEPLAIAVYPRRGLLFYSHWGLY-D----------NSPTTKIEKVYLDG 1168 (1332)
Q Consensus 1105 ~td~~~~~I~v~~ldG~~~~~~~~-----~~~~P~~iavdp~~g~Lywtd~~~~-~----------~~~~~~I~r~~ldG 1168 (1332)
+++... .|.+++.++...+.+.. .+..|.+|++||..|.||+++.+.. . ....++|++.+.++
T Consensus 96 v~d~~~-~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 96 IVDCYY-HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEETTT-EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEECCC-CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 999764 47778877544333321 3467999999996689999996520 0 01236799999876
Q ss_pred CceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCC---ceEEEEe-ecccceEEEecCCccccccEEEEEE
Q psy5806 1169 SYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGR---SRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTD 1244 (1332)
Q Consensus 1169 ~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~---~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd 1244 (1332)
.....+.. .+..|+||+++++++.||++|...++|.+++++|. .++++.. .. |.+|++ +.++.||+++
T Consensus 175 ~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~------d~~G~l~va~ 246 (322)
T 2fp8_A 175 KETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKR------NADGHFWVSS 246 (322)
T ss_dssp TEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEE------CTTSCEEEEE
T ss_pred CEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEE------CCCCCEEEEe
Confidence 66555443 57899999999999999999999999999999873 3444444 33 999999 5567899999
Q ss_pred CC----------CCEEEEEEec
Q psy5806 1245 WE----------AMSVVIAREK 1256 (1332)
Q Consensus 1245 ~~----------~~~V~~~~~~ 1256 (1332)
+. .+.|.++++.
T Consensus 247 ~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 247 SEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp EEETTSSTTSCEEEEEEEECTT
T ss_pred cCcccccccCCCccEEEEECCC
Confidence 87 5789999874
No 47
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.49 E-value=3.2e-12 Score=145.06 Aligned_cols=195 Identities=11% Similarity=0.101 Sum_probs=150.7
Q ss_pred cceEEEEEeCCCcEEEEEeCC-CCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceE
Q psy5806 1045 MSSIFFDYHYSKNLIYFADMR-SGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHK 1123 (1332)
Q Consensus 1045 ~~~~~id~d~~~~~lY~sd~~-~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~ 1123 (1332)
..|.+++++..+++||+++.. .+.|++++.+ |.....+.......|.+||+|.. ++||+++...++|.+++.+|+..
T Consensus 77 ~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~g~~~ 154 (286)
T 1q7f_A 77 LYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-GQFVRKFGATILQHPRGVTVDNK-GRIIVVECKVMRVIIFDQNGNVL 154 (286)
T ss_dssp SSEEEEEEETTTTEEEEEECGGGCEEEEECTT-SCEEEEECTTTCSCEEEEEECTT-SCEEEEETTTTEEEEECTTSCEE
T ss_pred cCceEEEEEcCCCeEEEEcCCCCCEEEEECCC-CcEEEEecCccCCCceEEEEeCC-CCEEEEECCCCEEEEEcCCCCEE
Confidence 457899997777899999964 7889999844 54443333234468999999974 57999999889999999988866
Q ss_pred EEEe--cCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecC-CCCcceEEEecCCCEEEEEEcC
Q psy5806 1124 KILV--NDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEED-LAFPNELAIDFKQRRLFWADST 1200 (1332)
Q Consensus 1124 ~~~~--~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~-l~~p~glaiD~~~~~LY~~d~~ 1200 (1332)
..+. ..+..|++|+++| .|.||+++... .+|.+.+.+|.....+...+ +..|.+|++|++ ++||+++..
T Consensus 155 ~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~-G~l~v~~~~ 226 (286)
T 1q7f_A 155 HKFGCSKHLEFPNGVVVND-KQEIFISDNRA------HCVKVFNYEGQYLRQIGGEGITNYPIGVGINSN-GEILIADNH 226 (286)
T ss_dssp EEEECTTTCSSEEEEEECS-SSEEEEEEGGG------TEEEEEETTCCEEEEESCTTTSCSEEEEEECTT-CCEEEEECS
T ss_pred EEeCCCCccCCcEEEEECC-CCCEEEEECCC------CEEEEEcCCCCEEEEEccCCccCCCcEEEECCC-CCEEEEeCC
Confidence 6543 3557899999999 68899999765 78999999887655443322 578999999975 589999988
Q ss_pred CC-eEEEEecCCCceEEEEe---ecccceEEEecCCccccccEEEEEECCCCEEEEEEec
Q psy5806 1201 NK-RIEYCDFFGRSRKIVIS---KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREK 1256 (1332)
Q Consensus 1201 ~~-~I~~~d~dG~~~~~~~~---~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~ 1256 (1332)
.+ +|..++.+|.....+.. ...|.+|++ +.+++||+++. .++|...+..
T Consensus 227 ~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~------~~~g~l~vs~~-~~~v~v~~~~ 279 (286)
T 1q7f_A 227 NNFNLTIFTQDGQLISALESKVKHAQCFDVAL------MDDGSVVLASK-DYRLYIYRYV 279 (286)
T ss_dssp SSCEEEEECTTSCEEEEEEESSCCSCEEEEEE------ETTTEEEEEET-TTEEEEEECS
T ss_pred CCEEEEEECCCCCEEEEEcccCCCCcceeEEE------CCCCcEEEECC-CCeEEEEEcc
Confidence 86 99999998876555544 446899999 34678999985 6888877653
No 48
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.48 E-value=1.8e-12 Score=149.37 Aligned_cols=192 Identities=9% Similarity=-0.003 Sum_probs=142.3
Q ss_pred cceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCc--eEEEEee-CCc
Q psy5806 1045 MSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMH--TINVARS-DGQ 1121 (1332)
Q Consensus 1045 ~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~--~I~v~~l-dG~ 1121 (1332)
..|.++++++. ++|||+|...++|++++.+ +. ...+. ...+.|.|||+|.. ++||+++...+ +|.+++. +|+
T Consensus 32 ~~pegia~~~~-g~lyv~d~~~~~I~~~d~~-g~-~~~~~-~~~~~p~gia~~~d-G~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 32 TFLENLASAPD-GTIFVTNHEVGEIVSITPD-GN-QQIHA-TVEGKVSGLAFTSN-GDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp CCEEEEEECTT-SCEEEEETTTTEEEEECTT-CC-EEEEE-ECSSEEEEEEECTT-SCEEEEEECTTSCEEEEEECTTSC
T ss_pred CCcceEEECCC-CCEEEEeCCCCeEEEECCC-Cc-eEEEE-eCCCCceeEEEcCC-CcEEEEeccCCcceEEEEcCCCCe
Confidence 45789999985 5699999999999999866 43 32333 23457999999965 45999996643 4666664 455
Q ss_pred eEEEEe-cCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEE-E---------ecCCCCcceEEEecC
Q psy5806 1122 HKKILV-NDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVL-V---------EEDLAFPNELAIDFK 1190 (1332)
Q Consensus 1122 ~~~~~~-~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l-~---------~~~l~~p~glaiD~~ 1190 (1332)
...+.. .....|.++++.+ .+.+|+++... ++|++++.++....+. . ...+..|+|| +++
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~------g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~d 177 (306)
T 2p4o_A 107 VETLLTLPDAIFLNGITPLS-DTQYLTADSYR------GAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRF 177 (306)
T ss_dssp EEEEEECTTCSCEEEEEESS-SSEEEEEETTT------TEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEE
T ss_pred EEEEEeCCCccccCcccccC-CCcEEEEECCC------CeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcC
Confidence 443322 3445689999876 78899999755 6899999876432221 1 1245679998 666
Q ss_pred CCEEEEEEcCCCeEEEEecCC--C--ceEEEEeecccceEEEecCCccccccEEEEEECCCCEEEEEEec
Q psy5806 1191 QRRLFWADSTNKRIEYCDFFG--R--SRKIVISKVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREK 1256 (1332)
Q Consensus 1191 ~~~LY~~d~~~~~I~~~d~dG--~--~~~~~~~~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~ 1256 (1332)
++.||++|..+++|.++++++ . .++++.....|.+|++ +.+++||++++.+++|.++++.
T Consensus 178 g~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~v------d~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 178 GNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAF------DVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp TTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEE------BTTCCEEEECBTTCCEEEECTT
T ss_pred CCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEE------CCCCCEEEEeCCCCeEEEECCC
Confidence 889999999999999999985 2 2444444678999999 4577899999999999999975
No 49
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.47 E-value=3.3e-11 Score=140.16 Aligned_cols=252 Identities=13% Similarity=0.079 Sum_probs=171.6
Q ss_pred CCccceeEecCCCeEEEEeCCCCeEEEEeCC-CCceEEEEecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecC
Q psy5806 782 NRTESIAVDAIGRKIYWTDMNAQTIMVSDID-GKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMD 860 (1332)
Q Consensus 782 ~~p~glAvD~~~~nLYwtD~~~~~I~v~~ld-G~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~d 860 (1332)
..|.+|++| +++||++....++|.+.++. ++....+ .....|++|++++. |+||+++... .+|.+.+..
T Consensus 44 ~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i--~~~~~p~~i~~~~~-g~lyv~~~~~-----~~v~~iD~~ 113 (328)
T 3dsm_A 44 DVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRI--TGFTSPRYIHFLSD-EKAYVTQIWD-----YRIFIINPK 113 (328)
T ss_dssp SCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEE--ECCSSEEEEEEEET-TEEEEEEBSC-----SEEEEEETT
T ss_pred ccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEc--CCCCCCcEEEEeCC-CeEEEEECCC-----CeEEEEECC
Confidence 357889986 68899999988999999986 5544444 34578999999877 6999998432 368777665
Q ss_pred CCCcEEEecccc------cCceeEEeCCCCCeEEEEeCC-CCeEEEEccCCCceeEEeccCCcceEEEEeC-CEEEEEeC
Q psy5806 861 GTNRAVFETEVI------WPSCLAIDYSDNPKLYWVDTS-KHTIEYKTLATGRAKRAYAVQSHPYTLTVLD-YYVYWTDV 932 (1332)
Q Consensus 861 G~~~~~l~~~l~------~P~gl~iD~~~~~~lYw~d~~-~~~I~~~~~dG~~~~~l~~~~~~P~~la~~~-~~iywtD~ 932 (1332)
.......+.... .|.+|+++ + ++||+++.+ .+.|..+|+..............|.++++.. +.+|.+..
T Consensus 114 t~~~~~~i~~g~~~~~~~~p~~i~~~--~-~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 114 TYEITGYIECPDMDMESGSTEQMVQY--G-KYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITD 190 (328)
T ss_dssp TTEEEEEEECTTCCTTTCBCCCEEEE--T-TEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBC
T ss_pred CCeEEEEEEcCCccccCCCcceEEEE--C-CEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEEC
Confidence 332221122222 89999994 5 799999974 7899999987544333333456788888773 56666654
Q ss_pred CC----------CEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEcc
Q psy5806 933 QH----------SKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSA 1002 (1332)
Q Consensus 933 ~~----------~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~ 1002 (1332)
.. ++|++++..+
T Consensus 191 ~~~~~~~~~~~~~~v~~id~~t---------------------------------------------------------- 212 (328)
T 3dsm_A 191 GGYEGSPYGYEAPSLYRIDAET---------------------------------------------------------- 212 (328)
T ss_dssp CBCTTCSSCBCCCEEEEEETTT----------------------------------------------------------
T ss_pred CCccCCccccCCceEEEEECCC----------------------------------------------------------
Confidence 32 2222211100
Q ss_pred CCccccccCcceEEEEeecceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCce-
Q psy5806 1003 DRRSCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIK- 1081 (1332)
Q Consensus 1003 d~~tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~- 1081 (1332)
.+++..+. ++....|.+|++++.+++||+++. .|+++++.++.-..
T Consensus 213 ------------------~~v~~~~~------------~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~ 259 (328)
T 3dsm_A 213 ------------------FTVEKQFK------------FKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVR 259 (328)
T ss_dssp ------------------TEEEEEEE------------CCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSS
T ss_pred ------------------CeEEEEEe------------cCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeee
Confidence 01011121 111235789999999999999985 89999987544321
Q ss_pred eEeecCCCCceeeEEEecCCeEEEEc----CCCceEEEEeeCCceEEEEecCCCCceEEEE
Q psy5806 1082 PIPLMNDTIRDNFVIDWVANNIYYID----SQMHTINVARSDGQHKKILVNDLMEPLAIAV 1138 (1332)
Q Consensus 1082 ~i~~~~~~~p~glAvDw~~~~LY~td----~~~~~I~v~~ldG~~~~~~~~~~~~P~~iav 1138 (1332)
.++..+...|.|||+|+.+++||+++ ...+.|.+++.+|+....+..+ ..|.+|+.
T Consensus 260 ~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~~G-~~P~~~~~ 319 (328)
T 3dsm_A 260 PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFYVG-IIPGAFCW 319 (328)
T ss_dssp CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEEEEE-ESEEEEEE
T ss_pred eeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEEEec-cCcceEEE
Confidence 12222246899999998899999999 7788999999998877766545 57888886
No 50
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.47 E-value=2.9e-10 Score=132.36 Aligned_cols=280 Identities=10% Similarity=0.024 Sum_probs=194.6
Q ss_pred cccCceeEEeCCCCCeEEEEeCC------CCeEEEEccCCCceeEEeccCCcceEEEEe--CCEEEEEeCCCCEEEEEEC
Q psy5806 871 VIWPSCLAIDYSDNPKLYWVDTS------KHTIEYKTLATGRAKRAYAVQSHPYTLTVL--DYYVYWTDVQHSKIYRANK 942 (1332)
Q Consensus 871 l~~P~gl~iD~~~~~~lYw~d~~------~~~I~~~~~dG~~~~~l~~~~~~P~~la~~--~~~iywtD~~~~~i~~~~~ 942 (1332)
...|.+++++.++ ++||++... .+.|...+...............|.++++. ++++|+++...+.|...+.
T Consensus 40 ~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 40 GKGAYEMAYSQQE-NALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp ESSEEEEEEETTT-TEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCccceEECCCC-CEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 4457899999999 999999976 568999988755443333334557777776 4679999888888776554
Q ss_pred CCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEEeecc
Q psy5806 943 YDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFG 1022 (1332)
Q Consensus 943 ~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~ 1022 (1332)
.+++.+.
T Consensus 119 ~~~~~~~------------------------------------------------------------------------- 125 (353)
T 3vgz_A 119 KTGEVKG------------------------------------------------------------------------- 125 (353)
T ss_dssp TTCCEEE-------------------------------------------------------------------------
T ss_pred CCCeeEE-------------------------------------------------------------------------
Confidence 4332111
Q ss_pred eEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeC-CCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCC
Q psy5806 1023 VIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADM-RSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVAN 1101 (1332)
Q Consensus 1023 ~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~-~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~ 1101 (1332)
.+.+........ .....+.++++++.+++||+++. ..+.|+.+++.++.....+ ......|.++++++.++
T Consensus 126 ---~~~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 126 ---RLVLDDRKRTEE----VRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI-QNTGKMSTGLALDSEGK 197 (353)
T ss_dssp ---EEESCCCCCCSS----CCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE-CCCCTTCCCCEEETTTT
T ss_pred ---EEecCCCccccc----cCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe-cCCCCccceEEECCCCC
Confidence 111100000000 00113678899999999999984 4678999997743322222 11234699999999999
Q ss_pred eEEEEcCCCceEEEEeeCC-ceEEEEec----CCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEe
Q psy5806 1102 NIYYIDSQMHTINVARSDG-QHKKILVN----DLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVE 1176 (1332)
Q Consensus 1102 ~LY~td~~~~~I~v~~ldG-~~~~~~~~----~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~ 1176 (1332)
.||+++. .+.|.++++.. +....+.. ....|.+|+++|..++||+++.+. +.|...++........+.
T Consensus 198 ~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 198 RLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA------AEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp EEEEECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS------SEEEEEETTTCCEEEEEE
T ss_pred EEEEEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC------CEEEEEECCCCcEEEEEE
Confidence 9999987 56888888864 33333332 234578899999888999998765 689999996655444444
Q ss_pred cCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECC
Q psy5806 1177 EDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWE 1246 (1332)
Q Consensus 1177 ~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~ 1246 (1332)
+..|.++++++++++||+++...+.|..+|.........+. ...|.++++ ++.+.+||++...
T Consensus 271 --~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~-----s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 271 --APESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLAL-----SADGKTLYVSVKQ 334 (353)
T ss_dssp --CSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEE-----CTTSCEEEEEEEC
T ss_pred --cCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEE-----cCCCCEEEEEEcc
Confidence 45678999999999999999989999999997554443444 778999999 4567789999864
No 51
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.44 E-value=7.8e-12 Score=143.77 Aligned_cols=199 Identities=16% Similarity=0.180 Sum_probs=149.2
Q ss_pred CccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCce
Q psy5806 1043 EYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQH 1122 (1332)
Q Consensus 1043 ~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~ 1122 (1332)
+...+.++.|++.++.|||++...+.|++++.+ |. . ..+......|.+|++|+. ++||+++...++|.+++.+|+.
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~-~~~~~~~~~~~gl~~d~d-G~l~v~~~~~~~v~~~~~~g~~ 118 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-V-DVLLDATAFTNGNAVDAQ-QRLVHCEHGRRAITRSDADGQA 118 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-E-EEEEESCSCEEEEEECTT-SCEEEEETTTTEEEEECTTSCE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-E-EEEeCCCCccceeeECCC-CCEEEEECCCCEEEEECCCCCE
Confidence 445578999999999999999999999999864 43 2 333345568999999975 5699999888899999998875
Q ss_pred EEEEe--c--CCCCceEEEEcCCCcEEEEEecC--CCC---------CCCCCcEEEEecCCCceEEEEecCCCCcceEEE
Q psy5806 1123 KKILV--N--DLMEPLAIAVYPRRGLLFYSHWG--LYD---------NSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAI 1187 (1332)
Q Consensus 1123 ~~~~~--~--~~~~P~~iavdp~~g~Lywtd~~--~~~---------~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glai 1187 (1332)
..... . .+..|++|+++| .|.||+||.. ... ......|++++.++...+.+. .+..|+||++
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~ 195 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAF 195 (305)
T ss_dssp EEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEE
T ss_pred EEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEE
Confidence 44421 1 245789999999 7899998741 100 012357999998544444443 6789999999
Q ss_pred ecCCCEEEEEEcCC-----CeEEEEecCCCc---eEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEec
Q psy5806 1188 DFKQRRLFWADSTN-----KRIEYCDFFGRS---RKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREK 1256 (1332)
Q Consensus 1188 D~~~~~LY~~d~~~-----~~I~~~d~dG~~---~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~ 1256 (1332)
+++++.||+++... ++|.++++++.. ++++.. ...|.||++ +.+++||++.. +.|+++++.
T Consensus 196 spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~------d~~G~lwv~~~--~gv~~~~~~ 266 (305)
T 3dr2_A 196 SPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCV------DRGGWLWSSSG--TGVCVFDSD 266 (305)
T ss_dssp CTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEE------CTTSCEEECCS--SEEEEECTT
T ss_pred cCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEE------CCCCCEEEecC--CcEEEECCC
Confidence 99999999999874 799999998642 334443 567999999 56778998883 569999874
No 52
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.44 E-value=1.6e-11 Score=140.17 Aligned_cols=213 Identities=15% Similarity=0.165 Sum_probs=157.8
Q ss_pred CccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEee-CCc
Q psy5806 1043 EYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARS-DGQ 1121 (1332)
Q Consensus 1043 ~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~l-dG~ 1121 (1332)
+...+.+++|++.++.|||++...+.|++++.+++ ... +......|.+|++|. .++||+++...+.|.+++. +|+
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~-~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSP-EMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEE-EESSCSSEEEEEECT-TCCEEEEETTTTEEEEECSTTCC
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEE-EECCCCCcceeeECC-CCcEEEEecCCCeEEEEcCCCCc
Confidence 45568899999999999999999999999997733 333 334556899999996 5669999988889999998 676
Q ss_pred eEEEEe--c--CCCCceEEEEcCCCcEEEEEecC--CC---------CCCCCCcEEEEecCCCceEEEEecCCCCcceEE
Q psy5806 1122 HKKILV--N--DLMEPLAIAVYPRRGLLFYSHWG--LY---------DNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELA 1186 (1332)
Q Consensus 1122 ~~~~~~--~--~~~~P~~iavdp~~g~Lywtd~~--~~---------~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~gla 1186 (1332)
....+. . ....|++|+++| .|.||+|+.. .. .+.....|++++.+|.. .. +...+..|+||+
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~-~~-~~~~~~~~~gi~ 178 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTL-SA-PIRDRVKPNGLA 178 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCE-EE-EECCCSSEEEEE
T ss_pred EEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCCCCE-EE-eecCCCCCccEE
Confidence 554421 1 245789999999 7899998741 10 00113589999988543 33 344678899999
Q ss_pred EecCCCEEEEEEcCCCeEEEEecC--CCc---eEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCC
Q psy5806 1187 IDFKQRRLFWADSTNKRIEYCDFF--GRS---RKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDT 1259 (1332)
Q Consensus 1187 iD~~~~~LY~~d~~~~~I~~~d~d--G~~---~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~ 1259 (1332)
++++++.| |++...++|.+++++ |.- ++++ . ...|.+|++ +.+++||++. .+.|.++++. |
T Consensus 179 ~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~------d~~G~l~v~~--~~~v~~~~~~-g- 246 (296)
T 3e5z_A 179 FLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRV------DAGGLIWASA--GDGVHVLTPD-G- 246 (296)
T ss_dssp ECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEE------BTTSCEEEEE--TTEEEEECTT-S-
T ss_pred ECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEE------CCCCCEEEEc--CCeEEEECCC-C-
Confidence 99998888 999999999999985 433 3444 4 678999999 5578899999 7899999986 4
Q ss_pred CcceEEEEecCCCCeeeE
Q psy5806 1260 GQWDVHLIRSNQEDFLNI 1277 (1332)
Q Consensus 1260 ~~~~~~~~~~~~~~~~~i 1277 (1332)
.....+..... +..+
T Consensus 247 --~~~~~~~~~~~-~~~~ 261 (296)
T 3e5z_A 247 --DELGRVLTPQT-TSNL 261 (296)
T ss_dssp --CEEEEEECSSC-CCEE
T ss_pred --CEEEEEECCCC-ceeE
Confidence 34444444333 5444
No 53
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.43 E-value=6.7e-12 Score=145.53 Aligned_cols=196 Identities=15% Similarity=0.133 Sum_probs=144.8
Q ss_pred cceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeec----CCCCceeeEEEecCCeEEEEcCCC----------
Q psy5806 1045 MSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLM----NDTIRDNFVIDWVANNIYYIDSQM---------- 1110 (1332)
Q Consensus 1045 ~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~----~~~~p~glAvDw~~~~LY~td~~~---------- 1110 (1332)
..|.+|++++.+++||++|... .|.+++.+ +...+++... ....|.+|++|...++||++|...
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~~-~i~~~d~~-~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCYY-HLSVVGSE-GGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETTT-EEEEECTT-CEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred CCCceEEEcCCCCcEEEEECCC-CEEEEeCC-CCEEEEecccCCCCcccccceEEEecCCCEEEEECCccccccccccee
Confidence 3578999998678999999664 48888865 2223333321 234699999996467999998652
Q ss_pred -------ceEEEEeeCCceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCC---ceEEEEecCCC
Q psy5806 1111 -------HTINVARSDGQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGS---YRTVLVEEDLA 1180 (1332)
Q Consensus 1111 -------~~I~v~~ldG~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~---~~~~l~~~~l~ 1180 (1332)
++|.+++.++.....+..++..|.+|+++|....||+++.+. .+|++++++|. ..+.+.. ...
T Consensus 158 ~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~------~~I~~~~~~~~~~~~~~~~~~-~~g 230 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLS------HQIVKYWLEGPKKGTAEVLVK-IPN 230 (322)
T ss_dssp HHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGG------TEEEEEESSSTTTTCEEEEEE-CSS
T ss_pred hcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCC------CeEEEEECCCCcCCccceEEe-CCC
Confidence 568778777555555555678899999999777899999876 78999999873 3334433 223
Q ss_pred CcceEEEecCCCEEEEEEcC----------CCeEEEEecCCCceEEEEe-----ecccceEEEecCCccccccEEEEEEC
Q psy5806 1181 FPNELAIDFKQRRLFWADST----------NKRIEYCDFFGRSRKIVIS-----KVAPYGLSVRQSPGKAFIVELYWTDW 1245 (1332)
Q Consensus 1181 ~p~glaiD~~~~~LY~~d~~----------~~~I~~~d~dG~~~~~~~~-----~~~P~glav~~~~~~~~~~~lYwtd~ 1245 (1332)
|.||++|.++ +||+++.. .++|.++|.+|...+.+.. ...|.+++. .+++||+++.
T Consensus 231 -P~gi~~d~~G-~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~-------~~g~L~v~~~ 301 (322)
T 2fp8_A 231 -PGNIKRNADG-HFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQE-------HDGLLYIGTL 301 (322)
T ss_dssp -EEEEEECTTS-CEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEE-------ETTEEEEECS
T ss_pred -CCCeEECCCC-CEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEE-------eCCEEEEeec
Confidence 9999999764 69999876 5789999999876554443 256888888 7899999999
Q ss_pred CCCEEEEEEecCC
Q psy5806 1246 EAMSVVIAREKSD 1258 (1332)
Q Consensus 1246 ~~~~V~~~~~~~g 1258 (1332)
..+.|.++++...
T Consensus 302 ~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 302 FHGSVGILVYDKK 314 (322)
T ss_dssp SCSEEEEEEC---
T ss_pred CCCceEEEecccc
Confidence 9999999997643
No 54
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.40 E-value=2.6e-09 Score=124.20 Aligned_cols=279 Identities=16% Similarity=0.152 Sum_probs=194.6
Q ss_pred cceEEEEEEccCCeEEEEcCC------CceEEEEEecCcceEEEEeCCCCCCccEEEeccCCeEEEEeCCCCeEEEEeCC
Q psy5806 467 KSVVAIAWESANDSLYWADVE------NGEINRAHINGTFQYNVIRHNTKKPAGVAIDWRTNKLYWTESEYNWIEVSNLD 540 (1332)
Q Consensus 467 ~~~~~i~~d~~~~~lywsD~~------~~~I~r~~~~g~~~~~v~~~~~~~p~glAvDw~~~~lYw~d~~~~~I~v~~l~ 540 (1332)
..+.+++|++..++||+++.. .+.|+.+++........+.. -..|.++++++.++.||+++...+.|.+.++.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 457789999988999999865 66888887765443333332 24699999999999999999988999999986
Q ss_pred CCCc-EEEEeCCCC--------CceEEEEecCCCeEEEEecCCCCceEEEcCCCCceEEEEeCCCCCceeeEEeccCCeE
Q psy5806 541 GTYP-TLLFWQNLS--------EPRDIAVNPIGGIMYWCSWGDLHKIEMAGMDGSHRHILASDSLKNPTGLAIDLENSRL 611 (1332)
Q Consensus 541 g~~~-~~l~~~~~~--------~P~~iavdp~~G~lywtd~g~~~~I~r~~~dG~~~~~l~~~~l~~p~glaiD~~~~rL 611 (1332)
+... ..+...... .|++++++|..++||.++++...+|...+++.......+...-..|.++++++.+++|
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRL 199 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEE
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEE
Confidence 5433 333322111 3899999999999999998767789888887655544444233569999999999999
Q ss_pred EEEeCCCCeEEEEecCCCceEEEEeecceEEEeeecCceeEEEEeCCCCcCcCCCcCCCCCCccccccCCCCCceeeCCC
Q psy5806 612 YWANVGLKTIEFTNLDGTRKQTLIALHHLKVMTKVVGLTDIDIFHRRRSKKTHPCNENNGGCSHLCLIAPKDGIRCVCPA 691 (1332)
Q Consensus 612 Yw~d~~~~~I~~~~~dG~~~~~~~~~~~l~v~~~~~~~~~i~v~~~~~q~~~~pC~~~nggCs~lCl~~~~~~~~C~Cp~ 691 (1332)
|.++. .+.|..+++......
T Consensus 200 ~~~~~-~~~i~~~d~~~~~~~----------------------------------------------------------- 219 (353)
T 3vgz_A 200 YTTNA-DGELITIDTADNKIL----------------------------------------------------------- 219 (353)
T ss_dssp EEECT-TSEEEEEETTTTEEE-----------------------------------------------------------
T ss_pred EEEcC-CCeEEEEECCCCeEE-----------------------------------------------------------
Confidence 98875 345544443221100
Q ss_pred CccccCCCCccccCCccceEeeccceeEEEecCCCCCcceeeecccccceeEEeecCCCceEEEEecCCCceEEEecCCC
Q psy5806 692 GNLLREDRRTCSENPSKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMVASVDVDTKNEYIYWSDISEKTIERVRFDMT 771 (1332)
Q Consensus 692 g~~l~~d~~tC~~~~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~ 771 (1332)
..+.+.... ....+.++++++.++++|+++...+.|..+++...
T Consensus 220 ---------------------------~~~~~~~~~---------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 220 ---------------------------SRKKLLDDG---------KEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG 263 (353)
T ss_dssp ---------------------------EEEECCCSS---------SCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC
T ss_pred ---------------------------EEEEcCCCC---------CCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 000000000 01124567788888889999888888998887544
Q ss_pred CceEEEeCCCCCccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEecCCCCCeEEEEeCCCCeEEEEecc
Q psy5806 772 GRERLVVNDLNRTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWS 845 (1332)
Q Consensus 772 ~~~~vi~~~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g 845 (1332)
.....+. ...+.+++++..++.||+++...+.|.+.++........+.. ...|.+++++|...+||++...
T Consensus 264 ~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 264 NILAKVA--APESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT-PTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp CEEEEEE--CSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC-CSEEEEEEECTTSCEEEEEEEC
T ss_pred cEEEEEE--cCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec-CCCCCeEEEcCCCCEEEEEEcc
Confidence 4333333 345789999999999999999899999999864333222322 2479999999997789998754
No 55
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.40 E-value=1.6e-11 Score=144.23 Aligned_cols=203 Identities=16% Similarity=0.179 Sum_probs=145.5
Q ss_pred CCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEe-----ecCCCCceeeEEEec---CCeEEEEcCCC---
Q psy5806 1042 PEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIP-----LMNDTIRDNFVIDWV---ANNIYYIDSQM--- 1110 (1332)
Q Consensus 1042 ~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~-----~~~~~~p~glAvDw~---~~~LY~td~~~--- 1110 (1332)
.++..|.+|++++.+ +||+++.. ++|++++ + ++. +.+. ..+...|.|||+++. ++.||+++...
T Consensus 28 ~~l~~P~~ia~~pdG-~l~V~e~~-g~I~~i~-~-g~~-~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~ 102 (352)
T 2ism_A 28 GGLEVPWALAFLPDG-GMLIAERP-GRIRLFR-E-GRL-STYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGG 102 (352)
T ss_dssp CCCSCEEEEEECTTS-CEEEEETT-TEEEEEE-T-TEE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTS
T ss_pred CCCCCceEEEEcCCC-eEEEEeCC-CeEEEEE-C-CCc-cEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCC
Confidence 456789999999876 59999965 9999998 4 542 2221 234568999999987 78999998753
Q ss_pred --ceEEEEeeCCc---eEEEEec-------CCCCceEEEEcCCCcEEEEEecCCCC-------CCCCCcEEEEecCCCc-
Q psy5806 1111 --HTINVARSDGQ---HKKILVN-------DLMEPLAIAVYPRRGLLFYSHWGLYD-------NSPTTKIEKVYLDGSY- 1170 (1332)
Q Consensus 1111 --~~I~v~~ldG~---~~~~~~~-------~~~~P~~iavdp~~g~Lywtd~~~~~-------~~~~~~I~r~~ldG~~- 1170 (1332)
++|.++++++. ..+++.. ....|.+|+++| .|+||+++..... ....++|.|++.+|+.
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p 181 (352)
T 2ism_A 103 LRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPA 181 (352)
T ss_dssp SEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBC
T ss_pred CccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCC
Confidence 78888888753 2222211 234689999999 7899999732200 1234689999999831
Q ss_pred -----------eEEEEecCCCCcceEEEecCCCEEEEEEcCCCe--------EEEEecCCCc---------------eEE
Q psy5806 1171 -----------RTVLVEEDLAFPNELAIDFKQRRLFWADSTNKR--------IEYCDFFGRS---------------RKI 1216 (1332)
Q Consensus 1171 -----------~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~--------I~~~d~dG~~---------------~~~ 1216 (1332)
...++..++..|.||++|+++++||++|...+. |..+.. |.+ ...
T Consensus 182 ~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~-G~nyGwp~~~g~~~~~~~~~p 260 (352)
T 2ism_A 182 PGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVP-GGNYGWPRVVGRGNDPRYRDP 260 (352)
T ss_dssp TTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECT-TCBCCTTTCCSCCCCTTSCCC
T ss_pred CCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEecc-CCcCCCCcccCCCCCCCCcCC
Confidence 223445578889999999988999999998776 555543 321 011
Q ss_pred EE--e-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1217 VI--S-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1217 ~~--~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
+. . ...|.||++ +++.||++++..++|.+++..+.
T Consensus 261 ~~~~~~~~ap~G~~~-------~~G~l~v~~~~~~~v~~v~~~~~ 298 (352)
T 2ism_A 261 LYFWPQGFPPGNLAF-------FRGDLYVAGLRGQALLRLVLEGE 298 (352)
T ss_dssp SEECTTCCCEEEEEE-------ETTEEEEEETTTTEEEEEEEEEE
T ss_pred eEecCCCCCCcceEE-------ECCEEEEEECCCCEEEEEEECCC
Confidence 11 2 457999999 99999999999999999998754
No 56
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.35 E-value=2.5e-09 Score=123.56 Aligned_cols=310 Identities=13% Similarity=0.118 Sum_probs=197.7
Q ss_pred CceEEEEecCCCceEEEecCCCCc-eEE-EeCCCCCccceeEecCCCeEEEEeCCCCeEEEEeCC---CCceEEEEecCC
Q psy5806 750 NEYIYWSDISEKTIERVRFDMTGR-ERL-VVNDLNRTESIAVDAIGRKIYWTDMNAQTIMVSDID---GKNAKVLFWLNL 824 (1332)
Q Consensus 750 ~~~lYwsD~~~~~I~r~~~~g~~~-~~v-i~~~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ld---G~~~~~l~~~~~ 824 (1332)
.+.+|+++...+.|+..+++.+.. +.+ .......|.++++++.++.||+++...+.|.+.+++ |+.+.+......
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 457888888888888888764332 222 122346799999999999999999887899998876 333322211222
Q ss_pred CCCeEEEEeCCCCeEEEEecccCcCCCCceEEEec-CCCCcEEEe--cccccCceeEEeCCCCCeEEEEeCCCCeEEEEc
Q psy5806 825 YRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHM-DGTNRAVFE--TEVIWPSCLAIDYSDNPKLYWVDTSKHTIEYKT 901 (1332)
Q Consensus 825 ~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~-dG~~~~~l~--~~l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~ 901 (1332)
..|.+|+++|...+||++..... .|....+ +|.....+. .....|.+++++..+ +.||+++...+.|...+
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~~~~-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d 157 (343)
T 1ri6_A 84 GSLTHISTDHQGQFVFVGSYNAG-----NVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDN-RTLWVPALKQDRICLFT 157 (343)
T ss_dssp SCCSEEEECTTSSEEEEEETTTT-----EEEEEEEETTEEEEEEEEECCCTTBCCCEECTTS-SEEEEEEGGGTEEEEEE
T ss_pred CCCcEEEEcCCCCEEEEEecCCC-----eEEEEECCCCccccccccccCCCCceEEEECCCC-CEEEEecCCCCEEEEEE
Confidence 47999999999778999886433 5776666 343222222 225568899999999 89999987778898888
Q ss_pred cCC-CceeEEe------ccCCcceEEEEe--CCEEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcc
Q psy5806 902 LAT-GRAKRAY------AVQSHPYTLTVL--DYYVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNAC 972 (1332)
Q Consensus 902 ~dG-~~~~~l~------~~~~~P~~la~~--~~~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C 972 (1332)
++. .....+. .....|.++++. +.+||.++...+.|...+.. .. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~--------------------~~-~----- 211 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK--------------------DP-H----- 211 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS--------------------CT-T-----
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec--------------------CC-C-----
Confidence 865 3222211 123467777775 44677777666665532210 00 0
Q ss_pred cCCCCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEEeecceEEEEeCCCCCCCCcccccCCccceEEEEE
Q psy5806 973 GSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDY 1052 (1332)
Q Consensus 973 ~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~ 1052 (1332)
| .+.. +..+...+.. ..+...+.+++|
T Consensus 212 ------------------------g---------------~~~~-------~~~~~~~~~~-------~~~~~~~~~i~~ 238 (343)
T 1ri6_A 212 ------------------------G---------------NIEC-------VQTLDMMPEN-------FSDTRWAADIHI 238 (343)
T ss_dssp ------------------------S---------------CCEE-------EEEEECSCTT-------CCSCCCEEEEEE
T ss_pred ------------------------C---------------cEEE-------EeeccccCcc-------ccccCCccceEE
Confidence 0 0000 0011100000 112335678999
Q ss_pred eCCCcEEEEEeCCCCeEEEEECCCCCCc-eeE-eecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC---CceEEE--
Q psy5806 1053 HYSKNLIYFADMRSGNLRTFDMSDSTRI-KPI-PLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD---GQHKKI-- 1125 (1332)
Q Consensus 1053 d~~~~~lY~sd~~~~~I~~~~l~~g~~~-~~i-~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld---G~~~~~-- 1125 (1332)
++.++.||+++...+.|..++++..++. +.+ .......|.++++++.++.||+++...+.|.+++++ |+...+
T Consensus 239 s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~ 318 (343)
T 1ri6_A 239 TPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGR 318 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEE
T ss_pred CCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccc
Confidence 9999999999988899999887632221 222 112234599999999999999999888899998776 333333
Q ss_pred EecCCCCceEEEEcCCCcEE
Q psy5806 1126 LVNDLMEPLAIAVYPRRGLL 1145 (1332)
Q Consensus 1126 ~~~~~~~P~~iavdp~~g~L 1145 (1332)
+..+ ..|.+|+++|..+.+
T Consensus 319 ~~~g-~~p~~i~~~~~~~~~ 337 (343)
T 1ri6_A 319 YAVG-QGPMWVVVNAHEGGS 337 (343)
T ss_dssp EECS-SSCCEEEEEEEC---
T ss_pred cccC-CCCeeEEEEcccCCc
Confidence 3333 689999999865543
No 57
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.34 E-value=3.7e-10 Score=124.75 Aligned_cols=205 Identities=11% Similarity=0.053 Sum_probs=149.5
Q ss_pred ccCCc-cceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEee
Q psy5806 1040 PFPEY-MSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARS 1118 (1332)
Q Consensus 1040 pi~~~-~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~l 1118 (1332)
|++++ .++.||+|++.+++||.+.-..+.|+++++. |.-...+...+...++|||++ -.+.+|+++...+++.++++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~-~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYI-GDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEEC-STTEEEEEETTTTEEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEe-CCCEEEEEECCCCcEEEEEc
Confidence 56665 5789999999999999876678999999987 665555544566799999999 45667788888889998887
Q ss_pred CCce--EEE--EecCC-CCc-----eEEEEcCCCcEEEEEecCCCCCCCCCcEEEEe--cCCCceEEEEe------cCCC
Q psy5806 1119 DGQH--KKI--LVNDL-MEP-----LAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVY--LDGSYRTVLVE------EDLA 1180 (1332)
Q Consensus 1119 dG~~--~~~--~~~~~-~~P-----~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~--ldG~~~~~l~~------~~l~ 1180 (1332)
+... ..+ +.-.+ ..| -|||+||..++||.+.... ...|++.+ +.+...+++-. ..+.
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-----p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~ 173 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-----PIEVYKVNGLLSSNELHISKDKALQRQFTLD 173 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS-----SEEEEEEESTTCSSCCEEEECHHHHHTCCSS
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC-----CceEEEEcccccCCceeeecchhhccccccC
Confidence 6332 212 21121 234 8999999988999987654 23788887 22222233211 1356
Q ss_pred CcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEE-e---------ecccceEEEecCCccccccEEEEEECCCCEE
Q psy5806 1181 FPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVI-S---------KVAPYGLSVRQSPGKAFIVELYWTDWEAMSV 1250 (1332)
Q Consensus 1181 ~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~-~---------~~~P~glav~~~~~~~~~~~lYwtd~~~~~V 1250 (1332)
.+.+|++|+.+++||+....++.|..+|.+|..+..+. . ...|.|||+ |.+|.||++... +.+
T Consensus 174 d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~------d~~G~lyIvsE~-n~~ 246 (255)
T 3qqz_A 174 DVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAM------DASGNIYIVSEP-NRF 246 (255)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEE------CTTCCEEEEETT-TEE
T ss_pred CceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEE------CCCCCEEEEcCC-ceE
Confidence 78999999999999999999999999999998433332 1 248999999 567789999754 699
Q ss_pred EEEEecCC
Q psy5806 1251 VIAREKSD 1258 (1332)
Q Consensus 1251 ~~~~~~~g 1258 (1332)
+++.|..+
T Consensus 247 y~f~~~~~ 254 (255)
T 3qqz_A 247 YRFTPQSS 254 (255)
T ss_dssp EEEEC---
T ss_pred EEEEecCC
Confidence 99987653
No 58
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.33 E-value=1.7e-10 Score=132.63 Aligned_cols=212 Identities=11% Similarity=0.042 Sum_probs=145.0
Q ss_pred eEEEEe--ecceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCC--eEEEEECCCCCCceeEee-cCC
Q psy5806 1014 FLLYTS--RFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSG--NLRTFDMSDSTRIKPIPL-MND 1088 (1332)
Q Consensus 1014 ~ll~~~--~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~--~I~~~~l~~g~~~~~i~~-~~~ 1088 (1332)
.|+++. ... |.+++.+.. .....+. ...|.+|++++.++ ||+++...+ .|.+++..+|. .+.+.. ...
T Consensus 44 ~lyv~d~~~~~-I~~~d~~g~--~~~~~~~--~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~g~-~~~~~~~~~~ 116 (306)
T 2p4o_A 44 TIFVTNHEVGE-IVSITPDGN--QQIHATV--EGKVSGLAFTSNGD-LVATGWNADSIPVVSLVKSDGT-VETLLTLPDA 116 (306)
T ss_dssp CEEEEETTTTE-EEEECTTCC--EEEEEEC--SSEEEEEEECTTSC-EEEEEECTTSCEEEEEECTTSC-EEEEEECTTC
T ss_pred CEEEEeCCCCe-EEEECCCCc--eEEEEeC--CCCceeEEEcCCCc-EEEEeccCCcceEEEEcCCCCe-EEEEEeCCCc
Confidence 355554 345 777776532 1112222 24688999998765 999996543 58888865443 333332 234
Q ss_pred CCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEE--E---------ecCCCCceEEEEcCCCcEEEEEecCCCCCCC
Q psy5806 1089 TIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKI--L---------VNDLMEPLAIAVYPRRGLLFYSHWGLYDNSP 1157 (1332)
Q Consensus 1089 ~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~--~---------~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~ 1157 (1332)
..|.|+++ |.++++|++|...++|.+++.++...++ . ...+..|.+| +|..++||+++...
T Consensus 117 ~~~~g~~~-~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~----- 188 (306)
T 2p4o_A 117 IFLNGITP-LSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEK----- 188 (306)
T ss_dssp SCEEEEEE-SSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTT-----
T ss_pred cccCcccc-cCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCC-----
Confidence 56889886 5788999999888899888887532111 1 1245679998 67678999999876
Q ss_pred CCcEEEEecCC--C--ceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEE-Ee--ecccceEEEec
Q psy5806 1158 TTKIEKVYLDG--S--YRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIV-IS--KVAPYGLSVRQ 1230 (1332)
Q Consensus 1158 ~~~I~r~~ldG--~--~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~-~~--~~~P~glav~~ 1230 (1332)
++|+++++++ . .+..+.. +..|.||++|.+ ++||+++...++|.+++.+|....+. +. ...|.++++-+
T Consensus 189 -~~I~~~~~~~~g~~~~~~~~~~--~~~P~gi~vd~d-G~l~va~~~~~~V~~~~~~G~~~~~~~~~~~~~~p~~~a~~g 264 (306)
T 2p4o_A 189 -MLLLRIPVDSTDKPGEPEIFVE--QTNIDDFAFDVE-GNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQ 264 (306)
T ss_dssp -TEEEEEEBCTTSCBCCCEEEEE--SCCCSSEEEBTT-CCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECC
T ss_pred -CEEEEEEeCCCCCCCccEEEec--cCCCCCeEECCC-CCEEEEeCCCCeEEEECCCCCEEEEeecccccCCceEEEEec
Confidence 7999999985 2 2333332 468999999976 47999999999999999987643321 22 57899999900
Q ss_pred CCccccccEEEEEECC
Q psy5806 1231 SPGKAFIVELYWTDWE 1246 (1332)
Q Consensus 1231 ~~~~~~~~~lYwtd~~ 1246 (1332)
..+.+++||+++..
T Consensus 265 --~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 265 --TEGDCTAIYVVTNG 278 (306)
T ss_dssp --STTTTTEEEEEECT
T ss_pred --ccCCCCEEEEECCC
Confidence 00346899999974
No 59
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.32 E-value=2.8e-10 Score=133.52 Aligned_cols=253 Identities=14% Similarity=0.075 Sum_probs=163.6
Q ss_pred cEEEEeCCCCCceEEEEecCCCeEEEEecCCCCceEEEcCCCCceEEEE-----eCCCCCceeeEEecc---CCeEEEEe
Q psy5806 544 PTLLFWQNLSEPRDIAVNPIGGIMYWCSWGDLHKIEMAGMDGSHRHILA-----SDSLKNPTGLAIDLE---NSRLYWAN 615 (1332)
Q Consensus 544 ~~~l~~~~~~~P~~iavdp~~G~lywtd~g~~~~I~r~~~dG~~~~~l~-----~~~l~~p~glaiD~~---~~rLYw~d 615 (1332)
+..++..++..|++|+++|. |.||+++.. .+|.+...+|. ..+. ......|.||++++. +++||+++
T Consensus 20 ~~~~va~~l~~P~~ia~~pd-G~l~V~e~~--g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~ 94 (354)
T 3a9g_A 20 KISEVASDLEVPWSIAPLGG-GRYLVTERP--GRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYA 94 (354)
T ss_dssp EEEEEECSCSCEEEEEEEET-TEEEEEETT--TEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred EEEEEeCCCCCCeEEEEcCC-CeEEEEeCC--CEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEE
Confidence 34445578999999999996 899999965 78998877776 3332 234578999999997 89999998
Q ss_pred CC---C----CeEEEEecCCCc-----eEEEEeecceEEEeeecCceeEEEEeCCCCcCcCCCcCCCCCCccccccCCCC
Q psy5806 616 VG---L----KTIEFTNLDGTR-----KQTLIALHHLKVMTKVVGLTDIDIFHRRRSKKTHPCNENNGGCSHLCLIAPKD 683 (1332)
Q Consensus 616 ~~---~----~~I~~~~~dG~~-----~~~~~~~~~l~v~~~~~~~~~i~v~~~~~q~~~~pC~~~nggCs~lCl~~~~~ 683 (1332)
.. . +.|.++++++.. .++++.
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~----------------------------------------------- 127 (354)
T 3a9g_A 95 SYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLID----------------------------------------------- 127 (354)
T ss_dssp EEECGGGCEEEEEEEEEECSSSCCEEEEEEEEE-----------------------------------------------
T ss_pred eccCCCCCcceEEEEEEECCCCcCcCccEEEEE-----------------------------------------------
Confidence 64 2 456666665441 111100
Q ss_pred CceeeCCCCccccCCCCccccCCccceEeeccceeEEEecCCCCCcceeeecccccceeEEeecCCCceEEEEe------
Q psy5806 684 GIRCVCPAGNLLREDRRTCSENPSKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMVASVDVDTKNEYIYWSD------ 757 (1332)
Q Consensus 684 ~~~C~Cp~g~~l~~d~~tC~~~~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~~~id~d~~~~~lYwsD------ 757 (1332)
.+ |......+..|.+++. ++||++.
T Consensus 128 ------------------------------------~~------------~~~~~h~~~~l~~~pD-G~Lyvt~G~~~~~ 158 (354)
T 3a9g_A 128 ------------------------------------GI------------PGAYIHNGGRIRFGPD-GMLYITTGDAADP 158 (354)
T ss_dssp ------------------------------------EE------------ECCSSCCCCCEEECTT-SCEEEECCCTTCG
T ss_pred ------------------------------------cC------------CCCCCcCCceEEECCC-CcEEEEECCCCCC
Confidence 00 0000111122333332 2344432
Q ss_pred -------cCCCceEEEecCCCC-------ceEEEeCCCCCccceeEecCCCeEEEEeCCCCe---EEEEeCCCCc-----
Q psy5806 758 -------ISEKTIERVRFDMTG-------RERLVVNDLNRTESIAVDAIGRKIYWTDMNAQT---IMVSDIDGKN----- 815 (1332)
Q Consensus 758 -------~~~~~I~r~~~~g~~-------~~~vi~~~~~~p~glAvD~~~~nLYwtD~~~~~---I~v~~ldG~~----- 815 (1332)
...++|.|++++|+. ..++...++.+|.||++|..+++||++|...+. |.+....+.+
T Consensus 159 ~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~ 238 (354)
T 3a9g_A 159 RLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLA 238 (354)
T ss_dssp GGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTC
T ss_pred ccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcc
Confidence 124678888888862 234667789999999999978889999987654 5555432210
Q ss_pred ----------eEEEEe-cCCCCCeEEEEeC------CCCeEEEEecccCcCCCCceEEEecCCCCc----EEEecc-ccc
Q psy5806 816 ----------AKVLFW-LNLYRPRSIVVHY------GLGLMVWADWSRTRLTNNRIEMAHMDGTNR----AVFETE-VIW 873 (1332)
Q Consensus 816 ----------~~~l~~-~~~~~P~~Iavdp------~~g~lywtd~g~~~~~~~~I~r~~~dG~~~----~~l~~~-l~~ 873 (1332)
.-+..+ .....|.+|++.. .+|.||++++... +|.+..+++... ..+... ...
T Consensus 239 ~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~-----~v~~~~~~~~g~~~~~~~~~~~~~~r 313 (354)
T 3a9g_A 239 TGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGS-----MLAAVNFGDNMEVRKISTFFKNVFGR 313 (354)
T ss_dssp CSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTT-----EEEEEEECGGGCEEEEEEECTTTSCC
T ss_pred cCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCC-----EEEEEEECCCCcccceeeeccCCCCC
Confidence 111122 2234699999941 5699999998655 899999986432 234333 567
Q ss_pred CceeEEeCCCCCeEEEEeCC-CC---------eEEEEccCC
Q psy5806 874 PSCLAIDYSDNPKLYWVDTS-KH---------TIEYKTLAT 904 (1332)
Q Consensus 874 P~gl~iD~~~~~~lYw~d~~-~~---------~I~~~~~dG 904 (1332)
|.+++++.++ .||+++.. .+ +|+++.+.|
T Consensus 314 p~~v~~~pDG--~lyv~~~~~~G~g~~~~~~g~i~ri~~~g 352 (354)
T 3a9g_A 314 LRDVVIDDDG--GILISTSNRDGRGSLRAGDDKILKIVSEQ 352 (354)
T ss_dssp EEEEEECTTS--CEEEEECTTSSSSCCCTTCSCEEEEEETT
T ss_pred eeEEEECCCC--cEEEEEeCCCCCcCCCCCCCEEEEEecCC
Confidence 9999999876 89999853 33 777776654
No 60
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.32 E-value=1.6e-10 Score=135.57 Aligned_cols=250 Identities=13% Similarity=0.114 Sum_probs=162.8
Q ss_pred EEEeCCCCCCccEEEeccCCeEEEEeCCCCeEEEEeCCCCCcEEE----EeCCCCCceEEEEecC---CCeEEEEecCC-
Q psy5806 503 NVIRHNTKKPAGVAIDWRTNKLYWTESEYNWIEVSNLDGTYPTLL----FWQNLSEPRDIAVNPI---GGIMYWCSWGD- 574 (1332)
Q Consensus 503 ~v~~~~~~~p~glAvDw~~~~lYw~d~~~~~I~v~~l~g~~~~~l----~~~~~~~P~~iavdp~---~G~lywtd~g~- 574 (1332)
+++..++..|.+||++.-+ +||+++.. ++|.+.+ +|+...+. ...++..|.+||++|. +|+||.++...
T Consensus 24 ~~va~~l~~P~~ia~~pdG-~l~V~e~~-g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~ 100 (352)
T 2ism_A 24 EEVVGGLEVPWALAFLPDG-GMLIAERP-GRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAE 100 (352)
T ss_dssp EEEECCCSCEEEEEECTTS-CEEEEETT-TEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECT
T ss_pred EEEECCCCCceEEEEcCCC-eEEEEeCC-CeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCC
Confidence 3445678899999999865 59999876 8999998 77533221 1245678999999998 89999998642
Q ss_pred ---CCceEEEcCCCC---ceEEEEe------CCCCCceeeEEeccCCeEEEEeCCC-------------CeEEEEecCCC
Q psy5806 575 ---LHKIEMAGMDGS---HRHILAS------DSLKNPTGLAIDLENSRLYWANVGL-------------KTIEFTNLDGT 629 (1332)
Q Consensus 575 ---~~~I~r~~~dG~---~~~~l~~------~~l~~p~glaiD~~~~rLYw~d~~~-------------~~I~~~~~dG~ 629 (1332)
..+|.|...++. ..++++. ...+.|++|++++.. +||+++... ++|.+++.||+
T Consensus 101 ~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~ 179 (352)
T 2ism_A 101 GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTGEVYERELAQDLASLGGKILRLTPEGE 179 (352)
T ss_dssp TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECCCTTCGGGGGCTTCSSSEEEEECTTSS
T ss_pred CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEECCCCCCccccCCCCCceEEEEEcCCCC
Confidence 168999988864 3344442 234678999999865 899997532 23333333332
Q ss_pred ceEEEEeecceEEEeeecCceeEEEEeCCCCcCcCCCcCCCCCCccccccCCCCCceeeCCCCccccCCCCccccCCccc
Q psy5806 630 RKQTLIALHHLKVMTKVVGLTDIDIFHRRRSKKTHPCNENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSENPSKF 709 (1332)
Q Consensus 630 ~~~~~~~~~~l~v~~~~~~~~~i~v~~~~~q~~~~pC~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~ 709 (1332)
+ |..| +|
T Consensus 180 ----~--------------------------p~~n-------------------------------------------pf 186 (352)
T 2ism_A 180 ----P--------------------------APGN-------------------------------------------PF 186 (352)
T ss_dssp ----B--------------------------CTTC-------------------------------------------TT
T ss_pred ----C--------------------------CCCC-------------------------------------------cc
Confidence 0 0000 00
Q ss_pred eEeeccceeEEEecCCCCCcceeeecccccceeEEeecCCCceEEEEecCCCc--------eEEEecCCC----------
Q psy5806 710 LLVSQTDKIRQISLDVEYRYPIVLPLRQLKMVASVDVDTKNEYIYWSDISEKT--------IERVRFDMT---------- 771 (1332)
Q Consensus 710 ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~~~id~d~~~~~lYwsD~~~~~--------I~r~~~~g~---------- 771 (1332)
. .. . .....+ . ..++++|.++++|+.++.||++|...+. |.++...+.
T Consensus 187 ~---~~--------~-~~~~~i-~-a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~ 252 (352)
T 2ism_A 187 L---GR--------R-GARPEV-Y-SLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRG 252 (352)
T ss_dssp T---TC--------T-TSCTTE-E-EECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCC
T ss_pred c---CC--------C-CCCccE-E-EEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCC
Confidence 0 00 0 000001 1 1257788999999988999999987665 666544321
Q ss_pred ----CceEEEe-CCCCCccceeEecCCCeEEEEeCCCCeEEEEeCCCCc-------eEEEEecCCCCCeEEEEeCCCCeE
Q psy5806 772 ----GRERLVV-NDLNRTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKN-------AKVLFWLNLYRPRSIVVHYGLGLM 839 (1332)
Q Consensus 772 ----~~~~vi~-~~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~-------~~~l~~~~~~~P~~Iavdp~~g~l 839 (1332)
....+.. .....|.|+++ | .++||+++...++|.+..+++.. ...++ ....+|++|+++|. |.|
T Consensus 253 ~~~~~~~p~~~~~~~~ap~G~~~-~-~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~-~~~~rp~~v~~~pd-G~l 328 (352)
T 2ism_A 253 NDPRYRDPLYFWPQGFPPGNLAF-F-RGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL-SGFGRLREVQVGPD-GAL 328 (352)
T ss_dssp CCTTSCCCSEECTTCCCEEEEEE-E-TTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE-ESSCCEEEEEECTT-SCE
T ss_pred CCCCCcCCeEecCCCCCCcceEE-E-CCEEEEEECCCCEEEEEEECCCCcceeecchheec-ccCCCeeEEEECCC-CcE
Confidence 0111111 22346899999 4 55899999999999999886442 12333 34578999999997 899
Q ss_pred EEEecccC
Q psy5806 840 VWADWSRT 847 (1332)
Q Consensus 840 ywtd~g~~ 847 (1332)
|+++++..
T Consensus 329 yv~~~~~~ 336 (352)
T 2ism_A 329 YVTTSNRD 336 (352)
T ss_dssp EEEECSTT
T ss_pred EEEEeCCC
Confidence 99998644
No 61
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.32 E-value=4.9e-10 Score=131.42 Aligned_cols=266 Identities=11% Similarity=0.070 Sum_probs=170.1
Q ss_pred EEeCCCCCCccEEEeccCCeEEEEeCCCCeEEEEeCCCCCcEEEE-----eCCCCCceEEEEecC---CCeEEEEecC--
Q psy5806 504 VIRHNTKKPAGVAIDWRTNKLYWTESEYNWIEVSNLDGTYPTLLF-----WQNLSEPRDIAVNPI---GGIMYWCSWG-- 573 (1332)
Q Consensus 504 v~~~~~~~p~glAvDw~~~~lYw~d~~~~~I~v~~l~g~~~~~l~-----~~~~~~P~~iavdp~---~G~lywtd~g-- 573 (1332)
++..++..|.+||++.- ++||+++.. ++|.+.+.+|. +++. ..+...|.+||++|. +|+||+++..
T Consensus 23 ~va~~l~~P~~ia~~pd-G~l~V~e~~-g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~ 98 (354)
T 3a9g_A 23 EVASDLEVPWSIAPLGG-GRYLVTERP-GRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFA 98 (354)
T ss_dssp EEECSCSCEEEEEEEET-TEEEEEETT-TEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred EEeCCCCCCeEEEEcCC-CeEEEEeCC-CEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccC
Confidence 44457899999999984 579999876 89999987776 3332 245678999999998 8999999853
Q ss_pred CC----CceEEEcCCCC-----ceEEEEe----CCCCCceeeEEeccCCeEEEEeCCCCeEEEEecCCCceEEEEeecce
Q psy5806 574 DL----HKIEMAGMDGS-----HRHILAS----DSLKNPTGLAIDLENSRLYWANVGLKTIEFTNLDGTRKQTLIALHHL 640 (1332)
Q Consensus 574 ~~----~~I~r~~~dG~-----~~~~l~~----~~l~~p~glaiD~~~~rLYw~d~~~~~I~~~~~dG~~~~~~~~~~~l 640 (1332)
.. .+|.|...++. ..++++. ...+.|++|++++.. +||++....+..
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG-~Lyvt~G~~~~~------------------- 158 (354)
T 3a9g_A 99 EGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDG-MLYITTGDAADP------------------- 158 (354)
T ss_dssp GGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTS-CEEEECCCTTCG-------------------
T ss_pred CCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCC-cEEEEECCCCCC-------------------
Confidence 22 68999988876 2444432 335678999999855 799997542100
Q ss_pred EEEeeecCceeEEEEeCCCCcCcCCCcCCCCCCccccccCCCCCceeeCCCCccccCCCCccccCCccceEeeccceeEE
Q psy5806 641 KVMTKVVGLTDIDIFHRRRSKKTHPCNENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSENPSKFLLVSQTDKIRQ 720 (1332)
Q Consensus 641 ~v~~~~~~~~~i~v~~~~~q~~~~pC~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~ll~s~~~~i~~ 720 (1332)
+...+ +. +....|.+
T Consensus 159 -------------------------~~~~d----------~~------------------------------~~~G~I~r 173 (354)
T 3a9g_A 159 -------------------------RLAQD----------LS------------------------------SLAGKILR 173 (354)
T ss_dssp -------------------------GGGTC----------TT------------------------------CCSSEEEE
T ss_pred -------------------------ccccC----------CC------------------------------CCCeEEEE
Confidence 00000 00 00112222
Q ss_pred EecCCCCC------cceeeecccccceeEEeecCCCceEEEEecCCCc---eEEEecCCC--------------CceEEE
Q psy5806 721 ISLDVEYR------YPIVLPLRQLKMVASVDVDTKNEYIYWSDISEKT---IERVRFDMT--------------GRERLV 777 (1332)
Q Consensus 721 i~l~~~~~------~~~~~~~~~~~~~~~id~d~~~~~lYwsD~~~~~---I~r~~~~g~--------------~~~~vi 777 (1332)
++.+.... ...+. ..+++++.++++|+.++.||++|...+. |.++...+. ....+.
T Consensus 174 i~~dG~~p~~npf~~~~i~-a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~ 252 (354)
T 3a9g_A 174 VDEEGRPPADNPFPNSPIW-SYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVI 252 (354)
T ss_dssp ECTTSCCCTTSSSTTCCEE-EECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSE
T ss_pred EcCCCCCCCCCCCCCCcEE-EEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEe
Confidence 22221100 00011 1367889999999988999999987654 555543221 011222
Q ss_pred e--CCCCCccceeE-------ecCCCeEEEEeCCCCeEEEEeCCCC--ce--EEEEecCCCCCeEEEEeCCCCeEEEEec
Q psy5806 778 V--NDLNRTESIAV-------DAIGRKIYWTDMNAQTIMVSDIDGK--NA--KVLFWLNLYRPRSIVVHYGLGLMVWADW 844 (1332)
Q Consensus 778 ~--~~~~~p~glAv-------D~~~~nLYwtD~~~~~I~v~~ldG~--~~--~~l~~~~~~~P~~Iavdp~~g~lywtd~ 844 (1332)
. .....|.|+++ +|.+ +||+++....+|.+..+++. .. ..++.....+|++|+++|. |.||++++
T Consensus 253 ~~~~~~~ap~G~~~y~g~~fp~~~G-~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pD-G~lyv~~~ 330 (354)
T 3a9g_A 253 DTGSETWAPSGASFVHGDMFPGLRG-WLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDD-GGILISTS 330 (354)
T ss_dssp ECTTCCCCEEEEEECCSSSCGGGTT-EEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTT-SCEEEEEC
T ss_pred ecCCCCcCCcceEEECCCCCcccCC-cEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCC-CcEEEEEe
Confidence 2 12346999999 6654 89999999999999999753 21 2333223568999999997 89999997
Q ss_pred ccC-cC----CCCceEEEecCC
Q psy5806 845 SRT-RL----TNNRIEMAHMDG 861 (1332)
Q Consensus 845 g~~-~~----~~~~I~r~~~dG 861 (1332)
... +. ...+|.|....|
T Consensus 331 ~~~G~g~~~~~~g~i~ri~~~g 352 (354)
T 3a9g_A 331 NRDGRGSLRAGDDKILKIVSEQ 352 (354)
T ss_dssp TTSSSSCCCTTCSCEEEEEETT
T ss_pred CCCCCcCCCCCCCEEEEEecCC
Confidence 422 00 012677776544
No 62
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.28 E-value=9.8e-09 Score=120.38 Aligned_cols=318 Identities=11% Similarity=0.055 Sum_probs=195.6
Q ss_pred CCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCC--cEEEec-ccccCceeEEeCCCCCeEEEEeC---CCCeEEE
Q psy5806 826 RPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTN--RAVFET-EVIWPSCLAIDYSDNPKLYWVDT---SKHTIEY 899 (1332)
Q Consensus 826 ~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~--~~~l~~-~l~~P~gl~iD~~~~~~lYw~d~---~~~~I~~ 899 (1332)
.|..++..+..-++|+..+... ....|....+|... .+.+.. ....|.+|+++.++ +.||.+.. ..+.|..
T Consensus 3 ~p~~~~~~~~~~~~~vg~y~~~--~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg-~~l~~~~~~~~~~~~v~~ 79 (361)
T 3scy_A 3 QPTDPSTTDSELTMLVGTYTSG--NSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADG-KFVYSVNEFSKDQAAVSA 79 (361)
T ss_dssp ---CCCGGGGEEEEEEEECCSS--SCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTS-SEEEEEECCSSTTCEEEE
T ss_pred CCCChhhCCCceEEEEEeccCC--CCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCC-CEEEEEEccCCCCCcEEE
Confidence 3555555555556777665422 12457777666432 122211 47789999999999 89999987 3467765
Q ss_pred EccCC--CceeEEec---cCCcceEEEEeCCEEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccC
Q psy5806 900 KTLAT--GRAKRAYA---VQSHPYTLTVLDYYVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGS 974 (1332)
Q Consensus 900 ~~~dG--~~~~~l~~---~~~~P~~la~~~~~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~ 974 (1332)
.+++. ...+.+.. ....|..+++.+.+||.++...++|...+.... +
T Consensus 80 ~~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~---------------------g------- 131 (361)
T 3scy_A 80 FAFDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQD---------------------G------- 131 (361)
T ss_dssp EEEETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTT---------------------S-------
T ss_pred EEEeCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCC---------------------C-------
Confidence 55543 33333322 456788888877789999887777764331100 0
Q ss_pred CCCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEEeecceEEEEeCCCCCCCCcccccCCccceEEEEEeC
Q psy5806 975 NNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHY 1054 (1332)
Q Consensus 975 ~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~ 1054 (1332)
. +. . ...++ ........ .. -.....+.+++|++
T Consensus 132 ---~---------------------~~--------~-~~~~~-----------~~~g~~~~-~~--~~~~~~~~~~~~sp 164 (361)
T 3scy_A 132 ---A---------------------LL--------P-ASDVI-----------EFKGSGPD-KE--RQTMPHLHCVRITP 164 (361)
T ss_dssp ---C---------------------BC--------S-CSEEE-----------ECCCCCSC-TT--TCSSCCEEEEEECT
T ss_pred ---c---------------------Cc--------c-cceeE-----------EccCCCCC-cc--ccCCCcceEEEECC
Confidence 0 00 0 00000 00000000 00 01123467899999
Q ss_pred CCcEEEEEeCCCCeEEEEECCCCCC------c------eeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCc-
Q psy5806 1055 SKNLIYFADMRSGNLRTFDMSDSTR------I------KPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQ- 1121 (1332)
Q Consensus 1055 ~~~~lY~sd~~~~~I~~~~l~~g~~------~------~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~- 1121 (1332)
.+++||+++...+.|..++++..+. . ..+.......|.++++++.++.||+++...+.|.+++++..
T Consensus 165 dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~ 244 (361)
T 3scy_A 165 DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM 244 (361)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE
T ss_pred CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc
Confidence 9999999998889998887764332 1 12222334579999999999999999988889999999743
Q ss_pred eEEE--Ee---cCCCCceEEEEcCCCcEEEEEecC-CCCCCCCCcEEEEecC--CCceEEE--EecCCCCcceEEEecCC
Q psy5806 1122 HKKI--LV---NDLMEPLAIAVYPRRGLLFYSHWG-LYDNSPTTKIEKVYLD--GSYRTVL--VEEDLAFPNELAIDFKQ 1191 (1332)
Q Consensus 1122 ~~~~--~~---~~~~~P~~iavdp~~g~Lywtd~~-~~~~~~~~~I~r~~ld--G~~~~~l--~~~~l~~p~glaiD~~~ 1191 (1332)
...+ +. .....|++|+++|...+||+++.+ . ..|...+++ ....+.+ +.. -..|.+|++++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~------~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg 317 (361)
T 3scy_A 245 LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKA------DGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNG 317 (361)
T ss_dssp EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSS------CEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTS
T ss_pred eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCC------CEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCC
Confidence 2222 21 234568999999988889999877 4 456665554 2232222 222 3579999999999
Q ss_pred CEEEEEEcCCCeEEEEecC--CCceEEEEe---ecccceEEE
Q psy5806 1192 RRLFWADSTNKRIEYCDFF--GRSRKIVIS---KVAPYGLSV 1228 (1332)
Q Consensus 1192 ~~LY~~d~~~~~I~~~d~d--G~~~~~~~~---~~~P~glav 1228 (1332)
+.||+++...+.|..+.+| ....+.+.. ...|..|++
T Consensus 318 ~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~ 359 (361)
T 3scy_A 318 KYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKF 359 (361)
T ss_dssp CEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEE
T ss_pred CEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEE
Confidence 9999999888888886555 323332222 455666654
No 63
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.28 E-value=3.1e-09 Score=122.77 Aligned_cols=304 Identities=10% Similarity=0.037 Sum_probs=186.1
Q ss_pred CCeEEEEeCCCCeEEEEeCC--CCceEEEEecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecC--CCCcEEEe
Q psy5806 793 GRKIYWTDMNAQTIMVSDID--GKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMD--GTNRAVFE 868 (1332)
Q Consensus 793 ~~nLYwtD~~~~~I~v~~ld--G~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~d--G~~~~~l~ 868 (1332)
.+.||+++...+.|.+.+++ |+............|.+++++|...+||++.... .+|....++ +.....+.
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-----~~v~~~~~~~~~~~~~~~~ 78 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPE-----FRVLAYRIAPDDGALTFAA 78 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTT-----TEEEEEEECTTTCCEEEEE
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCC-----CeEEEEEecCCCCceeecc
Confidence 45789998888999999886 4433332223346799999999977899988643 367776666 33323222
Q ss_pred c--ccccCceeEEeCCCCCeEEEEeCCCCeEEEEccC-CCceeEEe--ccCCcceEEEEe--CCEEEEEeCCCCEEEEEE
Q psy5806 869 T--EVIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLA-TGRAKRAY--AVQSHPYTLTVL--DYYVYWTDVQHSKIYRAN 941 (1332)
Q Consensus 869 ~--~l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~d-G~~~~~l~--~~~~~P~~la~~--~~~iywtD~~~~~i~~~~ 941 (1332)
. ....|.+++++.++ +.||++....+.|...+++ |...+.+. .....|.++++. +.+||.++...+.|..
T Consensus 79 ~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~-- 155 (343)
T 1ri6_A 79 ESALPGSLTHISTDHQG-QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICL-- 155 (343)
T ss_dssp EEECSSCCSEEEECTTS-SEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEE--
T ss_pred ccccCCCCcEEEEcCCC-CEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEE--
Confidence 2 13478999999999 8899998877778777763 22111111 123344455544 3355555444444332
Q ss_pred CCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEEeec
Q psy5806 942 KYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRF 1021 (1332)
Q Consensus 942 ~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~ 1021 (1332)
T Consensus 156 -------------------------------------------------------------------------------- 155 (343)
T 1ri6_A 156 -------------------------------------------------------------------------------- 155 (343)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEeCCCCCCCCc----ccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCce----eEeec--C---C
Q psy5806 1022 GVIRRISLDTADLLPV----TLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIK----PIPLM--N---D 1088 (1332)
Q Consensus 1022 ~~i~~i~l~~~~~~~~----~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~----~i~~~--~---~ 1088 (1332)
+++........ ....+....+.+++|++.++.||+++...+.|..++++..++.. .+... + .
T Consensus 156 -----~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 230 (343)
T 1ri6_A 156 -----FTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDT 230 (343)
T ss_dssp -----EEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSC
T ss_pred -----EEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccccc
Confidence 11111000000 00111123467899999999999999888999999985322211 11111 1 2
Q ss_pred CCceeeEEEecCCeEEEEcCCCceEEEEeeC--Cc-eEEE--EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEE
Q psy5806 1089 TIRDNFVIDWVANNIYYIDSQMHTINVARSD--GQ-HKKI--LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEK 1163 (1332)
Q Consensus 1089 ~~p~glAvDw~~~~LY~td~~~~~I~v~~ld--G~-~~~~--~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r 1163 (1332)
..|.+|++++.++.||++....+.|.+++++ +. ...+ +... ..|.+++++|...+||++.... ..-.|++
T Consensus 231 ~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~----~~v~v~~ 305 (343)
T 1ri6_A 231 RWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE-TQPRGFNVDHSGKYLIAAGQKS----HHISVYE 305 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS-SSCCCEEECTTSSEEEEECTTT----CEEEEEE
T ss_pred CCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC-CccceEEECCCCCEEEEecCCC----CeEEEEE
Confidence 3566899999999999999888899999997 32 2222 3333 4599999999888899998544 1233455
Q ss_pred EecCCCceEEEEecCC-CCcceEEEecCCCEE
Q psy5806 1164 VYLDGSYRTVLVEEDL-AFPNELAIDFKQRRL 1194 (1332)
Q Consensus 1164 ~~ldG~~~~~l~~~~l-~~p~glaiD~~~~~L 1194 (1332)
++.+....+.+..-.. ..|.+|+++++.+++
T Consensus 306 ~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~~~ 337 (343)
T 1ri6_A 306 IVGEQGLLHEKGRYAVGQGPMWVVVNAHEGGS 337 (343)
T ss_dssp EETTTTEEEEEEEEECSSSCCEEEEEEEC---
T ss_pred EcCCCceeeEccccccCCCCeeEEEEcccCCc
Confidence 5554443333322122 679999999877664
No 64
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.27 E-value=7.3e-10 Score=128.39 Aligned_cols=201 Identities=13% Similarity=0.166 Sum_probs=147.0
Q ss_pred cceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCC----ceEEEEeeCC
Q psy5806 1045 MSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQM----HTINVARSDG 1120 (1332)
Q Consensus 1045 ~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~----~~I~v~~ldG 1120 (1332)
..+.+++|++.+ +|||++...+.|++++++++. ...+.......|.+|++|.. ++||++.... +.|.+++.++
T Consensus 45 ~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~i~~~~d-g~l~v~~~~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 45 LQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKE-IKRPFVSHKANPAAIKIHKD-GRLFVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp CCEEEEEECTTS-CEEEEETTTCEEEEECTTTCC-EEEEEECSSSSEEEEEECTT-SCEEEEECTTSSSCCEEEEECTTS
T ss_pred ccccCcEECCCC-CEEEEECCCCEEEEEeCCCCc-EEEEeeCCCCCcceEEECCC-CcEEEEeCCCCCCCceEEEEeCCC
Confidence 346788999765 599999888999999976433 33333234467999999964 5788987765 6898899887
Q ss_pred ceEE-EEe--cCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEE
Q psy5806 1121 QHKK-ILV--NDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWA 1197 (1332)
Q Consensus 1121 ~~~~-~~~--~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~ 1197 (1332)
.... .+. .....|.+|+++| .|.||+++...........|++++.++.....+.. ....|++|+++++++.||++
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~i~~~~dg~~l~v~ 199 (333)
T 2dg1_A 122 DNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-NISVANGIALSTDEKVLWVT 199 (333)
T ss_dssp CSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE-EESSEEEEEECTTSSEEEEE
T ss_pred CEEEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEeec-CCCcccceEECCCCCEEEEE
Confidence 6544 332 1235799999999 68999998642101123679999988765555443 45779999999998899999
Q ss_pred EcCCCeEEEEecC--CCceEE-----EEe---ecccceEEEecCCccccccEEEEEECCCCEEEEEEec
Q psy5806 1198 DSTNKRIEYCDFF--GRSRKI-----VIS---KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREK 1256 (1332)
Q Consensus 1198 d~~~~~I~~~d~d--G~~~~~-----~~~---~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~ 1256 (1332)
+...+.|.+++++ |..... ... ...|.+|++ +.++.||++++..+.|.++++.
T Consensus 200 ~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~------d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 200 ETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCI------DSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEE------BTTCCEEEEEETTTEEEEECTT
T ss_pred eCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEE------CCCCCEEEEEcCCCEEEEECCC
Confidence 9888999999994 443322 222 247999999 4567899999988999999873
No 65
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.27 E-value=1.8e-09 Score=122.97 Aligned_cols=248 Identities=10% Similarity=0.014 Sum_probs=168.5
Q ss_pred CCCCcEEEecccccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEeccCCcceEEEEe-CCEEEEEeCCCCEEE
Q psy5806 860 DGTNRAVFETEVIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYAVQSHPYTLTVL-DYYVYWTDVQHSKIY 938 (1332)
Q Consensus 860 dG~~~~~l~~~l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~~~~~P~~la~~-~~~iywtD~~~~~i~ 938 (1332)
.|...+.+...+..|.|+++|.++ ++|||++...+.|...+.++. .+.+......|.+|++. ++.||+++...+.|.
T Consensus 16 ~~~~~~~l~~~~~~~eg~~~d~~g-~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 16 AGAEARRLADGFTWTEGPVYVPAR-SAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLE 93 (296)
T ss_dssp TTCCCEEEECCCSSEEEEEEEGGG-TEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred CCCcEEEEecCCccccCCeEeCCC-CEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCCCeEE
Confidence 344556666668889999999998 789999999999999999988 66665566779999997 568999988888888
Q ss_pred EEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEE
Q psy5806 939 RANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYT 1018 (1332)
Q Consensus 939 ~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~ 1018 (1332)
+.+..+|+... ... .
T Consensus 94 ~~d~~~g~~~~---------~~~-~------------------------------------------------------- 108 (296)
T 3e5z_A 94 RQREPGGEWES---------IAD-S------------------------------------------------------- 108 (296)
T ss_dssp EECSTTCCEEE---------EEC-E-------------------------------------------------------
T ss_pred EEcCCCCcEEE---------Eee-c-------------------------------------------------------
Confidence 76654441100 000 0
Q ss_pred eecceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeC-----------------CCCeEEEEECCCCCCce
Q psy5806 1019 SRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADM-----------------RSGNLRTFDMSDSTRIK 1081 (1332)
Q Consensus 1019 ~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~-----------------~~~~I~~~~l~~g~~~~ 1081 (1332)
... .....+.++++++. ++||++|. ..+.|++++.+ +. .
T Consensus 109 -~~~-------------------~~~~~~~~i~~d~~-G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~--~ 164 (296)
T 3e5z_A 109 -FEG-------------------KKLNSPNDVCLAPD-GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT--L 164 (296)
T ss_dssp -ETT-------------------EECCCCCCEEECTT-SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC--E
T ss_pred -cCC-------------------CCCCCCCCEEECCC-CCEEEECCccccccccccccccccCCCcEEEEECCC-CC--E
Confidence 000 00011223344443 23555432 13456666533 22 2
Q ss_pred eEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC--Cce---EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCC
Q psy5806 1082 PIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD--GQH---KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNS 1156 (1332)
Q Consensus 1082 ~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld--G~~---~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~ 1156 (1332)
..+......|.|||+++.++.| |++...++|.+++++ |+. ..++......|.+|++|+ +|.||++. .
T Consensus 165 ~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~--~---- 236 (296)
T 3e5z_A 165 SAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDA-GGLIWASA--G---- 236 (296)
T ss_dssp EEEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBT-TSCEEEEE--T----
T ss_pred EEeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECC-CCCEEEEc--C----
Confidence 2223556789999999888888 999999999999985 544 233422446799999999 68899998 3
Q ss_pred CCCcEEEEecCCCceEEEEecCCCCcceEEEe-cCCCEEEEEEcCCCeEEEEecCCC
Q psy5806 1157 PTTKIEKVYLDGSYRTVLVEEDLAFPNELAID-FKQRRLFWADSTNKRIEYCDFFGR 1212 (1332)
Q Consensus 1157 ~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD-~~~~~LY~~d~~~~~I~~~d~dG~ 1212 (1332)
..|.+.+.+|.....+-. ... |..++++ ++++.||++.. +.|.++++...
T Consensus 237 --~~v~~~~~~g~~~~~~~~-~~~-~~~~~f~~~d~~~L~v~t~--~~l~~~~~~~~ 287 (296)
T 3e5z_A 237 --DGVHVLTPDGDELGRVLT-PQT-TSNLCFGGPEGRTLYMTVS--TEFWSIETNVR 287 (296)
T ss_dssp --TEEEEECTTSCEEEEEEC-SSC-CCEEEEESTTSCEEEEEET--TEEEEEECSCC
T ss_pred --CeEEEECCCCCEEEEEEC-CCC-ceeEEEECCCCCEEEEEcC--CeEEEEEcccc
Confidence 469999999866544433 334 8999995 67788999865 58999988654
No 66
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.27 E-value=2e-10 Score=131.67 Aligned_cols=223 Identities=16% Similarity=0.143 Sum_probs=155.7
Q ss_pred CCccceEEEEEeCCCcEEEEE-------eCCCCeEEEEECCCCCCceeEeec----CCCCceeeEEEecCCeEEEEcCCC
Q psy5806 1042 PEYMSSIFFDYHYSKNLIYFA-------DMRSGNLRTFDMSDSTRIKPIPLM----NDTIRDNFVIDWVANNIYYIDSQM 1110 (1332)
Q Consensus 1042 ~~~~~~~~id~d~~~~~lY~s-------d~~~~~I~~~~l~~g~~~~~i~~~----~~~~p~glAvDw~~~~LY~td~~~ 1110 (1332)
.++..|.+++|++ ++.|||+ +...+.|+++++.++.. ..+... ....|.+|++|..+++||+++...
T Consensus 15 ~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~ 92 (314)
T 1pjx_A 15 EDIPGAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKK-TVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL 92 (314)
T ss_dssp CCCTTCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCE-EEEECCEETTEECCEEEEEECSSSSEEEEEETTT
T ss_pred ccCCCccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCCcE-EEEEecccCCCCCCCceEEEecCCCcEEEEECCC
Confidence 3456788999995 5579999 77788999998664432 222210 225799999997658999998754
Q ss_pred ceEEEEeeCCceEEE-Eec----CCCCceEEEEcCCCcEEEEEecCC---------CCCCCCCcEEEEecCCCceEEEEe
Q psy5806 1111 HTINVARSDGQHKKI-LVN----DLMEPLAIAVYPRRGLLFYSHWGL---------YDNSPTTKIEKVYLDGSYRTVLVE 1176 (1332)
Q Consensus 1111 ~~I~v~~ldG~~~~~-~~~----~~~~P~~iavdp~~g~Lywtd~~~---------~~~~~~~~I~r~~ldG~~~~~l~~ 1176 (1332)
.|.+++.+|+.... ... ....|++|++|| .|.||+++.+. ........|++.+.+|+. ..+..
T Consensus 93 -~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~-~~~~~ 169 (314)
T 1pjx_A 93 -GLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQM-IQVDT 169 (314)
T ss_dssp -EEEEEETTSCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCE-EEEEE
T ss_pred -CEEEEeCCCCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCCCCE-EEecc
Confidence 78888888654332 211 224699999999 68999998642 001112579999988543 33333
Q ss_pred cCCCCcceEEEe----cCCCEEEEEEcCCCeEEEEecC--CC--ceEEEEe-e----cccceEEEecCCccccccEEEEE
Q psy5806 1177 EDLAFPNELAID----FKQRRLFWADSTNKRIEYCDFF--GR--SRKIVIS-K----VAPYGLSVRQSPGKAFIVELYWT 1243 (1332)
Q Consensus 1177 ~~l~~p~glaiD----~~~~~LY~~d~~~~~I~~~d~d--G~--~~~~~~~-~----~~P~glav~~~~~~~~~~~lYwt 1243 (1332)
.+..|++++++ ++++.||+++...++|.+++++ |. .+..+.. . ..|.+|++ +.++.||++
T Consensus 170 -~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~------d~~G~l~v~ 242 (314)
T 1pjx_A 170 -AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDF------DEDNNLLVA 242 (314)
T ss_dssp -EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEE------BTTCCEEEE
T ss_pred -CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEE------CCCCCEEEE
Confidence 45789999999 8888999999999999999986 32 1223333 1 67999999 456899999
Q ss_pred ECCCCEEEEEEecCCCCcceEEEEecCCCCeeeEEE
Q psy5806 1244 DWEAMSVVIAREKSDTGQWDVHLIRSNQEDFLNIKA 1279 (1332)
Q Consensus 1244 d~~~~~V~~~~~~~g~~~~~~~~~~~~~~~~~~i~~ 1279 (1332)
++..+.|.++++.++ .....+......+..|..
T Consensus 243 ~~~~~~i~~~d~~~g---~~~~~~~~~~~~~~~i~~ 275 (314)
T 1pjx_A 243 NWGSSHIEVFGPDGG---QPKMRIRCPFEKPSNLHF 275 (314)
T ss_dssp EETTTEEEEECTTCB---SCSEEEECSSSCEEEEEE
T ss_pred EcCCCEEEEEcCCCC---cEeEEEeCCCCCceeEEE
Confidence 999999999998766 444444444345555543
No 67
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.26 E-value=1.4e-10 Score=135.81 Aligned_cols=192 Identities=11% Similarity=0.115 Sum_probs=138.7
Q ss_pred CccceEEEEEeCCCcEEEEEeCC-----CCeEEEEECCCCCCceeEeec-C----CCCceeeEEEecCCeEEEEcC---C
Q psy5806 1043 EYMSSIFFDYHYSKNLIYFADMR-----SGNLRTFDMSDSTRIKPIPLM-N----DTIRDNFVIDWVANNIYYIDS---Q 1109 (1332)
Q Consensus 1043 ~~~~~~~id~d~~~~~lY~sd~~-----~~~I~~~~l~~g~~~~~i~~~-~----~~~p~glAvDw~~~~LY~td~---~ 1109 (1332)
.+..|.+|++|+. ++|||+|.. .++|.++++.++.-...+... . ...|.+||+|..++.+|++|. .
T Consensus 65 ~~~~p~gv~~d~~-g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 65 TFDTVLGIKSDGN-GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCSCEEEEEECSS-SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred ceeEeeEEEEcCC-CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 3456899999987 579999976 578999998744323333211 1 135799999987889999998 7
Q ss_pred CceEEEEeeC-CceEEEEec--------------C---------------CCCceEEEEcCCCcEEEEEecCCCCCCCCC
Q psy5806 1110 MHTINVARSD-GQHKKILVN--------------D---------------LMEPLAIAVYPRRGLLFYSHWGLYDNSPTT 1159 (1332)
Q Consensus 1110 ~~~I~v~~ld-G~~~~~~~~--------------~---------------~~~P~~iavdp~~g~Lywtd~~~~~~~~~~ 1159 (1332)
.+.|.+++++ |+...++.. + ...|.+||++|....||+++... .
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~------~ 217 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS------T 217 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC------S
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC------C
Confidence 7899999987 544333311 0 13479999999777999999765 6
Q ss_pred cEEEEecC----CC--ce-----EEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEec-CCCceEEEEe---ecccc
Q psy5806 1160 KIEKVYLD----GS--YR-----TVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDF-FGRSRKIVIS---KVAPY 1224 (1332)
Q Consensus 1160 ~I~r~~ld----G~--~~-----~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~-dG~~~~~~~~---~~~P~ 1224 (1332)
+|++++.+ +. .. ..... ....|.||++|.+ ++||+++...++|.++|. +|+. ..++. ...|.
T Consensus 218 ~l~~~~~~~~~~~~~~~~~~~~~~~~~g-~~g~pdgia~d~~-G~l~va~~~~~~V~~~d~~~G~~-~~~~~~~~~~~p~ 294 (343)
T 2qe8_A 218 SMYRIKSADLSNLQLTDAELGSKIERYS-EKPICDGISIDKD-HNIYVGDLAHSAIGVITSADRAY-KLLVTDEKLSWTD 294 (343)
T ss_dssp EEEEEEHHHHTCTTCCHHHHHTTCEEEE-ECCSCSCEEECTT-CCEEEEEGGGTEEEEEETTTTEE-EEEEECGGGSCEE
T ss_pred eEEEEEHHHhcCCCCChhhhhcceEecc-cCCCCceEEECCC-CCEEEEccCCCeEEEEECCCCCE-EEEEECCceecCC
Confidence 89999753 21 00 01111 2358999999975 789999999999999999 7753 33333 67899
Q ss_pred eEEEecCCccccccEEEEEECCCCEE
Q psy5806 1225 GLSVRQSPGKAFIVELYWTDWEAMSV 1250 (1332)
Q Consensus 1225 glav~~~~~~~~~~~lYwtd~~~~~V 1250 (1332)
+|++ +.+++||+++...+++
T Consensus 295 ~va~------~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 295 SFNF------GSDGYLYFDCNQLHHS 314 (343)
T ss_dssp EEEE------CTTSCEEEEECCGGGS
T ss_pred eeEE------CCCCcEEEEeCccccc
Confidence 9999 3468899999765544
No 68
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.24 E-value=2.1e-08 Score=116.75 Aligned_cols=284 Identities=13% Similarity=0.136 Sum_probs=180.6
Q ss_pred eEEEEecccCcCCCCceEEEecCCCCc-EE---EecccccCceeEEeCCCCCeEEEEeCC--CCeEEEEccCCCceeEEe
Q psy5806 838 LMVWADWSRTRLTNNRIEMAHMDGTNR-AV---FETEVIWPSCLAIDYSDNPKLYWVDTS--KHTIEYKTLATGRAKRAY 911 (1332)
Q Consensus 838 ~lywtd~g~~~~~~~~I~r~~~dG~~~-~~---l~~~l~~P~gl~iD~~~~~~lYw~d~~--~~~I~~~~~dG~~~~~l~ 911 (1332)
+||+..+... ....|....+|.... .. .......|.+++++.++ + ||+++.. .+.|...++++...+.+.
T Consensus 4 ~~~vg~y~~~--~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg-~-l~~~~~~~~~~~v~~~~~~~g~~~~~~ 79 (347)
T 3hfq_A 4 RILFGTYTKK--TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKD-C-LYSVDKEDDEGGIAAWQIDGQTAHKLN 79 (347)
T ss_dssp EEEEEECCSS--SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTC-E-EEEEEEETTEEEEEEEEEETTEEEEEE
T ss_pred EEEEEeccCC--CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCC-e-EEEEEecCCCceEEEEEecCCcEEEee
Confidence 5666654322 113566666665322 11 12227789999999987 4 9998863 578888888765544443
Q ss_pred c---cCCcceEEEEe--CCEEEEEeCCCCEEEEEECC-CCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCcccccc
Q psy5806 912 A---VQSHPYTLTVL--DYYVYWTDVQHSKIYRANKY-DVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLR 985 (1332)
Q Consensus 912 ~---~~~~P~~la~~--~~~iywtD~~~~~i~~~~~~-~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~ 985 (1332)
. ....|.+|++. +.+||.++...+.|...+.. +|+
T Consensus 80 ~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~--------------------------------------- 120 (347)
T 3hfq_A 80 TVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA--------------------------------------- 120 (347)
T ss_dssp EEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSC---------------------------------------
T ss_pred eeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCC---------------------------------------
Confidence 2 46678888887 55799888777776543211 000
Q ss_pred CCCCccccCCCCeeEccCCccccccCcceEEEEeecceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCC
Q psy5806 986 NPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMR 1065 (1332)
Q Consensus 986 ~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~ 1065 (1332)
.. . +..+..... .+ . +-.....+.++++++.++ +|+++..
T Consensus 121 ---------------------------~~-------~-~~~~~~~~~--~p-~-~~~~~~~~~~~~~spdg~-l~v~~~~ 160 (347)
T 3hfq_A 121 ---------------------------LT-------L-TDTVQHSGH--GP-R-PEQDGSHIHYTDLTPDNR-LAVIDLG 160 (347)
T ss_dssp ---------------------------EE-------E-EEEEECCCC--CS-S-TTCSSCCEEEEEECTTSC-EEEEETT
T ss_pred ---------------------------ee-------e-cceeecCCC--CC-C-ccccCCCceEEEECCCCc-EEEEeCC
Confidence 00 0 111111100 00 0 111233477899999888 9999988
Q ss_pred CCeEEEEECC-CCCCcee--EeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCC---ceEEE--EecC------CC
Q psy5806 1066 SGNLRTFDMS-DSTRIKP--IPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDG---QHKKI--LVND------LM 1131 (1332)
Q Consensus 1066 ~~~I~~~~l~-~g~~~~~--i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG---~~~~~--~~~~------~~ 1131 (1332)
.+.|..++++ +|.-... +.......|.++++++.++.||+++...+.|.+++++. +...+ +... ..
T Consensus 161 ~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHN 240 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCC
T ss_pred CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCC
Confidence 8999988877 2321111 11122337899999999999999998889999999873 33222 2211 14
Q ss_pred CceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCC-ceEEE--EecCCCCcceEEEecCCCEEEEEEcCCCeEEEEe
Q psy5806 1132 EPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGS-YRTVL--VEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCD 1208 (1332)
Q Consensus 1132 ~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~-~~~~l--~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d 1208 (1332)
.|.+|+++|...+||+++.+. ..|...+++.. ..+.+ +...-..|.+|+++++++.||+++...+.|..++
T Consensus 241 ~~~~i~~spdG~~l~v~~~~~------~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRGY------NTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYA 314 (347)
T ss_dssp EEEEEEECTTSCEEEEEEETT------TEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred cceeEEECCCCCEEEEEeCCC------CEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEE
Confidence 589999999877899998765 56777776522 22222 2222356999999999999999999888888875
Q ss_pred cC
Q psy5806 1209 FF 1210 (1332)
Q Consensus 1209 ~d 1210 (1332)
+|
T Consensus 315 ~d 316 (347)
T 3hfq_A 315 RD 316 (347)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 69
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.24 E-value=4.9e-09 Score=121.00 Aligned_cols=288 Identities=8% Similarity=-0.006 Sum_probs=186.8
Q ss_pred ecCCCceEEEEecCCCceEEEecCCCCceEEEeCCCCCccceeEecCCCeEEEEeCCCCeEEEEeCCCCce-EEEEecCC
Q psy5806 746 VDTKNEYIYWSDISEKTIERVRFDMTGRERLVVNDLNRTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNA-KVLFWLNL 824 (1332)
Q Consensus 746 ~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~-~~l~~~~~ 824 (1332)
|+...+++|+++...+.|..+++........+..+...| ++++++.++.||+++...++|.+.++++... ...+. ..
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~ 82 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ-EG 82 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE-EC
T ss_pred EcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc-cC
Confidence 556678999999999999999987655555555566677 9999999999999999888999999965443 22222 23
Q ss_pred CCCeE-EEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEecccccCceeEEeCCCCCeEEEEeCCCCe-EEEEcc
Q psy5806 825 YRPRS-IVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFETEVIWPSCLAIDYSDNPKLYWVDTSKHT-IEYKTL 902 (1332)
Q Consensus 825 ~~P~~-Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~~l~~P~gl~iD~~~~~~lYw~d~~~~~-I~~~~~ 902 (1332)
..|.. ++++|...+|| +..+.. ..++|...+++.............|.++++++++ ++||.++...+. |...++
T Consensus 83 ~~~~~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNG-NGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp SSCCCCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTTEEEEEEECCTTEEEEEECTTS-SCEEEEEETTTTEEEEEEE
T ss_pred CCCccceEECCCCCEEE-EecCCC--CcccEEEEECCCCCeEEEEECCCCccceEECCCC-CEEEEEecCCCceEEEEEE
Confidence 57888 99999977888 433322 0127888877654333333335568999999999 889999887677 776666
Q ss_pred CCCce-----eEEeccCCcceEEEEe--CCEEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCC
Q psy5806 903 ATGRA-----KRAYAVQSHPYTLTVL--DYYVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSN 975 (1332)
Q Consensus 903 dG~~~-----~~l~~~~~~P~~la~~--~~~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~ 975 (1332)
+.... .........|.++++. +.++|.+....+.|...+..+++
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~----------------------------- 209 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPE----------------------------- 209 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTT-----------------------------
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCc-----------------------------
Confidence 53221 1112234456677665 33577776666665532211110
Q ss_pred CCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEEeecceEEEEeCCCCCCCCcccccCCccceEEEEEeCC
Q psy5806 976 NGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYS 1055 (1332)
Q Consensus 976 nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~ 1055 (1332)
.. .. +..+. ....+.+++|++.
T Consensus 210 -------------------------------~~------------~~-~~~~~--------------~~~~~~~~~~spd 231 (331)
T 3u4y_A 210 -------------------------------NI------------TL-LNAVG--------------TNNLPGTIVVSRD 231 (331)
T ss_dssp -------------------------------SC------------EE-EEEEE--------------CSSCCCCEEECTT
T ss_pred -------------------------------cc------------ce-eeecc--------------CCCCCceEEECCC
Confidence 00 00 11111 1123456778888
Q ss_pred CcEEEEEeCCCCeEEEEECCCCCCc--eeEeec------CCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEEE
Q psy5806 1056 KNLIYFADMRSGNLRTFDMSDSTRI--KPIPLM------NDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKIL 1126 (1332)
Q Consensus 1056 ~~~lY~sd~~~~~I~~~~l~~g~~~--~~i~~~------~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~~ 1126 (1332)
++.||+++...+.|..+++.++... ..+... ....+.+|++++.++.||++....+.|.++++.+.....+
T Consensus 232 g~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 232 GSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp SSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred CCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccce
Confidence 8888888877778888887644321 111111 0112245899999999999999889999999987655443
No 70
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.24 E-value=5e-10 Score=128.10 Aligned_cols=204 Identities=12% Similarity=0.079 Sum_probs=150.8
Q ss_pred cccceeEEeecCCCceEEEEecCCCceEEEecCCCCceEEEeCCCCCccceeEecCCCeEEEEeCCCCeEEEEeCCCCce
Q psy5806 737 QLKMVASVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVVNDLNRTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNA 816 (1332)
Q Consensus 737 ~~~~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~ 816 (1332)
...-+.+..+++.++.|||+|...+.|+++++++.....+.. -..|.++++|..++ ||++. .+.|.+.++++...
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~dG~-l~v~~--~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTM--DAPVSSVALRQSGG-YVATI--GTKFCALNWKEQSA 85 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC--SSCEEEEEEBTTSS-EEEEE--TTEEEEEETTTTEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeC--CCceEEEEECCCCC-EEEEE--CCeEEEEECCCCcE
Confidence 344567888999899999999999999999998765543322 25689999998776 88876 46799998875544
Q ss_pred EEEEec----CCCCCeEEEEeCCCCeEEEEecccCc------CCCCceEEEecCCCCcEEEecccccCceeEEeCCCCCe
Q psy5806 817 KVLFWL----NLYRPRSIVVHYGLGLMVWADWSRTR------LTNNRIEMAHMDGTNRAVFETEVIWPSCLAIDYSDNPK 886 (1332)
Q Consensus 817 ~~l~~~----~~~~P~~Iavdp~~g~lywtd~g~~~------~~~~~I~r~~~dG~~~~~l~~~l~~P~gl~iD~~~~~~ 886 (1332)
+.+... ....|.+|++||. |.+|+++++... ....+|.+...+|+.. .+...+..|+|++++.++ +.
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~d-G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~~~~~~~pngi~~spdg-~~ 162 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPA-GRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK-KYFDQVDISNGLDWSLDH-KI 162 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTT-SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE-EEEEEESBEEEEEECTTS-CE
T ss_pred EEEEecCCCCCCCCCCCEEECCC-CCEEEecCCcccccccccCCCcEEEEEECCCCEE-EEeeccccccceEEcCCC-CE
Confidence 444332 1245889999996 889988764320 0124688887777543 344448889999999999 89
Q ss_pred EEEEeCCCCeEEEEccC---CC--ceeEEec---cCCcceEEEEe-CCEEEEEeCCCCEEEEEECCCCeEE
Q psy5806 887 LYWVDTSKHTIEYKTLA---TG--RAKRAYA---VQSHPYTLTVL-DYYVYWTDVQHSKIYRANKYDVKDI 948 (1332)
Q Consensus 887 lYw~d~~~~~I~~~~~d---G~--~~~~l~~---~~~~P~~la~~-~~~iywtD~~~~~i~~~~~~~g~~i 948 (1332)
|||++...++|..++++ |. +++.+.. ....|.+++++ +++||.+.+..++|.++++.+|+.+
T Consensus 163 lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 163 FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRL 233 (297)
T ss_dssp EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEE
T ss_pred EEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEE
Confidence 99999999999999875 32 1233332 23679999998 5799999999999999998877544
No 71
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.24 E-value=1.8e-09 Score=125.30 Aligned_cols=212 Identities=10% Similarity=0.064 Sum_probs=148.7
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKI 1125 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~ 1125 (1332)
.+.++.|++.++.|||++...+.|++++.+++ ....+ . ....|.+|+++.. +++|++.. +.|.++++++...+.
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~-~~~~~-~-~~~~v~~i~~~~d-g~l~v~~~--~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASG-RKTVH-A-LPFMGSALAKISD-SKQLIASD--DGLFLRDTATGVLTL 123 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTT-EEEEE-E-CSSCEEEEEEEET-TEEEEEET--TEEEEEETTTCCEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCC-cEEEE-E-CCCcceEEEEeCC-CeEEEEEC--CCEEEEECCCCcEEE
Confidence 46788999999999999999999999997633 22222 2 2347899999964 66777763 458888886433333
Q ss_pred Eec-----CCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcC
Q psy5806 1126 LVN-----DLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADST 1200 (1332)
Q Consensus 1126 ~~~-----~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~ 1200 (1332)
+.. ....|+++++|| .|.||+++.+.........|++++ +|+.. .+. ..+..|++|+++++++.|||++..
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~-~~~-~~~~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA-KGKVT-KLF-ADISIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp EECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE-TTEEE-EEE-EEESSEEEEEECTTSCEEEEEETT
T ss_pred EeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe-CCcEE-Eee-CCCcccCCeEEcCCCCEEEEEECC
Confidence 322 124689999999 678888875420011246799998 66433 333 345789999999999999999999
Q ss_pred CCeEEEEecC---C-C--ceEEEEe----ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEecC
Q psy5806 1201 NKRIEYCDFF---G-R--SRKIVIS----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRSN 1270 (1332)
Q Consensus 1201 ~~~I~~~d~d---G-~--~~~~~~~----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~~ 1270 (1332)
.++|.+++++ | . +++++.. ...|.+|++ +.++.||++.+..+.|.++++ +| .....+...
T Consensus 200 ~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~------d~~G~lwva~~~~~~v~~~d~-~g---~~~~~i~~~ 269 (326)
T 2ghs_A 200 VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVC------DAEGHIWNARWGEGAVDRYDT-DG---NHIARYEVP 269 (326)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEE------CTTSCEEEEEETTTEEEEECT-TC---CEEEEEECS
T ss_pred CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEE------CCCCCEEEEEeCCCEEEEECC-CC---CEEEEEECC
Confidence 9999999985 4 2 2344433 467999999 557789999999899999998 45 444444443
Q ss_pred CCCeeeE
Q psy5806 1271 QEDFLNI 1277 (1332)
Q Consensus 1271 ~~~~~~i 1277 (1332)
...+..+
T Consensus 270 ~~~~~~~ 276 (326)
T 2ghs_A 270 GKQTTCP 276 (326)
T ss_dssp CSBEEEE
T ss_pred CCCcEEE
Confidence 3344444
No 72
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.24 E-value=2.2e-12 Score=160.24 Aligned_cols=112 Identities=24% Similarity=0.479 Sum_probs=89.4
Q ss_pred cccccCCCCC---ceecCCCCceEeCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEecCCCEEEeeeecCCCCCCC
Q psy5806 9 WVGYLQEIPQ---YKKCNRTGACIPAQWQCDNEFDCEMGEDEMKCPQASPPKKCSPDEHRCTTGHCILKTWLCDGIPDCS 85 (1332)
Q Consensus 9 ~~~~~~c~~~---~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE~~C~~~~~~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~ 85 (1332)
|...++|.-. .+.|. .+.|++..+.||+..+|.+.+++ | |...+|+|.+|.||+..|+|||..||+
T Consensus 162 ~~~~v~C~G~E~sl~~C~-~~~~~~~~h~~DagV~C~~~~~~--c--------~~~~~~~C~~~~ci~~~~~Cdg~~dC~ 230 (565)
T 2xrc_A 162 ECLHVHCRGLETSLAECT-FTKRRTMGYQDFADVVCYTQKAD--S--------PMDDFFQCVNGKYISQMKACDGINDCG 230 (565)
T ss_dssp CCBEEECCSCCSCGGGSE-EECCCCCSSCCCCEEEBCCC-------------------CBCTTSCBCCTTSTTSSSCCSS
T ss_pred eEEEeEeCCccCchhhcc-cCcccccccccCCceeccccccC--C--------CCcCeeECCCCCccCHHHcCCCcccCC
Confidence 4456777655 47787 55688889999999999876543 4 345679999999999999999999999
Q ss_pred CCCCcccccccCCCCCccccCCCCCCCCcccCCCccCCCCceecCCCceecCCccccCCCCCCCCCCCCCCCcCCc
Q psy5806 86 LGEDERNCNKTCDAQKEFSCMKLAEPRPTEVGSNIKYFPLHTVRAPRKDCFSKKYLCDGKKHCPRGEEGPDERHCP 161 (1332)
Q Consensus 86 DgsDE~~C~~~C~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ci~~~~~Cdg~~dC~dg~de~d~~~C~ 161 (1332)
|+|||.+|.. |.+. +|+|.+ + .|++..++|||..||.||+|| ..|.
T Consensus 231 d~sDE~~C~~-c~~~-~~~C~~------------------------~-~C~~~~~~cdG~~dC~~gsDE---~~C~ 276 (565)
T 2xrc_A 231 DQSDELCCKA-CQGK-GFHCKS------------------------G-VCIPSQYQCNGEVDCITGEDE---VGCA 276 (565)
T ss_dssp SSSSSSSBSS-CSSS-CEEETT------------------------T-EEECGGGTTSSSCCSSSCTTS---SSCC
T ss_pred CCcccccccc-cCCC-ceecCC------------------------C-cccCccccCCCcccCCCCccc---cCcC
Confidence 9999999976 9887 899976 3 499999999999999999998 5675
No 73
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.23 E-value=5.9e-10 Score=130.38 Aligned_cols=215 Identities=9% Similarity=0.027 Sum_probs=145.6
Q ss_pred cceEEEEEeCCCcEEEEEeCC--CC--eEEEEECCCCCCceeE------eecCCCCceeeEEEecCCeEEEEcCC-----
Q psy5806 1045 MSSIFFDYHYSKNLIYFADMR--SG--NLRTFDMSDSTRIKPI------PLMNDTIRDNFVIDWVANNIYYIDSQ----- 1109 (1332)
Q Consensus 1045 ~~~~~id~d~~~~~lY~sd~~--~~--~I~~~~l~~g~~~~~i------~~~~~~~p~glAvDw~~~~LY~td~~----- 1109 (1332)
..|.+|++++. +++|++... .+ +|..++ + |... .+ ....+..|.||++|.. ++|||+|..
T Consensus 17 ~~p~~va~~~~-g~~~v~~~~~~~~~~~l~~~~-~-g~~~-~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D~g~~~~~ 91 (343)
T 2qe8_A 17 LAPGNITLTPD-GRLFLSLHQFYQPEMQVAELT-Q-DGLI-PFPPQSGNAIITFDTVLGIKSDGN-GIVWMLDNGNQSKS 91 (343)
T ss_dssp SCEEEEEECTT-SCEEEEECGGGCCSCSEEEEE-T-TEEE-ESCCCCSSCCCCCSCEEEEEECSS-SEEEEEECHHHHTS
T ss_pred CCcceEEECCC-CCEEEEeCCCCCCceEEEEEC-C-CCee-cCCCcccCcccceeEeeEEEEcCC-CcEEEEcCCCCcCC
Confidence 35889999976 468998642 23 788777 3 4211 00 1123568999999964 789999976
Q ss_pred CceEEEEeeC-CceEEEEe--c----CCCCceEEEEcCCCcEEEEEec---CCCCCCCCCcEEEEecCCCceEEEEec--
Q psy5806 1110 MHTINVARSD-GQHKKILV--N----DLMEPLAIAVYPRRGLLFYSHW---GLYDNSPTTKIEKVYLDGSYRTVLVEE-- 1177 (1332)
Q Consensus 1110 ~~~I~v~~ld-G~~~~~~~--~----~~~~P~~iavdp~~g~Lywtd~---~~~~~~~~~~I~r~~ldG~~~~~l~~~-- 1177 (1332)
..+|.+++++ |+....+. . ....|.+|+|||..|++|+++. +. ..|.+.+++......++..
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~------~~i~v~d~~~g~~~r~~~~~~ 165 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDK------AALIRVDLQTGLAARVLQGYP 165 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGG------CEEEEEETTTCCEEEECTTCT
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCC------CeEEEEECCCCCEEEEecCCC
Confidence 4789999987 55343322 1 1246899999998899999997 43 5788888753332222210
Q ss_pred ------------C---------------CCCcceEEEecCCCEEEEEEcCCCeEEEEecC----CC--ce------EEEE
Q psy5806 1178 ------------D---------------LAFPNELAIDFKQRRLFWADSTNKRIEYCDFF----GR--SR------KIVI 1218 (1332)
Q Consensus 1178 ------------~---------------l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~d----G~--~~------~~~~ 1218 (1332)
+ ...|+||+++++++.||+++...++|++++.+ +. .+ ..+-
T Consensus 166 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g 245 (343)
T 2qe8_A 166 GIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS 245 (343)
T ss_dssp TTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE
T ss_pred cccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc
Confidence 0 02479999999999999999998899999863 21 11 1111
Q ss_pred eecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEecC-CCCeeeEEE
Q psy5806 1219 SKVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRSN-QEDFLNIKA 1279 (1332)
Q Consensus 1219 ~~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~~-~~~~~~i~~ 1279 (1332)
....|.||++ +.++.||++++..++|.+++..+| .-.++.... ...|.+|.+
T Consensus 246 ~~g~pdgia~------d~~G~l~va~~~~~~V~~~d~~~G---~~~~~~~~~~~~~p~~va~ 298 (343)
T 2qe8_A 246 EKPICDGISI------DKDHNIYVGDLAHSAIGVITSADR---AYKLLVTDEKLSWTDSFNF 298 (343)
T ss_dssp ECCSCSCEEE------CTTCCEEEEEGGGTEEEEEETTTT---EEEEEEECGGGSCEEEEEE
T ss_pred cCCCCceEEE------CCCCCEEEEccCCCeEEEEECCCC---CEEEEEECCceecCCeeEE
Confidence 2458999999 457899999999999999998556 322333222 455666643
No 74
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.23 E-value=1.9e-09 Score=119.82 Aligned_cols=194 Identities=7% Similarity=-0.078 Sum_probs=141.0
Q ss_pred ceEEEEEeCCCcEEEEEeC--CCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-Cce
Q psy5806 1046 SSIFFDYHYSKNLIYFADM--RSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQH 1122 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~--~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~ 1122 (1332)
.+.||+|++. ++||++.. ..+.|+.+++.+|.-...+.......++|++++ ++.||+++...+.+.+++.+ ++.
T Consensus 22 f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 22 FTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred CcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence 4689999976 69999975 367999999886554444432223356778887 89999999999999999987 343
Q ss_pred EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEec-----CCCCcceEEEecCCCEEEEE
Q psy5806 1123 KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEE-----DLAFPNELAIDFKQRRLFWA 1197 (1332)
Q Consensus 1123 ~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~-----~l~~p~glaiD~~~~~LY~~ 1197 (1332)
...+..+ .|.++.+.+..++||.++ +. ++|..++........-+.. .+..|++|.+. +++||.+
T Consensus 99 ~~~i~~g--~~~g~glt~Dg~~l~vs~-gs------~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn 167 (266)
T 2iwa_A 99 IKNFTHQ--MKDGWGLATDGKILYGSD-GT------SILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWAN 167 (266)
T ss_dssp EEEEECC--SSSCCEEEECSSSEEEEC-SS------SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEE
T ss_pred EEEEECC--CCCeEEEEECCCEEEEEC-CC------CeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEe
Confidence 3335433 355555666577999998 44 6899998877554333332 23468899887 5699999
Q ss_pred EcCCCeEEEEecCCCceEEEEe---e------------cccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1198 DSTNKRIEYCDFFGRSRKIVIS---K------------VAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1198 d~~~~~I~~~d~dG~~~~~~~~---~------------~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
....+.|.++|.........+. . ..|.|||+ ++.+++||+|....++|+.++....
T Consensus 168 ~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~-----~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 168 IWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAW-----DQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp ETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEE-----ETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred cCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEE-----cCCCCEEEEECCCCCeEEEEEEecc
Confidence 9889999999997544333333 1 36789999 5567899999999999999987543
No 75
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.23 E-value=4.4e-10 Score=130.40 Aligned_cols=204 Identities=11% Similarity=0.083 Sum_probs=141.6
Q ss_pred cCCc-cceEEEEEeCCCcEEEEEe------------CCCCeEEEEECCCCCCc-eeEeecC------CCCceeeEEEec-
Q psy5806 1041 FPEY-MSSIFFDYHYSKNLIYFAD------------MRSGNLRTFDMSDSTRI-KPIPLMN------DTIRDNFVIDWV- 1099 (1332)
Q Consensus 1041 i~~~-~~~~~id~d~~~~~lY~sd------------~~~~~I~~~~l~~g~~~-~~i~~~~------~~~p~glAvDw~- 1099 (1332)
|+++ ..+.+|++++ ++.+|.+. ...|.|++++++..+.. +.+...+ ..+|.||.+...
T Consensus 45 i~~~~~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~ 123 (355)
T 3sre_A 45 VKGIDNGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDD 123 (355)
T ss_dssp CTTCCSCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECT
T ss_pred eCCCCCCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECC
Confidence 4442 4577888877 57888886 25788999998732222 2222223 248999999652
Q ss_pred --CCeEEEEcCC--CceEEEEeeC--CceEEEEe----cCCCCceEEEEcCCCcEEEEEecCCCC-----------CCCC
Q psy5806 1100 --ANNIYYIDSQ--MHTINVARSD--GQHKKILV----NDLMEPLAIAVYPRRGLLFYSHWGLYD-----------NSPT 1158 (1332)
Q Consensus 1100 --~~~LY~td~~--~~~I~v~~ld--G~~~~~~~----~~~~~P~~iavdp~~g~Lywtd~~~~~-----------~~~~ 1158 (1332)
+.+||+++.. ..+|++++++ +.....+. ..+..|+++++++ .|.+|+++..-+. ..+.
T Consensus 124 dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~ 202 (355)
T 3sre_A 124 DNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAW 202 (355)
T ss_dssp TCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCC
T ss_pred CCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCc
Confidence 3369999877 5688888876 33333232 2567899999999 7888888742111 1235
Q ss_pred CcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCC--C--ceEEEEe-ecccceEEEecCCc
Q psy5806 1159 TKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFG--R--SRKIVIS-KVAPYGLSVRQSPG 1233 (1332)
Q Consensus 1159 ~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG--~--~~~~~~~-~~~P~glav~~~~~ 1233 (1332)
++|+|++.. ..+++ ..++..||||+++++++.||++|+..++|+++++++ + +++++ . ...|.||++
T Consensus 203 g~vyr~d~~--~~~~~-~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~v----- 273 (355)
T 3sre_A 203 SFVTYYSPN--DVRVV-AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISV----- 273 (355)
T ss_dssp EEEEEECTT--CCEEE-EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEE-----
T ss_pred cEEEEEECC--eEEEe-ecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEE-----
Confidence 789998773 34443 457899999999999999999999999999999974 3 23344 5 788999999
Q ss_pred ccc-ccEEEEEE-CCCCEEEEEEec
Q psy5806 1234 KAF-IVELYWTD-WEAMSVVIAREK 1256 (1332)
Q Consensus 1234 ~~~-~~~lYwtd-~~~~~V~~~~~~ 1256 (1332)
|. +|.||++. |...+|.++++.
T Consensus 274 -D~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 274 -DPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp -CTTTCCEEEEEESCHHHHHSCCTT
T ss_pred -eCCCCcEEEEecCCceEEEEECCC
Confidence 44 48999955 665566655544
No 76
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.21 E-value=5.2e-12 Score=156.84 Aligned_cols=72 Identities=33% Similarity=0.738 Sum_probs=64.8
Q ss_pred CCceecCCCCceEeCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEecCCCEEEeeeecCCCCCCCCCCCcccccc
Q psy5806 17 PQYKKCNRTGACIPAQWQCDNEFDCEMGEDEMKCPQASPPKKCSPDEHRCTTGHCILKTWLCDGIPDCSLGEDERNCNK 95 (1332)
Q Consensus 17 ~~~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE~~C~~~~~~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~C~~ 95 (1332)
..+|+|. ++.||+..|+|||..||.|||||.+|. .|.+.+|+|.++.||+..++|||..||.|||||.+|..
T Consensus 206 ~~~~~C~-~~~ci~~~~~Cdg~~dC~d~sDE~~C~------~c~~~~~~C~~~~C~~~~~~cdG~~dC~~gsDE~~C~~ 277 (565)
T 2xrc_A 206 DDFFQCV-NGKYISQMKACDGINDCGDQSDELCCK------ACQGKGFHCKSGVCIPSQYQCNGEVDCITGEDEVGCAG 277 (565)
T ss_dssp ---CBCT-TSCBCCTTSTTSSSCCSSSSSSSSSBS------SCSSSCEEETTTEEECGGGTTSSSCCSSSCTTSSSCC-
T ss_pred cCeeECC-CCCccCHHHcCCCcccCCCCccccccc------ccCCCceecCCCcccCccccCCCcccCCCCccccCcCC
Confidence 4459998 899999999999999999999999992 39999999999999999999999999999999988854
No 77
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.21 E-value=4e-09 Score=122.90 Aligned_cols=203 Identities=10% Similarity=0.067 Sum_probs=142.3
Q ss_pred ccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEee---cC--------CCCceeeEEEecCCeEEEEcCCCce
Q psy5806 1044 YMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPL---MN--------DTIRDNFVIDWVANNIYYIDSQMHT 1112 (1332)
Q Consensus 1044 ~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~---~~--------~~~p~glAvDw~~~~LY~td~~~~~ 1112 (1332)
...|.++++++.++.||+++...+.|..++++.......+.. .+ ...|.++++++.++ ||+++...+.
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~ 163 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDK 163 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCE
Confidence 346789999999999999998888898888752222222211 11 12477899998888 9999999999
Q ss_pred EEEEeeC--CceEEE--Ee-cCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCC--CceEEE--EecCC----
Q psy5806 1113 INVARSD--GQHKKI--LV-NDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDG--SYRTVL--VEEDL---- 1179 (1332)
Q Consensus 1113 I~v~~ld--G~~~~~--~~-~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG--~~~~~l--~~~~l---- 1179 (1332)
|.+++++ |+.... +. .....|++++++|...+||+++... ..|...+++. .....+ +....
T Consensus 164 v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~------~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 237 (347)
T 3hfq_A 164 VYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS------SQIASLKYDTQTGAFTQLGIVKTIPADYT 237 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT------TEEEEEEEETTTTEEEEEEEEESSCTTCC
T ss_pred EEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC------CEEEEEEecCCCCceEEeeeeeecCCCCC
Confidence 9999997 433322 11 2234799999999777799998665 5666666653 222221 11111
Q ss_pred --CCcceEEEecCCCEEEEEEcCCCeEEEEecCCC-ceEEEEe----ecccceEEEecCCccccccEEEEEECCCCEEEE
Q psy5806 1180 --AFPNELAIDFKQRRLFWADSTNKRIEYCDFFGR-SRKIVIS----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVI 1252 (1332)
Q Consensus 1180 --~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~-~~~~~~~----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~ 1252 (1332)
..|.+++++++++.||+++...+.|..++++.. ..+.+.. ...|.+|++ ++++.+||+++...+.|..
T Consensus 238 ~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~-----spdg~~l~v~~~~~~~v~v 312 (347)
T 3hfq_A 238 AHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDL-----DPTEAFVVVVNQNTDNATL 312 (347)
T ss_dssp SCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEE-----CTTSSEEEEEETTTTEEEE
T ss_pred CCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEE-----CCCCCEEEEEEcCCCcEEE
Confidence 347789999999999999998999999988622 2222222 457999999 5567789999998888776
Q ss_pred E--EecCC
Q psy5806 1253 A--REKSD 1258 (1332)
Q Consensus 1253 ~--~~~~g 1258 (1332)
+ +..+|
T Consensus 313 ~~~d~~tg 320 (347)
T 3hfq_A 313 YARDLTSG 320 (347)
T ss_dssp EEECTTTC
T ss_pred EEEeCCCC
Confidence 6 54555
No 78
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.21 E-value=2.9e-09 Score=122.12 Aligned_cols=245 Identities=11% Similarity=0.039 Sum_probs=162.8
Q ss_pred CCCCcEEEecccccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEeccCCcceEEEEe-CCEEEEEeCCCCEEE
Q psy5806 860 DGTNRAVFETEVIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYAVQSHPYTLTVL-DYYVYWTDVQHSKIY 938 (1332)
Q Consensus 860 dG~~~~~l~~~l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~~~~~P~~la~~-~~~iywtD~~~~~i~ 938 (1332)
.+...+.+.....++.|.+.|.++ +.|||+|...+.|.+.+.+|. .+.+......|.++++. ++.||+++...+.|.
T Consensus 33 ~~~~~~~l~~~~~~~egp~~~~~g-~~l~~~d~~~~~i~~~~~~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~ 110 (305)
T 3dr2_A 33 GDARLLTLYDQATWSEGPAWWEAQ-RTLVWSDLVGRRVLGWREDGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAIT 110 (305)
T ss_dssp TTCCCEEEECCCSSEEEEEEEGGG-TEEEEEETTTTEEEEEETTSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCCceEEEecCCcCccCCeEeCCC-CEEEEEECCCCEEEEEeCCCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEE
Confidence 455556677778899999999998 889999999999999998765 44454556778999988 568888888878887
Q ss_pred EEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEE
Q psy5806 939 RANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYT 1018 (1332)
Q Consensus 939 ~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~ 1018 (1332)
+.++. |+... +...
T Consensus 111 ~~~~~-g~~~~----------~~~~------------------------------------------------------- 124 (305)
T 3dr2_A 111 RSDAD-GQAHL----------LVGR------------------------------------------------------- 124 (305)
T ss_dssp EECTT-SCEEE----------EECE-------------------------------------------------------
T ss_pred EECCC-CCEEE----------EEec-------------------------------------------------------
Confidence 76543 31000 0000
Q ss_pred eecceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeC-----------------CCCeEEEEECCCCCCce
Q psy5806 1019 SRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADM-----------------RSGNLRTFDMSDSTRIK 1081 (1332)
Q Consensus 1019 ~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~-----------------~~~~I~~~~l~~g~~~~ 1081 (1332)
... .....+.++++++. ++||++|. ..+.|++++..+|.. .
T Consensus 125 -~~~-------------------~~~~~~~~i~~d~d-G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~-~ 182 (305)
T 3dr2_A 125 -YAG-------------------KRLNSPNDLIVARD-GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL-Q 182 (305)
T ss_dssp -ETT-------------------EECSCCCCEEECTT-SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC-E
T ss_pred -cCC-------------------CccCCCCCEEECCC-CCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE-E
Confidence 000 00011223334432 23555432 124566666542322 2
Q ss_pred eEeecCCCCceeeEEEecCCeEEEEcCCC-----ceEEEEeeCCce---EEEE-ecCCCCceEEEEcCCCcEEEEEecCC
Q psy5806 1082 PIPLMNDTIRDNFVIDWVANNIYYIDSQM-----HTINVARSDGQH---KKIL-VNDLMEPLAIAVYPRRGLLFYSHWGL 1152 (1332)
Q Consensus 1082 ~i~~~~~~~p~glAvDw~~~~LY~td~~~-----~~I~v~~ldG~~---~~~~-~~~~~~P~~iavdp~~g~Lywtd~~~ 1152 (1332)
.+. ....|.|||++..++.|||++... ++|.++++++.. ..++ ......|.+|++|+ .|.||.+..+
T Consensus 183 ~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~-~G~lwv~~~~- 258 (305)
T 3dr2_A 183 RMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDR-GGWLWSSSGT- 258 (305)
T ss_dssp EEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECT-TSCEEECCSS-
T ss_pred EEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECC-CCCEEEecCC-
Confidence 222 566899999999999999999873 789999987532 2222 22345799999998 6778888733
Q ss_pred CCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEec
Q psy5806 1153 YDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDF 1209 (1332)
Q Consensus 1153 ~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~ 1209 (1332)
.|.+.+.+|.....+-.. ..|..+++++++++||++.. +.|.++++
T Consensus 259 -------gv~~~~~~g~~~~~~~~~--~~~~~~~f~~d~~~L~it~~--~~l~~~~~ 304 (305)
T 3dr2_A 259 -------GVCVFDSDGQLLGHIPTP--GTASNCTFDQAQQRLFITGG--PCLWMLPL 304 (305)
T ss_dssp -------EEEEECTTSCEEEEEECS--SCCCEEEECTTSCEEEEEET--TEEEEEEC
T ss_pred -------cEEEECCCCCEEEEEECC--CceeEEEEeCCCCEEEEEcC--CeEEEEEC
Confidence 499999998766555432 25889999988889999865 47877764
No 79
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.20 E-value=3.3e-09 Score=122.40 Aligned_cols=218 Identities=11% Similarity=-0.008 Sum_probs=156.2
Q ss_pred EEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCcee-eEEEecCCe
Q psy5806 1024 IRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDN-FVIDWVANN 1102 (1332)
Q Consensus 1024 i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~g-lAvDw~~~~ 1102 (1332)
|+.++++...... ..+. +..++ ++++++.++.||+++...+.|+.+++.++....... .....|.. +++++.++.
T Consensus 22 v~~~d~~~~~~~~-~~~~-~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~ 97 (331)
T 3u4y_A 22 ISFFSTDTLEILN-QITL-GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI-QEGQSSMADVDITPDDQF 97 (331)
T ss_dssp EEEEETTTCCEEE-EEEC-CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE-EECSSCCCCEEECTTSSE
T ss_pred EEEEeCcccceee-eEEc-cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec-ccCCCCccceEECCCCCE
Confidence 7777765433211 1222 34456 999999999999999888999999987554312222 33456777 999999999
Q ss_pred EEEEcCCCc--eEEEEeeCCceE-EEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCc-EEEEecCCCceE-----E
Q psy5806 1103 IYYIDSQMH--TINVARSDGQHK-KILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTK-IEKVYLDGSYRT-----V 1173 (1332)
Q Consensus 1103 LY~td~~~~--~I~v~~ldG~~~-~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~-I~r~~ldG~~~~-----~ 1173 (1332)
||.++...+ .|.+++++.... ..+. ....|.+++++|...+||+++.+. .. |...+++..... .
T Consensus 98 l~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~------~~~i~~~~~~~~g~~~~~~~~ 170 (331)
T 3u4y_A 98 AVTVTGLNHPFNMQSYSFLKNKFISTIP-IPYDAVGIAISPNGNGLILIDRSS------ANTVRRFKIDADGVLFDTGQE 170 (331)
T ss_dssp EEECCCSSSSCEEEEEETTTTEEEEEEE-CCTTEEEEEECTTSSCEEEEEETT------TTEEEEEEECTTCCEEEEEEE
T ss_pred EEEecCCCCcccEEEEECCCCCeEEEEE-CCCCccceEECCCCCEEEEEecCC------CceEEEEEECCCCcEeecCCc
Confidence 995444334 899999975443 3343 336799999999777899998765 44 555555432221 1
Q ss_pred EEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCce---EEEEe-ecccceEEEecCCccccccEEEEEECCCCE
Q psy5806 1174 LVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSR---KIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMS 1249 (1332)
Q Consensus 1174 l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~---~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~ 1249 (1332)
.+. .-..|.++++++++++||++....+.|..+|++.... ...+. ...|.+|++ ++.+.+||+++...+.
T Consensus 171 ~~~-~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~-----spdg~~l~v~~~~~~~ 244 (331)
T 3u4y_A 171 FIS-GGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVV-----SRDGSTVYVLTESTVD 244 (331)
T ss_dssp EEC-SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEE-----CTTSSEEEEECSSEEE
T ss_pred ccc-CCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEE-----CCCCCEEEEEEcCCCE
Confidence 222 2356999999999999999999999999999974433 22333 788999999 4567789999998899
Q ss_pred EEEEEecCC
Q psy5806 1250 VVIAREKSD 1258 (1332)
Q Consensus 1250 V~~~~~~~g 1258 (1332)
|..++..++
T Consensus 245 i~~~d~~~~ 253 (331)
T 3u4y_A 245 VFNFNQLSG 253 (331)
T ss_dssp EEEEETTTT
T ss_pred EEEEECCCC
Confidence 999998877
No 80
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=99.19 E-value=1.7e-12 Score=135.53 Aligned_cols=79 Identities=20% Similarity=0.280 Sum_probs=64.5
Q ss_pred cCCCCCceecC-CCCceEeCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEecCCCEEEeeeecCCCCCCCCCCCcc
Q psy5806 13 LQEIPQYKKCN-RTGACIPAQWQCDNEFDCEMGEDEMKCPQASPPKKCSPDEHRCTTGHCILKTWLCDGIPDCSLGEDER 91 (1332)
Q Consensus 13 ~~c~~~~f~C~-~~~~Ci~~~~~CDg~~DC~dgsDE~~C~~~~~~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~ 91 (1332)
..|.+.+|+|. .+|+|||..|+|||..||.|||||.+| ....|.+.+|+|. + ++ ..|.+.+||.
T Consensus 53 ~~C~~~~F~C~~~~g~CIp~~~~CDG~~DC~DgSDE~~C----~~~~C~~~~F~c~-----~-----~~-~~C~~~~~~~ 117 (215)
T 2gtl_O 53 PSCDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDC----TLPTKAGDKFIGD-----V-----CF-DHCTKRRPEH 117 (215)
T ss_dssp CSSCTTEEECCSSSCCEEEGGGTTSSSCCSSSCHHHHCC----CCSSCTTCEEEEE-----E-----EE-ESSCSSCCSE
T ss_pred CCCCCcceeeCCCCCcCccccccCCCCCcCCCcccccCC----CCCCcCCCceeee-----E-----CC-CcccCCCCCC
Confidence 46999999994 389999999999999999999999999 4568999999983 2 22 3488899999
Q ss_pred cccccCCC--CCccccCC
Q psy5806 92 NCNKTCDA--QKEFSCMK 107 (1332)
Q Consensus 92 ~C~~~C~~--~~~~~C~~ 107 (1332)
.|...|.. . +|+|..
T Consensus 118 ~c~~~~s~~~~-~~fc~~ 134 (215)
T 2gtl_O 118 MTLAFESSSIA-AFFTPI 134 (215)
T ss_dssp EEEEEEEEEEC-TTCTTE
T ss_pred ceeeeeccccc-cccCCC
Confidence 88766653 3 688876
No 81
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.18 E-value=9.3e-08 Score=113.01 Aligned_cols=205 Identities=13% Similarity=0.090 Sum_probs=158.3
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCc-eEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQ-HKK 1124 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~-~~~ 1124 (1332)
.+.+++|++.+++||++....+.|+.+++.++.....+ .....+.+++++..++.||++....+.|.++++... ...
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV--KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN 152 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE--ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEE--eCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 46788999999999999888899999998744332222 234578999999989999999988899999998744 333
Q ss_pred EEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEc--CCC
Q psy5806 1125 ILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADS--TNK 1202 (1332)
Q Consensus 1125 ~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~--~~~ 1202 (1332)
.+.. ...|..++++|...+||++.... +.|...++........+.. -..|.++++++++++||.+.. ..+
T Consensus 153 ~~~~-~~~~~~~~~~~dg~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~ 224 (391)
T 1l0q_A 153 TVSV-GRSPKGIAVTPDGTKVYVANFDS------MSISVIDTVTNSVIDTVKV-EAAPSGIAVNPEGTKAYVTNVDKYFN 224 (391)
T ss_dssp EEEC-CSSEEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEEC-SSEEEEEEECTTSSEEEEEEECSSCC
T ss_pred EEec-CCCcceEEECCCCCEEEEEeCCC------CEEEEEECCCCeEEEEEec-CCCccceEECCCCCEEEEEecCcCCC
Confidence 3433 36789999999888899887654 6799999877665555543 356889999999999999986 678
Q ss_pred eEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEe
Q psy5806 1203 RIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIR 1268 (1332)
Q Consensus 1203 ~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~ 1268 (1332)
.|...|+........+. ...|.++++ ++.+.+||++....+.|...+..++ .....+.
T Consensus 225 ~v~~~d~~~~~~~~~~~~~~~~~~~~~-----s~dg~~l~~s~~~d~~v~v~d~~~~---~~~~~~~ 283 (391)
T 1l0q_A 225 TVSMIDTGTNKITARIPVGPDPAGIAV-----TPDGKKVYVALSFXNTVSVIDTATN---TITATMA 283 (391)
T ss_dssp EEEEEETTTTEEEEEEECCSSEEEEEE-----CTTSSEEEEEETTTTEEEEEETTTT---EEEEEEE
T ss_pred cEEEEECCCCeEEEEEecCCCccEEEE-----ccCCCEEEEEcCCCCEEEEEECCCC---cEEEEEE
Confidence 99999997554444444 667888988 4457789999999999999999887 5544443
No 82
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.18 E-value=7.2e-10 Score=130.06 Aligned_cols=212 Identities=11% Similarity=0.109 Sum_probs=143.1
Q ss_pred CccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeE------eecCCCCceeeEEEec---CCeEEEEcCC----
Q psy5806 1043 EYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPI------PLMNDTIRDNFVIDWV---ANNIYYIDSQ---- 1109 (1332)
Q Consensus 1043 ~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i------~~~~~~~p~glAvDw~---~~~LY~td~~---- 1109 (1332)
++..|.+|++++.+++||+++. .++|++++.+ |...+.+ ...+.+.|.|||+++. ++.||+++..
T Consensus 16 ~l~~P~~i~~~pdG~~l~V~e~-~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~ 93 (353)
T 2g8s_A 16 KLDHPWALAFLPDNHGMLITLR-GGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD 93 (353)
T ss_dssp EESSEEEEEECSTTCCEEEEET-TTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS
T ss_pred CCCCcEEEEEcCCCCEEEEEeC-CceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC
Confidence 4667999999997654999995 5899999843 4322211 1234457899999985 8999999754
Q ss_pred ---CceEEEEeeCCc-----eEEEEecC-------CCCceEEEEcCCCcEEEEEecCCCC-------CCCCCcEEEEecC
Q psy5806 1110 ---MHTINVARSDGQ-----HKKILVND-------LMEPLAIAVYPRRGLLFYSHWGLYD-------NSPTTKIEKVYLD 1167 (1332)
Q Consensus 1110 ---~~~I~v~~ldG~-----~~~~~~~~-------~~~P~~iavdp~~g~Lywtd~~~~~-------~~~~~~I~r~~ld 1167 (1332)
.++|.++++++. ..+++... ...|.+|+++| .|+||++...... +...++|.|++.|
T Consensus 94 g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~d 172 (353)
T 2g8s_A 94 GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQ 172 (353)
T ss_dssp SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETT
T ss_pred CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCC
Confidence 457877777642 23333222 23488999999 7899999733200 1224689999999
Q ss_pred CCc------------eEEEEecCCCCcceEEEecCCCEEEEEEcCCC---eEEEEecCCCc-------------------
Q psy5806 1168 GSY------------RTVLVEEDLAFPNELAIDFKQRRLFWADSTNK---RIEYCDFFGRS------------------- 1213 (1332)
Q Consensus 1168 G~~------------~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~---~I~~~d~dG~~------------------- 1213 (1332)
|+. ...++..++..|.||++|+++++||++|...+ +|.++.. |.+
T Consensus 173 G~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~-G~nyGwp~~~~~~~~~~~~~~~ 251 (353)
T 2g8s_A 173 GEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQK-GKNYGWPLATWGINYSGFKIPE 251 (353)
T ss_dssp SCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCT-TCBCCTTTBCSSBCTTSSCCTT
T ss_pred CCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEecc-CCcCCCCCccCCCCCCCCccCc
Confidence 972 23355567888999999998899999998754 4544322 211
Q ss_pred ---------eE--EEEe-ecccceEEEec-CCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1214 ---------RK--IVIS-KVAPYGLSVRQ-SPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1214 ---------~~--~~~~-~~~P~glav~~-~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.. .... ...|.||++.. .---++++.||++++..++|.+++..++
T Consensus 252 ~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~ 309 (353)
T 2g8s_A 252 AKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGD 309 (353)
T ss_dssp CCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETT
T ss_pred ccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCC
Confidence 00 0011 34688999910 0000246899999999999999998865
No 83
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.16 E-value=1.7e-09 Score=128.92 Aligned_cols=232 Identities=13% Similarity=-0.010 Sum_probs=148.6
Q ss_pred EEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeC---------CCCeEEEEECCCCCCceeEeec------CC
Q psy5806 1024 IRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADM---------RSGNLRTFDMSDSTRIKPIPLM------ND 1088 (1332)
Q Consensus 1024 i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~---------~~~~I~~~~l~~g~~~~~i~~~------~~ 1088 (1332)
|..|+++ ...++..|+....| +|++++.+++||+++. ..+.|..+++.++.....+... ..
T Consensus 101 VsVID~~---t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 101 QFVIDGS---TGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEETT---TTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred EEEEECC---CCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 5556554 33444455545568 9999999999999985 3568999997754444334321 02
Q ss_pred CCceeeEEEecCCeEEEEcCC-CceEEEEeeCCce-EEEEecC---CCCceE----EEEcCCCcEEEEEecCC-------
Q psy5806 1089 TIRDNFVIDWVANNIYYIDSQ-MHTINVARSDGQH-KKILVND---LMEPLA----IAVYPRRGLLFYSHWGL------- 1152 (1332)
Q Consensus 1089 ~~p~glAvDw~~~~LY~td~~-~~~I~v~~ldG~~-~~~~~~~---~~~P~~----iavdp~~g~Lywtd~~~------- 1152 (1332)
..|.+++++..++.||+++.. .+.|.++|+.... ...+..+ ...|.+ +++.+....+|++....
T Consensus 177 ~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~ 256 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT 256 (426)
T ss_dssp CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC
T ss_pred CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee
Confidence 479999999999999999875 6789999997443 2223221 112223 56665333333332110
Q ss_pred --CC------------C---------CCCCcEEEEecCCCceEEEEecCC---------CCcce---EEEecCCCEEEEE
Q psy5806 1153 --YD------------N---------SPTTKIEKVYLDGSYRTVLVEEDL---------AFPNE---LAIDFKQRRLFWA 1197 (1332)
Q Consensus 1153 --~~------------~---------~~~~~I~r~~ldG~~~~~l~~~~l---------~~p~g---laiD~~~~~LY~~ 1197 (1332)
+. . ...++|+.+++.+....++-.-.+ ..|.| +++++++++||++
T Consensus 257 ~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa 336 (426)
T 3c75_H 257 EVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLL 336 (426)
T ss_dssp CCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEE
T ss_pred eeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEE
Confidence 00 0 001235555554433322111000 12555 8999999999999
Q ss_pred EcC---------CCeEEEEecCCCceEEEEe-ecccceEEEecCCcccccc-EEEEEECCCCEEEEEEecCCCCcceEEE
Q psy5806 1198 DST---------NKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIV-ELYWTDWEAMSVVIAREKSDTGQWDVHL 1266 (1332)
Q Consensus 1198 d~~---------~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~-~lYwtd~~~~~V~~~~~~~g~~~~~~~~ 1266 (1332)
+.. .+.|..+|.....+..-+. +..|.+|++ ++++. +||.+++.++.|..+|..++ +.+..
T Consensus 337 ~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~-----spDg~~~lyv~n~~s~~VsVID~~t~---kvv~t 408 (426)
T 3c75_H 337 VDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINV-----SQDAEPLLYALSAGTQTLHIYDAATG---EELRS 408 (426)
T ss_dssp EEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEE-----CCSSSCEEEEEETTTTEEEEEETTTC---CEEEE
T ss_pred ecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEE-----ccCCCEEEEEEcCCCCeEEEEECCCC---CEEEE
Confidence 752 4579999997655444445 678999999 55577 89999999999999999888 65555
Q ss_pred E
Q psy5806 1267 I 1267 (1332)
Q Consensus 1267 ~ 1267 (1332)
+
T Consensus 409 I 409 (426)
T 3c75_H 409 V 409 (426)
T ss_dssp E
T ss_pred e
Confidence 4
No 84
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.14 E-value=1.6e-08 Score=119.58 Aligned_cols=225 Identities=16% Similarity=0.162 Sum_probs=168.9
Q ss_pred EEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeE
Q psy5806 1024 IRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNI 1103 (1332)
Q Consensus 1024 i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~L 1103 (1332)
|+..+++... ....+.....+.+++|++.++.||++....+.|+.+++.++.....+. ....+.++++++.++.|
T Consensus 14 v~v~d~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~--~~~~v~~~~~spdg~~l 88 (391)
T 1l0q_A 14 ISVIDVTSNK---VTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP--AGSSPQGVAVSPDGKQV 88 (391)
T ss_dssp EEEEETTTTE---EEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEE
T ss_pred EEEEECCCCe---EEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE--CCCCccceEECCCCCEE
Confidence 7777665332 222334445688999999999999998888999999987544333332 23488999999999999
Q ss_pred EEEcCCCceEEEEeeCCceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcc
Q psy5806 1104 YYIDSQMHTINVARSDGQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPN 1183 (1332)
Q Consensus 1104 Y~td~~~~~I~v~~ldG~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~ 1183 (1332)
|++....+.|.++++..............|.+++++|...+||++.... +.|...++........+... ..|.
T Consensus 89 ~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~-~~~~ 161 (391)
T 1l0q_A 89 YVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGD------KTVSVINTVTKAVINTVSVG-RSPK 161 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECC-SSEE
T ss_pred EEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCC------CEEEEEECCCCcEEEEEecC-CCcc
Confidence 9999888899999998544433223346799999999888899998655 68999998766555555433 6689
Q ss_pred eEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEEC--CCCEEEEEEecCCCC
Q psy5806 1184 ELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDW--EAMSVVIAREKSDTG 1260 (1332)
Q Consensus 1184 glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~--~~~~V~~~~~~~g~~ 1260 (1332)
+++++++++.||++....+.|...|+........+. ...|.++++ .+.+.+||.+.. ..+.|...+..++
T Consensus 162 ~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~-----~~~g~~l~~~~~~~~~~~v~~~d~~~~-- 234 (391)
T 1l0q_A 162 GIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAV-----NPEGTKAYVTNVDKYFNTVSMIDTGTN-- 234 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEE-----CTTSSEEEEEEECSSCCEEEEEETTTT--
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEE-----CCCCCEEEEEecCcCCCcEEEEECCCC--
Confidence 999999999999999889999999997655444444 667888888 445778999987 7899999998777
Q ss_pred cceEEEEe
Q psy5806 1261 QWDVHLIR 1268 (1332)
Q Consensus 1261 ~~~~~~~~ 1268 (1332)
.....+.
T Consensus 235 -~~~~~~~ 241 (391)
T 1l0q_A 235 -KITARIP 241 (391)
T ss_dssp -EEEEEEE
T ss_pred -eEEEEEe
Confidence 4444444
No 85
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=99.14 E-value=3e-12 Score=113.37 Aligned_cols=67 Identities=24% Similarity=0.346 Sum_probs=57.1
Q ss_pred ccccCCCCCceecCCCCceEeCCcCcCCCCCCCCCCCCCC---CCCCCCCCCCCCCCEEecC--CCEEEeeeecC
Q psy5806 10 VGYLQEIPQYKKCNRTGACIPAQWQCDNEFDCEMGEDEMK---CPQASPPKKCSPDEHRCTT--GHCILKTWLCD 79 (1332)
Q Consensus 10 ~~~~~c~~~~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE~~---C~~~~~~~~C~~~~f~C~~--g~Ci~~~~~CD 79 (1332)
|....|.+++|+|.+++.|||..|+|||+.||.|||||.. |+ ...+|.+.+|+|.+ +.||+....+.
T Consensus 4 C~~~~C~~~~f~C~~~g~CIp~~~~CDg~~DC~DgsDE~~~~~C~---~~~~C~~~~f~c~~~~~~ci~~~~~gL 75 (80)
T 2kny_A 4 LEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCL---YNSTGSGSGSGSTEELRVRLASHLRKL 75 (80)
T ss_dssp CSSCCCSSSEEECTTSSCEEEHHHHTTSSCCSSSSTTTSGGGTCS---SSSTTTTCSSCHHHHHHHHTTTTTTTT
T ss_pred CCCCCCCCCceecCCCCeEcChhhcCCCCCCCCCCCccccccCCC---CCcccCcccchhhhHHHHHHHHHHHHH
Confidence 6677899999999867899999999999999999999984 62 24689999999998 68888766544
No 86
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.13 E-value=3.2e-09 Score=124.47 Aligned_cols=231 Identities=13% Similarity=0.106 Sum_probs=150.5
Q ss_pred EEEEeecceEEEEeCCCCCCCCcc-cc---cCCccceEEEEEeCC---CcEEEEEeCC-------CCeEEEEECCCCC--
Q psy5806 1015 LLYTSRFGVIRRISLDTADLLPVT-LP---FPEYMSSIFFDYHYS---KNLIYFADMR-------SGNLRTFDMSDST-- 1078 (1332)
Q Consensus 1015 ll~~~~~~~i~~i~l~~~~~~~~~-~p---i~~~~~~~~id~d~~---~~~lY~sd~~-------~~~I~~~~l~~g~-- 1078 (1332)
|+++.+...|+++..+......+. .| ..+...+.+|++++. +++||+++.. ..+|.+++++.+.
T Consensus 32 l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~ 111 (353)
T 2g8s_A 32 MLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSK 111 (353)
T ss_dssp EEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSB
T ss_pred EEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCC
Confidence 555554433777764322111000 11 123346789999996 8999999764 3579998876432
Q ss_pred --CceeEeec------CCCCceeeEEEecCCeEEEEcCC-------------CceEEEEeeCCc-------------eEE
Q psy5806 1079 --RIKPIPLM------NDTIRDNFVIDWVANNIYYIDSQ-------------MHTINVARSDGQ-------------HKK 1124 (1332)
Q Consensus 1079 --~~~~i~~~------~~~~p~glAvDw~~~~LY~td~~-------------~~~I~v~~ldG~-------------~~~ 1124 (1332)
..++++.. ....+.+|++++. ++||++... .++|.+++.||+ ..+
T Consensus 112 ~~~~~~i~~~~p~~~~~~h~~~~l~~~pd-G~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~ 190 (353)
T 2g8s_A 112 VTDFRTVFRQMPKLSTGNHFGGRLVFDGK-GYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAE 190 (353)
T ss_dssp EEEEEEEEECSSCCBSSSCCCCCEEECSS-SEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTT
T ss_pred CCceEEEEEECCCCCCCcccCccEEECCC-CcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCcc
Confidence 23333321 2345889999974 599999633 357989999987 344
Q ss_pred EEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCC----------------------------ceEEEEe
Q psy5806 1125 ILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGS----------------------------YRTVLVE 1176 (1332)
Q Consensus 1125 ~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~----------------------------~~~~l~~ 1176 (1332)
+...++..|.+|++||..|.||++|.+.. ....|.++...+. ...+..-
T Consensus 191 i~a~G~rnp~gl~~d~~~g~l~~~d~g~~---~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 267 (353)
T 2g8s_A 191 IWSYGIRNPQGMAMNPWSNALWLNEHGPR---GGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYW 267 (353)
T ss_dssp EEEECCSEEEEEEEETTTTEEEEEEECSB---SCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEE
T ss_pred EEEEcCcCccceEEECCCCCEEEEecCCC---CCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEe
Confidence 55568889999999998999999998751 1123444432111 0000000
Q ss_pred cCCCCcceEEEecC------CCEEEEEEcCCCeEEEEecCCCce---EEEEe--ecccceEEEecCCccccccEEEEE-E
Q psy5806 1177 EDLAFPNELAIDFK------QRRLFWADSTNKRIEYCDFFGRSR---KIVIS--KVAPYGLSVRQSPGKAFIVELYWT-D 1244 (1332)
Q Consensus 1177 ~~l~~p~glaiD~~------~~~LY~~d~~~~~I~~~d~dG~~~---~~~~~--~~~P~glav~~~~~~~~~~~lYwt-d 1244 (1332)
..-..|.|+++... .+.||+++...++|.++++++... +.++. ...|.+|++ +.++.||++ |
T Consensus 268 ~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~------~pdG~lyv~td 341 (353)
T 2g8s_A 268 KDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRT------GPDGYLYVLTD 341 (353)
T ss_dssp SSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEE------CTTSCEEEEEC
T ss_pred CCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEE------CCCCcEEEEEe
Confidence 11235889999743 479999999999999999986421 22232 468999999 456789996 6
Q ss_pred CCCCEEEEEEe
Q psy5806 1245 WEAMSVVIARE 1255 (1332)
Q Consensus 1245 ~~~~~V~~~~~ 1255 (1332)
..+++|+|+.+
T Consensus 342 ~~~g~I~ri~~ 352 (353)
T 2g8s_A 342 ESSGELLKVSP 352 (353)
T ss_dssp STTEEEEEEEC
T ss_pred CCCCEEEEEeC
Confidence 78899999864
No 87
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.10 E-value=3e-07 Score=114.32 Aligned_cols=346 Identities=9% Similarity=0.019 Sum_probs=217.4
Q ss_pred EEeCCCCeEEEEecccCcCCCCceEEEecC-CCCcEEEecccccCceeEEeCCCCCeEEEEeCCCCeEEEEccC---CCc
Q psy5806 831 VVHYGLGLMVWADWSRTRLTNNRIEMAHMD-GTNRAVFETEVIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLA---TGR 906 (1332)
Q Consensus 831 avdp~~g~lywtd~g~~~~~~~~I~r~~~d-G~~~~~l~~~l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~d---G~~ 906 (1332)
+++|. |++|++..... +|...+.+ |.-...+.... .|.+++++.++ ++||.++.. +.|..+|++ +.-
T Consensus 144 ~~~p~-~~~~vs~~~d~-----~V~v~D~~t~~~~~~i~~g~-~~~~v~~spdg-~~l~v~~~d-~~V~v~D~~~~t~~~ 214 (543)
T 1nir_A 144 DLDLP-NLFSVTLRDAG-----QIALVDGDSKKIVKVIDTGY-AVHISRMSASG-RYLLVIGRD-ARIDMIDLWAKEPTK 214 (543)
T ss_dssp CCCGG-GEEEEEEGGGT-----EEEEEETTTCCEEEEEECST-TEEEEEECTTS-CEEEEEETT-SEEEEEETTSSSCEE
T ss_pred ccCCC-CEEEEEEcCCC-----eEEEEECCCceEEEEEecCc-ccceEEECCCC-CEEEEECCC-CeEEEEECcCCCCcE
Confidence 36664 78888886544 56655443 22222222222 27899999999 999999977 999999993 222
Q ss_pred eeEEeccCCcceEEEEe------CCEEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCc
Q psy5806 907 AKRAYAVQSHPYTLTVL------DYYVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCS 980 (1332)
Q Consensus 907 ~~~l~~~~~~P~~la~~------~~~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCs 980 (1332)
...+ .....|.++++. +.+||.+....++|...+..+++.
T Consensus 215 ~~~i-~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~--------------------------------- 260 (543)
T 1nir_A 215 VAEI-KIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP--------------------------------- 260 (543)
T ss_dssp EEEE-ECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE---------------------------------
T ss_pred EEEE-ecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccc---------------------------------
Confidence 2222 245678888875 347777766556654433222211
Q ss_pred cccccCCCCccccCCCCeeEccCCccccccCcceEEEEeecceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEE
Q psy5806 981 HLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIY 1060 (1332)
Q Consensus 981 hlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY 1060 (1332)
+..++........ .....-..+.++.+++.++.+|
T Consensus 261 -------------------------------------------~~~i~~~g~~~~~--~~~~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 261 -------------------------------------------KQIVSTRGMTVDT--QTYHPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp -------------------------------------------EEEEECCEECSSS--CCEESCCCEEEEEECSSSSEEE
T ss_pred -------------------------------------------ceeecccCcccCc--cccccCCceEEEEECCCCCEEE
Confidence 1111110000000 0000011357788888888999
Q ss_pred EEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEEEEecC-CCCc-eEEE
Q psy5806 1061 FADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKKILVND-LMEP-LAIA 1137 (1332)
Q Consensus 1061 ~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~~~~~~-~~~P-~~ia 1137 (1332)
++....++|..+++.++....+........|.++++|+.++.||++....+.|.++++. |+....+..+ ..+| +++.
T Consensus 296 vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~ 375 (543)
T 1nir_A 296 VNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGAN 375 (543)
T ss_dssp EEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEE
T ss_pred EEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcc
Confidence 99988999999998754433321212345799999999999999999888899999987 4444444332 1223 3444
Q ss_pred -EcCCCcEEEEEecCCCCCCCCCcEEEEecCC-------CceEEEEecCCCCcceEEEecCCCEEEEEEc------CCCe
Q psy5806 1138 -VYPRRGLLFYSHWGLYDNSPTTKIEKVYLDG-------SYRTVLVEEDLAFPNELAIDFKQRRLFWADS------TNKR 1203 (1332)
Q Consensus 1138 -vdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG-------~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~------~~~~ 1203 (1332)
++|..|.+|.+.... ...|...+++. -.....+...-..+..+++.+++++||.... ..+.
T Consensus 376 ~~~p~~g~~~~s~~~~-----d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~ 450 (543)
T 1nir_A 376 FVHPKYGPVWSTSHLG-----DGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQS 450 (543)
T ss_dssp EEETTTEEEEEEEBSS-----SSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTC
T ss_pred cCCCCCccEEEeccCC-----CceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCce
Confidence 478779999887522 25788888865 2222233322234567999999999998652 1458
Q ss_pred EEEEecCCCc-e-EEE-E------e--ecccceEEEecCCccccccEEEEEEC----CCCEEEEEEecCCCCcceEEEEe
Q psy5806 1204 IEYCDFFGRS-R-KIV-I------S--KVAPYGLSVRQSPGKAFIVELYWTDW----EAMSVVIAREKSDTGQWDVHLIR 1268 (1332)
Q Consensus 1204 I~~~d~dG~~-~-~~~-~------~--~~~P~glav~~~~~~~~~~~lYwtd~----~~~~V~~~~~~~g~~~~~~~~~~ 1268 (1332)
|..+|.+... . +++ + . ...+..+++ +..+.+||++.| ..+.|..+|..|+ +...++.
T Consensus 451 v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~g~~~~~s~~~~~~~~~~i~v~D~~t~---~~~~~i~ 522 (543)
T 1nir_A 451 VAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEY-----NKRGDEVWFSVWNGKNDSSALVVVDDKTL---KLKAVVK 522 (543)
T ss_dssp EEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEE-----CSSSSEEEEEEECCTTSCCEEEEEETTTT---EEEEEEC
T ss_pred EEEEECCCCCCCeEEeechhhcccCCCCCceEeccC-----CCCCCEEEEEeecCCCCCCeEEEEECCCc---eEEEeec
Confidence 9999997433 3 333 1 1 567788888 667899999998 3699999999998 6666655
Q ss_pred c-CCCCeeeE
Q psy5806 1269 S-NQEDFLNI 1277 (1332)
Q Consensus 1269 ~-~~~~~~~i 1277 (1332)
. .+..|.++
T Consensus 523 ~~~~~~p~g~ 532 (543)
T 1nir_A 523 DPRLITPTGK 532 (543)
T ss_dssp CTTCCSEEEE
T ss_pred CCCccCCCee
Confidence 3 34445544
No 88
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.10 E-value=3.5e-08 Score=115.64 Aligned_cols=201 Identities=7% Similarity=0.010 Sum_probs=142.0
Q ss_pred cceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeE----eecC---------CCCceeeEEEecCCeEEEEcCCCc
Q psy5806 1045 MSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPI----PLMN---------DTIRDNFVIDWVANNIYYIDSQMH 1111 (1332)
Q Consensus 1045 ~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i----~~~~---------~~~p~glAvDw~~~~LY~td~~~~ 1111 (1332)
..|..+++ .++.||+++...+.|..++++.......+ ...+ ...|.++++++.++.||+++...+
T Consensus 100 ~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 177 (361)
T 3scy_A 100 ADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTD 177 (361)
T ss_dssp SCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTT
T ss_pred CCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCC
Confidence 45778887 67789999988899999988632222111 1111 123578999999999999999889
Q ss_pred eEEEEeeCCce--------------EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEE--
Q psy5806 1112 TINVARSDGQH--------------KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLV-- 1175 (1332)
Q Consensus 1112 ~I~v~~ldG~~--------------~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~-- 1175 (1332)
.|.+++++... ..........|++++++|...+||+++... ..|...+++......+.
T Consensus 178 ~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~------~~v~v~~~~~g~~~~~~~~ 251 (361)
T 3scy_A 178 QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG------GTVIAFRYADGMLDEIQTV 251 (361)
T ss_dssp EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT------CEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCC------CeEEEEEecCCceEEeEEE
Confidence 99999887322 111223346799999999777899998654 56777777643332222
Q ss_pred e---cCCCCcceEEEecCCCEEEEEEcC-CCeEEEEecC--CCceEEEEe---ecccceEEEecCCccccccEEEEEECC
Q psy5806 1176 E---EDLAFPNELAIDFKQRRLFWADST-NKRIEYCDFF--GRSRKIVIS---KVAPYGLSVRQSPGKAFIVELYWTDWE 1246 (1332)
Q Consensus 1176 ~---~~l~~p~glaiD~~~~~LY~~d~~-~~~I~~~d~d--G~~~~~~~~---~~~P~glav~~~~~~~~~~~lYwtd~~ 1246 (1332)
. .....|.+|+++++++.||+++.. .+.|..++++ ....+.+.. ...|.+|++ ++++.+||+++..
T Consensus 252 ~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~-----spdg~~l~~~~~~ 326 (361)
T 3scy_A 252 AADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFII-----TPNGKYLLVACRD 326 (361)
T ss_dssp ESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEE-----CTTSCEEEEEETT
T ss_pred ecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEE-----CCCCCEEEEEECC
Confidence 1 112447799999999999999988 8888888886 223333322 568999999 5567789999988
Q ss_pred CCEEEE--EEecCC
Q psy5806 1247 AMSVVI--AREKSD 1258 (1332)
Q Consensus 1247 ~~~V~~--~~~~~g 1258 (1332)
.+.|.. ++..+|
T Consensus 327 ~~~v~v~~~d~~~g 340 (361)
T 3scy_A 327 TNVIQIFERDQATG 340 (361)
T ss_dssp TTEEEEEEECTTTC
T ss_pred CCCEEEEEEECCCC
Confidence 888876 565565
No 89
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.09 E-value=3.6e-07 Score=109.53 Aligned_cols=197 Identities=14% Similarity=0.111 Sum_probs=148.6
Q ss_pred cceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcC-------CCceEEEEe
Q psy5806 1045 MSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDS-------QMHTINVAR 1117 (1332)
Q Consensus 1045 ~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~-------~~~~I~v~~ 1117 (1332)
..+.+++|++.++.+|++....+.|+.+++.++.....+ .....|.++++++.++.||++.. ..+.|.+++
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d 289 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKT--DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYS 289 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEC--CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEE
T ss_pred CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEe--cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEE
Confidence 457899999999999999988899999998744322222 23456899999998999999874 356888999
Q ss_pred eCCce-EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEE
Q psy5806 1118 SDGQH-KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFW 1196 (1332)
Q Consensus 1118 ldG~~-~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~ 1196 (1332)
+.... ...+. ....|.+++++|....||++.... +.|...+++.......+. ....|.+++++++++.||.
T Consensus 290 ~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~------~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~ 361 (433)
T 3bws_A 290 MDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCC------SKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYV 361 (433)
T ss_dssp TTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTT------TEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEE
T ss_pred CCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCC------CEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEE
Confidence 87443 33332 224789999999777999997665 689999998655544444 3467899999999999999
Q ss_pred EEcCC--------------CeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEec
Q psy5806 1197 ADSTN--------------KRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREK 1256 (1332)
Q Consensus 1197 ~d~~~--------------~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~ 1256 (1332)
+.... +.|...|+........+. ...|.++++ ++.+.+||.+....+.|...+..
T Consensus 362 ~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~-----s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 362 SCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDV-----SPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEE-----CTTSCEEEEEETTTTEEEEEEET
T ss_pred EecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEE-----cCCCCEEEEEECCCCeEEEEEec
Confidence 98764 489999986544444444 677899999 45677899998888899888754
No 90
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.08 E-value=8.8e-09 Score=118.95 Aligned_cols=226 Identities=12% Similarity=0.030 Sum_probs=153.4
Q ss_pred CCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCcee-----EeecCCCCceeeEEEe---cCCeEEEEc--CCCc
Q psy5806 1042 PEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKP-----IPLMNDTIRDNFVIDW---VANNIYYID--SQMH 1111 (1332)
Q Consensus 1042 ~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~-----i~~~~~~~p~glAvDw---~~~~LY~td--~~~~ 1111 (1332)
.++..|.+|++.+.+ +||+++...++|++++.+++....+ +...+.+.|.|||+++ .++.||++. ...+
T Consensus 29 ~gL~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~ 107 (347)
T 3das_A 29 TGLNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDN 107 (347)
T ss_dssp CCCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSE
T ss_pred cCCCCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCC
Confidence 467789999999875 6999997789999998543332211 1124566899999997 378999964 3466
Q ss_pred eEEEEeeCCc--------eEEEEec-----CCCCceEEEEcCCCcEEEEEecCCC-------CCCCCCcEEEEecCCC--
Q psy5806 1112 TINVARSDGQ--------HKKILVN-----DLMEPLAIAVYPRRGLLFYSHWGLY-------DNSPTTKIEKVYLDGS-- 1169 (1332)
Q Consensus 1112 ~I~v~~ldG~--------~~~~~~~-----~~~~P~~iavdp~~g~Lywtd~~~~-------~~~~~~~I~r~~ldG~-- 1169 (1332)
+|.++.+++. ..+++.. ....+..|+++| .|+||++.-... -+...++|.|++.||+
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip 186 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA 186 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc
Confidence 8888887761 1233222 223467799999 789999952110 0123589999999998
Q ss_pred ------ceEEEEecCCCCcceEEEecCCCEEEEEEcCCC---eEEEEecCCCce---------------EEEEe----ec
Q psy5806 1170 ------YRTVLVEEDLAFPNELAIDFKQRRLFWADSTNK---RIEYCDFFGRSR---------------KIVIS----KV 1221 (1332)
Q Consensus 1170 ------~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~---~I~~~d~dG~~~---------------~~~~~----~~ 1221 (1332)
.. .++..++..|.||++|+ .++||++|.+.+ +|..+. .|.+- ..++. ..
T Consensus 187 ~~nPf~~~-~i~a~G~RNp~Gla~dp-~G~L~~~d~g~~~~deln~i~-~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ 263 (347)
T 3das_A 187 PGNPFPGS-PVYSYGHRNVQGLAWDD-KQRLFASEFGQDTWDELNAIK-PGDNYGWPEAEGKGGGSGFHDPVAQWSTDEA 263 (347)
T ss_dssp TTCSSTTC-CEEEBCCSBCCEEEECT-TCCEEEEECCSSSCEEEEEEC-TTCBCCTTTCCSSCCCTTCCCCSEEECTTTC
T ss_pred CCCCCCCC-eEEeeCCCCcceEEECC-CCCEEEEecCCCCCceeeEEc-CCCEecCCcccCCCCCccccCCcEecCCCCC
Confidence 43 35666888999999998 589999998754 355443 34320 00111 14
Q ss_pred ccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEecC-CCCeeeEEE
Q psy5806 1222 APYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRSN-QEDFLNIKA 1279 (1332)
Q Consensus 1222 ~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~~-~~~~~~i~~ 1279 (1332)
.|.||++ +++.+|.+....++|.++....+......+.+..+ ..++.+|.+
T Consensus 264 ap~G~~~-------~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~ 315 (347)
T 3das_A 264 SPSGIAY-------AEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAP 315 (347)
T ss_dssp CEEEEEE-------ETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEE
T ss_pred CCcceEE-------EcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEE
Confidence 7899999 99999999999999999998765100112334433 356777765
No 91
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.07 E-value=1.2e-08 Score=116.86 Aligned_cols=196 Identities=17% Similarity=0.105 Sum_probs=140.7
Q ss_pred cceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeE-eec----CCCCceeeEEEecCCeEEEEcCCC---------
Q psy5806 1045 MSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPI-PLM----NDTIRDNFVIDWVANNIYYIDSQM--------- 1110 (1332)
Q Consensus 1045 ~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i-~~~----~~~~p~glAvDw~~~~LY~td~~~--------- 1110 (1332)
..+.++++++.+++||+++.. +.|.+++.+ +... .+ ... ....|.+|++|. .++||+++...
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~-~~l~~~d~~-g~~~-~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMR-LGLLVVQTD-GTFE-EIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETT-TEEEEEETT-SCEE-ECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCB
T ss_pred CCCceEEEecCCCcEEEEECC-CCEEEEeCC-CCEE-EEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccc
Confidence 458899999886789999854 479999976 4322 22 111 123689999996 56899998754
Q ss_pred ------ceEEEEeeCCceEEEEecCCCCceEEEEc----CCCcEEEEEecCCCCCCCCCcEEEEecC--CCc--eEEEEe
Q psy5806 1111 ------HTINVARSDGQHKKILVNDLMEPLAIAVY----PRRGLLFYSHWGLYDNSPTTKIEKVYLD--GSY--RTVLVE 1176 (1332)
Q Consensus 1111 ------~~I~v~~ldG~~~~~~~~~~~~P~~iavd----p~~g~Lywtd~~~~~~~~~~~I~r~~ld--G~~--~~~l~~ 1176 (1332)
+.|.+++.+|+.... ...+..|.+|+++ |....||+++... .+|.+.+++ |.. ...+..
T Consensus 147 ~~~~~~~~l~~~~~~g~~~~~-~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~------~~i~~~~~~~~g~~~~~~~~~~ 219 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTDGQMIQV-DTAFQFPNGIAVRHMNDGRPYQLIVAETPT------KKLWSYDIKGPAKIENKKVWGH 219 (314)
T ss_dssp TTSSSCEEEEEECTTSCEEEE-EEEESSEEEEEEEECTTSCEEEEEEEETTT------TEEEEEEEEETTEEEEEEEEEE
T ss_pred cccCCCCeEEEECCCCCEEEe-ccCCCCcceEEEecccCCCCCEEEEEECCC------CeEEEEECCCCCccccceEEEE
Confidence 578777777654433 3445689999999 9656899998765 689999876 321 112221
Q ss_pred --cCC-CCcceEEEecCCCEEEEEEcCCCeEEEEecC-CCceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEE
Q psy5806 1177 --EDL-AFPNELAIDFKQRRLFWADSTNKRIEYCDFF-GRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVV 1251 (1332)
Q Consensus 1177 --~~l-~~p~glaiD~~~~~LY~~d~~~~~I~~~d~d-G~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~ 1251 (1332)
... ..|.+|++|.+ ++||+++...+.|.++|.+ |.....+.. ...|.++++ ++.+.+||+++...+.|.
T Consensus 220 ~~~~~~~~p~~i~~d~~-G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~-----~~dg~~l~v~~~~~~~l~ 293 (314)
T 1pjx_A 220 IPGTHEGGADGMDFDED-NNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHF-----KPQTKTIFVTEHENNAVW 293 (314)
T ss_dssp CCCCSSCEEEEEEEBTT-CCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEE-----CTTSSEEEEEETTTTEEE
T ss_pred CCCCCCCCCCceEECCC-CCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEE-----CCCCCEEEEEeCCCCeEE
Confidence 111 56999999964 6899999888999999998 655444333 578999999 344556999999889999
Q ss_pred EEEecC
Q psy5806 1252 IAREKS 1257 (1332)
Q Consensus 1252 ~~~~~~ 1257 (1332)
+++...
T Consensus 294 ~~~~~~ 299 (314)
T 1pjx_A 294 KFEWQR 299 (314)
T ss_dssp EEECSS
T ss_pred EEeCCC
Confidence 999764
No 92
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.07 E-value=1.4e-06 Score=104.23 Aligned_cols=285 Identities=15% Similarity=0.117 Sum_probs=182.9
Q ss_pred CCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEecc------cccCceeEEeCCCCCeEEEEeCCCCeEE
Q psy5806 825 YRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFETE------VIWPSCLAIDYSDNPKLYWVDTSKHTIE 898 (1332)
Q Consensus 825 ~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~~------l~~P~gl~iD~~~~~~lYw~d~~~~~I~ 898 (1332)
..|.+++++| .+.++.+.... .+|...+++.......... ...+.+++++..+ ++|++....+.|.
T Consensus 123 ~~~~~~~~s~-~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~s~~~d~~v~ 194 (433)
T 3bws_A 123 FQPKSVRFID-NTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHN--ELWVSQMQANAVH 194 (433)
T ss_dssp SCBCCCEESS-SSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGT--EEEEEEGGGTEEE
T ss_pred CCceEEEEeC-CCeEEEEeCCC-----CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCC--EEEEEECCCCEEE
Confidence 5688999999 78888886433 3688887774333322211 3345568886544 8888888778898
Q ss_pred EEccCCCce-eEEeccCCcceEEEEe--CCEEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCC
Q psy5806 899 YKTLATGRA-KRAYAVQSHPYTLTVL--DYYVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSN 975 (1332)
Q Consensus 899 ~~~~dG~~~-~~l~~~~~~P~~la~~--~~~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~ 975 (1332)
..+++.... ..+......|.++++. +.++|.+....+.|...+..+++.+.
T Consensus 195 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~-------------------------- 248 (433)
T 3bws_A 195 VFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR-------------------------- 248 (433)
T ss_dssp EEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE--------------------------
T ss_pred EEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE--------------------------
Confidence 888875433 3333334556777776 45677777666666554433221100
Q ss_pred CCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEEeecceEEEEeCCCCCCCCcccccCCccceEEEEEeCC
Q psy5806 976 NGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYS 1055 (1332)
Q Consensus 976 nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~ 1055 (1332)
. ++....+.++++++.
T Consensus 249 --------------------------------------------------~--------------~~~~~~~~~~~~~~~ 264 (433)
T 3bws_A 249 --------------------------------------------------K--------------TDKIGLPRGLLLSKD 264 (433)
T ss_dssp --------------------------------------------------E--------------CCCCSEEEEEEECTT
T ss_pred --------------------------------------------------E--------------ecCCCCceEEEEcCC
Confidence 0 000112345555555
Q ss_pred CcEEEEEeC-------CCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceE-EEEe
Q psy5806 1056 KNLIYFADM-------RSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHK-KILV 1127 (1332)
Q Consensus 1056 ~~~lY~sd~-------~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~-~~~~ 1127 (1332)
++.||.+.. ..+.|+.+++.++.....+. ....|.++++++.++.||++....+.|.+++++.... ..+.
T Consensus 265 g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~ 342 (433)
T 3bws_A 265 GKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG--PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP 342 (433)
T ss_dssp SSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE--EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc--CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec
Confidence 555555543 24456666655332222221 1236889999988889999988889999999985433 3343
Q ss_pred cCCCCceEEEEcCCCcEEEEEecCCC--------CCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEc
Q psy5806 1128 NDLMEPLAIAVYPRRGLLFYSHWGLY--------DNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADS 1199 (1332)
Q Consensus 1128 ~~~~~P~~iavdp~~g~Lywtd~~~~--------~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~ 1199 (1332)
....|.+++++|...+||.+..+.. .....+.|+..++........+.. -..|.+++++++++.||.+..
T Consensus 343 -~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~ 420 (433)
T 3bws_A 343 -VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDF 420 (433)
T ss_dssp -CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEET
T ss_pred -CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEEC
Confidence 4467999999998778999876430 000124799999866555555553 367899999999999999988
Q ss_pred CCCeEEEEecCC
Q psy5806 1200 TNKRIEYCDFFG 1211 (1332)
Q Consensus 1200 ~~~~I~~~d~dG 1211 (1332)
..+.|...++++
T Consensus 421 ~d~~i~v~~~~~ 432 (433)
T 3bws_A 421 LDHQIRVYRRDG 432 (433)
T ss_dssp TTTEEEEEEETT
T ss_pred CCCeEEEEEecC
Confidence 788999888875
No 93
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=99.06 E-value=7.1e-11 Score=90.91 Aligned_cols=37 Identities=35% Similarity=0.827 Sum_probs=35.0
Q ss_pred CCCCCceecCCCCceEeCCcCcCCCCCCCCCCCCCCC
Q psy5806 14 QEIPQYKKCNRTGACIPAQWQCDNEFDCEMGEDEMKC 50 (1332)
Q Consensus 14 ~c~~~~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE~~C 50 (1332)
.|.+.+|+|.+++.|||..|+|||+.||.|||||.+|
T Consensus 3 ~C~~~~F~C~~~g~CI~~~~~CDg~~DC~DgSDE~~C 39 (42)
T 1cr8_A 3 GCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSC 39 (42)
T ss_dssp CSSTTCEECTTTCCEECGGGSSSSSCCSSSSTTTTTC
T ss_pred CCCCCceEeCCCCeEcChhhcCCCCcCCCCCCcccCC
Confidence 6899999998568999999999999999999999998
No 94
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=99.05 E-value=6.4e-11 Score=88.53 Aligned_cols=37 Identities=49% Similarity=1.079 Sum_probs=34.7
Q ss_pred CCCCCCEEecCCCEEEeeeecCCCCCCCCCCCccccc
Q psy5806 58 KCSPDEHRCTTGHCILKTWLCDGIPDCSLGEDERNCN 94 (1332)
Q Consensus 58 ~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~C~ 94 (1332)
.|.+.+|+|.+|+||+..|+|||..||.|||||.+|+
T Consensus 1 ~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~C~ 37 (37)
T 1ajj_A 1 PCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCA 37 (37)
T ss_dssp CCCTTCEECTTSCEECGGGTTSSSCCSTTCGGGTTCC
T ss_pred CCCCCceEcCCCCeechhhccCCCCCCCCCccccCCC
Confidence 3788999999999999999999999999999999884
No 95
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=99.05 E-value=6.2e-11 Score=88.61 Aligned_cols=36 Identities=33% Similarity=0.735 Sum_probs=34.4
Q ss_pred CCCCCceecCCCCceEeCCcCcCCCCCCCCCCCCCCC
Q psy5806 14 QEIPQYKKCNRTGACIPAQWQCDNEFDCEMGEDEMKC 50 (1332)
Q Consensus 14 ~c~~~~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE~~C 50 (1332)
+|.+.+|+|. +|.|||..|+|||..||.|||||.+|
T Consensus 1 ~C~~~~f~C~-~g~Ci~~~~~CDg~~DC~DgsDE~~C 36 (37)
T 1ajj_A 1 PCSAFEFHCL-SGECIHSSWRCDGGPDCKDKSDEENC 36 (37)
T ss_dssp CCCTTCEECT-TSCEECGGGTTSSSCCSTTCGGGTTC
T ss_pred CCCCCceEcC-CCCeechhhccCCCCCCCCCccccCC
Confidence 5889999998 89999999999999999999999988
No 96
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=99.04 E-value=1.2e-11 Score=129.36 Aligned_cols=62 Identities=31% Similarity=0.651 Sum_probs=54.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEe--cCCCEEEeeeecCCCCCCCCCCCccccccc-CCCCCcccc
Q psy5806 37 NEFDCEMGEDEMKCPQASPPKKCSPDEHRC--TTGHCILKTWLCDGIPDCSLGEDERNCNKT-CDAQKEFSC 105 (1332)
Q Consensus 37 g~~DC~dgsDE~~C~~~~~~~~C~~~~f~C--~~g~Ci~~~~~CDg~~DC~DgsDE~~C~~~-C~~~~~~~C 105 (1332)
+..+|.|+|||.+| ..|++++|+| .+|+|||..|+|||..||.|||||.+|+.. |.+. +|.|
T Consensus 39 ~~~~c~d~sDE~~C------~~C~~~~F~C~~~~g~CIp~~~~CDG~~DC~DgSDE~~C~~~~C~~~-~F~c 103 (215)
T 2gtl_O 39 KAGSLRHRVEELED------PSCDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDCTLPTKAGD-KFIG 103 (215)
T ss_dssp HHHHHHHHHHHHSC------CSSCTTEEECCSSSCCEEEGGGTTSSSCCSSSCHHHHCCCCSSCTTC-EEEE
T ss_pred ccccCCcchhhccC------CCCCCcceeeCCCCCcCccccccCCCCCcCCCcccccCCCCCCcCCC-ceee
Confidence 34689999999999 3699999999 799999999999999999999999999753 7766 7776
No 97
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=99.03 E-value=1.1e-10 Score=93.13 Aligned_cols=39 Identities=33% Similarity=0.661 Sum_probs=36.0
Q ss_pred ccCCCCCceecCCCCceEeCCcCcCCCCCCCCCCCCCCC
Q psy5806 12 YLQEIPQYKKCNRTGACIPAQWQCDNEFDCEMGEDEMKC 50 (1332)
Q Consensus 12 ~~~c~~~~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE~~C 50 (1332)
...|.+.+|+|.++++|||..|+|||+.||.|||||.+|
T Consensus 4 ~~~C~~~~F~C~~~g~CI~~~~~CDG~~DC~DgSDE~~C 42 (50)
T 2knx_A 4 GKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIA 42 (50)
T ss_dssp TCTTCTTEEEETTTTEEEETTTTTSSSCCSTTCGGGSGG
T ss_pred CCCCCCCcEEcCCCCeEcChhhcCCCCCCCCCCCccccc
Confidence 457999999996589999999999999999999999987
No 98
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=99.03 E-value=5.6e-11 Score=94.66 Aligned_cols=40 Identities=43% Similarity=1.002 Sum_probs=37.2
Q ss_pred CCCCCCCCCEEecCCCEEEeeeecCCCCCCCCCCCccccc
Q psy5806 55 PPKKCSPDEHRCTTGHCILKTWLCDGIPDCSLGEDERNCN 94 (1332)
Q Consensus 55 ~~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~C~ 94 (1332)
.+..|++.+|+|.+|+||+..|+|||..||.|||||.+|.
T Consensus 3 ~p~~C~~~~F~C~nG~CIp~~~~CDG~~DC~DgSDE~~~~ 42 (52)
T 2m0p_A 3 APASCLDTQYTCDNHQCISKNWVCDTDNDCGDGSDEKNCN 42 (52)
T ss_dssp CCCSSCSSEEECTTCCEEETTSTTSSSCSSSSCHHHHSCC
T ss_pred CCCCCCCCceECCCCCEEecCccCCCCCCCCCCCccccch
Confidence 3568999999999999999999999999999999999874
No 99
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=99.02 E-value=1.1e-10 Score=88.30 Aligned_cols=36 Identities=42% Similarity=0.948 Sum_probs=33.7
Q ss_pred CCCCceecCC-CCceEeCCcCcCCCCCCCCCCCCCCC
Q psy5806 15 EIPQYKKCNR-TGACIPAQWQCDNEFDCEMGEDEMKC 50 (1332)
Q Consensus 15 c~~~~f~C~~-~~~Ci~~~~~CDg~~DC~dgsDE~~C 50 (1332)
|++.+|+|.+ +++|||..|+|||..||.|||||.+|
T Consensus 1 C~~~~f~C~~~~g~Cip~~~~CDg~~DC~dgsDE~~C 37 (39)
T 3dpr_E 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENC 37 (39)
T ss_dssp CCTTTCCCSSSSSCCCCTTSSSSSSCCSTTTTTSTTC
T ss_pred CCCCceecCCCCCCEeCccccCCCcccCcCCcccccC
Confidence 7889999984 48999999999999999999999998
No 100
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=99.02 E-value=1.4e-10 Score=89.33 Aligned_cols=39 Identities=41% Similarity=0.952 Sum_probs=35.7
Q ss_pred CCCCCCCEEec-CCCEEEeeeecCCCCCCCCCCCcccccc
Q psy5806 57 KKCSPDEHRCT-TGHCILKTWLCDGIPDCSLGEDERNCNK 95 (1332)
Q Consensus 57 ~~C~~~~f~C~-~g~Ci~~~~~CDg~~DC~DgsDE~~C~~ 95 (1332)
..|.+.+|+|. +|.||+..|+|||..||.|||||.+|..
T Consensus 2 ~~C~~~~F~C~~~g~CI~~~~~CDg~~DC~DgSDE~~C~~ 41 (42)
T 1cr8_A 2 GGCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKSCEG 41 (42)
T ss_dssp CCSSTTCEECTTTCCEECGGGSSSSSCCSSSSTTTTTCCC
T ss_pred CCCCCCceEeCCCCeEcChhhcCCCCcCCCCCCcccCCCC
Confidence 46889999998 4899999999999999999999999864
No 101
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=99.02 E-value=7.5e-11 Score=93.41 Aligned_cols=39 Identities=36% Similarity=0.890 Sum_probs=35.0
Q ss_pred ccCCCCCceecCC----CCceEeCCcCcCCCCCCCCCCCCCCC
Q psy5806 12 YLQEIPQYKKCNR----TGACIPAQWQCDNEFDCEMGEDEMKC 50 (1332)
Q Consensus 12 ~~~c~~~~f~C~~----~~~Ci~~~~~CDg~~DC~dgsDE~~C 50 (1332)
+..|.+.+|+|.+ +++|||..|+|||..||.|||||.+|
T Consensus 4 ~~~C~~~~F~C~~~~~~~g~CIp~~~~CDG~~DC~DgSDE~~C 46 (47)
T 1k7b_A 4 FGSCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGC 46 (47)
T ss_dssp --CCSTTEECCSSCTTSCCCCEEGGGSSCSSCCSSSSTTTGGG
T ss_pred CCCCCCCceEcCCCCCCCCcCCCccccCCCcCCCCCCcccCCC
Confidence 4679999999985 68999999999999999999999988
No 102
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=99.01 E-value=1.2e-10 Score=90.54 Aligned_cols=39 Identities=36% Similarity=0.864 Sum_probs=34.2
Q ss_pred CCCCCCCCEEecCCCEEEeeeecCCCCCCCCCCCccccc
Q psy5806 56 PKKCSPDEHRCTTGHCILKTWLCDGIPDCSLGEDERNCN 94 (1332)
Q Consensus 56 ~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~C~ 94 (1332)
...|.+.+|+|.+|+||+..|+|||..||.|||||.+|+
T Consensus 5 ~~~C~~~~f~C~~g~CI~~~~~CDg~~DC~DgSDE~~C~ 43 (44)
T 3a7q_B 5 AKECEKDQFQCRNERCIPSVWRCDEDDDCLDHSDEDDCP 43 (44)
T ss_dssp ---CCTTEEECTTSCEEEGGGTTSSSCCSSSSTTTSCC-
T ss_pred CCCCCCCceEcCCCCEeChhhccCCCCCCCCCccccCCC
Confidence 457899999999999999999999999999999999985
No 103
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=99.01 E-value=1.7e-10 Score=89.28 Aligned_cols=39 Identities=33% Similarity=0.749 Sum_probs=36.1
Q ss_pred CCCCCCCCEEecC-CCEEEeeeecCCCCCCCCCCCccccc
Q psy5806 56 PKKCSPDEHRCTT-GHCILKTWLCDGIPDCSLGEDERNCN 94 (1332)
Q Consensus 56 ~~~C~~~~f~C~~-g~Ci~~~~~CDg~~DC~DgsDE~~C~ 94 (1332)
...|.+++|+|.+ |+||+..|+|||..||.|||||.+|+
T Consensus 4 ~~~C~~~~f~C~~~g~CI~~~~~CDg~~DC~DgSDE~~C~ 43 (43)
T 2jm4_A 4 DVKCSLGYFPCGNITKCLPQLLHCNGVDDCGNQADEDNCG 43 (43)
T ss_dssp SCSCCTTEEECSSSSCEEEGGGTTSSCCCSSSCCTTSSCC
T ss_pred CCCCCCCeeECCCCCeEcCHhhccCCCCCCCCCcccCCCC
Confidence 4578899999999 89999999999999999999999884
No 104
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.01 E-value=1.8e-08 Score=113.90 Aligned_cols=195 Identities=9% Similarity=0.037 Sum_probs=136.4
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCC-------CceeeEE---EecCCeEEE-EcC------
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDT-------IRDNFVI---DWVANNIYY-IDS------ 1108 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~-------~p~glAv---Dw~~~~LY~-td~------ 1108 (1332)
.|.+++||..++++|+++...++|.+++.. +...+.+...++. .|.||.+ |.. +.|++ ++.
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~-~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPK-TQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFNF 91 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTT-TCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTCT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCC-CCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEcccccccc
Confidence 367889999999999999999999999976 3333333323321 5789999 665 77777 452
Q ss_pred ------CCceEEEEeeC----CceEEE--Eec-----------CCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEe
Q psy5806 1109 ------QMHTINVARSD----GQHKKI--LVN-----------DLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVY 1165 (1332)
Q Consensus 1109 ------~~~~I~v~~ld----G~~~~~--~~~-----------~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ 1165 (1332)
....+.+++++ |+.... +.. ....|.+||||+ .|..|+++... .+.|+|++
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~-----~~~I~rV~ 165 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALG-----MPAIARVS 165 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEES-----SCEEEEEC
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCC-----CCeEEEEe
Confidence 24678888988 554333 211 122488999999 89999998643 27899999
Q ss_pred cCCCceEEEEecC-----CCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCce--EEEE------eecccceE-EEecC
Q psy5806 1166 LDGSYRTVLVEED-----LAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSR--KIVI------SKVAPYGL-SVRQS 1231 (1332)
Q Consensus 1166 ldG~~~~~l~~~~-----l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~--~~~~------~~~~P~gl-av~~~ 1231 (1332)
.||+...++.... ..-++||++.++++.|++++. .++|.++|+.-..+ ..+. .+..|.+| ++
T Consensus 166 pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~--- 241 (334)
T 2p9w_A 166 ADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTV--- 241 (334)
T ss_dssp TTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEE---
T ss_pred CCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCccccccc---
Confidence 9999666554211 223779999999999999998 99999999983322 1111 14568885 55
Q ss_pred CccccccEE-EEEECCCCEEEEEEe
Q psy5806 1232 PGKAFIVEL-YWTDWEAMSVVIARE 1255 (1332)
Q Consensus 1232 ~~~~~~~~l-Ywtd~~~~~V~~~~~ 1255 (1332)
.+++.+ |+++...+.+....+
T Consensus 242 ---~~~G~vllV~~~~~~~~~l~S~ 263 (334)
T 2p9w_A 242 ---PVGNESVLVGARAPYAISFRSW 263 (334)
T ss_dssp ---EETTEEEEEEEETTEEEEEECS
T ss_pred ---ccCCEEEEEEcCCCCEEEEECC
Confidence 356665 999976665444443
No 105
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=99.00 E-value=1.8e-10 Score=89.63 Aligned_cols=38 Identities=32% Similarity=0.626 Sum_probs=35.5
Q ss_pred ccCCCCCceecCCCCceEeCCcCcCCCCCCCCCCCCCCC
Q psy5806 12 YLQEIPQYKKCNRTGACIPAQWQCDNEFDCEMGEDEMKC 50 (1332)
Q Consensus 12 ~~~c~~~~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE~~C 50 (1332)
...|.+.+|+|. +++|||..|+|||..||.|||||.+|
T Consensus 3 ~~~C~~~~F~C~-~g~CI~~~~~CDG~~DC~DgSDE~~c 40 (45)
T 1d2l_A 3 PPQCQPGEFACA-NSRCIQERWKCDGDNDCLDNSDEAPA 40 (45)
T ss_dssp CCBTTBTCEEET-TTEEECGGGTTTSSCTTTTCSTTSTT
T ss_pred CCcCCCCceEcC-CCCeEehhhccCCCCCCCCCCCCCCC
Confidence 347999999998 89999999999999999999999987
No 106
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=99.00 E-value=8.2e-11 Score=93.70 Aligned_cols=37 Identities=32% Similarity=0.816 Sum_probs=35.1
Q ss_pred cCCCCCceecCCCCceEeCCcCcCCCCCCCCCCCCCCC
Q psy5806 13 LQEIPQYKKCNRTGACIPAQWQCDNEFDCEMGEDEMKC 50 (1332)
Q Consensus 13 ~~c~~~~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE~~C 50 (1332)
..|.+.||+|. +|+|||..|+|||+.||.|||||.+|
T Consensus 5 ~~C~~~~F~C~-nG~CIp~~~~CDG~~DC~DgSDE~~~ 41 (52)
T 2m0p_A 5 ASCLDTQYTCD-NHQCISKNWVCDTDNDCGDGSDEKNC 41 (52)
T ss_dssp CSSCSSEEECT-TCCEEETTSTTSSSCSSSSCHHHHSC
T ss_pred CCCCCCceECC-CCCEEecCccCCCCCCCCCCCccccc
Confidence 46999999998 89999999999999999999999988
No 107
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.99 E-value=1.5e-10 Score=90.06 Aligned_cols=38 Identities=39% Similarity=0.942 Sum_probs=35.8
Q ss_pred CCCCCCCCEEecCCCEEEeeeecCCCCCCCCCCCcccc
Q psy5806 56 PKKCSPDEHRCTTGHCILKTWLCDGIPDCSLGEDERNC 93 (1332)
Q Consensus 56 ~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~C 93 (1332)
+..|.+.+|+|.+|+||+..|+|||..||.|||||.+|
T Consensus 3 ~~~C~~~~F~C~~g~CI~~~~~CDG~~DC~DgSDE~~c 40 (45)
T 1d2l_A 3 PPQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPA 40 (45)
T ss_dssp CCBTTBTCEEETTTEEECGGGTTTSSCTTTTCSTTSTT
T ss_pred CCcCCCCceEcCCCCeEehhhccCCCCCCCCCCCCCCC
Confidence 45789999999999999999999999999999999887
No 108
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=98.99 E-value=2e-10 Score=88.93 Aligned_cols=40 Identities=25% Similarity=0.530 Sum_probs=36.2
Q ss_pred cccCCCCCceecCCCCceEeCCcCcCCCCCCCCCCCCCCC
Q psy5806 11 GYLQEIPQYKKCNRTGACIPAQWQCDNEFDCEMGEDEMKC 50 (1332)
Q Consensus 11 ~~~~c~~~~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE~~C 50 (1332)
....|.+.+|+|.+.++|||..|+|||..||.|||||.+|
T Consensus 3 ~~~~C~~~~f~C~~~g~CI~~~~~CDg~~DC~DgSDE~~C 42 (43)
T 2jm4_A 3 QDVKCSLGYFPCGNITKCLPQLLHCNGVDDCGNQADEDNC 42 (43)
T ss_dssp CSCSCCTTEEECSSSSCEEEGGGTTSSCCCSSSCCTTSSC
T ss_pred cCCCCCCCeeECCCCCeEcCHhhccCCCCCCCCCcccCCC
Confidence 3467999999998338999999999999999999999998
No 109
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.99 E-value=1.3e-07 Score=111.77 Aligned_cols=241 Identities=12% Similarity=-0.016 Sum_probs=143.4
Q ss_pred EEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeC---------CCCeEEEEECCCCCCceeEeec-C-----C
Q psy5806 1024 IRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADM---------RSGNLRTFDMSDSTRIKPIPLM-N-----D 1088 (1332)
Q Consensus 1024 i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~---------~~~~I~~~~l~~g~~~~~i~~~-~-----~ 1088 (1332)
|..++.+.. .++..++....+ ++.+++.+++||+++. ..+.|..+++........+... . .
T Consensus 49 v~v~D~~t~---~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g 124 (373)
T 2mad_H 49 QWVLDAGSG---SILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVG 124 (373)
T ss_pred EEEEECCCC---eEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccC
Confidence 455555432 233334444457 9999999999999984 3567999997644333333211 0 2
Q ss_pred CCceeeEEEecCCeEEEEcCC-CceEEEEeeCC-ceEEEEecCCCCceEEEEcCCCcEEEEEecCCCC-------C----
Q psy5806 1089 TIRDNFVIDWVANNIYYIDSQ-MHTINVARSDG-QHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYD-------N---- 1155 (1332)
Q Consensus 1089 ~~p~glAvDw~~~~LY~td~~-~~~I~v~~ldG-~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~-------~---- 1155 (1332)
..|.++++++.++.||+++.. .+.|.+++ +. +....+ +..|..+.+.|....+|++.+.... .
T Consensus 125 ~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~---i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~ 200 (373)
T 2mad_H 125 PYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQL---LSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAG 200 (373)
T ss_pred CCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEE---cCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEE
Confidence 469999999999999999875 67899998 63 332220 1122223333322222222221100 0
Q ss_pred ------------------------------CCCCcEEEEecCCCceEEEEec---------CCCCcce---EEEecCCCE
Q psy5806 1156 ------------------------------SPTTKIEKVYLDGSYRTVLVEE---------DLAFPNE---LAIDFKQRR 1193 (1332)
Q Consensus 1156 ------------------------------~~~~~I~r~~ldG~~~~~l~~~---------~l~~p~g---laiD~~~~~ 1193 (1332)
...+.++.+++.+...+++-.- .-..|.| +++++++++
T Consensus 201 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~ 280 (373)
T 2mad_H 201 AGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDG 280 (373)
T ss_pred EEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCE
Confidence 0012345555544322211100 0013666 899999999
Q ss_pred EEEEEc---------CCCeEEEEecCCCceEEEEe-ecccceEEEecCCcccccc-EEEEEECCCCEEEEEEecCCCCcc
Q psy5806 1194 LFWADS---------TNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIV-ELYWTDWEAMSVVIAREKSDTGQW 1262 (1332)
Q Consensus 1194 LY~~d~---------~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~-~lYwtd~~~~~V~~~~~~~g~~~~ 1262 (1332)
||++.. ..+.|..+|........-+. ...|.+|++ ++++. .||.+++.++.|..+|..++ +
T Consensus 281 lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~-----s~Dg~~~l~v~~~~~~~V~ViD~~t~---~ 352 (373)
T 2mad_H 281 IYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISV-----AQDGGPDLYALSAGTEVLHIYDAGAG---D 352 (373)
T ss_pred EEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEE-----CCCCCeEEEEEcCCCCeEEEEECCCC---C
Confidence 999864 24689999997554433345 667999999 44566 79999989999999999888 5
Q ss_pred eEEEEecCCCCeeeEEEE
Q psy5806 1263 DVHLIRSNQEDFLNIKAI 1280 (1332)
Q Consensus 1263 ~~~~~~~~~~~~~~i~~~ 1280 (1332)
.+..+..--..|..|.++
T Consensus 353 vv~~i~~vG~~P~~~~~~ 370 (373)
T 2mad_H 353 QDQSTVELGSGPQVLSVM 370 (373)
T ss_pred EEeeecCCCCCCcEEEEc
Confidence 554432222455555543
No 110
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=98.99 E-value=1.9e-10 Score=89.51 Aligned_cols=38 Identities=32% Similarity=0.698 Sum_probs=34.0
Q ss_pred ccCCCCCceecCCCCceEeCCcCcCCCCCCCCCCCCCCC
Q psy5806 12 YLQEIPQYKKCNRTGACIPAQWQCDNEFDCEMGEDEMKC 50 (1332)
Q Consensus 12 ~~~c~~~~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE~~C 50 (1332)
...|.+.+|+|. +++|||..|+|||..||.|||||.+|
T Consensus 5 ~~~C~~~~f~C~-~g~CI~~~~~CDg~~DC~DgSDE~~C 42 (44)
T 3a7q_B 5 AKECEKDQFQCR-NERCIPSVWRCDEDDDCLDHSDEDDC 42 (44)
T ss_dssp ---CCTTEEECT-TSCEEEGGGTTSSSCCSSSSTTTSCC
T ss_pred CCCCCCCceEcC-CCCEeChhhccCCCCCCCCCccccCC
Confidence 357999999998 79999999999999999999999998
No 111
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=98.97 E-value=3e-10 Score=90.59 Aligned_cols=42 Identities=40% Similarity=0.904 Sum_probs=37.5
Q ss_pred CCCCCCCCEEec-CCCEEEeeeecCCCCCCCCCCCcccccccCC
Q psy5806 56 PKKCSPDEHRCT-TGHCILKTWLCDGIPDCSLGEDERNCNKTCD 98 (1332)
Q Consensus 56 ~~~C~~~~f~C~-~g~Ci~~~~~CDg~~DC~DgsDE~~C~~~C~ 98 (1332)
+..|.+.+|+|. +|+||+..|+|||..||.|||||.+|.. |.
T Consensus 4 ~~~C~~~~F~C~~~g~CI~~~~~CDG~~DC~DgSDE~~C~~-C~ 46 (50)
T 2knx_A 4 GKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAG-CL 46 (50)
T ss_dssp TCTTCTTEEEETTTTEEEETTTTTSSSCCSTTCGGGSGGGT-CC
T ss_pred CCCCCCCcEEcCCCCeEcChhhcCCCCCCCCCCCccccccC-CC
Confidence 457899999995 9999999999999999999999999853 55
No 112
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.97 E-value=2e-07 Score=102.94 Aligned_cols=205 Identities=9% Similarity=0.055 Sum_probs=146.8
Q ss_pred eecccc-cceeEEeecCCCceEEEEecCCCceEEEecCCCCceEEEeCCCCCccceeEecCCCeEEEEeCCCCeEEEEeC
Q psy5806 733 LPLRQL-KMVASVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVVNDLNRTESIAVDAIGRKIYWTDMNAQTIMVSDI 811 (1332)
Q Consensus 733 ~~~~~~-~~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~l 811 (1332)
.|++++ .++.+++||+.+++||......+.|++++++|.....+-..+...++|||++..+ .+|+++...+++.+..+
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g-~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDN-QFVISDERDYAIYVISL 98 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTT-EEEEEETTTTEEEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCC-EEEEEECCCCcEEEEEc
Confidence 366666 5799999999999999876678999999999766666655677899999999444 57788888899999887
Q ss_pred CCCce-EEE--EecCC-CCC-----eEEEEeCCCCeEEEEecccCcCCCCceEEEe--cCCCCcEEEec-----c--ccc
Q psy5806 812 DGKNA-KVL--FWLNL-YRP-----RSIVVHYGLGLMVWADWSRTRLTNNRIEMAH--MDGTNRAVFET-----E--VIW 873 (1332)
Q Consensus 812 dG~~~-~~l--~~~~~-~~P-----~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~--~dG~~~~~l~~-----~--l~~ 873 (1332)
+.... .++ ....+ ..| .|||+||..+.||.+.-... ..|.+.. +.+...+++-. . +..
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p----~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d 174 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNP----IEVYKVNGLLSSNELHISKDKALQRQFTLDD 174 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSS----EEEEEEESTTCSSCCEEEECHHHHHTCCSSC
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCC----ceEEEEcccccCCceeeecchhhccccccCC
Confidence 54321 111 11112 234 89999999888988763322 2566665 12222344321 1 557
Q ss_pred CceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEe-c--------cCCcceEEEEe-CCEEEEEeCCCCEEEEEECC
Q psy5806 874 PSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAY-A--------VQSHPYTLTVL-DYYVYWTDVQHSKIYRANKY 943 (1332)
Q Consensus 874 P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~-~--------~~~~P~~la~~-~~~iywtD~~~~~i~~~~~~ 943 (1332)
+.+|++|+.+ ++||........|..+|.+|.-+..+. . .+.+|-|||++ ++.||.+.-. +.+++..|.
T Consensus 175 ~S~l~~dp~t-g~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~-n~~y~f~~~ 252 (255)
T 3qqz_A 175 VSGAEFNQQK-NTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP-NRFYRFTPQ 252 (255)
T ss_dssp CCEEEEETTT-TEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT-TEEEEEEC-
T ss_pred ceeEEEcCCC-CeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC-ceEEEEEec
Confidence 8999999999 999999999999999999998444432 1 24689999999 5689999544 588887665
Q ss_pred C
Q psy5806 944 D 944 (1332)
Q Consensus 944 ~ 944 (1332)
.
T Consensus 253 ~ 253 (255)
T 3qqz_A 253 S 253 (255)
T ss_dssp -
T ss_pred C
Confidence 3
No 113
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=98.94 E-value=2.7e-10 Score=90.16 Aligned_cols=39 Identities=46% Similarity=1.160 Sum_probs=34.9
Q ss_pred CCCCCCCCEEec-----CCCEEEeeeecCCCCCCCCCCCccccc
Q psy5806 56 PKKCSPDEHRCT-----TGHCILKTWLCDGIPDCSLGEDERNCN 94 (1332)
Q Consensus 56 ~~~C~~~~f~C~-----~g~Ci~~~~~CDg~~DC~DgsDE~~C~ 94 (1332)
...|.+.+|+|. +++|||..|+|||..||.|||||.+|+
T Consensus 4 ~~~C~~~~F~C~~~~~~~g~CIp~~~~CDG~~DC~DgSDE~~C~ 47 (47)
T 1k7b_A 4 FGSCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGCG 47 (47)
T ss_dssp --CCSTTEECCSSCTTSCCCCEEGGGSSCSSCCSSSSTTTGGGC
T ss_pred CCCCCCCceEcCCCCCCCCcCCCccccCCCcCCCCCCcccCCCC
Confidence 356899999998 789999999999999999999999984
No 114
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.93 E-value=4.1e-06 Score=104.08 Aligned_cols=346 Identities=9% Similarity=-0.002 Sum_probs=207.5
Q ss_pred EeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEecccccCceeEEeCCCCCeEEEEeCCCCeEEEEccC---CCcee
Q psy5806 832 VHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFETEVIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLA---TGRAK 908 (1332)
Q Consensus 832 vdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~~l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~d---G~~~~ 908 (1332)
+|| .+++|+++.+.+ +|...+.+......-+.....|.+++++.++ ++||.+.. .+.|..+|+. +....
T Consensus 163 ~d~-~~~~~V~~~~~~-----~V~viD~~t~~v~~~i~~g~~p~~v~~SpDG-r~lyv~~~-dg~V~viD~~~~t~~~v~ 234 (567)
T 1qks_A 163 WDL-ENLFSVTLRDAG-----QIALIDGSTYEIKTVLDTGYAVHISRLSASG-RYLFVIGR-DGKVNMIDLWMKEPTTVA 234 (567)
T ss_dssp CCG-GGEEEEEETTTT-----EEEEEETTTCCEEEEEECSSCEEEEEECTTS-CEEEEEET-TSEEEEEETTSSSCCEEE
T ss_pred cCC-CceEEEEeCCCC-----eEEEEECCCCeEEEEEeCCCCccceEECCCC-CEEEEEcC-CCeEEEEECCCCCCcEeE
Confidence 444 367888876544 5666555432222112223467899999999 99999874 5789999994 32222
Q ss_pred EEeccCCcceEEEEe------CCEEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccc
Q psy5806 909 RAYAVQSHPYTLTVL------DYYVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHL 982 (1332)
Q Consensus 909 ~l~~~~~~P~~la~~------~~~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshl 982 (1332)
.+ .....|.++++. +.++|.++...++|..++..+.+.+.. +. ..
T Consensus 235 ~i-~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~---------i~----~~--------------- 285 (567)
T 1qks_A 235 EI-KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKI---------QS----TR--------------- 285 (567)
T ss_dssp EE-ECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEE---------EE----CC---------------
T ss_pred EE-ecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEE---------Ee----cc---------------
Confidence 22 235679999987 458999988888877655443322220 00 00
Q ss_pred cccCCCCccccCCCCeeEccCCccccccCcceEEEEeecceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEE
Q psy5806 983 CLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFA 1062 (1332)
Q Consensus 983 Cl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~s 1062 (1332)
....+... ..|-+ .+.++...+.+..+|++
T Consensus 286 -------------------------------------------~~~~~~~~----~~p~~---rva~i~~s~~~~~~vv~ 315 (567)
T 1qks_A 286 -------------------------------------------GMTYDEQE----YHPEP---RVAAILASHYRPEFIVN 315 (567)
T ss_dssp -------------------------------------------EECTTTCC----EESCC---CEEEEEECSSSSEEEEE
T ss_pred -------------------------------------------cccccccc----ccCCC---ceEEEEEcCCCCEEEEE
Confidence 00000000 00000 12233333333445555
Q ss_pred eCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCce-EEEEec-C-CCCc-eEEE-
Q psy5806 1063 DMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQH-KKILVN-D-LMEP-LAIA- 1137 (1332)
Q Consensus 1063 d~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~-~~~~~~-~-~~~P-~~ia- 1137 (1332)
....|.|..++..+.....+........|.++++|..++.+|+++...+.|.++|+.... ...+.. + ..+| +++.
T Consensus 316 ~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~ 395 (567)
T 1qks_A 316 VKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF 395 (567)
T ss_dssp ETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE
T ss_pred ecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee
Confidence 556677777775532222221112234688999999999999999889999999998433 333433 2 2334 4665
Q ss_pred EcCCCcEEEEEecCCCCCCCCCcEEEEecCCCc-------eEEEEecCCCCcceEEEecCCCEEEEEEcC------CCeE
Q psy5806 1138 VYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSY-------RTVLVEEDLAFPNELAIDFKQRRLFWADST------NKRI 1204 (1332)
Q Consensus 1138 vdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~-------~~~l~~~~l~~p~glaiD~~~~~LY~~d~~------~~~I 1204 (1332)
++|..|.+|.|.... ...|..++.+... ....+...-..+..|.+.++++.||++... .++|
T Consensus 396 ~~p~~g~v~~t~~~g-----~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v 470 (567)
T 1qks_A 396 VHPTFGPVWATSHMG-----DDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSV 470 (567)
T ss_dssp EETTTEEEEEEEBSS-----SSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCE
T ss_pred ECCCCCcEEEeCCCC-----CCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceE
Confidence 588778888775322 2678888887521 112222221334558889899999987742 3589
Q ss_pred EEEecCCC-----ce--EEEE--------e-ecccceEEEecCCccccccEEEEEECC----CCEEEEEEecCCCCcceE
Q psy5806 1205 EYCDFFGR-----SR--KIVI--------S-KVAPYGLSVRQSPGKAFIVELYWTDWE----AMSVVIAREKSDTGQWDV 1264 (1332)
Q Consensus 1205 ~~~d~dG~-----~~--~~~~--------~-~~~P~glav~~~~~~~~~~~lYwtd~~----~~~V~~~~~~~g~~~~~~ 1264 (1332)
..+|.+.. .. +++- . +.+|..+.+ +..+.+||++.|+ .+.|..+|..++ +..
T Consensus 471 ~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~G~~~~~s~~~~~~~~~~i~v~D~~t~---~~~ 542 (567)
T 1qks_A 471 AVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEF-----NKDGTEVWFSVWNGKDQESALVVVDDKTL---ELK 542 (567)
T ss_dssp EEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEE-----CTTSSEEEEEEECCTTSCCEEEEEETTTT---EEE
T ss_pred EEEECCcccccccCCCcEEeccccccccCCCCcceEeeeE-----CCCCCEEEEEeecCCCCCCcEEEEECCCc---eEE
Confidence 99988633 22 2331 1 467888888 6678899999984 799999998888 555
Q ss_pred EEEec-CCCCeeeE
Q psy5806 1265 HLIRS-NQEDFLNI 1277 (1332)
Q Consensus 1265 ~~~~~-~~~~~~~i 1277 (1332)
.++.. .+..|.++
T Consensus 543 ~~i~~~~~~~P~g~ 556 (567)
T 1qks_A 543 HVIKDERLVTPTGK 556 (567)
T ss_dssp EEECCTTCCSEEEE
T ss_pred EEeCCCcccCCCee
Confidence 55542 34555554
No 115
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.93 E-value=2.6e-07 Score=106.21 Aligned_cols=201 Identities=10% Similarity=0.004 Sum_probs=138.3
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCC----CCceeeEEEecCCeEEEEcC-----------CC
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMND----TIRDNFVIDWVANNIYYIDS-----------QM 1110 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~----~~p~glAvDw~~~~LY~td~-----------~~ 1110 (1332)
.+.++++++.++.+|+++...+.|..+++.++.....+..... ..|.++++++.++.||+++. ..
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 4788999999999999998889999999875543333322111 16899999998999999962 24
Q ss_pred ceEEEEeeCCceE-EEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCc-------------------
Q psy5806 1111 HTINVARSDGQHK-KILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSY------------------- 1170 (1332)
Q Consensus 1111 ~~I~v~~ldG~~~-~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~------------------- 1170 (1332)
+.|.++++++... ..+.. ...|.+++++|...+||+++ + .|...++....
T Consensus 115 ~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~-~--------~i~~~d~~~~~~~~~~~~~~~~~~~~~s~d 184 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLG-R--------DLHVMDPEAGTLVEDKPIQSWEAETYAQPD 184 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEES-S--------SEEEEETTTTEEEEEECSTTTTTTTBCCCB
T ss_pred ceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEeC-C--------eEEEEECCCCcEeeeeeccccCCCceeCCC
Confidence 7899999975433 33433 35799999999877788873 1 13333332211
Q ss_pred ----------------------------------------------eEEE-EecCCCCcceEEEecCCCEEEEEEcCCCe
Q psy5806 1171 ----------------------------------------------RTVL-VEEDLAFPNELAIDFKQRRLFWADSTNKR 1203 (1332)
Q Consensus 1171 ----------------------------------------------~~~l-~~~~l~~p~glaiD~~~~~LY~~d~~~~~ 1203 (1332)
...+ +...-..|.++++++++++||.+ .+.
T Consensus 185 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~ 261 (337)
T 1pby_B 185 VLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA---YNV 261 (337)
T ss_dssp CCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE---ESE
T ss_pred ccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe---CCe
Confidence 1100 11111356779999999999998 378
Q ss_pred EEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEe
Q psy5806 1204 IEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIR 1268 (1332)
Q Consensus 1204 I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~ 1268 (1332)
|..+|++.......+. ...|.++++ ++.+.+||++ ...+.|..++..++ +.+..+.
T Consensus 262 v~~~d~~~~~~~~~~~~~~~~~~~~~-----s~dg~~l~~~-~~~~~i~v~d~~~~---~~~~~~~ 318 (337)
T 1pby_B 262 LESFDLEKNASIKRVPLPHSYYSVNV-----STDGSTVWLG-GALGDLAAYDAETL---EKKGQVD 318 (337)
T ss_dssp EEEEETTTTEEEEEEECSSCCCEEEE-----CTTSCEEEEE-SBSSEEEEEETTTC---CEEEEEE
T ss_pred EEEEECCCCcCcceecCCCceeeEEE-----CCCCCEEEEE-cCCCcEEEEECcCC---cEEEEEE
Confidence 9999987654444444 678999999 4456688888 55789999998887 5544443
No 116
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.92 E-value=1.2e-07 Score=109.56 Aligned_cols=201 Identities=12% Similarity=0.131 Sum_probs=146.4
Q ss_pred ccceeEEeecCCCceEEEEecCCCceEEEecCCCCceEEEeCCCCCccceeEecCCCeEEEEeCCC----CeEEEEeCCC
Q psy5806 738 LKMVASVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVVNDLNRTESIAVDAIGRKIYWTDMNA----QTIMVSDIDG 813 (1332)
Q Consensus 738 ~~~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~~~~p~glAvD~~~~nLYwtD~~~----~~I~v~~ldG 813 (1332)
...+.++++|+. ++|||++...+.|+++++++.....+.......|.+|++|..+ +||+++... ..|.+.++++
T Consensus 44 ~~~~~~~~~~~~-g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 44 GLQLEGLNFDRQ-GQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp CCCEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTS
T ss_pred CccccCcEECCC-CCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCC
Confidence 445678888864 6799999988999999987766555554445679999999765 599998766 6899999887
Q ss_pred CceEEEEe--cCCCCCeEEEEeCCCCeEEEEecccC-cCCCCceEEEecCCCCcEEEecccccCceeEEeCCCCCeEEEE
Q psy5806 814 KNAKVLFW--LNLYRPRSIVVHYGLGLMVWADWSRT-RLTNNRIEMAHMDGTNRAVFETEVIWPSCLAIDYSDNPKLYWV 890 (1332)
Q Consensus 814 ~~~~~l~~--~~~~~P~~Iavdp~~g~lywtd~g~~-~~~~~~I~r~~~dG~~~~~l~~~l~~P~gl~iD~~~~~~lYw~ 890 (1332)
.....++. .....|.+|+++|. |.+|+++.... ......|.+...++.....+...+..|++++++.++ +.||++
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg-~~l~v~ 199 (333)
T 2dg1_A 122 DNLQDIIEDLSTAYCIDDMVFDSK-GGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDE-KVLWVT 199 (333)
T ss_dssp CSCEEEECSSSSCCCEEEEEECTT-SCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTS-SEEEEE
T ss_pred CEEEEEEccCccCCcccceEECCC-CCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCC-CEEEEE
Confidence 66553332 12356999999996 89999876320 000146888887765544454446779999999988 789999
Q ss_pred eCCCCeEEEEcc--CCCceeEEe-----c--cCCcceEEEEe-CCEEEEEeCCCCEEEEEEC
Q psy5806 891 DTSKHTIEYKTL--ATGRAKRAY-----A--VQSHPYTLTVL-DYYVYWTDVQHSKIYRANK 942 (1332)
Q Consensus 891 d~~~~~I~~~~~--dG~~~~~l~-----~--~~~~P~~la~~-~~~iywtD~~~~~i~~~~~ 942 (1332)
+...+.|..+++ +|.....+. . ....|.++++. ++.||.++...+.|.+.+.
T Consensus 200 ~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 200 ETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp EGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred eCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 988889999998 454333221 1 12478899998 5688888888889998876
No 117
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.92 E-value=3.4e-07 Score=113.83 Aligned_cols=229 Identities=10% Similarity=0.018 Sum_probs=158.4
Q ss_pred CcceEEEEee--cceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEEC--CCCCCceeEeec
Q psy5806 1011 TREFLLYTSR--FGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDM--SDSTRIKPIPLM 1086 (1332)
Q Consensus 1011 p~~~ll~~~~--~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l--~~g~~~~~i~~~ 1086 (1332)
|...++++.. +. |..++.+.. .++..++....+.+++|++.+++||.++.. +.|..+++ .++.....+ .
T Consensus 147 p~~~~~vs~~~d~~-V~v~D~~t~---~~~~~i~~g~~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~~~~i--~ 219 (543)
T 1nir_A 147 LPNLFSVTLRDAGQ-IALVDGDSK---KIVKVIDTGYAVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTKVAEI--K 219 (543)
T ss_dssp GGGEEEEEEGGGTE-EEEEETTTC---CEEEEEECSTTEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCEEEEEE--E
T ss_pred CCCEEEEEEcCCCe-EEEEECCCc---eEEEEEecCcccceEEECCCCCEEEEECCC-CeEEEEECcCCCCcEEEEE--e
Confidence 3445555543 33 666665433 223333322237899999999999999966 99999998 433222222 2
Q ss_pred CCCCceeeEEEe----cCCeEEEEcCCCceEEEEeeC-CceEEEEec-C----------CCCceEEEEcCCCcEEEEEec
Q psy5806 1087 NDTIRDNFVIDW----VANNIYYIDSQMHTINVARSD-GQHKKILVN-D----------LMEPLAIAVYPRRGLLFYSHW 1150 (1332)
Q Consensus 1087 ~~~~p~glAvDw----~~~~LY~td~~~~~I~v~~ld-G~~~~~~~~-~----------~~~P~~iavdp~~g~Lywtd~ 1150 (1332)
....|.+||+++ .++.||+++...+.|.+++.. ++...++.. + ..+|.+|+++|..+.+|++..
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 345799999998 899999999888899999876 444444432 1 136789999998889998886
Q ss_pred CCCCCCCCCcEEEEecCCCceEE--EEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe---eccc-c
Q psy5806 1151 GLYDNSPTTKIEKVYLDGSYRTV--LVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS---KVAP-Y 1224 (1332)
Q Consensus 1151 ~~~~~~~~~~I~r~~ldG~~~~~--l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~---~~~P-~ 1224 (1332)
.. ++|..+++....... .+.. -.+|.++++|+++++||.+....++|..+|.........+. ..|| .
T Consensus 300 ~~------g~i~vvd~~~~~~l~~~~i~~-~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~ 372 (543)
T 1nir_A 300 ET------GKVLLVNYKDIDNLTVTSIGA-APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGR 372 (543)
T ss_dssp TT------TEEEEEECTTSSSCEEEEEEC-CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTT
T ss_pred CC------CeEEEEEecCCCcceeEEecc-CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCC
Confidence 55 789999886533211 2232 36799999999999999999889999999987544333333 3355 3
Q ss_pred eEEEecCCccccccEEEEEEC-CCCEEEEEEecC
Q psy5806 1225 GLSVRQSPGKAFIVELYWTDW-EAMSVVIAREKS 1257 (1332)
Q Consensus 1225 glav~~~~~~~~~~~lYwtd~-~~~~V~~~~~~~ 1257 (1332)
+..+ .++.++.+|++.. ..++|..++..+
T Consensus 373 g~~~----~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 373 GANF----VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp CEEE----EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred Cccc----CCCCCccEEEeccCCCceEEEEEeCC
Confidence 5544 0123588999986 678999999877
No 118
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.92 E-value=7.7e-07 Score=102.74 Aligned_cols=256 Identities=12% Similarity=0.015 Sum_probs=165.2
Q ss_pred EEEeCCCCCccceeEecCCCeEEEEeCCCCeEEEEeCC-CCceEEEE-----ecCCCCCeEEEEeCC---CCeEEEEecc
Q psy5806 775 RLVVNDLNRTESIAVDAIGRKIYWTDMNAQTIMVSDID-GKNAKVLF-----WLNLYRPRSIVVHYG---LGLMVWADWS 845 (1332)
Q Consensus 775 ~vi~~~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ld-G~~~~~l~-----~~~~~~P~~Iavdp~---~g~lywtd~g 845 (1332)
+++.+++..|.+||+...++ ||+++....+|.+.+.+ |+...+.. ..+..-|.+||++|. +|+||++...
T Consensus 25 ~~va~gL~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~ 103 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTS 103 (347)
T ss_dssp EEEECCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEEC
T ss_pred EEeecCCCCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEec
Confidence 35678899999999998765 99999988899999875 44322211 234567899999994 7999986432
Q ss_pred cCcCCCCceEEEecCCC--------CcEEEecc-----cccCceeEEeCCCCCeEEEEeC-------------CCCeEEE
Q psy5806 846 RTRLTNNRIEMAHMDGT--------NRAVFETE-----VIWPSCLAIDYSDNPKLYWVDT-------------SKHTIEY 899 (1332)
Q Consensus 846 ~~~~~~~~I~r~~~dG~--------~~~~l~~~-----l~~P~gl~iD~~~~~~lYw~d~-------------~~~~I~~ 899 (1332)
.. ..+|.|..+++. ..++|+.. ...+..|+++.++ +||++.. ..++|.+
T Consensus 104 ~~---~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG--~Lyvt~Gd~~~~~~~qd~~~~~G~IlR 178 (347)
T 3das_A 104 AS---DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK--MLYAGTGESGDTGLSQDRKSLGGKILR 178 (347)
T ss_dssp SS---SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTS--CEEEECBCTTCGGGTTCTTCSTTCEEE
T ss_pred CC---CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCC--CEEEEECCCCCCccccCCCCCCCEEEE
Confidence 11 148999988872 24555543 2345579999876 8999842 3689999
Q ss_pred EccCCC--------ceeEEeccCCcceEEEEe-CCEEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCC
Q psy5806 900 KTLATG--------RAKRAYAVQSHPYTLTVL-DYYVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPN 970 (1332)
Q Consensus 900 ~~~dG~--------~~~~l~~~~~~P~~la~~-~~~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n 970 (1332)
++.+|+ ..+++...+..|++++++ .+.||.+|........++ .+......+ +-
T Consensus 179 i~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln-----------------~i~~G~nyG-wP 240 (347)
T 3das_A 179 MTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELN-----------------AIKPGDNYG-WP 240 (347)
T ss_dssp ECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEE-----------------EECTTCBCC-TT
T ss_pred EeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceee-----------------EEcCCCEec-CC
Confidence 999998 556666688899999998 578999987653322211 111111111 22
Q ss_pred cccCCCCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEEeecceEEEEeCCCCCCCCcccccCCccceEEE
Q psy5806 971 ACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFF 1050 (1332)
Q Consensus 971 ~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~i 1050 (1332)
.|.. . ..+ .++. .+... ++ +....|.|+
T Consensus 241 ~~~g---~-------------~~~-~~~~------------~P~~~----------------------~~-~~~~ap~G~ 268 (347)
T 3das_A 241 EAEG---K-------------GGG-SGFH------------DPVAQ----------------------WS-TDEASPSGI 268 (347)
T ss_dssp TCCS---S-------------CCC-TTCC------------CCSEE----------------------EC-TTTCCEEEE
T ss_pred cccC---C-------------CCC-cccc------------CCcEe----------------------cC-CCCCCCcce
Confidence 2210 0 000 0000 00000 00 111247888
Q ss_pred EEeCCCcEEEEEeCCCCeEEEEECCCCC---CceeEeecCCCCceeeEEEecCCeEEEEcCC
Q psy5806 1051 DYHYSKNLIYFADMRSGNLRTFDMSDST---RIKPIPLMNDTIRDNFVIDWVANNIYYIDSQ 1109 (1332)
Q Consensus 1051 d~d~~~~~lY~sd~~~~~I~~~~l~~g~---~~~~i~~~~~~~p~glAvDw~~~~LY~td~~ 1109 (1332)
+|. ++.+|......++|.++.++.+. ..+.++....+.|.++++++ .+.||+++.+
T Consensus 269 ~~~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~p-DG~lyv~td~ 327 (347)
T 3das_A 269 AYA--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAG-GDKLWLVTSN 327 (347)
T ss_dssp EEE--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEE-TTEEEEEECT
T ss_pred EEE--cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECC-CCcEEEEEcC
Confidence 886 47899999999999999987432 12334433357899999996 6799998654
No 119
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=98.92 E-value=1.5e-10 Score=91.73 Aligned_cols=39 Identities=36% Similarity=0.861 Sum_probs=35.9
Q ss_pred ccCCCCCceecCC----CCceEeCCcCcCCCCCCCCCCCCCCC
Q psy5806 12 YLQEIPQYKKCNR----TGACIPAQWQCDNEFDCEMGEDEMKC 50 (1332)
Q Consensus 12 ~~~c~~~~f~C~~----~~~Ci~~~~~CDg~~DC~dgsDE~~C 50 (1332)
...|.+.+|+|.+ ++.|||..|+|||+.||.|||||.+|
T Consensus 2 ~~~C~~~~F~C~~~~~~~~~CIp~~~~CDG~~DC~DgSDE~~C 44 (47)
T 1jrf_A 2 SSRCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGC 44 (47)
T ss_dssp CCCCCCCCSCSSSCSCCCTTTSGGGGSSSSSCCSSSSCTTHHH
T ss_pred CCCCCCCeeECCCCCCCCCeEcCHhhcCCCCcCCCCCcccccC
Confidence 4579999999985 68999999999999999999999988
No 120
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=98.91 E-value=2.8e-10 Score=88.52 Aligned_cols=38 Identities=37% Similarity=0.746 Sum_probs=35.4
Q ss_pred ccCCCCCceecCCCCceEeCCcCcCCCCCCCCCCCCCCC
Q psy5806 12 YLQEIPQYKKCNRTGACIPAQWQCDNEFDCEMGEDEMKC 50 (1332)
Q Consensus 12 ~~~c~~~~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE~~C 50 (1332)
...|.+.+|+|. ++.|||..|+|||..||.|||||.+|
T Consensus 2 ~~~C~~~~F~C~-~g~CI~~~~~CDg~~DC~DgSDE~~~ 39 (44)
T 1j8e_A 2 SHSCSSTQFKCN-SGRCIPEHWTCDGDNDCGDYSDETHA 39 (44)
T ss_dssp CSSSCTTEEECT-TSCEEEGGGTTSSSCCSSSSGGGSHH
T ss_pred CCCCCCCceEeC-CCCeEecCcccCCCCCCCCCCCCCCc
Confidence 457999999998 89999999999999999999999875
No 121
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=98.91 E-value=2.6e-10 Score=86.26 Aligned_cols=36 Identities=47% Similarity=1.062 Sum_probs=33.7
Q ss_pred CCCCCEEecC--CCEEEeeeecCCCCCCCCCCCccccc
Q psy5806 59 CSPDEHRCTT--GHCILKTWLCDGIPDCSLGEDERNCN 94 (1332)
Q Consensus 59 C~~~~f~C~~--g~Ci~~~~~CDg~~DC~DgsDE~~C~ 94 (1332)
|++.+|+|.+ |+|||..|+|||..||.|||||.+|+
T Consensus 1 C~~~~f~C~~~~g~Cip~~~~CDg~~DC~dgsDE~~C~ 38 (39)
T 3dpr_E 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCG 38 (39)
T ss_dssp CCTTTCCCSSSSSCCCCTTSSSSSSCCSTTTTTSTTCC
T ss_pred CCCCceecCCCCCCEeCccccCCCcccCcCCcccccCC
Confidence 6778999997 89999999999999999999999985
No 122
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.90 E-value=7.4e-07 Score=103.10 Aligned_cols=235 Identities=12% Similarity=0.140 Sum_probs=149.8
Q ss_pred EEEecc-cccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEeccCCcceEEEEe-CCEEEEEeCCCCEEEEEEC
Q psy5806 865 AVFETE-VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYAVQSHPYTLTVL-DYYVYWTDVQHSKIYRANK 942 (1332)
Q Consensus 865 ~~l~~~-l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~~~~~P~~la~~-~~~iywtD~~~~~i~~~~~ 942 (1332)
+.+.+. ...+.|.+.|.++ ++|||+|...+.|..++.++...+.+.. -..|.+++.. ++.+|.+. ...|++++.
T Consensus 41 ~~~~~~~~~~~egp~~~~~~-~~l~~~d~~~~~i~~~d~~~~~~~~~~~-~~~v~~i~~~~dg~l~v~~--~~gl~~~d~ 116 (326)
T 2ghs_A 41 RVLDETPMLLGEGPTFDPAS-GTAWWFNILERELHELHLASGRKTVHAL-PFMGSALAKISDSKQLIAS--DDGLFLRDT 116 (326)
T ss_dssp EEEECSCCSBEEEEEEETTT-TEEEEEEGGGTEEEEEETTTTEEEEEEC-SSCEEEEEEEETTEEEEEE--TTEEEEEET
T ss_pred EEeeccCCCCCcCCeEeCCC-CEEEEEECCCCEEEEEECCCCcEEEEEC-CCcceEEEEeCCCeEEEEE--CCCEEEEEC
Confidence 444444 5667899999988 8999999988999999998765544422 2456667665 45555544 223444332
Q ss_pred CCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEEeecc
Q psy5806 943 YDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFG 1022 (1332)
Q Consensus 943 ~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~ 1022 (1332)
.+++
T Consensus 117 ~~g~---------------------------------------------------------------------------- 120 (326)
T 2ghs_A 117 ATGV---------------------------------------------------------------------------- 120 (326)
T ss_dssp TTCC----------------------------------------------------------------------------
T ss_pred CCCc----------------------------------------------------------------------------
Confidence 2221
Q ss_pred eEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCC------CCeEEEEECCCCCCceeEeecCCCCceeeEE
Q psy5806 1023 VIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMR------SGNLRTFDMSDSTRIKPIPLMNDTIRDNFVI 1096 (1332)
Q Consensus 1023 ~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~------~~~I~~~~l~~g~~~~~i~~~~~~~p~glAv 1096 (1332)
+..+.-.... .....+.++.+|+.+ ++|+++.. .+.|++++ + +. ...+ ..+...|.+|++
T Consensus 121 -~~~~~~~~~~--------~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~-~-g~-~~~~-~~~~~~~~~i~~ 186 (326)
T 2ghs_A 121 -LTLHAELESD--------LPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA-K-GK-VTKL-FADISIPNSICF 186 (326)
T ss_dssp -EEEEECSSTT--------CTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE-T-TE-EEEE-EEEESSEEEEEE
T ss_pred -EEEEeeCCCC--------CCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe-C-Cc-EEEe-eCCCcccCCeEE
Confidence 0000000000 001124456666654 36666532 35677776 3 32 2222 234557899999
Q ss_pred EecCCeEEEEcCCCceEEEEeeC---C-ce--EEEEe---cCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecC
Q psy5806 1097 DWVANNIYYIDSQMHTINVARSD---G-QH--KKILV---NDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLD 1167 (1332)
Q Consensus 1097 Dw~~~~LY~td~~~~~I~v~~ld---G-~~--~~~~~---~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ld 1167 (1332)
+..++.|||++...+.|.+++++ | .. +.++. .....|.+|++|+ .|.||++.++. ..|.+.+.+
T Consensus 187 s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~------~~v~~~d~~ 259 (326)
T 2ghs_A 187 SPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGE------GAVDRYDTD 259 (326)
T ss_dssp CTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETT------TEEEEECTT
T ss_pred cCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeCC------CEEEEECCC
Confidence 98899999999888899999985 5 31 22221 1235799999998 68899998875 679999998
Q ss_pred CCceEEEEecCCCCcceEEEe-cCCCEEEEEEcCC
Q psy5806 1168 GSYRTVLVEEDLAFPNELAID-FKQRRLFWADSTN 1201 (1332)
Q Consensus 1168 G~~~~~l~~~~l~~p~glaiD-~~~~~LY~~d~~~ 1201 (1332)
|.....+ ......|.+++++ ++.+.||++....
T Consensus 260 g~~~~~i-~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 260 GNHIARY-EVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp CCEEEEE-ECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred CCEEEEE-ECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 7654443 3334568999998 7888999998765
No 123
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.90 E-value=1.4e-07 Score=104.66 Aligned_cols=183 Identities=11% Similarity=0.093 Sum_probs=129.1
Q ss_pred ceEEEEee----cceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCC
Q psy5806 1013 EFLLYTSR----FGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMND 1088 (1332)
Q Consensus 1013 ~~ll~~~~----~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~ 1088 (1332)
..|+.++. +. |+.|++.+..... ..+++....+.+++++ +++||+++...+.+..++..++.....+- .+
T Consensus 32 g~Lyvstg~~~~s~-v~~iD~~tg~v~~-~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~-~g- 105 (266)
T 2iwa_A 32 DTLFESTGLYGRSS-VRQVALQTGKVEN-IHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFT-HQ- 105 (266)
T ss_dssp TEEEEEECSTTTCE-EEEEETTTCCEEE-EEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEE-CC-
T ss_pred CeEEEECCCCCCCE-EEEEECCCCCEEE-EEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEE-CC-
Confidence 35555543 45 8888876543221 2233333345677776 57999999999999999976443333332 22
Q ss_pred CCceeeEEEecCCeEEEEcCCCceEEEEeeCCce-EEEEecC-----CCCceEEEEcCCCcEEEEEecCCCCCCCCCcEE
Q psy5806 1089 TIRDNFVIDWVANNIYYIDSQMHTINVARSDGQH-KKILVND-----LMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIE 1162 (1332)
Q Consensus 1089 ~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~-~~~~~~~-----~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~ 1162 (1332)
.|+|+++.+.++.||+++ ..+.|.+++.+... ...+..+ +..|++++.. .|.||.+.|.. +.|.
T Consensus 106 -~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~~------~~V~ 175 (266)
T 2iwa_A 106 -MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQT------DCIA 175 (266)
T ss_dssp -SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTS------SEEE
T ss_pred -CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEecCCC------CeEE
Confidence 467777777799999999 57899999987543 2223322 2357888877 57999998876 7899
Q ss_pred EEecCCCceEEEEec-CC------------CCcceEEEecCCCEEEEEEcCCCeEEEEecCC
Q psy5806 1163 KVYLDGSYRTVLVEE-DL------------AFPNELAIDFKQRRLFWADSTNKRIEYCDFFG 1211 (1332)
Q Consensus 1163 r~~ldG~~~~~l~~~-~l------------~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG 1211 (1332)
++++........+.. ++ ..|+||++|+++++||++....++|..+++..
T Consensus 176 vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 176 RISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 999966665555442 22 46899999999999999999999999998854
No 124
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.90 E-value=2e-07 Score=109.16 Aligned_cols=242 Identities=14% Similarity=0.030 Sum_probs=145.6
Q ss_pred EEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeC---------CCCeEEEEECCCCCCceeEeecC------C
Q psy5806 1024 IRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADM---------RSGNLRTFDMSDSTRIKPIPLMN------D 1088 (1332)
Q Consensus 1024 i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~---------~~~~I~~~~l~~g~~~~~i~~~~------~ 1088 (1332)
+..|+.+ ...++..|+....|. +++++.+++||+++. ..+.|..+++.++.....+.... .
T Consensus 61 V~ViD~~---t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g 136 (386)
T 3sjl_D 61 QFVIDGE---AGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVG 136 (386)
T ss_dssp EEEEETT---TTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred EEEEECC---CCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccC
Confidence 5555544 233444455445564 999999999999984 34679999977544444443211 2
Q ss_pred CCceeeEEEecCCeEEEEcCC-CceEEEEeeCCce-EEEEec-C--CCCceE----EEEcCCCcEEEEEecC--C-----
Q psy5806 1089 TIRDNFVIDWVANNIYYIDSQ-MHTINVARSDGQH-KKILVN-D--LMEPLA----IAVYPRRGLLFYSHWG--L----- 1152 (1332)
Q Consensus 1089 ~~p~glAvDw~~~~LY~td~~-~~~I~v~~ldG~~-~~~~~~-~--~~~P~~----iavdp~~g~Lywtd~~--~----- 1152 (1332)
..|.++++++.++.||+++.. .+.|.++|+.... ...+.. + ...|.+ +++.+...++|++... .
T Consensus 137 ~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~ 216 (386)
T 3sjl_D 137 TYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITH 216 (386)
T ss_dssp CCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEE
T ss_pred CCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEee
Confidence 379999999999999999875 6788888886432 222211 0 011222 2444422222222111 0
Q ss_pred ---CC-CC-----------C---------CCcEEEEecCCCceEEEEecCC---------CCcce---EEEecCCCEEEE
Q psy5806 1153 ---YD-NS-----------P---------TTKIEKVYLDGSYRTVLVEEDL---------AFPNE---LAIDFKQRRLFW 1196 (1332)
Q Consensus 1153 ---~~-~~-----------~---------~~~I~r~~ldG~~~~~l~~~~l---------~~p~g---laiD~~~~~LY~ 1196 (1332)
++ +. . .++|+.+++.+...+++-.-.+ -.|.| ++++.++++||+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV 296 (386)
T 3sjl_D 217 TEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYL 296 (386)
T ss_dssp CCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred cceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEE
Confidence 00 00 0 0235555555444322211000 01334 899999999999
Q ss_pred EEc---------CCCeEEEEecCCCceEEEEe-ecccceEEEecCCcccccc-EEEEEECCCCEEEEEEecCCCCcceEE
Q psy5806 1197 ADS---------TNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIV-ELYWTDWEAMSVVIAREKSDTGQWDVH 1265 (1332)
Q Consensus 1197 ~d~---------~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~-~lYwtd~~~~~V~~~~~~~g~~~~~~~ 1265 (1332)
+.. ..++|..+|.....+..-+. +..|.+|++ ++++. +||.+++.++.|..+|..++ +.+.
T Consensus 297 ~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lav-----s~D~~~~ly~tn~~~~~VsViD~~t~---k~~~ 368 (386)
T 3sjl_D 297 LVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINV-----SQDEKPLLYALSTGDKTLYIHDAESG---EELR 368 (386)
T ss_dssp EEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEE-----CSSSSCEEEEEETTTTEEEEEETTTC---CEEE
T ss_pred EeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEE-----CCCCCeEEEEEcCCCCeEEEEECCCC---cEEE
Confidence 864 23689999997655544455 778999999 44443 79999999999999999888 6555
Q ss_pred EEecCCCCeeeEE
Q psy5806 1266 LIRSNQEDFLNIK 1278 (1332)
Q Consensus 1266 ~~~~~~~~~~~i~ 1278 (1332)
.+.. ..++..|.
T Consensus 369 ~i~~-~~~p~~l~ 380 (386)
T 3sjl_D 369 SVNQ-LGHGPQVI 380 (386)
T ss_dssp EECC-CCSSCCEE
T ss_pred EecC-CCCCceeE
Confidence 5443 34555553
No 125
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=98.90 E-value=4.2e-10 Score=89.37 Aligned_cols=39 Identities=33% Similarity=0.881 Sum_probs=36.5
Q ss_pred CCCCCCCEEecCC-CEEEeeeecCCCCCCCCCCCcccccc
Q psy5806 57 KKCSPDEHRCTTG-HCILKTWLCDGIPDCSLGEDERNCNK 95 (1332)
Q Consensus 57 ~~C~~~~f~C~~g-~Ci~~~~~CDg~~DC~DgsDE~~C~~ 95 (1332)
..|.+.+|+|.+| +||+..|+|||..||.|||||.+|+.
T Consensus 5 ~~C~~~~F~C~~g~~CI~~~~~CDG~~DC~DgSDE~~C~~ 44 (48)
T 2i1p_A 5 LNCTSAQFKCADGSSCINSRYRCDGVYDCRDNSDEAGCPT 44 (48)
T ss_dssp CCCCSSSEECSSSSCEECGGGSSSSSCCSSSSHHHHSSCS
T ss_pred CCCCCCeeECCCCCEeCCHhhcCCCCCCCCCCcccccCCC
Confidence 5789999999999 89999999999999999999999864
No 126
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.89 E-value=3.3e-08 Score=115.86 Aligned_cols=228 Identities=9% Similarity=-0.097 Sum_probs=145.0
Q ss_pred EEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeC---------CCCeEEEEECCCCCCceeEeecC------C
Q psy5806 1024 IRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADM---------RSGNLRTFDMSDSTRIKPIPLMN------D 1088 (1332)
Q Consensus 1024 i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~---------~~~~I~~~~l~~g~~~~~i~~~~------~ 1088 (1332)
+.-|+.+ ...++..|+....| ++.+++..++||+++. ..+.|..+++.++.....+...+ .
T Consensus 48 vsvID~~---t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 48 NWVSCAG---CGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEETT---TTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred EEEEECC---CCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 4444443 33444445544567 9999999999999983 36789999987655554443210 2
Q ss_pred CCceeeEEEecCCeEEEEcCC-CceEEE--EeeCCceEEEEec-C-----------------------------------
Q psy5806 1089 TIRDNFVIDWVANNIYYIDSQ-MHTINV--ARSDGQHKKILVN-D----------------------------------- 1129 (1332)
Q Consensus 1089 ~~p~glAvDw~~~~LY~td~~-~~~I~v--~~ldG~~~~~~~~-~----------------------------------- 1129 (1332)
..|.+|++++.++.||+++.. .+.+.+ +|+.. ...+.. +
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~ 201 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGI 201 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEE
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCe
Confidence 479999999999999999875 566777 54422 111110 0
Q ss_pred -----------CCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecC---------CCCcce---EE
Q psy5806 1130 -----------LMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEED---------LAFPNE---LA 1186 (1332)
Q Consensus 1130 -----------~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~---------l~~p~g---la 1186 (1332)
-..|. + .+..+.+||+.. + .|..+++.+...+++-.-. ...|.| ++
T Consensus 202 v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~-~-------~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~ 270 (368)
T 1mda_H 202 VGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA-S-------SILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVA 270 (368)
T ss_dssp CCCCSCTTSCBCSCCE--E-ETTTTEEEECBS-S-------CCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEE
T ss_pred EEEEeeeeeeCCCCcc--c-cccCCEEEEEcC-C-------EEEEEECCCCcceEEEEEEeccccccccccccCcceeeE
Confidence 01122 2 333455555543 2 4777777664433322111 123666 89
Q ss_pred EecCCCEEEEEEc---C-----CCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEEC-CCCEEEEEEec
Q psy5806 1187 IDFKQRRLFWADS---T-----NKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDW-EAMSVVIAREK 1256 (1332)
Q Consensus 1187 iD~~~~~LY~~d~---~-----~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~-~~~~V~~~~~~ 1256 (1332)
+++++++||++.. + .+.+..+|+....+..-+. +..|.+|++ ++++.++|+++. .++.|..+|..
T Consensus 271 ~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~-----s~Dg~~l~va~~~~~~~VsVID~~ 345 (368)
T 1mda_H 271 KLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIA-----AQDGASDNYANSAGTEVLDIYDAA 345 (368)
T ss_dssp EETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEE-----CCSSSCEEEEEETTTTEEEEEESS
T ss_pred EcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEE-----CCCCCEEEEEccCCCCeEEEEECC
Confidence 9999999999865 3 3456688886544433344 678999999 445667999998 79999999998
Q ss_pred CCCCcceEEEEecCCCCeeeE
Q psy5806 1257 SDTGQWDVHLIRSNQEDFLNI 1277 (1332)
Q Consensus 1257 ~g~~~~~~~~~~~~~~~~~~i 1277 (1332)
++ +.+..+.- ...|.+|
T Consensus 346 t~---kvv~~I~v-g~~P~~i 362 (368)
T 1mda_H 346 SD---QDQSSVEL-DKGPESL 362 (368)
T ss_dssp SC---EEEEECCC-CSCCCEE
T ss_pred CC---cEEEEEEC-CCCCCEE
Confidence 88 55444432 2345555
No 127
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=98.89 E-value=5.7e-10 Score=86.81 Aligned_cols=37 Identities=38% Similarity=0.932 Sum_probs=34.8
Q ss_pred CCCCCCCEEecCCCEEEeeeecCCCCCCCCCCCcccc
Q psy5806 57 KKCSPDEHRCTTGHCILKTWLCDGIPDCSLGEDERNC 93 (1332)
Q Consensus 57 ~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~C 93 (1332)
..|++.+|+|.+|.|||..|+|||..||.|||||.+|
T Consensus 3 ~~C~~~~F~C~~g~CI~~~~~CDg~~DC~DgSDE~~~ 39 (44)
T 1j8e_A 3 HSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDETHA 39 (44)
T ss_dssp SSSCTTEEECTTSCEEEGGGTTSSSCCSSSSGGGSHH
T ss_pred CCCCCCceEeCCCCeEecCcccCCCCCCCCCCCCCCc
Confidence 4688999999999999999999999999999999875
No 128
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=98.87 E-value=3.6e-10 Score=89.74 Aligned_cols=38 Identities=37% Similarity=0.884 Sum_probs=35.5
Q ss_pred cCCCCCceecCCCC-ceEeCCcCcCCCCCCCCCCCCCCCC
Q psy5806 13 LQEIPQYKKCNRTG-ACIPAQWQCDNEFDCEMGEDEMKCP 51 (1332)
Q Consensus 13 ~~c~~~~f~C~~~~-~Ci~~~~~CDg~~DC~dgsDE~~C~ 51 (1332)
..|.+.+|+|. ++ +|||..|+|||+.||.|||||.+|+
T Consensus 5 ~~C~~~~F~C~-~g~~CI~~~~~CDG~~DC~DgSDE~~C~ 43 (48)
T 2i1p_A 5 LNCTSAQFKCA-DGSSCINSRYRCDGVYDCRDNSDEAGCP 43 (48)
T ss_dssp CCCCSSSEECS-SSSCEECGGGSSSSSCCSSSSHHHHSSC
T ss_pred CCCCCCeeECC-CCCEeCCHhhcCCCCCCCCCCcccccCC
Confidence 67999999998 66 8999999999999999999999993
No 129
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.87 E-value=0.00082 Score=83.38 Aligned_cols=557 Identities=12% Similarity=0.066 Sum_probs=286.8
Q ss_pred CCCccEEEeccCCeEEEEeCCCCeEEEEeCCCCCcEEEEeCCCCCceEEEEecCCCeEEEEecCCCCceEEEcCCCCceE
Q psy5806 510 KKPAGVAIDWRTNKLYWTESEYNWIEVSNLDGTYPTLLFWQNLSEPRDIAVNPIGGIMYWCSWGDLHKIEMAGMDGSHRH 589 (1332)
Q Consensus 510 ~~p~glAvDw~~~~lYw~d~~~~~I~v~~l~g~~~~~l~~~~~~~P~~iavdp~~G~lywtd~g~~~~I~r~~~dG~~~~ 589 (1332)
....+|||.+.++.|.- -+..+.|.+-+.+|+...++. .......+|++.|...+|.-... ...|..-+++|....
T Consensus 17 ~~V~~~a~spdg~~las-~~~d~~v~iWd~~~~~~~~l~-gh~~~V~~l~fspdg~~las~~~--d~~i~vWd~~~~~~~ 92 (577)
T 2ymu_A 17 SSVRGVAFSPDGQTIAS-ASDDKTVKLWNRNGQLLQTLT-GHSSSVWGVAFSPDGQTIASASD--DKTVKLWNRNGQLLQ 92 (577)
T ss_dssp SCEEEEEECTTSSCEEE-EETTSEEEEECTTSCEEEEEE-CCSSCEEEEEECTTSSEEEEEET--TSCEEEEETTSCEEE
T ss_pred CcEEEEEECCCCCEEEE-EeCCCEEEEEECCCCEEEEEe-CCCCCEEEEEECCCCCEEEEEeC--CCEEEEEECCCCEEE
Confidence 45678888886665544 345678888888887655554 33456789999997555554432 233444446665444
Q ss_pred EEEeCCCCCceeeEEeccCCeEEEEeCCCCeEEEEecCCCceEEEEeecceEEEeeecCceeEEEEeCCCCcCcCCCcCC
Q psy5806 590 ILASDSLKNPTGLAIDLENSRLYWANVGLKTIEFTNLDGTRKQTLIALHHLKVMTKVVGLTDIDIFHRRRSKKTHPCNEN 669 (1332)
Q Consensus 590 ~l~~~~l~~p~glaiD~~~~rLYw~d~~~~~I~~~~~dG~~~~~~~~~~~l~v~~~~~~~~~i~v~~~~~q~~~~pC~~~ 669 (1332)
.+. ..-.....+++.+.+++|..+... +.+...+..+........ .
T Consensus 93 ~~~-~~~~~v~~~~~s~d~~~l~~~~~d-~~~~~~~~~~~~~~~~~~---------------------~----------- 138 (577)
T 2ymu_A 93 TLT-GHSSSVRGVAFSPDGQTIASASDD-KTVKLWNRNGQLLQTLTG---------------------H----------- 138 (577)
T ss_dssp EEC-CCSSCEEEEEECTTSSEEEEEETT-SCEEEEETTCCEEEEECC---------------------C-----------
T ss_pred EEE-CCCCCEEEEEECCCCCEEEEEcCC-CceeecccccceeeeccC---------------------C-----------
Confidence 332 233455778887776665544322 233333322221111100 0
Q ss_pred CCCCccccccCCCCCceeeCCCCccccCCCCccccCCccceEeeccceeEEEecCCCCCcceeeecccccceeEEeecCC
Q psy5806 670 NGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSENPSKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMVASVDVDTK 749 (1332)
Q Consensus 670 nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~~~id~d~~ 749 (1332)
.+ .-.+ ..+.+++ ..+.........++..... ............+..+.+.+.
T Consensus 139 ~~------------~v~~-----~~~~~~~--------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~ 191 (577)
T 2ymu_A 139 SS------------SVWG-----VAFSPDG--------QTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVWGVAFSPD 191 (577)
T ss_dssp SS------------CEEE-----EEECTTS--------SCEEEEETTSEEEEECTTS--CEEEEEECCSSCEEEEEECTT
T ss_pred CC------------ceee-----eeeecCC--------ccceecccccceeccccce--eeeeeccCCCcceeeeeecCC
Confidence 00 0000 0000111 0111111111111111000 000111112334556677766
Q ss_pred CceEEEEecCCCceEEEecCCCCceEEEeCCCCCccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEecCCCCCeE
Q psy5806 750 NEYIYWSDISEKTIERVRFDMTGRERLVVNDLNRTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFWLNLYRPRS 829 (1332)
Q Consensus 750 ~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~~~~~P~~ 829 (1332)
...++ +-...+.|...+.++.....+ ...-..+.++++...++.|+... ..+.|.+.+.+++....+.. ......+
T Consensus 192 ~~~l~-~~~~d~~v~~w~~~~~~~~~~-~~~~~~v~~~~~s~dg~~l~~~~-~d~~i~~w~~~~~~~~~~~~-~~~~v~~ 267 (577)
T 2ymu_A 192 GQTIA-SASDDKTVKLWNRNGQLLQTL-TGHSSSVRGVAFSPDGQTIASAS-DDKTVKLWNRNGQLLQTLTG-HSSSVNG 267 (577)
T ss_dssp SSCEE-EEETTSEEEEECTTSCEEEEE-ECCSSCEEEEEECTTSSCEEEEE-TTSCEEEECTTSCEEEEECC-CSSCEEE
T ss_pred CCEEE-EEcCCCEEEEEeCCCcEEEEE-ecCCCCEEEEEECCCCCEEEEEe-CCCEEEEEeCCCCEEEEEec-CCCCEEE
Confidence 55444 334456676666665443333 33345677889988777666543 45678898888876555432 2345788
Q ss_pred EEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEecccccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeE
Q psy5806 830 IVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFETEVIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKR 909 (1332)
Q Consensus 830 Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~~l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~ 909 (1332)
+++.|....|.-... . ..|...+.+|.....+........++++.+++ +.|.-+. ..+.|...++++.....
T Consensus 268 v~~~~d~~~l~~~~~--d----~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~~-~d~~i~~w~~~~~~~~~ 339 (577)
T 2ymu_A 268 VAFRPDGQTIASASD--D----KTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDG-QTIASAS-DDKTVKLWNRNGQHLQT 339 (577)
T ss_dssp EEECTTSSEEEEEET--T----SCEEEEETTSCEEEEECCCSSCEEEEEECTTS-SEEEEEE-TTSCEEEEETTSCEEEE
T ss_pred EEEcCCCCEEEEEeC--C----CEEEEEeCCCcEEEEEecCCCCeEEEEECCCC-CEEEEEe-CCCeEEEEeCCCCeeEE
Confidence 999987444444332 2 35666666665444433223444567777666 4443332 33445444444433322
Q ss_pred EeccCCcceEEEEeCCEEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCC
Q psy5806 910 AYAVQSHPYTLTVLDYYVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTN 989 (1332)
Q Consensus 910 l~~~~~~P~~la~~~~~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~ 989 (1332)
+........++++.
T Consensus 340 ~~~~~~~v~~~~~s------------------------------------------------------------------ 353 (577)
T 2ymu_A 340 LTGHSSSVWGVAFS------------------------------------------------------------------ 353 (577)
T ss_dssp ECCCSSCEEEEEEC------------------------------------------------------------------
T ss_pred EeCCCCCEEEEEEC------------------------------------------------------------------
Confidence 21111111122211
Q ss_pred ccccCCCCeeEccCCccccccCcceEEEEeecceEEEEeCCCCCCCCcccccC-CccceEEEEEeCCCcEEEEEeCCCCe
Q psy5806 990 FTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLPFP-EYMSSIFFDYHYSKNLIYFADMRSGN 1068 (1332)
Q Consensus 990 ~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~-~~~~~~~id~d~~~~~lY~sd~~~~~ 1068 (1332)
|.|.. |+....+..|+..+... ..+..+. .-..+.+++|++.++.|.... ..+.
T Consensus 354 -----~~g~~---------------l~~~~~dg~v~~~~~~~----~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~d~~ 408 (577)
T 2ymu_A 354 -----PDGQT---------------IASASDDKTVKLWNRNG----QLLQTLTGHSSSVRGVAFSPDGQTIASAS-DDKT 408 (577)
T ss_dssp -----TTSSE---------------EEEEETTSEEEEEETTC----CEEEEEECCSSCEEEEEECTTSSCEEEEE-TTSE
T ss_pred -----CCCCE---------------EEEEeCCCEEEEEcCCC----CEEEEecCCCCCeEEEEECCCCCEEEEEe-CCCE
Confidence 11111 11111111011111100 0000001 112346777777776665544 5566
Q ss_pred EEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEEEecCCCCceEEEEcCCCcEEEEE
Q psy5806 1069 LRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKILVNDLMEPLAIAVYPRRGLLFYS 1148 (1332)
Q Consensus 1069 I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~~~~~~~~P~~iavdp~~g~Lywt 1148 (1332)
|+..+.+ +.....+. .....+.+|++.+.++.|..+ ...+.|.+++++++....+..-.....+++++|...+|..+
T Consensus 409 v~~~~~~-~~~~~~~~-~~~~~v~~~~~s~d~~~l~~~-~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~ 485 (577)
T 2ymu_A 409 VKLWNRN-GQLLQTLT-GHSSSVWGVAFSPDDQTIASA-SDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASA 485 (577)
T ss_dssp EEEECTT-CCEEEEEE-CCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEE
T ss_pred EEEEeCC-CCEEEEec-CCCCCeEEEEECCCCCEEEEE-cCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 7766643 33222222 233456789998777766554 44568999999988776665555678899999965555444
Q ss_pred ecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe-ecccceEE
Q psy5806 1149 HWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS-KVAPYGLS 1227 (1332)
Q Consensus 1149 d~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~-~~~P~gla 1227 (1332)
. .. ..|..-+++|.....+.. .-...+.|++.++++.|.-+. ..+.|...|++|.....+.. .....+|+
T Consensus 486 ~-~d------~~i~iw~~~~~~~~~~~~-h~~~v~~l~~s~dg~~l~s~~-~dg~v~lwd~~~~~~~~~~~h~~~v~~~~ 556 (577)
T 2ymu_A 486 S-DD------KTVKLWNRNGQLLQTLTG-HSSSVRGVAFSPDGQTIASAS-DDKTVKLWNRNGQLLQTLTGHSSSVWGVA 556 (577)
T ss_dssp E-TT------SEEEEEETTSCEEEEEEC-CSSCEEEEEECTTSSCEEEEE-TTSEEEEECTTSCEEEEEECCSSCEEEEE
T ss_pred e-CC------CEEEEEcCCCCEEEEEeC-CCCCEEEEEEcCCCCEEEEEE-CcCEEEEEeCCCCEEEEEcCCCCCEEEEE
Confidence 3 22 457777788876555543 335678899998888776554 56789888988865555544 56667888
Q ss_pred EecCCccccccEEEEEECCCCEEEE
Q psy5806 1228 VRQSPGKAFIVELYWTDWEAMSVVI 1252 (1332)
Q Consensus 1228 v~~~~~~~~~~~lYwtd~~~~~V~~ 1252 (1332)
+ .+++.+|. |-...+.|..
T Consensus 557 f-----s~dg~~l~-s~~~D~~i~~ 575 (577)
T 2ymu_A 557 F-----SPDGQTIA-SASSDKTVKL 575 (577)
T ss_dssp E-----CTTSSCEE-EEETTSCEEE
T ss_pred E-----cCCCCEEE-EEeCCCEEEE
Confidence 8 22344443 4444555543
No 130
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=98.85 E-value=1.1e-09 Score=96.99 Aligned_cols=52 Identities=35% Similarity=0.735 Sum_probs=43.3
Q ss_pred CCCCCCCCCEEec-CCCEEEeeeecCCCCCCCCCCCccc---cc--ccCCCCCccccCC
Q psy5806 55 PPKKCSPDEHRCT-TGHCILKTWLCDGIPDCSLGEDERN---CN--KTCDAQKEFSCMK 107 (1332)
Q Consensus 55 ~~~~C~~~~f~C~-~g~Ci~~~~~CDg~~DC~DgsDE~~---C~--~~C~~~~~~~C~~ 107 (1332)
.+..|.+.+|+|. +|.|||..|+|||..||.|||||.. |+ .+|.+. +|+|.+
T Consensus 5 ~~~~C~~~~f~C~~~g~CIp~~~~CDg~~DC~DgsDE~~~~~C~~~~~C~~~-~f~c~~ 62 (80)
T 2kny_A 5 EGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLYNSTGSGS-GSGSTE 62 (80)
T ss_dssp SSCCCSSSEEECTTSSCEEEHHHHTTSSCCSSSSTTTSGGGTCSSSSTTTTC-SSCHHH
T ss_pred CCCCCCCCceecCCCCeEcChhhcCCCCCCCCCCCccccccCCCCCcccCcc-cchhhh
Confidence 4568999999998 6899999999999999999999985 55 346666 777765
No 131
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.85 E-value=1e-06 Score=103.53 Aligned_cols=223 Identities=12% Similarity=0.001 Sum_probs=138.4
Q ss_pred EEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeC---------CCCeEEEEECCCCCCceeEeec-----CCC
Q psy5806 1024 IRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADM---------RSGNLRTFDMSDSTRIKPIPLM-----NDT 1089 (1332)
Q Consensus 1024 i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~---------~~~~I~~~~l~~g~~~~~i~~~-----~~~ 1089 (1332)
|..++.+.. .++..++....| ++++++.+++||+++. ..+.|..+++..+.....+... ...
T Consensus 33 v~v~D~~t~---~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~ 108 (361)
T 2oiz_A 33 VHVYDYTNG---KFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLN 108 (361)
T ss_dssp EEEEETTTC---CEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCC
T ss_pred EEEEECCCC---eEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCC
Confidence 666765433 223334444567 9999999999999984 2456999997644433333221 134
Q ss_pred CceeeEEEecCCeEEEEcCC-CceEEEEeeCCc-eEEE-EecC---------CCCceEEEEcCCCcEEEEEecCCC----
Q psy5806 1090 IRDNFVIDWVANNIYYIDSQ-MHTINVARSDGQ-HKKI-LVND---------LMEPLAIAVYPRRGLLFYSHWGLY---- 1153 (1332)
Q Consensus 1090 ~p~glAvDw~~~~LY~td~~-~~~I~v~~ldG~-~~~~-~~~~---------~~~P~~iavdp~~g~Lywtd~~~~---- 1153 (1332)
.|.+|++++.++.||+++.. .+.|.+++++.. .... +..+ ...+.-+++.+....++|+.....
T Consensus 109 ~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~ 188 (361)
T 2oiz_A 109 YDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVAS 188 (361)
T ss_dssp CGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEE
T ss_pred CcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEee
Confidence 79999999999999999876 688999998743 2222 1110 012344666665555555532210
Q ss_pred --------C-CC------------------CCCcEEEEecCCCceEEEEecC--------C-CCcce---EEEecCCCEE
Q psy5806 1154 --------D-NS------------------PTTKIEKVYLDGSYRTVLVEED--------L-AFPNE---LAIDFKQRRL 1194 (1332)
Q Consensus 1154 --------~-~~------------------~~~~I~r~~ldG~~~~~l~~~~--------l-~~p~g---laiD~~~~~L 1194 (1332)
. .. ..++|+.+++.+....++-.-. . ..|.| +++++++++|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~l 268 (361)
T 2oiz_A 189 QSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRM 268 (361)
T ss_dssp EEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEE
T ss_pred eccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeE
Confidence 0 00 0122444444433222211100 0 12455 9999999999
Q ss_pred EEEEc----------CCCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1195 FWADS----------TNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1195 Y~~d~----------~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
|++.. ..+.|..+|+........+. .. |.+|++ ++++.+||.+++ +.|..+|..++
T Consensus 269 yv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~-----spdg~~l~v~n~--~~v~v~D~~t~ 335 (361)
T 2oiz_A 269 YVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTI-----DQQRNLMLTLDG--GNVNVYDISQP 335 (361)
T ss_dssp EEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEE-----ETTTTEEEEECS--SCEEEEECSSS
T ss_pred EEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEE-----CCCCCEEEEeCC--CeEEEEECCCC
Confidence 99865 24589999987554433344 45 999999 567789999996 99999998765
No 132
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=98.84 E-value=4.1e-10 Score=89.20 Aligned_cols=39 Identities=46% Similarity=1.226 Sum_probs=35.8
Q ss_pred CCCCCCCEEec-----CCCEEEeeeecCCCCCCCCCCCcccccc
Q psy5806 57 KKCSPDEHRCT-----TGHCILKTWLCDGIPDCSLGEDERNCNK 95 (1332)
Q Consensus 57 ~~C~~~~f~C~-----~g~Ci~~~~~CDg~~DC~DgsDE~~C~~ 95 (1332)
..|.+.+|+|. +++|||..|+|||..||.|||||.+|..
T Consensus 3 ~~C~~~~F~C~~~~~~~~~CIp~~~~CDG~~DC~DgSDE~~C~~ 46 (47)
T 1jrf_A 3 SRCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGCGT 46 (47)
T ss_dssp CCCCCCCSCSSSCSCCCTTTSGGGGSSSSSCCSSSSCTTHHHHC
T ss_pred CCCCCCeeECCCCCCCCCeEcCHhhcCCCCcCCCCCcccccCCC
Confidence 46889999998 7899999999999999999999999864
No 133
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.81 E-value=2.3e-07 Score=112.13 Aligned_cols=157 Identities=12% Similarity=0.093 Sum_probs=110.8
Q ss_pred CCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEee--c------CCCCceeeEEEec---CCeEEEEcCC-
Q psy5806 1042 PEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPL--M------NDTIRDNFVIDWV---ANNIYYIDSQ- 1109 (1332)
Q Consensus 1042 ~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~--~------~~~~p~glAvDw~---~~~LY~td~~- 1109 (1332)
.++.+|.+|++++.+ +||+++...++|++++..+|.. +.+.. . +.+.+.|||+++. ++.||+++..
T Consensus 24 ~~l~~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~-~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~ 101 (454)
T 1cru_A 24 SNLNKPHALLWGPDN-QIWLTERATGKILRVNPESGSV-KTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFK 101 (454)
T ss_dssp CCCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEE
T ss_pred CCCCCceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcE-eEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecc
Confidence 457789999999875 6999997777899998543432 22221 1 2345679999987 8999999853
Q ss_pred -----------CceEEEEeeCCc-----eEEEEec-----CCCCceEEEEcCCCcEEEEEecCCCC--------------
Q psy5806 1110 -----------MHTINVARSDGQ-----HKKILVN-----DLMEPLAIAVYPRRGLLFYSHWGLYD-------------- 1154 (1332)
Q Consensus 1110 -----------~~~I~v~~ldG~-----~~~~~~~-----~~~~P~~iavdp~~g~Lywtd~~~~~-------------- 1154 (1332)
..+|.++++++. ..+++.. ....+.+|+++| .|+||++......
T Consensus 102 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~~~~~~ 180 (454)
T 1cru_A 102 NPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQH 180 (454)
T ss_dssp CTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTC
T ss_pred ccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCcccccccccccc
Confidence 357777777531 2233322 234589999999 7899999532100
Q ss_pred ------------CCCCCcEEEEecCCCc----------eEEEEecCCCCcceEEEecCCCEEEEEEcCCC
Q psy5806 1155 ------------NSPTTKIEKVYLDGSY----------RTVLVEEDLAFPNELAIDFKQRRLFWADSTNK 1202 (1332)
Q Consensus 1155 ------------~~~~~~I~r~~ldG~~----------~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~ 1202 (1332)
....++|.|++.||+. ...++..++..|.||++|+ .++||.+|.+.+
T Consensus 181 ~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp-~G~L~~~d~g~~ 249 (454)
T 1cru_A 181 TPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTP-NGKLLQSEQGPN 249 (454)
T ss_dssp CCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECT-TSCEEEEEECSS
T ss_pred ccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECC-CCCEEEEecCCC
Confidence 1125789999999982 2345666889999999998 689999997643
No 134
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.81 E-value=2.7e-07 Score=108.48 Aligned_cols=201 Identities=16% Similarity=0.108 Sum_probs=133.4
Q ss_pred eEEEEEeCCCcEEE--EEe-------C-----CCCeEEEEECC-CCCCceeEee---cCCCCceeeEEEecCCeEEEEcC
Q psy5806 1047 SIFFDYHYSKNLIY--FAD-------M-----RSGNLRTFDMS-DSTRIKPIPL---MNDTIRDNFVIDWVANNIYYIDS 1108 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY--~sd-------~-----~~~~I~~~~l~-~g~~~~~i~~---~~~~~p~glAvDw~~~~LY~td~ 1108 (1332)
+..+++++.+++|| .++ . ..+.+..++++ +|.....+.. .....|.++++++.++.||+++.
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 164 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL 164 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC
Confidence 44567788877544 333 1 46677777765 2332222221 13457999999999999999998
Q ss_pred CCceEEEEeeC--CceEEE--Ee--cCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecC---CCceE---EEE-
Q psy5806 1109 QMHTINVARSD--GQHKKI--LV--NDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLD---GSYRT---VLV- 1175 (1332)
Q Consensus 1109 ~~~~I~v~~ld--G~~~~~--~~--~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ld---G~~~~---~l~- 1175 (1332)
..+.|.+++++ |+...+ +. .....|++++++|...+||+++... +.|...+++ |.... .+.
T Consensus 165 ~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~------~~v~v~~~~~~~g~~~~~~~~~~~ 238 (365)
T 1jof_A 165 TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG------NRICEYVIDPATHMPVYTHHSFPL 238 (365)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT------TEEEEEEECTTTCCEEEEEEEEES
T ss_pred CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC------CeEEEEEEeCCCCcEEEccceEEc
Confidence 88899999996 554322 32 1135799999999877999998654 456665554 43211 111
Q ss_pred -ecCC---C-------CcceEE-EecCCCEEEEEEcCCC-----eEEEEecC--CCceEE--EEe--ecccceEEEecCC
Q psy5806 1176 -EEDL---A-------FPNELA-IDFKQRRLFWADSTNK-----RIEYCDFF--GRSRKI--VIS--KVAPYGLSVRQSP 1232 (1332)
Q Consensus 1176 -~~~l---~-------~p~gla-iD~~~~~LY~~d~~~~-----~I~~~d~d--G~~~~~--~~~--~~~P~glav~~~~ 1232 (1332)
..+. . .|.+++ ++++++.||.++...+ +|..++++ |..+.+ .+. ...|.++++
T Consensus 239 ~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~---- 314 (365)
T 1jof_A 239 IPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAV---- 314 (365)
T ss_dssp SCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCE----
T ss_pred CCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCccccee----
Confidence 1111 1 488999 9999999999987665 88888874 443322 122 457889998
Q ss_pred ccc---cccEEEEEECCCCEEEEEEecCC
Q psy5806 1233 GKA---FIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1233 ~~~---~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
++ ++++||+++..+++|..++....
T Consensus 315 -sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 315 -SPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp -EECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred -cCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 44 47899999988888887776543
No 135
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.79 E-value=1.6e-06 Score=95.09 Aligned_cols=187 Identities=14% Similarity=0.079 Sum_probs=135.3
Q ss_pred eEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEEE
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKKI 1125 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~~ 1125 (1332)
..||.|+ +++||.+....+.|+++++.+|.-...+ .....-.+||+++ +++||.++...+.+.++|.+ ++....
T Consensus 57 tqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp EEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEE
Confidence 4789888 4799999999999999999877666555 3322234778887 89999999999999999987 444444
Q ss_pred EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEec-----CCCCcceEEEecCCCEEEEEEcC
Q psy5806 1126 LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEE-----DLAFPNELAIDFKQRRLFWADST 1200 (1332)
Q Consensus 1126 ~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~-----~l~~p~glaiD~~~~~LY~~d~~ 1200 (1332)
+... ..+.+|+-| .++||.++ +. .+|..++........-+.. .+..+|+|... +++||.....
T Consensus 132 i~~~-~eGwGLt~D--g~~L~vSd-Gs------~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~ 199 (268)
T 3nok_A 132 TRYS-GEGWGLCYW--NGKLVRSD-GG------TMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWH 199 (268)
T ss_dssp EECS-SCCCCEEEE--TTEEEEEC-SS------SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETT
T ss_pred EeCC-CceeEEecC--CCEEEEEC-CC------CEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECC
Confidence 5433 356677755 57999998 44 6899888766443332221 23456777665 6799998888
Q ss_pred CCeEEEEecCCCceEEEEe---e------------cccceEEEecCCccccccEEEEEECCCCEEEEEEe
Q psy5806 1201 NKRIEYCDFFGRSRKIVIS---K------------VAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIARE 1255 (1332)
Q Consensus 1201 ~~~I~~~d~dG~~~~~~~~---~------------~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~ 1255 (1332)
++.|.++|.........+. + .-|.|||+ ++.+++||+|.-.=..+|++..
T Consensus 200 s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~-----dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 200 SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAV-----EPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEE-----CTTTCCEEEEETTCSEEEEEEE
T ss_pred CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEE-----cCCCCEEEEeCCCCCceEEEEE
Confidence 9999999996444333333 1 36789999 5668899999977678887764
No 136
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.79 E-value=5.6e-07 Score=105.76 Aligned_cols=203 Identities=9% Similarity=-0.020 Sum_probs=137.6
Q ss_pred CccceEEEEEeCCCcEEEEEeCCCCeEEEEECC-CCCCceeEeecCCCCceeeEEEecCCe--EEEEc------C-----
Q psy5806 1043 EYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMS-DSTRIKPIPLMNDTIRDNFVIDWVANN--IYYID------S----- 1108 (1332)
Q Consensus 1043 ~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~-~g~~~~~i~~~~~~~p~glAvDw~~~~--LY~td------~----- 1108 (1332)
+..+|..+++++.++.||.++.. .|..++++ +|...........+.|.++++++.++. ||.++ .
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~--~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK--KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT--EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCCcEEEECCCCCEEEEEccc--eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceee
Confidence 44568899999999999999865 78877765 343222211112245889999988885 44454 1
Q ss_pred -CCceEEEEeeC--CceEEEEe----cCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecC-CCceEEE--Ee--
Q psy5806 1109 -QMHTINVARSD--GQHKKILV----NDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLD-GSYRTVL--VE-- 1176 (1332)
Q Consensus 1109 -~~~~I~v~~ld--G~~~~~~~----~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ld-G~~~~~l--~~-- 1176 (1332)
..+.+.+++++ |+....+. .....|.+++++|...+||.++.+. .+|...+++ ......+ +.
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~------~~v~~~~~~~~g~~~~~~~~~~~ 189 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTA------NKLWTHRKLASGEVELVGSVDAP 189 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT------TEEEEEEECTTSCEEEEEEEECS
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCC------CEEEEEEECCCCCEEEeeeEecC
Confidence 45678888885 55443322 2346899999999777899998765 678888886 3332222 22
Q ss_pred cCCCCcceEEEecCCCEEEEEEcCCCeEEEEecC---CCce---EEEEee-------c-------ccceEE-EecCCccc
Q psy5806 1177 EDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFF---GRSR---KIVISK-------V-------APYGLS-VRQSPGKA 1235 (1332)
Q Consensus 1177 ~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~d---G~~~---~~~~~~-------~-------~P~gla-v~~~~~~~ 1235 (1332)
..-..|.++++++++++||++....+.|..++++ |... ..+... . .|.+++ + ++
T Consensus 190 ~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~-----sp 264 (365)
T 1jof_A 190 DPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCAL-----TF 264 (365)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEE-----CT
T ss_pred CCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEE-----CC
Confidence 1135699999999999999999888888888776 3321 112111 1 488899 8 55
Q ss_pred cccEEEEEECCCC-----EEEEEEec-CC
Q psy5806 1236 FIVELYWTDWEAM-----SVVIAREK-SD 1258 (1332)
Q Consensus 1236 ~~~~lYwtd~~~~-----~V~~~~~~-~g 1258 (1332)
++.+||+++...+ +|..++.. +|
T Consensus 265 dG~~l~v~~~~~~~~~~~~i~v~~~~~~g 293 (365)
T 1jof_A 265 SGKYMFASSRANKFELQGYIAGFKLRDCG 293 (365)
T ss_dssp TSSEEEEEEEESSTTSCCEEEEEEECTTS
T ss_pred CCCEEEEECCCCCCCCCCeEEEEEECCCC
Confidence 6779999998665 88877764 44
No 137
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.79 E-value=3.5e-06 Score=100.33 Aligned_cols=286 Identities=12% Similarity=0.029 Sum_probs=157.2
Q ss_pred cCCCeEEEEeCCC----CeEEEEeCCCCceEEEEecCCCCCeEEEEeCCCCeEEEEecccCcC----CCCceEEEecC-C
Q psy5806 791 AIGRKIYWTDMNA----QTIMVSDIDGKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRTRL----TNNRIEMAHMD-G 861 (1332)
Q Consensus 791 ~~~~nLYwtD~~~----~~I~v~~ldG~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~----~~~~I~r~~~d-G 861 (1332)
+.++.+|+++... ++|.+.+++.....--+..+ ..| +|+++|...+||++++..++. ....|...+.. +
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG-~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG-FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC-CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 4567899999865 79999998654433333334 469 999999989999998631100 01245555433 2
Q ss_pred CCcEEEe-c-c-----cccCceeEEeCCCCCeEEEEeCC-CCeEEEEccCCCce-eEEeccCCcceEEEEeCCEEEEEeC
Q psy5806 862 TNRAVFE-T-E-----VIWPSCLAIDYSDNPKLYWVDTS-KHTIEYKTLATGRA-KRAYAVQSHPYTLTVLDYYVYWTDV 932 (1332)
Q Consensus 862 ~~~~~l~-~-~-----l~~P~gl~iD~~~~~~lYw~d~~-~~~I~~~~~dG~~~-~~l~~~~~~P~~la~~~~~iywtD~ 932 (1332)
+....|. . . ...|.+++++.++ ++||+++.. .+.|..+|...... ..+. +..-..+...+...|.+..
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDG-k~lyV~n~~~~~~VsVID~~t~kvv~~I~--v~g~~~~~p~g~~~~v~~~ 236 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDN-KNLLFYQFSPAPAVGVVDLEGKTFDRMLD--VPDCYHIFPASPTVFYMNC 236 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTS-SEEEEEECSSSCEEEEEETTTTEEEEEEE--CCSEEEEEEEETTEEEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCC-CEEEEEecCCCCeEEEEECCCCeEEEEEE--cCCceeeccCCCcEEEEEc
Confidence 2222221 1 0 2468899999999 999998864 56777777654322 1111 1110111112223333332
Q ss_pred CCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccccCc
Q psy5806 933 QHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTR 1012 (1332)
Q Consensus 933 ~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~ 1012 (1332)
.++++..++..++
T Consensus 237 ~dG~~~~V~~~~~------------------------------------------------------------------- 249 (426)
T 3c75_H 237 RDGSLARVDFADG------------------------------------------------------------------- 249 (426)
T ss_dssp TTSSEEEEECCTT-------------------------------------------------------------------
T ss_pred CCCCEEEEECCCC-------------------------------------------------------------------
Confidence 3332222111000
Q ss_pred ceEEEEeecceEEEEe-CCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEee------
Q psy5806 1013 EFLLYTSRFGVIRRIS-LDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPL------ 1085 (1332)
Q Consensus 1013 ~~ll~~~~~~~i~~i~-l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~------ 1085 (1332)
.+..... .-.... .|+ ...+.|.+..+++||+. ..+.++.+++. +....++..
T Consensus 250 ---------~v~~~~~~~~~v~~----~p~-----~~~~~~~~dg~~~~~~s-~~g~V~ViD~~-~~~~~v~~~~~~~~~ 309 (426)
T 3c75_H 250 ---------ETKVTNTEVFHTED----ELL-----INHPAFSLRSGRLVWPT-YTGKIFQADLT-AEGATFRAPIEALTE 309 (426)
T ss_dssp ---------CCEEEECCCCSCTT----SCB-----CSCCEECTTTCEEEEEB-TTSEEEEEEEC-SSCEEECCCEESSCT
T ss_pred ---------cEEEEeeeeeccCC----Cce-----eeEeeecCCCCEEEEEe-CCCcEEEEecc-CCceEEeeeeeeccc
Confidence 0000000 000000 010 01234566666666665 34667777754 221111100
Q ss_pred ---cCCCCcee---eEEEecCCeEEEEcCC---------CceEEEEeeCCc-eEEEEecCCCCceEEEEcCCCc-EEEEE
Q psy5806 1086 ---MNDTIRDN---FVIDWVANNIYYIDSQ---------MHTINVARSDGQ-HKKILVNDLMEPLAIAVYPRRG-LLFYS 1148 (1332)
Q Consensus 1086 ---~~~~~p~g---lAvDw~~~~LY~td~~---------~~~I~v~~ldG~-~~~~~~~~~~~P~~iavdp~~g-~Lywt 1148 (1332)
.....|.| ++++..+++||+++.+ .+.|.++|+... ....+..+ ..|.+|+++|... +||.+
T Consensus 310 ~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~ 388 (426)
T 3c75_H 310 AERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYAL 388 (426)
T ss_dssp TTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEE
T ss_pred cccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEE
Confidence 00113555 8999999999999742 357999999744 33334333 3699999999877 89999
Q ss_pred ecCCCCCCCCCcEEEEecCCCceEEEE
Q psy5806 1149 HWGLYDNSPTTKIEKVYLDGSYRTVLV 1175 (1332)
Q Consensus 1149 d~~~~~~~~~~~I~r~~ldG~~~~~l~ 1175 (1332)
+++. +.|..+++.......-+
T Consensus 389 n~~s------~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 389 SAGT------QTLHIYDAATGEELRSV 409 (426)
T ss_dssp ETTT------TEEEEEETTTCCEEEEE
T ss_pred cCCC------CeEEEEECCCCCEEEEe
Confidence 9866 78999998665544333
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.76 E-value=1.9e-06 Score=98.87 Aligned_cols=316 Identities=10% Similarity=0.016 Sum_probs=174.1
Q ss_pred EEEEecCCCceEEEecCCCCceEEEeCCC-C-CccceeEecCCCeEEEEeCCCCeEEEEeCCC-CceEEEEecCC----C
Q psy5806 753 IYWSDISEKTIERVRFDMTGRERLVVNDL-N-RTESIAVDAIGRKIYWTDMNAQTIMVSDIDG-KNAKVLFWLNL----Y 825 (1332)
Q Consensus 753 lYwsD~~~~~I~r~~~~g~~~~~vi~~~~-~-~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG-~~~~~l~~~~~----~ 825 (1332)
++++....+.|..+++........+..+- . .|.++++++.++.||+++...+.|.+.++.. +....+..... .
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 34444555556665554332222222221 1 4899999999999999999889999999854 43333322111 1
Q ss_pred CCeEEEEeCCCCeEEEEeccc----CcC--CCCceEEEecCCCCcEEEecccccCceeEEeCCCCCeEEEEeCCCCeEEE
Q psy5806 826 RPRSIVVHYGLGLMVWADWSR----TRL--TNNRIEMAHMDGTNRAVFETEVIWPSCLAIDYSDNPKLYWVDTSKHTIEY 899 (1332)
Q Consensus 826 ~P~~Iavdp~~g~lywtd~g~----~~~--~~~~I~r~~~dG~~~~~l~~~l~~P~gl~iD~~~~~~lYw~d~~~~~I~~ 899 (1332)
.|.+++++|...+||++..+. ... ....|...+++.............|.+++++.++ +.||+++ +.|..
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~---~~i~~ 158 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDG-SKLYGLG---RDLHV 158 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTS-SCEEEES---SSEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCC-CEEEEeC---CeEEE
Confidence 689999999877999985220 000 0146777777643322222224467889999888 8899883 56777
Q ss_pred EccCCCceeEEec--cCCcceEEEEeCCEEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCC
Q psy5806 900 KTLATGRAKRAYA--VQSHPYTLTVLDYYVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNG 977 (1332)
Q Consensus 900 ~~~dG~~~~~l~~--~~~~P~~la~~~~~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nG 977 (1332)
.++.+........ ....|..+...+.+||.+....+.+.. .+.......
T Consensus 159 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~-------------------~~~~~~~~~---------- 209 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMAT-------------------PFYTARKDI---------- 209 (337)
T ss_dssp EETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEE-------------------EEEEEBTTS----------
T ss_pred EECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceee-------------------eeecccccc----------
Confidence 7776543322222 112333333344445444333333211 111000000
Q ss_pred CCccccccCCCCccccCCCCeeEccCCccccccCcceEEEEeecceEEEEeCCCCCCCCcccccC-CccceEEEEEeCCC
Q psy5806 978 GCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLPFP-EYMSSIFFDYHYSK 1056 (1332)
Q Consensus 978 gCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~-~~~~~~~id~d~~~ 1056 (1332)
+ . ..|... ... |..+++...... ..++. ....+.+++|++.+
T Consensus 210 ~--------------------------~---~~~~~~-----~~~-v~~~d~~~~~~~--~~~~~~~~~~~~~~~~s~dg 252 (337)
T 1pby_B 210 D--------------------------P---ADPTAY-----RTG-LLTMDLETGEMA--MREVRIMDVFYFSTAVNPAK 252 (337)
T ss_dssp C--------------------------T---TSGGGE-----EEE-EEEEETTTCCEE--EEEEEECSSCEEEEEECTTS
T ss_pred c--------------------------c---cccccc-----ccc-eEEEeCCCCCce--EeecCCCCCceeeEEECCCC
Confidence 0 0 000000 012 333333322111 11111 12346789999999
Q ss_pred cEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEEEEecCCCCceE
Q psy5806 1057 NLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKKILVNDLMEPLA 1135 (1332)
Q Consensus 1057 ~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~~~~~~~~~P~~ 1135 (1332)
+.||.+ .+.|+.+++.++.....+ .....|.++++++.++.||++. ..+.|.++++. ++....+..+ ..|.
T Consensus 253 ~~l~~~---~~~v~~~d~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~-~~~~i~v~d~~~~~~~~~~~~~-~~~~- 324 (337)
T 1pby_B 253 TRAFGA---YNVLESFDLEKNASIKRV--PLPHSYYSVNVSTDGSTVWLGG-ALGDLAAYDAETLEKKGQVDLP-GNAS- 324 (337)
T ss_dssp SEEEEE---ESEEEEEETTTTEEEEEE--ECSSCCCEEEECTTSCEEEEES-BSSEEEEEETTTCCEEEEEECG-GGCC-
T ss_pred CEEEEe---CCeEEEEECCCCcCccee--cCCCceeeEEECCCCCEEEEEc-CCCcEEEEECcCCcEEEEEEcC-CCCc-
Confidence 999998 488999998744333322 2335789999999899999984 46789999987 4444434322 1233
Q ss_pred EEEcCCCcEEEEE
Q psy5806 1136 IAVYPRRGLLFYS 1148 (1332)
Q Consensus 1136 iavdp~~g~Lywt 1148 (1332)
+++ ....+|+.
T Consensus 325 ~~~--~~~~~~~~ 335 (337)
T 1pby_B 325 MSL--ASVRLFTR 335 (337)
T ss_dssp CBT--CCCEEEEC
T ss_pred eeE--eeeEEEec
Confidence 222 24467664
No 139
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.75 E-value=1.1e-05 Score=94.35 Aligned_cols=305 Identities=13% Similarity=0.077 Sum_probs=168.4
Q ss_pred eEecCCCeEEEEeCC----CCeEEEEeCCCCceEEEEecCCCCCeEEEEeCCCCeEEEEecccCcC----CCCceEEEec
Q psy5806 788 AVDAIGRKIYWTDMN----AQTIMVSDIDGKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRTRL----TNNRIEMAHM 859 (1332)
Q Consensus 788 AvD~~~~nLYwtD~~----~~~I~v~~ldG~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~----~~~~I~r~~~ 859 (1332)
+..+.++.+|++|.. .++|.|.+++.....--+..+ ..|. |+++|...+||++++...++ ....|...+.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG-~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC-CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 345678999999986 678999988644333233334 4585 99999988999998521100 0023555444
Q ss_pred CCCC-cEEEecc-------cccCceeEEeCCCCCeEEEEeCC-CCeEEEEccCCCce-eEEeccCCcceEEEEeCCEEEE
Q psy5806 860 DGTN-RAVFETE-------VIWPSCLAIDYSDNPKLYWVDTS-KHTIEYKTLATGRA-KRAYAVQSHPYTLTVLDYYVYW 929 (1332)
Q Consensus 860 dG~~-~~~l~~~-------l~~P~gl~iD~~~~~~lYw~d~~-~~~I~~~~~dG~~~-~~l~~~~~~P~~la~~~~~iyw 929 (1332)
.... ...|.-. ...|.+++++.++ ++||+++.. .+.|..+|...... .++ ++....++.-.+.+.|
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDG-k~lyVan~~~~~~VsVID~~t~~vv~tI--~v~g~~~~~P~g~~~~- 192 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDG-KTLLFYQFSPAPAVGVVDLEGKAFKRML--DVPDCYHIFPTAPDTF- 192 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTS-SEEEEEECSSSCEEEEEETTTTEEEEEE--ECCSEEEEEEEETTEE-
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCC-CEEEEEEcCCCCeEEEEECCCCcEEEEE--ECCCcceeecCCCcee-
Confidence 3221 1222110 2368999999999 999999864 67888888765432 222 1111111111111111
Q ss_pred EeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccc
Q psy5806 930 TDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFS 1009 (1332)
Q Consensus 930 tD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~ 1009 (1332)
...|++|-.+..+..
T Consensus 193 -------------------------------------------------------------~~~~~DG~~~~v~~~---- 207 (386)
T 3sjl_D 193 -------------------------------------------------------------FMHCRDGSLAKVAFG---- 207 (386)
T ss_dssp -------------------------------------------------------------EEEETTSCEEEEECC----
T ss_pred -------------------------------------------------------------EEECCCCCEEEEECC----
Confidence 112223322110000
Q ss_pred cCcceEEEEeecceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeec---
Q psy5806 1010 RTREFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLM--- 1086 (1332)
Q Consensus 1010 ~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~--- 1086 (1332)
+...+.. ++.. ..+ ... .|+ ..+ ..|+..++++||+.. .++++.+++.+ ...+++-..
T Consensus 208 -~~g~v~~-~~~~-----~~~-~~~----~~~--~~~---~~~~~~dG~~~~vs~-~g~V~v~d~~~-~~~~v~~~~~~~ 268 (386)
T 3sjl_D 208 -TEGTPEI-THTE-----VFH-PED----EFL--INH---PAYSQKAGRLVWPTY-TGKIHQIDLSS-GDAKFLPAVEAL 268 (386)
T ss_dssp -SSSCCEE-EECC-----CCS-CTT----SCB--CSC---CEEETTTTEEEEEBT-TSEEEEEECTT-SSCEECCCEESS
T ss_pred -CCCeEEE-eecc-----eec-ccc----ccc--ccc---ceeEcCCCcEEEEeC-CCEEEEEECCC-Ccceeecceecc
Confidence 0000000 0000 000 000 111 111 155666677777653 67888888762 222211110
Q ss_pred ------CCCCcee---eEEEecCCeEEEEcCC---------CceEEEEeeCCce-EEEEecCCCCceEEEEcCCCc-EEE
Q psy5806 1087 ------NDTIRDN---FVIDWVANNIYYIDSQ---------MHTINVARSDGQH-KKILVNDLMEPLAIAVYPRRG-LLF 1146 (1332)
Q Consensus 1087 ------~~~~p~g---lAvDw~~~~LY~td~~---------~~~I~v~~ldG~~-~~~~~~~~~~P~~iavdp~~g-~Ly 1146 (1332)
....|.| +|++..++.||++... .++|.++|+.... ...+..+ ..|.+|+|+|... +||
T Consensus 269 ~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly 347 (386)
T 3sjl_D 269 TEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLY 347 (386)
T ss_dssp CHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEE
T ss_pred ccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEE
Confidence 1113555 9999999999998531 3578888887443 3334333 4789999999765 789
Q ss_pred EEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecC
Q psy5806 1147 YSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFK 1190 (1332)
Q Consensus 1147 wtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~ 1190 (1332)
.++++. ..|..++........-+.. ..+|+.|.+..+
T Consensus 348 ~tn~~~------~~VsViD~~t~k~~~~i~~-~~~p~~l~~s~d 384 (386)
T 3sjl_D 348 ALSTGD------KTLYIHDAESGEELRSVNQ-LGHGPQVITTAD 384 (386)
T ss_dssp EEETTT------TEEEEEETTTCCEEEEECC-CCSSCCEEEECC
T ss_pred EEcCCC------CeEEEEECCCCcEEEEecC-CCCCceeEECCc
Confidence 989865 6798888865454444543 588999988754
No 140
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.75 E-value=1.7e-06 Score=94.91 Aligned_cols=189 Identities=14% Similarity=0.025 Sum_probs=132.5
Q ss_pred eEEEEEeCCCcEEEEEeCCCC--eEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceE
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSG--NLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHK 1123 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~--~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~ 1123 (1332)
..||.|+ +++||.+....+ .|+++++.+|.-...+......-.+||+++ +++||+++...+.+.++|.+ ++..
T Consensus 45 tqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 45 TEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEE
T ss_pred cceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEE
Confidence 4799998 469999986654 899999886654444432222234778887 89999999999999999987 4544
Q ss_pred EEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEec-----CCCCcceEEEecCCCEEEEEE
Q psy5806 1124 KILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEE-----DLAFPNELAIDFKQRRLFWAD 1198 (1332)
Q Consensus 1124 ~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~-----~l~~p~glaiD~~~~~LY~~d 1198 (1332)
..+..+ ..+.+++-| .+.||.++ +. .+|..++........-+.. .+..+|.|... +++||...
T Consensus 121 ~ti~~~-~eG~glt~d--g~~L~~Sd-Gs------~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~ 188 (262)
T 3nol_A 121 RSFNYD-GEGWGLTHN--DQYLIMSD-GT------PVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANV 188 (262)
T ss_dssp EEEECS-SCCCCEEEC--SSCEEECC-SS------SEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEE
T ss_pred EEEECC-CCceEEecC--CCEEEEEC-CC------CeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEE
Confidence 445433 355666654 67999998 33 6799888765443332221 23556667765 67999998
Q ss_pred cCCCeEEEEecCCCceEEEEe--------------ecccceEEEecCCccccccEEEEEECCCCEEEEEEec
Q psy5806 1199 STNKRIEYCDFFGRSRKIVIS--------------KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREK 1256 (1332)
Q Consensus 1199 ~~~~~I~~~d~dG~~~~~~~~--------------~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~ 1256 (1332)
..++.|.++|.........+. ..-|.|||+ ++.+++||+|.-.=..++++...
T Consensus 189 w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~-----dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 189 WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAW-----DKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEE-----ETTTTEEEEEETTCSEEEEEEEE
T ss_pred ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEE-----cCCCCEEEEECCCCCceEEEEEe
Confidence 889999999996444333332 135689999 66689999999777888887653
No 141
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.74 E-value=3.6e-06 Score=91.50 Aligned_cols=190 Identities=15% Similarity=0.023 Sum_probs=133.1
Q ss_pred ceEEEEEeCCCcEEEEEeCCC--CeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-Cce
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRS--GNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQH 1122 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~--~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~ 1122 (1332)
...||.|+. ++||.+.... +.|+++++.+|.-...+......-.+||+++ +++||..+...+.+.++|.+ ++.
T Consensus 22 ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 22 FTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp CEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEE
T ss_pred ccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcE
Confidence 357999986 7999998664 5899999886644444432222234677777 89999999999999999997 444
Q ss_pred EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEec-----CCCCcceEEEecCCCEEEEE
Q psy5806 1123 KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEE-----DLAFPNELAIDFKQRRLFWA 1197 (1332)
Q Consensus 1123 ~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~-----~l~~p~glaiD~~~~~LY~~ 1197 (1332)
...+..+ ..+.+|+-| .+.||.+| +. .+|..++........-+.. .+..+|.|... +++||..
T Consensus 98 ~~ti~~~-~~Gwglt~d--g~~L~vSd-gs------~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~lyan 165 (243)
T 3mbr_X 98 RARFRYP-GEGWALTSD--DSHLYMSD-GT------AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGELLAN 165 (243)
T ss_dssp EEEEECS-SCCCEEEEC--SSCEEEEC-SS------SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEE
T ss_pred EEEEeCC-CCceEEeeC--CCEEEEEC-CC------CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCEEEEE
Confidence 4445443 356777654 67999998 44 6799888765443333322 13455666654 7899988
Q ss_pred EcCCCeEEEEecCCCceEEEEe---------------ecccceEEEecCCccccccEEEEEECCCCEEEEEEec
Q psy5806 1198 DSTNKRIEYCDFFGRSRKIVIS---------------KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREK 1256 (1332)
Q Consensus 1198 d~~~~~I~~~d~dG~~~~~~~~---------------~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~ 1256 (1332)
...++.|.++|.........+. ..-|.|||+ ++.+++||+|.-.=..++++...
T Consensus 166 vw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~-----d~~~~~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 166 VWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAF-----DAEHDRLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp ETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEE-----ETTTTEEEEEETTCSEEEEEEEC
T ss_pred ECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEE-----cCCCCEEEEECCCCCcEEEEEEe
Confidence 8889999999996444333332 135689999 56689999999777888888764
No 142
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.73 E-value=2.8e-09 Score=109.93 Aligned_cols=60 Identities=20% Similarity=0.303 Sum_probs=46.9
Q ss_pred ccccccCCCCCceecC-CCCceEeCCcCcCCCCCCCCCCCCC--CCCCCCCCC-CCCCCCEE--ecCCCE
Q psy5806 8 LWVGYLQEIPQYKKCN-RTGACIPAQWQCDNEFDCEMGEDEM--KCPQASPPK-KCSPDEHR--CTTGHC 71 (1332)
Q Consensus 8 ~~~~~~~c~~~~f~C~-~~~~Ci~~~~~CDg~~DC~dgsDE~--~C~~~~~~~-~C~~~~f~--C~~g~C 71 (1332)
..+....|.+.||+|. ++|.|||..|+|||.+||.|||||. +| ... +|.+.+|+ |.++.|
T Consensus 46 ~~~~~~~C~~~eFqC~~~~g~CIp~~wvCDG~~DC~DGSDE~~~~C----~~~~tc~~~qF~g~~~~d~C 111 (220)
T 2gtl_N 46 TKIEGTHCEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVC----DTSVVKAGNVFSGTSTWHGC 111 (220)
T ss_dssp HHHHCCSSCTTEEECCSSSCCEEETTTTTSSSCCSTTCTTSCGGGG----CGGGGCTTCEEEEEEEECSS
T ss_pred hcCCCCCCCCCccCcCCCCCcEeCcceecCCCCCCCCCCccCcccC----CCCCccCCcceeeEecCChh
Confidence 3566778999999995 3689999999999999999999996 88 334 77766554 444433
No 143
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.73 E-value=1.6e-05 Score=93.60 Aligned_cols=297 Identities=8% Similarity=-0.023 Sum_probs=171.6
Q ss_pred CCCCCeEEEEeC-CCC---eEEEEccCCCceeEEeccCCcceEEEEe--CCEEEEEeCC---------CCEEEEEECCCC
Q psy5806 881 YSDNPKLYWVDT-SKH---TIEYKTLATGRAKRAYAVQSHPYTLTVL--DYYVYWTDVQ---------HSKIYRANKYDV 945 (1332)
Q Consensus 881 ~~~~~~lYw~d~-~~~---~I~~~~~dG~~~~~l~~~~~~P~~la~~--~~~iywtD~~---------~~~i~~~~~~~g 945 (1332)
... +++|.+|. ..+ .|..+|++.............| ++++. +.++|.++.. .+.|..++..+.
T Consensus 30 ~~~-~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 30 ADG-RRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CCC-CEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 344 68999987 555 7788887643322222233456 77765 6799999852 456666665544
Q ss_pred eEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEEee---cc
Q psy5806 946 KDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSR---FG 1022 (1332)
Q Consensus 946 ~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~---~~ 1022 (1332)
+++.. .+.. ....... + .-|.++.+..| ..+|++++. +.
T Consensus 108 ~~~~~-i~~~-----~~~~~~~---------------------g---~~p~~~~~spD--------G~~l~v~n~~~~~~ 149 (373)
T 2mad_H 108 LPIAD-IELP-----DAPRFDV---------------------G---PYSWMNANTPN--------NADLLFFQFAAGPA 149 (373)
T ss_pred cEEEE-EECC-----Ccccccc---------------------C---CCccceEECCC--------CCEEEEEecCCCCe
Confidence 32221 0000 0000000 0 12456666554 346666653 34
Q ss_pred eEEEEeCCCCCCCCcccc-cCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEee---cCCCCc--eeeEE
Q psy5806 1023 VIRRISLDTADLLPVTLP-FPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPL---MNDTIR--DNFVI 1096 (1332)
Q Consensus 1023 ~i~~i~l~~~~~~~~~~p-i~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~---~~~~~p--~glAv 1096 (1332)
|.-|+ +.. .++.. ++. +..+.+.+..++.|++....+++..+++ .+.....+.. .....| ...++
T Consensus 150 -v~viD-~t~---~~~~~~i~~---~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~ 220 (373)
T 2mad_H 150 -VGLVV-QGG---SSDDQLLSS---PTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQ 220 (373)
T ss_pred -EEEEE-CCC---CEEeEEcCC---CceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeeccee
Confidence 56565 433 22222 221 1223445666778888888889888887 4433322110 011122 23455
Q ss_pred EecCCeEEEEcCCCceEEEEeeCCceEEEEe-----c-----CCCCceE---EEEcCCCcEEEEEecCCCC---CCCCCc
Q psy5806 1097 DWVANNIYYIDSQMHTINVARSDGQHKKILV-----N-----DLMEPLA---IAVYPRRGLLFYSHWGLYD---NSPTTK 1160 (1332)
Q Consensus 1097 Dw~~~~LY~td~~~~~I~v~~ldG~~~~~~~-----~-----~~~~P~~---iavdp~~g~Lywtd~~~~~---~~~~~~ 1160 (1332)
+..++.+||... .+.+.++++.+...+++. . ....|.+ ++++|..++||++...... ......
T Consensus 221 ~~~~~~~~~~~~-~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~ 299 (373)
T 2mad_H 221 ANKSGRIVWPVY-SGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKE 299 (373)
T ss_pred EecCCEEEEEcC-CceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCe
Confidence 666777777663 457888888654322211 0 1113555 8999999999998642100 012357
Q ss_pred EEEEecCCCceEEEEecCCCCcceEEEecCCC-EEEEEEcCCCeEEEEecCCCceE-EEEe-ecccceEEE
Q psy5806 1161 IEKVYLDGSYRTVLVEEDLAFPNELAIDFKQR-RLFWADSTNKRIEYCDFFGRSRK-IVIS-KVAPYGLSV 1228 (1332)
Q Consensus 1161 I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~-~LY~~d~~~~~I~~~d~dG~~~~-~~~~-~~~P~glav 1228 (1332)
|..+++.......-+..+ ..|.+|+++++++ +||.+....+.|..+|....... .++. +..|.+|.+
T Consensus 300 V~VID~~t~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG~~P~~~~~ 369 (373)
T 2mad_H 300 VTSVTGLVGQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSV 369 (373)
T ss_pred EEEEECCCCEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCCCCCCcEEEE
Confidence 999999766654444433 4699999999999 88888877899999999755443 3355 889999987
No 144
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.72 E-value=0.0021 Score=87.96 Aligned_cols=572 Identities=9% Similarity=0.014 Sum_probs=291.7
Q ss_pred ccceEEEEEEccCCeEEEEcCCCceEEEEEecCcceEEEEeCCCCCCccEEEeccCCeEEEEeCCCCeEEEEeCCCCCcE
Q psy5806 466 VKSVVAIAWESANDSLYWADVENGEINRAHINGTFQYNVIRHNTKKPAGVAIDWRTNKLYWTESEYNWIEVSNLDGTYPT 545 (1332)
Q Consensus 466 ~~~~~~i~~d~~~~~lywsD~~~~~I~r~~~~g~~~~~v~~~~~~~p~glAvDw~~~~lYw~d~~~~~I~v~~l~g~~~~ 545 (1332)
...+.+++|.+....|... ..++.|.-.++........+......+..+++.+.++.|.. -+..+.|.+-++......
T Consensus 615 ~~~v~~~~~s~~~~~l~s~-~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s-~~~d~~v~vwd~~~~~~~ 692 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASC-GADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIAT-CSADKKVKIWDSATGKLV 692 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE-EETTSEEEEEETTTCCEE
T ss_pred cccEEEEEECCCCCEEEEE-eCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEE-EeCCCeEEEEECCCCceE
Confidence 3457789999866555544 46777877777644333334444556778999886665544 445678999998654333
Q ss_pred EEEeCCCCCceEEEEecCCC-eEEEEecCCCCceEEEcCCCCceEEEEeCCCCCceeeEEeccCCeEEEEeCCCCeEEEE
Q psy5806 546 LLFWQNLSEPRDIAVNPIGG-IMYWCSWGDLHKIEMAGMDGSHRHILASDSLKNPTGLAIDLENSRLYWANVGLKTIEFT 624 (1332)
Q Consensus 546 ~l~~~~~~~P~~iavdp~~G-~lywtd~g~~~~I~r~~~dG~~~~~l~~~~l~~p~glaiD~~~~rLYw~d~~~~~I~~~ 624 (1332)
..+.........+++.|... .++.+- +....|..-+++.......+...-...+.+++.+.++.|..+. ..+.|...
T Consensus 693 ~~~~~~~~~v~~~~~~~~~~~~~l~sg-~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s-~dg~v~vw 770 (1249)
T 3sfz_A 693 HTYDEHSEQVNCCHFTNKSNHLLLATG-SNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCS-ADGTLRLW 770 (1249)
T ss_dssp EEEECCSSCEEEEEECSSSSCCEEEEE-ETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEE-SSSEEEEE
T ss_pred EEEcCCCCcEEEEEEecCCCceEEEEE-eCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEE-CCCeEEEE
Confidence 33334455667888888533 233222 2233444444544443333333345567888887666555443 33556555
Q ss_pred ecCCCceEEEEeecceEEEeeecCceeEEEEeCCCCc--CcCCCcCCCCCCccccccCCCCCceeeCCCCccccCCCCcc
Q psy5806 625 NLDGTRKQTLIALHHLKVMTKVVGLTDIDIFHRRRSK--KTHPCNENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTC 702 (1332)
Q Consensus 625 ~~dG~~~~~~~~~~~l~v~~~~~~~~~i~v~~~~~q~--~~~pC~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC 702 (1332)
++.......... ..... ...+-..... ...| ..+.+|
T Consensus 771 d~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~------------~v~~-----~~~s~d---- 809 (1249)
T 3sfz_A 771 DVRSANERKSIN--------------------VKRFFLSSEDPPEDVEV------------IVKC-----CSWSAD---- 809 (1249)
T ss_dssp EGGGTEEEEEEE--------------------CCCCC--------CCCC------------CBCC-----CCBCTT----
T ss_pred eCCCCcccceec--------------------ccccccccCCccccccc------------eEEE-----EEECCC----
Confidence 554332111110 00000 0000000000 0000 111222
Q ss_pred ccCCccceEeeccceeEEEecCCCCCcceeeecccccceeEEeecCCCceEEEEecCCCceEEEecCCCCceEEEeCCCC
Q psy5806 703 SENPSKFLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMVASVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVVNDLN 782 (1332)
Q Consensus 703 ~~~~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~~~ 782 (1332)
..+++++....++..++...... ..+.......+.++++.+.+..++.+ ...+.|...+.+.......+.....
T Consensus 810 ----g~~l~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~v~~~~~sp~~~~l~~~-~~dg~v~vwd~~~~~~~~~~~~h~~ 883 (1249)
T 3sfz_A 810 ----GDKIIVAAKNKVLLFDIHTSGLL-AEIHTGHHSTIQYCDFSPYDHLAVIA-LSQYCVELWNIDSRLKVADCRGHLS 883 (1249)
T ss_dssp ----SSEEEEEETTEEEEEETTTCCEE-EEEECSSSSCCCEEEECSSTTEEEEE-CSSSCEEEEETTTTEEEEEECCCSS
T ss_pred ----CCEEEEEcCCcEEEEEecCCCce-eEEcCCCCCceEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCceeeecCCCcc
Confidence 33455555666766666543211 11111234457788888876555544 4567787777765443333444456
Q ss_pred CccceeEecCCCeEEEEeCCCCeEEEEeCCCCc------------------------------eEEE-------EecCCC
Q psy5806 783 RTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKN------------------------------AKVL-------FWLNLY 825 (1332)
Q Consensus 783 ~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~------------------------------~~~l-------~~~~~~ 825 (1332)
.+.++++.+.++.|+ +-+..+.|.+.++.+.. .... ......
T Consensus 884 ~v~~v~~spdg~~l~-s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 962 (1249)
T 3sfz_A 884 WVHGVMFSPDGSSFL-TASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEA 962 (1249)
T ss_dssp CEEEEEECTTSSEEE-EEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCS
T ss_pred ceEEEEECCCCCEEE-EEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccC
Confidence 678888887776555 44445567776643100 0000 000112
Q ss_pred CCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEecc-cccCceeEEeCCCCCeEEEEeCCCCeEEEEccCC
Q psy5806 826 RPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFETE-VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLAT 904 (1332)
Q Consensus 826 ~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~~-l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG 904 (1332)
....+++.|...+++..... +.|....+........... -....++++...+ +.|..+ ...+.|...++..
T Consensus 963 ~i~~~~~sp~g~~l~~g~~~------g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg-~~l~s~-~~dg~i~vwd~~~ 1034 (1249)
T 3sfz_A 963 QVSCCCLSPHLEYVAFGDED------GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADG-KTLISS-SEDSVIQVWNWQT 1034 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETT------SCCEEEETTTTSCEEECCCCSSCCCCEEECSSS-SCEEEE-CSSSBEEEEETTT
T ss_pred cEEEEEEcCCCCEEEEEcCC------CCEEEEEcCCCceeeecccCCCceEEEEECCCC-CEEEEE-cCCCEEEEEECCC
Confidence 35677788775555554422 3566655553332222222 4456678888877 555444 3456777777765
Q ss_pred CceeEEeccCCcceEEEEeCCEEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccc
Q psy5806 905 GRAKRAYAVQSHPYTLTVLDYYVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCL 984 (1332)
Q Consensus 905 ~~~~~l~~~~~~P~~la~~~~~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl 984 (1332)
.....+.........+++..+..+.+-...+.|...+..+++.+. .+... .+....+++
T Consensus 1035 ~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~---------~~~~~------------~~~v~~~~~ 1093 (1249)
T 3sfz_A 1035 GDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIER---------DFTCH------------QGTVLSCAI 1093 (1249)
T ss_dssp TEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCE---------EEECC------------SSCCCCEEE
T ss_pred CceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeE---------EEccc------------CCcEEEEEE
Confidence 443322222223345555543333333344555544444331111 11000 000000111
Q ss_pred cCCCCccccCCCCeeEccCCccccccCcceEEEEeecceEEEEeCCCCCCCCcccccCC-ccceEEEEEeCCCcEEEEEe
Q psy5806 985 RNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLPFPE-YMSSIFFDYHYSKNLIYFAD 1063 (1332)
Q Consensus 985 ~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~-~~~~~~id~d~~~~~lY~sd 1063 (1332)
.|.| .+|+....+..|+..++..... ...+.+ ...+.+++|++.++.|..++
T Consensus 1094 ---------s~d~---------------~~l~s~s~d~~v~iwd~~~~~~---~~~l~~h~~~v~~~~~s~dg~~lat~~ 1146 (1249)
T 3sfz_A 1094 ---------SSDA---------------TKFSSTSADKTAKIWSFDLLSP---LHELKGHNGCVRCSAFSLDGILLATGD 1146 (1249)
T ss_dssp ---------CSSS---------------SSCEEECCSSCCCEECSSSSSC---SBCCCCCSSCEEEEEECSSSSEEEEEE
T ss_pred ---------CCCC---------------CEEEEEcCCCcEEEEECCCcce---eeeeccCCCcEEEEEECCCCCEEEEEe
Confidence 1111 1222222222144444432221 111222 23467899999888777765
Q ss_pred CCCCeEEEEECCCCCCceeE--------eecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEEEEecCCCCce
Q psy5806 1064 MRSGNLRTFDMSDSTRIKPI--------PLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKKILVNDLMEPL 1134 (1332)
Q Consensus 1064 ~~~~~I~~~~l~~g~~~~~i--------~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~~~~~~~~~P~ 1134 (1332)
..+.|+..++.++.....+ .....+.+.++++.+.++.|..++ +.|.++++. |+....+......+.
T Consensus 1147 -~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~---g~v~vwd~~~g~~~~~~~~~~~~i~ 1222 (1249)
T 3sfz_A 1147 -DNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG---GYLKWWNVATGDSSQTFYTNGTNLK 1222 (1249)
T ss_dssp -TTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES---SSEEEBCSSSCBCCCCCCCSSCCCC
T ss_pred -CCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC---CeEEEEECCCCceeeeeeccCCccc
Confidence 6778888888765544332 112234578899998888887775 689999986 444333433445678
Q ss_pred EEEEcCCCcEEEEEe
Q psy5806 1135 AIAVYPRRGLLFYSH 1149 (1332)
Q Consensus 1135 ~iavdp~~g~Lywtd 1149 (1332)
+++++|...+|+.++
T Consensus 1223 ~~~~s~dg~~l~~~~ 1237 (1249)
T 3sfz_A 1223 KIHVSPDFRTYVTVD 1237 (1249)
T ss_dssp CCEECSSSCCEEEEC
T ss_pred EEEECCCCCEEEEec
Confidence 899999666666554
No 145
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.71 E-value=4.8e-07 Score=105.92 Aligned_cols=293 Identities=10% Similarity=0.013 Sum_probs=171.4
Q ss_pred ceEEEEecCCC----ceEEEecCCCCceEEEeCCCCCccceeEecCCCeEEEEeC---------CCCeEEEEeCCC-Cce
Q psy5806 751 EYIYWSDISEK----TIERVRFDMTGRERLVVNDLNRTESIAVDAIGRKIYWTDM---------NAQTIMVSDIDG-KNA 816 (1332)
Q Consensus 751 ~~lYwsD~~~~----~I~r~~~~g~~~~~vi~~~~~~p~glAvD~~~~nLYwtD~---------~~~~I~v~~ldG-~~~ 816 (1332)
.++|+++...+ .|..++.+......-+..+. .| |+++++.++.||+++. ..+.|.+.++.. +..
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~-~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv 109 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAF-LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI 109 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECT-TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEEeCCC-CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence 57888888766 66676665443333344443 48 9999999999999984 357899999854 333
Q ss_pred EEEEec------CCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEecccccCceeEEeCCCCCeEEEE
Q psy5806 817 KVLFWL------NLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFETEVIWPSCLAIDYSDNPKLYWV 890 (1332)
Q Consensus 817 ~~l~~~------~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~~l~~P~gl~iD~~~~~~lYw~ 890 (1332)
..+... ....|++|+++|..++||+++++.. ..+....+|-.....+ .-|.+..+...+ +++|.+
T Consensus 110 ~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~----~~v~V~~iD~~tv~~i----~v~~~~~~~p~g-~~~~~~ 180 (368)
T 1mda_H 110 ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSS----AAAGLSVPGASDDQLT----KSASCFHIHPGA-AATHYL 180 (368)
T ss_dssp EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSS----CEEEEEETTTEEEEEE----ECSSCCCCEEEE-TTEEEC
T ss_pred EEEECCCccccccCCCcceEEEcCCCCEEEEEccCCC----CeEEEEEEchhhceEE----ECCCceEEccCC-CeEEEE
Confidence 444222 1257999999999889999987633 3455522332211222 112223334455 678888
Q ss_pred eCCCCeEEEEccCC----CceeE-----EeccCCcceEEEEeCCEEEEEeCCCCEEEEEECCCC-eEEEeeeecCcceEE
Q psy5806 891 DTSKHTIEYKTLAT----GRAKR-----AYAVQSHPYTLTVLDYYVYWTDVQHSKIYRANKYDV-KDIVEFAQVDRPWLV 960 (1332)
Q Consensus 891 d~~~~~I~~~~~dG----~~~~~-----l~~~~~~P~~la~~~~~iywtD~~~~~i~~~~~~~g-~~i~~~~~~~i~~~~ 960 (1332)
....+++..++++. .+... +......|.. .-.++.+||+.. +.+..++...+ ..+
T Consensus 181 ~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~-~~~~~~~~~vs~--~~V~viD~~~~~~~v------------ 245 (368)
T 1mda_H 181 GSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQ-ANYPGMLVWAVA--SSILQGDIPAAGATM------------ 245 (368)
T ss_dssp CCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEE-ETTTTEEEECBS--SCCEEEECCSSCCEE------------
T ss_pred EcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccc-cccCCEEEEEcC--CEEEEEECCCCcceE------------
Confidence 77777877788765 11111 0111234542 223567777765 55554442211 000
Q ss_pred eccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEEeecceEEEEeCCCCCCCCcccc
Q psy5806 961 RAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLP 1040 (1332)
Q Consensus 961 ~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~p 1040 (1332)
+..+.+.... ..
T Consensus 246 ---------------------------------------------------------------~~~~~~~~~~-----~~ 257 (368)
T 1mda_H 246 ---------------------------------------------------------------KAAIDGNESG-----RK 257 (368)
T ss_dssp ---------------------------------------------------------------ECCCCSSCTH-----HH
T ss_pred ---------------------------------------------------------------EEEEEecccc-----cc
Confidence 0001110000 00
Q ss_pred cCCccceEE---EEEeCCCcEEEEEeC-C-------CCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcC-
Q psy5806 1041 FPEYMSSIF---FDYHYSKNLIYFADM-R-------SGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDS- 1108 (1332)
Q Consensus 1041 i~~~~~~~~---id~d~~~~~lY~sd~-~-------~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~- 1108 (1332)
.....|.+ +++++.++++|++.. . .+.+..+++........+- ....|.||++++.++.||++..
T Consensus 258 -~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~--vg~~p~gi~~s~Dg~~l~va~~~ 334 (368)
T 1mda_H 258 -ADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS--NGHDSDAIIAAQDGASDNYANSA 334 (368)
T ss_dssp -HTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE--EEEEECEEEECCSSSCEEEEEET
T ss_pred -ccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEE--CCCCcceEEECCCCCEEEEEccC
Confidence 00001111 467888889998764 2 2345588876433222222 1226999999998999999988
Q ss_pred CCceEEEEeeCC-ceEEEEecCCCCceEEEEcCC
Q psy5806 1109 QMHTINVARSDG-QHKKILVNDLMEPLAIAVYPR 1141 (1332)
Q Consensus 1109 ~~~~I~v~~ldG-~~~~~~~~~~~~P~~iavdp~ 1141 (1332)
..+.|.++|+.. +....+..+ ..|.+|+++++
T Consensus 335 ~~~~VsVID~~t~kvv~~I~vg-~~P~~i~~~~~ 367 (368)
T 1mda_H 335 GTEVLDIYDAASDQDQSSVELD-KGPESLSVQNE 367 (368)
T ss_dssp TTTEEEEEESSSCEEEEECCCC-SCCCEEECCCC
T ss_pred CCCeEEEEECCCCcEEEEEECC-CCCCEEEeecC
Confidence 689999999974 444445434 78999999874
No 146
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.68 E-value=5.8e-09 Score=109.03 Aligned_cols=69 Identities=19% Similarity=0.258 Sum_probs=53.1
Q ss_pred cccccCCCCCceecCC-CCceEeCCcCcCCCCCCCCCCCCC--CCCCCCCCC-CCCCCCEEecCCCEEEeeeecCCCCCC
Q psy5806 9 WVGYLQEIPQYKKCNR-TGACIPAQWQCDNEFDCEMGEDEM--KCPQASPPK-KCSPDEHRCTTGHCILKTWLCDGIPDC 84 (1332)
Q Consensus 9 ~~~~~~c~~~~f~C~~-~~~Ci~~~~~CDg~~DC~dgsDE~--~C~~~~~~~-~C~~~~f~C~~g~Ci~~~~~CDg~~DC 84 (1332)
.++...|.+.+|+|.+ +|.|||..|+|||+.||.|||||. +|. .. .|...+|.+. ....+|
T Consensus 48 ~~~~~~C~~~~F~C~~~~g~CI~~~~~CDG~~DC~DgSDE~~~~C~----~~~~~~~~~~~g~-----------~~~~~C 112 (217)
T 2gtl_M 48 NLEEHHCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPETCS----LNITHVGSSYTGL-----------ATWTSC 112 (217)
T ss_dssp TTSCCCCCTTEEECSSSSCCEEEGGGTTSSSCCSSSSTTTSHHHHC----CGGGCTTCEEEEE-----------EEESSS
T ss_pred cCCCCCCCCCceecCCCCCcEechhhccCCCCCCCCCCccccCcCC----CCcccCCcccccc-----------cCcccC
Confidence 5667789999999973 699999999999999999999998 783 22 3444455541 223589
Q ss_pred CCCCCccc
Q psy5806 85 SLGEDERN 92 (1332)
Q Consensus 85 ~DgsDE~~ 92 (1332)
.+++||..
T Consensus 113 ~~~~pe~~ 120 (217)
T 2gtl_M 113 EDLNPDHA 120 (217)
T ss_dssp CSCCSEEE
T ss_pred CCCCCCee
Confidence 99998865
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.67 E-value=1.5e-06 Score=100.44 Aligned_cols=221 Identities=10% Similarity=0.027 Sum_probs=142.3
Q ss_pred EEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecC-----CCCceeeEEEe
Q psy5806 1024 IRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMN-----DTIRDNFVIDW 1098 (1332)
Q Consensus 1024 i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~-----~~~p~glAvDw 1098 (1332)
|..+++...... ...+.+....+.++++++.++.+|+++...+.|+.+++.++.....+.... ...|.++++++
T Consensus 23 v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~sp 101 (349)
T 1jmx_B 23 LHVVDVASDTVY-KSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISP 101 (349)
T ss_dssp EEEEETTTTEEE-EEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECT
T ss_pred EEEEECCCCcEE-EEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECC
Confidence 777776543211 112222222578899999999999999888999999987443332332111 22489999999
Q ss_pred cCCeEEEEcCC-----------CceEEEEeeCC-ceEEE--EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEE
Q psy5806 1099 VANNIYYIDSQ-----------MHTINVARSDG-QHKKI--LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKV 1164 (1332)
Q Consensus 1099 ~~~~LY~td~~-----------~~~I~v~~ldG-~~~~~--~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~ 1164 (1332)
.++.||++... .+.|.++++.. +.... .......+.+++++|.. .||++. . .|...
T Consensus 102 dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~l~~~~--~-------~i~~~ 171 (349)
T 1jmx_B 102 DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG-SLYVAG--P-------DIYKM 171 (349)
T ss_dssp TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS-CEEEES--S-------SEEEE
T ss_pred CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC-cEEEcc--C-------cEEEE
Confidence 99999999854 46899999874 22211 22233468889999954 477752 1 25555
Q ss_pred ecCCCceEEEEecC------------------------------------------------------------------
Q psy5806 1165 YLDGSYRTVLVEED------------------------------------------------------------------ 1178 (1332)
Q Consensus 1165 ~ldG~~~~~l~~~~------------------------------------------------------------------ 1178 (1332)
++........+...
T Consensus 172 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (349)
T 1jmx_B 172 DVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA 251 (349)
T ss_dssp CTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEE
T ss_pred eCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccc
Confidence 55333222221111
Q ss_pred --CCCcceEEEec-CCCEEEEEEcCCCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEE
Q psy5806 1179 --LAFPNELAIDF-KQRRLFWADSTNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAR 1254 (1332)
Q Consensus 1179 --l~~p~glaiD~-~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~ 1254 (1332)
-..|.++++++ +++.||.+ .++|..+|+........+. ...|.++++ ++.+++||.+ ...+.|..++
T Consensus 252 ~~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~~~~~~~~~~~~~~~~~-----s~dg~~l~~~-~~~~~v~v~d 322 (349)
T 1jmx_B 252 DLTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRKLIKAANLDHTYYCVAF-----DKKGDKLYLG-GTFNDLAVFN 322 (349)
T ss_dssp ECSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTEEEEEEECSSCCCEEEE-----CSSSSCEEEE-SBSSEEEEEE
T ss_pred cCCCcceeeEecCCCCCEEEEE---cCeEEEEECccCeEEEEEcCCCCccceEE-----CCCCCEEEEe-cCCCeEEEEe
Confidence 01456677778 88899988 5789999997654433444 667899999 4456788886 4569999999
Q ss_pred ecCCCCcceEEEE
Q psy5806 1255 EKSDTGQWDVHLI 1267 (1332)
Q Consensus 1255 ~~~g~~~~~~~~~ 1267 (1332)
..++ +.+..+
T Consensus 323 ~~~~---~~~~~~ 332 (349)
T 1jmx_B 323 PDTL---EKVKNI 332 (349)
T ss_dssp TTTT---EEEEEE
T ss_pred cccc---ceeeee
Confidence 8877 544444
No 148
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.66 E-value=0.00028 Score=94.80 Aligned_cols=203 Identities=13% Similarity=0.031 Sum_probs=128.7
Q ss_pred cceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCC---------CceEEE
Q psy5806 1045 MSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQ---------MHTINV 1115 (1332)
Q Consensus 1045 ~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~---------~~~I~v 1115 (1332)
..+..++|++.+++|+++. ..+.|+.+++.+|. ...+.....+...++++.+.++.|.++... ...|.+
T Consensus 379 ~~~~~~~~SpDG~~la~~~-~~~~v~~~d~~tg~-~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l 456 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVAN-DRFEIMTVDLETGK-PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHV 456 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEE-TTSEEEEEETTTCC-EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEE
T ss_pred cceeeeEECCCCCEEEEEC-CCCeEEEEECCCCc-eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEE
Confidence 4567899999999998876 56789999987443 333332334456889999989989887542 358999
Q ss_pred EeeCCceEEEEecCCCCceEEEEcCCCcEEEEEecCCCC-----------CCCCCcEEEEe-------------------
Q psy5806 1116 ARSDGQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYD-----------NSPTTKIEKVY------------------- 1165 (1332)
Q Consensus 1116 ~~ldG~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~-----------~~~~~~I~r~~------------------- 1165 (1332)
+++++.....+......+..++++|...+|||+...... .....+++.+.
T Consensus 457 ~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (1045)
T 1k32_A 457 YDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSE 536 (1045)
T ss_dssp EETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCC
T ss_pred EECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccc
Confidence 999866544455555668889999988889988642200 00011233322
Q ss_pred -----cCCCc-eEEEEecCCCCcceEEEecCCCEEEE------------EEcCCCeEEEEecCCCceEEEEeecccceEE
Q psy5806 1166 -----LDGSY-RTVLVEEDLAFPNELAIDFKQRRLFW------------ADSTNKRIEYCDFFGRSRKIVISKVAPYGLS 1227 (1332)
Q Consensus 1166 -----ldG~~-~~~l~~~~l~~p~glaiD~~~~~LY~------------~d~~~~~I~~~d~dG~~~~~~~~~~~P~gla 1227 (1332)
++|.. +...+...-....++++.++++.+|. +.....+|+.+|+.+...+.+. ..+.+++
T Consensus 537 ~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~--~~v~~~~ 614 (1045)
T 1k32_A 537 AGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK--NNLTDLR 614 (1045)
T ss_dssp CCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE--EEEEEEE
T ss_pred cccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEee--cCcceEE
Confidence 22211 11111111133457888876644443 2334568999999776655554 3455667
Q ss_pred EecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1228 VRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1228 v~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
+ ++++.+|+++... .|..++..++
T Consensus 615 ~-----S~DG~~l~~~~~~--~i~~~d~~~~ 638 (1045)
T 1k32_A 615 L-----SADRKTVMVRKDD--GKIYTFPLEK 638 (1045)
T ss_dssp E-----CTTSCEEEEEETT--SCEEEEESSC
T ss_pred E-----CCCCCEEEEEcCC--cEEEEeCccC
Confidence 7 5578889998754 7888888777
No 149
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.65 E-value=1.6e-06 Score=105.59 Aligned_cols=185 Identities=12% Similarity=0.035 Sum_probs=129.8
Q ss_pred CCCcccccCCccceEEEEEeCCCcEEEEEeCCC-------------------------------------CeEEEEECCC
Q psy5806 1034 LLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRS-------------------------------------GNLRTFDMSD 1076 (1332)
Q Consensus 1034 ~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~-------------------------------------~~I~~~~l~~ 1076 (1332)
...+...|+--.+|.++++++.++++|+++.++ +.+..++...
T Consensus 184 t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~ 263 (595)
T 1fwx_A 184 KWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRK 263 (595)
T ss_dssp TTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSG
T ss_pred CCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcc
Confidence 344555544324788999999999999999665 2356666542
Q ss_pred CCCce--eEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCce------------EEE-EecCCCCceEEEEcCC
Q psy5806 1077 STRIK--PIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQH------------KKI-LVNDLMEPLAIAVYPR 1141 (1332)
Q Consensus 1077 g~~~~--~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~------------~~~-~~~~~~~P~~iavdp~ 1141 (1332)
..... ..+ .-...|+|+++++.++.+|+++...++|.+++++... ... +..+ ..|++++++|
T Consensus 264 ~~~~~~~~~I-pvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-~gP~h~aF~~- 340 (595)
T 1fwx_A 264 EASSLFTRYI-PIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-LGPLHTAFDG- 340 (595)
T ss_dssp GGCCSSEEEE-EEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-SCEEEEEECT-
T ss_pred cCCceeEEEE-ecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-CCcceEEECC-
Confidence 00111 111 1224899999999999999999999999999998331 111 3334 5799999999
Q ss_pred CcEEEEEecCCCCCCCCCcEEEEecCCC--------ceEEE--EecCCCCc------ceEEEecCCCEEEEEEcCC-CeE
Q psy5806 1142 RGLLFYSHWGLYDNSPTTKIEKVYLDGS--------YRTVL--VEEDLAFP------NELAIDFKQRRLFWADSTN-KRI 1204 (1332)
Q Consensus 1142 ~g~Lywtd~~~~~~~~~~~I~r~~ldG~--------~~~~l--~~~~l~~p------~glaiD~~~~~LY~~d~~~-~~I 1204 (1332)
+|++|.+.+-. +.|.+.+++.. ...++ +... .+| .|++++++++.||.++..+ +++
T Consensus 341 dG~aY~t~~ld------sqV~kwdi~~a~~~~~g~~~~~vi~kidV~-yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 341 RGNAYTSLFLD------SQVVKWNIEDAIRAYAGEKVDPIKDKLDVH-YQPGHLKTVMGETLDATNDWLVCLSKFSKDRF 413 (595)
T ss_dssp TSEEEEEETTT------TEEEEEEHHHHHHHHHTCSCCCEEEEEECS-SCEEEEEETTTTSTTCCSSEEEEEESCCTTSS
T ss_pred CCeEEEEEecC------CcEEEEEhhHhhhhhcccccceeEEEeecc-cccccceeccceEeCCCCCEEEEcCCCCcccc
Confidence 55999999876 77888888761 12233 2222 244 6788899999999999987 788
Q ss_pred -----------EEEecCCCceEEEEe---ecccceEEE
Q psy5806 1205 -----------EYCDFFGRSRKIVIS---KVAPYGLSV 1228 (1332)
Q Consensus 1205 -----------~~~d~dG~~~~~~~~---~~~P~glav 1228 (1332)
.-+|..|...+.+.. ...|...++
T Consensus 414 ~~~gp~~~~~~ql~dis~~~m~lv~d~p~~~ePh~~~i 451 (595)
T 1fwx_A 414 LNVGPLKPENDQLIDISGDKMVLVHDGPTFAEPHDAIA 451 (595)
T ss_dssp CCCCSSCCEEEEEEECSSSSCEEEEEEEESSCCCCEEE
T ss_pred ccCCCCCCCcceEEEcCCCcEEEEEEEcCCCCCCceEE
Confidence 888998877666654 667766655
No 150
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.64 E-value=9.2e-06 Score=95.33 Aligned_cols=89 Identities=17% Similarity=0.226 Sum_probs=65.2
Q ss_pred EEEeCCCcEEEEEeC----------CCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC
Q psy5806 1050 FDYHYSKNLIYFADM----------RSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD 1119 (1332)
Q Consensus 1050 id~d~~~~~lY~sd~----------~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld 1119 (1332)
+++++.++++|++.. ..++|..+++.++.....+- .+ . |.+||+++.++.||+++. +.|.++++.
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~-~~-~-p~~ia~spdg~~l~v~n~--~~v~v~D~~ 333 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIP-GR-D-ALSMTIDQQRNLMLTLDG--GNVNVYDIS 333 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEE-CT-T-CCEEEEETTTTEEEEECS--SCEEEEECS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEe-cC-C-eeEEEECCCCCEEEEeCC--CeEEEEECC
Confidence 678999999999864 13589999987543333332 22 3 999999999999999985 899999987
Q ss_pred -C--ceEEEEecCCCCceEEEEcCCCc
Q psy5806 1120 -G--QHKKILVNDLMEPLAIAVYPRRG 1143 (1332)
Q Consensus 1120 -G--~~~~~~~~~~~~P~~iavdp~~g 1143 (1332)
| +....+..--..|++|+++|..+
T Consensus 334 t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 334 QPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCcceeeEEeccCCCCcEEEEecCCCC
Confidence 4 33333433337899999999543
No 151
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.64 E-value=1.7e-06 Score=97.82 Aligned_cols=190 Identities=13% Similarity=0.045 Sum_probs=135.0
Q ss_pred ceeEEeecCCCceEEEEecCCCceEEEecCCCCceEEEeCCCC-------CccceeE---ecCCCeEEE-EeC-------
Q psy5806 740 MVASVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVVNDLN-------RTESIAV---DAIGRKIYW-TDM------- 801 (1332)
Q Consensus 740 ~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~~~-------~p~glAv---D~~~~nLYw-tD~------- 801 (1332)
-|.+++||...+++|+++...+.|.++++++...+++...++. .+.||.+ |.. +.|++ ++.
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTCTT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEccccccccc
Confidence 3667899999999999999999999999986555555333332 5789999 677 55776 562
Q ss_pred -----CCCeEEEEeCC----CCceEEEEec------------CCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecC
Q psy5806 802 -----NAQTIMVSDID----GKNAKVLFWL------------NLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMD 860 (1332)
Q Consensus 802 -----~~~~I~v~~ld----G~~~~~l~~~------------~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~d 860 (1332)
+...+.+.+++ |+....+-.. ....|.+||+|+. |..|+++...- +.|.|.+.|
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~-GnaYVt~s~~~----~~I~rV~pd 167 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD-GNSYVAFALGM----PAIARVSAD 167 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT-SCEEEEEEESS----CEEEEECTT
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCC-CCEEEeCCCCC----CeEEEEeCC
Confidence 35678889988 5444333211 1124889999986 99999986552 479999999
Q ss_pred CCCcEEEecc------cccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEec-------cCCcceEE-EE-eCC
Q psy5806 861 GTNRAVFETE------VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYA-------VQSHPYTL-TV-LDY 925 (1332)
Q Consensus 861 G~~~~~l~~~------l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~-------~~~~P~~l-a~-~~~ 925 (1332)
|+....+... ...++||+++.++ ..|+..+. .++|.+++++-..+..+.. .+..|-+| +. +++
T Consensus 168 G~~~~~~~~~~~~~~~~~G~nGIv~~pdg-~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G 245 (334)
T 2p9w_A 168 GKTVSTFAWESGNGGQRPGYSGITFDPHS-NKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGN 245 (334)
T ss_dssp SCCEEEEEECCCCSSSCCSCSEEEEETTT-TEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETT
T ss_pred CCEEeeeeecCCCcccccCcceEEEeCCC-CEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCC
Confidence 9966555422 3347899999999 89999998 9999999988432211221 35677785 44 466
Q ss_pred EE-EEEeCCCCEE
Q psy5806 926 YV-YWTDVQHSKI 937 (1332)
Q Consensus 926 ~i-ywtD~~~~~i 937 (1332)
.+ +.++...+.+
T Consensus 246 ~vllV~~~~~~~~ 258 (334)
T 2p9w_A 246 ESVLVGARAPYAI 258 (334)
T ss_dssp EEEEEEEETTEEE
T ss_pred EEEEEEcCCCCEE
Confidence 55 8888766543
No 152
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.64 E-value=8e-06 Score=94.63 Aligned_cols=177 Identities=10% Similarity=0.038 Sum_probs=112.8
Q ss_pred ecceEEEEeCCCCCCCCcccccCC------ccceEEEEEeCC---CcEEEEEeCC--CCe--EEEEECCCCCCceeEee-
Q psy5806 1020 RFGVIRRISLDTADLLPVTLPFPE------YMSSIFFDYHYS---KNLIYFADMR--SGN--LRTFDMSDSTRIKPIPL- 1085 (1332)
Q Consensus 1020 ~~~~i~~i~l~~~~~~~~~~pi~~------~~~~~~id~d~~---~~~lY~sd~~--~~~--I~~~~l~~g~~~~~i~~- 1085 (1332)
... |..++++........+.+.+ .-+|.||++... ..+||++|-. ..+ |++++.. +...+++.
T Consensus 82 ~G~-I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~--~~~~~~~~~ 158 (355)
T 3sre_A 82 SGK-ILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEE--EKSLLHLKT 158 (355)
T ss_dssp CCE-EEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETT--TTEEEEEEE
T ss_pred CCe-EEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECC--CCEEEEEec
Confidence 455 77777653322222233333 237999998662 3479999866 234 5566643 33333332
Q ss_pred ---cCCCCceeeEEEecCCeEEEEcCC-----------------CceEEEEeeCCceEEEEecCCCCceEEEEcCCCcEE
Q psy5806 1086 ---MNDTIRDNFVIDWVANNIYYIDSQ-----------------MHTINVARSDGQHKKILVNDLMEPLAIAVYPRRGLL 1145 (1332)
Q Consensus 1086 ---~~~~~p~glAvDw~~~~LY~td~~-----------------~~~I~v~~ldG~~~~~~~~~~~~P~~iavdp~~g~L 1145 (1332)
..+..|+++++|. .+.+|+++.- .++| ++++....+++..++..|+|||++|....|
T Consensus 159 ~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~v--yr~d~~~~~~~~~~l~~pNGia~spDg~~l 235 (355)
T 3sre_A 159 IRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFV--TYYSPNDVRVVAEGFDFANGINISPDGKYV 235 (355)
T ss_dssp ECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEE--EEECTTCCEEEEEEESSEEEEEECTTSSEE
T ss_pred cccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEE--EEEECCeEEEeecCCcccCcceECCCCCEE
Confidence 2356899999996 5677777541 2345 444533444566788999999999988899
Q ss_pred EEEecCCCCCCCCCcEEEEecCCCc----eEEEEecCCCCcceEEEecCCCEEEEEEc-CCCeEEEEecC
Q psy5806 1146 FYSHWGLYDNSPTTKIEKVYLDGSY----RTVLVEEDLAFPNELAIDFKQRRLFWADS-TNKRIEYCDFF 1210 (1332)
Q Consensus 1146 ywtd~~~~~~~~~~~I~r~~ldG~~----~~~l~~~~l~~p~glaiD~~~~~LY~~d~-~~~~I~~~d~d 1210 (1332)
|++|... .+|++.++++.. +++ +.. -..|.||++|.+++.||++.. ...+|.+++.+
T Consensus 236 Yvadt~~------~~I~~~~~~~~g~l~~~~~-~~~-~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 236 YIAELLA------HKIHVYEKHANWTLTPLRV-LSF-DTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEEGGG------TEEEEEEECTTSCEEEEEE-EEC-SSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred EEEeCCC------CeEEEEEECCCCcEecCEE-EeC-CCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 9999876 789999987432 222 332 367999999975678998653 33344444444
No 153
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.62 E-value=5.4e-06 Score=102.99 Aligned_cols=188 Identities=8% Similarity=-0.068 Sum_probs=138.1
Q ss_pred CcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC---CceEEEEecCCCC
Q psy5806 1056 KNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD---GQHKKILVNDLME 1132 (1332)
Q Consensus 1056 ~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld---G~~~~~~~~~~~~ 1132 (1332)
.+++|+++...++|..+++.++.-...+- ....|+++++++.++.||+++. .+.|.++++. ++....+..+ ..
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~--~g~~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~~~v~~i~~G-~~ 241 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLD--TGYAVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEPTTVAEIKIG-SE 241 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEE--CSSCEEEEEECTTSCEEEEEET-TSEEEEEETTSSSCCEEEEEECC-SE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEe--CCCCccceEECCCCCEEEEEcC-CCeEEEEECCCCCCcEeEEEecC-CC
Confidence 57899999999999999976443232222 2347899999999999999974 5689999994 4333335445 57
Q ss_pred ceEEEEc----CCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecC-----------CCCcceEEEecCCCEEEEE
Q psy5806 1133 PLAIAVY----PRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEED-----------LAFPNELAIDFKQRRLFWA 1197 (1332)
Q Consensus 1133 P~~iavd----p~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~-----------l~~p~glaiD~~~~~LY~~ 1197 (1332)
|++|+++ |...+||+++... +.|..++.........+... -..+.+|...+.+..+|++
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~------~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~ 315 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWP------PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN 315 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEET------TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE
T ss_pred CceeEEccccCCCCCEEEEEEccC------CeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEE
Confidence 9999999 6777999999765 66777765444433333321 0134578888888889998
Q ss_pred EcCCCeEEEEecCCCceEEE--Ee-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1198 DSTNKRIEYCDFFGRSRKIV--IS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1198 d~~~~~I~~~d~dG~~~~~~--~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
...+++|..+|+.......+ +. ..+|.++.+ ++.+.++|+++..+++|..+|..++
T Consensus 316 ~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~-----~pdgr~~~va~~~sn~V~ViD~~t~ 374 (567)
T 1qks_A 316 VKETGKILLVDYTDLNNLKTTEISAERFLHDGGL-----DGSHRYFITAANARNKLVVIDTKEG 374 (567)
T ss_dssp ETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEE-----CTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred ecCCCeEEEEecCCCccceeeeeeccccccCceE-----CCCCCEEEEEeCCCCeEEEEECCCC
Confidence 88899999999975432222 23 667778888 5678899999999999999999887
No 154
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.61 E-value=1.5e-06 Score=105.70 Aligned_cols=196 Identities=9% Similarity=0.021 Sum_probs=137.2
Q ss_pred CCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEE--ecCCeEEEEc-----------------CCCceEE
Q psy5806 1054 YSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVID--WVANNIYYID-----------------SQMHTIN 1114 (1332)
Q Consensus 1054 ~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvD--w~~~~LY~td-----------------~~~~~I~ 1114 (1332)
+.+++||+.|..+++|.+++++...-.+++.......|+|+++. +.++.||++. ...+.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 35679999999999999999884433333322334579999984 7899999994 3355788
Q ss_pred EEeeCCceEEE-EecCCCCceEEEEcCCCcEEEEEecCCCCC--------CC-----------------------CCcEE
Q psy5806 1115 VARSDGQHKKI-LVNDLMEPLAIAVYPRRGLLFYSHWGLYDN--------SP-----------------------TTKIE 1162 (1332)
Q Consensus 1115 v~~ldG~~~~~-~~~~~~~P~~iavdp~~g~Lywtd~~~~~~--------~~-----------------------~~~I~ 1162 (1332)
++|.+.....- +..+- +|.+++++|..+++|+|....... .. -+.|.
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 88887432222 33342 799999999999999998553000 00 01244
Q ss_pred EEecCC---CceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCc----------eEEEEe---ecccceE
Q psy5806 1163 KVYLDG---SYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRS----------RKIVIS---KVAPYGL 1226 (1332)
Q Consensus 1163 r~~ldG---~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~----------~~~~~~---~~~P~gl 1226 (1332)
.++... +.....+..+ ..|.|+.++++++.+|+++...++|..+|++-.. ..++.. +..|.++
T Consensus 258 VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~ 336 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHT 336 (595)
T ss_dssp EEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEE
T ss_pred EEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceE
Confidence 444432 1101223222 4799999999999999999999999999998321 122323 8899999
Q ss_pred EEecCCccccccEEEEEECCCCEEEEEEecC
Q psy5806 1227 SVRQSPGKAFIVELYWTDWEAMSVVIAREKS 1257 (1332)
Q Consensus 1227 av~~~~~~~~~~~lYwtd~~~~~V~~~~~~~ 1257 (1332)
++ ++ +|++|.+.+.+++|.+++..+
T Consensus 337 aF-----~~-dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 337 AF-----DG-RGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EE-----CT-TSEEEEEETTTTEEEEEEHHH
T ss_pred EE-----CC-CCeEEEEEecCCcEEEEEhhH
Confidence 99 33 449999999999999999765
No 155
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.60 E-value=1.2e-06 Score=95.94 Aligned_cols=154 Identities=11% Similarity=-0.003 Sum_probs=110.8
Q ss_pred ceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCC
Q psy5806 1091 RDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGS 1169 (1332)
Q Consensus 1091 p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~ 1169 (1332)
..||+++ ++.||++....++|.+++++ |+....+........||+++ +++||.+.|.+ +.+...+....
T Consensus 57 tqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~--g~~Ly~ltw~~------~~v~V~D~~Tl 126 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASD--GERLYQLTWTE------GLLFTWSGMPP 126 (268)
T ss_dssp EEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEEC--SSCEEEEESSS------CEEEEEETTTT
T ss_pred cceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEe--CCEEEEEEccC------CEEEEEECCcC
Confidence 3799999 79999999998889999987 55443342221223446665 56999999987 88999998665
Q ss_pred ceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe-------ecccceEEEecCCccccccEEEE
Q psy5806 1170 YRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS-------KVAPYGLSVRQSPGKAFIVELYW 1242 (1332)
Q Consensus 1170 ~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~-------~~~P~glav~~~~~~~~~~~lYw 1242 (1332)
....-+... ..+-||+- ++++||.+| ++++|..+|........-+. ...+..|.. .+++||.
T Consensus 127 ~~~~ti~~~-~eGwGLt~--Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~-------~dG~lya 195 (268)
T 3nok_A 127 QRERTTRYS-GEGWGLCY--WNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELEC-------ANGVIYA 195 (268)
T ss_dssp EEEEEEECS-SCCCCEEE--ETTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE-------ETTEEEE
T ss_pred cEEEEEeCC-CceeEEec--CCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEE-------eCCEEEE
Confidence 544444432 33446664 589999999 58999999987544222222 224456677 6889999
Q ss_pred EECCCCEEEEEEecCCCCcceEEEEe
Q psy5806 1243 TDWEAMSVVIAREKSDTGQWDVHLIR 1268 (1332)
Q Consensus 1243 td~~~~~V~~~~~~~g~~~~~~~~~~ 1268 (1332)
..|.++.|.++|..+| +....+.
T Consensus 196 nvw~s~~I~vIDp~TG---~V~~~Id 218 (268)
T 3nok_A 196 NIWHSSDVLEIDPATG---TVVGVID 218 (268)
T ss_dssp EETTCSEEEEECTTTC---BEEEEEE
T ss_pred EECCCCeEEEEeCCCC---cEEEEEE
Confidence 9999999999999999 6655554
No 156
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.60 E-value=4e-06 Score=91.95 Aligned_cols=179 Identities=12% Similarity=0.182 Sum_probs=119.1
Q ss_pred eEEEEeec----ceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCC
Q psy5806 1014 FLLYTSRF----GVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDT 1089 (1332)
Q Consensus 1014 ~ll~~~~~----~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~ 1089 (1332)
+|+.++.. . |+.+++++..... ..+++.-....|++++ +++||.++...+.++.+++++......+-.
T Consensus 54 ~LyestG~~g~S~-v~~vD~~Tgkv~~-~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~---- 125 (262)
T 3nol_A 54 YFYESTGLNGRSS-IRKVDIESGKTLQ-QIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVRSFNY---- 125 (262)
T ss_dssp EEEEEEEETTEEE-EEEECTTTCCEEE-EEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEEEEEC----
T ss_pred EEEEECCCCCCce-EEEEECCCCcEEE-EEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEEEEEC----
Confidence 56666643 5 8888876543221 1223322223566665 679999999999999999875544444432
Q ss_pred CceeeEEEecCCeEEEEcCCCceEEEEeeCC-ceEEEEec-----CCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEE
Q psy5806 1090 IRDNFVIDWVANNIYYIDSQMHTINVARSDG-QHKKILVN-----DLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEK 1163 (1332)
Q Consensus 1090 ~p~glAvDw~~~~LY~td~~~~~I~v~~ldG-~~~~~~~~-----~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r 1163 (1332)
.++|.++.+.++.||.+|. .++|.++|... +....+.. .+..++.+... +|.||...|.. ..|.+
T Consensus 126 ~~eG~glt~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~~------~~I~v 196 (262)
T 3nol_A 126 DGEGWGLTHNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVWQT------NKIVR 196 (262)
T ss_dssp SSCCCCEEECSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTS------SEEEE
T ss_pred CCCceEEecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEccC------CeEEE
Confidence 1355555555999999996 67899998874 43333322 12344556654 78999998876 78999
Q ss_pred EecCCCceEEEEec-C-----------CCCcceEEEecCCCEEEEEEcCCCeEEEEec
Q psy5806 1164 VYLDGSYRTVLVEE-D-----------LAFPNELAIDFKQRRLFWADSTNKRIEYCDF 1209 (1332)
Q Consensus 1164 ~~ldG~~~~~l~~~-~-----------l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~ 1209 (1332)
++..-......+.. + ..-|||||+|+++++||++-..=.+++.+.+
T Consensus 197 IDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 197 IDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp ECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred EECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 99965555444432 1 2368999999999999999877667777655
No 157
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.57 E-value=6.9e-07 Score=107.99 Aligned_cols=157 Identities=15% Similarity=0.120 Sum_probs=111.1
Q ss_pred eecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEEE--Eec------CCCCceEEEEcCC---CcEEEEEecC
Q psy5806 1084 PLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKKI--LVN------DLMEPLAIAVYPR---RGLLFYSHWG 1151 (1332)
Q Consensus 1084 ~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~~--~~~------~~~~P~~iavdp~---~g~Lywtd~~ 1151 (1332)
+..++..|.+||+++. ++||+++...++|.+++.+ |....+ +.. +...+.+||++|. +++||++...
T Consensus 22 ~a~~l~~P~~~a~~pd-G~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~ 100 (454)
T 1cru_A 22 ILSNLNKPHALLWGPD-NQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTF 100 (454)
T ss_dssp EECCCSSEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred EECCCCCceEEEEcCC-CcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEec
Confidence 3467889999999975 5699999877788888764 654433 222 2345669999997 9999999864
Q ss_pred CCC---CC---CCCcEEEEecCCC-----ceEEEEe----cCCCCcceEEEecCCCEEEEEEcC----------------
Q psy5806 1152 LYD---NS---PTTKIEKVYLDGS-----YRTVLVE----EDLAFPNELAIDFKQRRLFWADST---------------- 1200 (1332)
Q Consensus 1152 ~~~---~~---~~~~I~r~~ldG~-----~~~~l~~----~~l~~p~glaiD~~~~~LY~~d~~---------------- 1200 (1332)
... +. ...+|.|..+++. ..++|+. .....+.+|++++++ +||++...
T Consensus 101 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG-~Lyv~~Gd~~~~~~~~~~~~~~~~ 179 (454)
T 1cru_A 101 KNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQ-KIYYTIGDQGRNQLAYLFLPNQAQ 179 (454)
T ss_dssp ECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTS-CEEEEECCTTTTSGGGTTSCCCTT
T ss_pred cccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCC-eEEEEECCCCCCCccccccccccc
Confidence 100 00 1358999998653 2344443 234668999999865 79998432
Q ss_pred ----------------CCeEEEEecCCC-----------ceEEEEe-ecccceEEEecCCccccccEEEEEECCCC
Q psy5806 1201 ----------------NKRIEYCDFFGR-----------SRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAM 1248 (1332)
Q Consensus 1201 ----------------~~~I~~~d~dG~-----------~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~ 1248 (1332)
.++|.|++.||+ ..++... ..+|+||++ ++ .+.||+++...+
T Consensus 180 ~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~-----dp-~G~L~~~d~g~~ 249 (454)
T 1cru_A 180 HTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAF-----TP-NGKLLQSEQGPN 249 (454)
T ss_dssp CCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEE-----CT-TSCEEEEEECSS
T ss_pred cccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEE-----CC-CCCEEEEecCCC
Confidence 478999999998 3455555 889999999 33 688999997544
No 158
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.57 E-value=6.7e-06 Score=96.79 Aligned_cols=199 Identities=11% Similarity=0.029 Sum_probs=133.1
Q ss_pred CccceEEEEEeCCCcEEEEEeCCC------CeEEEEECCCCCCceeEeecCCCCceeeE----EEecCCeEEEEcC----
Q psy5806 1043 EYMSSIFFDYHYSKNLIYFADMRS------GNLRTFDMSDSTRIKPIPLMNDTIRDNFV----IDWVANNIYYIDS---- 1108 (1332)
Q Consensus 1043 ~~~~~~~id~d~~~~~lY~sd~~~------~~I~~~~l~~g~~~~~i~~~~~~~p~glA----vDw~~~~LY~td~---- 1108 (1332)
+...|..+...+.+ ||++...+ +.|..++..++.-...+ .....|.+++ +.+..+.+|.++.
T Consensus 136 g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~--~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~ 211 (462)
T 2ece_A 136 GYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFEPLGKW--EIDRGDQYLAYDFWWNLPNEVLVSSEWAVPN 211 (462)
T ss_dssp CEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCCEEEEC--CSBCTTCCCCCCEEEETTTTEEEECBCCCHH
T ss_pred CCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCeEEEEE--ccCCCCccccceEEECCCCCEEEEccCcCcc
Confidence 44467888888776 99987665 67998885532222111 1122455555 4556777877762
Q ss_pred --------------CCceEEEEeeCCc-eEEEEecC--CCCceEEEE--cCCCcEEEEEec-----CCCCCCCCCcEEEE
Q psy5806 1109 --------------QMHTINVARSDGQ-HKKILVND--LMEPLAIAV--YPRRGLLFYSHW-----GLYDNSPTTKIEKV 1164 (1332)
Q Consensus 1109 --------------~~~~I~v~~ldG~-~~~~~~~~--~~~P~~iav--dp~~g~Lywtd~-----~~~~~~~~~~I~r~ 1164 (1332)
..++|.+++++.. ....+..+ -..|+.|++ +|...++|++.. .. +.|...
T Consensus 212 ~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Ls------s~V~v~ 285 (462)
T 2ece_A 212 TIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLS------SSIWLW 285 (462)
T ss_dssp HHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCC------EEEEEE
T ss_pred ccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCC------ceEEEE
Confidence 3689999999853 23334332 146898877 998889999986 44 567776
Q ss_pred ecCCCceEE---E-Eec-----C-----------CCCcceEEEecCCCEEEEEEcCCCeEEEEecC-CCceEEEEe---e
Q psy5806 1165 YLDGSYRTV---L-VEE-----D-----------LAFPNELAIDFKQRRLFWADSTNKRIEYCDFF-GRSRKIVIS---K 1220 (1332)
Q Consensus 1165 ~ldG~~~~~---l-~~~-----~-----------l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~d-G~~~~~~~~---~ 1220 (1332)
..++..-.. | +.+ . -..|.+|.|+++++.||+++...+.|..+|.+ ..+.+.+.. +
T Consensus 286 ~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tG 365 (462)
T 2ece_A 286 FYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLG 365 (462)
T ss_dssp EEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECB
T ss_pred EecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeC
Confidence 665532111 1 111 0 14689999999999999999999999999985 444444433 2
Q ss_pred -c--------------ccceEEEecCCccccccEEEEEE--------C-----CCCEEEEEEec
Q psy5806 1221 -V--------------APYGLSVRQSPGKAFIVELYWTD--------W-----EAMSVVIAREK 1256 (1332)
Q Consensus 1221 -~--------------~P~glav~~~~~~~~~~~lYwtd--------~-----~~~~V~~~~~~ 1256 (1332)
. .|.+|++ +.++.+||+|+ . .+..+++++..
T Consensus 366 G~~~~~~~~~G~~~~ggPr~~~l-----SpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd 424 (462)
T 2ece_A 366 GIFHRADHPAGHKLTGAPQMLEI-----SRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNAN 424 (462)
T ss_dssp TTTTCBCCTTSCCCCSCCCCEEE-----CTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEEC
T ss_pred CeeccccccccccCCCCCCEEEE-----cCCCCEEEEEcCCcccccccccCCCCceEEEEEEec
Confidence 1 5999999 66789999999 4 56677766443
No 159
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.55 E-value=9.2e-06 Score=88.32 Aligned_cols=156 Identities=12% Similarity=0.004 Sum_probs=109.8
Q ss_pred CceeeEEEecCCeEEEEcCC--CceEEEEeeC-CceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEec
Q psy5806 1090 IRDNFVIDWVANNIYYIDSQ--MHTINVARSD-GQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYL 1166 (1332)
Q Consensus 1090 ~p~glAvDw~~~~LY~td~~--~~~I~v~~ld-G~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~l 1166 (1332)
...||++| ++.||.+... .+.|.+++++ |+....+.- ...+.+..+.+.+++||...|.+ +++...+.
T Consensus 22 ftqGL~~~--~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l-~~~~fgeGi~~~~~~ly~ltw~~------~~v~v~D~ 92 (243)
T 3mbr_X 22 FTEGLFYL--RGHLYESTGETGRSSVRKVDLETGRILQRAEV-PPPYFGAGIVAWRDRLIQLTWRN------HEGFVYDL 92 (243)
T ss_dssp CEEEEEEE--TTEEEEEECCTTSCEEEEEETTTCCEEEEEEC-CTTCCEEEEEEETTEEEEEESSS------SEEEEEET
T ss_pred ccccEEEE--CCEEEEECCCCCCceEEEEECCCCCEEEEEeC-CCCcceeEEEEeCCEEEEEEeeC------CEEEEEEC
Confidence 45799999 6899999665 4689999997 554443321 13444443333468999999987 88999998
Q ss_pred CCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe-e------cccceEEEecCCccccccE
Q psy5806 1167 DGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS-K------VAPYGLSVRQSPGKAFIVE 1239 (1332)
Q Consensus 1167 dG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~-~------~~P~glav~~~~~~~~~~~ 1239 (1332)
+......-+... .. |..+..++++||.+| ++++|..+|........-+. . ..+..|.. .+++
T Consensus 93 ~tl~~~~ti~~~-~~--Gwglt~dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~-------~~G~ 161 (243)
T 3mbr_X 93 ATLTPRARFRYP-GE--GWALTSDDSHLYMSD-GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW-------VNGE 161 (243)
T ss_dssp TTTEEEEEEECS-SC--CCEEEECSSCEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE-------ETTE
T ss_pred CcCcEEEEEeCC-CC--ceEEeeCCCEEEEEC-CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE-------eCCE
Confidence 665544444433 33 444556689999999 58899999987544322222 2 33445666 7899
Q ss_pred EEEEECCCCEEEEEEecCCCCcceEEEEe
Q psy5806 1240 LYWTDWEAMSVVIAREKSDTGQWDVHLIR 1268 (1332)
Q Consensus 1240 lYwtd~~~~~V~~~~~~~g~~~~~~~~~~ 1268 (1332)
||...|.++.|.++|..+| +....+.
T Consensus 162 lyanvw~s~~I~vIDp~tG---~V~~~id 187 (243)
T 3mbr_X 162 LLANVWLTSRIARIDPASG---KVVAWID 187 (243)
T ss_dssp EEEEETTTTEEEEECTTTC---BEEEEEE
T ss_pred EEEEECCCCeEEEEECCCC---CEEEEEE
Confidence 9999999999999999999 6655554
No 160
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.48 E-value=3.7e-08 Score=84.76 Aligned_cols=43 Identities=28% Similarity=0.590 Sum_probs=38.8
Q ss_pred ccccCC--CCcceeeeccCCC-ceEEeCCCCceecCCCCCcCCCcc
Q psy5806 392 YQSHCA--PKVCSHICLPNKH-RFTCQCPLGLTLSPDNKSCSESPE 434 (1332)
Q Consensus 392 ~~n~C~--~g~CshlCl~~~~-~~~C~C~~G~~L~~d~~tC~~~~~ 434 (1332)
+.|+|. ||+|+|+|++.++ +|+|+|+.||.|.+|+++|.+..+
T Consensus 4 d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~de 49 (69)
T 1kli_L 4 DQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 49 (69)
T ss_dssp CCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSS
T ss_pred ccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccCccc
Confidence 569998 8999999999998 899999999999999999976543
No 161
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.46 E-value=0.00032 Score=94.24 Aligned_cols=182 Identities=15% Similarity=0.079 Sum_probs=123.3
Q ss_pred ceEEEEEe-CCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCC-CceeeEEEecCCeEEEEcCCCceEE-EEeeCCce
Q psy5806 1046 SSIFFDYH-YSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDT-IRDNFVIDWVANNIYYIDSQMHTIN-VARSDGQH 1122 (1332)
Q Consensus 1046 ~~~~id~d-~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~-~p~glAvDw~~~~LY~td~~~~~I~-v~~ldG~~ 1122 (1332)
.+..++|+ +.+++|.++. .+.|+.+++..+. ... +..... .+..+++. .++.|+++.. ...|. +.++++..
T Consensus 297 ~v~~~~~S~pdG~~la~~~--~~~i~~~~~~~~~-~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS--RGQAFIQDVSGTY-VLK-VPEPLRIRYVRRGGD-TKVAFIHGTR-EGDFLGIYDYRTGK 370 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE--TTEEEEECTTSSB-EEE-CSCCSCEEEEEECSS-SEEEEEEEET-TEEEEEEEETTTCC
T ss_pred ccceeeecCCCCCEEEEEE--cCEEEEEcCCCCc-eEE-ccCCCcceEEeeeEc-CCCeEEEEEC-CCceEEEEECCCCC
Confidence 35688999 9998888876 6788888866332 222 212222 44556666 5667777655 56777 88888765
Q ss_pred EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCC-
Q psy5806 1123 KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTN- 1201 (1332)
Q Consensus 1123 ~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~- 1201 (1332)
...+......+..++++|...+|+++... ..|+..++.+.....+..........++++++++.|.++....
T Consensus 371 ~~~l~~~~~~~~~~~~SpDG~~la~~~~~-------~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~ 443 (1045)
T 1k32_A 371 AEKFEENLGNVFAMGVDRNGKFAVVANDR-------FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKH 443 (1045)
T ss_dssp EEECCCCCCSEEEEEECTTSSEEEEEETT-------SEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECS
T ss_pred ceEecCCccceeeeEECCCCCEEEEECCC-------CeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCcc
Confidence 55544444678899999987788777543 4799999987776666644444457899999999998875432
Q ss_pred --------CeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEEC
Q psy5806 1202 --------KRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDW 1245 (1332)
Q Consensus 1202 --------~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~ 1245 (1332)
+.|...|+++.....+.. ...+.++++ ++++.+|||+..
T Consensus 444 ~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~-----spdG~~l~~~s~ 491 (1045)
T 1k32_A 444 GETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAF-----DADSKNLYYLSY 491 (1045)
T ss_dssp STTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEE-----CTTSCEEEEEES
T ss_pred ccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceE-----cCCCCEEEEEec
Confidence 579999998755333333 445566777 456778888875
No 162
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.46 E-value=4.1e-08 Score=84.50 Aligned_cols=42 Identities=33% Similarity=0.691 Sum_probs=39.4
Q ss_pred CCcccCCCCCCccccccCCC-CccccCCCCeeEccCCcccccc
Q psy5806 969 PNACGSNNGGCSHLCLRNPT-NFTCACPTGILLSADRRSCFSR 1010 (1332)
Q Consensus 969 ~n~C~~~nGgCshlCl~~p~-~~~C~Cp~g~~l~~d~~tC~~~ 1010 (1332)
.|+|+.+||||+|+|+++++ +|+|.|+.||.|..|+++|...
T Consensus 5 ~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~ 47 (69)
T 1kli_L 5 QLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPT 47 (69)
T ss_dssp CCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEEC
T ss_pred cccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccCc
Confidence 68999999999999999999 6999999999999999999853
No 163
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.45 E-value=5.5e-06 Score=99.88 Aligned_cols=200 Identities=11% Similarity=0.050 Sum_probs=123.9
Q ss_pred cceEEEEEeCC---CcEEEEEeCC--C----------CeEEEEECCCCC-------CceeEee----cCCCCceeeEEEe
Q psy5806 1045 MSSIFFDYHYS---KNLIYFADMR--S----------GNLRTFDMSDST-------RIKPIPL----MNDTIRDNFVIDW 1098 (1332)
Q Consensus 1045 ~~~~~id~d~~---~~~lY~sd~~--~----------~~I~~~~l~~g~-------~~~~i~~----~~~~~p~glAvDw 1098 (1332)
..+.+|++++. +++||++-.. . .+|.|+.+..+. ..++++. ........|++++
T Consensus 69 ~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp 148 (463)
T 2wg3_C 69 RGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP 148 (463)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT
T ss_pred CcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC
Confidence 45789999986 7889987532 1 378888876421 1233332 1233566799997
Q ss_pred cCCeEEEEcCC-----------------CceEEEEeeCCc--------------------eEEEEecCCCCceEEEEcCC
Q psy5806 1099 VANNIYYIDSQ-----------------MHTINVARSDGQ--------------------HKKILVNDLMEPLAIAVYPR 1141 (1332)
Q Consensus 1099 ~~~~LY~td~~-----------------~~~I~v~~ldG~--------------------~~~~~~~~~~~P~~iavdp~ 1141 (1332)
.++||++-.. .++|.+++.||. ..++.+.++.+|.+|++||.
T Consensus 149 -DG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~ 227 (463)
T 2wg3_C 149 -DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRH 227 (463)
T ss_dssp -TSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESS
T ss_pred -CCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCC
Confidence 5699998322 356888999984 23455668999999999997
Q ss_pred Cc------EEEEEecCCCCCCCCCcEEEEecCCCce---EEEEecC-C--CCcceEEEecC------CCEEEEEEcCCCe
Q psy5806 1142 RG------LLFYSHWGLYDNSPTTKIEKVYLDGSYR---TVLVEED-L--AFPNELAIDFK------QRRLFWADSTNKR 1203 (1332)
Q Consensus 1142 ~g------~Lywtd~~~~~~~~~~~I~r~~ldG~~~---~~l~~~~-l--~~p~glaiD~~------~~~LY~~d~~~~~ 1203 (1332)
.| +||.+|.... +.....|.++.. |.+. ..++.-. - ..|.|+++-.. .+.+++++.. ++
T Consensus 228 tg~~~G~l~~~~~D~~G~-~~~~~ei~~i~~-G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~ 304 (463)
T 2wg3_C 228 PTDININLTILCSDSNGK-NRSSARILQIIK-GKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GN 304 (463)
T ss_dssp CSSTTCSEEEEEECC-------CEEEEEEC-----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETT-SC
T ss_pred CCCcccceEEEecccCCC-CCCCCeEeeecc-CCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCC-Cc
Confidence 54 7888885220 112345665532 2211 1121111 1 35788888432 3458889876 88
Q ss_pred EEEEecCCCc---e-EEEE--------e--ecccceEEEecCCccccccEEEEEEC-------CCCEEEEEE
Q psy5806 1204 IEYCDFFGRS---R-KIVI--------S--KVAPYGLSVRQSPGKAFIVELYWTDW-------EAMSVVIAR 1254 (1332)
Q Consensus 1204 I~~~d~dG~~---~-~~~~--------~--~~~P~glav~~~~~~~~~~~lYwtd~-------~~~~V~~~~ 1254 (1332)
|.++.+++.. . +.+. . ..+|.++++ +.++.||++++ ..++|+|+.
T Consensus 305 i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~------~pdG~Lyv~~~~~~~~~~~~G~I~Ri~ 370 (463)
T 2wg3_C 305 FLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGE------DELGEVYILSSSKSMTQTHNGKLYKIV 370 (463)
T ss_dssp EEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEE------CTTCCEEEEEESSCGGGCSSEEEEEEE
T ss_pred EEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEE------CCCCCEEEEeccCCcccCCCCcEEEec
Confidence 9999886432 2 2221 1 357899999 56789999997 578899987
No 164
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.42 E-value=2.2e-05 Score=90.44 Aligned_cols=152 Identities=10% Similarity=-0.045 Sum_probs=101.4
Q ss_pred CcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCC-ceEEEEecC-----
Q psy5806 1056 KNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDG-QHKKILVND----- 1129 (1332)
Q Consensus 1056 ~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG-~~~~~~~~~----- 1129 (1332)
++++|++....+.|+.+++.++.....+.......|.++++++.++.||++....+.|.+++++. +....+...
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~ 89 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGE 89 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccc
Confidence 46788888888999999977543333332222226899999998889999998888999999974 433334322
Q ss_pred -CCCceEEEEcCCCcEEEEEecC----CC-CCCCCCcEEEEecCCCc---eEEEEecCCCCcceEEEecCCCEEEEEEcC
Q psy5806 1130 -LMEPLAIAVYPRRGLLFYSHWG----LY-DNSPTTKIEKVYLDGSY---RTVLVEEDLAFPNELAIDFKQRRLFWADST 1200 (1332)
Q Consensus 1130 -~~~P~~iavdp~~g~Lywtd~~----~~-~~~~~~~I~r~~ldG~~---~~~l~~~~l~~p~glaiD~~~~~LY~~d~~ 1200 (1332)
...|.+++++|...+||++... .. .....+.|...++.... ...... .-..+.+++++++++ ||++.
T Consensus 90 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~-- 165 (349)
T 1jmx_B 90 VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG-- 165 (349)
T ss_dssp EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES--
T ss_pred ccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEcc--
Confidence 1238999999988899999843 00 00012578988886522 112222 224578899998887 88853
Q ss_pred CCeEEEEecCCC
Q psy5806 1201 NKRIEYCDFFGR 1212 (1332)
Q Consensus 1201 ~~~I~~~d~dG~ 1212 (1332)
+.|..+|....
T Consensus 166 -~~i~~~d~~~~ 176 (349)
T 1jmx_B 166 -PDIYKMDVKTG 176 (349)
T ss_dssp -SSEEEECTTTC
T ss_pred -CcEEEEeCCCC
Confidence 34888888543
No 165
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=98.38 E-value=1.2e-07 Score=76.56 Aligned_cols=39 Identities=36% Similarity=0.983 Sum_probs=36.3
Q ss_pred ccCCCCCCccccccCCCCccccCCCCeeEccCCcccccc
Q psy5806 972 CGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSR 1010 (1332)
Q Consensus 972 C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~ 1010 (1332)
|+.+||+|+|+|++++++|+|.|+.||.|..|+++|.+.
T Consensus 1 C~~~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~di 39 (51)
T 1kig_L 1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVST 39 (51)
T ss_dssp CCTTTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEEC
T ss_pred CCCCCCCcCCEeEcCCCCeEEeCCCCcEECCCCCccccC
Confidence 677899999999999999999999999999999999854
No 166
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.36 E-value=0.0001 Score=88.07 Aligned_cols=220 Identities=8% Similarity=0.040 Sum_probs=149.2
Q ss_pred EEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCC--CeEEEEECCCCCCceeEeecCCCCceeeEEEecCC
Q psy5806 1024 IRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRS--GNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVAN 1101 (1332)
Q Consensus 1024 i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~--~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~ 1101 (1332)
|+..+++.... ..+. .....+..++|++.+++|+++.... ..|+..++.++.. ..+. ...+.+..+++.+.++
T Consensus 161 i~i~d~~g~~~-~~l~--~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~-~~l~-~~~~~~~~~~~spdg~ 235 (415)
T 2hqs_A 161 LRVSDYDGYNQ-FVVH--RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-RQVA-SFPRHNGAPAFSPDGS 235 (415)
T ss_dssp EEEEETTSCSC-EEEE--EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EEEE-CCSSCEEEEEECTTSS
T ss_pred EEEEcCCCCCC-EEEe--CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE-EEee-cCCCcccCEEEcCCCC
Confidence 77777763221 1111 1223467899999999999987544 5899999874432 2332 3344678899998899
Q ss_pred eEEEEcCC--CceEEEEeeCCceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCC
Q psy5806 1102 NIYYIDSQ--MHTINVARSDGQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDL 1179 (1332)
Q Consensus 1102 ~LY~td~~--~~~I~v~~ldG~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l 1179 (1332)
.|+++... ...|.++++++.....+.........++.+|...+|+++.... ...+|++.++++.....+.. .-
T Consensus 236 ~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~----g~~~i~~~d~~~~~~~~l~~-~~ 310 (415)
T 2hqs_A 236 KLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQA----GRPQVYKVNINGGAPQRITW-EG 310 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTT----SSCEEEEEETTSSCCEECCC-SS
T ss_pred EEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCC----CCcEEEEEECCCCCEEEEec-CC
Confidence 89877543 4468888987554444444445678899999777788776422 24689999998876554433 22
Q ss_pred CCcceEEEecCCCEEEEEEcC--CCeEEEEecCCCceEEEEeecccceEEEecCCccccccEEEEEECCCC--EEEEEEe
Q psy5806 1180 AFPNELAIDFKQRRLFWADST--NKRIEYCDFFGRSRKIVISKVAPYGLSVRQSPGKAFIVELYWTDWEAM--SVVIARE 1255 (1332)
Q Consensus 1180 ~~p~glaiD~~~~~LY~~d~~--~~~I~~~d~dG~~~~~~~~~~~P~glav~~~~~~~~~~~lYwtd~~~~--~V~~~~~ 1255 (1332)
.....++++++++.|+++... ...|...|+++...+.+.......++++ .+.+.+|+++....+ .|+.++.
T Consensus 311 ~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~-----spdg~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 311 SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSL-----APNGTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEE-----CTTSSEEEEEEEETTEEEEEEEET
T ss_pred CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEE-----cCCCCEEEEEEcCCCccEEEEEEC
Confidence 445678999999999998765 4589999998766544433335677777 445677888776555 7899987
Q ss_pred cCC
Q psy5806 1256 KSD 1258 (1332)
Q Consensus 1256 ~~g 1258 (1332)
.++
T Consensus 386 ~g~ 388 (415)
T 2hqs_A 386 DGR 388 (415)
T ss_dssp TSC
T ss_pred CCC
Confidence 644
No 167
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.36 E-value=6.9e-05 Score=86.97 Aligned_cols=145 Identities=14% Similarity=0.124 Sum_probs=108.2
Q ss_pred CceeeEEEec-------CCeEEEEcCCCceEEEEeeC-CceEEEEec-------------C-----CCCceEEEEcCC--
Q psy5806 1090 IRDNFVIDWV-------ANNIYYIDSQMHTINVARSD-GQHKKILVN-------------D-----LMEPLAIAVYPR-- 1141 (1332)
Q Consensus 1090 ~p~glAvDw~-------~~~LY~td~~~~~I~v~~ld-G~~~~~~~~-------------~-----~~~P~~iavdp~-- 1141 (1332)
....|+||-. .+.+|+||.....|.|.++. |+..+++.. + .....+||++|.
T Consensus 153 ~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~ 232 (381)
T 3q6k_A 153 YFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDS 232 (381)
T ss_dssp GEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCT
T ss_pred ccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcC
Confidence 4678999932 57899999999999999997 555554421 1 135678999997
Q ss_pred --CcEEEEEecCCCCCCCCCcEEEEec----C---CCceEEEEecC-CCCcceEEEecCCCEEEEEEcCCCeEEEEecCC
Q psy5806 1142 --RGLLFYSHWGLYDNSPTTKIEKVYL----D---GSYRTVLVEED-LAFPNELAIDFKQRRLFWADSTNKRIEYCDFFG 1211 (1332)
Q Consensus 1142 --~g~Lywtd~~~~~~~~~~~I~r~~l----d---G~~~~~l~~~~-l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG 1211 (1332)
.+.|||.-..+ .+++++.. + ....+.+...+ .....++++|..++.||+++...+.|.+.+.++
T Consensus 233 ~~~~~LYf~plss------~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 233 EGNRPAYYLAGSA------IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp TSCCEEEEEESSC------SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred CCCeEEEEEECCC------CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 78999998665 67888873 2 22333444432 234457889878899999999999999999988
Q ss_pred -----CceEEEEe---ecccceEEEecCCccccccEEEEEECC
Q psy5806 1212 -----RSRKIVIS---KVAPYGLSVRQSPGKAFIVELYWTDWE 1246 (1332)
Q Consensus 1212 -----~~~~~~~~---~~~P~glav~~~~~~~~~~~lYwtd~~ 1246 (1332)
.+..+++. +..|.+|++ +.+++||++...
T Consensus 307 ~~~~~~n~~~l~~d~~l~~pd~~~i------~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 307 MPLRMKNTDVVYTSSRFVFGTDISV------DSKGGLWFMSNG 343 (381)
T ss_dssp CSBCGGGEEEEEECTTCCSEEEEEE------CTTSCEEEEECS
T ss_pred CccccCceEEEEECCCccccCeEEE------CCCCeEEEEECc
Confidence 35566665 889999999 558899998854
No 168
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=98.36 E-value=1.2e-07 Score=79.05 Aligned_cols=38 Identities=29% Similarity=0.850 Sum_probs=35.7
Q ss_pred ccCCCCCCccccccCC-CCccccCCCCeeEccCCccccc
Q psy5806 972 CGSNNGGCSHLCLRNP-TNFTCACPTGILLSADRRSCFS 1009 (1332)
Q Consensus 972 C~~~nGgCshlCl~~p-~~~~C~Cp~g~~l~~d~~tC~~ 1009 (1332)
|+.+||+|+|+|++++ ++|+|.|+.||.|..|+++|.+
T Consensus 2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d 40 (59)
T 2wph_E 2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEP 40 (59)
T ss_dssp TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEE
T ss_pred CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccC
Confidence 7888999999999999 5899999999999999999985
No 169
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.33 E-value=3.6e-05 Score=86.63 Aligned_cols=193 Identities=11% Similarity=0.021 Sum_probs=132.6
Q ss_pred cEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEEEecC-CCCceE
Q psy5806 1057 NLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKILVND-LMEPLA 1135 (1332)
Q Consensus 1057 ~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~~~~~-~~~P~~ 1135 (1332)
+.+++++...+.|+.++..+|.....+-......+.++++++. ++||++. .+.|..++.+|+..-.+... ...+.+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pd-G~ilvs~--~~~V~~~d~~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKA-GEILFSY--SKGAKMITRDGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTT-SCEEEEC--BSEEEEECTTSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCC-CCEEEeC--CCCEEEECCCCCEEEEEcCCCCccccc
Confidence 4566666667777777754444333333222235888999864 5666643 56788899888865554432 135677
Q ss_pred EEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEe-cC----CCCcceEEEecCCCEEEEEEcCCCeEEEEecC
Q psy5806 1136 IAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVE-ED----LAFPNELAIDFKQRRLFWADSTNKRIEYCDFF 1210 (1332)
Q Consensus 1136 iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~-~~----l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~d 1210 (1332)
+++.| +|.+++++.+. ..+|+.++.+|+....+-. .. ...|.+++++.+ +.+++++...++|..+|.+
T Consensus 82 ~~~~~-dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~-G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 82 ARILP-DGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK-GNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp EEECT-TSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT-SCEEEEETTTTEEEEECTT
T ss_pred cEECC-CCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC-CCEEEEecCCCEEEEECCC
Confidence 88888 78888888762 2689999999986555431 11 235677888865 4566788899999999999
Q ss_pred CCceEEEEeecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEe
Q psy5806 1211 GRSRKIVISKVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIR 1268 (1332)
Q Consensus 1211 G~~~~~~~~~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~ 1268 (1332)
|+....+-....|+++++ ..++.+++++...++|+.+++.+| +.+..+.
T Consensus 155 G~~~w~~~~~~~~~~~~~------~~~g~~~v~~~~~~~v~~~d~~tG---~~~w~~~ 203 (276)
T 3no2_A 155 GQLLNSVKLSGTPFSSAF------LDNGDCLVACGDAHCFVQLNLESN---RIVRRVN 203 (276)
T ss_dssp SCEEEEEECSSCCCEEEE------CTTSCEEEECBTTSEEEEECTTTC---CEEEEEE
T ss_pred CCEEEEEECCCCccceeE------cCCCCEEEEeCCCCeEEEEeCcCC---cEEEEec
Confidence 765444333567888888 357889999999999999999988 5555554
No 170
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=98.33 E-value=1.1e-07 Score=77.33 Aligned_cols=39 Identities=36% Similarity=0.778 Sum_probs=36.1
Q ss_pred ccCCCCCCccccccCCC-CccccCCCCeeEccCCcccccc
Q psy5806 972 CGSNNGGCSHLCLRNPT-NFTCACPTGILLSADRRSCFSR 1010 (1332)
Q Consensus 972 C~~~nGgCshlCl~~p~-~~~C~Cp~g~~l~~d~~tC~~~ 1010 (1332)
|+.+||+|+|+|+++++ +|+|.|+.||.|..|+++|.+.
T Consensus 2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~ 41 (53)
T 2bz6_L 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPT 41 (53)
T ss_dssp TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEEC
T ss_pred CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccCC
Confidence 78889999999999999 5999999999999999999854
No 171
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.31 E-value=1.5e-07 Score=77.35 Aligned_cols=41 Identities=24% Similarity=0.675 Sum_probs=37.0
Q ss_pred ccCC--CCcceeeeccCCCceEEeCCCCceecCCCCCcCCCcc
Q psy5806 394 SHCA--PKVCSHICLPNKHRFTCQCPLGLTLSPDNKSCSESPE 434 (1332)
Q Consensus 394 n~C~--~g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~~~~~ 434 (1332)
|+|+ +++|+|+|++.+++|+|.|+.||+|..|+++|.+..+
T Consensus 2 dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~dide 44 (55)
T 2jkh_L 2 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGP 44 (55)
T ss_dssp CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred ccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeeccCcc
Confidence 6887 6889999999999999999999999999999976543
No 172
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.29 E-value=3.3e-07 Score=94.65 Aligned_cols=40 Identities=30% Similarity=0.734 Sum_probs=35.2
Q ss_pred CCCCCCCCEEec--CCCEEEeeeecCCCCCCCCCCCcc--cccc
Q psy5806 56 PKKCSPDEHRCT--TGHCILKTWLCDGIPDCSLGEDER--NCNK 95 (1332)
Q Consensus 56 ~~~C~~~~f~C~--~g~Ci~~~~~CDg~~DC~DgsDE~--~C~~ 95 (1332)
...|.+.+|+|. +|.||+..|+|||..||+|||||. +|..
T Consensus 50 ~~~C~~~eFqC~~~~g~CIp~~wvCDG~~DC~DGSDE~~~~C~~ 93 (220)
T 2gtl_N 50 GTHCEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDVCDT 93 (220)
T ss_dssp CCSSCTTEEECCSSSCCEEETTTTTSSSCCSTTCTTSCGGGGCG
T ss_pred CCCCCCCccCcCCCCCcEeCcceecCCCCCCCCCCccCcccCCC
Confidence 356888999995 689999999999999999999995 7864
No 173
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.29 E-value=3.2e-07 Score=95.96 Aligned_cols=40 Identities=35% Similarity=0.805 Sum_probs=35.6
Q ss_pred CCCCCCCCEEecC--CCEEEeeeecCCCCCCCCCCCcc--cccc
Q psy5806 56 PKKCSPDEHRCTT--GHCILKTWLCDGIPDCSLGEDER--NCNK 95 (1332)
Q Consensus 56 ~~~C~~~~f~C~~--g~Ci~~~~~CDg~~DC~DgsDE~--~C~~ 95 (1332)
...|++.+|+|.+ |.||+..|+|||..||+|||||. +|..
T Consensus 51 ~~~C~~~~F~C~~~~g~CI~~~~~CDG~~DC~DgSDE~~~~C~~ 94 (217)
T 2gtl_M 51 EHHCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDEDPETCSL 94 (217)
T ss_dssp CCCCCTTEEECSSSSCCEEEGGGTTSSSCCSSSSTTTSHHHHCC
T ss_pred CCCCCCCceecCCCCCcEechhhccCCCCCCCCCCccccCcCCC
Confidence 4579999999965 99999999999999999999997 6754
No 174
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.29 E-value=0.022 Score=70.29 Aligned_cols=209 Identities=9% Similarity=0.049 Sum_probs=137.3
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKI 1125 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~ 1125 (1332)
.+.+++|++.++.|.... ..+.|...+.+ +.....+. .....+.+|++++.++.|..+. ..+.|.+++.+++....
T Consensus 346 ~v~~~~~s~~g~~l~~~~-~dg~v~~~~~~-~~~~~~~~-~~~~~v~~~~~s~dg~~l~~~~-~d~~v~~~~~~~~~~~~ 421 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASAS-DDKTVKLWNRN-GQLLQTLT-GHSSSVRGVAFSPDGQTIASAS-DDKTVKLWNRNGQLLQT 421 (577)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSEEEEEETT-CCEEEEEE-CCSSCEEEEEECTTSSCEEEEE-TTSEEEEECTTCCEEEE
T ss_pred CEEEEEECCCCCEEEEEe-CCCEEEEEcCC-CCEEEEec-CCCCCeEEEEECCCCCEEEEEe-CCCEEEEEeCCCCEEEE
Confidence 356888998887776654 66778877754 43333332 2345678999998777776554 45689999998887666
Q ss_pred EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEE
Q psy5806 1126 LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIE 1205 (1332)
Q Consensus 1126 ~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~ 1205 (1332)
+..-.....+|+++|...+|..+... ..|..-++++.....+.. .-.....+++.++++.|..+ ...+.|.
T Consensus 422 ~~~~~~~v~~~~~s~d~~~l~~~~~d-------~~v~~w~~~~~~~~~~~~-~~~~v~~~~~spd~~~las~-~~d~~i~ 492 (577)
T 2ymu_A 422 LTGHSSSVWGVAFSPDDQTIASASDD-------KTVKLWNRNGQLLQTLTG-HSSSVRGVAFSPDGQTIASA-SDDKTVK 492 (577)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTSCEEEEEEC-CSSCEEEEEECTTSCEEEEE-ETTSEEE
T ss_pred ecCCCCCeEEEEECCCCCEEEEEcCC-------CEEEEEECCCCEEEEEcC-CCCCEEEEEEcCCCCEEEEE-eCCCEEE
Confidence 65444567899999976666555432 457777788766555443 23566789999887777655 4567888
Q ss_pred EEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEecCCCCeeeE
Q psy5806 1206 YCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRSNQEDFLNI 1277 (1332)
Q Consensus 1206 ~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~~~~~~~~i 1277 (1332)
..+.+|...+.+.. .....+|++ .+.+.+|..+ ...+.|...+. ++ .....+......+..+
T Consensus 493 iw~~~~~~~~~~~~h~~~v~~l~~-----s~dg~~l~s~-~~dg~v~lwd~-~~---~~~~~~~~h~~~v~~~ 555 (577)
T 2ymu_A 493 LWNRNGQLLQTLTGHSSSVRGVAF-----SPDGQTIASA-SDDKTVKLWNR-NG---QLLQTLTGHSSSVWGV 555 (577)
T ss_dssp EEETTSCEEEEEECCSSCEEEEEE-----CTTSSCEEEE-ETTSEEEEECT-TS---CEEEEEECCSSCEEEE
T ss_pred EEcCCCCEEEEEeCCCCCEEEEEE-----cCCCCEEEEE-ECcCEEEEEeC-CC---CEEEEEcCCCCCEEEE
Confidence 88988876555544 556678888 2334445444 46678888874 45 4455555444444444
No 175
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.27 E-value=1.9e-07 Score=76.76 Aligned_cols=42 Identities=24% Similarity=0.793 Sum_probs=38.4
Q ss_pred CCcccCCCCCCccccccCCCCccccCCCCeeEccCCcccccc
Q psy5806 969 PNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSR 1010 (1332)
Q Consensus 969 ~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~ 1010 (1332)
.++|+.+||+|+|+|++++++|+|.|+.||.|..|+++|...
T Consensus 1 ~dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~di 42 (55)
T 2jkh_L 1 RKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPT 42 (55)
T ss_dssp -CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEES
T ss_pred CccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeeccC
Confidence 368998899999999999999999999999999999999854
No 176
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.27 E-value=0.041 Score=75.05 Aligned_cols=151 Identities=6% Similarity=-0.071 Sum_probs=93.3
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKK 1124 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~ 1124 (1332)
.+.+++|++.++.|+.+. ..+.|+..++.++.....+. ...+.+..+++.+.++.|..+. ..+.|.++++. |+...
T Consensus 1087 ~v~~~~~s~d~~~l~s~s-~d~~v~iwd~~~~~~~~~l~-~h~~~v~~~~~s~dg~~lat~~-~dg~i~vwd~~~~~~~~ 1163 (1249)
T 3sfz_A 1087 TVLSCAISSDATKFSSTS-ADKTAKIWSFDLLSPLHELK-GHNGCVRCSAFSLDGILLATGD-DNGEIRIWNVSDGQLLH 1163 (1249)
T ss_dssp CCCCEEECSSSSSCEEEC-CSSCCCEECSSSSSCSBCCC-CCSSCEEEEEECSSSSEEEEEE-TTSCCCEEESSSSCCCC
T ss_pred cEEEEEECCCCCEEEEEc-CCCcEEEEECCCcceeeeec-cCCCcEEEEEECCCCCEEEEEe-CCCEEEEEECCCCceEE
Confidence 356888998877665554 67788888877554443332 2334578899998777776554 45678899987 44322
Q ss_pred EE---------ecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEE
Q psy5806 1125 IL---------VNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLF 1195 (1332)
Q Consensus 1125 ~~---------~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY 1195 (1332)
.+ ......+.+++++|...+|+.++ + .|...++........+...-.....+++.++++.|+
T Consensus 1164 ~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~-g--------~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~ 1234 (1249)
T 3sfz_A 1164 SCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG-G--------YLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYV 1234 (1249)
T ss_dssp CCCCCC-------CCSCCCEEEECTTSSCEEEES-S--------SEEEBCSSSCBCCCCCCCSSCCCCCCEECSSSCCEE
T ss_pred EeccccccccccccCceEEEEEECCCCCEEEECC-C--------eEEEEECCCCceeeeeeccCCcccEEEECCCCCEEE
Confidence 11 12234578999999766676553 3 366666654443222222234456789998887777
Q ss_pred EEEcCCCeEEEEec
Q psy5806 1196 WADSTNKRIEYCDF 1209 (1332)
Q Consensus 1196 ~~d~~~~~I~~~d~ 1209 (1332)
.++ ..+.|...++
T Consensus 1235 ~~~-~dg~v~vw~l 1247 (1249)
T 3sfz_A 1235 TVD-NLGILYILQV 1247 (1249)
T ss_dssp EEC-TTCCEEEECC
T ss_pred Eec-CCcEEEEEee
Confidence 664 4566665543
No 177
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=98.27 E-value=2.2e-07 Score=75.66 Aligned_cols=39 Identities=28% Similarity=0.687 Sum_probs=34.7
Q ss_pred CC--CCcceeeeccCCC-ceEEeCCCCceecCCCCCcCCCcc
Q psy5806 396 CA--PKVCSHICLPNKH-RFTCQCPLGLTLSPDNKSCSESPE 434 (1332)
Q Consensus 396 C~--~g~CshlCl~~~~-~~~C~C~~G~~L~~d~~tC~~~~~ 434 (1332)
|+ |++|+|+|++.++ +|+|+|+.||+|.+|+++|.+..+
T Consensus 2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~de 43 (53)
T 2bz6_L 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 43 (53)
T ss_dssp TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSS
T ss_pred CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccCCcc
Confidence 55 7899999999998 799999999999999999986543
No 178
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=98.26 E-value=4.4e-07 Score=110.85 Aligned_cols=79 Identities=22% Similarity=0.397 Sum_probs=57.0
Q ss_pred cccccCCCCCceecCCCCceEeCCcCcCCCCCCCCCCCCCCCCCC---CCCCCCCCCCEEec-CCCEEEeeeecCCCCCC
Q psy5806 9 WVGYLQEIPQYKKCNRTGACIPAQWQCDNEFDCEMGEDEMKCPQA---SPPKKCSPDEHRCT-TGHCILKTWLCDGIPDC 84 (1332)
Q Consensus 9 ~~~~~~c~~~~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE~~C~~~---~~~~~C~~~~f~C~-~g~Ci~~~~~CDg~~DC 84 (1332)
.|. .|...++|-+ .|....++.|..-.....|+..|... ..+..| .+|+|. ||+||+..|+|||+.||
T Consensus 21 ~C~--~C~~~~~R~R----~v~~p~q~gG~~C~~~l~d~~~C~~~~~C~~~~~c--~~f~C~~~g~Ci~~~~~Cdg~~dC 92 (537)
T 3ojy_B 21 TCD--PCQKKRYRYA----YLLQPSQFHGEPCNFSDKEVEDCVTNRPCRSQVRC--EGFVCAQTGRCVNRRLLCNGDNDC 92 (537)
T ss_dssp CCB--TTTTEEEEEC----CEEECEETTCCCCCSCSEEEEECCCCCCCCCCSCC--SSEECTTTCCEECGGGTTSSSCCS
T ss_pred CCC--CCCCceEeee----eeccccccCCCcCccchhhhccCCCccccccCCCC--CccCcCCCCcEeeccccCCCCCCC
Confidence 454 4666666655 57666666555444345777778311 112346 799999 99999999999999999
Q ss_pred CCCCCcccccc
Q psy5806 85 SLGEDERNCNK 95 (1332)
Q Consensus 85 ~DgsDE~~C~~ 95 (1332)
.|||||.+|+.
T Consensus 93 ~d~sdE~~c~~ 103 (537)
T 3ojy_B 93 GDQSDEANCRR 103 (537)
T ss_dssp SSSCTTSSCSS
T ss_pred CCccccccCCC
Confidence 99999999865
No 179
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.25 E-value=5.2e-05 Score=91.39 Aligned_cols=211 Identities=9% Similarity=0.064 Sum_probs=129.5
Q ss_pred CCccceEEEEEeCCCc-EEEEEeCCCCeEEEEECCCCCC-ceeE------eecC-----CCCceeeEEEec---CCeEEE
Q psy5806 1042 PEYMSSIFFDYHYSKN-LIYFADMRSGNLRTFDMSDSTR-IKPI------PLMN-----DTIRDNFVIDWV---ANNIYY 1105 (1332)
Q Consensus 1042 ~~~~~~~~id~d~~~~-~lY~sd~~~~~I~~~~l~~g~~-~~~i------~~~~-----~~~p~glAvDw~---~~~LY~ 1105 (1332)
.++.+|.+|++.+.+. +||+++ ..|+|++++.+ +.. ...+ +..+ .+.+.|||+++. ++.||+
T Consensus 11 ~gL~~P~~~a~~pdG~~rl~V~e-r~G~i~~~~~~-g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv 88 (463)
T 2wg3_C 11 SGLRQPVGALHSGDGSQRLFILE-KEGYVKILTPE-GEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYV 88 (463)
T ss_dssp EEESSEEEEECCSSSSCCEEEEE-TTTEEEEECTT-SCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEE
T ss_pred cCCCCceEEEECCCCCeEEEEEe-CCceEEEEeCC-CCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEE
Confidence 3577899999999874 899998 56899998744 432 1111 1112 346789999974 688999
Q ss_pred EcCC------------CceEEEEeeCC--------ceEEEEe-----cCCCCceEEEEcCCCcEEEEEecCCCC------
Q psy5806 1106 IDSQ------------MHTINVARSDG--------QHKKILV-----NDLMEPLAIAVYPRRGLLFYSHWGLYD------ 1154 (1332)
Q Consensus 1106 td~~------------~~~I~v~~ldG--------~~~~~~~-----~~~~~P~~iavdp~~g~Lywtd~~~~~------ 1154 (1332)
+... ..+|.+++++. ...++|. ...-....|+++| .|+||++--....
T Consensus 89 ~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~ 167 (463)
T 2wg3_C 89 SYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMITLDDME 167 (463)
T ss_dssp EEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCCHHHHH
T ss_pred EEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCCCCccc
Confidence 7532 13666666642 1122321 1223357799999 7899999522110
Q ss_pred -----CCCCCcEEEEecCCCc-------------------eEEEEecCCCCcceEEEecCCC------EEEEEEc-CC--
Q psy5806 1155 -----NSPTTKIEKVYLDGSY-------------------RTVLVEEDLAFPNELAIDFKQR------RLFWADS-TN-- 1201 (1332)
Q Consensus 1155 -----~~~~~~I~r~~ldG~~-------------------~~~l~~~~l~~p~glaiD~~~~------~LY~~d~-~~-- 1201 (1332)
....++|.|++.||+. +..|+..++..|.||++|+.++ +||.+|. +.
T Consensus 168 ~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~ 247 (463)
T 2wg3_C 168 EMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNR 247 (463)
T ss_dssp HCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC-----
T ss_pred cccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCCCCC
Confidence 2235889999999951 2346777899999999999754 6787885 21
Q ss_pred --CeEEEEecCCCc---eEEEEe-----ecccceEEEe-cCCccccccEEEEEECCCCEEEEEEecC
Q psy5806 1202 --KRIEYCDFFGRS---RKIVIS-----KVAPYGLSVR-QSPGKAFIVELYWTDWEAMSVVIAREKS 1257 (1332)
Q Consensus 1202 --~~I~~~d~dG~~---~~~~~~-----~~~P~glav~-~~~~~~~~~~lYwtd~~~~~V~~~~~~~ 1257 (1332)
.+|..+. .|.+ ...++. ...|.|+++. |+---++.+.++++++. ++|.++....
T Consensus 248 ~~~ei~~i~-~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~~ 312 (463)
T 2wg3_C 248 SSARILQII-KGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQSP 312 (463)
T ss_dssp -CEEEEEEC-----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC--
T ss_pred CCCeEeeec-cCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeCC
Confidence 2344432 2321 112222 2578999981 11111345568999997 7899887654
No 180
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=98.24 E-value=3e-07 Score=76.50 Aligned_cols=39 Identities=31% Similarity=0.851 Sum_probs=35.9
Q ss_pred CcCCCCCCccccccCCCCCceeeCCCCccccCCCCcccc
Q psy5806 666 CNENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSE 704 (1332)
Q Consensus 666 C~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~ 704 (1332)
|+.+||+|+|+|+..+.++|+|+|+.||+|.+|+++|.+
T Consensus 2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d 40 (59)
T 2wph_E 2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEP 40 (59)
T ss_dssp TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEE
T ss_pred CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccC
Confidence 778899999999999844999999999999999999985
No 181
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.24 E-value=9.5e-05 Score=87.07 Aligned_cols=198 Identities=13% Similarity=0.003 Sum_probs=133.6
Q ss_pred CCCcEEEEEeCCCCeEEEEECCCC-CCce--eEe-------ecCCCCceeeEEEecCCeEEEEcCCC------ceEEEEe
Q psy5806 1054 YSKNLIYFADMRSGNLRTFDMSDS-TRIK--PIP-------LMNDTIRDNFVIDWVANNIYYIDSQM------HTINVAR 1117 (1332)
Q Consensus 1054 ~~~~~lY~sd~~~~~I~~~~l~~g-~~~~--~i~-------~~~~~~p~glAvDw~~~~LY~td~~~------~~I~v~~ 1117 (1332)
...++||+....+++|+.+++... ...+ .++ ..+...|.++..-+.+ ||++..+. +.|.++|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEE
Confidence 567899999999999999986421 1111 122 1244579999998655 99986655 6888888
Q ss_pred eCC-ceEEEEecC---CCCceEEEEcCCCcEEEEEecCC-------CC-C----CCCCcEEEEecCCCceEEEEecCC--
Q psy5806 1118 SDG-QHKKILVND---LMEPLAIAVYPRRGLLFYSHWGL-------YD-N----SPTTKIEKVYLDGSYRTVLVEEDL-- 1179 (1332)
Q Consensus 1118 ldG-~~~~~~~~~---~~~P~~iavdp~~g~Lywtd~~~-------~~-~----~~~~~I~r~~ldG~~~~~l~~~~l-- 1179 (1332)
.+. +....+..+ ...++.+.++|....||.++|+. +. . ....+|...+++.......+..+-
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 874 433333222 12356688899888999999861 00 0 014789999998643333333211
Q ss_pred CCcceEEE--ecCCCEEEEEEc-----CCCeEEEEecCCCce--EEEE--e------------------ecccceEEEec
Q psy5806 1180 AFPNELAI--DFKQRRLFWADS-----TNKRIEYCDFFGRSR--KIVI--S------------------KVAPYGLSVRQ 1230 (1332)
Q Consensus 1180 ~~p~glai--D~~~~~LY~~d~-----~~~~I~~~d~dG~~~--~~~~--~------------------~~~P~glav~~ 1230 (1332)
..|.+|.+ +++++.+|++.. -++.|..+.+++... ..++ . ...|.+|.+
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~l-- 328 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDI-- 328 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEE--
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEE--
Confidence 25777766 889999999998 888999888875321 1111 1 134778888
Q ss_pred CCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1231 SPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1231 ~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
+.++.+||+++|..+.|..++....
T Consensus 329 ---S~DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 329 ---SLDDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp ---CTTSCEEEEEETTTTEEEEEECSST
T ss_pred ---CCCCCEEEEEeCCCCEEEEEEecCC
Confidence 6678999999999999999997533
No 182
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.23 E-value=0.031 Score=69.31 Aligned_cols=190 Identities=9% Similarity=-0.085 Sum_probs=116.8
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEE-
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKK- 1124 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~- 1124 (1332)
.+..+++.+.+..+ .+. ..+.|...++.++.....+. ....+..+++. ++.|+.+....+.|.++++......
T Consensus 408 ~~~~~~~s~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~ 481 (615)
T 1pgu_A 408 QPKVASANNDGFTA-VLT-NDDDLLILQSFTGDIIKSVR--LNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSF 481 (615)
T ss_dssp CEEEEEECSSSEEE-EEE-TTSEEEEEETTTCCEEEEEE--CSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEE
T ss_pred CceEEEEcCCCCEE-EEe-CCCceEEEeccCCceeeecc--cCCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccc
Confidence 46788888876544 443 66778888875444333332 34568889988 7777666543678999999865442
Q ss_pred E-EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEec-CCCCcceEEEec----------CCC
Q psy5806 1125 I-LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEE-DLAFPNELAIDF----------KQR 1192 (1332)
Q Consensus 1125 ~-~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~-~l~~p~glaiD~----------~~~ 1192 (1332)
. +......+..++++|...+|...... +.|...++........+.. .-.....+++.+ +++
T Consensus 482 ~~~~~~~~~v~~~~~s~~g~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~ 554 (615)
T 1pgu_A 482 DLKTPLRAKPSYISISPSETYIAAGDVM-------GKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEED 554 (615)
T ss_dssp ECSSCCSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCC
T ss_pred cccCCccCceEEEEECCCCCEEEEcCCC-------CeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCC
Confidence 2 33334568899999966666555432 4677778755443332222 335577889988 666
Q ss_pred EEEEEEcCCCeEEEEecCCC-ceEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEec
Q psy5806 1193 RLFWADSTNKRIEYCDFFGR-SRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREK 1256 (1332)
Q Consensus 1193 ~LY~~d~~~~~I~~~d~dG~-~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~ 1256 (1332)
.|..+ ...+.|...+++.. ....... .....+|++ ..++. .++-...+.|...+..
T Consensus 555 ~l~~~-~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~------s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 555 LVATG-SLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLW------ETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp EEEEE-ETTSCEEEEESSCTTCCEEETTSSTTCEEEEEE------EETTE-EEEEETTSCEEEEEEC
T ss_pred EEEEE-cCCCcEEEEECCCCceechhhhcCccceEEEEE------cCCCC-eEEecCCceEEEEeee
Confidence 66655 46678999999754 2222222 445567777 12333 4444456666666543
No 183
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.21 E-value=0.00093 Score=85.94 Aligned_cols=360 Identities=11% Similarity=0.048 Sum_probs=195.4
Q ss_pred CccceeEecCCCeEEEEeCCCC-----eEEEEeCCCCceEEEEecCCC------------------------CCeEEEEe
Q psy5806 783 RTESIAVDAIGRKIYWTDMNAQ-----TIMVSDIDGKNAKVLFWLNLY------------------------RPRSIVVH 833 (1332)
Q Consensus 783 ~p~glAvD~~~~nLYwtD~~~~-----~I~v~~ldG~~~~~l~~~~~~------------------------~P~~Iavd 833 (1332)
.+..+++.+.++.|+.+....+ .|.+.++++.....++..... ...++++.
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 4667888888888888766333 788888866544444322111 14678999
Q ss_pred CCCCeEEEEecccCcCCCCceEEEecCCC---CcEEEecccccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEE
Q psy5806 834 YGLGLMVWADWSRTRLTNNRIEMAHMDGT---NRAVFETEVIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRA 910 (1332)
Q Consensus 834 p~~g~lywtd~g~~~~~~~~I~r~~~dG~---~~~~l~~~l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l 910 (1332)
|...+|+++.. .+|...++++. ....+...-..+..+++.+++ ++|+++.. +.|...++++.....+
T Consensus 118 pDg~~l~~~~~-------~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG-~~la~~~~--~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 118 PDAQRLLFPLG-------GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKG-GFVSFIRG--RNLWVIDLASGRQMQL 187 (741)
T ss_dssp TTSSEEEEEET-------TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTS-SEEEEEET--TEEEEEETTTTEEEEC
T ss_pred CCCCEEEEEeC-------CcEEEEECCCCCcceEEEcccCCcccccccCCCCC-CEEEEEeC--CcEEEEecCCCCEEEe
Confidence 98777777653 36888888876 444443333456688888988 88888764 4788888877554443
Q ss_pred eccCCc-----------------ceEEEEe--CCEEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCc
Q psy5806 911 YAVQSH-----------------PYTLTVL--DYYVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNA 971 (1332)
Q Consensus 911 ~~~~~~-----------------P~~la~~--~~~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~ 971 (1332)
...... +.++++. +.+|+++......+ . .+....... .+
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~-------------------~-~~~~~~~~p--~~ 245 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPV-------------------P-VQKRYEVYA--DR 245 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTS-------------------C-EEEEEEECS--SC
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCC-------------------c-eEecCCCCC--Cc
Confidence 221111 1222222 22333321111000 0 000000000 00
Q ss_pred ccCCCCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEEeecceEEEEeCCC-CCCCCcccccCCccceEEE
Q psy5806 972 CGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRISLDT-ADLLPVTLPFPEYMSSIFF 1050 (1332)
Q Consensus 972 C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~l~~-~~~~~~~~pi~~~~~~~~i 1050 (1332)
-. -..+ .....+. ..+ ... |+.++++. ........+-.....+..+
T Consensus 246 ~~-----~~~~----------------~~~~~g~---~~~--------~~~-l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 292 (741)
T 2ecf_A 246 TD-----VIEQ----------------RYPAAGD---ANV--------QVK-LGVISPAEQAQTQWIDLGKEQDIYLARV 292 (741)
T ss_dssp EE-----EEEE----------------ECCBTTS---CCC--------EEE-EEEECSSTTCCCEEECCCSCSSEEEEEE
T ss_pred cc-----ceEe----------------ecCCCCC---CCC--------eeE-EEEEECCCCCceEEecCCCCcceEEEEE
Confidence 00 0000 0000000 000 012 44444443 2211111110122346788
Q ss_pred EEeCCCcEEEEEeC----CCCeEEEEECCCCCCceeEeecCCC---CceeeEEEecCCeEEEEcCCCc--eEEEEeeCCc
Q psy5806 1051 DYHYSKNLIYFADM----RSGNLRTFDMSDSTRIKPIPLMNDT---IRDNFVIDWVANNIYYIDSQMH--TINVARSDGQ 1121 (1332)
Q Consensus 1051 d~d~~~~~lY~sd~----~~~~I~~~~l~~g~~~~~i~~~~~~---~p~glAvDw~~~~LY~td~~~~--~I~v~~ldG~ 1121 (1332)
+| +.+++|+++.. ....|+.+++.++....++...... ....+++.+.++ ++++....+ +|..++++|.
T Consensus 293 ~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~ 370 (741)
T 2ecf_A 293 NW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK 370 (741)
T ss_dssp EE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC
T ss_pred Ee-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC
Confidence 99 99999998754 2356888998755433332221111 335788887777 555544433 5666666677
Q ss_pred eEEEEecCCCCceEE-EEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcC
Q psy5806 1122 HKKILVNDLMEPLAI-AVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADST 1200 (1332)
Q Consensus 1122 ~~~~~~~~~~~P~~i-avdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~ 1200 (1332)
...+.........+ +++|...+||++.... +....+|++++++|...+.|.. ......+++++++++|.++-..
T Consensus 371 -~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~--~~~~~~l~~~~~~g~~~~~l~~--~~~~~~~~~spdg~~l~~~~~~ 445 (741)
T 2ecf_A 371 -AAALTHGNWSVDELLAVDEKAGLAYFRAGIE--SARESQIYAVPLQGGQPQRLSK--APGMHSASFARNASVYVDSWSN 445 (741)
T ss_dssp -EEESCCSSSCEEEEEEEETTTTEEEEEECSS--CTTCBEEEEEETTCCCCEECCC--SCSEEEEEECTTSSEEEEEEEE
T ss_pred -eeeeeecceEEEeEeEEeCCCCEEEEEEeCC--CCceEEEEEEEcCCCCeeeccc--CCCceEEEECCCCCEEEEEecC
Confidence 54454443445566 5999888898886543 1124579999998876655543 2334578899999988877544
Q ss_pred C---CeEEEEecCCCce
Q psy5806 1201 N---KRIEYCDFFGRSR 1214 (1332)
Q Consensus 1201 ~---~~I~~~d~dG~~~ 1214 (1332)
. ..+...+.+|...
T Consensus 446 ~~~p~~~~l~~~~~~~~ 462 (741)
T 2ecf_A 446 NSTPPQIELFRANGEKI 462 (741)
T ss_dssp TTEEEEEEEEETTSCEE
T ss_pred CCCCCeEEEEEcCCCeE
Confidence 2 3577777776543
No 184
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=98.21 E-value=7.9e-07 Score=108.58 Aligned_cols=79 Identities=20% Similarity=0.491 Sum_probs=59.0
Q ss_pred cccccCCCCCceecCCCCceEeCCcCcCCCCCCCCC-CCCCCCCCCC---CCCCCCCCCEEec-CCCEEEeeeecCCCCC
Q psy5806 9 WVGYLQEIPQYKKCNRTGACIPAQWQCDNEFDCEMG-EDEMKCPQAS---PPKKCSPDEHRCT-TGHCILKTWLCDGIPD 83 (1332)
Q Consensus 9 ~~~~~~c~~~~f~C~~~~~Ci~~~~~CDg~~DC~dg-sDE~~C~~~~---~~~~C~~~~f~C~-~g~Ci~~~~~CDg~~D 83 (1332)
.|. .|...++|.+ .|....++.|.. |.+. .|+..|.... .+..|. ++|+|. +|+||+..|+|||+.|
T Consensus 19 ~C~--~C~~~~~R~R----~v~~p~q~gG~~-C~~~l~d~~~C~~~~~c~~~~~c~-~~f~C~~~g~Ci~~~~~Cdg~~d 90 (554)
T 3ojy_A 19 DCF--PCQDKKYRHR----SLLQPNKFGGTI-CSGDIWDQASCSSSTTCVRQAQCG-QDFQCKETGRCLKRHLVCNGDQD 90 (554)
T ss_dssp CCC--TTTCEEEEEC----CEEECBCSSCCC-CCSCSEEEEECCCCCCC--CCCCS-SSEECSSSCCEECGGGTTSSSCC
T ss_pred CCC--CCCCccEeeE----eeccccccCCCC-CCCccccccCCCCCCCCcccCCCC-CcCccCCCCEEcccccccCCccc
Confidence 454 4766676665 677777777655 7764 6777784211 124564 799999 9999999999999999
Q ss_pred CCCCCCcccccc
Q psy5806 84 CSLGEDERNCNK 95 (1332)
Q Consensus 84 C~DgsDE~~C~~ 95 (1332)
|.|+|||.+|..
T Consensus 91 C~d~sDE~~C~~ 102 (554)
T 3ojy_A 91 CLDGSDEDDCED 102 (554)
T ss_dssp SSSCTTSSSCCS
T ss_pred CCCccccccCCC
Confidence 999999999864
No 185
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=98.15 E-value=7.4e-07 Score=71.88 Aligned_cols=38 Identities=34% Similarity=0.968 Sum_probs=35.4
Q ss_pred CcCCCCCCccccccCCCCCceeeCCCCccccCCCCcccc
Q psy5806 666 CNENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSE 704 (1332)
Q Consensus 666 C~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~ 704 (1332)
|..+||+|+|+|+..++ +|+|.|+.||+|..|+++|.+
T Consensus 1 C~~~ng~C~~~C~n~~g-s~~C~C~~Gy~L~~d~~tC~d 38 (51)
T 1kig_L 1 CSLDNGGCDQFCREERS-EVRCSCAHGYVLGDDSKSCVS 38 (51)
T ss_dssp CCTTTTSSSSCCCEETT-EECCCCCTTEEECTTSSCEEE
T ss_pred CCCCCCCcCCEeEcCCC-CeEEeCCCCcEECCCCCcccc
Confidence 66789999999999987 999999999999999999985
No 186
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.15 E-value=0.044 Score=67.97 Aligned_cols=541 Identities=9% Similarity=-0.028 Sum_probs=256.1
Q ss_pred ccceEEEEEEccCCeEEEEcCCCceEEEEEecCc----ceEEEEeCCCCC-CccEEEec--cCCeEEEEeCCCCeEEEEe
Q psy5806 466 VKSVVAIAWESANDSLYWADVENGEINRAHINGT----FQYNVIRHNTKK-PAGVAIDW--RTNKLYWTESEYNWIEVSN 538 (1332)
Q Consensus 466 ~~~~~~i~~d~~~~~lywsD~~~~~I~r~~~~g~----~~~~v~~~~~~~-p~glAvDw--~~~~lYw~d~~~~~I~v~~ 538 (1332)
...+.+++|++..+.|.... .+.|.-.++... .....+...... +..+++.. .++.|+ +-...+.|.+-+
T Consensus 18 ~~~v~~~~~spdg~~l~~~~--~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~-s~~~dg~v~vw~ 94 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAYPC--GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLC-SGDESGKVIVWG 94 (615)
T ss_dssp TTCCCCCEEETTTTEEEEEE--TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEE-EEETTSEEEEEE
T ss_pred cCceeEEEECCCCCEEEEec--CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEE-EecCCCEEEEEe
Confidence 34567899999888787775 567777777643 333444433445 67888887 555554 444567888888
Q ss_pred CC-C------CCc-EEEEeCCCCCceEEEEecCCCeEEEEecCCC--CceEEEcCCCCceEEEEeCCCCCceeeEEeccC
Q psy5806 539 LD-G------TYP-TLLFWQNLSEPRDIAVNPIGGIMYWCSWGDL--HKIEMAGMDGSHRHILASDSLKNPTGLAIDLEN 608 (1332)
Q Consensus 539 l~-g------~~~-~~l~~~~~~~P~~iavdp~~G~lywtd~g~~--~~I~r~~~dG~~~~~l~~~~l~~p~glaiD~~~ 608 (1332)
+. | ... ...+........++++.|...+|+-...... ..|.... .+.. ...+...-.....+++.+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~~-~~~~~~~~~~v~~~~~~~~~ 172 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD-SGNS-LGEVSGHSQRINACHLKQSR 172 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-TCCE-EEECCSCSSCEEEEEECSSS
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CCCc-ceeeecCCccEEEEEECCCC
Confidence 74 2 111 1112233456789999998777766553211 2343333 2222 22222333455677777766
Q ss_pred CeEEEEeCCCCeEEEEecCCCceEEEEeecceEEEeeecCceeEEEEeCCCCcCcCCCcCCCCCCccccccCCCCCceee
Q psy5806 609 SRLYWANVGLKTIEFTNLDGTRKQTLIALHHLKVMTKVVGLTDIDIFHRRRSKKTHPCNENNGGCSHLCLIAPKDGIRCV 688 (1332)
Q Consensus 609 ~rLYw~d~~~~~I~~~~~dG~~~~~~~~~~~l~v~~~~~~~~~i~v~~~~~q~~~~pC~~~nggCs~lCl~~~~~~~~C~ 688 (1332)
..++.+-...+.|...++.... .+. .+... .+ ....-.|.
T Consensus 173 ~~~l~~~~~d~~v~vwd~~~~~--~~~------------------~~~~~-----------~~---------~~~~v~~~ 212 (615)
T 1pgu_A 173 PMRSMTVGDDGSVVFYQGPPFK--FSA------------------SDRTH-----------HK---------QGSFVRDV 212 (615)
T ss_dssp SCEEEEEETTTEEEEEETTTBE--EEE------------------EECSS-----------SC---------TTCCEEEE
T ss_pred CcEEEEEeCCCcEEEEeCCCcc--eee------------------eeccc-----------CC---------CCceEEEE
Confidence 6344443444555554433211 110 00000 00 00000110
Q ss_pred CCCCccccCCCCccccCCccceEe-eccceeEEEecCCCCCcceeeec-----ccccceeEEeecCCCceEEEEecCCCc
Q psy5806 689 CPAGNLLREDRRTCSENPSKFLLV-SQTDKIRQISLDVEYRYPIVLPL-----RQLKMVASVDVDTKNEYIYWSDISEKT 762 (1332)
Q Consensus 689 Cp~g~~l~~d~~tC~~~~~~~ll~-s~~~~i~~i~l~~~~~~~~~~~~-----~~~~~~~~id~d~~~~~lYwsD~~~~~ 762 (1332)
.+.++ ...+|+. +....|+..++.... ....+ .....+.++++. ++..+++-...+.
T Consensus 213 -----~~~~~-------~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~ 275 (615)
T 1pgu_A 213 -----EFSPD-------SGEFVITVGSDRKISCFDGKSGE---FLKYIEDDQEPVQGGIFALSWL--DSQKFATVGADAT 275 (615)
T ss_dssp -----EECST-------TCCEEEEEETTCCEEEEETTTCC---EEEECCBTTBCCCSCEEEEEES--SSSEEEEEETTSE
T ss_pred -----EECCC-------CCCEEEEEeCCCeEEEEECCCCC---EeEEecccccccCCceEEEEEc--CCCEEEEEcCCCc
Confidence 11111 0122222 233455555554322 11222 223456778887 4555555555677
Q ss_pred eEEEecCCCCceEEEeCC----CCCccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEecCCCCCeEEEEeCCCCe
Q psy5806 763 IERVRFDMTGRERLVVND----LNRTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFWLNLYRPRSIVVHYGLGL 838 (1332)
Q Consensus 763 I~r~~~~g~~~~~vi~~~----~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~~~~~P~~Iavdp~~g~ 838 (1332)
|...++........+... -..+..+++. .++..++-...+.|.+.++........+........++++ |.
T Consensus 276 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~--- 349 (615)
T 1pgu_A 276 IRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT--GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP--- 349 (615)
T ss_dssp EEEEETTTTEEEEEEECCTTCGGGCEEEEEEE--ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---
T ss_pred EEEEECCCCcEEEEEcCCCCcccCceeEEEeC--CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---
Confidence 877776533322222221 1223334443 3334445455667888877642222222222244666777 55
Q ss_pred EEEEecccCcCCCCceEEEecCCCCcEEEecc-cccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEeccCCcc
Q psy5806 839 MVWADWSRTRLTNNRIEMAHMDGTNRAVFETE-VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYAVQSHP 917 (1332)
Q Consensus 839 lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~~-l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~~~~~P 917 (1332)
|+.... . ..|....+. .+... ......+++ ..+ +.|+.+ ...+.|...++.... ....|
T Consensus 350 l~~~~~--d----g~i~~w~~~-----~~~~~~~~~v~~~~~-~~~-~~l~~~-~~d~~i~~~~~~~~~------~~~~~ 409 (615)
T 1pgu_A 350 LISGSY--D----GRIMEWSSS-----SMHQDHSNLIVSLDN-SKA-QEYSSI-SWDDTLKVNGITKHE------FGSQP 409 (615)
T ss_dssp TEEEET--T----SCEEETTTT-----EEECCCCSCEEEEEC-CST-TCCEEE-ETTTEEEETTEEEEE------CSSCE
T ss_pred cEEECC--C----CeEEEEEch-----hhcCcccCceEEEEE-CCC-cEEEEE-eCCCCEEEEEcccCc------ccCCc
Confidence 332221 2 244444433 11111 223335555 223 334333 233444444432211 12255
Q ss_pred eEEEEeCC-EEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCC
Q psy5806 918 YTLTVLDY-YVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPT 996 (1332)
Q Consensus 918 ~~la~~~~-~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~ 996 (1332)
..+++..+ .+..+. ..+.+...+..+++.+.. +. .. .....+++.
T Consensus 410 ~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------~~----~~---------~~~~~~~~~----------- 455 (615)
T 1pgu_A 410 KVASANNDGFTAVLT-NDDDLLILQSFTGDIIKS---------VR----LN---------SPGSAVSLS----------- 455 (615)
T ss_dssp EEEEECSSSEEEEEE-TTSEEEEEETTTCCEEEE---------EE----CS---------SCEEEEEEC-----------
T ss_pred eEEEEcCCCCEEEEe-CCCceEEEeccCCceeee---------cc----cC---------CCceEEEEc-----------
Confidence 56665532 333222 444444433333321110 00 00 000001000
Q ss_pred CeeEccCCccccccCcceEEEEee--cceEEEEeCCCCCCCCcccccC-CccceEEEEEeCCCcEEEEEeCCCCeEEEEE
Q psy5806 997 GILLSADRRSCFSRTREFLLYTSR--FGVIRRISLDTADLLPVTLPFP-EYMSSIFFDYHYSKNLIYFADMRSGNLRTFD 1073 (1332)
Q Consensus 997 g~~l~~d~~tC~~~p~~~ll~~~~--~~~i~~i~l~~~~~~~~~~pi~-~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~ 1073 (1332)
..+|+.... .. |+..++....... ..+. ....+..++|++.++.|.... ..+.|+..+
T Consensus 456 ---------------~~~l~~~~~~d~~-i~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~g~~l~~~~-~dg~i~iw~ 516 (615)
T 1pgu_A 456 ---------------QNYVAVGLEEGNT-IQVFKLSDLEVSF--DLKTPLRAKPSYISISPSETYIAAGD-VMGKILLYD 516 (615)
T ss_dssp ---------------SSEEEEEETTTSC-EEEEETTEEEEEE--ECSSCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEE
T ss_pred ---------------CCEEEEeecCCCe-EEEEECCCccccc--cccCCccCceEEEEECCCCCEEEEcC-CCCeEEEee
Confidence 123333332 23 4444443221100 1111 223467999999988777665 678899999
Q ss_pred CCCCCCceeEeecCCCCceeeEEEe----------cCCeEEEEcCCCceEEEEeeCCc--eEEEEecCCCCceEEEEcCC
Q psy5806 1074 MSDSTRIKPIPLMNDTIRDNFVIDW----------VANNIYYIDSQMHTINVARSDGQ--HKKILVNDLMEPLAIAVYPR 1141 (1332)
Q Consensus 1074 l~~g~~~~~i~~~~~~~p~glAvDw----------~~~~LY~td~~~~~I~v~~ldG~--~~~~~~~~~~~P~~iavdp~ 1141 (1332)
+.++.....+.......+..+++.+ .++.|..+ ...+.|.+++++.. ....+..-.....+|++.|.
T Consensus 517 ~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~ 595 (615)
T 1pgu_A 517 LQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATG-SLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP 595 (615)
T ss_dssp TTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEE-ETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEET
T ss_pred CCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEE-cCCCcEEEEECCCCceechhhhcCccceEEEEEcCC
Confidence 8754333222211345678899987 56666544 45668999999853 33334333456889999995
Q ss_pred CcEEEEEe
Q psy5806 1142 RGLLFYSH 1149 (1332)
Q Consensus 1142 ~g~Lywtd 1149 (1332)
.. |..+.
T Consensus 596 ~~-l~s~~ 602 (615)
T 1pgu_A 596 ST-LVSSG 602 (615)
T ss_dssp TE-EEEEE
T ss_pred CC-eEEec
Confidence 54 54443
No 187
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.15 E-value=0.00021 Score=79.50 Aligned_cols=199 Identities=10% Similarity=0.048 Sum_probs=133.0
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCC-CCCceeEeec-CCCCceeeEEEecCCeEEEEcCC---CceEEEEeeCC
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSD-STRIKPIPLM-NDTIRDNFVIDWVANNIYYIDSQ---MHTINVARSDG 1120 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~-g~~~~~i~~~-~~~~p~glAvDw~~~~LY~td~~---~~~I~v~~ldG 1120 (1332)
.+.+++|++.++.|+++. .+.|+.+++.+ +. ...+... ....+..+++.+.++.|+++... ...|..+++++
T Consensus 43 ~v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~ 119 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS--EGLLYRLSLAGDPS-PEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTG 119 (297)
T ss_dssp CCEEEEECTTSSEEEEEE--TTEEEEEESSSCCS-CEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTC
T ss_pred ceEeeEECCCCCEEEEEc--CCeEEEEeCCCCCC-ceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCC
Confidence 467899999999888875 67899999874 33 2222211 12456789999989999888633 45677777766
Q ss_pred ceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEc-
Q psy5806 1121 QHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADS- 1199 (1332)
Q Consensus 1121 ~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~- 1199 (1332)
.....+... ..+..++++|...+|+++.... ..-+|+.+++++.....+.. .-..+..++++++++.|+++..
T Consensus 120 ~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~----~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~ 193 (297)
T 2ojh_A 120 GTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRD----QVFDIYSMDIDSGVETRLTH-GEGRNDGPDYSPDGRWIYFNSSR 193 (297)
T ss_dssp CCCEECCSS-SSEEEEEECTTSSEEEEEEEET----TEEEEEEEETTTCCEEECCC-SSSCEEEEEECTTSSEEEEEECT
T ss_pred CceEEeecC-CCccceEECCCCCEEEEEECCC----CceEEEEEECCCCcceEccc-CCCccccceECCCCCEEEEEecC
Confidence 554444332 4578899999888888775433 13478888887766554443 3356788999999998988754
Q ss_pred -CCCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECC----------CCEEEEEEecCC
Q psy5806 1200 -TNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWE----------AMSVVIAREKSD 1258 (1332)
Q Consensus 1200 -~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~----------~~~V~~~~~~~g 1258 (1332)
...+|+.++.++.....+.. ......+++ ++.+.+|+++... ...|+.++..++
T Consensus 194 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 259 (297)
T 2ojh_A 194 TGQMQIWRVRVDGSSVERITDSAYGDWFPHP-----SPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGG 259 (297)
T ss_dssp TSSCEEEEEETTSSCEEECCCCSEEEEEEEE-----CTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSC
T ss_pred CCCccEEEECCCCCCcEEEecCCcccCCeEE-----CCCCCEEEEEEcCCCCCcccccCceEEEEEecCCC
Confidence 34567777766655444433 334455666 3456677776643 256888887665
No 188
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.09 E-value=0.0034 Score=72.87 Aligned_cols=252 Identities=9% Similarity=0.046 Sum_probs=153.1
Q ss_pred CCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCC------CCc---EEEec-----ccccCceeEEeCCCCCeEEEE
Q psy5806 825 YRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDG------TNR---AVFET-----EVIWPSCLAIDYSDNPKLYWV 890 (1332)
Q Consensus 825 ~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG------~~~---~~l~~-----~l~~P~gl~iD~~~~~~lYw~ 890 (1332)
.-|.+|++|..+|++|++--.-..+...++-...++. .+. +..-+ .+..+.++.+|..+ ||++.
T Consensus 26 ~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~~v~iD~~~--rLWVL 103 (381)
T 3q6k_A 26 MISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIYQPVIDDCR--RLWVV 103 (381)
T ss_dssp CCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEEEEEECTTC--EEEEE
T ss_pred cceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEeeEEEEcCCC--cEEEE
Confidence 4699999985669999986321101123444444431 111 22211 16677899999855 99999
Q ss_pred eCCC---------------CeEEEEccCCC--ce-eEEe--c----cCCcceEEEEe---------CCEEEEEeCCCCEE
Q psy5806 891 DTSK---------------HTIEYKTLATG--RA-KRAY--A----VQSHPYTLTVL---------DYYVYWTDVQHSKI 937 (1332)
Q Consensus 891 d~~~---------------~~I~~~~~dG~--~~-~~l~--~----~~~~P~~la~~---------~~~iywtD~~~~~i 937 (1332)
|.+. -+|..+|+... .. +.+. . +.+....|+++ ++++|.+|.....|
T Consensus 104 DtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gL 183 (381)
T 3q6k_A 104 DIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGAL 183 (381)
T ss_dssp ECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEE
T ss_pred eCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcE
Confidence 9763 15777888665 22 1211 1 22334567777 57899999888888
Q ss_pred EEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEE
Q psy5806 938 YRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLY 1017 (1332)
Q Consensus 938 ~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~ 1017 (1332)
..++..+++..| +.+.+ . .|+.+..|
T Consensus 184 IVydl~~~~swR---------v~~~~--~-------------------------------------------~pd~~~~~ 209 (381)
T 3q6k_A 184 FIYDHKKQDSWN---------VTHPT--F-------------------------------------------KAERPTKF 209 (381)
T ss_dssp EEEETTTTEEEE---------EECGG--G-------------------------------------------SCCSCEEE
T ss_pred EEEECCCCcEEE---------EccCC--C-------------------------------------------ccccCcce
Confidence 887777664333 11110 0 01111111
Q ss_pred EeecceEEEEeCCCCCCCCcccccCCccceEEEEEeCC----CcEEEEEeCCCCeEEEEE---CCCCCC---ceeEeecC
Q psy5806 1018 TSRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYS----KNLIYFADMRSGNLRTFD---MSDSTR---IKPIPLMN 1087 (1332)
Q Consensus 1018 ~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~----~~~lY~sd~~~~~I~~~~---l~~g~~---~~~i~~~~ 1087 (1332)
.-.+. -. . + ...+.+|+.++. ++.|||.-..+.+++++. |.+.+. .+.+...+
T Consensus 210 ~i~G~-~~--~----------~----~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg 272 (381)
T 3q6k_A 210 DYGGK-EY--E----------F----KAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRG 272 (381)
T ss_dssp EETTE-EE--E----------E----CCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECC
T ss_pred EECCE-Ee--E----------e----ccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecC
Confidence 11111 00 0 0 113567777776 789999998888999997 443322 22232222
Q ss_pred -CCCceeeEEEecCCeEEEEcCCCceEEEEeeCC-c----eEEEEe--cCCCCceEEEEcCCCcEEEEEec
Q psy5806 1088 -DTIRDNFVIDWVANNIYYIDSQMHTINVARSDG-Q----HKKILV--NDLMEPLAIAVYPRRGLLFYSHW 1150 (1332)
Q Consensus 1088 -~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG-~----~~~~~~--~~~~~P~~iavdp~~g~Lywtd~ 1150 (1332)
.....++|+|..+++||+++.+.+.|..++.++ . ...++. ..+..|.+|++++ +|+||++..
T Consensus 273 ~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~-~g~Lwv~sn 342 (381)
T 3q6k_A 273 KYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDS-KGGLWFMSN 342 (381)
T ss_dssp TTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECT-TSCEEEEEC
T ss_pred CCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECC-CCeEEEEEC
Confidence 133457899877999999999999999999988 3 234432 3566799999997 789999863
No 189
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.07 E-value=0.00048 Score=78.56 Aligned_cols=178 Identities=15% Similarity=0.115 Sum_probs=113.9
Q ss_pred CCCeEEEEECCCCCCceeEeecCCCCceeeEEEec----CC---eEEEEcCC--CceEEEEeeCCce--EEEE-------
Q psy5806 1065 RSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWV----AN---NIYYIDSQ--MHTINVARSDGQH--KKIL------- 1126 (1332)
Q Consensus 1065 ~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~----~~---~LY~td~~--~~~I~v~~ldG~~--~~~~------- 1126 (1332)
..+-|+.++|+ |...+.+ ..+.++++.+-.. ++ .+|+++.. .++|.++++|... ...+
T Consensus 48 k~~gL~Vydl~-G~~l~~~---~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv 123 (355)
T 3amr_A 48 KKSGLVVYSLD-GKMLHSY---NTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPI 123 (355)
T ss_dssp TTTEEEEEETT-SCEEEEE---CCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCE
T ss_pred CCCCEEEEcCC-CcEEEEc---cCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCc
Confidence 44567777764 4433332 2245666555431 11 46899998 8999999887322 2223
Q ss_pred ecCCCCceEEEE--cCCCc--EEEEEecCCCCCCCCCcEEEEec----CCCceEEEEec--CCCCcceEEEecCCCEEEE
Q psy5806 1127 VNDLMEPLAIAV--YPRRG--LLFYSHWGLYDNSPTTKIEKVYL----DGSYRTVLVEE--DLAFPNELAIDFKQRRLFW 1196 (1332)
Q Consensus 1127 ~~~~~~P~~iav--dp~~g--~Lywtd~~~~~~~~~~~I~r~~l----dG~~~~~l~~~--~l~~p~glaiD~~~~~LY~ 1196 (1332)
.+++..|+||++ +|..| ++|+++.. +++....+ +|.....++.+ --..|.|+++|.+.++||+
T Consensus 124 ~t~~~~pyGlcly~~~~~g~~yafV~~k~-------G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv 196 (355)
T 3amr_A 124 ATAINEVYGFTLYHSQKTGKYYAMVTGKE-------GEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYI 196 (355)
T ss_dssp ECCCSSCCCEEEEECTTTCCEEEEEECSS-------SEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEE
T ss_pred CCCCCCeeEEEEEecCCCCcEEEEEECCC-------CeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEE
Confidence 144578999999 88777 46666643 45666444 22222222221 1257999999999999999
Q ss_pred EEcCCCeEEEEecC--CC-ceEEEEe------ecccceEEEecCCccccccEEEEEECCCCEEEEEEec
Q psy5806 1197 ADSTNKRIEYCDFF--GR-SRKIVIS------KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREK 1256 (1332)
Q Consensus 1197 ~d~~~~~I~~~d~d--G~-~~~~~~~------~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~ 1256 (1332)
++...+ |++++.+ +. .++.+.. ...|.||++. +..+-.++|++++..+++...++..
T Consensus 197 ~eEd~G-Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~--~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 197 AEEDEA-IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIY--YAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EETTTE-EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEE--ECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred ecccce-EEEEeCCcCCCCCceEEEEecCCccccCcceEEEE--ecCCCCEEEEEEcCCCCEEEEEECC
Confidence 998865 9999965 32 3444432 2489999991 0111126999999999999999875
No 190
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.07 E-value=0.00027 Score=78.54 Aligned_cols=219 Identities=10% Similarity=-0.007 Sum_probs=138.0
Q ss_pred ceEEEEeecceEEEEeCCC-CCCCCcccccCCccceEEEEEeCCCcEEEEEeCC---CCeEEEEECCCCCCceeEeecCC
Q psy5806 1013 EFLLYTSRFGVIRRISLDT-ADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMR---SGNLRTFDMSDSTRIKPIPLMND 1088 (1332)
Q Consensus 1013 ~~ll~~~~~~~i~~i~l~~-~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~---~~~I~~~~l~~g~~~~~i~~~~~ 1088 (1332)
.+|++..... |+.++++. .... .+........+..++|++.++.|+++... ...|+.+++.++ ....+. ..
T Consensus 54 ~~l~~~~~~~-i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~-~~~~~~--~~ 128 (297)
T 2ojh_A 54 KYLLLNSEGL-LYRLSLAGDPSPE-KVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGG-TPRLMT--KN 128 (297)
T ss_dssp SEEEEEETTE-EEEEESSSCCSCE-ECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCC-CCEECC--SS
T ss_pred CEEEEEcCCe-EEEEeCCCCCCce-EeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCC-ceEEee--cC
Confidence 3555555556 77777765 3221 11111112345678899999999988743 467888887633 222222 23
Q ss_pred CCceeeEEEecCCeEEEEcCCCceEEEEe--eCCceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEec
Q psy5806 1089 TIRDNFVIDWVANNIYYIDSQMHTINVAR--SDGQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYL 1166 (1332)
Q Consensus 1089 ~~p~glAvDw~~~~LY~td~~~~~I~v~~--ldG~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~l 1166 (1332)
..+..+++.+.++.|+++....+.+.++. +++.....+......+..++++|...+|+++.... ...+|+.+++
T Consensus 129 ~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~~i~~~~~ 204 (297)
T 2ojh_A 129 LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRT----GQMQIWRVRV 204 (297)
T ss_dssp SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTT----SSCEEEEEET
T ss_pred CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCC----CCccEEEECC
Confidence 34677888888888987765556566555 44444444444445789999999777788875322 2468999988
Q ss_pred CCCceEEEEecCCCCcceEEEecCCCEEEEEEcC----------CCeEEEEecCCCceEEEEe----ecccceEEEecCC
Q psy5806 1167 DGSYRTVLVEEDLAFPNELAIDFKQRRLFWADST----------NKRIEYCDFFGRSRKIVIS----KVAPYGLSVRQSP 1232 (1332)
Q Consensus 1167 dG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~----------~~~I~~~d~dG~~~~~~~~----~~~P~glav~~~~ 1232 (1332)
++.....+.. .......++++++++.|+++... ...|...|+++...+.+.. ...+..+++
T Consensus 205 ~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~---- 279 (297)
T 2ojh_A 205 DGSSVERITD-SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNW---- 279 (297)
T ss_dssp TSSCEEECCC-CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCB----
T ss_pred CCCCcEEEec-CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceE----
Confidence 8876655443 22345568899999998887653 2569999998766544443 234555666
Q ss_pred ccccccEEEEEECC
Q psy5806 1233 GKAFIVELYWTDWE 1246 (1332)
Q Consensus 1233 ~~~~~~~lYwtd~~ 1246 (1332)
.+.+.+|+++...
T Consensus 280 -spdg~~l~~~~~~ 292 (297)
T 2ojh_A 280 -SPDGDEFAYVRYF 292 (297)
T ss_dssp -CTTSSEEEEEEEC
T ss_pred -CCCCCEEEEEEec
Confidence 3456667766543
No 191
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.01 E-value=0.00057 Score=77.95 Aligned_cols=147 Identities=12% Similarity=0.105 Sum_probs=100.1
Q ss_pred EEEEEeCC--CCeEEEEECCCCCC-ceeE------eecCCCCceeeEE--EecCCe--EEEEcCCCceEEEEee----CC
Q psy5806 1058 LIYFADMR--SGNLRTFDMSDSTR-IKPI------PLMNDTIRDNFVI--DWVANN--IYYIDSQMHTINVARS----DG 1120 (1332)
Q Consensus 1058 ~lY~sd~~--~~~I~~~~l~~g~~-~~~i------~~~~~~~p~glAv--Dw~~~~--LY~td~~~~~I~v~~l----dG 1120 (1332)
.+|.++.. .++|..+.++..+. ...+ +.+.+..|.||++ +..++. +|+++.+ ++++.+++ +|
T Consensus 88 la~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g 166 (355)
T 3amr_A 88 IAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNG 166 (355)
T ss_dssp EEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTS
T ss_pred EEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCC
Confidence 57889987 88887776642121 2222 1134478999999 876664 7777776 68877666 23
Q ss_pred ce--EEE--EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCc---eEEEEe---cCCC-CcceEEEec
Q psy5806 1121 QH--KKI--LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSY---RTVLVE---EDLA-FPNELAIDF 1189 (1332)
Q Consensus 1121 ~~--~~~--~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~---~~~l~~---~~l~-~p~glaiD~ 1189 (1332)
.. +.+ +.-+ ..|.++++|+..|+||++++.. -|+|++.+... .+.+.. ..+. .|.||+|.+
T Consensus 167 ~~~~~lVR~f~lg-sq~EgcvvDd~~g~Lyv~eEd~-------GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~ 238 (355)
T 3amr_A 167 YISGKKVRAFKMN-SQTEGMAADDEYGRLYIAEEDE-------AIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYY 238 (355)
T ss_dssp CEEEEEEEEEECS-SCEEEEEEETTTTEEEEEETTT-------EEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEE
T ss_pred cccceEEEEecCC-CCcceEEEcCCCCeEEEecccc-------eEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEe
Confidence 22 111 3223 5899999999999999999865 39999965332 233321 2233 799999975
Q ss_pred C--C-CEEEEEEcCCCeEEEEecCCCc
Q psy5806 1190 K--Q-RRLFWADSTNKRIEYCDFFGRS 1213 (1332)
Q Consensus 1190 ~--~-~~LY~~d~~~~~I~~~d~dG~~ 1213 (1332)
. + +.|+.++.++++...+|..+.+
T Consensus 239 ~~~g~gyLivSsQG~~s~~Vydr~~~~ 265 (355)
T 3amr_A 239 AADGKGYLMASSQGNSSYAIYDRQGKN 265 (355)
T ss_dssp CGGGCEEEEEEEGGGTEEEEEESSTTC
T ss_pred cCCCCEEEEEEcCCCCEEEEEECCCCC
Confidence 3 3 4799999999999999997654
No 192
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.98 E-value=0.0041 Score=79.45 Aligned_cols=164 Identities=8% Similarity=0.076 Sum_probs=105.3
Q ss_pred ceEEEEEeCCCcEEEEEeCCC----CeEEEEECCCCCCceeEeecCC----CCceeeEEEe--cCCeEEEEcCC-CceEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRS----GNLRTFDMSDSTRIKPIPLMND----TIRDNFVIDW--VANNIYYIDSQ-MHTIN 1114 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~----~~I~~~~l~~g~~~~~i~~~~~----~~p~glAvDw--~~~~LY~td~~-~~~I~ 1114 (1332)
.+..++|++.+++|+++.... ..|+.+++.+|.....+..... .....+++.+ .++.||.++.. ..+|.
T Consensus 259 ~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~ 338 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLY 338 (706)
T ss_dssp EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEE
T ss_pred eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEE
Confidence 467899999999999865433 3788899875523333332111 1235678876 66666655443 23455
Q ss_pred EEeeCCceEEEEecCCCCceE-EEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCE
Q psy5806 1115 VARSDGQHKKILVNDLMEPLA-IAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRR 1193 (1332)
Q Consensus 1115 v~~ldG~~~~~~~~~~~~P~~-iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~ 1193 (1332)
.++++|.....+..+...... ++++|....||++.... +.....|++.++++...+.+.. ......++++++++.
T Consensus 339 ~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~--~~~~~~l~~~d~~~~~~~~l~~--~~~~~~~~~spdg~~ 414 (706)
T 2z3z_A 339 LYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEA--SPLERHFYCIDIKGGKTKDLTP--ESGMHRTQLSPDGSA 414 (706)
T ss_dssp EEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSS--CTTCBEEEEEETTCCCCEESCC--SSSEEEEEECTTSSE
T ss_pred EEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCC--CCceEEEEEEEcCCCCceeccC--CCceEEEEECCCCCE
Confidence 555566655555444333444 79999888999987554 1123589999998766544432 234567899999988
Q ss_pred EEEEEcCC---CeEEEEecCCCc
Q psy5806 1194 LFWADSTN---KRIEYCDFFGRS 1213 (1332)
Q Consensus 1194 LY~~d~~~---~~I~~~d~dG~~ 1213 (1332)
|.++-... ..|...|.++..
T Consensus 415 l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 415 IIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEEEECSSCSCEEEEEESSSCE
T ss_pred EEEEecCCCCCcEEEEEECCCCe
Confidence 87764432 569999988765
No 193
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.96 E-value=0.0088 Score=76.74 Aligned_cols=361 Identities=12% Similarity=0.083 Sum_probs=197.4
Q ss_pred ceEEEEEEccCCeEEEEcCCCc-----eEEEEEecCcceEEEEeCCCC------------------------CCccEEEe
Q psy5806 468 SVVAIAWESANDSLYWADVENG-----EINRAHINGTFQYNVIRHNTK------------------------KPAGVAID 518 (1332)
Q Consensus 468 ~~~~i~~d~~~~~lywsD~~~~-----~I~r~~~~g~~~~~v~~~~~~------------------------~p~glAvD 518 (1332)
.+..++|.+..++|+++...++ .|+..++++.....++..... .+..+++.
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 4668889888888888765344 788888876655555543221 25788999
Q ss_pred ccCCeEEEEeCCCCeEEEEeCCCC---CcEEEEeCCCCCceEEEEecCCCeEEEEecCCCCceEEEcCCCCceEEEEeCC
Q psy5806 519 WRTNKLYWTESEYNWIEVSNLDGT---YPTLLFWQNLSEPRDIAVNPIGGIMYWCSWGDLHKIEMAGMDGSHRHILASDS 595 (1332)
Q Consensus 519 w~~~~lYw~d~~~~~I~v~~l~g~---~~~~l~~~~~~~P~~iavdp~~G~lywtd~g~~~~I~r~~~dG~~~~~l~~~~ 595 (1332)
+.++.|+++.. +.|.+.++++. ..+.+. .....+..+++.|...+|.++.. ..|...++++.....+....
T Consensus 118 pDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~-~~~~~~~~~~~SPDG~~la~~~~---~~i~~~d~~~g~~~~~~~~~ 191 (741)
T 2ecf_A 118 PDAQRLLFPLG--GELYLYDLKQEGKAAVRQLT-HGEGFATDAKLSPKGGFVSFIRG---RNLWVIDLASGRQMQLTADG 191 (741)
T ss_dssp TTSSEEEEEET--TEEEEEESSSCSTTSCCBCC-CSSSCEEEEEECTTSSEEEEEET---TEEEEEETTTTEEEECCCCC
T ss_pred CCCCEEEEEeC--CcEEEEECCCCCcceEEEcc-cCCcccccccCCCCCCEEEEEeC---CcEEEEecCCCCEEEeccCC
Confidence 98999998875 88999999876 443333 23356789999999887888763 36888888776544443322
Q ss_pred CC----------------CceeeEEeccCCeEEEEeCCCCeEEEEecCCCceEEEEeecceEEEeeecCceeEEEEeCCC
Q psy5806 596 LK----------------NPTGLAIDLENSRLYWANVGLKTIEFTNLDGTRKQTLIALHHLKVMTKVVGLTDIDIFHRRR 659 (1332)
Q Consensus 596 l~----------------~p~glaiD~~~~rLYw~d~~~~~I~~~~~dG~~~~~~~~~~~l~v~~~~~~~~~i~v~~~~~ 659 (1332)
.. .+.++++.+.+++|+++......+..... ... .+. ......+..
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~-----~~~--~p~--------~~~~~~~~~--- 253 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKR-----YEV--YAD--------RTDVIEQRY--- 253 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEE-----EEE--CSS--------CEEEEEEEC---
T ss_pred ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEec-----CCC--CCC--------cccceEeec---
Confidence 11 14678888888888876432111100000 000 000 000000000
Q ss_pred CcCcCCCcCCCCCCccccccCCCCCceeeCCCCccccCCCCccccCCccceEeeccceeEEEecCC-CCCcceeeec--c
Q psy5806 660 SKKTHPCNENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSENPSKFLLVSQTDKIRQISLDV-EYRYPIVLPL--R 736 (1332)
Q Consensus 660 q~~~~pC~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~ll~s~~~~i~~i~l~~-~~~~~~~~~~--~ 736 (1332)
+.+ +. ..+ ...|+.+++++ ... ..+.. .
T Consensus 254 -------------------~~~-----------------g~---~~~--------~~~l~~~d~~~~~~~--~~~~~~~~ 284 (741)
T 2ecf_A 254 -------------------PAA-----------------GD---ANV--------QVKLGVISPAEQAQT--QWIDLGKE 284 (741)
T ss_dssp -------------------CBT-----------------TS---CCC--------EEEEEEECSSTTCCC--EEECCCSC
T ss_pred -------------------CCC-----------------CC---CCC--------eeEEEEEECCCCCce--EEecCCCC
Confidence 000 00 000 01122222222 110 00100 0
Q ss_pred cccceeEEeecCCCceEEEEec----CCCceEEEecCCCCceEEEeCCCC----CccceeEecCCCeEEEEeCCC--CeE
Q psy5806 737 QLKMVASVDVDTKNEYIYWSDI----SEKTIERVRFDMTGRERLVVNDLN----RTESIAVDAIGRKIYWTDMNA--QTI 806 (1332)
Q Consensus 737 ~~~~~~~id~d~~~~~lYwsD~----~~~~I~r~~~~g~~~~~vi~~~~~----~p~glAvD~~~~nLYwtD~~~--~~I 806 (1332)
....+..+++ +.+..|+++.. ....|+..++.+.....++..... ....+++...++ ++++.... .+|
T Consensus 285 ~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l 362 (741)
T 2ecf_A 285 QDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHL 362 (741)
T ss_dssp SSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEE
T ss_pred cceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEE
Confidence 1223456677 77777776543 245677777765554444432211 345788888777 66664433 467
Q ss_pred EEEeCCCCceEEEEecCCCCCeEE-EEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEecccccCceeEEeCCCCC
Q psy5806 807 MVSDIDGKNAKVLFWLNLYRPRSI-VVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFETEVIWPSCLAIDYSDNP 885 (1332)
Q Consensus 807 ~v~~ldG~~~~~l~~~~~~~P~~I-avdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~~l~~P~gl~iD~~~~~ 885 (1332)
...+++|. .+.+.. .......+ +++|...+||++..... ....+|++..++|...+.|.. ......+++..++ +
T Consensus 363 ~~~~~~~~-~~~l~~-~~~~v~~~~~~s~dg~~l~~~~~~~~-~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg-~ 437 (741)
T 2ecf_A 363 YRIDSKGK-AAALTH-GNWSVDELLAVDEKAGLAYFRAGIES-ARESQIYAVPLQGGQPQRLSK-APGMHSASFARNA-S 437 (741)
T ss_dssp EEECSSSC-EEESCC-SSSCEEEEEEEETTTTEEEEEECSSC-TTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTS-S
T ss_pred EEEcCCCC-eeeeee-cceEEEeEeEEeCCCCEEEEEEeCCC-CceEEEEEEEcCCCCeeeccc-CCCceEEEECCCC-C
Confidence 77777777 444332 22334566 58998778877654321 001368888888876665543 2222466777777 6
Q ss_pred eEEEEeCCC---CeEEEEccCCCcee
Q psy5806 886 KLYWVDTSK---HTIEYKTLATGRAK 908 (1332)
Q Consensus 886 ~lYw~d~~~---~~I~~~~~dG~~~~ 908 (1332)
+|.+.-... ..++..+.+|...+
T Consensus 438 ~l~~~~~~~~~p~~~~l~~~~~~~~~ 463 (741)
T 2ecf_A 438 VYVDSWSNNSTPPQIELFRANGEKIA 463 (741)
T ss_dssp EEEEEEEETTEEEEEEEEETTSCEEE
T ss_pred EEEEEecCCCCCCeEEEEEcCCCeEE
Confidence 666553322 34566666665433
No 194
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.90 E-value=0.017 Score=65.25 Aligned_cols=228 Identities=7% Similarity=-0.109 Sum_probs=146.2
Q ss_pred ceEEEEeecceEEEEeCCCCCCCCccccc---CCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCcee-EeecCC
Q psy5806 1013 EFLLYTSRFGVIRRISLDTADLLPVTLPF---PEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKP-IPLMND 1088 (1332)
Q Consensus 1013 ~~ll~~~~~~~i~~i~l~~~~~~~~~~pi---~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~-i~~~~~ 1088 (1332)
.+|+...... |+..++...........+ .....+..++|++.++.|+... ..+.|...++.++..... ......
T Consensus 64 ~~l~~~~dg~-i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~ 141 (337)
T 1gxr_A 64 RHVYTGGKGC-VKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG-EASTLSIWDLAAPTPRIKAELTSSA 141 (337)
T ss_dssp SEEEEECBSE-EEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE-SSSEEEEEECCCC--EEEEEEECSS
T ss_pred cEEEEcCCCe-EEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc-CCCcEEEEECCCCCcceeeecccCC
Confidence 4555555444 776777654332222211 2234567999999888777765 678899999875442222 222334
Q ss_pred CCceeeEEEecCCeEEEEcCCCceEEEEeeCCce-EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecC
Q psy5806 1089 TIRDNFVIDWVANNIYYIDSQMHTINVARSDGQH-KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLD 1167 (1332)
Q Consensus 1089 ~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~-~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ld 1167 (1332)
..+..+++.+.++.|+.+. ..+.|.++++.... ...+......+..++++|...+|+.+... +.|...++.
T Consensus 142 ~~i~~~~~~~~~~~l~~~~-~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------g~i~~~d~~ 213 (337)
T 1gxr_A 142 PACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD-------NTVRSWDLR 213 (337)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT-------SEEEEEETT
T ss_pred CceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecC-------CcEEEEECC
Confidence 4567899987677776654 45689999997543 33354444578999999966566655432 568888887
Q ss_pred CCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECC
Q psy5806 1168 GSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWE 1246 (1332)
Q Consensus 1168 G~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~ 1246 (1332)
......... .-..+..+++.++++.|+.+. ..+.|...++.......+.. ...+.++++ .+.+.+| ++-..
T Consensus 214 ~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~-~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~l-~~~~~ 285 (337)
T 1gxr_A 214 EGRQLQQHD-FTSQIFSLGYCPTGEWLAVGM-ESSNVEVLHVNKPDKYQLHLHESCVLSLKF-----AYCGKWF-VSTGK 285 (337)
T ss_dssp TTEEEEEEE-CSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTSSCEEEECCCSSCEEEEEE-----CTTSSEE-EEEET
T ss_pred CCceEeeec-CCCceEEEEECCCCCEEEEEc-CCCcEEEEECCCCCeEEEcCCccceeEEEE-----CCCCCEE-EEecC
Confidence 655444443 235577899998888888765 56789999998765544433 566778888 2234444 45456
Q ss_pred CCEEEEEEecCC
Q psy5806 1247 AMSVVIAREKSD 1258 (1332)
Q Consensus 1247 ~~~V~~~~~~~g 1258 (1332)
.+.|...+..++
T Consensus 286 dg~i~~~~~~~~ 297 (337)
T 1gxr_A 286 DNLLNAWRTPYG 297 (337)
T ss_dssp TSEEEEEETTTC
T ss_pred CCcEEEEECCCC
Confidence 789999998777
No 195
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.85 E-value=0.0015 Score=77.92 Aligned_cols=180 Identities=7% Similarity=-0.061 Sum_probs=124.2
Q ss_pred CeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCC--ceEEEEeeCCceEEEEecCCCCceEEEEcCCCcE
Q psy5806 1067 GNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQM--HTINVARSDGQHKKILVNDLMEPLAIAVYPRRGL 1144 (1332)
Q Consensus 1067 ~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~--~~I~v~~ldG~~~~~~~~~~~~P~~iavdp~~g~ 1144 (1332)
+.|+..+++ +.....+. .....+..+++.+.++.|+++.... ..|.++++.+.....+........+++++|...+
T Consensus 159 ~~i~i~d~~-g~~~~~l~-~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~ 236 (415)
T 2hqs_A 159 YELRVSDYD-GYNQFVVH-RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSK 236 (415)
T ss_dssp EEEEEEETT-SCSCEEEE-EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSE
T ss_pred ceEEEEcCC-CCCCEEEe-CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCE
Confidence 567777776 44444443 2344678899999899998876543 5899999975444444444456789999997777
Q ss_pred EEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCC--CeEEEEecCCCceEEEEe-ec
Q psy5806 1145 LFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTN--KRIEYCDFFGRSRKIVIS-KV 1221 (1332)
Q Consensus 1145 Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~--~~I~~~d~dG~~~~~~~~-~~ 1221 (1332)
|+++.... ....|+..++.+.....+.. .-.....+++.++++.|+++.... .+|+..|+++...+.+.. ..
T Consensus 237 la~~~~~~----g~~~i~~~d~~~~~~~~l~~-~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~ 311 (415)
T 2hqs_A 237 LAFALSKT----GSLNLYVMDLASGQIRQVTD-GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGS 311 (415)
T ss_dssp EEEEECTT----SSCEEEEEETTTCCEEECCC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSS
T ss_pred EEEEEecC----CCceEEEEECCCCCEEeCcC-CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCC
Confidence 88776432 23579999998766544433 234567889999999898876433 379999998765444433 44
Q ss_pred ccceEEEecCCccccccEEEEEECC--CCEEEEEEecCC
Q psy5806 1222 APYGLSVRQSPGKAFIVELYWTDWE--AMSVVIAREKSD 1258 (1332)
Q Consensus 1222 ~P~glav~~~~~~~~~~~lYwtd~~--~~~V~~~~~~~g 1258 (1332)
...++++ ++++.+|+++... ...|+.++..++
T Consensus 312 ~~~~~~~-----spdG~~l~~~~~~~g~~~i~~~d~~~~ 345 (415)
T 2hqs_A 312 QNQDADV-----SSDGKFMVMVSSNGGQQHIAKQDLATG 345 (415)
T ss_dssp EEEEEEE-----CTTSSEEEEEEECSSCEEEEEEETTTC
T ss_pred cccCeEE-----CCCCCEEEEEECcCCceEEEEEECCCC
Confidence 5556777 4567788888764 458888998776
No 196
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.84 E-value=0.048 Score=63.70 Aligned_cols=332 Identities=8% Similarity=-0.081 Sum_probs=177.9
Q ss_pred CCCeEEEEeCCCC-eEEEEecccCcCCCCceEEEec----C-CC------CcEEEecc----------cccCceeEEeCC
Q psy5806 825 YRPRSIVVHYGLG-LMVWADWSRTRLTNNRIEMAHM----D-GT------NRAVFETE----------VIWPSCLAIDYS 882 (1332)
Q Consensus 825 ~~P~~Iavdp~~g-~lywtd~g~~~~~~~~I~r~~~----d-G~------~~~~l~~~----------l~~P~gl~iD~~ 882 (1332)
....+++++|... +|+.... . ..|....+ . |. ....+... -.....+++...
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~--d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 119 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEK--N----SVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHD 119 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEET--B----TEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTT
T ss_pred CceEEEEECCCCCcEEEEecC--C----ceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCC
Confidence 4578899999855 5555442 2 35665555 3 33 12222221 114557888887
Q ss_pred CCCeEEEEeCCCCeEEEEccCCCceeEEeccCCcceEEEEe--CCEEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEE
Q psy5806 883 DNPKLYWVDTSKHTIEYKTLATGRAKRAYAVQSHPYTLTVL--DYYVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLV 960 (1332)
Q Consensus 883 ~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~~~~~P~~la~~--~~~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~ 960 (1332)
+ +.|+.+. ..+.|...+.+|.....+........++++. +.+|+.. ...+.|...+..++..+..... .
T Consensus 120 ~-~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~---~--- 190 (425)
T 1r5m_A 120 G-NSIVTGV-ENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISM-DVENVTILWNVISGTVMQHFEL---K--- 190 (425)
T ss_dssp S-SEEEEEE-TTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEE-ETTCCEEEEETTTTEEEEEECC---C---
T ss_pred C-CEEEEEe-CCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEE-ecCCeEEEEECCCCcEEEEeec---c---
Confidence 7 6665554 4567777777776655554333445667765 3344443 3456666666655533321000 0
Q ss_pred eccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEEe-ecceEEEEeCCCCCCCCccc
Q psy5806 961 RAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTS-RFGVIRRISLDTADLLPVTL 1039 (1332)
Q Consensus 961 ~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~-~~~~i~~i~l~~~~~~~~~~ 1039 (1332)
..+....+.... .+.+... ..... .|...++... ... |+..++.........
T Consensus 191 --~~~~~~~~~~~~-----------~~~~~~~---~~~~~---------~~~~~~~~~~~~g~-i~~~d~~~~~~~~~~- 243 (425)
T 1r5m_A 191 --ETGGSSINAENH-----------SGDGSLG---VDVEW---------VDDDKFVIPGPKGA-IFVYQITEKTPTGKL- 243 (425)
T ss_dssp ----------------------------CCCB---SCCEE---------EETTEEEEECGGGC-EEEEETTCSSCSEEE-
T ss_pred --ccCccceeeccc-----------cCCccee---eEEEE---------cCCCEEEEEcCCCe-EEEEEcCCCceeeee-
Confidence 000000000000 0000000 00000 1223333333 344 777776543221111
Q ss_pred ccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC
Q psy5806 1040 PFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD 1119 (1332)
Q Consensus 1040 pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld 1119 (1332)
. .....+..++|++.++.|+.+. ..+.|+..++..+.....+. .....+..+++.+.+ ++++....+.|.++++.
T Consensus 244 ~-~~~~~i~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~ 318 (425)
T 1r5m_A 244 I-GHHGPISVLEFNDTNKLLLSAS-DDGTLRIWHGGNGNSQNCFY-GHSQSIVSASWVGDD--KVISCSMDGSVRLWSLK 318 (425)
T ss_dssp C-CCSSCEEEEEEETTTTEEEEEE-TTSCEEEECSSSBSCSEEEC-CCSSCEEEEEEETTT--EEEEEETTSEEEEEETT
T ss_pred c-cCCCceEEEEECCCCCEEEEEc-CCCEEEEEECCCCccceEec-CCCccEEEEEECCCC--EEEEEeCCCcEEEEECC
Confidence 1 1223467899999888776665 67889988877544443332 234467788888655 55565667899999997
Q ss_pred C-ceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCc--------------------eEEEEecC
Q psy5806 1120 G-QHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSY--------------------RTVLVEED 1178 (1332)
Q Consensus 1120 G-~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~--------------------~~~l~~~~ 1178 (1332)
. +....+......+..++++|...+|+.+... +.|...++.... ....+...
T Consensus 319 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-------g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (425)
T 1r5m_A 319 QNTLLALSIVDGVPIFAGRISQDGQKYAVAFMD-------GQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSS 391 (425)
T ss_dssp TTEEEEEEECTTCCEEEEEECTTSSEEEEEETT-------SCEEEEECHHHHC--------------CEECCEEEEECCT
T ss_pred CCcEeEecccCCccEEEEEEcCCCCEEEEEECC-------CeEEEEECCCCccceeeeecccccccCcccchhhhhhcCc
Confidence 4 4444454444678899999966666555432 457776765443 22233322
Q ss_pred CC--CcceEEEecCCCEEEEEEcCCCeEEEEecCC
Q psy5806 1179 LA--FPNELAIDFKQRRLFWADSTNKRIEYCDFFG 1211 (1332)
Q Consensus 1179 l~--~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG 1211 (1332)
.. .+..+++.++++.|+.+. ..+.|...+++|
T Consensus 392 ~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iw~~~g 425 (425)
T 1r5m_A 392 QDNDYIFDLSWNCAGNKISVAY-SLQEGSVVAIPG 425 (425)
T ss_dssp TCCCCEEEEEECTTSSEEEEEE-SSSCCEEEECCC
T ss_pred ccCCceEEEEccCCCceEEEEe-cCceEEEEeecC
Confidence 22 677889988888777664 556787777765
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.84 E-value=0.0013 Score=73.77 Aligned_cols=188 Identities=9% Similarity=-0.060 Sum_probs=124.2
Q ss_pred ceEEEEecCCCceEEEec-CCCCceEEEeCCCCCccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEecCCCCCeE
Q psy5806 751 EYIYWSDISEKTIERVRF-DMTGRERLVVNDLNRTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFWLNLYRPRS 829 (1332)
Q Consensus 751 ~~lYwsD~~~~~I~r~~~-~g~~~~~vi~~~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~~~~~P~~ 829 (1332)
+.+++++...+.|+.++. +|...-++-..+...+.++++.+.++ ||++ ..+.|...+.+|+..-.+-...-..+.+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~-ilvs--~~~~V~~~d~~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-ILFS--YSKGAKMITRDGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC-EEEE--CBSEEEEECTTSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC-EEEe--CCCCEEEECCCCCEEEEEcCCCCccccc
Confidence 345555555555555554 33332222222223577888887654 6664 3567888988887655443221123456
Q ss_pred EEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEec-----c-cccCceeEEeCCCCCeEEEEeCCCCeEEEEccC
Q psy5806 830 IVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFET-----E-VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLA 903 (1332)
Q Consensus 830 Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~-----~-l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~d 903 (1332)
.++.+. |.+++++.+.. .+|...+.+|+....+.- . ...|.+++++..+ ++++++...++|..++.+
T Consensus 82 ~~~~~d-G~~lv~~~~~~----~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G--~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 82 ARILPD-GNALVAWCGHP----STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKG--NYLVPLFATSEVREIAPN 154 (276)
T ss_dssp EEECTT-SCEEEEEESTT----EEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTS--CEEEEETTTTEEEEECTT
T ss_pred cEECCC-CCEEEEecCCC----CEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCC--CEEEEecCCCEEEEECCC
Confidence 667665 88888876623 477777788876544431 1 3467788888766 677888889999999999
Q ss_pred CCceeEEeccCCcceEEEEe-CCEEEEEeCCCCEEEEEECCCCeEEE
Q psy5806 904 TGRAKRAYAVQSHPYTLTVL-DYYVYWTDVQHSKIYRANKYDVKDIV 949 (1332)
Q Consensus 904 G~~~~~l~~~~~~P~~la~~-~~~iywtD~~~~~i~~~~~~~g~~i~ 949 (1332)
|.....+.. -..|+++... ++.++.++...++|+.+++.+|+++.
T Consensus 155 G~~~w~~~~-~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 155 GQLLNSVKL-SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVR 200 (276)
T ss_dssp SCEEEEEEC-SSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEE
T ss_pred CCEEEEEEC-CCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEE
Confidence 876666543 2568887776 67889999999999999999886655
No 198
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.83 E-value=0.14 Score=66.32 Aligned_cols=467 Identities=10% Similarity=0.039 Sum_probs=227.7
Q ss_pred ccceEeeccceeEEEecCCCCCcceeeecc-cccceeEEeecCCCceEEEEecCCCceEEEecCCCCceEEEeCCC--CC
Q psy5806 707 SKFLLVSQTDKIRQISLDVEYRYPIVLPLR-QLKMVASVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVVNDL--NR 783 (1332)
Q Consensus 707 ~~~ll~s~~~~i~~i~l~~~~~~~~~~~~~-~~~~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~~--~~ 783 (1332)
...|.+.+...+.+.+.............. ....+.+|..|. ++.||++.. +.|++.+........ +..+. ..
T Consensus 98 ~g~lWigT~~Gl~~yd~~~~~f~~~~~~~~~~~~~i~~i~~d~-~g~lwi~t~--~gl~~~~~~~~~~~~-~~~~~~~~~ 173 (795)
T 4a2l_A 98 QGRVWIGTRDGLSRYDEEKDIFQNFFYEKNGKHLQVNGIEEIS-PEQLLISTP--EGLIMFDIKESKFID-DSFSTAMHK 173 (795)
T ss_dssp TSCEEEEESSCEEEEETTTTEEEEECCEETTEECCCCEEEEEE-TTEEEEEET--TEEEEEETTTTEEEC-SSSCHHHHT
T ss_pred CCCEEEEeCCchheeCCCCCeEEeccccccCCCceEEEEEECC-CCCEEEEEC--CceEEEECCCCEEEe-ccCCCCCCc
Confidence 445666666777777654322111100000 000145566664 367777644 457777654321111 11111 12
Q ss_pred -ccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEE-ecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCC
Q psy5806 784 -TESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLF-WLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDG 861 (1332)
Q Consensus 784 -p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~-~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG 861 (1332)
+..|+.|. .++||+.... +.|.+.+..+.....+. .......++|..|+. |.|++...+. -+.+.+...
T Consensus 174 ~i~~i~~d~-~g~lwigt~~-~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~-g~lwigt~~~------Gl~~~~~~~ 244 (795)
T 4a2l_A 174 TIASTLYRQ-GDQIYIGTST-DGLYTYSITQKTFEKVIPILGTKQIQAILQQSP-TRIWVATEGA------GLFLINPKT 244 (795)
T ss_dssp CCEEEEEEE-TTEEEEEESS-SCEEEEETTTCCEEECC----CCCEEEEEEEET-TEEEEEEBSS------CEEEEETTT
T ss_pred ceEEEEECC-CCCEEEEECC-CCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCC-CCEEEEECCC------CeEEEeCCC
Confidence 55677875 4457765432 24666665433222221 111234678888875 7777655332 266655443
Q ss_pred CCcEEEecc--------cccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEec------cC--CcceEEEEeCC
Q psy5806 862 TNRAVFETE--------VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYA------VQ--SHPYTLTVLDY 925 (1332)
Q Consensus 862 ~~~~~l~~~--------l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~------~~--~~P~~la~~~~ 925 (1332)
.....+... -.....|..|..+ +|+++... -|...+......+.+.. .+ ....+|..+.+
T Consensus 245 ~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g--~lWigt~~--Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~ 320 (795)
T 4a2l_A 245 KEIKNYLHSPSNPKSISSNYIRSLAMDSQN--RLWIGTFN--DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQ 320 (795)
T ss_dssp TEEEEECCCTTCTTSCSCSBEEEEEECTTS--CEEEEESS--CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTT
T ss_pred CeEEEeecCCCCccccCCCeEEEEEEcCCC--CEEEEeCC--hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCC
Confidence 322222111 1223467777655 66665543 46666665544444321 12 22355666644
Q ss_pred EEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCC-ccccCCCCeeEccCC
Q psy5806 926 YVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTN-FTCACPTGILLSADR 1004 (1332)
Q Consensus 926 ~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~-~~C~Cp~g~~l~~d~ 1004 (1332)
-..|.-...+-|.+.++..+. +. .+... + . .++ | +.. ..+ +..|
T Consensus 321 g~lWigt~~~Gl~~~~~~~~~---------~~-~~~~~-~----~----~~~----l----~~~~V~~-------i~~d- 365 (795)
T 4a2l_A 321 GGMWLGTYFGGLNYYHPIRNR---------FK-NIRNI-P----Y----KNS----L----SDNVVSC-------IVED- 365 (795)
T ss_dssp SCEEEEESSSCEEEECGGGGS---------SE-EECCC-T----T----SSS----C----SCSSEEE-------EEEC-
T ss_pred cCEEEEECCCCeEEeCCCccc---------ce-EEcCC-C----C----CCC----C----CCCeeEE-------EEEC-
Confidence 444554444445554432220 00 11000 0 0 000 0 000 001 1111
Q ss_pred ccccccCcceEEEEeec-ceEEEEeCCCCCCCCccccc------CCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCC
Q psy5806 1005 RSCFSRTREFLLYTSRF-GVIRRISLDTADLLPVTLPF------PEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDS 1077 (1332)
Q Consensus 1005 ~tC~~~p~~~ll~~~~~-~~i~~i~l~~~~~~~~~~pi------~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g 1077 (1332)
.+..|.+.+.. . |..++...........+. .....+.++..|..++.||+.. ..+-|++++..++
T Consensus 366 ------~~g~lWiGt~~~G-l~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt-~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 366 ------KDKNLWIGTNDGG-LNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGT-HAGGLSILHRNSG 437 (795)
T ss_dssp ------TTSCEEEEESSSC-EEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEE-TTTEEEEEETTTC
T ss_pred ------CCCCEEEEECCCC-eEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEe-CcCceeEEeCCCC
Confidence 12234344432 4 555544322111000000 0123467888886654366654 4456888886532
Q ss_pred CCceeEee----cCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEEEec-----C--CCCceEEEEcCCCcEEE
Q psy5806 1078 TRIKPIPL----MNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKILVN-----D--LMEPLAIAVYPRRGLLF 1146 (1332)
Q Consensus 1078 ~~~~~i~~----~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~~~~-----~--~~~P~~iavdp~~g~Ly 1146 (1332)
. ...+.. .....+..|+.|. .++||++.. +.+.+++.+....+.+.. + ....++|+.|+ +|.|+
T Consensus 438 ~-~~~~~~~~~~l~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lW 512 (795)
T 4a2l_A 438 Q-VENFNQRNSQLVNENVYAILPDG-EGNLWLGTL--SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDS-HKRLW 512 (795)
T ss_dssp C-EEEECTTTSCCSCSCEEEEEECS-SSCEEEEES--SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECT-TCCEE
T ss_pred c-EEEeecCCCCcCCCeeEEEEECC-CCCEEEEec--CceeEEeCCCCeEEEccccccccccCCceEEEEEECC-CCCEE
Confidence 2 222211 0123567888885 677887765 457777776443333211 1 24578899997 78888
Q ss_pred EEecCCCCCCCCCcEEEEecCCCceEEEEe----cCC--CCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe-
Q psy5806 1147 YSHWGLYDNSPTTKIEKVYLDGSYRTVLVE----EDL--AFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS- 1219 (1332)
Q Consensus 1147 wtd~~~~~~~~~~~I~r~~ldG~~~~~l~~----~~l--~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~- 1219 (1332)
++..++ |.+.+.++... .+.. ..+ ....+|..|. +++|+++... -|.++|.....-+.+-.
T Consensus 513 igt~~G--------l~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigT~~--Gl~~~d~~~~~~~~~~~~ 580 (795)
T 4a2l_A 513 IGGEEG--------LSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEAS-NGIIWVGTRE--GFYCFNEKDKQIKRYNTT 580 (795)
T ss_dssp EEESSC--------EEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECT-TSCEEEEESS--CEEEEETTTTEEEEECGG
T ss_pred EEeCCc--------eEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECC-CCCEEEEeCC--CceeECCCCCcEEEeCCC
Confidence 876543 88888765443 2211 011 2355677774 5667777653 58888876543332221
Q ss_pred ----ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1220 ----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1220 ----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.....+|+. +.++.||++- .+.|.++++.++
T Consensus 581 ~gl~~~~i~~i~~------d~~g~lWi~t--~~Gl~~~~~~~~ 615 (795)
T 4a2l_A 581 NGLPNNVVYGILE------DSFGRLWLST--NRGISCFNPETE 615 (795)
T ss_dssp GTCSCSCEEEEEE------CTTSCEEEEE--TTEEEEEETTTT
T ss_pred CCCchhheEEEEE------CCCCCEEEEc--CCceEEEcCCCC
Confidence 233566777 4577888876 367888887654
No 199
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.83 E-value=0.0013 Score=83.43 Aligned_cols=200 Identities=8% Similarity=-0.124 Sum_probs=122.2
Q ss_pred ceEEEEEeCCCcEEEEEeCCC---------CeEEEEECCCC-----CCceeEee-cCCCCceeeEEEecCCeEEEEcCCC
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRS---------GNLRTFDMSDS-----TRIKPIPL-MNDTIRDNFVIDWVANNIYYIDSQM 1110 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~---------~~I~~~~l~~g-----~~~~~i~~-~~~~~p~glAvDw~~~~LY~td~~~ 1110 (1332)
...+++|++.+++|+++.... ..|+.++++++ .... .+. .+.....++++.+.++.|+++....
T Consensus 131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~ 209 (662)
T 3azo_A 131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDH 209 (662)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEEECT
T ss_pred cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCCCEEEEEECCC
Confidence 467899999999999886431 47999998731 2222 232 3334567789999999999875432
Q ss_pred -------ceEEEEeeCC-c---eEEEEecC-CCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecC
Q psy5806 1111 -------HTINVARSDG-Q---HKKILVND-LMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEED 1178 (1332)
Q Consensus 1111 -------~~I~v~~ldG-~---~~~~~~~~-~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~ 1178 (1332)
..|.++++++ . ....+..+ ...+..++.+|... ||++.... ...+|++.++++...+.+....
T Consensus 210 ~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~----~~~~l~~~~~~~~~~~~l~~~~ 284 (662)
T 3azo_A 210 PRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRT----GWWNLHRVDPATGAATQLCRRE 284 (662)
T ss_dssp TCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTT----SSCEEEEECTTTCCEEESSCCS
T ss_pred CCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCC----CCeEEEEEECCCCceeeccccc
Confidence 5799999984 2 23334333 35788999999554 66654322 1358999999666655554322
Q ss_pred --CCC------cceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe-ecccceE-EEecCCccccccEEEEEECCC-
Q psy5806 1179 --LAF------PNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS-KVAPYGL-SVRQSPGKAFIVELYWTDWEA- 1247 (1332)
Q Consensus 1179 --l~~------p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~-~~~P~gl-av~~~~~~~~~~~lYwtd~~~- 1247 (1332)
... ...+++.++++.+|.+..+..+|+.+|++|...+.+.. .....++ +. .++.++++-...
T Consensus 285 ~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~-------~~~~~~~~~~~~~ 357 (662)
T 3azo_A 285 EEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAAGPWTEWAATLTV-------SGTRAVGVAASPR 357 (662)
T ss_dssp SBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECCSSCCEEEEEEEE-------ETTEEEEEEEETT
T ss_pred ccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEecCCCCeEEEEEec-------CCCEEEEEEcCCC
Confidence 111 23566655555555444345568888888665444432 2223345 55 555555554332
Q ss_pred --CEEEEEEecCC
Q psy5806 1248 --MSVVIAREKSD 1258 (1332)
Q Consensus 1248 --~~V~~~~~~~g 1258 (1332)
.+|++++..++
T Consensus 358 ~~~~i~~~d~~~g 370 (662)
T 3azo_A 358 TAYEVVELDTVTG 370 (662)
T ss_dssp EEEEEEEEETTTC
T ss_pred CCCEEEEEECCCC
Confidence 36777776655
No 200
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=97.82 E-value=5.6e-06 Score=101.08 Aligned_cols=33 Identities=30% Similarity=0.721 Sum_probs=31.4
Q ss_pred CceecCCCCceEeCCcCcCCCCCCCCCCCCCCC
Q psy5806 18 QYKKCNRTGACIPAQWQCDNEFDCEMGEDEMKC 50 (1332)
Q Consensus 18 ~~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE~~C 50 (1332)
.+|+|..+|+|||..|+|||+.||.|||||.+|
T Consensus 69 ~~f~C~~~g~Ci~~~~~Cdg~~dC~d~sdE~~c 101 (537)
T 3ojy_B 69 EGFVCAQTGRCVNRRLLCNGDNDCGDQSDEANC 101 (537)
T ss_dssp SSEECTTTCCEECGGGTTSSSCCSSSSCTTSSC
T ss_pred CccCcCCCCcEeeccccCCCCCCCCCccccccC
Confidence 799997579999999999999999999999998
No 201
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.82 E-value=8.4e-06 Score=66.51 Aligned_cols=40 Identities=30% Similarity=0.708 Sum_probs=35.3
Q ss_pred ccccCCC----------CcceeeeccCCCceEEeCCCCceecCCCCCcCC
Q psy5806 392 YQSHCAP----------KVCSHICLPNKHRFTCQCPLGLTLSPDNKSCSE 431 (1332)
Q Consensus 392 ~~n~C~~----------g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~~ 431 (1332)
++|+|.. +.|+|.|++.+++|+|.|+.||+|..|+++|.+
T Consensus 3 DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred ccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCccCC
Confidence 4578872 679999999999999999999999999999963
No 202
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=97.73 E-value=7.6e-06 Score=99.93 Aligned_cols=36 Identities=36% Similarity=0.697 Sum_probs=32.9
Q ss_pred CCCCCceecCCCCceEeCCcCcCCCCCCCCCCCCCCC
Q psy5806 14 QEIPQYKKCNRTGACIPAQWQCDNEFDCEMGEDEMKC 50 (1332)
Q Consensus 14 ~c~~~~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE~~C 50 (1332)
.|. .+|+|..+|+|||..|+|||+.||.|||||.+|
T Consensus 65 ~c~-~~f~C~~~g~Ci~~~~~Cdg~~dC~d~sDE~~C 100 (554)
T 3ojy_A 65 QCG-QDFQCKETGRCLKRHLVCNGDQDCLDGSDEDDC 100 (554)
T ss_dssp CCS-SSEECSSSCCEECGGGTTSSSCCSSSCTTSSSC
T ss_pred CCC-CcCccCCCCEEcccccccCCcccCCCccccccC
Confidence 464 799997579999999999999999999999999
No 203
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.72 E-value=0.02 Score=64.66 Aligned_cols=191 Identities=6% Similarity=-0.034 Sum_probs=126.4
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKI 1125 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~ 1125 (1332)
.+..++|++.++.|+... ..+.|+..++.++..... +......+..+++++.++.|+.+. ..+.|.++++.......
T Consensus 143 ~i~~~~~~~~~~~l~~~~-~dg~v~~~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~ 219 (337)
T 1gxr_A 143 ACYALAISPDSKVCFSCC-SDGNIAVWDLHNQTLVRQ-FQGHTDGASCIDISNDGTKLWTGG-LDNTVRSWDLREGRQLQ 219 (337)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEEE-ECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTTEEEE
T ss_pred ceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCceeee-eecccCceEEEEECCCCCEEEEEe-cCCcEEEEECCCCceEe
Confidence 467899999888777765 678899999874432222 223345678899987776676554 56789999987544333
Q ss_pred EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEE
Q psy5806 1126 LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIE 1205 (1332)
Q Consensus 1126 ~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~ 1205 (1332)
.......+..++++|....|+..... +.|...++.......+.. .-..+..+++.++++.|+.+ ...+.|.
T Consensus 220 ~~~~~~~v~~~~~s~~~~~l~~~~~~-------~~i~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~dg~i~ 290 (337)
T 1gxr_A 220 QHDFTSQIFSLGYCPTGEWLAVGMES-------SNVEVLHVNKPDKYQLHL-HESCVLSLKFAYCGKWFVST-GKDNLLN 290 (337)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTSSCEEEECC-CSSCEEEEEECTTSSEEEEE-ETTSEEE
T ss_pred eecCCCceEEEEECCCCCEEEEEcCC-------CcEEEEECCCCCeEEEcC-CccceeEEEECCCCCEEEEe-cCCCcEE
Confidence 22334568999999976667666533 468888888766544432 34567789999887777655 4678899
Q ss_pred EEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEE
Q psy5806 1206 YCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAR 1254 (1332)
Q Consensus 1206 ~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~ 1254 (1332)
..++.......... ...+.++++ .+.+.+|+.+. ..+.|...+
T Consensus 291 ~~~~~~~~~~~~~~~~~~v~~~~~-----s~~~~~l~~~~-~dg~i~iw~ 334 (337)
T 1gxr_A 291 AWRTPYGASIFQSKESSSVLSCDI-----SVDDKYIVTGS-GDKKATVYE 334 (337)
T ss_dssp EEETTTCCEEEEEECSSCEEEEEE-----CTTSCEEEEEE-TTSCEEEEE
T ss_pred EEECCCCeEEEEecCCCcEEEEEE-----CCCCCEEEEec-CCCeEEEEE
Confidence 99987655443333 566777887 23344555444 456665554
No 204
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.71 E-value=0.0058 Score=70.76 Aligned_cols=234 Identities=10% Similarity=-0.059 Sum_probs=145.2
Q ss_pred CcceEEEEeecceEEEEeCCCCCCCCccc-cc-CCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCC
Q psy5806 1011 TREFLLYTSRFGVIRRISLDTADLLPVTL-PF-PEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMND 1088 (1332)
Q Consensus 1011 p~~~ll~~~~~~~i~~i~l~~~~~~~~~~-pi-~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~ 1088 (1332)
|+..|+.+..+..|+.-+++......... .. ..-..+.+++|++.++.|.-.. ..+.|+..++.++.....+. ...
T Consensus 92 ~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs-~d~~i~iwd~~~~~~~~~~~-~h~ 169 (344)
T 4gqb_B 92 GERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS-KDICIKVWDLAQQVVLSSYR-AHA 169 (344)
T ss_dssp TTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEEEEC-CCS
T ss_pred CCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEe-CCCeEEEEECCCCcEEEEEc-CcC
Confidence 44555555554436666665443221111 11 1123467999999888776554 77889999987543332222 234
Q ss_pred CCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEEEEe--cCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEe
Q psy5806 1089 TIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKKILV--NDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVY 1165 (1332)
Q Consensus 1089 ~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~~~~--~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ 1165 (1332)
..+..+++.+.+..++++-...+.|.++++. ++....+. .....+..++++|..+.++.+-... +.|...+
T Consensus 170 ~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d------g~v~~wd 243 (344)
T 4gqb_B 170 AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN------GTVSLVD 243 (344)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT------SEEEEEE
T ss_pred CceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC------CcEEEEE
Confidence 4678899988888888887777899999987 44444432 2224578999999888887775443 5677777
Q ss_pred cCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEE
Q psy5806 1166 LDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTD 1244 (1332)
Q Consensus 1166 ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd 1244 (1332)
+........+...-...+.|++.+++.++..+-...+.|...|+.......+.. .....+|++ .+.+.+|..+-
T Consensus 244 ~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~-----sp~~~~llas~ 318 (344)
T 4gqb_B 244 TKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATW-----SPLNHSLLTTV 318 (344)
T ss_dssp SCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEE-----CSSSTTEEEEE
T ss_pred CCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEE-----eCCCCeEEEEE
Confidence 754443333333335567889988877766666677889888886543222222 445677777 23455677676
Q ss_pred CCCCEEEEEEecC
Q psy5806 1245 WEAMSVVIAREKS 1257 (1332)
Q Consensus 1245 ~~~~~V~~~~~~~ 1257 (1332)
...++|..-+..+
T Consensus 319 s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 319 GWDHQVVHHVVPT 331 (344)
T ss_dssp ETTSCEEEEECCC
T ss_pred cCCCeEEEEECCC
Confidence 6677887776544
No 205
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.70 E-value=0.002 Score=75.22 Aligned_cols=202 Identities=8% Similarity=-0.069 Sum_probs=121.2
Q ss_pred EEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCc--eeeEEEecCCeEEEE--------------------
Q psy5806 1049 FFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIR--DNFVIDWVANNIYYI-------------------- 1106 (1332)
Q Consensus 1049 ~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p--~glAvDw~~~~LY~t-------------------- 1106 (1332)
++.|++.+++|+++. ....|+.+++.++... .+........ ...+++..++.|+..
T Consensus 85 ~~~~spdg~~l~~~~-~~~~l~~~d~~~g~~~-~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~ 162 (388)
T 3pe7_A 85 GGFLSPDDDALFYVK-DGRNLMRVDLATLEEN-VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFY 162 (388)
T ss_dssp SCEECTTSSEEEEEE-TTTEEEEEETTTCCEE-EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHG
T ss_pred ceEEcCCCCEEEEEe-CCCeEEEEECCCCcce-eeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhh
Confidence 457899999999987 4468999998854332 3332211111 112334445555422
Q ss_pred -cCCCceEEEEeeCCceEEEEecCCCCceEEEEcC-CCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCC-CCcc
Q psy5806 1107 -DSQMHTINVARSDGQHKKILVNDLMEPLAIAVYP-RRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDL-AFPN 1183 (1332)
Q Consensus 1107 -d~~~~~I~v~~ldG~~~~~~~~~~~~P~~iavdp-~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l-~~p~ 1183 (1332)
......|.++++++...+.+.........++++| ...+|.++..+.. +....+|+.++++|.....+....- ....
T Consensus 163 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~-~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~ 241 (388)
T 3pe7_A 163 FTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPH-DLVDARMWLINEDGTNMRKVKTHAEGESCT 241 (388)
T ss_dssp GGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCT-TTSSCSEEEEETTSCCCEESCCCCTTEEEE
T ss_pred ccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCC-CCCcceEEEEeCCCCceEEeeeCCCCcccc
Confidence 1233578888887554444444445678899999 7777777654320 1124589999999987766654221 1234
Q ss_pred eEEEecCCCEEEEE-EcCCC---eEEEEecCCCceEEEEe--e-----cccceEEEecCCccccccEEEEEE--------
Q psy5806 1184 ELAIDFKQRRLFWA-DSTNK---RIEYCDFFGRSRKIVIS--K-----VAPYGLSVRQSPGKAFIVELYWTD-------- 1244 (1332)
Q Consensus 1184 glaiD~~~~~LY~~-d~~~~---~I~~~d~dG~~~~~~~~--~-----~~P~glav~~~~~~~~~~~lYwtd-------- 1244 (1332)
.+++.+++++|+++ +.... .|...|+++...+.+.. . ..|.++++ .+++.+|+++-
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~-----spdg~~l~~~~~~~~~~~~ 316 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLM-----VGDGSDAPVDVQDDSGYKI 316 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEE-----EEEECCC------------
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeE-----ccCCCcceeEeeecccccc
Confidence 57889899888554 43322 39999998776655544 1 22445444 33666777653
Q ss_pred CCCCEEEEEEecCC
Q psy5806 1245 WEAMSVVIAREKSD 1258 (1332)
Q Consensus 1245 ~~~~~V~~~~~~~g 1258 (1332)
.....|+.++..++
T Consensus 317 ~~~~~i~~~d~~~~ 330 (388)
T 3pe7_A 317 ENDPFLYVFNMKNG 330 (388)
T ss_dssp CCCCEEEEEETTTT
T ss_pred CCCCEEEEEeccCC
Confidence 45678888888776
No 206
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.70 E-value=0.3 Score=62.85 Aligned_cols=197 Identities=13% Similarity=-0.003 Sum_probs=114.2
Q ss_pred ceeEEeecCCCceEEEEecCCCceEEEecCCCCceEEEeCCCCCccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEE
Q psy5806 740 MVASVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVVNDLNRTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVL 819 (1332)
Q Consensus 740 ~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l 819 (1332)
.+.++++++.+..|..+. .++.|...+.........+...-..+..+++.+.++.|..... .+.|.+.+++.......
T Consensus 15 ~v~~i~~sp~~~~la~~~-~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~vw~~~~~~~~~~ 92 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTL-YSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD-DFRIRVFNYNTGEKVVD 92 (814)
T ss_dssp CEEEEEECSSSSEEEEEE-TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET-TSEEEEEETTTCCEEEE
T ss_pred ceEEEEECCCCCEEEEEe-CCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC-CCeEEEEECCCCcEEEE
Confidence 467788888766666554 4566777665443333333334456788999988887766654 67899999864433322
Q ss_pred EecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCC-cEEEecc-cccCceeEEeCCCCCeEEEEeCCCCeE
Q psy5806 820 FWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTN-RAVFETE-VIWPSCLAIDYSDNPKLYWVDTSKHTI 897 (1332)
Q Consensus 820 ~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~-~~~l~~~-l~~P~gl~iD~~~~~~lYw~d~~~~~I 897 (1332)
+.......+.++++|...+|+.... . ..|...+++... ....... -.....+++.+.. +.++.+-...+.|
T Consensus 93 ~~~~~~~v~~~~~s~~~~~l~~~~~--d----g~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~~l~~~~~dg~v 165 (814)
T 3mkq_A 93 FEAHPDYIRSIAVHPTKPYVLSGSD--D----LTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKD-PSTFASGCLDRTV 165 (814)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEET--T----SEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTE-EEEEEEEETTSEE
T ss_pred EecCCCCEEEEEEeCCCCEEEEEcC--C----CEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCC-CCEEEEEeCCCeE
Confidence 3333356889999998666665442 2 457776766542 2222222 3445678887733 3455555556788
Q ss_pred EEEccCCCce-eEEeccC-CcceEEEEe---CCEEEEEeCCCCEEEEEECCCC
Q psy5806 898 EYKTLATGRA-KRAYAVQ-SHPYTLTVL---DYYVYWTDVQHSKIYRANKYDV 945 (1332)
Q Consensus 898 ~~~~~dG~~~-~~l~~~~-~~P~~la~~---~~~iywtD~~~~~i~~~~~~~g 945 (1332)
...++.+... ..+.... .....+++. ++.++.+-..++.|...+..++
T Consensus 166 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 218 (814)
T 3mkq_A 166 KVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (814)
T ss_dssp EEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT
T ss_pred EEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 8888764433 3332222 333455554 3344444445566666555554
No 207
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.67 E-value=0.002 Score=82.33 Aligned_cols=201 Identities=9% Similarity=0.024 Sum_probs=121.3
Q ss_pred eEEEEEeCCCcEEEEEeC--------------------------------CCCeEEEEECCCCCCceeEee-cCCCCcee
Q psy5806 1047 SIFFDYHYSKNLIYFADM--------------------------------RSGNLRTFDMSDSTRIKPIPL-MNDTIRDN 1093 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~--------------------------------~~~~I~~~~l~~g~~~~~i~~-~~~~~p~g 1093 (1332)
+.++.|++.+++|+++.. ....|+.+++.++....+... .....+..
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 468899999999998762 235688888774322211111 11124567
Q ss_pred eEEEecCCeEEEEcCCC----ceEEEEeeCCc-eEEEEe-c-CC---CCceEEEEcC--CCcEEEEEecCCCCCCCCCcE
Q psy5806 1094 FVIDWVANNIYYIDSQM----HTINVARSDGQ-HKKILV-N-DL---MEPLAIAVYP--RRGLLFYSHWGLYDNSPTTKI 1161 (1332)
Q Consensus 1094 lAvDw~~~~LY~td~~~----~~I~v~~ldG~-~~~~~~-~-~~---~~P~~iavdp--~~g~Lywtd~~~~~~~~~~~I 1161 (1332)
+++.+.++.|+++.... ..|.++++++. ....+. . .. ....+++++| ...+||.++... ..+|
T Consensus 263 ~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g-----~~~l 337 (706)
T 2z3z_A 263 LSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG-----WNHL 337 (706)
T ss_dssp EEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS-----SCEE
T ss_pred EEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC-----ccEE
Confidence 88888888898864332 36778888754 433322 1 11 1235789998 665555554333 4689
Q ss_pred EEEecCCCceEEEEecCCCCcce-EEEecCCCEEEEEEcCCC----eEEEEecCCCceEEEEeecccceEEEecCCcccc
Q psy5806 1162 EKVYLDGSYRTVLVEEDLAFPNE-LAIDFKQRRLFWADSTNK----RIEYCDFFGRSRKIVISKVAPYGLSVRQSPGKAF 1236 (1332)
Q Consensus 1162 ~r~~ldG~~~~~l~~~~l~~p~g-laiD~~~~~LY~~d~~~~----~I~~~d~dG~~~~~~~~~~~P~glav~~~~~~~~ 1236 (1332)
+.++++|.....+.. .-..... +++++++++||++....+ .|+++++++...+.+.......++++ +++
T Consensus 338 ~~~~~~~~~~~~l~~-~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~-----spd 411 (706)
T 2z3z_A 338 YLYDTTGRLIRQVTK-GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPESGMHRTQL-----SPD 411 (706)
T ss_dssp EEEETTSCEEEECCC-SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSSEEEEEE-----CTT
T ss_pred EEEECCCCEEEecCC-CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCCceEEEEE-----CCC
Confidence 999988876555533 2122334 789999999999987755 89999998765444333333445566 234
Q ss_pred ccEEEEEECC---CCEEEEEEecCC
Q psy5806 1237 IVELYWTDWE---AMSVVIAREKSD 1258 (1332)
Q Consensus 1237 ~~~lYwtd~~---~~~V~~~~~~~g 1258 (1332)
+.+|.++-.. ...|+..+..++
T Consensus 412 g~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 412 GSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp SSEEEEEEECSSCSCEEEEEESSSC
T ss_pred CCEEEEEecCCCCCcEEEEEECCCC
Confidence 4455544322 245666666554
No 208
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.63 E-value=0.07 Score=60.92 Aligned_cols=214 Identities=7% Similarity=-0.045 Sum_probs=131.5
Q ss_pred eEEEEeecceEEEEeCCCCCCCCcccccCC-ccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCce
Q psy5806 1014 FLLYTSRFGVIRRISLDTADLLPVTLPFPE-YMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRD 1092 (1332)
Q Consensus 1014 ~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~-~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~ 1092 (1332)
+|+....+..|+..++..... ...+.+ ...+.+++|++.++.|+.+. ..+.|...++.++.....+. ....+.
T Consensus 46 ~l~~~~~dg~i~vwd~~~~~~---~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~--~~~~v~ 119 (369)
T 3zwl_B 46 LLFSCSKDSSASVWYSLNGER---LGTLDGHTGTIWSIDVDCFTKYCVTGS-ADYSIKLWDVSNGQCVATWK--SPVPVK 119 (369)
T ss_dssp EEEEEESSSCEEEEETTTCCE---EEEECCCSSCEEEEEECTTSSEEEEEE-TTTEEEEEETTTCCEEEEEE--CSSCEE
T ss_pred EEEEEeCCCEEEEEeCCCchh---hhhhhhcCCcEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCcEEEEee--cCCCeE
Confidence 444444333266666553321 222222 23467999999887776665 67899999987554433332 445688
Q ss_pred eeEEEecCCeEEEEcCC----CceEEEEeeCCce------------EEEEe--cCCCCceEEEEcCCCcEEEEEecCCCC
Q psy5806 1093 NFVIDWVANNIYYIDSQ----MHTINVARSDGQH------------KKILV--NDLMEPLAIAVYPRRGLLFYSHWGLYD 1154 (1332)
Q Consensus 1093 glAvDw~~~~LY~td~~----~~~I~v~~ldG~~------------~~~~~--~~~~~P~~iavdp~~g~Lywtd~~~~~ 1154 (1332)
.+++.+.++.|+.+... .+.|.++++.... ...+. .+......++++|...+|+.+...
T Consensus 120 ~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--- 196 (369)
T 3zwl_B 120 RVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD--- 196 (369)
T ss_dssp EEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT---
T ss_pred EEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC---
Confidence 99999888877766543 2688888886321 11111 122378899999965566555432
Q ss_pred CCCCCcEEEEecCC-CceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe-ecccceEEEecCC
Q psy5806 1155 NSPTTKIEKVYLDG-SYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSP 1232 (1332)
Q Consensus 1155 ~~~~~~I~r~~ldG-~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~ 1232 (1332)
+.|...++.. ......+...-.....++++++++.|+.+ ...+.|...|+.......... ......+++
T Consensus 197 ----g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~---- 267 (369)
T 3zwl_B 197 ----GKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITS-SRDTNSFLVDVSTLQVLKKYETDCPLNTAVI---- 267 (369)
T ss_dssp ----SEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEEEEEECSSCEEEEEE----
T ss_pred ----CEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEe-cCCceEEEEECCCCceeeeecCCCCceeEEe----
Confidence 5688888876 33333343334567789999888777766 466789999987554433333 445566666
Q ss_pred ccccccEEEEEECC
Q psy5806 1233 GKAFIVELYWTDWE 1246 (1332)
Q Consensus 1233 ~~~~~~~lYwtd~~ 1246 (1332)
.+.+.+|+.+...
T Consensus 268 -~~~~~~l~~~~~~ 280 (369)
T 3zwl_B 268 -TPLKEFIILGGGQ 280 (369)
T ss_dssp -CSSSSEEEEEECC
T ss_pred -cCCCceEEEeecC
Confidence 3456666666543
No 209
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.63 E-value=0.0034 Score=73.34 Aligned_cols=182 Identities=9% Similarity=-0.042 Sum_probs=112.7
Q ss_pred CeEEEEECCCCCCceeEeecCCCCceeeEEEe-cCCeEEEEcCC-----CceEEEEeeCCceEEEEecCCC--CceEEEE
Q psy5806 1067 GNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDW-VANNIYYIDSQ-----MHTINVARSDGQHKKILVNDLM--EPLAIAV 1138 (1332)
Q Consensus 1067 ~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw-~~~~LY~td~~-----~~~I~v~~ldG~~~~~~~~~~~--~P~~iav 1138 (1332)
..|+.+++.+| ....+. ........+++.+ .++.|+++... ...|.+++++|.....+..... ....++.
T Consensus 168 ~~l~~~d~~~g-~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~ 245 (388)
T 3pe7_A 168 CRLMRVDLKTG-ESTVIL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFW 245 (388)
T ss_dssp EEEEEEETTTC-CEEEEE-EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEE
T ss_pred ceEEEEECCCC-ceEEee-cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceE
Confidence 56888888744 333333 3334567889988 78888665433 3478888888776655443321 2456789
Q ss_pred cCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCC-----CCcceEEEecCCCEEEEEE--------cCCCeEE
Q psy5806 1139 YPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDL-----AFPNELAIDFKQRRLFWAD--------STNKRIE 1205 (1332)
Q Consensus 1139 dp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l-----~~p~glaiD~~~~~LY~~d--------~~~~~I~ 1205 (1332)
+|...+|+|+.... +.....|++.++++...+.+....- ..|.++++.+++++|+++- .....|.
T Consensus 246 spdg~~l~~~~~~~--~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~ 323 (388)
T 3pe7_A 246 VPDGSALVYVSYLK--GSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLY 323 (388)
T ss_dssp CTTSSCEEEEEEET--TCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEE
T ss_pred CCCCCEEEEEecCC--CCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEE
Confidence 99777676654322 0112249999998877665543211 1256678888888888763 4566899
Q ss_pred EEecCCCceEEEEe-ec-----------ccceEEEecCCccccccEEEEEEC--CCCEEEEEEecC
Q psy5806 1206 YCDFFGRSRKIVIS-KV-----------APYGLSVRQSPGKAFIVELYWTDW--EAMSVVIAREKS 1257 (1332)
Q Consensus 1206 ~~d~dG~~~~~~~~-~~-----------~P~glav~~~~~~~~~~~lYwtd~--~~~~V~~~~~~~ 1257 (1332)
.+|+++...+.+.. .. ....+++ ++++.+||++.. ....|+++++..
T Consensus 324 ~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----spDg~~l~~~s~~~g~~~l~~~~l~~ 384 (388)
T 3pe7_A 324 VFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSF-----TPDDKQILFTSDVHGKPALYLATLPE 384 (388)
T ss_dssp EEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEE-----CTTSSEEEEEECTTSSCEEEEEECCG
T ss_pred EEeccCCceEEeccccCcccccccccccCCCCccC-----CCCCCEEEEEecCCCceeEEEEECCh
Confidence 99998876555554 22 3455666 446778888764 344566666543
No 210
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.54 E-value=0.038 Score=64.89 Aligned_cols=201 Identities=8% Similarity=-0.101 Sum_probs=131.4
Q ss_pred cceEEEEEeC-CCcEEEEEeCCCCeEEEEECCCCCC------ceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEe
Q psy5806 1045 MSSIFFDYHY-SKNLIYFADMRSGNLRTFDMSDSTR------IKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVAR 1117 (1332)
Q Consensus 1045 ~~~~~id~d~-~~~~lY~sd~~~~~I~~~~l~~g~~------~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ 1117 (1332)
..+.+++|++ .++.|+.. ...+.|...++..+.. ....+......+..|++.+.+++++++-...+.|.+++
T Consensus 82 ~~V~~~~~~p~~~~~l~s~-s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 160 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVIASG-SEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWD 160 (402)
T ss_dssp SCEEEEEECTTCTTEEEEE-ETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEE
T ss_pred CCEEEEEeCCCCCCEEEEE-eCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEE
Confidence 3568999999 55555544 4788999999875531 12222233456788999987766777766778899999
Q ss_pred eCCce-EEEE--ecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEE-ecCC-CCcceEEEecCCC
Q psy5806 1118 SDGQH-KKIL--VNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLV-EEDL-AFPNELAIDFKQR 1192 (1332)
Q Consensus 1118 ldG~~-~~~~--~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~-~~~l-~~p~glaiD~~~~ 1192 (1332)
+.... ...+ .........|+++|...+|+.+.. . +.|...++........+ ...- ..+..+++.+++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (402)
T 2aq5_A 161 VGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR-D------KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGK 233 (402)
T ss_dssp TTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET-T------SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTE
T ss_pred CCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec-C------CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCc
Confidence 97443 3335 333456789999995555555443 2 56888887655443333 2221 2367888887655
Q ss_pred EEEEEE--cCCCeEEEEecCCCce-EEEE--e-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1193 RLFWAD--STNKRIEYCDFFGRSR-KIVI--S-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1193 ~LY~~d--~~~~~I~~~d~dG~~~-~~~~--~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.|+... ...+.|...|+..... ..+. . ...+..+++ ++.+.+||++-...+.|...+..++
T Consensus 234 ~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~-----s~~~~~l~~~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 234 ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFF-----DPDTNIVYLCGKGDSSIRYFEITSE 300 (402)
T ss_dssp EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEE-----ETTTTEEEEEETTCSCEEEEEECSS
T ss_pred EEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEE-----cCCCCEEEEEEcCCCeEEEEEecCC
Confidence 444432 4678899999875432 2222 2 445667777 4457788888888899999998877
No 211
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.51 E-value=0.11 Score=60.80 Aligned_cols=226 Identities=11% Similarity=0.013 Sum_probs=142.5
Q ss_pred eEEEEeecceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCcee
Q psy5806 1014 FLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDN 1093 (1332)
Q Consensus 1014 ~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~g 1093 (1332)
.+..+.... |+..++....... ......-..+..++|++.++.|+... ..+.|...++.++.....+. ........
T Consensus 106 l~~~~~d~~-v~lw~~~~~~~~~-~~~~~~~~~v~~v~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~-~~~~~v~~ 181 (401)
T 4aez_A 106 VVAVALERN-VYVWNADSGSVSA-LAETDESTYVASVKWSHDGSFLSVGL-GNGLVDIYDVESQTKLRTMA-GHQARVGC 181 (401)
T ss_dssp EEEEEETTE-EEEEETTTCCEEE-EEECCTTCCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCCEEEEEC-CCSSCEEE
T ss_pred EEEEECCCe-EEEeeCCCCcEeE-eeecCCCCCEEEEEECCCCCEEEEEC-CCCeEEEEECcCCeEEEEec-CCCCceEE
Confidence 344444444 7777765433211 11222234578999999888777765 67889999987543333332 22334555
Q ss_pred eEEEecCCeEEEEcCCCceEEEEeeC-Cce-EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCce
Q psy5806 1094 FVIDWVANNIYYIDSQMHTINVARSD-GQH-KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYR 1171 (1332)
Q Consensus 1094 lAvDw~~~~LY~td~~~~~I~v~~ld-G~~-~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~ 1171 (1332)
++++ ++.| ++-...+.|.++++. +.. ...+........+++++|...+|+.... . +.|...++.....
T Consensus 182 ~~~~--~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d------~~v~iwd~~~~~~ 251 (401)
T 4aez_A 182 LSWN--RHVL-SSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGN-D------NVVQIWDARSSIP 251 (401)
T ss_dssp EEEE--TTEE-EEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET-T------SCEEEEETTCSSE
T ss_pred EEEC--CCEE-EEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeC-C------CeEEEccCCCCCc
Confidence 6554 5555 455556799999997 333 3335444467899999995555554443 2 4688888876555
Q ss_pred EEEEecCCCCcceEEEecCCCEEEEEEc--CCCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEE-CCC
Q psy5806 1172 TVLVEEDLAFPNELAIDFKQRRLFWADS--TNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTD-WEA 1247 (1332)
Q Consensus 1172 ~~l~~~~l~~p~glaiD~~~~~LY~~d~--~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd-~~~ 1247 (1332)
...+...-.....+++.++++.|+.+-. ..+.|...|+........+. .....++++ .+.+.+|+.+. ...
T Consensus 252 ~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~-----s~~~~~l~~~~g~~d 326 (401)
T 4aez_A 252 KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIW-----SPHSKEIMSTHGFPD 326 (401)
T ss_dssp EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEE-----CSSSSEEEEEECTTT
T ss_pred cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEE-----CCCCCeEEEEeecCC
Confidence 4444434456788999998888888754 57889999987554433334 556778888 34456666653 367
Q ss_pred CEEEEEEecCC
Q psy5806 1248 MSVVIAREKSD 1258 (1332)
Q Consensus 1248 ~~V~~~~~~~g 1258 (1332)
+.|...+..++
T Consensus 327 g~i~v~~~~~~ 337 (401)
T 4aez_A 327 NNLSIWSYSSS 337 (401)
T ss_dssp CEEEEEEEETT
T ss_pred CcEEEEecCCc
Confidence 88988888775
No 212
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.51 E-value=0.079 Score=60.26 Aligned_cols=212 Identities=13% Similarity=0.037 Sum_probs=133.9
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCC-ceEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDG-QHKK 1124 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG-~~~~ 1124 (1332)
.+.++++.+....+. +-...+.|+..++.++.....+. ........+++.+.++.|. +....+.|.++++.. +...
T Consensus 82 ~v~~~~~~~~~~~l~-s~s~D~~i~lWd~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~-~g~~dg~v~i~~~~~~~~~~ 158 (321)
T 3ow8_A 82 GVVSVDISHTLPIAA-SSSLDAHIRLWDLENGKQIKSID-AGPVDAWTLAFSPDSQYLA-TGTHVGKVNIFGVESGKKEY 158 (321)
T ss_dssp CEEEEEECSSSSEEE-EEETTSEEEEEETTTTEEEEEEE-CCTTCCCCEEECTTSSEEE-EECTTSEEEEEETTTCSEEE
T ss_pred CEEEEEECCCCCEEE-EEeCCCcEEEEECCCCCEEEEEe-CCCccEEEEEECCCCCEEE-EEcCCCcEEEEEcCCCceeE
Confidence 467888888776554 44478889999987554333332 3344567899998777665 445567899999874 4333
Q ss_pred EEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeE
Q psy5806 1125 ILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRI 1204 (1332)
Q Consensus 1125 ~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I 1204 (1332)
.+.........++++|...+|...... +.|...++........+...-.....|+++++++.|.-+ ...+.|
T Consensus 159 ~~~~~~~~v~~~~~spdg~~lasg~~d-------g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~-s~dg~i 230 (321)
T 3ow8_A 159 SLDTRGKFILSIAYSPDGKYLASGAID-------GIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTA-SDDGYI 230 (321)
T ss_dssp EEECSSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEE-CTTSCE
T ss_pred EecCCCceEEEEEECCCCCEEEEEcCC-------CeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEE-cCCCeE
Confidence 354444567899999966555554432 467777776544433343333456789999887766654 567789
Q ss_pred EEEecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEecCCCCeeeE
Q psy5806 1205 EYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRSNQEDFLNI 1277 (1332)
Q Consensus 1205 ~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~~~~~~~~i 1277 (1332)
...|+........+. ......|++ .+.+. +.++-...++|...+..++ .....+......+..+
T Consensus 231 ~iwd~~~~~~~~~~~~h~~~v~~~~~-----sp~~~-~l~s~s~D~~v~iwd~~~~---~~~~~~~~h~~~v~~v 296 (321)
T 3ow8_A 231 KIYDVQHANLAGTLSGHASWVLNVAF-----CPDDT-HFVSSSSDKSVKVWDVGTR---TCVHTFFDHQDQVWGV 296 (321)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEE-----CTTSS-EEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEE
T ss_pred EEEECCCcceeEEEcCCCCceEEEEE-----CCCCC-EEEEEeCCCcEEEEeCCCC---EEEEEEcCCCCcEEEE
Confidence 998987544333332 455677888 22334 4455557789999998777 5555544433334333
No 213
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.14 Score=59.70 Aligned_cols=320 Identities=9% Similarity=-0.025 Sum_probs=163.5
Q ss_pred CCccceeEecCCCeEEEEeCCCCeEEEEeC----CCCc------eEEEEec----------CCCCCeEEEEeCCCCeEEE
Q psy5806 782 NRTESIAVDAIGRKIYWTDMNAQTIMVSDI----DGKN------AKVLFWL----------NLYRPRSIVVHYGLGLMVW 841 (1332)
Q Consensus 782 ~~p~glAvD~~~~nLYwtD~~~~~I~v~~l----dG~~------~~~l~~~----------~~~~P~~Iavdp~~g~lyw 841 (1332)
..+..+++.+.++++..+-...+.|.+.++ .... ....+.. ......+|++.|...+|+.
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 125 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVT 125 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEE
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEE
Confidence 456788888877734445455678888888 5333 1222221 1125788999997555655
Q ss_pred EecccCcCCCCceEEEecCCCCcEEEecccccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEec-cCCc----
Q psy5806 842 ADWSRTRLTNNRIEMAHMDGTNRAVFETEVIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYA-VQSH---- 916 (1332)
Q Consensus 842 td~g~~~~~~~~I~r~~~dG~~~~~l~~~l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~-~~~~---- 916 (1332)
.... ..|.....+|.....+...-.....+++...+ +.|+.+. ..+.|...++.......... ....
T Consensus 126 ~~~d------g~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 126 GVEN------GELRLWNKTGALLNVLNFHRAPIVSVKWNKDG-THIISMD-VENVTILWNVISGTVMQHFELKETGGSSI 197 (425)
T ss_dssp EETT------SCEEEEETTSCEEEEECCCCSCEEEEEECTTS-SEEEEEE-TTCCEEEEETTTTEEEEEECCC-------
T ss_pred EeCC------CeEEEEeCCCCeeeeccCCCccEEEEEECCCC-CEEEEEe-cCCeEEEEECCCCcEEEEeeccccCccce
Confidence 4432 35666666666555444334556688888877 6666655 45677777775433222211 1111
Q ss_pred -----------ceEEEEeCCEEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCcccccc
Q psy5806 917 -----------PYTLTVLDYYVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLR 985 (1332)
Q Consensus 917 -----------P~~la~~~~~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~ 985 (1332)
...+++..+..+.+-...+.|...+...++.+ . .+. . ..+....+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~--------~-~~~-----~-------~~~~i~~~--- 253 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPT--------G-KLI-----G-------HHGPISVL--- 253 (425)
T ss_dssp --------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCS--------E-EEC-----C-------CSSCEEEE---
T ss_pred eeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCcee--------e-eec-----c-------CCCceEEE---
Confidence 22233332222222222233332222111000 0 000 0 00000000
Q ss_pred CCCCccccCCCCeeEccCCccccccCcceEEEEeecceEEEEeCCCCCCCCcccccC-CccceEEEEEeCCCcEEEEEeC
Q psy5806 986 NPTNFTCACPTGILLSADRRSCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLPFP-EYMSSIFFDYHYSKNLIYFADM 1064 (1332)
Q Consensus 986 ~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~-~~~~~~~id~d~~~~~lY~sd~ 1064 (1332)
.+.. ...+|+....+..|+..++....... .+. ....+..++|.+.+ ++++-.
T Consensus 254 -------------~~~~--------~~~~l~~~~~d~~i~i~d~~~~~~~~---~~~~~~~~i~~~~~~~~~--~l~~~~ 307 (425)
T 1r5m_A 254 -------------EFND--------TNKLLLSASDDGTLRIWHGGNGNSQN---CFYGHSQSIVSASWVGDD--KVISCS 307 (425)
T ss_dssp -------------EEET--------TTTEEEEEETTSCEEEECSSSBSCSE---EECCCSSCEEEEEEETTT--EEEEEE
T ss_pred -------------EECC--------CCCEEEEEcCCCEEEEEECCCCccce---EecCCCccEEEEEECCCC--EEEEEe
Confidence 0111 12344444433326666655332221 112 22346789999877 445555
Q ss_pred CCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCce---------------------E
Q psy5806 1065 RSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQH---------------------K 1123 (1332)
Q Consensus 1065 ~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~---------------------~ 1123 (1332)
..+.|+..++.++.....+. .....+..+++.+.++.|+.+. ..+.|.++++.... .
T Consensus 308 ~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (425)
T 1r5m_A 308 MDGSVRLWSLKQNTLLALSI-VDGVPIFAGRISQDGQKYAVAF-MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLY 385 (425)
T ss_dssp TTSEEEEEETTTTEEEEEEE-CTTCCEEEEEECTTSSEEEEEE-TTSCEEEEECHHHHC--------------CEECCEE
T ss_pred CCCcEEEEECCCCcEeEecc-cCCccEEEEEEcCCCCEEEEEE-CCCeEEEEECCCCccceeeeecccccccCcccchhh
Confidence 78899999987543333222 3345678899998777666554 45689999997433 2
Q ss_pred EEEecCCC--CceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCC
Q psy5806 1124 KILVNDLM--EPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDG 1168 (1332)
Q Consensus 1124 ~~~~~~~~--~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG 1168 (1332)
..+..... .+..++++|...+|+.+... +.|...++.|
T Consensus 386 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------g~i~iw~~~g 425 (425)
T 1r5m_A 386 ASYQSSQDNDYIFDLSWNCAGNKISVAYSL-------QEGSVVAIPG 425 (425)
T ss_dssp EEECCTTCCCCEEEEEECTTSSEEEEEESS-------SCCEEEECCC
T ss_pred hhhcCcccCCceEEEEccCCCceEEEEecC-------ceEEEEeecC
Confidence 22433323 78899999976666655432 3455555554
No 214
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.0063 Score=71.53 Aligned_cols=230 Identities=10% Similarity=-0.025 Sum_probs=139.4
Q ss_pred EEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCC---CCceeEeecCCCCceeeEEEecC
Q psy5806 1024 IRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDS---TRIKPIPLMNDTIRDNFVIDWVA 1100 (1332)
Q Consensus 1024 i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g---~~~~~i~~~~~~~p~glAvDw~~ 1100 (1332)
|+..++...........+..-..+..++|++.++.|+... ..+.|+..++... ......+......+..|++.+.+
T Consensus 47 v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 125 (416)
T 2pm9_A 47 LELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGAL-DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQ 125 (416)
T ss_dssp CEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEE-SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSS
T ss_pred EEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEc-cCCeEEEeecccccccccchhhccCCccceEEEEEcCCC
Confidence 5555655432211222223334578999999888776665 5778888887641 11222222234467889998774
Q ss_pred CeEEEEcCCCceEEEEeeCCce------EEE-E---ecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCc
Q psy5806 1101 NNIYYIDSQMHTINVARSDGQH------KKI-L---VNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSY 1170 (1332)
Q Consensus 1101 ~~LY~td~~~~~I~v~~ldG~~------~~~-~---~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~ 1170 (1332)
++++++-...+.|.++++.... ... + .........|+++|..+.++.+.... +.|...++....
T Consensus 126 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~v~iwd~~~~~ 199 (416)
T 2pm9_A 126 DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS------NFASIWDLKAKK 199 (416)
T ss_dssp TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS------SCEEEEETTTTE
T ss_pred CCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC------CCEEEEECCCCC
Confidence 5566666667789999997543 111 2 22335678999999756666665433 568888887655
Q ss_pred eEEEEecC------CCCcceEEEecCCCEEEEEEcCCC---eEEEEecCCC--ceEEEE-e-ecccceEEEecCCccccc
Q psy5806 1171 RTVLVEED------LAFPNELAIDFKQRRLFWADSTNK---RIEYCDFFGR--SRKIVI-S-KVAPYGLSVRQSPGKAFI 1237 (1332)
Q Consensus 1171 ~~~l~~~~------l~~p~glaiD~~~~~LY~~d~~~~---~I~~~d~dG~--~~~~~~-~-~~~P~glav~~~~~~~~~ 1237 (1332)
....+... -.....+++.++++.++++-...+ .|...|+... ....+. . ...+.+|++ .+.+
T Consensus 200 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~-----s~~~ 274 (416)
T 2pm9_A 200 EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDW-----CHQD 274 (416)
T ss_dssp EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEE-----CSSC
T ss_pred cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEe-----CCCC
Confidence 44444322 345778999988765665555665 8888888743 223332 2 445567777 2214
Q ss_pred cEEEEEECCCCEEEEEEecCCCCcceEEEEe
Q psy5806 1238 VELYWTDWEAMSVVIAREKSDTGQWDVHLIR 1268 (1332)
Q Consensus 1238 ~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~ 1268 (1332)
+.++++-...+.|...+..++ .....+.
T Consensus 275 ~~~l~s~~~dg~v~~wd~~~~---~~~~~~~ 302 (416)
T 2pm9_A 275 EHLLLSSGRDNTVLLWNPESA---EQLSQFP 302 (416)
T ss_dssp SSCEEEEESSSEEEEECSSSC---CEEEEEE
T ss_pred CCeEEEEeCCCCEEEeeCCCC---ccceeec
Confidence 445555556778888887766 4444444
No 215
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.41 E-value=0.0097 Score=69.12 Aligned_cols=199 Identities=9% Similarity=-0.044 Sum_probs=129.3
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKK 1124 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~ 1124 (1332)
.+.+++|.+.++.|.... ..+.|+..++..+.....+ ......+..|++.+.++.++++....+.|.++++. ++...
T Consensus 141 ~V~~v~~spdg~~l~sgs-~dg~v~iwd~~~~~~~~~~-~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~ 218 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGG-KDFSVKVWDLSQKAVLKSY-NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT 218 (357)
T ss_dssp CEEEEEECSSSSEEEEEE-TTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC
T ss_pred CEEEEEECCCCCEEEEEe-CCCeEEEEECCCCcEEEEE-cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceee
Confidence 467999999888776554 6788998897744322222 22344678899987777777877777889999886 33332
Q ss_pred EE--ecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCC
Q psy5806 1125 IL--VNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNK 1202 (1332)
Q Consensus 1125 ~~--~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~ 1202 (1332)
.+ ......+..|+++|..+.++.+-... ..|...++........+...-.....|++.++++++..+-...+
T Consensus 219 ~~~~~~~~~~v~~v~~sp~~~~~la~g~~d------~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~ 292 (357)
T 4g56_B 219 RIDFCASDTIPTSVTWHPEKDDTFACGDET------GNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDC 292 (357)
T ss_dssp BCCCTTCCSCEEEEEECTTSTTEEEEEESS------SCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTS
T ss_pred eeeeccccccccchhhhhcccceEEEeecc------cceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCC
Confidence 22 12234578999999888777765433 46777777554443334333355678899888777666656678
Q ss_pred eEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecC
Q psy5806 1203 RIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKS 1257 (1332)
Q Consensus 1203 ~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~ 1257 (1332)
.|...|++......... .....+|++ .+.++.++.+-...++|...+..+
T Consensus 293 ~i~iwd~~~~~~~~~~~H~~~V~~vaf-----sP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 293 TVAVLDADFSEVFRDLSHRDFVTGVAW-----SPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp CEEEECTTSCEEEEECCCSSCEEEEEE-----CSSSTTEEEEEETTSCEEEEECC-
T ss_pred EEEEEECCCCcEeEECCCCCCEEEEEE-----eCCCCCEEEEEcCCCeEEEEECCC
Confidence 89988887543222222 445677887 223455566666778888887644
No 216
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.39 E-value=5.7e-05 Score=61.50 Aligned_cols=41 Identities=34% Similarity=0.780 Sum_probs=35.9
Q ss_pred CCcccCC--------CCCCccccccCCCCccccCCCCeeEccCCccccc
Q psy5806 969 PNACGSN--------NGGCSHLCLRNPTNFTCACPTGILLSADRRSCFS 1009 (1332)
Q Consensus 969 ~n~C~~~--------nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~ 1009 (1332)
.++|... ++.|+|.|.+++++|+|.|+.||.|..|+++|.+
T Consensus 4 idEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 4 LDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp CCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred cccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCccCC
Confidence 4677654 4789999999999999999999999999999973
No 217
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.36 E-value=0.0041 Score=72.66 Aligned_cols=200 Identities=8% Similarity=-0.082 Sum_probs=113.3
Q ss_pred EEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCC-CCcee--e----------------EEEecCCeEEEEc---
Q psy5806 1050 FDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMND-TIRDN--F----------------VIDWVANNIYYID--- 1107 (1332)
Q Consensus 1050 id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~-~~p~g--l----------------AvDw~~~~LY~td--- 1107 (1332)
+.+++.+++|+++.. .+.|+.+++.++. ...+..... ..|.| | ++.+.++.|++..
T Consensus 86 ~~~spdg~~l~~~~~-~~~l~~~d~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~ 163 (396)
T 3c5m_A 86 GFISTDERAFFYVKN-ELNLMKVDLETLE-EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYH 163 (396)
T ss_dssp CEECTTSSEEEEEET-TTEEEEEETTTCC-EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHH
T ss_pred ceECCCCCEEEEEEc-CCcEEEEECCCCC-cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeecc
Confidence 567888888988763 4478888877433 333332111 12222 1 1122233333332
Q ss_pred -CCCceEEEEeeCCceEEEEecCCCCceEEEEcC-CCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecC-CCCcce
Q psy5806 1108 -SQMHTINVARSDGQHKKILVNDLMEPLAIAVYP-RRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEED-LAFPNE 1184 (1332)
Q Consensus 1108 -~~~~~I~v~~ldG~~~~~~~~~~~~P~~iavdp-~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~-l~~p~g 1184 (1332)
.....|.++++++.....+.........++++| ..++|+++..+.. .....+|+.++++|.....+.... ...+..
T Consensus 164 ~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~-~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 242 (396)
T 3c5m_A 164 TNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPH-DLVDARMWLVNEDGSNVRKIKEHAEGESCTH 242 (396)
T ss_dssp TCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCS-SSCSCCCEEEETTSCCCEESSCCCTTEEEEE
T ss_pred CCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCC-CCCCceEEEEECCCCceeEeeccCCCccccc
Confidence 345578888887544444334445678899999 5666777653320 111257999999887755554421 123556
Q ss_pred EEEecCCCEEEEEEc--CCCe--EEEEecCCCceEEEEeecccceEEEecCCccc-cccEEEEEE---------------
Q psy5806 1185 LAIDFKQRRLFWADS--TNKR--IEYCDFFGRSRKIVISKVAPYGLSVRQSPGKA-FIVELYWTD--------------- 1244 (1332)
Q Consensus 1185 laiD~~~~~LY~~d~--~~~~--I~~~d~dG~~~~~~~~~~~P~glav~~~~~~~-~~~~lYwtd--------------- 1244 (1332)
+++.+++++|+++.. .... |...|+++...+.+..... ..++. .+ .+..|+.+.
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~~~~-----s~~dg~~l~~~~~~~p~~~~~~~~~~~ 316 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CSHLM-----SNFDGSLMVGDGCDAPVDVADADSYNI 316 (396)
T ss_dssp EEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EEEEE-----ECSSSSEEEEEECCC----------CC
T ss_pred eEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CCCCc-----cCCCCceEEEecCCcceeecccccccc
Confidence 789999988877743 2334 9999997665544443111 11444 12 333444432
Q ss_pred CCCCEEEEEEecCC
Q psy5806 1245 WEAMSVVIAREKSD 1258 (1332)
Q Consensus 1245 ~~~~~V~~~~~~~g 1258 (1332)
.....|++++..++
T Consensus 317 ~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 317 ENDPFLYVLNTKAK 330 (396)
T ss_dssp CCCCEEEEEETTTT
T ss_pred CCCCcEEEEecccC
Confidence 13478888888776
No 218
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.33 E-value=0.019 Score=68.39 Aligned_cols=201 Identities=6% Similarity=0.015 Sum_probs=135.9
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCce------eEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIK------PIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD 1119 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~------~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld 1119 (1332)
.+.+++|++.+..++++-...+.|...++..+.... .........+..+++.+.+++++++....+.|.++++.
T Consensus 183 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~ 262 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR 262 (430)
T ss_dssp CCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 457899998877455555578899999987533211 11212334578899987778888888888999999997
Q ss_pred Cc----eEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCC-CceEEEEecCCCCcceEEEecCCCEE
Q psy5806 1120 GQ----HKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDG-SYRTVLVEEDLAFPNELAIDFKQRRL 1194 (1332)
Q Consensus 1120 G~----~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG-~~~~~l~~~~l~~p~glaiD~~~~~L 1194 (1332)
.. ....+......++.|+++|...+++.+.... +.|...++.. ......+...-.....|++.++++.+
T Consensus 263 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d------g~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~ 336 (430)
T 2xyi_A 263 NNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD------KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETI 336 (430)
T ss_dssp CSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT------SEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTE
T ss_pred CCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC------CeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCE
Confidence 43 2333433445789999999777777776544 5688888765 33333333334567789999988888
Q ss_pred EEEEcCCCeEEEEecCCCc------------eEEEEe----ecccceEEEecCCccccccEEEEEECCCCEEEEEEecC
Q psy5806 1195 FWADSTNKRIEYCDFFGRS------------RKIVIS----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKS 1257 (1332)
Q Consensus 1195 Y~~d~~~~~I~~~d~dG~~------------~~~~~~----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~ 1257 (1332)
+.+-...+.|...|+.... .+.+.. ...+..+++ .+.+.+++++-...+.|...+...
T Consensus 337 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-----~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 337 LASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW-----NPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEE-----CSSSTTEEEEEETTSEEEEEEECH
T ss_pred EEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEE-----CCCCCCEEEEEECCCCEEEeEccc
Confidence 8888888899998886411 122222 455788888 233444777777888887777643
No 219
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.31 E-value=0.025 Score=65.77 Aligned_cols=198 Identities=10% Similarity=0.031 Sum_probs=129.8
Q ss_pred ceEEEEEeCCC-cEEEEEeCCCCeEEEEECCCCCCceeEee-cCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceE
Q psy5806 1046 SSIFFDYHYSK-NLIYFADMRSGNLRTFDMSDSTRIKPIPL-MNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHK 1123 (1332)
Q Consensus 1046 ~~~~id~d~~~-~~lY~sd~~~~~I~~~~l~~g~~~~~i~~-~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~ 1123 (1332)
.+..++|++.+ +.|+.. ...+.|+..++.++.....+.. .....+.+|++.+..+++.++-...+.|.++++.+...
T Consensus 75 ~v~~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 153 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVG-SKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVI 153 (383)
T ss_dssp CEEEEEECSSCTTEEEEE-EBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEE
T ss_pred CEEEEEECCCCCCEEEEE-cCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCce
Confidence 46789999987 555554 4678899999875443333321 13346778888764445555555677999999998665
Q ss_pred EEEecCC---CCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcC
Q psy5806 1124 KILVNDL---MEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADST 1200 (1332)
Q Consensus 1124 ~~~~~~~---~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~ 1200 (1332)
..+.... .....++++|...+|+..... +.|...++.+.....+.. .-.....+++.++++.++++-..
T Consensus 154 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~ 225 (383)
T 3ei3_B 154 QVFAKTDSWDYWYCCVDVSVSRQMLATGDST-------GRLLLLGLDGHEIFKEKL-HKAKVTHAEFNPRCDWLMATSSV 225 (383)
T ss_dssp EEEECCCCSSCCEEEEEEETTTTEEEEEETT-------SEEEEEETTSCEEEEEEC-SSSCEEEEEECSSCTTEEEEEET
T ss_pred EEEeccCCCCCCeEEEEECCCCCEEEEECCC-------CCEEEEECCCCEEEEecc-CCCcEEEEEECCCCCCEEEEEeC
Confidence 5543322 457899999966666555432 578888887765544433 34667889999888745556567
Q ss_pred CCeEEEEecCC-C---ceEEEEe-ecccceEEEecCCccc-cccEEEEEECCCCEEEEEEecCC
Q psy5806 1201 NKRIEYCDFFG-R---SRKIVIS-KVAPYGLSVRQSPGKA-FIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1201 ~~~I~~~d~dG-~---~~~~~~~-~~~P~glav~~~~~~~-~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.+.|...|+.. . ....... .....+|++ .+ .+.+|+ +-...+.|...+..++
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-----s~~~~~~l~-~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 226 DATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYF-----NPTDSTKLL-TTDQRNEIRVYSSYDW 283 (383)
T ss_dssp TSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEE-----CTTTSCEEE-EEESSSEEEEEETTBT
T ss_pred CCEEEEEeCCCCCcccceEEEecCCCceEEEEE-----cCCCCCEEE-EEcCCCcEEEEECCCC
Confidence 78999999863 2 1111123 556678888 33 334444 4456789999998877
No 220
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.26 E-value=0.0059 Score=77.26 Aligned_cols=164 Identities=9% Similarity=0.049 Sum_probs=106.2
Q ss_pred CCCcE-EEEEeCCCCeEEEEECCC-C-CCceeEeec----CCCCceeeEEEecCCeEEEEcCC---------CceEEEEe
Q psy5806 1054 YSKNL-IYFADMRSGNLRTFDMSD-S-TRIKPIPLM----NDTIRDNFVIDWVANNIYYIDSQ---------MHTINVAR 1117 (1332)
Q Consensus 1054 ~~~~~-lY~sd~~~~~I~~~~l~~-g-~~~~~i~~~----~~~~p~glAvDw~~~~LY~td~~---------~~~I~v~~ 1117 (1332)
|.+++ |+++......|+.++++. | .....+... ....+.++++++.++.|+++... ...|.+++
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEE
Confidence 67777 888876677888888640 1 222232211 12356788999999999887543 25788899
Q ss_pred eCC------ceEEEEe-cCCCCceEEEEcCCCcEEEEEecCCCCC-CCCCcEEEEecCC-C---ceEEEEecCCCCcceE
Q psy5806 1118 SDG------QHKKILV-NDLMEPLAIAVYPRRGLLFYSHWGLYDN-SPTTKIEKVYLDG-S---YRTVLVEEDLAFPNEL 1185 (1332)
Q Consensus 1118 ldG------~~~~~~~-~~~~~P~~iavdp~~g~Lywtd~~~~~~-~~~~~I~r~~ldG-~---~~~~l~~~~l~~p~gl 1185 (1332)
+++ ...+.+. .+.....+++++|...+|+|+.+..... -....|+..++++ . ....+....-..+..+
T Consensus 168 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~ 247 (662)
T 3azo_A 168 LDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQA 247 (662)
T ss_dssp TTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEE
T ss_pred CCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcce
Confidence 988 5555554 4445567789999888899987543000 0125799999984 3 3344443223566778
Q ss_pred EEecCCCEEEEEEcCCC--eEEEEecCCCceEEEE
Q psy5806 1186 AIDFKQRRLFWADSTNK--RIEYCDFFGRSRKIVI 1218 (1332)
Q Consensus 1186 aiD~~~~~LY~~d~~~~--~I~~~d~dG~~~~~~~ 1218 (1332)
++.++++ ||++....+ +|+++++++...+.+.
T Consensus 248 ~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~ 281 (662)
T 3azo_A 248 EWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLC 281 (662)
T ss_dssp EECTTSC-EEEEECTTSSCEEEEECTTTCCEEESS
T ss_pred EECCCCe-EEEEECCCCCeEEEEEECCCCceeecc
Confidence 8988888 666654445 8999998665544443
No 221
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.26 E-value=0.97 Score=58.26 Aligned_cols=465 Identities=8% Similarity=0.006 Sum_probs=225.2
Q ss_pred CccceEeeccceeEEEecCCCCCcceeeec-----c--cccceeEEeecCCCceEEEEecCCCceEEEecCCCCceEEEe
Q psy5806 706 PSKFLLVSQTDKIRQISLDVEYRYPIVLPL-----R--QLKMVASVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVV 778 (1332)
Q Consensus 706 ~~~~ll~s~~~~i~~i~l~~~~~~~~~~~~-----~--~~~~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~ 778 (1332)
..-||.+++...|.+.+-.. . ..... . .-..+.+|..|.. +.|++... +.+.+.+........+..
T Consensus 52 ~~G~lWigT~~GL~ryDG~~--f--~~~~~~~~~~~~l~~n~I~~i~~d~~-g~lWigT~--~Gl~~yd~~~~~f~~~~~ 124 (795)
T 4a2l_A 52 KRGNMWFATYDGVNKYDGYA--F--TVYQHNEDDPNSIANDISRIVKTDSQ-GRVWIGTR--DGLSRYDEEKDIFQNFFY 124 (795)
T ss_dssp TTSCEEEEETTEEEEECSSC--E--EEECCCTTCTTSCSCSCEEEEEECTT-SCEEEEES--SCEEEEETTTTEEEEECC
T ss_pred CCCCEEEeecCcCcccCCCc--e--EEEeCCCCCCCcccccceeEEEECCC-CCEEEEeC--CchheeCCCCCeEEeccc
Confidence 44567777777776654321 0 01100 0 1134566766754 67777643 347777654322222211
Q ss_pred CCC---CCccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEecCC--CC-CeEEEEeCCCCeEEEEecccCcCCCC
Q psy5806 779 NDL---NRTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFWLNL--YR-PRSIVVHYGLGLMVWADWSRTRLTNN 852 (1332)
Q Consensus 779 ~~~---~~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~~~--~~-P~~Iavdp~~g~lywtd~g~~~~~~~ 852 (1332)
... ..+..|+.|. .++||+... +.|.+.+........+ ...+ .. ...|..|+. |.|++...+.
T Consensus 125 ~~~~~~~~i~~i~~d~-~g~lwi~t~--~gl~~~~~~~~~~~~~-~~~~~~~~~i~~i~~d~~-g~lwigt~~~------ 193 (795)
T 4a2l_A 125 EKNGKHLQVNGIEEIS-PEQLLISTP--EGLIMFDIKESKFIDD-SFSTAMHKTIASTLYRQG-DQIYIGTSTD------ 193 (795)
T ss_dssp EETTEECCCCEEEEEE-TTEEEEEET--TEEEEEETTTTEEECS-SSCHHHHTCCEEEEEEET-TEEEEEESSS------
T ss_pred cccCCCceEEEEEECC-CCCEEEEEC--CceEEEECCCCEEEec-cCCCCCCcceEEEEECCC-CCEEEEECCC------
Confidence 000 1166788884 455777654 4576666543221111 1111 12 678888865 7877754321
Q ss_pred ceEEEecCCCCcEEEecc--cccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEecc------C--CcceEEEE
Q psy5806 853 RIEMAHMDGTNRAVFETE--VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYAV------Q--SHPYTLTV 922 (1332)
Q Consensus 853 ~I~r~~~dG~~~~~l~~~--l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~~------~--~~P~~la~ 922 (1332)
.|.+..........+... ......|..|..+ +|+++.. .+-|...+......+.+... + ....+|..
T Consensus 194 Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g--~lwigt~-~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~ 270 (795)
T 4a2l_A 194 GLYTYSITQKTFEKVIPILGTKQIQAILQQSPT--RIWVATE-GAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAM 270 (795)
T ss_dssp CEEEEETTTCCEEECC----CCCEEEEEEEETT--EEEEEEB-SSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEE
T ss_pred CEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCC--CEEEEEC-CCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEE
Confidence 366666544332222111 2234467777755 5555442 23466776655444333221 1 22456666
Q ss_pred eCCEEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEcc
Q psy5806 923 LDYYVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSA 1002 (1332)
Q Consensus 923 ~~~~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~ 1002 (1332)
+.+-..|.-... .|.+.++.+++... +.. .+. ++=...+ ..- +.+..
T Consensus 271 d~~g~lWigt~~-Gl~~~~~~~~~~~~----------~~~-~~~---~~~~l~~-----------~~i-------~~i~~ 317 (795)
T 4a2l_A 271 DSQNRLWIGTFN-DLNIYHEGTDSFAS----------YSS-NPV---ENGSLSQ-----------RSV-------RSIFM 317 (795)
T ss_dssp CTTSCEEEEESS-CEEEEETTTTEEEE----------ECC-CTT---STTSCSS-----------SCE-------EEEEE
T ss_pred cCCCCEEEEeCC-hhheEcCCCCeEEE----------Eec-CCC---CCCCCCC-----------CcE-------EEEEE
Confidence 633334433233 46666665542111 100 000 0000000 000 01111
Q ss_pred CCccccccCcceEEEEee-cceEEEEeCCCCCCCCcc-cc-cCC--ccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCC
Q psy5806 1003 DRRSCFSRTREFLLYTSR-FGVIRRISLDTADLLPVT-LP-FPE--YMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDS 1077 (1332)
Q Consensus 1003 d~~tC~~~p~~~ll~~~~-~~~i~~i~l~~~~~~~~~-~p-i~~--~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g 1077 (1332)
| ++..|-+.+. .. |..++.......... .+ -.+ ...+.+|..|.. +.||+.. ..+-|.+++...+
T Consensus 318 D-------~~g~lWigt~~~G-l~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~-g~lWiGt-~~~Gl~~~~~~~~ 387 (795)
T 4a2l_A 318 D-------SQGGMWLGTYFGG-LNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKD-KNLWIGT-NDGGLNLYNPITQ 387 (795)
T ss_dssp C-------TTSCEEEEESSSC-EEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTT-SCEEEEE-SSSCEEEECTTTC
T ss_pred e-------CCcCEEEEECCCC-eEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCC-CCEEEEE-CCCCeEEEcCCCC
Confidence 1 1122323332 33 444433211100000 00 011 224678877865 4577664 4445888775422
Q ss_pred CCceeEeec--------CCCCceeeEEEecCCe-EEEEcCCCceEEEEeeCCceEEEEec-----CCCCceEEEEcCCCc
Q psy5806 1078 TRIKPIPLM--------NDTIRDNFVIDWVANN-IYYIDSQMHTINVARSDGQHKKILVN-----DLMEPLAIAVYPRRG 1143 (1332)
Q Consensus 1078 ~~~~~i~~~--------~~~~p~glAvDw~~~~-LY~td~~~~~I~v~~ldG~~~~~~~~-----~~~~P~~iavdp~~g 1143 (1332)
. ...+... ....+..|+.|. .++ ||+... .+.|.+++.+....+.+.. ....+++|+.|+ .|
T Consensus 388 ~-~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~-~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g 463 (795)
T 4a2l_A 388 R-FTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTH-AGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDG-EG 463 (795)
T ss_dssp C-EEEECCC------CCSCSCEEEEEEET-TTTEEEEEET-TTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECS-SS
T ss_pred c-EEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeC-cCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECC-CC
Confidence 2 1122111 123567888884 456 776644 3467777776433333321 124578999998 78
Q ss_pred EEEEEecCCCCCCCCCcEEEEecCCCceEEEEec----CC--CCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEE
Q psy5806 1144 LLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEE----DL--AFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIV 1217 (1332)
Q Consensus 1144 ~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~----~l--~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~ 1217 (1332)
.|+++..++ |.+.+......+.+... .+ .....|..| ..++||++.. +-|.+++.++... .+
T Consensus 464 ~lwigt~~G--------l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d-~~g~lWigt~--~Gl~~~~~~~~~~-~~ 531 (795)
T 4a2l_A 464 NLWLGTLSA--------LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRD-SHKRLWIGGE--EGLSVFKQEGLDI-QK 531 (795)
T ss_dssp CEEEEESSC--------EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEEC-TTCCEEEEES--SCEEEEEEETTEE-EE
T ss_pred CEEEEecCc--------eeEEeCCCCeEEEccccccccccCCceEEEEEEC-CCCCEEEEeC--CceEEEeCCCCeE-EE
Confidence 888876543 88888765443333221 11 345677788 4567888765 4588888765433 22
Q ss_pred E---e-----ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1218 I---S-----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1218 ~---~-----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
. . .....+|.. +.++.||++... .|+++++.++
T Consensus 532 ~~~~~~~~l~~~~i~~i~~------d~~g~lWigT~~--Gl~~~d~~~~ 572 (795)
T 4a2l_A 532 ASILPVSNVTKLFTNCIYE------ASNGIIWVGTRE--GFYCFNEKDK 572 (795)
T ss_dssp CCCSCSCGGGGSCEEEEEE------CTTSCEEEEESS--CEEEEETTTT
T ss_pred ecCCCCCCCCCCeeEEEEE------CCCCCEEEEeCC--CceeECCCCC
Confidence 1 1 223456666 456778877653 6888886554
No 222
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.25 E-value=0.024 Score=67.48 Aligned_cols=201 Identities=12% Similarity=-0.021 Sum_probs=135.6
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCC---------CCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDS---------TRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVA 1116 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g---------~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~ 1116 (1332)
.+..++|.+.++.++.+-...+.|+..++... ......+......+.+|++++.+..+.++....+.|.++
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 209 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLW 209 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEE
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEE
Confidence 35678889876667777667888998887631 111112222334567888887777466777777899999
Q ss_pred eeCCce--------EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCC---ceEEEEecCCCCcceE
Q psy5806 1117 RSDGQH--------KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGS---YRTVLVEEDLAFPNEL 1185 (1332)
Q Consensus 1117 ~ldG~~--------~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~---~~~~l~~~~l~~p~gl 1185 (1332)
++.... ...+..-...+..|+++|..+.++.+.... +.|...++... .....+...-..++.|
T Consensus 210 d~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 283 (430)
T 2xyi_A 210 DINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD------QKLMIWDTRNNNTSKPSHTVDAHTAEVNCL 283 (430)
T ss_dssp ETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT------SEEEEEETTCSCSSSCSEEEECCSSCEEEE
T ss_pred eCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC------CeEEEEECCCCCCCcceeEeecCCCCeEEE
Confidence 997511 112223334688999999778888887554 67888887654 2222333334567889
Q ss_pred EEecCCCEEEEEEcCCCeEEEEecCC-Cc-eEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecC
Q psy5806 1186 AIDFKQRRLFWADSTNKRIEYCDFFG-RS-RKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKS 1257 (1332)
Q Consensus 1186 aiD~~~~~LY~~d~~~~~I~~~d~dG-~~-~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~ 1257 (1332)
++.+.++.++++-...+.|...|+.. .. ...+.. .....+|++ .+.+.+++.+-...+.|...+...
T Consensus 284 ~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~-----sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 284 SFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW-----SPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEE-----CSSCTTEEEEEETTSCCEEEEGGG
T ss_pred EeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEE-----CCCCCCEEEEEeCCCcEEEEeCCC
Confidence 99988888888877889999999975 32 233332 556677888 334557888888888999888766
No 223
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.25 E-value=0.24 Score=57.34 Aligned_cols=188 Identities=11% Similarity=-0.037 Sum_probs=118.7
Q ss_pred ceEEEEeecceEEEEeCCCCCCCCccccc-CCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecC--CC
Q psy5806 1013 EFLLYTSRFGVIRRISLDTADLLPVTLPF-PEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMN--DT 1089 (1332)
Q Consensus 1013 ~~ll~~~~~~~i~~i~l~~~~~~~~~~pi-~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~--~~ 1089 (1332)
.+|+....+..|+..++....... .... .....+.+++|.+.++.++++-...+.|...++. +.....+.... ..
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~~~~~~~ 164 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQNKTS-FIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS-GSVIQVFAKTDSWDY 164 (383)
T ss_dssp TEEEEEEBTSCEEEEETTSTTCEE-EECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT-SCEEEEEECCCCSSC
T ss_pred CEEEEEcCCCeEEEEeCCCcccce-eeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC-CCceEEEeccCCCCC
Confidence 355555444327777776443221 1121 2334578999999555555555578899999987 43333333211 13
Q ss_pred CceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCC-
Q psy5806 1090 IRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDG- 1168 (1332)
Q Consensus 1090 ~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG- 1168 (1332)
.+..+++.+.++.|+.+. ..+.|.+++++++....+..-.....+|+++|....++.+-... +.|...++..
T Consensus 165 ~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~ 237 (383)
T 3ei3_B 165 WYCCVDVSVSRQMLATGD-STGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVD------ATVKLWDLRNI 237 (383)
T ss_dssp CEEEEEEETTTTEEEEEE-TTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETT------SEEEEEEGGGC
T ss_pred CeEEEEECCCCCEEEEEC-CCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCC------CEEEEEeCCCC
Confidence 578899998777776554 45799999998877666655556789999999766355554333 4577667653
Q ss_pred ---CceEEEEecCCCCcceEEEec-CCCEEEEEEcCCCeEEEEecCC
Q psy5806 1169 ---SYRTVLVEEDLAFPNELAIDF-KQRRLFWADSTNKRIEYCDFFG 1211 (1332)
Q Consensus 1169 ---~~~~~l~~~~l~~p~glaiD~-~~~~LY~~d~~~~~I~~~d~dG 1211 (1332)
........ .-.....+++++ +++.|+.+ ...+.|...|+..
T Consensus 238 ~~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~~~-~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 238 KDKNSYIAEMP-HEKPVNAAYFNPTDSTKLLTT-DQRNEIRVYSSYD 282 (383)
T ss_dssp CSTTCEEEEEE-CSSCEEEEEECTTTSCEEEEE-ESSSEEEEEETTB
T ss_pred CcccceEEEec-CCCceEEEEEcCCCCCEEEEE-cCCCcEEEEECCC
Confidence 22222222 345677899998 76666655 4678999999863
No 224
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.23 E-value=1 Score=57.94 Aligned_cols=189 Identities=10% Similarity=0.004 Sum_probs=111.2
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEee--cCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCc-e
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPL--MNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQ-H 1122 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~--~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~-~ 1122 (1332)
.+.+|..|.. +.||+.. ..+-|.+++..++ ..+.+.. .....+..|+.|. .++||++.. +.|.+++.+.. .
T Consensus 408 ~v~~i~~d~~-g~lWigt-~~~Gl~~~~~~~~-~~~~~~~~~~~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 408 SVLCSLKDSE-GNLWFGT-YLGNISYYNTRLK-KFQIIELEKNELLDVRVFYEDK-NKKIWIGTH--AGVFVIDLASKKV 481 (781)
T ss_dssp BEEEEEECTT-SCEEEEE-TTEEEEEECSSSC-EEEECCSTTTCCCCEEEEEECT-TSEEEEEET--TEEEEEESSSSSC
T ss_pred ceEEEEECCC-CCEEEEe-ccCCEEEEcCCCC-cEEEeccCCCCCCeEEEEEECC-CCCEEEEEC--CceEEEeCCCCeE
Confidence 4678877755 4577654 4456888874422 1111111 1223567888884 677877765 46777777643 3
Q ss_pred EEEEecC-----CCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEec-CC--CCcceEEEecCCCEE
Q psy5806 1123 KKILVND-----LMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEE-DL--AFPNELAIDFKQRRL 1194 (1332)
Q Consensus 1123 ~~~~~~~-----~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~-~l--~~p~glaiD~~~~~L 1194 (1332)
....... ...+++|+.|+ .|.|+++..+. -|.+.+.++...+.+... ++ .....|..|. .++|
T Consensus 482 ~~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~~-------Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~l 552 (781)
T 3v9f_A 482 IHHYDTSNSQLLENFVRSIAQDS-EGRFWIGTFGG-------GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSS-KGQM 552 (781)
T ss_dssp CEEECTTTSSCSCSCEEEEEECT-TCCEEEEESSS-------CEEEECTTCCEEEEECTTTTCSCSCEEEEEECT-TSCE
T ss_pred EecccCcccccccceeEEEEEcC-CCCEEEEEcCC-------CEEEEeCCCCeEEEccCCCCCCCCeeEEEEECC-CCCE
Confidence 2222111 24678999998 78888876532 388888776554433221 12 2345677774 5678
Q ss_pred EEEEcCCCeEEEEecCCCceEEEEe-----ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1195 FWADSTNKRIEYCDFFGRSRKIVIS-----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1195 Y~~d~~~~~I~~~d~dG~~~~~~~~-----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
|++.. .+-|.++|.....-+.+-. .....+|+. +.++.||++- .+.|.++++.++
T Consensus 553 Wi~T~-~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~------d~~g~lW~~t--~~Gl~~~~~~~~ 612 (781)
T 3v9f_A 553 WLATG-EGLVCFPSARNFDYQVFQRKEGLPNTHIRAISE------DKNGNIWAST--NTGISCYITSKK 612 (781)
T ss_dssp EEEET-TEEEEESCTTTCCCEEECGGGTCSCCCCCEEEE------CSSSCEEEEC--SSCEEEEETTTT
T ss_pred EEEEC-CCceEEECCCCCcEEEccccCCCCCceEEEEEE------CCCCCEEEEc--CCceEEEECCCC
Confidence 77765 4444887776544333322 234567877 4577888875 345777776544
No 225
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.22 E-value=0.11 Score=62.18 Aligned_cols=197 Identities=10% Similarity=-0.057 Sum_probs=125.0
Q ss_pred cceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCce-e--EeecCCCCceeeEEEec---CCeEEEEcCCCceEEEEee
Q psy5806 1045 MSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIK-P--IPLMNDTIRDNFVIDWV---ANNIYYIDSQMHTINVARS 1118 (1332)
Q Consensus 1045 ~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~-~--i~~~~~~~p~glAvDw~---~~~LY~td~~~~~I~v~~l 1118 (1332)
..+.+++|++.++.|+.++ ..+.|+.+++.++.... . .+......+..|++.+. ++.|+ +-...+.|.++++
T Consensus 150 ~~v~~~~~sp~~~~l~~~~-~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~-s~~~d~~i~vwd~ 227 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIAD-KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFII-TSDRDEHIKISHY 227 (450)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEE-EEETTSCEEEEEE
T ss_pred CCceEEEEcCCCCEEEEEe-CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEE-EEcCCCcEEEEEC
Confidence 3467999999999888887 57889999987554332 0 11123456788999986 44554 4445678999999
Q ss_pred C-CceEEEEe-cCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEec-------------------
Q psy5806 1119 D-GQHKKILV-NDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEE------------------- 1177 (1332)
Q Consensus 1119 d-G~~~~~~~-~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~------------------- 1177 (1332)
. +.....+. .-...+..|+++ ...+|+... .. ..|...++........+..
T Consensus 228 ~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~-~d------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (450)
T 2vdu_B 228 PQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAG-GD------DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQ 299 (450)
T ss_dssp SCTTCEEEECCCCSSCEEEEEEC-STTEEEEEE-SS------SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-----
T ss_pred CCCceeeeeecCCCCceEEEEEC-CCCEEEEEe-CC------CeEEEEECCCCcEeeeecchhhhhhhhhhccccccccc
Confidence 7 44444432 333567899998 455555443 32 5677777765443333321
Q ss_pred ------CCCCcceEEEecCCCEEEEEEcCCCeEEEEec--CCC-ceEEEEe---ecccceEEEecCCccccccEEEEEEC
Q psy5806 1178 ------DLAFPNELAIDFKQRRLFWADSTNKRIEYCDF--FGR-SRKIVIS---KVAPYGLSVRQSPGKAFIVELYWTDW 1245 (1332)
Q Consensus 1178 ------~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~--dG~-~~~~~~~---~~~P~glav~~~~~~~~~~~lYwtd~ 1245 (1332)
.-....+|++.++++.||.+....+.|...++ ... ..+.+.. ...+.++++ ..+.+|++-.
T Consensus 300 ~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~-------~~~~~~v~~~ 372 (450)
T 2vdu_B 300 NENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSA-------HNDEFQVTLD 372 (450)
T ss_dssp -----CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEE-------ETTEEEEEEC
T ss_pred ccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEe-------cCCcEEEEEe
Confidence 01235578888889999998767888998888 322 2222222 466788999 4455666643
Q ss_pred CC-------C--EEEEEEecCC
Q psy5806 1246 EA-------M--SVVIAREKSD 1258 (1332)
Q Consensus 1246 ~~-------~--~V~~~~~~~g 1258 (1332)
.. + .|+.++..++
T Consensus 373 ~~~~~~~~~~~i~v~~~~~~~~ 394 (450)
T 2vdu_B 373 NKESSGVQKNFAKFIEYNLNEN 394 (450)
T ss_dssp CTTCCSSCCCSEEEEEEETTTT
T ss_pred cccCCCCCCcceEEEEEEcCCC
Confidence 32 1 6777776555
No 226
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.20 E-value=0.0057 Score=76.15 Aligned_cols=193 Identities=8% Similarity=-0.020 Sum_probs=119.8
Q ss_pred eEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcC--C--CceEEEEee--CC
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDS--Q--MHTINVARS--DG 1120 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~--~--~~~I~v~~l--dG 1120 (1332)
+.++++++++++|.++....+++....++ +.....+..........+++.+. +.||+++. . ...|..+++ +|
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~-~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g 101 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYD-GGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPG 101 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEE-TTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTT
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEc-CCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCC
Confidence 57889999999999877556665555554 43333333222123455555544 67888875 2 235666777 77
Q ss_pred ceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcC
Q psy5806 1121 QHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADST 1200 (1332)
Q Consensus 1121 ~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~ 1200 (1332)
.... + .........++.|....++++.... ..+...++++...+.+.... . ..+++++++++|+++...
T Consensus 102 ~~~~-l-~~~~~~~~~~~s~dg~~~~~~s~~~------~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 102 EEQR-L-EAVKPMRILSGVDTGEAVVFTGATE------DRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp CCEE-C-TTSCSBEEEEEEECSSCEEEEEECS------SCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEE
T ss_pred cccc-c-cCCCCceeeeeCCCCCeEEEEecCC------CCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEc
Confidence 6553 2 2233455667777655555554332 22335577776666665432 2 688999999999976433
Q ss_pred ---CCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECCCC--EEEEEEecCC
Q psy5806 1201 ---NKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAM--SVVIAREKSD 1258 (1332)
Q Consensus 1201 ---~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~--~V~~~~~~~g 1258 (1332)
...|...|+++...+.+.. .....+++. ++++.+||.++ ..+ .|++++..++
T Consensus 171 ~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~-----SpDG~~l~~~~-~~~~~~i~~~d~~~~ 228 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSGGLRVFDSGEGSFSSASI-----SPGMKVTAGLE-TAREARLVTVDPRDG 228 (582)
T ss_dssp ETTEEEEEEEETTTCCCEEECCSSCEEEEEEE-----CTTSCEEEEEE-CSSCEEEEEECTTTC
T ss_pred CCCCeEEEEEcCCCCCceEeecCCCccccceE-----CCCCCEEEEcc-CCCeeEEEEEcCCCC
Confidence 2569999998766655554 444567777 45677788554 444 8999998776
No 227
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.19 E-value=0.0049 Score=76.75 Aligned_cols=191 Identities=9% Similarity=-0.077 Sum_probs=120.8
Q ss_pred ceEEEEEeCCCcEEEEEeC--C--CCeEEEEEC--CCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC
Q psy5806 1046 SSIFFDYHYSKNLIYFADM--R--SGNLRTFDM--SDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD 1119 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~--~--~~~I~~~~l--~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld 1119 (1332)
.+.+++|++. +.||+++. . ...|+.+++ . |... .+ ........+++.+.++.++++....+.+.+++++
T Consensus 66 ~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~-g~~~-~l--~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~ 140 (582)
T 3o4h_A 66 SVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRP-GEEQ-RL--EAVKPMRILSGVDTGEAVVFTGATEDRVALYALD 140 (582)
T ss_dssp EECEECTTCS-EEEEEEECSTTSCCEEEEEEETTST-TCCE-EC--TTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEE
T ss_pred ccccccCCCC-eEEEEeccCCCCcceEEEEEeccCC-Cccc-cc--cCCCCceeeeeCCCCCeEEEEecCCCCceEEEcc
Confidence 3557778877 78888885 1 226777886 4 3333 22 2222344567777788776665555555688998
Q ss_pred CceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEc
Q psy5806 1120 GQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADS 1199 (1332)
Q Consensus 1120 G~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~ 1199 (1332)
+...+.+..... .+++++|...+|+++.... .....|++.++++...+.|.. .......+++.++++.||.++.
T Consensus 141 ~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~---~~~~~i~~~d~~~g~~~~l~~-~~~~~~~~~~SpDG~~l~~~~~ 214 (582)
T 3o4h_A 141 GGGLRELARLPG--FGFVSDIRGDLIAGLGFFG---GGRVSLFTSNLSSGGLRVFDS-GEGSFSSASISPGMKVTAGLET 214 (582)
T ss_dssp TTEEEEEEEESS--CEEEEEEETTEEEEEEEEE---TTEEEEEEEETTTCCCEEECC-SSCEEEEEEECTTSCEEEEEEC
T ss_pred CCcEEEeecCCC--ceEEECCCCCEEEEEEEcC---CCCeEEEEEcCCCCCceEeec-CCCccccceECCCCCEEEEccC
Confidence 665544433222 8899999888888775432 112569999998777766543 3345578999999999995554
Q ss_pred CCC--eEEEEecCCCceEEEEe--ecccceEE--------EecCCccccccEEEEEECCCCEEEEEEe
Q psy5806 1200 TNK--RIEYCDFFGRSRKIVIS--KVAPYGLS--------VRQSPGKAFIVELYWTDWEAMSVVIARE 1255 (1332)
Q Consensus 1200 ~~~--~I~~~d~dG~~~~~~~~--~~~P~gla--------v~~~~~~~~~~~lYwtd~~~~~V~~~~~ 1255 (1332)
.+ .|...|+++...+ +.. ...+.+++ + ++++ .||++-...+++...+.
T Consensus 215 -~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----spdg-~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 215 -AREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGY-----LPDG-RLAVVARREGRSAVFID 274 (582)
T ss_dssp -SSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEE-----CTTS-CEEEEEEETTEEEEEET
T ss_pred -CCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeE-----cCCC-cEEEEEEcCCcEEEEEE
Confidence 44 8999999987766 443 23333344 5 2233 66666655566555543
No 228
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.18 E-value=1.1 Score=57.54 Aligned_cols=432 Identities=9% Similarity=-0.010 Sum_probs=212.6
Q ss_pred ceeEEeecCCCceEEEEecCCCceEEEecCCCCceEEEe-----CC--CCCccceeEecCCCeEEEEeCCCCeEEEEeCC
Q psy5806 740 MVASVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVV-----ND--LNRTESIAVDAIGRKIYWTDMNAQTIMVSDID 812 (1332)
Q Consensus 740 ~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~-----~~--~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ld 812 (1332)
.+.++..|. .+.||+.... +.|.+++......+.+.. .. -..+..|..|.. ++||+.... .+.+.+..
T Consensus 164 ~i~~i~~d~-~g~lwigt~~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~-g~lwigt~~--Gl~~~d~~ 238 (781)
T 3v9f_A 164 QTWTATEAE-DGKLYIGHVE-GGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTN-GNIWIGTSK--GLALFNAN 238 (781)
T ss_dssp CEEEEEEEE-TTEEEEEETT-TEEEEEETTTTEEEEECC--------CCSSEEEEEECTT-CCEEEEETT--EEEEEETT
T ss_pred ceEEEEECC-CCCEEEEecC-CCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCC-CCEEEEeCC--cHheECCC
Confidence 355666664 3677765433 347777665433322210 01 134667888854 457766543 57777664
Q ss_pred CCceEEEEec-------CCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEEec-------------cc-
Q psy5806 813 GKNAKVLFWL-------NLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVFET-------------EV- 871 (1332)
Q Consensus 813 G~~~~~l~~~-------~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l~~-------------~l- 871 (1332)
......+... .....++|+.|+. |.|++...+. -|.+.+.+......+.. .+
T Consensus 239 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~-g~lWigt~~~------Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~ 311 (781)
T 3v9f_A 239 TETFTNFHNNPGNIHGALSSYIFSIKQLKD-NKLWIATELN------GIMILDLQQNQFLLPEQIRFEFIREGDNNYSLS 311 (781)
T ss_dssp TTEEEC-----------CCCCEEEEEECTT-SEEEEEESSS------CEEEEETTCC---------CEEECBCSSTTSBS
T ss_pred CCcEEEEEcCCCccccccCceEEEEEECCC-CCEEEEeCCC------CeEEECCCCCeeeeeeccccccccCCCCCCCCC
Confidence 3322221110 1234678888865 7777665422 25555554432221111 11
Q ss_pred -ccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEe--------ccC--CcceEEEEeC-CEEEEEeCCCCEEEE
Q psy5806 872 -IWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAY--------AVQ--SHPYTLTVLD-YYVYWTDVQHSKIYR 939 (1332)
Q Consensus 872 -~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~--------~~~--~~P~~la~~~-~~iywtD~~~~~i~~ 939 (1332)
.....|..|..+ .| |+-...+-|..++......+.+. ..+ ....+++.+. +.||.. ...+.|.+
T Consensus 312 ~~~v~~i~~D~~g--~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWig-t~~~Gl~~ 387 (781)
T 3v9f_A 312 NASARYIFQDSFN--NI-WIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIG-TDGGGINV 387 (781)
T ss_dssp SSCEEEEEECSSC--CE-EEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEE-EBSSCEEE
T ss_pred CCeEEEEEEeCCC--CE-EEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEE-eCCCcEEE
Confidence 123467888766 55 44333455666666654444332 111 2345666664 444443 33344666
Q ss_pred EECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccccCcceEEEEe
Q psy5806 940 ANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTREFLLYTS 1019 (1332)
Q Consensus 940 ~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ll~~~ 1019 (1332)
.++.+++.. .+. .+.. . +... =+.+..| +...|.+.+
T Consensus 388 ~~~~~~~~~----------~~~--~~~~------~------------~~~~------v~~i~~d-------~~g~lWigt 424 (781)
T 3v9f_A 388 FENGKRVAI----------YNK--ENRE------L------------LSNS------VLCSLKD-------SEGNLWFGT 424 (781)
T ss_dssp EETTEEEEE----------CC-------------C------------CCSB------EEEEEEC-------TTSCEEEEE
T ss_pred EECCCCeEE----------Ecc--CCCC------C------------CCcc------eEEEEEC-------CCCCEEEEe
Confidence 554432100 000 0000 0 0000 0011111 122343444
Q ss_pred e-cceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecC-----CCCcee
Q psy5806 1020 R-FGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMN-----DTIRDN 1093 (1332)
Q Consensus 1020 ~-~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~-----~~~p~g 1093 (1332)
. .. +.+++...........+......+.+|..|.. +.||+... +-|.+++..++.- ..+.... ...+.+
T Consensus 425 ~~~G-l~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~-g~lwigt~--~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~ 499 (781)
T 3v9f_A 425 YLGN-ISYYNTRLKKFQIIELEKNELLDVRVFYEDKN-KKIWIGTH--AGVFVIDLASKKV-IHHYDTSNSQLLENFVRS 499 (781)
T ss_dssp TTEE-EEEECSSSCEEEECCSTTTCCCCEEEEEECTT-SEEEEEET--TEEEEEESSSSSC-CEEECTTTSSCSCSCEEE
T ss_pred ccCC-EEEEcCCCCcEEEeccCCCCCCeEEEEEECCC-CCEEEEEC--CceEEEeCCCCeE-EecccCcccccccceeEE
Confidence 3 34 55444332111100000011234667777754 56877754 5688888663322 2222111 235778
Q ss_pred eEEEecCCeEEEEcCCCceEEEEeeCCceEEEEec--CC--CCceEEEEcCCCcEEEEEecCCCCCCCCCcE-EEEecCC
Q psy5806 1094 FVIDWVANNIYYIDSQMHTINVARSDGQHKKILVN--DL--MEPLAIAVYPRRGLLFYSHWGLYDNSPTTKI-EKVYLDG 1168 (1332)
Q Consensus 1094 lAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~~~~--~~--~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I-~r~~ldG 1168 (1332)
|+.|. .++|+++.... .+.+++.++...+.+.. ++ ....+|+.|+ +|.|+++...+ | .+.+...
T Consensus 500 i~~d~-~g~lWigt~~~-Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi~T~~G--------lv~~~d~~~ 568 (781)
T 3v9f_A 500 IAQDS-EGRFWIGTFGG-GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSS-KGQMWLATGEG--------LVCFPSARN 568 (781)
T ss_dssp EEECT-TCCEEEEESSS-CEEEECTTCCEEEEECTTTTCSCSCEEEEEECT-TSCEEEEETTE--------EEEESCTTT
T ss_pred EEEcC-CCCEEEEEcCC-CEEEEeCCCCeEEEccCCCCCCCCeeEEEEECC-CCCEEEEECCC--------ceEEECCCC
Confidence 99994 67787776533 46666666544333321 22 3467899998 78888776533 5 7777655
Q ss_pred CceEEEEe-cCC--CCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe----ecc---cceEEEecCCcccccc
Q psy5806 1169 SYRTVLVE-EDL--AFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS----KVA---PYGLSVRQSPGKAFIV 1238 (1332)
Q Consensus 1169 ~~~~~l~~-~~l--~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~----~~~---P~glav~~~~~~~~~~ 1238 (1332)
...+.+-. .++ ....+|+.|. +++||++. .+-|.+++.+....+.+-. ... +.++.. +.+|
T Consensus 569 ~~~~~~~~~~gl~~~~i~~i~~d~-~g~lW~~t--~~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~------~~~G 639 (781)
T 3v9f_A 569 FDYQVFQRKEGLPNTHIRAISEDK-NGNIWAST--NTGISCYITSKKCFYTYDHSNNIPQGSFISGCVTK------DHNG 639 (781)
T ss_dssp CCCEEECGGGTCSCCCCCEEEECS-SSCEEEEC--SSCEEEEETTTTEEEEECGGGTCCSSCEEEEEEEE------CTTS
T ss_pred CcEEEccccCCCCCceEEEEEECC-CCCEEEEc--CCceEEEECCCCceEEecccCCccccccccCceEE------CCCC
Confidence 44433321 112 2355888884 56788774 3458888887544333322 111 235555 3578
Q ss_pred EEEEEECCCCEEEEEEecC
Q psy5806 1239 ELYWTDWEAMSVVIAREKS 1257 (1332)
Q Consensus 1239 ~lYwtd~~~~~V~~~~~~~ 1257 (1332)
.||+.-. +.+.++++..
T Consensus 640 ~l~~g~~--~Gl~~f~p~~ 656 (781)
T 3v9f_A 640 LIYFGSI--NGLCFFNPDI 656 (781)
T ss_dssp CEEEEET--TEEEEECSCC
T ss_pred EEEEECC--CceEEEChhh
Confidence 8999865 4677777643
No 229
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.18 E-value=0.099 Score=61.32 Aligned_cols=198 Identities=9% Similarity=-0.017 Sum_probs=130.3
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCc-eEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQ-HKK 1124 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~-~~~ 1124 (1332)
.+..++++. + ++++-...+.|...++..............+.+.++++.+.++.|+.+ ...+.|.++++... ...
T Consensus 178 ~v~~~~~~~--~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~~v~iwd~~~~~~~~ 253 (401)
T 4aez_A 178 RVGCLSWNR--H-VLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASG-GNDNVVQIWDARSSIPKF 253 (401)
T ss_dssp CEEEEEEET--T-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTCSSEEE
T ss_pred ceEEEEECC--C-EEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEE-eCCCeEEEccCCCCCccE
Confidence 456777853 3 444445788999999874333333333345577889998755555544 45678999999844 344
Q ss_pred EEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEc-CCCe
Q psy5806 1125 ILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADS-TNKR 1203 (1332)
Q Consensus 1125 ~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~-~~~~ 1203 (1332)
.+........+|+++|....|+.+..+. ..+.|...++........+... .....+++.++++.|+.+.. ..+.
T Consensus 254 ~~~~~~~~v~~~~~~p~~~~ll~~~~gs----~d~~i~i~d~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~g~~dg~ 328 (401)
T 4aez_A 254 TKTNHNAAVKAVAWCPWQSNLLATGGGT----MDKQIHFWNAATGARVNTVDAG-SQVTSLIWSPHSKEIMSTHGFPDNN 328 (401)
T ss_dssp EECCCSSCCCEEEECTTSTTEEEEECCT----TTCEEEEEETTTCCEEEEEECS-SCEEEEEECSSSSEEEEEECTTTCE
T ss_pred EecCCcceEEEEEECCCCCCEEEEecCC----CCCEEEEEECCCCCEEEEEeCC-CcEEEEEECCCCCeEEEEeecCCCc
Confidence 4544446689999999877888876432 1367888888765555445433 56788999998888887743 5788
Q ss_pred EEEEecCCCceEEEEe----ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1204 IEYCDFFGRSRKIVIS----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1204 I~~~d~dG~~~~~~~~----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
|...++.......+.. .....++++ .+.+. +.++-...+.|...+..++
T Consensus 329 i~v~~~~~~~~~~~~~~~~h~~~v~~~~~-----s~dg~-~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 329 LSIWSYSSSGLTKQVDIPAHDTRVLYSAL-----SPDGR-ILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp EEEEEEETTEEEEEEEEECCSSCCCEEEE-----CTTSS-EEEEECTTSEEEEEECCC-
T ss_pred EEEEecCCccceeEEEecCCCCCEEEEEE-----CCCCC-EEEEEeCCCcEEEEECCCC
Confidence 9999987643333322 455677888 22344 4445557789999998777
No 230
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.15 E-value=0.021 Score=67.02 Aligned_cols=237 Identities=7% Similarity=-0.026 Sum_probs=140.6
Q ss_pred eEEEEeecceEEEEeCCCCCCC-CcccccCC-ccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCC------CceeE--
Q psy5806 1014 FLLYTSRFGVIRRISLDTADLL-PVTLPFPE-YMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDST------RIKPI-- 1083 (1332)
Q Consensus 1014 ~ll~~~~~~~i~~i~l~~~~~~-~~~~pi~~-~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~------~~~~i-- 1083 (1332)
+|+....+..|+..++...... .....+.+ ...+..++|++.++.++++-...+.|+..++..+. ....+
T Consensus 81 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 160 (416)
T 2pm9_A 81 IIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQ 160 (416)
T ss_dssp CEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCC
T ss_pred eEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccc
Confidence 4444443322666666542111 12222222 23467899999844455555578889998887543 11111
Q ss_pred eecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceE-EEEecC------CCCceEEEEcCCCcEEEEEecCCCCCC
Q psy5806 1084 PLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHK-KILVND------LMEPLAIAVYPRRGLLFYSHWGLYDNS 1156 (1332)
Q Consensus 1084 ~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~-~~~~~~------~~~P~~iavdp~~g~Lywtd~~~~~~~ 1156 (1332)
.......+..|++.+.+++++++-...+.|.++++..... ..+... ...+..++++|....++++.... .
T Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---~ 237 (416)
T 2pm9_A 161 SMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGS---D 237 (416)
T ss_dssp SCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECC---S
T ss_pred ccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECC---C
Confidence 1122346778899877667777777778899999985433 334322 45689999999765555554332 0
Q ss_pred CCCcEEEEecCCC-ceEEEEe-cCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceE-EEEe-ecccceEEEecCC
Q psy5806 1157 PTTKIEKVYLDGS-YRTVLVE-EDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRK-IVIS-KVAPYGLSVRQSP 1232 (1332)
Q Consensus 1157 ~~~~I~r~~ldG~-~~~~l~~-~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~-~~~~-~~~P~glav~~~~ 1232 (1332)
..+.|...++... .....+. ..-..+..+++.+.+++++++-...+.|...|+...... .+.. .....++++
T Consensus 238 ~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~---- 313 (416)
T 2pm9_A 238 NDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKF---- 313 (416)
T ss_dssp SSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEE----
T ss_pred CCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEE----
Confidence 1125666677653 2222222 223456788888744455555566789999998654332 2222 555678888
Q ss_pred ccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1233 GKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1233 ~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.+.+..++.+-...+.|...+..++
T Consensus 314 -s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 314 -APEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp -CTTCTTEEEECCSSSEEEEEESCCC
T ss_pred -CCCCCCEEEEEecCCcEEEEEccCC
Confidence 2233357777778899999988766
No 231
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.15 E-value=0.095 Score=62.61 Aligned_cols=195 Identities=9% Similarity=0.002 Sum_probs=126.8
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECC--CCCCceeEee-cCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-Cc
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMS--DSTRIKPIPL-MNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQ 1121 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~--~g~~~~~i~~-~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~ 1121 (1332)
.+.+++|++.++.|+++-...+.|...++. ++.....+.. .....+.+|++++.++.|+.++. .+.|.++++. +.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK-FGDVYSIDINSIP 182 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-TSEEEEEETTSCC
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC-CCcEEEEecCCcc
Confidence 467999999999987777778899888877 5544444432 22346789999988888888765 5678888875 33
Q ss_pred eEE----EEecCCCCceEEEEcCC---CcEEEEEecCCCCCCCCCcEEEEecCCCceE-EEEecCCCCcceEEEecCCCE
Q psy5806 1122 HKK----ILVNDLMEPLAIAVYPR---RGLLFYSHWGLYDNSPTTKIEKVYLDGSYRT-VLVEEDLAFPNELAIDFKQRR 1193 (1332)
Q Consensus 1122 ~~~----~~~~~~~~P~~iavdp~---~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~-~l~~~~l~~p~glaiD~~~~~ 1193 (1332)
... .+..-...+..|+++|. ..+|+.+... ..|...++...... .+....-..+..+++. +++.
T Consensus 183 ~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-------~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~ 254 (450)
T 2vdu_B 183 EEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-------EHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYL 254 (450)
T ss_dssp CSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-------SCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTE
T ss_pred cccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-------CcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCE
Confidence 221 22223356789999996 3345444432 45666676544433 3232233567788998 7777
Q ss_pred EEEEEcCCCeEEEEecCCCc-eEEEEee--------------------------cccceEEEecCCccccccEEEEEECC
Q psy5806 1194 LFWADSTNKRIEYCDFFGRS-RKIVISK--------------------------VAPYGLSVRQSPGKAFIVELYWTDWE 1246 (1332)
Q Consensus 1194 LY~~d~~~~~I~~~d~dG~~-~~~~~~~--------------------------~~P~glav~~~~~~~~~~~lYwtd~~ 1246 (1332)
|+.+ ...+.|...|+.... ...+... ....+|+. .+.+.+||.+...
T Consensus 255 l~s~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~-----~~~~~~l~~~~~~ 328 (450)
T 2vdu_B 255 LLSA-GGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK-----SKNLPFVAFFVEA 328 (450)
T ss_dssp EEEE-ESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE-----CSSSSEEEEEETT
T ss_pred EEEE-eCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE-----eCCCCEEEEEECC
Confidence 7655 467899999987543 2222210 12234555 2347788888878
Q ss_pred CCEEEEEEe
Q psy5806 1247 AMSVVIARE 1255 (1332)
Q Consensus 1247 ~~~V~~~~~ 1255 (1332)
.+.|...+.
T Consensus 329 d~~i~iw~~ 337 (450)
T 2vdu_B 329 TKCIIILEM 337 (450)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEe
Confidence 889998887
No 232
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.13 E-value=0.32 Score=61.75 Aligned_cols=356 Identities=8% Similarity=0.002 Sum_probs=179.3
Q ss_pred ccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEecCCC---CCeEEEEeCCCCeEEEEecccCc---CCCCceEEE
Q psy5806 784 TESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFWLNLY---RPRSIVVHYGLGLMVWADWSRTR---LTNNRIEMA 857 (1332)
Q Consensus 784 p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~~~~---~P~~Iavdp~~g~lywtd~g~~~---~~~~~I~r~ 857 (1332)
+..+++-..++.|| + ...+.|.+.++.+.....++...-. .+.++++.|...+|..+...... .....|...
T Consensus 19 ~~~~~~spdg~~~~-~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 19 DPEAKWISDTEFIY-R-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCBSSSSCBCC-C-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred ccccEEcCCCcEEE-E-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 44555555555343 2 3455788888765444444432211 37899999986666665422110 001457777
Q ss_pred ecCCCCcEEEecc---cccCceeEEeCCCCCeEEEEeCCCCeEEEEccCCCceeEEeccCC-------------------
Q psy5806 858 HMDGTNRAVFETE---VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYAVQS------------------- 915 (1332)
Q Consensus 858 ~~dG~~~~~l~~~---l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~~~~------------------- 915 (1332)
++++.....+... -..+..+++.+++ ++|.++.. +.|...++++.....+.....
T Consensus 97 d~~~~~~~~l~~~~~~~~~~~~~~~SPdG-~~la~~~~--~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 97 KIPHGDPQSLDPPEVSNAKLQYAGWGPKG-QQLIFIFE--NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp ESSSCCCEECCCTTCCSCCCSBCCBCSST-TCEEEEET--TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred ECCCCceEeccCCccccccccccEECCCC-CEEEEEEC--CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEecc
Confidence 7776554444332 1235678888888 88888765 689999988766555433111
Q ss_pred cceEEEEe--CCEEEEEeCCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCcccc
Q psy5806 916 HPYTLTVL--DYYVYWTDVQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCA 993 (1332)
Q Consensus 916 ~P~~la~~--~~~iywtD~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~ 993 (1332)
+..+++.. +.+|+.+..... .+. .+..........+ .-.++.
T Consensus 174 ~~~~~~~SpDg~~la~~~~~~~-------------------~~~-~~~~~~~~~~~~~------~~~~~~---------- 217 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAAINDS-------------------RVP-IMELPTYTGSIYP------TVKPYH---------- 217 (723)
T ss_dssp SSEEEEECTTSSEEEEEEEECT-------------------TSC-EEEECCCSSSSSC------CCEEEE----------
T ss_pred CcceEEECCCCCEEEEEEECCC-------------------ccc-eEEeeccCCcCCC------cceecc----------
Confidence 11233332 223333221110 111 1110000000000 000000
Q ss_pred CCCCeeEccCCccccccCcceEEEEeecceEEEEeCCCCCCCCccc-c---cCCccceEEEEEeCCCcEEEEE-eCC--C
Q psy5806 994 CPTGILLSADRRSCFSRTREFLLYTSRFGVIRRISLDTADLLPVTL-P---FPEYMSSIFFDYHYSKNLIYFA-DMR--S 1066 (1332)
Q Consensus 994 Cp~g~~l~~d~~tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~-p---i~~~~~~~~id~d~~~~~lY~s-d~~--~ 1066 (1332)
...++.. .+. .. |+.+++........+. + ......+..++|.+.++.|+.. +.. .
T Consensus 218 ------~~~~G~~---~~~--------~~-l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 279 (723)
T 1xfd_A 218 ------YPKAGSE---NPS--------IS-LHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNV 279 (723)
T ss_dssp ------CCBTTSC---CCE--------EE-EEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCE
T ss_pred ------CCCCCCC---CCe--------eE-EEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCe
Confidence 0111111 111 12 4444443322110000 0 0012345788999988877444 332 2
Q ss_pred CeEEEEECCCCCCceeEeecCCCC----ceeeEEEecCCeEEEE-cCCCc------eEEEEe-eCCce---EEEEecCCC
Q psy5806 1067 GNLRTFDMSDSTRIKPIPLMNDTI----RDNFVIDWVANNIYYI-DSQMH------TINVAR-SDGQH---KKILVNDLM 1131 (1332)
Q Consensus 1067 ~~I~~~~l~~g~~~~~i~~~~~~~----p~glAvDw~~~~LY~t-d~~~~------~I~v~~-ldG~~---~~~~~~~~~ 1131 (1332)
..|+.+++.+|....++.....+. +..+++.+.++.|+++ ....+ +|.+++ .++.. ...+..+..
T Consensus 280 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~ 359 (723)
T 1xfd_A 280 SILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDW 359 (723)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSS
T ss_pred EEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCe
Confidence 468888887544333322211111 2478898889988886 43333 566677 45544 333433322
Q ss_pred CceE-EEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecC---CCCcceEEEecCCCEEEEEEcC
Q psy5806 1132 EPLA-IAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEED---LAFPNELAIDFKQRRLFWADST 1200 (1332)
Q Consensus 1132 ~P~~-iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~---l~~p~glaiD~~~~~LY~~d~~ 1200 (1332)
.... ++++|...+||++.... ......|++++++|......+... -.....++++++++.|.+.-..
T Consensus 360 ~~~~~~~~spdg~~l~~~~~~~--~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~ 430 (723)
T 1xfd_A 360 DVTKILAYDEKGNKIYFLSTED--LPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEG 430 (723)
T ss_dssp CEEEEEEEETTTTEEEEEESSS--CTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCS
T ss_pred EEEeeeEEcCCCCEEEEEEcCC--CCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccC
Confidence 3333 68999988998886432 112467999999886332222211 1234578899888888776444
No 233
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.12 E-value=0.2 Score=56.14 Aligned_cols=207 Identities=12% Similarity=0.043 Sum_probs=124.2
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKK 1124 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~ 1124 (1332)
.+.+++|++.+..|.-+. ..+.|+..++.++.....+. ........+++.+.++.|..+ ...+.|.++++. |+...
T Consensus 15 ~V~~~~fsp~~~~l~s~~-~dg~v~lWd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~-s~d~~i~vwd~~~~~~~~ 91 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTL-YSGRVELWNYETQVEVRSIQ-VTETPVRAGKFIARKNWIIVG-SDDFRIRVFNYNTGEKVV 91 (304)
T ss_dssp CEEEEEECSSSSEEEEEE-TTSEEEEEETTTTEEEEEEE-CCSSCEEEEEEEGGGTEEEEE-ETTSEEEEEETTTCCEEE
T ss_pred ceEEEEECCCCCEEEEEc-CCCcEEEEECCCCceeEEee-ccCCcEEEEEEeCCCCEEEEE-CCCCEEEEEECCCCcEEE
Confidence 367999999988777665 77889988977443333222 223356778888777766554 456789999997 55444
Q ss_pred EEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCc-eEEEEecCCCCcceEEEecCCCEEEEEEcCCCe
Q psy5806 1125 ILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSY-RTVLVEEDLAFPNELAIDFKQRRLFWADSTNKR 1203 (1332)
Q Consensus 1125 ~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~-~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~ 1203 (1332)
.+..-......|+++|...+|+-+. .. ..|..-++.... ....+...-.....+++++.++.++.+-...+.
T Consensus 92 ~~~~h~~~v~~~~~~~~~~~l~sgs-~D------~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 92 DFEAHPDYIRSIAVHPTKPYVLSGS-DD------LTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (304)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEE-TT------SCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSE
T ss_pred EEeCCCCcEEEEEEcCCCCEEEEEC-CC------CeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCe
Confidence 4554446689999999665554443 32 456666665432 222333233456788888866555666667788
Q ss_pred EEEEecCCCce-EEEEe-e-cccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEec
Q psy5806 1204 IEYCDFFGRSR-KIVIS-K-VAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRS 1269 (1332)
Q Consensus 1204 I~~~d~dG~~~-~~~~~-~-~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~ 1269 (1332)
|...|+..... ..+.. . .....+++. + . .++.+..+-...+.|...+..++ .....+..
T Consensus 165 v~iwd~~~~~~~~~~~~~~~~~v~~~~~~--~-~-~~~~~l~s~s~D~~i~iWd~~~~---~~~~~~~~ 226 (304)
T 2ynn_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVDYY--P-L-PDKPYMITASDDLTIKIWDYQTK---SCVATLEG 226 (304)
T ss_dssp EEEEETTCSSCSEEEECCCTTCEEEEEEC--C-S-TTCCEEEEEETTSEEEEEETTTT---EEEEEEEC
T ss_pred EEEEECCCCCccceeccCCcCcEEEEEEE--E-c-CCCCEEEEEcCCCeEEEEeCCCC---ccceeeCC
Confidence 99888864332 22222 1 122233330 0 0 12334445556778888887766 44444443
No 234
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.09 E-value=0.16 Score=58.76 Aligned_cols=167 Identities=5% Similarity=-0.047 Sum_probs=93.1
Q ss_pred ceeEEeecC-CCceEEEEecC-C----CceEEEecCCCCceEEEeCC-CCCccceeEecCCCeEEEEe--CCCCe--EEE
Q psy5806 740 MVASVDVDT-KNEYIYWSDIS-E----KTIERVRFDMTGRERLVVND-LNRTESIAVDAIGRKIYWTD--MNAQT--IMV 808 (1332)
Q Consensus 740 ~~~~id~d~-~~~~lYwsD~~-~----~~I~r~~~~g~~~~~vi~~~-~~~p~glAvD~~~~nLYwtD--~~~~~--I~v 808 (1332)
....+.+.+ .+++|++.... . ..|+.+++++.....+.... ...+..+++.+.++.|+++. .+... |.+
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 268 (396)
T 3c5m_A 189 WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYK 268 (396)
T ss_dssp CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEE
T ss_pred ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEE
Confidence 345566777 45556665432 2 46888888776544443311 22355678888888887773 23334 999
Q ss_pred EeCCCCceEEEEecCCCCCeEEEEeCCCCeEEEEecccC-----------cCCCCceEEEecCCCCcEEEecc-cc----
Q psy5806 809 SDIDGKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRT-----------RLTNNRIEMAHMDGTNRAVFETE-VI---- 872 (1332)
Q Consensus 809 ~~ldG~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~-----------~~~~~~I~r~~~dG~~~~~l~~~-l~---- 872 (1332)
.++++.....+.... . ..++..|..|.+++...... ......|.+.++++.....+... ..
T Consensus 269 ~d~~~g~~~~l~~~~--~-~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~ 345 (396)
T 3c5m_A 269 ANPETLENEEVMVMP--P-CSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVL 345 (396)
T ss_dssp ECTTTCCEEEEEECC--S-EEEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCB
T ss_pred EECCCCCeEEeeeCC--C-CCCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccc
Confidence 998655444433211 1 22677772354444321100 00125788888876655444433 21
Q ss_pred ------cCceeEEeCCCCCeEEEEeCC--CCeEEEEccCCCceeEE
Q psy5806 873 ------WPSCLAIDYSDNPKLYWVDTS--KHTIEYKTLATGRAKRA 910 (1332)
Q Consensus 873 ------~P~gl~iD~~~~~~lYw~d~~--~~~I~~~~~dG~~~~~l 910 (1332)
.+..+++..++ ++|+++... ...|+.+++++...+++
T Consensus 346 ~~~~~~~~~~~~~s~dg-~~l~~~s~~~~~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 346 DGDRQITHPHPSFTPND-DGVLFTSDFEGVPAIYIADVPESYKHLE 390 (396)
T ss_dssp TTBSSTTCCCCEECTTS-SEEEEEECTTSSCEEEEEECCTTCC---
T ss_pred cccccCCCCCceEccCC-CeEEEEecCCCCceEEEEEEcccccccc
Confidence 14456777878 888887653 34678888877665554
No 235
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.08 E-value=0.19 Score=55.80 Aligned_cols=209 Identities=11% Similarity=0.005 Sum_probs=122.2
Q ss_pred cceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeE--eecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCce
Q psy5806 1045 MSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPI--PLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQH 1122 (1332)
Q Consensus 1045 ~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i--~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~ 1122 (1332)
..+..++|++.++.|+... ..+.|...++.+....+.+ ..........|+++ ++.|+.+ ...+.|.+++ .++.
T Consensus 60 ~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~-~~d~~i~~~d-~~~~ 134 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGG-KDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DGVVISG-SWDKTAKVWK-EGSL 134 (313)
T ss_dssp SCEEEEEEETTTTEEEEEE-TTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE--TTEEEEE-ETTSEEEEEE-TTEE
T ss_pred ccEEEEEECCCCCEEEEec-CCCeEEEEEeeecCCCCcccchhhcccCEEEEEec--CCEEEEE-eCCCCEEEEc-CCcE
Confidence 3467899999888777766 6788888887754322222 21223345566664 6666544 4567888888 4544
Q ss_pred EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCC
Q psy5806 1123 KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNK 1202 (1332)
Q Consensus 1123 ~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~ 1202 (1332)
...+.........+++.|..+.++++-... +.|...+ .+.....+....-.....+++.+++. +++-...+
T Consensus 135 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------~~i~i~d-~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg 205 (313)
T 3odt_A 135 VYNLQAHNASVWDAKVVSFSENKFLTASAD------KTIKLWQ-NDKVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDG 205 (313)
T ss_dssp EEEEECCSSCEEEEEEEETTTTEEEEEETT------SCEEEEE-TTEEEEEECSSCSSCEEEEEEEETTE--EEEEETTS
T ss_pred EEecccCCCceeEEEEccCCCCEEEEEECC------CCEEEEe-cCceEEEEeccCcccEEEEEEcCCCe--EEEccCCC
Confidence 444544455678889888444444443332 4566665 22222222221334567788887655 44556778
Q ss_pred eEEEEecCCCc-eEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEecCCCCeeeE
Q psy5806 1203 RIEYCDFFGRS-RKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRSNQEDFLNI 1277 (1332)
Q Consensus 1203 ~I~~~d~dG~~-~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~~~~~~~~i 1277 (1332)
.|...|+.... ...+.. .....+|++ ..+++| ++-...+.|...+..++ .....+......+..+
T Consensus 206 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~------~~~~~l-~~~~~dg~v~iwd~~~~---~~~~~~~~~~~~i~~~ 272 (313)
T 3odt_A 206 LIKLVDMHTGDVLRTYEGHESFVYCIKL------LPNGDI-VSCGEDRTVRIWSKENG---SLKQVITLPAISIWSV 272 (313)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEE------CTTSCE-EEEETTSEEEEECTTTC---CEEEEEECSSSCEEEE
T ss_pred eEEEEECCchhhhhhhhcCCceEEEEEE------ecCCCE-EEEecCCEEEEEECCCC---ceeEEEeccCceEEEE
Confidence 89999987433 333322 555677888 123344 45556788998888777 5555554433333333
No 236
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.08 E-value=0.31 Score=54.57 Aligned_cols=196 Identities=7% Similarity=-0.060 Sum_probs=123.3
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKK 1124 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~ 1124 (1332)
.+.+++|++.++.|+.+. ..+.|+..++.++..... +.........|++.+.++.|+.+ ...+.|.++++. ++...
T Consensus 25 ~v~~~~~s~~~~~l~s~~-~dg~i~iw~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~-~~d~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSS-ADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDSNLLVSA-SDDKTLKIWDVSSGKCLK 101 (312)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSCEEEEETTTCCEEEE-ECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEEE
T ss_pred cEEEEEECCCCCEEEEee-CCCeEEEEeCCCcccchh-hccCCCceEEEEEcCCCCEEEEE-CCCCEEEEEECCCCcEEE
Confidence 367899999887776654 677888888764433333 32334467889998877666554 456789999997 44444
Q ss_pred EEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeE
Q psy5806 1125 ILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRI 1204 (1332)
Q Consensus 1125 ~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I 1204 (1332)
.+.........++++|...+|+..... +.|...++........+...-.....++++++++.|+.+ ...+.|
T Consensus 102 ~~~~~~~~v~~~~~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i 173 (312)
T 4ery_A 102 TLKGHSNYVFCCNFNPQSNLIVSGSFD-------ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS-SYDGLC 173 (312)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETT-------SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSCE
T ss_pred EEcCCCCCEEEEEEcCCCCEEEEEeCC-------CcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEE-eCCCcE
Confidence 454444567889999966666555432 467777876544433343333456678888877766655 466789
Q ss_pred EEEecCCCc-eEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1205 EYCDFFGRS-RKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1205 ~~~d~dG~~-~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
...|+.... ...+.. ......+++ ++.+.+|+. -...+.|...+..++
T Consensus 174 ~~wd~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~-~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 174 RIWDTASGQCLKTLIDDDNPPVSFVKF-----SPNGKYILA-ATLDNTLKLWDYSKG 224 (312)
T ss_dssp EEEETTTCCEEEEECCSSCCCEEEEEE-----CTTSSEEEE-EETTTEEEEEETTTT
T ss_pred EEEECCCCceeeEEeccCCCceEEEEE-----CCCCCEEEE-EcCCCeEEEEECCCC
Confidence 988886433 333332 223345666 223444444 445678888887666
No 237
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.06 E-value=0.16 Score=58.95 Aligned_cols=201 Identities=10% Similarity=0.007 Sum_probs=122.0
Q ss_pred cceEEEEEe----CCCcE-EEEEeCCCCeEEEEECCC------CCCce-----eEe------ecCCCCceeeEEEecCCe
Q psy5806 1045 MSSIFFDYH----YSKNL-IYFADMRSGNLRTFDMSD------STRIK-----PIP------LMNDTIRDNFVIDWVANN 1102 (1332)
Q Consensus 1045 ~~~~~id~d----~~~~~-lY~sd~~~~~I~~~~l~~------g~~~~-----~i~------~~~~~~p~glAvDw~~~~ 1102 (1332)
..+..++|. +.++. |+.+. ..+.|+..++.. +.... .+. ......+..+++.+.+
T Consensus 122 ~~v~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-- 198 (397)
T 1sq9_A 122 HSFWALKWGASNDRLLSHRLVATD-VKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-- 198 (397)
T ss_dssp SCEEEEEEECCC----CEEEEEEE-TTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--
T ss_pred CcEEEEEEeeccCCCCceEEEEEe-CCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--
Confidence 457899999 88887 55554 678888888764 33333 322 1234467889998766
Q ss_pred EEEEcCCCceEEEEeeCCc-eEEEEec---C---CCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEE
Q psy5806 1103 IYYIDSQMHTINVARSDGQ-HKKILVN---D---LMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLV 1175 (1332)
Q Consensus 1103 LY~td~~~~~I~v~~ldG~-~~~~~~~---~---~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~ 1175 (1332)
++++....+.|.++++... ....+.. - ...+..|+++|...+|+.+.... ..+.|...++........+
T Consensus 199 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~----~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 199 LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN----SFGCITLYETEFGERIGSL 274 (397)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET----TEEEEEEEETTTCCEEEEE
T ss_pred eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC----CCceEEEEECCCCccccee
Confidence 5556666789999999744 3333433 2 46789999999766666554330 0136777787654444444
Q ss_pred ec-------------CCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe-----------------------
Q psy5806 1176 EE-------------DLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS----------------------- 1219 (1332)
Q Consensus 1176 ~~-------------~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~----------------------- 1219 (1332)
.. .-.....+++.++++.|+.+ ...+.|...|+........+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 353 (397)
T 1sq9_A 275 SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSA-GWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLA 353 (397)
T ss_dssp CBC--------CCBSBSSCEEEEEECSSSSEEEEE-ETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCS
T ss_pred ccCcccccccccccccCCcEEEEEECCCCCEEEEE-eCCCeEEEEEcCCCceeEEEecccCcccchhhhhcccccccccc
Confidence 33 23556788999887777655 467889999986443222222
Q ss_pred ecccceEEEecCCccccc---------cEEEEEECCCCEEEEEEecCC
Q psy5806 1220 KVAPYGLSVRQSPGKAFI---------VELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1220 ~~~P~glav~~~~~~~~~---------~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.....+|++ .+.+ ..++++-...+.|...+..+|
T Consensus 354 ~~~v~~~~~-----~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 354 EPGVFDVKF-----LKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp SCCEEEEEE-----ECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred CCceeEEEe-----ccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 122456777 1111 045555556788888887665
No 238
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.06 E-value=0.16 Score=57.56 Aligned_cols=191 Identities=9% Similarity=0.023 Sum_probs=118.5
Q ss_pred eEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCC-ceEEE
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDG-QHKKI 1125 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG-~~~~~ 1125 (1332)
+..++|++.++.|... ...+.|...++..+.....+ .........+++.+.++.|..+. ..+.|.++++.. +....
T Consensus 125 ~~~~~~spdg~~l~~g-~~dg~v~i~~~~~~~~~~~~-~~~~~~v~~~~~spdg~~lasg~-~dg~i~iwd~~~~~~~~~ 201 (321)
T 3ow8_A 125 AWTLAFSPDSQYLATG-THVGKVNIFGVESGKKEYSL-DTRGKFILSIAYSPDGKYLASGA-IDGIINIFDIATGKLLHT 201 (321)
T ss_dssp CCCEEECTTSSEEEEE-CTTSEEEEEETTTCSEEEEE-ECSSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEEE
T ss_pred EEEEEECCCCCEEEEE-cCCCcEEEEEcCCCceeEEe-cCCCceEEEEEECCCCCEEEEEc-CCCeEEEEECCCCcEEEE
Confidence 4578899988766655 47788999998754433322 23344578899998777775544 456899999874 43344
Q ss_pred EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEE
Q psy5806 1126 LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIE 1205 (1332)
Q Consensus 1126 ~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~ 1205 (1332)
+..-....+.|+++|...+| .+-... +.|..-++........+...-.....+++.++++.|+-+ ...+.|.
T Consensus 202 ~~~h~~~v~~l~~spd~~~l-~s~s~d------g~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~-s~D~~v~ 273 (321)
T 3ow8_A 202 LEGHAMPIRSLTFSPDSQLL-VTASDD------GYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSS-SSDKSVK 273 (321)
T ss_dssp ECCCSSCCCEEEECTTSCEE-EEECTT------SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSCEE
T ss_pred EcccCCceeEEEEcCCCCEE-EEEcCC------CeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEE-eCCCcEE
Confidence 54333457899999955444 443332 457777776555444444334556788998887776654 5677888
Q ss_pred EEecCCCce-EEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEE
Q psy5806 1206 YCDFFGRSR-KIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAR 1254 (1332)
Q Consensus 1206 ~~d~dG~~~-~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~ 1254 (1332)
..|+..... ..+.. .....+|++ .+.+.+| ++-...+.|...+
T Consensus 274 iwd~~~~~~~~~~~~h~~~v~~v~~-----s~~g~~l-~s~~~d~~i~vwd 318 (321)
T 3ow8_A 274 VWDVGTRTCVHTFFDHQDQVWGVKY-----NGNGSKI-VSVGDDQEIHIYD 318 (321)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEE-----CTTSSEE-EEEETTCCEEEEE
T ss_pred EEeCCCCEEEEEEcCCCCcEEEEEE-----CCCCCEE-EEEeCCCeEEEEe
Confidence 888864332 22222 455677777 2223334 4444556665554
No 239
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.05 E-value=0.6 Score=52.10 Aligned_cols=206 Identities=13% Similarity=0.036 Sum_probs=125.6
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKK 1124 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~ 1124 (1332)
.+..++|++.++.|+... ..+.|...++.++.....+. ........+++.+.++.|+.+ ...+.|.++++. ++...
T Consensus 67 ~v~~~~~~~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~-~~d~~i~iwd~~~~~~~~ 143 (312)
T 4ery_A 67 GISDVAWSSDSNLLVSAS-DDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSG-SFDESVRIWDVKTGKCLK 143 (312)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEE-ETTSCEEEEETTTCCEEE
T ss_pred ceEEEEEcCCCCEEEEEC-CCCEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEE-eCCCcEEEEECCCCEEEE
Confidence 467899999887776665 67889999987544333332 334456788888766666544 456689999997 44444
Q ss_pred EEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceE-EEEecCCCCcceEEEecCCCEEEEEEcCCCe
Q psy5806 1125 ILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRT-VLVEEDLAFPNELAIDFKQRRLFWADSTNKR 1203 (1332)
Q Consensus 1125 ~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~-~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~ 1203 (1332)
.+.........++++|...+|+.+... +.|...++...... .+..........++++++++.|..+ ...+.
T Consensus 144 ~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~d~~ 215 (312)
T 4ery_A 144 TLPAHSDPVSAVHFNRDGSLIVSSSYD-------GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA-TLDNT 215 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEE-ETTTE
T ss_pred EecCCCCcEEEEEEcCCCCEEEEEeCC-------CcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEE-cCCCe
Confidence 454333457889999965555544432 45777777544432 2333222345568899888777765 45678
Q ss_pred EEEEecCCCceEEEEe--ecccceE--EEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEecC
Q psy5806 1204 IEYCDFFGRSRKIVIS--KVAPYGL--SVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRSN 1270 (1332)
Q Consensus 1204 I~~~d~dG~~~~~~~~--~~~P~gl--av~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~~ 1270 (1332)
|...|+.......... ......+ .. ...++.++.+-...+.|...+..++ ..+..+...
T Consensus 216 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~sg~~dg~i~vwd~~~~---~~~~~~~~h 278 (312)
T 4ery_A 216 LKLWDYSKGKCLKTYTGHKNEKYCIFANF-----SVTGGKWIVSGSEDNLVYIWNLQTK---EIVQKLQGH 278 (312)
T ss_dssp EEEEETTTTEEEEEECSSCCSSSCCCEEE-----ECSSSCEEEECCTTSCEEEEETTTC---CEEEEECCC
T ss_pred EEEEECCCCcEEEEEEecCCceEEEEEEE-----EeCCCcEEEEECCCCEEEEEECCCc---hhhhhhhcc
Confidence 9998886443222222 1111111 11 0134555666667788888888776 444444433
No 240
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.02 E-value=0.08 Score=60.37 Aligned_cols=155 Identities=9% Similarity=-0.019 Sum_probs=94.8
Q ss_pred cceEEEEEeCCCcEEEEEeCCC----CeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCC-----------
Q psy5806 1045 MSSIFFDYHYSKNLIYFADMRS----GNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQ----------- 1109 (1332)
Q Consensus 1045 ~~~~~id~d~~~~~lY~sd~~~----~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~----------- 1109 (1332)
..+..+.|+|.+++|+++.... ..|+.+++.++ ....+.... . +.++++.+.++.|+++...
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g-~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETL-SSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTT-EEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC--------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCC-ceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence 4567889999999998876432 34888887733 333333222 2 6778887788888887422
Q ss_pred ---------------CceEEEEeeCCceE-EEEecCCCCceEEEEcCCCcEEEEEecCCCCC--CCCCcEEEEecCCCce
Q psy5806 1110 ---------------MHTINVARSDGQHK-KILVNDLMEPLAIAVYPRRGLLFYSHWGLYDN--SPTTKIEKVYLDGSYR 1171 (1332)
Q Consensus 1110 ---------------~~~I~v~~ldG~~~-~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~--~~~~~I~r~~ldG~~~ 1171 (1332)
...|.++++++... ..+... ....++++|. |.+|.+....... .+...|+.++ .| ..
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~--~~~~~~~spd-g~~~~~~~~~~~~~~~~~~~l~~~d-~~-~~ 210 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP--RFSSGIWHRD-KIVVNVPHREIIPQYFKFWDIYIWE-DG-KE 210 (347)
T ss_dssp -CCCC---------CEEEEEEEETTTTEEEEEEEEE--TTCEEEEETT-EEEEEEECCCSSCCSSCCEEEEEEE-TT-EE
T ss_pred ccceeecCcccccCccceEEEEECCCCeEEeeecCC--CcccccCCCC-eEEEEEecccccccccccccEEEeC-CC-ce
Confidence 35688888875544 444332 7788999995 5555443321000 0135788888 44 33
Q ss_pred EEEEecCCCCcceEEEecCCCEEEEEEcC-------CCeEEEEecCCC
Q psy5806 1172 TVLVEEDLAFPNELAIDFKQRRLFWADST-------NKRIEYCDFFGR 1212 (1332)
Q Consensus 1172 ~~l~~~~l~~p~glaiD~~~~~LY~~d~~-------~~~I~~~d~dG~ 1212 (1332)
+.+... ... ..+++++++|+++... ..+|+.+| .|.
T Consensus 211 ~~l~~~--~~~--~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~~ 253 (347)
T 2gop_A 211 EKMFEK--VSF--YAVDSDGERILLYGKPEKKYMSEHNKLYIYD-GKE 253 (347)
T ss_dssp EEEEEE--ESE--EEEEECSSCEEEEECCSSSCCCSSCEEEEEC-SSC
T ss_pred EEeccC--cce--eeECCCCCEEEEEEccccCCccccceEEEEC-CCc
Confidence 444432 222 2347788888877543 35788888 443
No 241
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=97.00 E-value=0.0004 Score=90.68 Aligned_cols=37 Identities=38% Similarity=1.023 Sum_probs=33.8
Q ss_pred CCCCCCEEecCCCEEEeeeecCCCCCCCCCCCcccccc
Q psy5806 58 KCSPDEHRCTTGHCILKTWLCDGIPDCSLGEDERNCNK 95 (1332)
Q Consensus 58 ~C~~~~f~C~~g~Ci~~~~~CDg~~DC~DgsDE~~C~~ 95 (1332)
.|. ++|+|.+|+||+..|+|||+.||+|+|||.+|+.
T Consensus 118 ~C~-~~F~C~~g~ci~~~~~c~g~~dC~d~sde~~C~~ 154 (913)
T 3t5o_A 118 DCK-NKFRCDSGRCIARKLECNGENDCGDNSDERDCGR 154 (913)
T ss_dssp CCS-SEEECTTSCEEEGGGSSSSSCCSSSSGGGTTCSS
T ss_pred Ccc-cccccCCCceEccceecCCcccCCCccccccCCC
Confidence 464 6799999999999999999999999999999864
No 242
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.00 E-value=0.34 Score=56.99 Aligned_cols=242 Identities=11% Similarity=0.023 Sum_probs=140.3
Q ss_pred eEEEEeecceEEEEeCCCCCCCCcccccCC-ccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCce
Q psy5806 1014 FLLYTSRFGVIRRISLDTADLLPVTLPFPE-YMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRD 1092 (1332)
Q Consensus 1014 ~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~-~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~ 1092 (1332)
+|+....+..|+..++...... ..+.+ ...+.+++|++.++.|.-. ...++|...++.++.....+ ........
T Consensus 122 ~l~s~s~Dg~i~vwd~~~~~~~---~~l~~h~~~V~~v~~~~~~~~l~sg-s~D~~i~iwd~~~~~~~~~~-~~h~~~V~ 196 (410)
T 1vyh_C 122 VMVSASEDATIKVWDYETGDFE---RTLKGHTDSVQDISFDHSGKLLASC-SADMTIKLWDFQGFECIRTM-HGHDHNVS 196 (410)
T ss_dssp EEEEEESSSCEEEEETTTCCCC---EEECCCSSCEEEEEECTTSSEEEEE-ETTSCCCEEETTSSCEEECC-CCCSSCEE
T ss_pred EEEEEeCCCeEEEEECCCCcEE---EEEeccCCcEEEEEEcCCCCEEEEE-eCCCeEEEEeCCCCceeEEE-cCCCCCEE
Confidence 4444443332776676544322 11222 2346799999887755544 47788888887643222222 12234678
Q ss_pred eeEEEecCCeEEEEcCCCceEEEEeeC-CceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCce
Q psy5806 1093 NFVIDWVANNIYYIDSQMHTINVARSD-GQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYR 1171 (1332)
Q Consensus 1093 glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~ 1171 (1332)
.+++.+.++.|+ +-...+.|.++++. |.....+.......+.++++| .|.++.+-... +.|..-++.....
T Consensus 197 ~v~~~p~~~~l~-s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~g~~l~s~s~D------~~v~vwd~~~~~~ 268 (410)
T 1vyh_C 197 SVSIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSND------QTVRVWVVATKEC 268 (410)
T ss_dssp EEEECSSSSEEE-EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TSSEEEEEETT------SCEEEEETTTCCE
T ss_pred EEEEeCCCCEEE-EEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECC-CCCEEEEEcCC------CeEEEEECCCCce
Confidence 899987666664 44556789999987 554444544445678899988 45555554433 4566666655544
Q ss_pred EEEEecCCCCcceEEEecCC-------------------CEEEEEEcCCCeEEEEecCCCc-eEEEEe-ecccceEEEec
Q psy5806 1172 TVLVEEDLAFPNELAIDFKQ-------------------RRLFWADSTNKRIEYCDFFGRS-RKIVIS-KVAPYGLSVRQ 1230 (1332)
Q Consensus 1172 ~~l~~~~l~~p~glaiD~~~-------------------~~LY~~d~~~~~I~~~d~dG~~-~~~~~~-~~~P~glav~~ 1230 (1332)
...+...-.....+++.++. +.+.++-...+.|...|+.... ...+.. .....+|++
T Consensus 269 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~-- 346 (410)
T 1vyh_C 269 KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF-- 346 (410)
T ss_dssp EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--
T ss_pred eeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEE--
Confidence 43333233445566666542 3455566677889888886433 222222 444567888
Q ss_pred CCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEecCCCCeeeE
Q psy5806 1231 SPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRSNQEDFLNI 1277 (1332)
Q Consensus 1231 ~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~~~~~~~~i 1277 (1332)
. .++.+.++-...+.|...+..++ .....+......+..+
T Consensus 347 ---~-~~g~~l~s~s~D~~i~vwd~~~~---~~~~~~~~h~~~v~~l 386 (410)
T 1vyh_C 347 ---H-SGGKFILSCADDKTLRVWDYKNK---RCMKTLNAHEHFVTSL 386 (410)
T ss_dssp ---C-SSSSCEEEEETTTEEEEECCTTS---CCCEEEECCSSCEEEE
T ss_pred ---c-CCCCEEEEEeCCCeEEEEECCCC---ceEEEEcCCCCcEEEE
Confidence 2 23334445557788999888776 4445554433334333
No 243
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.00 E-value=0.32 Score=56.76 Aligned_cols=211 Identities=8% Similarity=-0.008 Sum_probs=126.9
Q ss_pred eEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceE-EE
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHK-KI 1125 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~-~~ 1125 (1332)
+..++|++.++.|+... ..+.|+..++.++... ..+......+..|++.+.++.|+.+ ...+.|.++++..... ..
T Consensus 126 v~~v~~s~dg~~l~s~~-~d~~i~iwd~~~~~~~-~~~~~h~~~v~~~~~~p~~~~l~s~-s~d~~v~iwd~~~~~~~~~ 202 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGA-EDRLIRIWDIENRKIV-MILQGHEQDIYSLDYFPSGDKLVSG-SGDRTVRIWDLRTGQCSLT 202 (393)
T ss_dssp EEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEE-EEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTTEEEEE
T ss_pred EEEEEECCCCCEEEEEc-CCCeEEEEECCCCcEE-EEEccCCCCEEEEEEcCCCCEEEEe-cCCCcEEEEECCCCeeEEE
Confidence 57889999887776654 6788998897743222 2222233457789998777777544 4567899999974433 33
Q ss_pred EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEe-------cCCCCcceEEEecCCCEEEEEE
Q psy5806 1126 LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVE-------EDLAFPNELAIDFKQRRLFWAD 1198 (1332)
Q Consensus 1126 ~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~-------~~l~~p~glaiD~~~~~LY~~d 1198 (1332)
+. .......+++.|..|.++.+.... +.|...++........+. ..-.....++++++++.|+-+
T Consensus 203 ~~-~~~~v~~~~~~~~~~~~l~~~s~d------~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~- 274 (393)
T 1erj_A 203 LS-IEDGVTTVAVSPGDGKYIAAGSLD------RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG- 274 (393)
T ss_dssp EE-CSSCEEEEEECSTTCCEEEEEETT------SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE-
T ss_pred EE-cCCCcEEEEEECCCCCEEEEEcCC------CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE-
Confidence 43 335688999999777766665433 456666665443322221 112346678898887777654
Q ss_pred cCCCeEEEEecCCCce-------------EEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceE
Q psy5806 1199 STNKRIEYCDFFGRSR-------------KIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDV 1264 (1332)
Q Consensus 1199 ~~~~~I~~~d~dG~~~-------------~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~ 1264 (1332)
...+.|...|+..... ..+.. .....++++ . .++....+-...+.|...+..++ ...
T Consensus 275 s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-----~-~~~~~l~sgs~D~~v~iwd~~~~---~~~ 345 (393)
T 1erj_A 275 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT-----T-QNDEYILSGSKDRGVLFWDKKSG---NPL 345 (393)
T ss_dssp ETTSEEEEEEC---------------CEEEEEECCSSCEEEEEE-----C-GGGCEEEEEETTSEEEEEETTTC---CEE
T ss_pred eCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEE-----C-CCCCEEEEEeCCCeEEEEECCCC---eEE
Confidence 4667888888753211 11111 233456777 2 23444455567789999998887 555
Q ss_pred EEEecCCCCeeeE
Q psy5806 1265 HLIRSNQEDFLNI 1277 (1332)
Q Consensus 1265 ~~~~~~~~~~~~i 1277 (1332)
..+......+..+
T Consensus 346 ~~l~~h~~~v~~v 358 (393)
T 1erj_A 346 LMLQGHRNSVISV 358 (393)
T ss_dssp EEEECCSSCEEEE
T ss_pred EEECCCCCCEEEE
Confidence 5554444444443
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.00 E-value=0.034 Score=62.93 Aligned_cols=177 Identities=11% Similarity=0.119 Sum_probs=111.5
Q ss_pred CcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEEEecCCCCceE
Q psy5806 1056 KNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKILVNDLMEPLA 1135 (1332)
Q Consensus 1056 ~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~~~~~~~~P~~ 1135 (1332)
++.||+.. ..+.|++++.. |....... ........+++|. .++||+... .+.|..++.+|+..............
T Consensus 107 ~~~l~v~t-~~~~l~~~d~~-g~~~~~~~-~~~~~~~~~~~~~-~g~l~vgt~-~~~l~~~d~~g~~~~~~~~~~~~~~~ 181 (330)
T 3hxj_A 107 EDILYVTS-MDGHLYAINTD-GTEKWRFK-TKKAIYATPIVSE-DGTIYVGSN-DNYLYAINPDGTEKWRFKTNDAITSA 181 (330)
T ss_dssp TTEEEEEC-TTSEEEEECTT-SCEEEEEE-CSSCCCSCCEECT-TSCEEEECT-TSEEEEECTTSCEEEEEECSSCCCSC
T ss_pred CCEEEEEe-cCCEEEEEcCC-CCEEEEEc-CCCceeeeeEEcC-CCEEEEEcC-CCEEEEECCCCCEeEEEecCCCceee
Confidence 56777764 45678888755 43322221 2223345677774 667887654 46788888886654443333345667
Q ss_pred EEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceE
Q psy5806 1136 IAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRK 1215 (1332)
Q Consensus 1136 iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~ 1215 (1332)
+++|+ +|.||++. +. |++.+.+|........ ....+..+++|. +++||++.. .+.|.+++.+|....
T Consensus 182 ~~~d~-~g~l~v~t-~~--------l~~~d~~g~~~~~~~~-~~~~~~~~~~~~-~g~l~v~t~-~~gl~~~~~~g~~~~ 248 (330)
T 3hxj_A 182 ASIGK-DGTIYFGS-DK--------VYAINPDGTEKWNFYA-GYWTVTRPAISE-DGTIYVTSL-DGHLYAINPDGTEKW 248 (330)
T ss_dssp CEECT-TCCEEEES-SS--------EEEECTTSCEEEEECC-SSCCCSCCEECT-TSCEEEEET-TTEEEEECTTSCEEE
T ss_pred eEEcC-CCEEEEEe-CE--------EEEECCCCcEEEEEcc-CCcceeceEECC-CCeEEEEcC-CCeEEEECCCCCEeE
Confidence 88887 78898887 54 8888866654433322 224566788884 458888764 567888887776543
Q ss_pred EEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1216 IVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1216 ~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.... ...+.++++ +.++.||++.. .+.|+++++ +|
T Consensus 249 ~~~~~~~~~~~~~~------~~~g~l~v~t~-~ggl~~~d~-~g 284 (330)
T 3hxj_A 249 RFKTGKRIESSPVI------GNTDTIYFGSY-DGHLYAINP-DG 284 (330)
T ss_dssp EEECSSCCCSCCEE------CTTSCEEEECT-TCEEEEECT-TS
T ss_pred EeeCCCCccccceE------cCCCeEEEecC-CCCEEEECC-CC
Confidence 3322 333456777 34788988874 568999986 55
No 245
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.99 E-value=0.15 Score=65.00 Aligned_cols=199 Identities=7% Similarity=0.005 Sum_probs=124.5
Q ss_pred eEEEEEeCCCcEEEEEeCCCC----eEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCC------------
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSG----NLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQM------------ 1110 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~----~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~------------ 1110 (1332)
..++.+++.+++|.++....| .|+.+++.+|....... ... ...+++..+.++.||++....
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-ERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-EEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-cCc-ccceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 568899999998887754443 79999988554333222 111 245677777788999875432
Q ss_pred ---ceEEEEeeCCce-E-EEEecCCC---CceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCC------C--ceEEE
Q psy5806 1111 ---HTINVARSDGQH-K-KILVNDLM---EPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDG------S--YRTVL 1174 (1332)
Q Consensus 1111 ---~~I~v~~ldG~~-~-~~~~~~~~---~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG------~--~~~~l 1174 (1332)
..|.+.++.+.. . ..+..... ...+++++|...+|+++.... ......|+..++++ . ..+.|
T Consensus 205 ~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~--~~~~~~l~~~d~~~~~~~~~~~~~~~~l 282 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREG--CDPVNRLWYCDLQQESNGITGILKWVKL 282 (710)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECS--SSSCCEEEEEEGGGSSSSSCSSCCCEEE
T ss_pred CCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEcc--CCCccEEEEEECcccccccCCccceEEe
Confidence 348888886433 1 23333322 246899999888898886532 01146799999875 3 23344
Q ss_pred EecCCCCcceEEEecCCCEEEEEEcC---CCeEEEEecCCCc---eEEEEe-e--cccceEEEecCCcccc-ccEEEEEE
Q psy5806 1175 VEEDLAFPNELAIDFKQRRLFWADST---NKRIEYCDFFGRS---RKIVIS-K--VAPYGLSVRQSPGKAF-IVELYWTD 1244 (1332)
Q Consensus 1175 ~~~~l~~p~glaiD~~~~~LY~~d~~---~~~I~~~d~dG~~---~~~~~~-~--~~P~glav~~~~~~~~-~~~lYwtd 1244 (1332)
.. ... ...-.+++++++||+.... +.+|..+++++.. .+.++. . ....++++ . +++|+++-
T Consensus 283 ~~-~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~-------~~~~~lv~~~ 353 (710)
T 2xdw_A 283 ID-NFE-GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVAC-------VRSNFLVLCY 353 (710)
T ss_dssp EC-SSS-SCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEE-------ETTTEEEEEE
T ss_pred eC-CCC-cEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEE-------EcCCEEEEEE
Confidence 33 212 1223577789999988543 4579999998653 255554 2 24556777 4 67777776
Q ss_pred CCCC--EEEEEEecCC
Q psy5806 1245 WEAM--SVVIAREKSD 1258 (1332)
Q Consensus 1245 ~~~~--~V~~~~~~~g 1258 (1332)
...+ +|++++..+|
T Consensus 354 ~~~g~~~l~~~~~~~g 369 (710)
T 2xdw_A 354 LHDVKNTLQLHDLATG 369 (710)
T ss_dssp EETTEEEEEEEETTTC
T ss_pred EECCEEEEEEEECCCC
Confidence 5444 5677776555
No 246
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.99 E-value=0.66 Score=52.79 Aligned_cols=204 Identities=9% Similarity=-0.015 Sum_probs=124.6
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeE---eecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-Cc
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPI---PLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQ 1121 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i---~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~ 1121 (1332)
.+..++|++.++.|.... ..+.|...++..+.....+ .....+....+++.. .+.| ++-...+.|.++++. ++
T Consensus 99 ~v~~~~~s~~~~~l~s~~-~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~l-~s~s~d~~i~~wd~~~~~ 175 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGG-LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQI-VTSSGDTTCALWDIETGQ 175 (340)
T ss_dssp CEEEEEECTTSSEEEEEE-TTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE-TTEE-EEEETTSCEEEEETTTTE
T ss_pred cEEEEEECCCCCEEEEEe-CCCeEEEEECccCCCcceeEEEecCCCccEEEEEECC-CCcE-EEEECCCcEEEEECCCCc
Confidence 467899999888776655 6788888887644322111 112233455666653 3444 455556789999987 44
Q ss_pred eEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCC
Q psy5806 1122 HKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTN 1201 (1332)
Q Consensus 1122 ~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~ 1201 (1332)
....+..-......++++|. +.++.+-... +.|..-++........+...-...+.+++.++++.|..+ ...
T Consensus 176 ~~~~~~~h~~~v~~~~~~~~-~~~l~sg~~d------~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~-s~d 247 (340)
T 1got_B 176 QTTTFTGHTGDVMSLSLAPD-TRLFVSGACD------ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG-SDD 247 (340)
T ss_dssp EEEEECCCSSCEEEEEECTT-SSEEEEEETT------SCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEE-ETT
T ss_pred EEEEEcCCCCceEEEEECCC-CCEEEEEeCC------CcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEE-cCC
Confidence 44445444456789999994 5555554333 457777775544444443334557789999877766654 567
Q ss_pred CeEEEEecCCCceEEEEe----ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEec
Q psy5806 1202 KRIEYCDFFGRSRKIVIS----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRS 1269 (1332)
Q Consensus 1202 ~~I~~~d~dG~~~~~~~~----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~ 1269 (1332)
+.|...|+.......... .....++++ . .++.+..+-...+.|...+..++ .....+..
T Consensus 248 ~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~-----s-~~g~~l~~g~~d~~i~vwd~~~~---~~~~~~~~ 310 (340)
T 1got_B 248 ATCRLFDLRADQELMTYSHDNIICGITSVSF-----S-KSGRLLLAGYDDFNCNVWDALKA---DRAGVLAG 310 (340)
T ss_dssp SCEEEEETTTTEEEEEECCTTCCSCEEEEEE-----C-TTSSEEEEEETTSEEEEEETTTC---CEEEEEEC
T ss_pred CcEEEEECCCCcEEEEEccCCcccceEEEEE-----C-CCCCEEEEECCCCeEEEEEcccC---cEeeEeec
Confidence 789998886543322222 123456777 2 23445555567789999987776 44444443
No 247
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.98 E-value=0.15 Score=58.38 Aligned_cols=212 Identities=11% Similarity=0.004 Sum_probs=127.1
Q ss_pred eEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCC-ceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCce-EE
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTR-IKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQH-KK 1124 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~-~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~-~~ 1124 (1332)
+..++|++.++.|+... ..+.|+..++.++.. ....+......+..|++.+.++.|+.+. ..+.|.++++.... ..
T Consensus 11 i~~~~~s~~~~~l~~~~-~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICP-NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG-TDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp CCEEEECTTSSEEEEEC-SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE-TTSCEEEEEEETTEEEE
T ss_pred eEEEEECCCCCEEEEEe-CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEc-CCCeEEEEECCCCeeee
Confidence 56888998887776654 577888888763321 1222223345678999998777776554 45689999997543 22
Q ss_pred E--EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCce----EEEEecCCCCcceEEEecCCCEEEEEE
Q psy5806 1125 I--LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYR----TVLVEEDLAFPNELAIDFKQRRLFWAD 1198 (1332)
Q Consensus 1125 ~--~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~----~~l~~~~l~~p~glaiD~~~~~LY~~d 1198 (1332)
. +......+..++++|...+|+.+... +.|...+++.... ..+....-..+..|++.++++.|+.+
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~- 160 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGS-------RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG- 160 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETT-------SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE-
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCC-------CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE-
Confidence 2 22334568899999976666666543 3465555555442 11212123456788998877766665
Q ss_pred cCCCeEEEEecC-------------------CCceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1199 STNKRIEYCDFF-------------------GRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1199 ~~~~~I~~~d~d-------------------G~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
...+.|...|+. +.....+.. .....++++ .+.+.+|+.+ ...+.|...+..++
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~l~~~-~~d~~i~i~d~~~~ 234 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCF-----SANGSRVAWV-SHDSTVCLADADKK 234 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEE-----CSSSSEEEEE-ETTTEEEEEEGGGT
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEE-----CCCCCEEEEE-eCCCEEEEEECCCC
Confidence 456788888853 211111111 445667777 2234455544 46788999998877
Q ss_pred CCcceEEEEecCCCCeeeE
Q psy5806 1259 TGQWDVHLIRSNQEDFLNI 1277 (1332)
Q Consensus 1259 ~~~~~~~~~~~~~~~~~~i 1277 (1332)
.....+......+..+
T Consensus 235 ---~~~~~~~~~~~~v~~~ 250 (372)
T 1k8k_C 235 ---MAVATLASETLPLLAV 250 (372)
T ss_dssp ---TEEEEEECSSCCEEEE
T ss_pred ---ceeEEEccCCCCeEEE
Confidence 5555555443333333
No 248
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.93 E-value=0.45 Score=53.20 Aligned_cols=214 Identities=10% Similarity=-0.010 Sum_probs=127.8
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCc-eEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQ-HKK 1124 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~-~~~ 1124 (1332)
.+..+.|.+.++.|+... ..+.|+..++..+.....+ .........|++.+.++.| ++-...+.|.++++... ...
T Consensus 57 ~v~~~~~~~~~~~l~s~s-~d~~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l-~sgs~D~~v~lWd~~~~~~~~ 133 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGS-DDFRIRVFNYNTGEKVVDF-EAHPDYIRSIAVHPTKPYV-LSGSDDLTVKLWNWENNWALE 133 (304)
T ss_dssp CEEEEEEEGGGTEEEEEE-TTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECSSSSEE-EEEETTSCEEEEEGGGTTEEE
T ss_pred cEEEEEEeCCCCEEEEEC-CCCEEEEEECCCCcEEEEE-eCCCCcEEEEEEcCCCCEE-EEECCCCeEEEEECCCCcchh
Confidence 356888999888777665 7788999998755433333 2334567899999766666 45556778999998743 332
Q ss_pred -EEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecC-CCCcceEEEecC-CCEEEEEEcCC
Q psy5806 1125 -ILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEED-LAFPNELAIDFK-QRRLFWADSTN 1201 (1332)
Q Consensus 1125 -~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~-l~~p~glaiD~~-~~~LY~~d~~~ 1201 (1332)
.+..-......++++|..+.++.+-... +.|..-++........+... ....+.+.+.+. ++.+..+-...
T Consensus 134 ~~~~~h~~~v~~v~~~p~~~~~l~sgs~D------~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D 207 (304)
T 2ynn_A 134 QTFEGHEHFVMCVAFNPKDPSTFASGCLD------RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD 207 (304)
T ss_dssp EEECCCCSCEEEEEECTTCTTEEEEEETT------SEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETT
T ss_pred hhhcccCCcEEEEEECCCCCCEEEEEeCC------CeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCC
Confidence 2433334578999999766666665433 45666676444333322222 122334455442 33444455667
Q ss_pred CeEEEEecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEecCCCCeeeE
Q psy5806 1202 KRIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRSNQEDFLNI 1277 (1332)
Q Consensus 1202 ~~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~~~~~~~~i 1277 (1332)
+.|...|+........+. ......+++ . .++.+..+-...+.|...+..++ +....+......+..+
T Consensus 208 ~~i~iWd~~~~~~~~~~~~h~~~v~~~~~-----~-p~~~~l~s~s~Dg~i~iWd~~~~---~~~~~~~~~~~~~~~~ 276 (304)
T 2ynn_A 208 LTIKIWDYQTKSCVATLEGHMSNVSFAVF-----H-PTLPIIISGSEDGTLKIWNSSTY---KVEKTLNVGLERSWCI 276 (304)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEE-----C-SSSSEEEEEETTSCEEEEETTTC---CEEEEECCSSSSEEEE
T ss_pred CeEEEEeCCCCccceeeCCCCCCEEEEEE-----C-CCCCEEEEEcCCCeEEEEECCCC---ceeeeccCCCccEEEE
Confidence 888888886543322222 344456666 1 23335556667789999998777 5555554444444333
No 249
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.88 E-value=0.029 Score=63.51 Aligned_cols=173 Identities=12% Similarity=0.102 Sum_probs=106.8
Q ss_pred cEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEEEecCCCCceEE
Q psy5806 1057 NLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKILVNDLMEPLAI 1136 (1332)
Q Consensus 1057 ~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~~~~~~~~P~~i 1136 (1332)
+.||+.. ..+.|+.++.. |....... ........+++| ..++||++. +.|.+++.+|+...........+.++
T Consensus 148 g~l~vgt-~~~~l~~~d~~-g~~~~~~~-~~~~~~~~~~~d-~~g~l~v~t---~~l~~~d~~g~~~~~~~~~~~~~~~~ 220 (330)
T 3hxj_A 148 GTIYVGS-NDNYLYAINPD-GTEKWRFK-TNDAITSAASIG-KDGTIYFGS---DKVYAINPDGTEKWNFYAGYWTVTRP 220 (330)
T ss_dssp SCEEEEC-TTSEEEEECTT-SCEEEEEE-CSSCCCSCCEEC-TTCCEEEES---SSEEEECTTSCEEEEECCSSCCCSCC
T ss_pred CEEEEEc-CCCEEEEECCC-CCEeEEEe-cCCCceeeeEEc-CCCEEEEEe---CEEEEECCCCcEEEEEccCCcceece
Confidence 4465553 44667777654 33222221 223345677887 467798887 67878886676554443344567889
Q ss_pred EEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEE
Q psy5806 1137 AVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKI 1216 (1332)
Q Consensus 1137 avdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~ 1216 (1332)
++++ +|.||++..+ ..|.+.+.+|.....+-. .-..+..+++| .+++||++. ..+.|.++|.+|.....
T Consensus 221 ~~~~-~g~l~v~t~~-------~gl~~~~~~g~~~~~~~~-~~~~~~~~~~~-~~g~l~v~t-~~ggl~~~d~~g~~~~~ 289 (330)
T 3hxj_A 221 AISE-DGTIYVTSLD-------GHLYAINPDGTEKWRFKT-GKRIESSPVIG-NTDTIYFGS-YDGHLYAINPDGTEKWN 289 (330)
T ss_dssp EECT-TSCEEEEETT-------TEEEEECTTSCEEEEEEC-SSCCCSCCEEC-TTSCEEEEC-TTCEEEEECTTSCEEEE
T ss_pred EECC-CCeEEEEcCC-------CeEEEECCCCCEeEEeeC-CCCccccceEc-CCCeEEEec-CCCCEEEECCCCcEEEE
Confidence 9998 6889888753 358888877765543332 22344567777 467888875 45689999987664333
Q ss_pred EEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEE
Q psy5806 1217 VIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAR 1254 (1332)
Q Consensus 1217 ~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~ 1254 (1332)
... .....++.+ +.++.||+... .+.++...
T Consensus 290 ~~~~~~~~~~~~~------d~~g~l~~gt~-~G~~~~~~ 321 (330)
T 3hxj_A 290 FETGSWIIATPVI------DENGTIYFGTR-NGKFYALF 321 (330)
T ss_dssp EECSSCCCSCCEE------CTTCCEEEECT-TSCEEEEE
T ss_pred EEcCCccccceEE------cCCCEEEEEcC-CCeEEEEe
Confidence 222 444556666 56788888764 45555444
No 250
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=96.86 E-value=0.029 Score=71.59 Aligned_cols=198 Identities=9% Similarity=-0.014 Sum_probs=115.6
Q ss_pred eEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCC------------------CceeeEEEecCCeEEEEcC
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDT------------------IRDNFVIDWVANNIYYIDS 1108 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~------------------~p~glAvDw~~~~LY~td~ 1108 (1332)
+..++|++.+++|.++.. +.|+..++.++.. ..+...+.. .+.++++.+.++.|+++..
T Consensus 116 ~~~~~~SPdG~~la~~~~--~~i~~~~~~~g~~-~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~ 192 (723)
T 1xfd_A 116 LQYAGWGPKGQQLIFIFE--NNIYYCAHVGKQA-IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (723)
T ss_dssp CSBCCBCSSTTCEEEEET--TEEEEESSSSSCC-EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred ccccEECCCCCEEEEEEC--CeEEEEECCCCce-EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEE
Confidence 456778888888887763 6788888764332 233222111 2367888888888887642
Q ss_pred C---------------------------------CceEEEEeeCCceE-EEEecC------CCCceEEEEcCCCcEEEEE
Q psy5806 1109 Q---------------------------------MHTINVARSDGQHK-KILVND------LMEPLAIAVYPRRGLLFYS 1148 (1332)
Q Consensus 1109 ~---------------------------------~~~I~v~~ldG~~~-~~~~~~------~~~P~~iavdp~~g~Lywt 1148 (1332)
. ...|.++++++... ..+... ......++++|...+|+.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~ 272 (723)
T 1xfd_A 193 NDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTW 272 (723)
T ss_dssp ECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEE
T ss_pred CCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEE
Confidence 2 12567777765432 333211 2234679999965555333
Q ss_pred -ecCCCCCCCCCcEEEEecCCCceEEEEecC-CCC----cceEEEecCCCEEEEE-EcCCC------eEEEEe-cCCCc-
Q psy5806 1149 -HWGLYDNSPTTKIEKVYLDGSYRTVLVEED-LAF----PNELAIDFKQRRLFWA-DSTNK------RIEYCD-FFGRS- 1213 (1332)
Q Consensus 1149 -d~~~~~~~~~~~I~r~~ldG~~~~~l~~~~-l~~----p~glaiD~~~~~LY~~-d~~~~------~I~~~d-~dG~~- 1213 (1332)
+.+. ....|+..++++.....++... -.+ +..+++.+++++|+++ ....+ +|+..| .++..
T Consensus 273 ~~~~~----~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 348 (723)
T 1xfd_A 273 LNRAQ----NVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSN 348 (723)
T ss_dssp EETTS----CEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSS
T ss_pred EcCCC----CeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCc
Confidence 3322 2356888898776655554321 122 2378999999999886 44444 688888 56554
Q ss_pred --eEEEEee-cccce-EEEecCCccccccEEEEEECC----CCEEEEEEec
Q psy5806 1214 --RKIVISK-VAPYG-LSVRQSPGKAFIVELYWTDWE----AMSVVIAREK 1256 (1332)
Q Consensus 1214 --~~~~~~~-~~P~g-lav~~~~~~~~~~~lYwtd~~----~~~V~~~~~~ 1256 (1332)
.+.+... ....+ +++ ++++.+||++-.. ...|++++..
T Consensus 349 ~~~~~l~~~~~~~~~~~~~-----spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 349 DNIQSITSGDWDVTKILAY-----DEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp CCCCBSCCSSSCEEEEEEE-----ETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred cceeEeecCCeEEEeeeEE-----cCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 4333321 11122 355 4467888877643 3456777643
No 251
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=96.85 E-value=0.00051 Score=77.42 Aligned_cols=41 Identities=34% Similarity=0.954 Sum_probs=38.2
Q ss_pred CCcccCC-CCCCccccccCCCCccccCCCCeeEccCCccccc
Q psy5806 969 PNACGSN-NGGCSHLCLRNPTNFTCACPTGILLSADRRSCFS 1009 (1332)
Q Consensus 969 ~n~C~~~-nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~ 1009 (1332)
.|+|..+ ||||+|+|.+++++|+|.|+.||.|..|+++|.+
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p 43 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVP 43 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEE
T ss_pred CCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCcccc
Confidence 5899998 9999999999999999999999999999999986
No 252
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.85 E-value=0.19 Score=57.73 Aligned_cols=198 Identities=13% Similarity=0.039 Sum_probs=124.7
Q ss_pred eEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEee---cCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-Cce
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPL---MNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQH 1122 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~---~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~ 1122 (1332)
+.+++|.+. ++|..+ ...++|+..+++.+....+... ...+....|++.+.++.|.. -...+.|.++++. |+.
T Consensus 85 v~~~~~s~d-~~l~~~-s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~s-gs~d~~i~iwd~~~~~~ 161 (344)
T 4gqb_B 85 VADLTWVGE-RGILVA-SDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVS-GSKDICIKVWDLAQQVV 161 (344)
T ss_dssp EEEEEEETT-TEEEEE-ETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEE-EETTSCEEEEETTTTEE
T ss_pred EEEEEEeCC-CeEEEE-ECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEE-EeCCCeEEEEECCCCcE
Confidence 678999986 455544 4788999888875544332221 12346788999987776654 4456789999997 444
Q ss_pred EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEe--cCCCCcceEEEecCCCEEEEEEcC
Q psy5806 1123 KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVE--EDLAFPNELAIDFKQRRLFWADST 1200 (1332)
Q Consensus 1123 ~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~--~~l~~p~glaiD~~~~~LY~~d~~ 1200 (1332)
...+..-......+++.|....++.+-... ..|..-++........+. ..-..+..+++.+.+++++.+-..
T Consensus 162 ~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~ 235 (344)
T 4gqb_B 162 LSSYRAHAAQVTCVAASPHKDSVFLSCSED------NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE 235 (344)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETT------SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEET
T ss_pred EEEEcCcCCceEEEEecCCCCCceeeeccc------cccccccccccceeeeeecceeeccceeeeecCCCCcceEEecc
Confidence 444544345678999999766777775443 457666775444332221 112346678888878888777677
Q ss_pred CCeEEEEecCCC-ceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1201 NKRIEYCDFFGR-SRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1201 ~~~I~~~d~dG~-~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.+.|...|+... ....+.. .....+|++ .+.+..+..+-...++|...|..++
T Consensus 236 dg~v~~wd~~~~~~~~~~~~h~~~v~~v~f-----sp~g~~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 236 NGTVSLVDTKSTSCVLSSAVHSQCVTGLVF-----SPHSVPFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp TSEEEEEESCC--CCEEEECCSSCEEEEEE-----CSSSSCCEEEEETTSCEEEECTTCC
T ss_pred CCcEEEEECCCCcEEEEEcCCCCCEEEEEE-----ccCCCeEEEEEeCCCeEEEEECCCC
Confidence 888999898643 3333332 444567777 2233445555556677877776655
No 253
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.81 E-value=0.32 Score=55.60 Aligned_cols=195 Identities=10% Similarity=0.000 Sum_probs=120.2
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEe-ecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCce--
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIP-LMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQH-- 1122 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~-~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~-- 1122 (1332)
.+..++|++.++.|+.+. ..+.|+..++.++....... ......+..+++...++.|+.+. ..+.|.+++++...
T Consensus 54 ~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~~~~ 131 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCG-TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS-GSRVISICYFEQENDW 131 (372)
T ss_dssp CEEEEEEETTTTEEEEEE-TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETTTTE
T ss_pred cccEEEEeCCCCEEEEEc-CCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEe-CCCEEEEEEecCCCcc
Confidence 467999999888777665 67788888876443222222 22334678899988777776665 45678888887543
Q ss_pred --EEEEecC-CCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecC------------------CCceEEEEecCCCC
Q psy5806 1123 --KKILVND-LMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLD------------------GSYRTVLVEEDLAF 1181 (1332)
Q Consensus 1123 --~~~~~~~-~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ld------------------G~~~~~l~~~~l~~ 1181 (1332)
...+... ...+..|+++|...+|+..... +.|...++. -......+...-..
T Consensus 132 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (372)
T 1k8k_C 132 WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD-------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW 204 (372)
T ss_dssp EEEEEECTTCCSCEEEEEECTTSSEEEEEETT-------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC
T ss_pred eeeeeeecccCCCeeEEEEcCCCCEEEEEcCC-------CCEEEEEcccccccccccccccccccchhhheEecCCCCCe
Confidence 1223222 4568899999965555544432 356665642 11222222222345
Q ss_pred cceEEEecCCCEEEEEEcCCCeEEEEecCCCce-EEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecC
Q psy5806 1182 PNELAIDFKQRRLFWADSTNKRIEYCDFFGRSR-KIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKS 1257 (1332)
Q Consensus 1182 p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~-~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~ 1257 (1332)
...++++++++.|+.+. ..+.|...|+..... ..+.. .....++++ ..++.++.+- ..+.|...+..+
T Consensus 205 v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~------~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 205 VHGVCFSANGSRVAWVS-HDSTVCLADADKKMAVATLASETLPLLAVTF------ITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEECSSSSEEEEEE-TTTEEEEEEGGGTTEEEEEECSSCCEEEEEE------EETTEEEEEE-TTSSCEEEEEET
T ss_pred EEEEEECCCCCEEEEEe-CCCEEEEEECCCCceeEEEccCCCCeEEEEE------ecCCCEEEEE-eCCeEEEEEccC
Confidence 77899998887777664 667899999964433 33322 445577887 1234444444 678888888766
No 254
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.80 E-value=1.8 Score=53.74 Aligned_cols=468 Identities=10% Similarity=0.026 Sum_probs=232.5
Q ss_pred ceEeeccceeEEEecCCCCCcceeeecccccceeEEeecCCCceEEEEecCCCceEEEecC-CCCc-eEEEeCCCCCccc
Q psy5806 709 FLLVSQTDKIRQISLDVEYRYPIVLPLRQLKMVASVDVDTKNEYIYWSDISEKTIERVRFD-MTGR-ERLVVNDLNRTES 786 (1332)
Q Consensus 709 ~ll~s~~~~i~~i~l~~~~~~~~~~~~~~~~~~~~id~d~~~~~lYwsD~~~~~I~r~~~~-g~~~-~~vi~~~~~~p~g 786 (1332)
.|+++....|+.-++....... .+. .....+.+++|.+.+.+|- +-..++.|+..++. +... ...+...-..+..
T Consensus 32 ~l~~~~~~~v~l~~~~~~~~~~-~~~-~h~~~v~~~~~spdg~~la-sg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~ 108 (611)
T 1nr0_A 32 KIQYCNGTSVYTVPVGSLTDTE-IYT-EHSHQTTVAKTSPSGYYCA-SGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKD 108 (611)
T ss_dssp EEEEEETTEEEEEETTCSSCCE-EEC-CCSSCEEEEEECTTSSEEE-EEETTSEEEEEESSSTTCCEEEEEECSSSCEEE
T ss_pred EEEeCCCCEEEEecCCCcccCe-Eec-CCCCceEEEEECCCCcEEE-EEeCCCCEEEeECCCCcceeeEeecccCCceEE
Confidence 4445554555555554322111 111 1234577889998755544 43446777777763 2222 1223333456788
Q ss_pred eeEecCCCeEEEEeCCC---CeEEEEeCCCCceEEEEecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCC-C
Q psy5806 787 IAVDAIGRKIYWTDMNA---QTIMVSDIDGKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDG-T 862 (1332)
Q Consensus 787 lAvD~~~~nLYwtD~~~---~~I~v~~ldG~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG-~ 862 (1332)
+++++.++.|..+.... .+|.+.+. |+....+. .-.....++++.|...+++.+--. . ..|....... +
T Consensus 109 v~fs~dg~~l~~~~~~~~~~~~v~~wd~-~~~~~~l~-gh~~~v~~v~f~p~~~~~l~s~s~-D----~~v~lwd~~~~~ 181 (611)
T 1nr0_A 109 ISWDSESKRIAAVGEGRERFGHVFLFDT-GTSNGNLT-GQARAMNSVDFKPSRPFRIISGSD-D----NTVAIFEGPPFK 181 (611)
T ss_dssp EEECTTSCEEEEEECCSSCSEEEEETTT-CCBCBCCC-CCSSCEEEEEECSSSSCEEEEEET-T----SCEEEEETTTBE
T ss_pred EEECCCCCEEEEEECCCCceeEEEEeeC-CCCcceec-CCCCCceEEEECCCCCeEEEEEeC-C----CeEEEEECCCCe
Confidence 99999888887665433 24444442 22222221 122456788898875554444322 2 2444433221 1
Q ss_pred CcEEEecccccCceeEEeCCCCCeEEEEeCCCCeEEEEccC-CCceeEEec----cCCc---ceEEEEe-CCEEEEEeCC
Q psy5806 863 NRAVFETEVIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLA-TGRAKRAYA----VQSH---PYTLTVL-DYYVYWTDVQ 933 (1332)
Q Consensus 863 ~~~~l~~~l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~d-G~~~~~l~~----~~~~---P~~la~~-~~~iywtD~~ 933 (1332)
....+...-.....+++.+++ +.| .+-...+.|..-++. |.....+.. ...| ..++++. ++....+-..
T Consensus 182 ~~~~l~~H~~~V~~v~fspdg-~~l-as~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~ 259 (611)
T 1nr0_A 182 FKSTFGEHTKFVHSVRYNPDG-SLF-ASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA 259 (611)
T ss_dssp EEEEECCCSSCEEEEEECTTS-SEE-EEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET
T ss_pred EeeeeccccCceEEEEECCCC-CEE-EEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeC
Confidence 112222124456678888877 444 443445667666653 433333311 0123 3566665 2333334444
Q ss_pred CCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccccCcc
Q psy5806 934 HSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRTRE 1013 (1332)
Q Consensus 934 ~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~ 1013 (1332)
++.|..-+..+++.+.. +....... . . .+ .+.. ....
T Consensus 260 D~~v~lWd~~~~~~~~~---------~~~~~~~~------~---~--~~----------------~~~~-------~~~~ 296 (611)
T 1nr0_A 260 DKTIKIWNVATLKVEKT---------IPVGTRIE------D---Q--QL----------------GIIW-------TKQA 296 (611)
T ss_dssp TSEEEEEETTTTEEEEE---------EECCSSGG------G---C--EE----------------EEEE-------CSSC
T ss_pred CCeEEEEeCCCCceeee---------ecCCCCcc------c---e--eE----------------EEEE-------cCCE
Confidence 55555545444422211 00000000 0 0 00 0000 0111
Q ss_pred eEEEEeecceEEEEeCCCCCCCCcccccC-CccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCce
Q psy5806 1014 FLLYTSRFGVIRRISLDTADLLPVTLPFP-EYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRD 1092 (1332)
Q Consensus 1014 ~ll~~~~~~~i~~i~l~~~~~~~~~~pi~-~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~ 1092 (1332)
++..+.... |+...+.... ....+. ....+.+++|++.++.|+-+. ..+.|+..++..+.....+.........
T Consensus 297 l~s~s~d~~-i~~~~~~~~~---~~~~~~gh~~~v~~l~~spdg~~l~s~s-~D~~v~~Wd~~~~~~~~~~~~~h~~~v~ 371 (611)
T 1nr0_A 297 LVSISANGF-INFVNPELGS---IDQVRYGHNKAITALSSSADGKTLFSAD-AEGHINSWDISTGISNRVFPDVHATMIT 371 (611)
T ss_dssp EEEEETTCC-EEEEETTTTE---EEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCCEEECSSCSCSSCEE
T ss_pred EEEEeCCCc-EEEEeCCCCC---cceEEcCCCCCEEEEEEeCCCCEEEEEe-CCCcEEEEECCCCceeeecccCCcceEE
Confidence 112222233 4444433211 111111 123467999999888777665 6788999998744322221111223456
Q ss_pred eeEEEecCCeEEEEcCCCceEEEEeeCCceEE----EEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCC
Q psy5806 1093 NFVIDWVANNIYYIDSQMHTINVARSDGQHKK----ILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDG 1168 (1332)
Q Consensus 1093 glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~----~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG 1168 (1332)
++++.. .+.|+ +-...+.+.++++.+.... ....-...|.++++.|....++.+... .|...+ .+
T Consensus 372 ~~~~s~-~~~l~-s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~--------~v~~~~-~~ 440 (611)
T 1nr0_A 372 GIKTTS-KGDLF-TVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYK--------HIAIYS-HG 440 (611)
T ss_dssp EEEECT-TSCEE-EEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESS--------EEEEEE-TT
T ss_pred EEEECC-CCcEE-EEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCc--------eEEEEe-CC
Confidence 777763 44554 4344567888887653211 011122468899999855466665322 233333 34
Q ss_pred CceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEE--e-ecccceEEEecCCccccccEEEEEEC
Q psy5806 1169 SYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVI--S-KVAPYGLSVRQSPGKAFIVELYWTDW 1245 (1332)
Q Consensus 1169 ~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~--~-~~~P~glav~~~~~~~~~~~lYwtd~ 1245 (1332)
. ...+ . .-..+..+++.++++.|..+ ...+.|...++++.....+. . .....+|++ .+.+.+|. +-.
T Consensus 441 ~-~~~~-~-~~~~v~~va~spdg~~lasg-s~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~f-----spdg~~la-s~s 510 (611)
T 1nr0_A 441 K-LTEV-P-ISYNSSCVALSNDKQFVAVG-GQDSKVHVYKLSGASVSEVKTIVHPAEITSVAF-----SNNGAFLV-ATD 510 (611)
T ss_dssp E-EEEE-E-CSSCEEEEEECTTSCEEEEE-ETTSEEEEEEEETTEEEEEEEEECSSCEEEEEE-----CTTSSEEE-EEE
T ss_pred c-eeee-e-cCCCceEEEEeCCCCEEEEe-CCCCeEEEEEccCCceeeeeccCCCCceEEEEE-----CCCCCEEE-EEc
Confidence 3 2222 2 12456789999888777665 46678998888765432221 1 455677888 33445554 444
Q ss_pred CCCEEEEEEecC
Q psy5806 1246 EAMSVVIAREKS 1257 (1332)
Q Consensus 1246 ~~~~V~~~~~~~ 1257 (1332)
..+.|...+..+
T Consensus 511 ~d~~v~~w~~~~ 522 (611)
T 1nr0_A 511 QSRKVIPYSVAN 522 (611)
T ss_dssp TTSCEEEEEGGG
T ss_pred CCCCEEEEEcCC
Confidence 667888888765
No 255
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.80 E-value=0.41 Score=55.32 Aligned_cols=235 Identities=10% Similarity=-0.046 Sum_probs=135.5
Q ss_pred ceEEEEeecceEEEEeCCCCCCCC---cccccCC-ccceEEEEEeCC----C---cEEEEEeCCCCeEEEEECCCCCC--
Q psy5806 1013 EFLLYTSRFGVIRRISLDTADLLP---VTLPFPE-YMSSIFFDYHYS----K---NLIYFADMRSGNLRTFDMSDSTR-- 1079 (1332)
Q Consensus 1013 ~~ll~~~~~~~i~~i~l~~~~~~~---~~~pi~~-~~~~~~id~d~~----~---~~lY~sd~~~~~I~~~~l~~g~~-- 1079 (1332)
.+|+....+..|+..+++...... ....+.+ ...+..++|.+. + +.|+.+. ..+.|+..++..+..
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~-~dg~i~iw~~~~~~~~~ 105 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS-FSGDLLFYRITREDETK 105 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE-TTSCEEEEEEEECTTTC
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEc-CCCCEEEEEccCCcccc
Confidence 455555544336666665443111 1111222 234678999987 5 5555554 678888888764443
Q ss_pred ---ceeEeecC-----CCCceeeEEE----ecCCe-EEEEcCCCceEEEEeeCC-------ceEE-----EE-------e
Q psy5806 1080 ---IKPIPLMN-----DTIRDNFVID----WVANN-IYYIDSQMHTINVARSDG-------QHKK-----IL-------V 1127 (1332)
Q Consensus 1080 ---~~~i~~~~-----~~~p~glAvD----w~~~~-LY~td~~~~~I~v~~ldG-------~~~~-----~~-------~ 1127 (1332)
...+. .. ...+..+++. +.++. |+.+. ..+.|.++++.. +... .+ .
T Consensus 106 ~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (397)
T 1sq9_A 106 KVIFEKLD-LLDSDMKKHSFWALKWGASNDRLLSHRLVATD-VKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPM 183 (397)
T ss_dssp CEEEEEEC-CSCTTGGGSCEEEEEEECCC----CEEEEEEE-TTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSS
T ss_pred cccceeec-ccccccCCCcEEEEEEeeccCCCCceEEEEEe-CCCcEEEEeCCccccccccceeeccCcceeeeeecccc
Confidence 22221 22 2567889998 77777 65554 456888888875 2222 22 1
Q ss_pred cCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEec---C---CCCcceEEEecCCCEEEEEEcCC
Q psy5806 1128 NDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEE---D---LAFPNELAIDFKQRRLFWADSTN 1201 (1332)
Q Consensus 1128 ~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~---~---l~~p~glaiD~~~~~LY~~d~~~ 1201 (1332)
.....+..++++|.. ++.+.... +.|...++........+.. . -.....|+++++++.|+.+. ..
T Consensus 184 ~~~~~i~~~~~~~~~--~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~-~d 254 (397)
T 1sq9_A 184 TPSQFATSVDISERG--LIATGFNN------GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH-DS 254 (397)
T ss_dssp SSCCCCCEEEECTTS--EEEEECTT------SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE-EE
T ss_pred CCCCCceEEEECCCc--eEEEEeCC------CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEe-cC
Confidence 234568999999955 44443332 5788888875554444443 2 35677899998877777664 44
Q ss_pred ---CeEEEEecCCCce-EEEE--------------eecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcce
Q psy5806 1202 ---KRIEYCDFFGRSR-KIVI--------------SKVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWD 1263 (1332)
Q Consensus 1202 ---~~I~~~d~dG~~~-~~~~--------------~~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~ 1263 (1332)
+.|...|+..... ..+. ......+|++ .+.+.+|+ +-...+.|...+..++ ..
T Consensus 255 ~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~l~-~~~~dg~i~iwd~~~~---~~ 325 (397)
T 1sq9_A 255 NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF-----NDSGETLC-SAGWDGKLRFWDVKTK---ER 325 (397)
T ss_dssp TTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEE-----CSSSSEEE-EEETTSEEEEEETTTT---EE
T ss_pred CCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEE-----CCCCCEEE-EEeCCCeEEEEEcCCC---ce
Confidence 6899988864332 2221 1223456777 22344444 4457789999998777 55
Q ss_pred EEEEe
Q psy5806 1264 VHLIR 1268 (1332)
Q Consensus 1264 ~~~~~ 1268 (1332)
...+.
T Consensus 326 ~~~~~ 330 (397)
T 1sq9_A 326 ITTLN 330 (397)
T ss_dssp EEEEE
T ss_pred eEEEe
Confidence 44444
No 256
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.77 E-value=0.016 Score=69.93 Aligned_cols=114 Identities=11% Similarity=-0.000 Sum_probs=79.2
Q ss_pred CCCceeeEEEecCCeEEEEcCC---------------------CceEEEEeeCCce-------EEE-Eec----------
Q psy5806 1088 DTIRDNFVIDWVANNIYYIDSQ---------------------MHTINVARSDGQH-------KKI-LVN---------- 1128 (1332)
Q Consensus 1088 ~~~p~glAvDw~~~~LY~td~~---------------------~~~I~v~~ldG~~-------~~~-~~~---------- 1128 (1332)
...|+++++++.++.||++-.+ .+.|..+..++.. -.+ +..
T Consensus 383 mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~ 462 (592)
T 4a9v_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred ccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccc
Confidence 4489999999999999998433 2567777665421 122 211
Q ss_pred -----------CCCCceEEEEcCCCcEEEE-EecCCC-----CCCCCCcEEEEecCCCceEEEEec-CCCCcceEEEecC
Q psy5806 1129 -----------DLMEPLAIAVYPRRGLLFY-SHWGLY-----DNSPTTKIEKVYLDGSYRTVLVEE-DLAFPNELAIDFK 1190 (1332)
Q Consensus 1129 -----------~~~~P~~iavdp~~g~Lyw-td~~~~-----~~~~~~~I~r~~ldG~~~~~l~~~-~l~~p~glaiD~~ 1190 (1332)
.++.|..|++|+ .|.||+ ||.+.. .......+++.+.+......++.. ....|+||++.++
T Consensus 463 ~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD 541 (592)
T 4a9v_A 463 KGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPD 541 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTT
T ss_pred ccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCC
Confidence 268899999999 699999 774310 011234799998854455555442 3467999999999
Q ss_pred CCEEEEEEcCCC
Q psy5806 1191 QRRLFWADSTNK 1202 (1332)
Q Consensus 1191 ~~~LY~~d~~~~ 1202 (1332)
++.||++-++-+
T Consensus 542 ~ktLfV~vQHPG 553 (592)
T 4a9v_A 542 QKTLFVGIQHPG 553 (592)
T ss_dssp SSEEEEEEESTT
T ss_pred CCEEEEEEeCCC
Confidence 999999987655
No 257
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.75 E-value=0.15 Score=64.90 Aligned_cols=222 Identities=10% Similarity=0.021 Sum_probs=127.3
Q ss_pred EEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCC---------------eEEEEECCCCCCceeEeecCC
Q psy5806 1024 IRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSG---------------NLRTFDMSDSTRIKPIPLMND 1088 (1332)
Q Consensus 1024 i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~---------------~I~~~~l~~g~~~~~i~~~~~ 1088 (1332)
|+.+++++...... .+... ...+++|.+.++.||++..... .|++.++.++.....++....
T Consensus 153 i~v~d~~tg~~~~~--~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~ 229 (710)
T 2xdw_A 153 IKFMKVDGAKELPD--VLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP 229 (710)
T ss_dssp EEEEETTTTEEEEE--EEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT
T ss_pred EEEEECCCCCCCcc--cccCc-ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccC
Confidence 66677664332111 11111 1356889999999999874432 389989864432223332222
Q ss_pred ---CCceeeEEEecCCeEEEEcC-C---CceEEEEeeCC------c--eEEEEecCCCCceEEEEcCCCcEEEEEecCCC
Q psy5806 1089 ---TIRDNFVIDWVANNIYYIDS-Q---MHTINVARSDG------Q--HKKILVNDLMEPLAIAVYPRRGLLFYSHWGLY 1153 (1332)
Q Consensus 1089 ---~~p~glAvDw~~~~LY~td~-~---~~~I~v~~ldG------~--~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~ 1153 (1332)
....++++.+.++.|+++.. . ...|.++++++ . ..+.+........ -.++|..+.||+.....
T Consensus 230 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~- 307 (710)
T 2xdw_A 230 DEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFKTNRH- 307 (710)
T ss_dssp TCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEEECTT-
T ss_pred CCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEEECCC-
Confidence 12458889888999888643 2 45788889874 2 2333433332222 34777778888875322
Q ss_pred CCCCCCcEEEEecCCCc---eEEEEecCC-CCcceEEEecCCCEEEEEEcCCC--eEEEEec-CCCceEEEEe-ecccce
Q psy5806 1154 DNSPTTKIEKVYLDGSY---RTVLVEEDL-AFPNELAIDFKQRRLFWADSTNK--RIEYCDF-FGRSRKIVIS-KVAPYG 1225 (1332)
Q Consensus 1154 ~~~~~~~I~r~~ldG~~---~~~l~~~~l-~~p~glaiD~~~~~LY~~d~~~~--~I~~~d~-dG~~~~~~~~-~~~P~g 1225 (1332)
....+|+++++++.. .+.++...- ....++++. .+++|+++-...+ +|...++ +|...+.+.. .....+
T Consensus 308 --~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~ 384 (710)
T 2xdw_A 308 --SPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVG 384 (710)
T ss_dssp --CTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEE
T ss_pred --CCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE-cCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEE
Confidence 235689999998764 245554321 134466665 4677877765544 6888888 6664333321 222334
Q ss_pred EEEecCCccccccEEEEEEC---CCCEEEEEEecCC
Q psy5806 1226 LSVRQSPGKAFIVELYWTDW---EAMSVVIAREKSD 1258 (1332)
Q Consensus 1226 lav~~~~~~~~~~~lYwtd~---~~~~V~~~~~~~g 1258 (1332)
++. + +.+..|+++-. .-.+|+.++..+|
T Consensus 385 ~~~--s---~d~~~l~~~~ss~~~P~~i~~~d~~tg 415 (710)
T 2xdw_A 385 YSG--Q---KKDTEIFYQFTSFLSPGIIYHCDLTKE 415 (710)
T ss_dssp EEC--C---TTCSEEEEEEECSSCCCEEEEEETTSS
T ss_pred Eec--C---CCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 444 2 23445655432 3467888887666
No 258
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.73 E-value=0.091 Score=59.91 Aligned_cols=154 Identities=8% Similarity=-0.068 Sum_probs=94.3
Q ss_pred cceEEEEEeCCCcEEEEEeC--------CCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCC----Cce
Q psy5806 1045 MSSIFFDYHYSKNLIYFADM--------RSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQ----MHT 1112 (1332)
Q Consensus 1045 ~~~~~id~d~~~~~lY~sd~--------~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~----~~~ 1112 (1332)
..+.++.+ .+++|+|+.. ..+.|+.+++.++. ...+ ..+..+++.+.++.|+++... ...
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~ 86 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA-RRFI-----ENATMPRISPDGKKIAFMRANEEKKVSE 86 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC-EEEE-----ESCEEEEECTTSSEEEEEEEETTTTEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc-eEEc-----ccCCCeEECCCCCEEEEEEeccCCCcce
Confidence 33455556 5567766531 14568888877432 2222 456778888889988887532 345
Q ss_pred EEEEeeCCceEEEEecCCCCceEEEEcCCCcEEEEEecCC--------------------CCCCCCCcEEEEecCCCce-
Q psy5806 1113 INVARSDGQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGL--------------------YDNSPTTKIEKVYLDGSYR- 1171 (1332)
Q Consensus 1113 I~v~~ldG~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~--------------------~~~~~~~~I~r~~ldG~~~- 1171 (1332)
|.++++++.....+..... ..+++.+|...+|+++.... +.......|++.++++...
T Consensus 87 l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 87 IWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp EEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred EEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence 7788887654443322222 78899999877888875320 0000135799999987765
Q ss_pred EEEEecCCCCcceEEEecCCCEEEEEEcC--------CCeEEEEecCCC
Q psy5806 1172 TVLVEEDLAFPNELAIDFKQRRLFWADST--------NKRIEYCDFFGR 1212 (1332)
Q Consensus 1172 ~~l~~~~l~~p~glaiD~~~~~LY~~d~~--------~~~I~~~d~dG~ 1212 (1332)
..+.. . ....+++.+++ .+|.+... ...|+.++ .|.
T Consensus 166 ~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~ 209 (347)
T 2gop_A 166 EEFEK-P--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGK 209 (347)
T ss_dssp EEEEE-E--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTE
T ss_pred eeecC-C--CcccccCCCCe-EEEEEecccccccccccccEEEeC-CCc
Confidence 45544 3 56688898877 66655432 33688887 443
No 259
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.63 E-value=0.3 Score=57.09 Aligned_cols=197 Identities=10% Similarity=-0.056 Sum_probs=121.6
Q ss_pred EEEEeCCCcEEEEEeCCCCeEEEEECCCCCCc-e--eEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCc----
Q psy5806 1049 FFDYHYSKNLIYFADMRSGNLRTFDMSDSTRI-K--PIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQ---- 1121 (1332)
Q Consensus 1049 ~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~-~--~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~---- 1121 (1332)
.+++++....++++-...|.|...+++..... . ..+....+.+..|++.+..+++.++-...+.|.++++...
T Consensus 39 ~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~ 118 (402)
T 2aq5_A 39 FCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL 118 (402)
T ss_dssp SEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS
T ss_pred cEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc
Confidence 35566666566665567788888887532111 1 1111223467888888734555556556789999999743
Q ss_pred ----eEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEE--ecCCCCcceEEEecCCCEEE
Q psy5806 1122 ----HKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLV--EEDLAFPNELAIDFKQRRLF 1195 (1332)
Q Consensus 1122 ----~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~--~~~l~~p~glaiD~~~~~LY 1195 (1332)
....+..-......|+++|....++++-... +.|..-++........+ ...-.....|++.++++.|+
T Consensus 119 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 192 (402)
T 2aq5_A 119 PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD------NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALIC 192 (402)
T ss_dssp CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT------SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEE
T ss_pred ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC------CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEE
Confidence 2333444446789999999654555554333 46777787665544444 22334567889998777777
Q ss_pred EEEcCCCeEEEEecCCCceEEEE-e---ecccceEEEecCCccccccEEEEEE---CCCCEEEEEEecCC
Q psy5806 1196 WADSTNKRIEYCDFFGRSRKIVI-S---KVAPYGLSVRQSPGKAFIVELYWTD---WEAMSVVIAREKSD 1258 (1332)
Q Consensus 1196 ~~d~~~~~I~~~d~dG~~~~~~~-~---~~~P~glav~~~~~~~~~~~lYwtd---~~~~~V~~~~~~~g 1258 (1332)
.+. ..+.|...|+........+ . ...+..+++ ..++.++.+- ...+.|...+..++
T Consensus 193 ~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~g~~~~~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 193 TSC-RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF------VSEGKILTTGFSRMSERQVALWDTKHL 255 (402)
T ss_dssp EEE-TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEE------CSTTEEEEEEECTTCCEEEEEEETTBC
T ss_pred EEe-cCCcEEEEeCCCCceeeeeccCCCCCcceEEEE------cCCCcEEEEeccCCCCceEEEEcCccc
Confidence 664 6688999998754433222 2 334677777 1234555554 56788888887765
No 260
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.60 E-value=0.64 Score=54.19 Aligned_cols=226 Identities=10% Similarity=0.033 Sum_probs=127.0
Q ss_pred ceEEEEeecceEEEEeCCCCCCCCcccccCCccceEEE-EEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCc
Q psy5806 1013 EFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFF-DYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIR 1091 (1332)
Q Consensus 1013 ~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~i-d~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p 1091 (1332)
.+|+....+..|+..++........ +... ....+ .+.+.++.|... ...+.|...++..+ ............+
T Consensus 69 ~~l~~~~~d~~v~i~d~~~~~~~~~---~~~~-~~~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~-~~~~~~~~h~~~v 142 (420)
T 3vl1_A 69 SHLYKARLDGHDFLFNTIIRDGSKM---LKRA-DYTAVDTAKLQMRRFILG-TTEGDIKVLDSNFN-LQREIDQAHVSEI 142 (420)
T ss_dssp TTEEEEEETTEEEEEECCSEETTTT---SCSC-CEEEEEEECSSSCEEEEE-ETTSCEEEECTTSC-EEEEETTSSSSCE
T ss_pred CeEEEEEcCCcEEEEEecccceeeE---EecC-CceEEEEEecCCCEEEEE-ECCCCEEEEeCCCc-ceeeecccccCcc
Confidence 3444444443266666553322211 1122 23333 456666655554 46788988887632 2222222334567
Q ss_pred eeeEEEecCCeEEEEcCCCceEEEEeeC-CceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCc
Q psy5806 1092 DNFVIDWVANNIYYIDSQMHTINVARSD-GQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSY 1170 (1332)
Q Consensus 1092 ~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~ 1170 (1332)
..|++.+.++.|+.+ ...+.|.++++. ++....+..-......|+++|...+|+.+... +.|..-++....
T Consensus 143 ~~~~~~~~~~~l~s~-s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-------~~v~iwd~~~~~ 214 (420)
T 3vl1_A 143 TKLKFFPSGEALISS-SQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLD-------GTIRLWECGTGT 214 (420)
T ss_dssp EEEEECTTSSEEEEE-ETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETT-------SCEEEEETTTTE
T ss_pred EEEEECCCCCEEEEE-eCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCC-------CcEEEeECCCCc
Confidence 889998877766544 456789999997 55555554444668899999976666654432 356666665444
Q ss_pred eEEEEecC------------------------CCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe---eccc
Q psy5806 1171 RTVLVEED------------------------LAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS---KVAP 1223 (1332)
Q Consensus 1171 ~~~l~~~~------------------------l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~---~~~P 1223 (1332)
....+... ......++++++++.|+.+ ...+.|...|+.......... ....
T Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~v 293 (420)
T 3vl1_A 215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAG-HVSGVITVHNVFSKEQTIQLPSKFTCSC 293 (420)
T ss_dssp EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEE-ETTSCEEEEETTTCCEEEEECCTTSSCE
T ss_pred eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEE-cCCCeEEEEECCCCceeEEcccccCCCc
Confidence 33333211 1222344556555555544 567789998986544333332 3456
Q ss_pred ceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1224 YGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1224 ~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.+|++ .+.+..++++-...+.|...+..++
T Consensus 294 ~~~~~-----~~~~~~~l~~g~~dg~i~vwd~~~~ 323 (420)
T 3vl1_A 294 NSLTV-----DGNNANYIYAGYENGMLAQWDLRSP 323 (420)
T ss_dssp EEEEE-----CSSCTTEEEEEETTSEEEEEETTCT
T ss_pred eeEEE-----eCCCCCEEEEEeCCCeEEEEEcCCC
Confidence 67777 2233324445556688888887765
No 261
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.59 E-value=0.18 Score=56.93 Aligned_cols=193 Identities=10% Similarity=0.004 Sum_probs=118.1
Q ss_pred cceEEEEEeCCCc-EEEEEeCCCCeEEEEEC-CCCCCceeEeec--CCCCceeeEEEecCCeEEEEcCCCceEEEEeeCC
Q psy5806 1045 MSSIFFDYHYSKN-LIYFADMRSGNLRTFDM-SDSTRIKPIPLM--NDTIRDNFVIDWVANNIYYIDSQMHTINVARSDG 1120 (1332)
Q Consensus 1045 ~~~~~id~d~~~~-~lY~sd~~~~~I~~~~l-~~g~~~~~i~~~--~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG 1120 (1332)
..+..++|++.++ .|+... ..+.|+..++ ..+ .. ..+.. ....+..|++.. ++.|+ +-...+.|.++++..
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~-~~-~~~~~~~~~~~v~~l~~~~-~~~l~-s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGT-VQGEILKVDLIGSP-SF-QALTNNEANLGICRICKYG-DDKLI-AASWDGLIEVIDPRN 131 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEE-TTSCEEEECSSSSS-SE-EECBSCCCCSCEEEEEEET-TTEEE-EEETTSEEEEECHHH
T ss_pred CceEEEEECCCCCcEEEEEc-CCCeEEEEEeccCC-ce-EeccccCCCCceEEEEeCC-CCEEE-EEcCCCeEEEEcccc
Confidence 3567899999888 777665 6788999988 633 22 22223 344678899987 55554 545567899998763
Q ss_pred ---------ceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCC-Cc--eEEEEecCCCCcceEEEe
Q psy5806 1121 ---------QHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDG-SY--RTVLVEEDLAFPNELAID 1188 (1332)
Q Consensus 1121 ---------~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG-~~--~~~l~~~~l~~p~glaiD 1188 (1332)
............+.+++++|. + |+.+... +.|...++.. .. ........-..+..+++.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~-l~~~~~d-------~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~ 202 (342)
T 1yfq_A 132 YGDGVIAVKNLNSNNTKVKNKIFTMDTNSS-R-LIVGMNN-------SQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL 202 (342)
T ss_dssp HTTBCEEEEESCSSSSSSCCCEEEEEECSS-E-EEEEEST-------TEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC
T ss_pred cccccccccCCeeeEEeeCCceEEEEecCC-c-EEEEeCC-------CeEEEEECCccccccceeeecCCCCceeEEEEC
Confidence 211111123356889999985 3 5554332 4678778765 32 222222223456788898
Q ss_pred c-CCCEEEEEEcCCCeEEEEecCCC------ceEEEEe--ec---------ccceEEEecCCccccccEEEEEECCCCEE
Q psy5806 1189 F-KQRRLFWADSTNKRIEYCDFFGR------SRKIVIS--KV---------APYGLSVRQSPGKAFIVELYWTDWEAMSV 1250 (1332)
Q Consensus 1189 ~-~~~~LY~~d~~~~~I~~~d~dG~------~~~~~~~--~~---------~P~glav~~~~~~~~~~~lYwtd~~~~~V 1250 (1332)
+ +++.|+.+ ...+.|...+++.. ....... .. ...++++ .+.+.+|+ +-...+.|
T Consensus 203 ~~~~~~l~~~-~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----s~~~~~l~-~~~~dg~i 275 (342)
T 1yfq_A 203 PKEQEGYACS-SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEF-----SPRHKFLY-TAGSDGII 275 (342)
T ss_dssp SGGGCEEEEE-ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEE-----CTTTCCEE-EEETTSCE
T ss_pred CCCCCEEEEE-ecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEE-----cCCCCEEE-EecCCceE
Confidence 7 66666655 45778888777643 3222222 22 5567777 22344454 44467889
Q ss_pred EEEEecCC
Q psy5806 1251 VIAREKSD 1258 (1332)
Q Consensus 1251 ~~~~~~~g 1258 (1332)
...+..++
T Consensus 276 ~vwd~~~~ 283 (342)
T 1yfq_A 276 SCWNLQTR 283 (342)
T ss_dssp EEEETTTT
T ss_pred EEEcCccH
Confidence 99998777
No 262
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.58 E-value=0.12 Score=66.16 Aligned_cols=220 Identities=15% Similarity=0.106 Sum_probs=122.5
Q ss_pred EEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCC-------------eEEEEECCCCCCceeEeecCCC-
Q psy5806 1024 IRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSG-------------NLRTFDMSDSTRIKPIPLMNDT- 1089 (1332)
Q Consensus 1024 i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~-------------~I~~~~l~~g~~~~~i~~~~~~- 1089 (1332)
|+.+++++..... ..+.... ..+++|.+. +.||++..... .|++.++.++.....++.....
T Consensus 191 i~v~dl~tg~~~~--~~~~~~~-~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~ 266 (741)
T 1yr2_A 191 VKFVGVADGKPLA--DELKWVK-FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL 266 (741)
T ss_dssp EEEEETTTCCEEE--EEEEEEE-SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC
T ss_pred EEEEECCCCCCCC--ccCCCce-eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC
Confidence 6777776443211 1111111 136788999 89999864332 4888887533322233322222
Q ss_pred --CceeeEEEecCCeEEEEcC----CCceEEEEeeCCc--e-EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCc
Q psy5806 1090 --IRDNFVIDWVANNIYYIDS----QMHTINVARSDGQ--H-KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTK 1160 (1332)
Q Consensus 1090 --~p~glAvDw~~~~LY~td~----~~~~I~v~~ldG~--~-~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~ 1160 (1332)
...++++++.++.|+++.. ....|.++++++. . .+.+.......... ++|..+.||+..... ....+
T Consensus 267 ~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~---~~~~~ 342 (741)
T 1yr2_A 267 PKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDG---APLKK 342 (741)
T ss_dssp TTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTT---CTTCE
T ss_pred CeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCC---CCCCE
Confidence 2457888888888887643 2457888998754 2 33344433333333 457777888775322 23578
Q ss_pred EEEEecCCC--ceEEEEecCCCCcceEEEecCCCEEEEEEcCC--CeEEEEecCCCceEEEE-e-ecccceEEEecCCcc
Q psy5806 1161 IEKVYLDGS--YRTVLVEEDLAFPNELAIDFKQRRLFWADSTN--KRIEYCDFFGRSRKIVI-S-KVAPYGLSVRQSPGK 1234 (1332)
Q Consensus 1161 I~r~~ldG~--~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~--~~I~~~d~dG~~~~~~~-~-~~~P~glav~~~~~~ 1234 (1332)
|+++++++. ..+.++...-....+++++ +++|+++.... .+|+.++++|...+.+. + .....+++. |
T Consensus 343 l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~--s--- 415 (741)
T 1yr2_A 343 IVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSG--R--- 415 (741)
T ss_dssp EEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEEC--C---
T ss_pred EEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeec--C---
Confidence 999999873 4455554332223355555 67888876544 45788888776443332 1 122234444 2
Q ss_pred ccccEEEEEEC---CCCEEEEEEecCC
Q psy5806 1235 AFIVELYWTDW---EAMSVVIAREKSD 1258 (1332)
Q Consensus 1235 ~~~~~lYwtd~---~~~~V~~~~~~~g 1258 (1332)
+.++.|+++-. .-++|+.++..++
T Consensus 416 ~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 416 PGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp BTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred CCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 23344554432 3356777776655
No 263
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.56 E-value=0.41 Score=55.30 Aligned_cols=159 Identities=11% Similarity=0.078 Sum_probs=100.1
Q ss_pred cceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCC--eEEEEcCCCceEEEEeeC-Cc
Q psy5806 1045 MSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVAN--NIYYIDSQMHTINVARSD-GQ 1121 (1332)
Q Consensus 1045 ~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~--~LY~td~~~~~I~v~~ld-G~ 1121 (1332)
..+..++|.+.++.++++-...+.|...++..+.....+ .....+..+++.+.+. .+.++....+.|.++++. ++
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 177 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF--NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS 177 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceec--cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc
Confidence 357899999955556666557889999998744332222 2334566777766543 244555556789999987 44
Q ss_pred eEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCc-eEEEE---------------ecCCCCcceE
Q psy5806 1122 HKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSY-RTVLV---------------EEDLAFPNEL 1185 (1332)
Q Consensus 1122 ~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~-~~~l~---------------~~~l~~p~gl 1185 (1332)
....+.........|+++|...+|+.+-... +.|...++.... ....+ ...-.....+
T Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 178 CSHILQGHRQEILAVSWSPRYDYILATASAD------SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp CCEEECCCCSCEEEEEECSSCTTEEEEEETT------SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred eeeeecCCCCcEEEEEECCCCCcEEEEEcCC------CcEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 4444544445678999999777666664433 457766764433 11111 1112346678
Q ss_pred EEecCCCEEEEEEcCCCeEEEEecCCC
Q psy5806 1186 AIDFKQRRLFWADSTNKRIEYCDFFGR 1212 (1332)
Q Consensus 1186 aiD~~~~~LY~~d~~~~~I~~~d~dG~ 1212 (1332)
++.++++.|+.+. ..+.|...|+...
T Consensus 252 ~~~~~~~~l~~~~-~dg~i~vwd~~~~ 277 (408)
T 4a11_B 252 CFTSDGLHLLTVG-TDNRMRLWNSSNG 277 (408)
T ss_dssp EECTTSSEEEEEE-TTSCEEEEETTTC
T ss_pred EEcCCCCEEEEec-CCCeEEEEECCCC
Confidence 9998877777664 5678999898744
No 264
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.54 E-value=0.62 Score=54.74 Aligned_cols=216 Identities=7% Similarity=0.019 Sum_probs=128.2
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEE-
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKK- 1124 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~- 1124 (1332)
.+..++|++....|.-+ ...+.|...++..+....++. .....+..|++++.++.| ++-...+.|.++++.+....
T Consensus 110 ~V~~~~~~p~~~~l~s~-s~Dg~i~vwd~~~~~~~~~l~-~h~~~V~~v~~~~~~~~l-~sgs~D~~i~iwd~~~~~~~~ 186 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSA-SEDATIKVWDYETGDFERTLK-GHTDSVQDISFDHSGKLL-ASCSADMTIKLWDFQGFECIR 186 (410)
T ss_dssp CEEEEEECSSSSEEEEE-ESSSCEEEEETTTCCCCEEEC-CCSSCEEEEEECTTSSEE-EEEETTSCCCEEETTSSCEEE
T ss_pred cEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCcEEEEEe-ccCCcEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCCceeE
Confidence 35788899887655444 477889999987554443332 334467889998755544 55556678999999854433
Q ss_pred EEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeE
Q psy5806 1125 ILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRI 1204 (1332)
Q Consensus 1125 ~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I 1204 (1332)
.+..-......++++|...+|+-+. .. ..|..-++........+...-.....+++.+++..|. +-...+.|
T Consensus 187 ~~~~h~~~V~~v~~~p~~~~l~s~s-~D------~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~-s~s~D~~v 258 (410)
T 1vyh_C 187 TMHGHDHNVSSVSIMPNGDHIVSAS-RD------KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA-SCSNDQTV 258 (410)
T ss_dssp CCCCCSSCEEEEEECSSSSEEEEEE-TT------SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEE-EEETTSCE
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEe-CC------CeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEE-EEcCCCeE
Confidence 3433345678999999655554443 32 4677777755444333333334566777776665554 44567788
Q ss_pred EEEecCCCceEEEE-e-ecccceEEEecCCcccc----------------ccEEEEEECCCCEEEEEEecCCCCcceEEE
Q psy5806 1205 EYCDFFGRSRKIVI-S-KVAPYGLSVRQSPGKAF----------------IVELYWTDWEAMSVVIAREKSDTGQWDVHL 1266 (1332)
Q Consensus 1205 ~~~d~dG~~~~~~~-~-~~~P~glav~~~~~~~~----------------~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~ 1266 (1332)
...|+........+ . ......+++ +++..+ .+.+.++-...+.|...|..++ .....
T Consensus 259 ~vwd~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~---~~~~~ 333 (410)
T 1vyh_C 259 RVWVVATKECKAELREHRHVVECISW--APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG---MCLMT 333 (410)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEE--CCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT---EEEEE
T ss_pred EEEECCCCceeeEecCCCceEEEEEE--cCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC---ceEEE
Confidence 88888644332222 2 333345555 222111 1445566667788888888777 55445
Q ss_pred EecCCCCeeeE
Q psy5806 1267 IRSNQEDFLNI 1277 (1332)
Q Consensus 1267 ~~~~~~~~~~i 1277 (1332)
+......+..+
T Consensus 334 ~~~h~~~v~~v 344 (410)
T 1vyh_C 334 LVGHDNWVRGV 344 (410)
T ss_dssp EECCSSCEEEE
T ss_pred EECCCCcEEEE
Confidence 44433334443
No 265
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.50 E-value=0.00042 Score=65.43 Aligned_cols=43 Identities=33% Similarity=0.857 Sum_probs=2.5
Q ss_pred CCccccccCC-CCcceeeeccCCCceEEeCCCCceecCCCCCcC
Q psy5806 388 RQPNYQSHCA-PKVCSHICLPNKHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 388 ~qp~~~n~C~-~g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
+.+.++|+|. .+.|++.|++.+++|+|.|+.||.+..|+++|+
T Consensus 64 ~~C~dideC~~~~~C~~~C~n~~gsy~C~C~~Gy~~~~d~~~C~ 107 (107)
T 2w2n_E 64 RRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK 107 (107)
T ss_dssp TEEEC---------------------------------------
T ss_pred CccccccccCCCCCcCCeeecCCCCEEEECCCCceECCCCCccC
Confidence 3445678898 478999999999999999999999999999884
No 266
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.50 E-value=0.067 Score=61.87 Aligned_cols=216 Identities=9% Similarity=-0.025 Sum_probs=122.4
Q ss_pred cceEEEEEeCCCcEEEEEeCC-----CCeEEEEECCCCCCceeEee---cCCCCceeeEEEecCCeEEEEcCCCceEEEE
Q psy5806 1045 MSSIFFDYHYSKNLIYFADMR-----SGNLRTFDMSDSTRIKPIPL---MNDTIRDNFVIDWVANNIYYIDSQMHTINVA 1116 (1332)
Q Consensus 1045 ~~~~~id~d~~~~~lY~sd~~-----~~~I~~~~l~~g~~~~~i~~---~~~~~p~glAvDw~~~~LY~td~~~~~I~v~ 1116 (1332)
..+.+++|++.+..|.-+... .+.|...+...+.....+.. ........|++.+.+ .+..+ ...+.|.++
T Consensus 43 ~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~-~~l~~-s~dg~v~lW 120 (357)
T 4g56_B 43 VQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK-GILVA-SDSGAVELW 120 (357)
T ss_dssp SEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT-EEEEE-ETTSCEEEC
T ss_pred CCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC-CEEEE-ECCCEEEEe
Confidence 457899999998877665432 45676666543332222211 122346778888644 44444 346689888
Q ss_pred eeCC-ceEEE----EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCC
Q psy5806 1117 RSDG-QHKKI----LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQ 1191 (1332)
Q Consensus 1117 ~ldG-~~~~~----~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~ 1191 (1332)
++.. +...+ ...-......|+++|...+|.-... . ..|..-++........+...-...+.+++.+++
T Consensus 121 d~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~-d------g~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 121 EILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK-D------FSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp --------CCCCEEECCCSSCEEEEEECSSSSEEEEEET-T------SCEEEEETTTTEEEEEECCCSSCEEEEEECTTC
T ss_pred eccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC-C------CeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC
Confidence 8863 32211 1112345789999996555544433 2 457777776555444444334566788888877
Q ss_pred CEEEEEEcCCCeEEEEecCCCceEEEEe----ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEE
Q psy5806 1192 RRLFWADSTNKRIEYCDFFGRSRKIVIS----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLI 1267 (1332)
Q Consensus 1192 ~~LY~~d~~~~~I~~~d~dG~~~~~~~~----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~ 1267 (1332)
+.++.+-...+.|...|+.......... ...+.+|++ .+.++.++.+-...+.|...+..++ .....+
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~-----sp~~~~~la~g~~d~~i~~wd~~~~---~~~~~~ 265 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTW-----HPEKDDTFACGDETGNVSLVNIKNP---DSAQTS 265 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEE-----CTTSTTEEEEEESSSCEEEEESSCG---GGCEEE
T ss_pred CceeeeeccCCceEEEECCCCceeeeeeeccccccccchhh-----hhcccceEEEeecccceeEEECCCC---cEeEEE
Confidence 7777777778889888886433222222 344567777 2334556666557788888888776 444555
Q ss_pred ecCCCCeeeE
Q psy5806 1268 RSNQEDFLNI 1277 (1332)
Q Consensus 1268 ~~~~~~~~~i 1277 (1332)
......+..|
T Consensus 266 ~~~~~~v~~l 275 (357)
T 4g56_B 266 AVHSQNITGL 275 (357)
T ss_dssp CCCSSCEEEE
T ss_pred eccceeEEEE
Confidence 4433333333
No 267
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.49 E-value=0.68 Score=52.79 Aligned_cols=199 Identities=9% Similarity=0.012 Sum_probs=117.0
Q ss_pred ceEEEEEeCC--CcEEEEEeCCCCeEEEEECCCCCCcee-EeecCCCCceeeEEEec--CCeEEEEcCCCceEEEEeeCC
Q psy5806 1046 SSIFFDYHYS--KNLIYFADMRSGNLRTFDMSDSTRIKP-IPLMNDTIRDNFVIDWV--ANNIYYIDSQMHTINVARSDG 1120 (1332)
Q Consensus 1046 ~~~~id~d~~--~~~lY~sd~~~~~I~~~~l~~g~~~~~-i~~~~~~~p~glAvDw~--~~~LY~td~~~~~I~v~~ldG 1120 (1332)
.+..++|.+. ++.|+.+. ..+.|+..++.++..... ........+..+++.+. ++.|+.+ ...+.|.++++..
T Consensus 57 ~v~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~ 134 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILASCS-YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVA-SSDGKVSVVEFKE 134 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEE-TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEE-ETTSEEEEEECCT
T ss_pred cEEEEEeCCCCCCCEEEEec-cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEe-cCCCcEEEEecCC
Confidence 4678899765 55555554 678888888764431122 22223446788999877 4555544 4567899999975
Q ss_pred c---eEEEEecCCCCceEEEEcCC------------CcEEEEEecCCCCCCCCCcEEEEecCCCce-EEE---EecCCCC
Q psy5806 1121 Q---HKKILVNDLMEPLAIAVYPR------------RGLLFYSHWGLYDNSPTTKIEKVYLDGSYR-TVL---VEEDLAF 1181 (1332)
Q Consensus 1121 ~---~~~~~~~~~~~P~~iavdp~------------~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~-~~l---~~~~l~~ 1181 (1332)
. ....+.........++++|. ++.++.+-... +.|...++..... ..+ +...-..
T Consensus 135 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~h~~~ 208 (379)
T 3jrp_A 135 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD------NLVKIWKYNSDAQTYVLESTLEGHSDW 208 (379)
T ss_dssp TSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETT------SCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred CCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCC------CeEEEEEecCCCcceeeEEEEecccCc
Confidence 4 22224444456789999995 35555554333 4566666643322 122 2222345
Q ss_pred cceEEEecCC--CEEEEEEcCCCeEEEEecCCCc---eEEEEe----ecccceEEEecCCccccccEEEEEECCCCEEEE
Q psy5806 1182 PNELAIDFKQ--RRLFWADSTNKRIEYCDFFGRS---RKIVIS----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVI 1252 (1332)
Q Consensus 1182 p~glaiD~~~--~~LY~~d~~~~~I~~~d~dG~~---~~~~~~----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~ 1252 (1332)
...|++.++. +.+..+-...+.|...|+.... ...+.. .....++++ .+.+.+|+.+. ..+.|..
T Consensus 209 v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~-----s~~g~~l~~~~-~dg~i~i 282 (379)
T 3jrp_A 209 VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASW-----SLSGNVLALSG-GDNKVTL 282 (379)
T ss_dssp EEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEE-----CSSSCCEEEEE-SSSSEEE
T ss_pred EeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEE-----cCCCCEEEEec-CCCcEEE
Confidence 6788999873 4555555677889888887543 222222 333456677 33455566555 4677877
Q ss_pred EEecCC
Q psy5806 1253 AREKSD 1258 (1332)
Q Consensus 1253 ~~~~~g 1258 (1332)
.+...+
T Consensus 283 w~~~~~ 288 (379)
T 3jrp_A 283 WKENLE 288 (379)
T ss_dssp EEEEET
T ss_pred EeCCCC
Confidence 776644
No 268
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.48 E-value=0.2 Score=58.00 Aligned_cols=200 Identities=11% Similarity=0.003 Sum_probs=125.8
Q ss_pred ceEEEEEeC-CCcEEEEEeCCCCeEEEEECCCCCCceeEee------------cCCCCceeeEEEecCCeEEEEcCCCce
Q psy5806 1046 SSIFFDYHY-SKNLIYFADMRSGNLRTFDMSDSTRIKPIPL------------MNDTIRDNFVIDWVANNIYYIDSQMHT 1112 (1332)
Q Consensus 1046 ~~~~id~d~-~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~------------~~~~~p~glAvDw~~~~LY~td~~~~~ 1112 (1332)
.+..++|++ .++.|+.. ...+.|...++.++.....+.. .....+..|++.+..++++++-...+.
T Consensus 45 ~v~~~~~s~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~ 123 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSG-GSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKT 123 (408)
T ss_dssp CEEEEEECTTTCCEEEEE-ETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSE
T ss_pred cEEEEEEecCCCCEEEEE-cCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCe
Confidence 467899999 66555544 4678899999886554443321 133467788888755656666666789
Q ss_pred EEEEeeCCceEEEEecCCCCceEEEEcCCCc--EEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecC
Q psy5806 1113 INVARSDGQHKKILVNDLMEPLAIAVYPRRG--LLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFK 1190 (1332)
Q Consensus 1113 I~v~~ldG~~~~~~~~~~~~P~~iavdp~~g--~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~ 1190 (1332)
|.+++++................+++.|... .++.+.... +.|...++........+...-.....|++.++
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (408)
T 4a11_B 124 LKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG------PKVQLCDLKSGSCSHILQGHRQEILAVSWSPR 197 (408)
T ss_dssp EEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS------SSEEEEESSSSCCCEEECCCCSCEEEEEECSS
T ss_pred EEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC------CeEEEEeCCCcceeeeecCCCCcEEEEEECCC
Confidence 9999998654444223335678888888533 244443332 56888888655544444433455678999988
Q ss_pred CCEEEEEEcCCCeEEEEecCCCc-eEEEE----------------e-ecccceEEEecCCccccccEEEEEECCCCEEEE
Q psy5806 1191 QRRLFWADSTNKRIEYCDFFGRS-RKIVI----------------S-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVI 1252 (1332)
Q Consensus 1191 ~~~LY~~d~~~~~I~~~d~dG~~-~~~~~----------------~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~ 1252 (1332)
++.|+++-...+.|...|+.... ....+ . .....+|++ .+.+.+|+.. ...+.|..
T Consensus 198 ~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~l~~~-~~dg~i~v 271 (408)
T 4a11_B 198 YDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF-----TSDGLHLLTV-GTDNRMRL 271 (408)
T ss_dssp CTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE-----CTTSSEEEEE-ETTSCEEE
T ss_pred CCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE-----cCCCCEEEEe-cCCCeEEE
Confidence 88766666678889998886432 11111 1 334566777 2234445444 46678888
Q ss_pred EEecCC
Q psy5806 1253 AREKSD 1258 (1332)
Q Consensus 1253 ~~~~~g 1258 (1332)
.+..++
T Consensus 272 wd~~~~ 277 (408)
T 4a11_B 272 WNSSNG 277 (408)
T ss_dssp EETTTC
T ss_pred EECCCC
Confidence 887766
No 269
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.46 E-value=0.044 Score=65.26 Aligned_cols=199 Identities=9% Similarity=0.043 Sum_probs=125.4
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeec-CCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLM-NDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKK 1124 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~-~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~ 1124 (1332)
.+..|+|+|.+..+..+-...|.|...++..+.....+... ..+...+|++.+..+++.++-...+.|.++++.+....
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR 200 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee
Confidence 36899999976656655557889998887754443333222 23467889998766666667677789999999877655
Q ss_pred EEecC---CCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCC
Q psy5806 1125 ILVND---LMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTN 1201 (1332)
Q Consensus 1125 ~~~~~---~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~ 1201 (1332)
.+... ......++++|...+| .+-... +.|...+++|.....+.. .-.....|++.+.++.++.+-...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l-~~g~~d------g~i~~wd~~~~~~~~~~~-h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMV-VTGDNV------GNVILLNMDGKELWNLRM-HKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEE-EEECSS------SBEEEEESSSCBCCCSBC-CSSCEEEEEECTTCSSEEEEEETT
T ss_pred EEeccCCCCccEEEEEECCCCCEE-EEEeCC------CcEeeeccCcceeEEEec-ccceEEeeeecCCCceEEEEecCc
Confidence 53322 1234679999955444 443322 568888888765433321 224567888988887777776677
Q ss_pred CeEEEEecCC-CceEEEEe-e---cccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1202 KRIEYCDFFG-RSRKIVIS-K---VAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1202 ~~I~~~d~dG-~~~~~~~~-~---~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
+.|...|+.. .....+.. . ....+|++ ++.+.+|+ +-...+.|...+..++
T Consensus 273 ~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~-----spdg~~l~-s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 273 QTVKIWDLRQVRGKASFLYSLPHRHPVNAACF-----SPDGARLL-TTDQKSEIRVYSASQW 328 (435)
T ss_dssp SBCCEEETTTCCSSSCCSBCCBCSSCEEECCB-----CTTSSEEE-EEESSSCEEEEESSSS
T ss_pred ceeeEEecccccccceEEEeeeccccccceeE-----CCCCCeeE-EEcCCCEEEEEECCCC
Confidence 7888878753 22222222 2 22345555 22344444 4456788888887766
No 270
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.44 E-value=1.7 Score=48.96 Aligned_cols=162 Identities=9% Similarity=-0.034 Sum_probs=101.5
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCC-ceEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDG-QHKK 1124 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG-~~~~ 1124 (1332)
.+..++|++.++.|+... ..+.|...++..+.............+.++++++.++.|+.+. ..+.|.++++.. +...
T Consensus 177 ~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGH-KDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSS-RDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp CEEEEEECGGGCEEEEEE-TTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTCCEEE
T ss_pred ceeEEEEcCCCCEEEEEc-CCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEec-CCceEEEEECCCCceee
Confidence 467888898887777665 6788999998742222233333445678899998777776554 456899999974 4333
Q ss_pred EEecCCCCceEEEEcCCCcEEEEEecCCCC-------CCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEE
Q psy5806 1125 ILVNDLMEPLAIAVYPRRGLLFYSHWGLYD-------NSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWA 1197 (1332)
Q Consensus 1125 ~~~~~~~~P~~iavdp~~g~Lywtd~~~~~-------~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~ 1197 (1332)
.+. .......++++|...+|+.+...... ......|...++........+.........+++.++++.|.-+
T Consensus 255 ~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 333 (369)
T 3zwl_B 255 KYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASG 333 (369)
T ss_dssp EEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred eec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEE
Confidence 343 44678899999987777777543200 0011145555554444444444344567788888877666655
Q ss_pred EcCCCeEEEEecCC
Q psy5806 1198 DSTNKRIEYCDFFG 1211 (1332)
Q Consensus 1198 d~~~~~I~~~d~dG 1211 (1332)
...+.|...+++.
T Consensus 334 -~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 334 -GEDGFIRLHHFEK 346 (369)
T ss_dssp -ETTSEEEEEEECH
T ss_pred -cCCCeEEEEECcc
Confidence 3556777766653
No 271
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.42 E-value=0.47 Score=53.66 Aligned_cols=230 Identities=9% Similarity=-0.071 Sum_probs=126.5
Q ss_pred ceEEEEeecceEEEEeCCCCCCCCcccccCC-ccceEEEEE------eCCCcEEEEEeCCCCeEEEEECCCCCCceeEee
Q psy5806 1013 EFLLYTSRFGVIRRISLDTADLLPVTLPFPE-YMSSIFFDY------HYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPL 1085 (1332)
Q Consensus 1013 ~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~-~~~~~~id~------d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~ 1085 (1332)
.+|+....+..|+..++...... ...+.+ ...+..++| ++.++.|+... ..+.|...++..+......+.
T Consensus 81 ~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~ 157 (357)
T 3i2n_A 81 RYLATGDFGGNLHIWNLEAPEMP--VYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGS-RDGTVKVWDPRQKDDPVANME 157 (357)
T ss_dssp CCEEEEETTSCEEEECTTSCSSC--SEEECCCSSCEEEEEEESGGGCC-CCCEEEEEE-TTSCEEEECTTSCSSCSEEEC
T ss_pred ceEEEecCCCeEEEEeCCCCCcc--EEEEEecccceEEEeeccccccCCCccEEEEEe-CCCeEEEEeCCCCCCcceecc
Confidence 34444443322666666543311 111222 223566755 45555665554 678899998875542222222
Q ss_pred cCCC----CceeeE----EEecCCeEEEEcCCCceEEEEeeCCceEEEEecCCCCceEEEEcC---CCcEEEEEecCCCC
Q psy5806 1086 MNDT----IRDNFV----IDWVANNIYYIDSQMHTINVARSDGQHKKILVNDLMEPLAIAVYP---RRGLLFYSHWGLYD 1154 (1332)
Q Consensus 1086 ~~~~----~p~glA----vDw~~~~LY~td~~~~~I~v~~ldG~~~~~~~~~~~~P~~iavdp---~~g~Lywtd~~~~~ 1154 (1332)
...+ ....++ +++.++.|+ +-...+.|.++++.................++++| ...+|+.+...
T Consensus 158 ~~~~~~~~~v~~~~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d--- 233 (357)
T 3i2n_A 158 PVQGENKRDCWTVAFGNAYNQEERVVC-AGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLE--- 233 (357)
T ss_dssp CCTTSCCCCEEEEEEECCCC-CCCEEE-EEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEEST---
T ss_pred ccCCCCCCceEEEEEEeccCCCCCEEE-EEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCC---
Confidence 1111 445555 444455554 44456789999998655444333345789999999 55566555432
Q ss_pred CCCCCcEEEEecCCCceE-EE----EecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCc-e--------------
Q psy5806 1155 NSPTTKIEKVYLDGSYRT-VL----VEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRS-R-------------- 1214 (1332)
Q Consensus 1155 ~~~~~~I~r~~ldG~~~~-~l----~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~-~-------------- 1214 (1332)
+.|...++...... .+ ....-.....+++.++++.++++-...+.|...|+.... +
T Consensus 234 ----g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~ 309 (357)
T 3i2n_A 234 ----GKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAG 309 (357)
T ss_dssp ----TEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCC
T ss_pred ----CeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccccc
Confidence 45666555432211 11 112345567888998777567776778888888886322 1
Q ss_pred --EEEEe----ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1215 --KIVIS----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1215 --~~~~~----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
+.+.. .....+|++ .+.+.+|.++-...+.|...+..+.
T Consensus 310 ~~~~~~~~~~~~~~v~~~~~-----s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 310 SVSLLQNVTLSTQPISSLDW-----SPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEEEEEEEECCSSCEEEEEE-----CSSSTTEEEEEETTSEEEEEEECC-
T ss_pred ccceeeccccCCCCeeEEEE-----cCCCCeEEEEecCCCcEEEEECCCc
Confidence 12222 334466777 3345566656667788888776543
No 272
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.39 E-value=1.5 Score=55.86 Aligned_cols=164 Identities=10% Similarity=0.021 Sum_probs=99.2
Q ss_pred ceEEEEEeCCCcEE-EEEeCCC--CeEEEEECCCCCC------ceeEeec-CCC-----CceeeEEEecCCeEE-EEc--
Q psy5806 1046 SSIFFDYHYSKNLI-YFADMRS--GNLRTFDMSDSTR------IKPIPLM-NDT-----IRDNFVIDWVANNIY-YID-- 1107 (1332)
Q Consensus 1046 ~~~~id~d~~~~~l-Y~sd~~~--~~I~~~~l~~g~~------~~~i~~~-~~~-----~p~glAvDw~~~~LY-~td-- 1107 (1332)
.+..++|.+.++.+ ++.+... ..|+.+++.+|.. ...++.. ..+ .+...++.+.++.|+ |..
T Consensus 261 ~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~ 340 (740)
T 4a5s_A 261 YLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNE 340 (740)
T ss_dssp EEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECT
T ss_pred EEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcC
Confidence 35678899887744 4444333 3688888775541 2222211 111 145778888888876 653
Q ss_pred CCCceEEEEeeCCceEEEEecCCCCceEEE-EcCCCcEEEEEecC--CCCCCCCCcEEEEecCCCceEEEEecCC----C
Q psy5806 1108 SQMHTINVARSDGQHKKILVNDLMEPLAIA-VYPRRGLLFYSHWG--LYDNSPTTKIEKVYLDGSYRTVLVEEDL----A 1180 (1332)
Q Consensus 1108 ~~~~~I~v~~ldG~~~~~~~~~~~~P~~ia-vdp~~g~Lywtd~~--~~~~~~~~~I~r~~ldG~~~~~l~~~~l----~ 1180 (1332)
.+...|..++++|...+.+..+.-....+. +| ++.||++... . +.....|++++++|......++..+ .
T Consensus 341 ~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~~d--~~~i~f~~~~~~~--~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~ 416 (740)
T 4a5s_A 341 EGYRHICYFQIDKKDCTFITKGTWEVIGIEALT--SDYLYYISNEYKG--MPGGRNLYKIQLIDYTKVTCLSCELNPERC 416 (740)
T ss_dssp TSCEEEEEEETTCSSCEESCCSSSCEEEEEEEC--SSEEEEEESCGGG--CTTCBEEEEEETTEEEEEEESSTTTSTTTB
T ss_pred CCceEEEEEECCCCceEecccCCEEEEEEEEEe--CCEEEEEEecCCC--CCceeEEEEEECCCCCcceeeccccCCCCC
Confidence 234678889999876666655533444433 55 7899998765 2 2345689999999977654444222 2
Q ss_pred CcceEEEecCCCEEEEEEcC--CCeEEEEecCCCc
Q psy5806 1181 FPNELAIDFKQRRLFWADST--NKRIEYCDFFGRS 1213 (1332)
Q Consensus 1181 ~p~glaiD~~~~~LY~~d~~--~~~I~~~d~dG~~ 1213 (1332)
.....+++++++.+.+.-.. ...+...+.++..
T Consensus 417 ~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~ 451 (740)
T 4a5s_A 417 QYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDK 451 (740)
T ss_dssp CBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTE
T ss_pred ceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCCc
Confidence 34567888877765554433 3356666766443
No 273
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.35 E-value=0.43 Score=60.62 Aligned_cols=166 Identities=10% Similarity=0.070 Sum_probs=103.9
Q ss_pred eEEEEEeCCCcEEEEEeCC---CCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCC---CceEEEEeeCC
Q psy5806 1047 SIFFDYHYSKNLIYFADMR---SGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQ---MHTINVARSDG 1120 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~---~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~---~~~I~v~~ldG 1120 (1332)
..++.+++.++.|+++... .+.|+.++++++....+.+......-... +++.++.||+.... +.+|.++++++
T Consensus 236 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~ 314 (693)
T 3iuj_A 236 YVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAAN 314 (693)
T ss_dssp EEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred EEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 4678899999999876542 25899999875543322222222222222 56678999886432 46898999985
Q ss_pred ceE---EEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEE
Q psy5806 1121 QHK---KILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWA 1197 (1332)
Q Consensus 1121 ~~~---~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~ 1197 (1332)
... +.+........ .+++..++|+++.... ...+|+..+++|.....+.........+++.++++++|+++
T Consensus 315 ~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~----g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~ 388 (693)
T 3iuj_A 315 PGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVD----ATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFG 388 (693)
T ss_dssp CCGGGCEEEECCCSSCE--EEEEETTEEEEEEEET----TEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEE
T ss_pred CCccccEEEecCCCCEE--EEEEECCEEEEEEEEC----CeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEE
Confidence 432 33333222323 6777777888876433 24689999999876655532222333455666778888887
Q ss_pred EcC---CCeEEEEecCCCceEEEEe
Q psy5806 1198 DST---NKRIEYCDFFGRSRKIVIS 1219 (1332)
Q Consensus 1198 d~~---~~~I~~~d~dG~~~~~~~~ 1219 (1332)
-.. ...|..+|+++...+.+..
T Consensus 389 ~ss~~tP~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 389 FENYAQPPTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp EECSSSCCEEEEECTTTCCEEEEEC
T ss_pred ecCCCCCCEEEEEECCCCeEEEEEe
Confidence 543 3689999997766655554
No 274
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.31 E-value=2.2 Score=48.75 Aligned_cols=214 Identities=11% Similarity=0.011 Sum_probs=128.8
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCC-----ceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTR-----IKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD- 1119 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~-----~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld- 1119 (1332)
.+.+++|.+.+..|... ...+.|...++..... ....+....+....+++...+..|+. -...+.|.++++.
T Consensus 108 ~v~~~~~sp~g~~lasg-~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t-~s~D~~v~lwd~~~ 185 (354)
T 2pbi_B 108 WVMACAYAPSGCAIACG-GLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILT-ASGDGTCALWDVES 185 (354)
T ss_dssp CCCEEEECTTSSEEEEE-STTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEE-EETTSEEEEEETTT
T ss_pred CEEEEEECCCCCEEEEe-eCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEE-EeCCCcEEEEeCCC
Confidence 35788999988766544 4677787777652211 11122223345677888876666654 4456789999987
Q ss_pred CceEEEEecCCCCceEEEEcCC-CcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEE
Q psy5806 1120 GQHKKILVNDLMEPLAIAVYPR-RGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWAD 1198 (1332)
Q Consensus 1120 G~~~~~~~~~~~~P~~iavdp~-~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d 1198 (1332)
|+....+..-......+++.|. .|.++++-... +.|..-++........+...-...+.+++.++++.|.-+
T Consensus 186 ~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~D------g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~- 258 (354)
T 2pbi_B 186 GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCD------KKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASG- 258 (354)
T ss_dssp CCEEEEEECCSSCEEEEEECCCSSCCEEEEEETT------SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE-
T ss_pred CeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCC------CeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEE-
Confidence 5544445443345678888875 35555654433 567777876555444444333557788998877766554
Q ss_pred cCCCeEEEEecCCCceEEEEe----ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEecCCCCe
Q psy5806 1199 STNKRIEYCDFFGRSRKIVIS----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRSNQEDF 1274 (1332)
Q Consensus 1199 ~~~~~I~~~d~dG~~~~~~~~----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~~~~~~ 1274 (1332)
...+.|...|+.......+.. ......+++ . .++.+..+-...+.|...+..++ .....+......+
T Consensus 259 s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~-----s-~~g~~l~~g~~d~~i~vwd~~~~---~~~~~l~~h~~~v 329 (354)
T 2pbi_B 259 SDDATCRLYDLRADREVAIYSKESIIFGASSVDF-----S-LSGRLLFAGYNDYTINVWDVLKG---SRVSILFGHENRV 329 (354)
T ss_dssp ETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE-----C-TTSSEEEEEETTSCEEEEETTTC---SEEEEECCCSSCE
T ss_pred eCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE-----e-CCCCEEEEEECCCcEEEEECCCC---ceEEEEECCCCcE
Confidence 567789988886543333332 123456666 2 23444555557789999998777 5444444333333
Q ss_pred eeE
Q psy5806 1275 LNI 1277 (1332)
Q Consensus 1275 ~~i 1277 (1332)
..+
T Consensus 330 ~~l 332 (354)
T 2pbi_B 330 STL 332 (354)
T ss_dssp EEE
T ss_pred EEE
Confidence 333
No 275
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=96.30 E-value=0.0022 Score=83.79 Aligned_cols=32 Identities=34% Similarity=0.865 Sum_probs=30.7
Q ss_pred CceecCCCCceEeCCcCcCCCCCCCCCCCCCCC
Q psy5806 18 QYKKCNRTGACIPAQWQCDNEFDCEMGEDEMKC 50 (1332)
Q Consensus 18 ~~f~C~~~~~Ci~~~~~CDg~~DC~dgsDE~~C 50 (1332)
.+|+|. +|+||+..|+|||+.||.|+|||.+|
T Consensus 121 ~~F~C~-~g~ci~~~~~c~g~~dC~d~sde~~C 152 (913)
T 3t5o_A 121 NKFRCD-SGRCIARKLECNGENDCGDNSDERDC 152 (913)
T ss_dssp SEEECT-TSCEEEGGGSSSSSCCSSSSGGGTTC
T ss_pred cccccC-CCceEccceecCCcccCCCccccccC
Confidence 579998 89999999999999999999999999
No 276
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.30 E-value=0.25 Score=56.00 Aligned_cols=202 Identities=6% Similarity=-0.093 Sum_probs=114.3
Q ss_pred ceEEEEEeCCCcEEEEEeCC---CCeEEEEECCCCCCceeEeecCCCCceeeEEEecC--CeEEEEcCCCceEEEEeeCC
Q psy5806 1046 SSIFFDYHYSKNLIYFADMR---SGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVA--NNIYYIDSQMHTINVARSDG 1120 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~---~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~--~~LY~td~~~~~I~v~~ldG 1120 (1332)
.+.+++|.+.+..+..+... .+.|+..++.++................+++.+.. +++.++-...+.|.++++..
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 99 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEA 99 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTS
T ss_pred ceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCC
Confidence 36788999988777766544 78888888774433322222233456778887663 34444545567899999974
Q ss_pred c--eEEEEecCCCCceEEE------EcCCCcEEEEEecCCCCCCCCCcEEEEecCCCc-eEEEEecCCC----CcceEE-
Q psy5806 1121 Q--HKKILVNDLMEPLAIA------VYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSY-RTVLVEEDLA----FPNELA- 1186 (1332)
Q Consensus 1121 ~--~~~~~~~~~~~P~~ia------vdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~-~~~l~~~~l~----~p~gla- 1186 (1332)
. ....+..-......++ ++|....|+..... +.|...++.... ....+..... ....++
T Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 172 (357)
T 3i2n_A 100 PEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRD-------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAF 172 (357)
T ss_dssp CSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETT-------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEE
T ss_pred CCccEEEEEecccceEEEeeccccccCCCccEEEEEeCC-------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEE
Confidence 3 3333443334566774 45644455544432 457777776544 2233321111 333455
Q ss_pred ---EecCCCEEEEEEcCCCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1187 ---IDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1187 ---iD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
+.++++.|+.+ ...+.|...|+.......... .....++++ ++....+++|+ +-...+.|...+..++
T Consensus 173 ~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~l~-~~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 173 GNAYNQEERVVCAG-YDNGDIKLFDLRNMALRWETNIKNGVCSLEF--DRKDISMNKLV-ATSLEGKFHVFDMRTQ 244 (357)
T ss_dssp ECCCC-CCCEEEEE-ETTSEEEEEETTTTEEEEEEECSSCEEEEEE--SCSSSSCCEEE-EEESTTEEEEEEEEEE
T ss_pred EeccCCCCCEEEEE-ccCCeEEEEECccCceeeecCCCCceEEEEc--CCCCCCCCEEE-EECCCCeEEEEeCcCC
Confidence 44556555554 466789999997655433333 556677888 11100334444 4456788888777654
No 277
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=96.29 E-value=0.0017 Score=73.06 Aligned_cols=41 Identities=32% Similarity=0.848 Sum_probs=37.4
Q ss_pred cCCCcCC-CCCCccccccCCCCCceeeCCCCccccCCCCcccc
Q psy5806 663 THPCNEN-NGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSE 704 (1332)
Q Consensus 663 ~~pC~~~-nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~ 704 (1332)
.|.|..+ ||+|+|+|...++ +|+|.|+.||.|..|+++|.+
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~~-~~~C~C~~G~~l~~d~~sC~p 43 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQE-SYTCSCAQGYRLGEDHKQCVP 43 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCTT-SCCCBCCTTEEECTTSSCEEE
T ss_pred CCccCCCCCCCCCCEeeCCCC-CeEecCCCCcccCCCCCcccc
Confidence 4789888 9999999998877 899999999999999999986
No 278
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.29 E-value=0.96 Score=50.89 Aligned_cols=196 Identities=14% Similarity=0.006 Sum_probs=121.8
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKI 1125 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~ 1125 (1332)
.+..++|.+.++.|+-.. ..+.|+..++.++.....+. ........+++++.+..| ++-...+.|.++++.+.....
T Consensus 67 ~v~~~~~s~dg~~l~s~s-~D~~v~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l-~s~s~D~~i~vwd~~~~~~~~ 143 (319)
T 3frx_A 67 IVQDCTLTADGAYALSAS-WDKTLRLWDVATGETYQRFV-GHKSDVMSVDIDKKASMI-ISGSRDKTIKVWTIKGQCLAT 143 (319)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSCEE-EEEETTSCEEEEETTSCEEEE
T ss_pred cEEEEEECCCCCEEEEEe-CCCEEEEEECCCCCeeEEEc-cCCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEE
Confidence 356888998887766554 77889999987554333332 234467888998766655 455556789999999877666
Q ss_pred EecCCCCceEEEEcCCC-----cEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcC
Q psy5806 1126 LVNDLMEPLAIAVYPRR-----GLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADST 1200 (1332)
Q Consensus 1126 ~~~~~~~P~~iavdp~~-----g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~ 1200 (1332)
+.........+++.|.. +.++.+-... ..|..-++........+...-...+.+++.++++.|.-+ ..
T Consensus 144 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d------~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~-~~ 216 (319)
T 3frx_A 144 LLGHNDWVSQVRVVPNEKADDDSVTIISAGND------KMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASA-GK 216 (319)
T ss_dssp ECCCSSCEEEEEECCC------CCEEEEEETT------SCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEE-ET
T ss_pred EeccCCcEEEEEEccCCCCCCCccEEEEEeCC------CEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEE-eC
Confidence 55444567888888842 2344444333 467777776544433333333456788999877766654 46
Q ss_pred CCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1201 NKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1201 ~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.+.|...|+........+. .....+|++ .+.+.+|..+. .+.|...+..++
T Consensus 217 dg~i~iwd~~~~~~~~~~~~~~~v~~~~~-----sp~~~~la~~~--~~~i~v~~~~~~ 268 (319)
T 3frx_A 217 DGEIMLWNLAAKKAMYTLSAQDEVFSLAF-----SPNRYWLAAAT--ATGIKVFSLDPQ 268 (319)
T ss_dssp TCEEEEEETTTTEEEEEEECCSCEEEEEE-----CSSSSEEEEEE--TTEEEEEEETTE
T ss_pred CCeEEEEECCCCcEEEEecCCCcEEEEEE-----cCCCCEEEEEc--CCCcEEEEeCcC
Confidence 6789988887544333333 445677777 23344454443 344555555443
No 279
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=96.27 E-value=0.0017 Score=62.05 Aligned_cols=39 Identities=28% Similarity=0.648 Sum_probs=35.5
Q ss_pred ccCC--CCcceeeeccCCCceEEeCCCCceecCCCCCcCCC
Q psy5806 394 SHCA--PKVCSHICLPNKHRFTCQCPLGLTLSPDNKSCSES 432 (1332)
Q Consensus 394 n~C~--~g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~~~ 432 (1332)
++|. +++|+|.|++..++|+|.|+.||+|..++++|+..
T Consensus 55 ~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~~ 95 (114)
T 1aut_L 55 LNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPA 95 (114)
T ss_dssp SSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEEC
T ss_pred CcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCcC
Confidence 5787 78999999999999999999999999999999753
No 280
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.24 E-value=1.3 Score=48.92 Aligned_cols=221 Identities=10% Similarity=0.023 Sum_probs=126.0
Q ss_pred eEEEEeecceEEEEeCCCCCCCCcccccCC-ccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCce
Q psy5806 1014 FLLYTSRFGVIRRISLDTADLLPVTLPFPE-YMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRD 1092 (1332)
Q Consensus 1014 ~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~-~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~ 1092 (1332)
+|+....+..|+...+...........+.. ...+..++++ ++.|+.. ...+.|...+ . +.... ........+.
T Consensus 73 ~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~-~~d~~i~~~d-~-~~~~~-~~~~~~~~v~ 146 (313)
T 3odt_A 73 LLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DGVVISG-SWDKTAKVWK-E-GSLVY-NLQAHNASVW 146 (313)
T ss_dssp EEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE--TTEEEEE-ETTSEEEEEE-T-TEEEE-EEECCSSCEE
T ss_pred EEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec--CCEEEEE-eCCCCEEEEc-C-CcEEE-ecccCCCcee
Confidence 444444333266566654432222222222 2345677774 4445444 4678888887 2 22222 2223444667
Q ss_pred eeEEEecCCeEEEEcCCCceEEEEeeCCceEEEEec-CCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCce
Q psy5806 1093 NFVIDWVANNIYYIDSQMHTINVARSDGQHKKILVN-DLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYR 1171 (1332)
Q Consensus 1093 glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~~~~-~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~ 1171 (1332)
.+++....+++.++-...+.|.+++. ++....+.. .......++++| .+.|+... .. +.|...++.....
T Consensus 147 ~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~-~d------g~i~i~d~~~~~~ 217 (313)
T 3odt_A 147 DAKVVSFSENKFLTASADKTIKLWQN-DKVIKTFSGIHNDVVRHLAVVD-DGHFISCS-ND------GLIKLVDMHTGDV 217 (313)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEET-TEEEEEECSSCSSCEEEEEEEE-TTEEEEEE-TT------SEEEEEETTTCCE
T ss_pred EEEEccCCCCEEEEEECCCCEEEEec-CceEEEEeccCcccEEEEEEcC-CCeEEEcc-CC------CeEEEEECCchhh
Confidence 78887644555555556678888883 333333333 445678899998 45544333 32 5688888865554
Q ss_pred EEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECCCCE
Q psy5806 1172 TVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMS 1249 (1332)
Q Consensus 1172 ~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~ 1249 (1332)
...+...-.....+++.+++ +|+ +-...+.|...|+........+. .....+|++ ..++.+ ++-...+.
T Consensus 218 ~~~~~~~~~~i~~~~~~~~~-~l~-~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~------~~~~~~-~~~~~dg~ 288 (313)
T 3odt_A 218 LRTYEGHESFVYCIKLLPNG-DIV-SCGEDRTVRIWSKENGSLKQVITLPAISIWSVDC------MSNGDI-IVGSSDNL 288 (313)
T ss_dssp EEEEECCSSCEEEEEECTTS-CEE-EEETTSEEEEECTTTCCEEEEEECSSSCEEEEEE------CTTSCE-EEEETTSC
T ss_pred hhhhhcCCceEEEEEEecCC-CEE-EEecCCEEEEEECCCCceeEEEeccCceEEEEEE------ccCCCE-EEEeCCCc
Confidence 44444344567789998876 444 44567889999986444333333 445677887 223343 34556788
Q ss_pred EEEEEecCC
Q psy5806 1250 VVIAREKSD 1258 (1332)
Q Consensus 1250 V~~~~~~~g 1258 (1332)
|...+..++
T Consensus 289 i~iw~~~~~ 297 (313)
T 3odt_A 289 VRIFSQEKS 297 (313)
T ss_dssp EEEEESCGG
T ss_pred EEEEeCCCC
Confidence 888887665
No 281
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.23 E-value=0.0017 Score=67.08 Aligned_cols=40 Identities=33% Similarity=0.779 Sum_probs=35.1
Q ss_pred ccccCC--CCc---ceeeeccCCCceEEeCCCCceecCCCCCcCC
Q psy5806 392 YQSHCA--PKV---CSHICLPNKHRFTCQCPLGLTLSPDNKSCSE 431 (1332)
Q Consensus 392 ~~n~C~--~g~---CshlCl~~~~~~~C~C~~G~~L~~d~~tC~~ 431 (1332)
..++|. ++. |+|.|.+.+++|+|.|+.||+|..|+++|++
T Consensus 123 di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~ 167 (170)
T 1szb_A 123 DIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 167 (170)
T ss_dssp ECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred ccCcccCCCCCCCccCCccccCCCCEEEeCCCCcEECCCCCcccc
Confidence 457898 333 9999999999999999999999999999964
No 282
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=96.21 E-value=0.0017 Score=62.08 Aligned_cols=41 Identities=34% Similarity=0.752 Sum_probs=37.9
Q ss_pred CCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccc
Q psy5806 969 PNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFS 1009 (1332)
Q Consensus 969 ~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~ 1009 (1332)
.++|..+||+|+|.|+.++++|+|.|+.||.+..++++|..
T Consensus 54 ~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~ 94 (114)
T 1aut_L 54 FLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP 94 (114)
T ss_dssp SSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEE
T ss_pred CCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCc
Confidence 36898889999999999999999999999999999999974
No 283
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.20 E-value=3.9 Score=50.63 Aligned_cols=311 Identities=9% Similarity=-0.023 Sum_probs=149.1
Q ss_pred CCCccceeEecCCCeEEEEeCCCCeEEEEeCC-CCceEEEEecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEec
Q psy5806 781 LNRTESIAVDAIGRKIYWTDMNAQTIMVSDID-GKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHM 859 (1332)
Q Consensus 781 ~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ld-G~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~ 859 (1332)
-..+..+++++.++.|..+.. +.|.+.++. ++...++. .-......+++.|...+|.-... . ..|..-++
T Consensus 18 ~g~~~~~~~spdg~~l~~~~~--~~v~l~~~~~~~~~~~~~-~h~~~v~~~~~spdg~~lasg~~--d----~~v~lWd~ 88 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCNG--TSVYTVPVGSLTDTEIYT-EHSHQTTVAKTSPSGYYCASGDV--H----GNVRIWDT 88 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEET--TEEEEEETTCSSCCEEEC-CCSSCEEEEEECTTSSEEEEEET--T----SEEEEEES
T ss_pred cCceeEEeeCCCCCEEEeCCC--CEEEEecCCCcccCeEec-CCCCceEEEEECCCCcEEEEEeC--C----CCEEEeEC
Confidence 345777889988887776653 488888885 55444443 22245688999997434433332 2 34555555
Q ss_pred C-CCCcEE-Eecc-cccCceeEEeCCCCCeEEEEeCCC---CeEEEEccCCCceeEEeccCCcceEEEEeCC--EEEEEe
Q psy5806 860 D-GTNRAV-FETE-VIWPSCLAIDYSDNPKLYWVDTSK---HTIEYKTLATGRAKRAYAVQSHPYTLTVLDY--YVYWTD 931 (1332)
Q Consensus 860 d-G~~~~~-l~~~-l~~P~gl~iD~~~~~~lYw~d~~~---~~I~~~~~dG~~~~~l~~~~~~P~~la~~~~--~iywtD 931 (1332)
. +..... .... -.....+++++++ ++|..+.... +.|...+ .|.....+........++++..+ ++..+-
T Consensus 89 ~~~~~~~~~~~~~~~~~v~~v~fs~dg-~~l~~~~~~~~~~~~v~~wd-~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~ 166 (611)
T 1nr0_A 89 TQTTHILKTTIPVFSGPVKDISWDSES-KRIAAVGEGRERFGHVFLFD-TGTSNGNLTGQARAMNSVDFKPSRPFRIISG 166 (611)
T ss_dssp SSTTCCEEEEEECSSSCEEEEEECTTS-CEEEEEECCSSCSEEEEETT-TCCBCBCCCCCSSCEEEEEECSSSSCEEEEE
T ss_pred CCCcceeeEeecccCCceEEEEECCCC-CEEEEEECCCCceeEEEEee-CCCCcceecCCCCCceEEEECCCCCeEEEEE
Confidence 3 332211 1122 3445688999888 7776665433 2444444 23322222111222344554422 223333
Q ss_pred CCCCEEEEEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccccC
Q psy5806 932 VQHSKIYRANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSRT 1011 (1332)
Q Consensus 932 ~~~~~i~~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p 1011 (1332)
..++.|..-+..+++.+. .+. ++.. ....+. --|.|-
T Consensus 167 s~D~~v~lwd~~~~~~~~---------~l~-----~H~~-------~V~~v~---------fspdg~------------- 203 (611)
T 1nr0_A 167 SDDNTVAIFEGPPFKFKS---------TFG-----EHTK-------FVHSVR---------YNPDGS------------- 203 (611)
T ss_dssp ETTSCEEEEETTTBEEEE---------EEC-----CCSS-------CEEEEE---------ECTTSS-------------
T ss_pred eCCCeEEEEECCCCeEee---------eec-----cccC-------ceEEEE---------ECCCCC-------------
Confidence 333333332222221111 000 0000 000000 012221
Q ss_pred cceEEEEeecceEEEEeCCCCCCCCcc-----cccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeec
Q psy5806 1012 REFLLYTSRFGVIRRISLDTADLLPVT-----LPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLM 1086 (1332)
Q Consensus 1012 ~~~ll~~~~~~~i~~i~l~~~~~~~~~-----~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~ 1086 (1332)
+|+....+..|+..++........+ ........+.+++|++.++.|.-.. ..++|+..++.++.....+...
T Consensus 204 --~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s-~D~~v~lWd~~~~~~~~~~~~~ 280 (611)
T 1nr0_A 204 --LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS-ADKTIKIWNVATLKVEKTIPVG 280 (611)
T ss_dssp --EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTTEEEEEEECC
T ss_pred --EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEe-CCCeEEEEeCCCCceeeeecCC
Confidence 2222222221444443322110000 0001223578999999887665544 7788999998754433333211
Q ss_pred CCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceE-EEEecCCCCceEEEEcCCCcEEEEEe
Q psy5806 1087 NDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHK-KILVNDLMEPLAIAVYPRRGLLFYSH 1149 (1332)
Q Consensus 1087 ~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~-~~~~~~~~~P~~iavdp~~g~Lywtd 1149 (1332)
.......+++.|.++.| ++-...+.|.+.++..... ..+..-.....+|+++|...+|+-+.
T Consensus 281 ~~~~~~~~~~~~~~~~l-~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s 343 (611)
T 1nr0_A 281 TRIEDQQLGIIWTKQAL-VSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSAD 343 (611)
T ss_dssp SSGGGCEEEEEECSSCE-EEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCccceeEEEEEcCCEE-EEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEe
Confidence 11112234555545555 4444566788888874433 33433345678999999666665544
No 284
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.19 E-value=2.7 Score=48.71 Aligned_cols=330 Identities=10% Similarity=0.046 Sum_probs=160.4
Q ss_pred CccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCC
Q psy5806 783 RTESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGT 862 (1332)
Q Consensus 783 ~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~ 862 (1332)
....+++++.++.|+.... .+.|.+.++........+. . .....++.-+..|.++.+-.. . ..|...++...
T Consensus 58 ~~~~~~~s~~g~~l~~~~~-d~~v~i~d~~~~~~~~~~~-~-~~~~~~~~~~~~~~~l~~~~~-d----g~i~iwd~~~~ 129 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARL-DGHDFLFNTIIRDGSKMLK-R-ADYTAVDTAKLQMRRFILGTT-E----GDIKVLDSNFN 129 (420)
T ss_dssp CCTTCEEEEEETTEEEEEE-TTEEEEEECCSEETTTTSC-S-CCEEEEEEECSSSCEEEEEET-T----SCEEEECTTSC
T ss_pred cccceeeeecCCeEEEEEc-CCcEEEEEecccceeeEEe-c-CCceEEEEEecCCCEEEEEEC-C----CCEEEEeCCCc
Confidence 3557889888888776654 4578887775432111111 1 122333333333544443322 2 35666666644
Q ss_pred CcEEEecc-cccCceeEEeCCCCCeEEEEeCCCCeEEEEccC-CCceeEEeccCCcceEEEEe--CCEEEEEeCCCCEEE
Q psy5806 863 NRAVFETE-VIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLA-TGRAKRAYAVQSHPYTLTVL--DYYVYWTDVQHSKIY 938 (1332)
Q Consensus 863 ~~~~l~~~-l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~d-G~~~~~l~~~~~~P~~la~~--~~~iywtD~~~~~i~ 938 (1332)
........ ......+++.+.+ +.|+.+ ...+.|...++. |.....+........++++. +..|+ +-..++.|.
T Consensus 130 ~~~~~~~~h~~~v~~~~~~~~~-~~l~s~-s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~v~ 206 (420)
T 3vl1_A 130 LQREIDQAHVSEITKLKFFPSG-EALISS-SQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVL-SASLDGTIR 206 (420)
T ss_dssp EEEEETTSSSSCEEEEEECTTS-SEEEEE-ETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEE-EEETTSCEE
T ss_pred ceeeecccccCccEEEEECCCC-CEEEEE-eCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEE-EEcCCCcEE
Confidence 33333223 4556688888877 555544 445778888875 44444443333344667776 33444 444556666
Q ss_pred EEECCCCeEEEeeeecCcceEEeccccCCCCCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccc-cCc-ceEE
Q psy5806 939 RANKYDVKDIVEFAQVDRPWLVRAAQNISFPNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFS-RTR-EFLL 1016 (1332)
Q Consensus 939 ~~~~~~g~~i~~~~~~~i~~~~~~~~~~~~~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~-~p~-~~ll 1016 (1332)
.-+..+++.+..... .... .++...+++....... -........++.. .|. .+|+
T Consensus 207 iwd~~~~~~~~~~~~---------~~~~---------~~~v~~~~~~~~~~~~-----~~~~~~~~v~~~~~s~~~~~l~ 263 (420)
T 3vl1_A 207 LWECGTGTTIHTFNR---------KENP---------HDGVNSIALFVGTDRQ-----LHEISTSKKNNLEFGTYGKYVI 263 (420)
T ss_dssp EEETTTTEEEEEECB---------TTBT---------TCCEEEEEEEECCCSS-----CGGGCCCCCCTTCSSCTTEEEE
T ss_pred EeECCCCceeEEeec---------CCCC---------CCCccEEEEecCCcce-----eeecccCcccceEEcCCCCEEE
Confidence 666666643332110 0000 0000001110000000 0000000011111 122 2344
Q ss_pred EEeecceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCC-ceeEeecCCCCceeeE
Q psy5806 1017 YTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTR-IKPIPLMNDTIRDNFV 1095 (1332)
Q Consensus 1017 ~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~-~~~i~~~~~~~p~glA 1095 (1332)
....+..|+..++...... ...+......+..++|++.++.++++-...+.|+..++.++.. ...+..........++
T Consensus 264 ~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~ 342 (420)
T 3vl1_A 264 AGHVSGVITVHNVFSKEQT-IQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVY 342 (420)
T ss_dssp EEETTSCEEEEETTTCCEE-EEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEE
T ss_pred EEcCCCeEEEEECCCCcee-EEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEE
Confidence 3333332666666433211 1111112235789999998873444444778999999886544 2333322233445555
Q ss_pred EEecCCeEEEEcCCCceEEEEeeCCc----------eEEEEecCCCCceEEEEcCCCc---EEEEEe
Q psy5806 1096 IDWVANNIYYIDSQMHTINVARSDGQ----------HKKILVNDLMEPLAIAVYPRRG---LLFYSH 1149 (1332)
Q Consensus 1096 vDw~~~~LY~td~~~~~I~v~~ldG~----------~~~~~~~~~~~P~~iavdp~~g---~Lywtd 1149 (1332)
.. .+.++++-...+.|.++++... ....+.........+++.|... .|+.+.
T Consensus 343 ~~--~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g 407 (420)
T 3vl1_A 343 FA--AGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVG 407 (420)
T ss_dssp EE--TTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEE
T ss_pred eC--CCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEc
Confidence 44 5667777777889999998642 1112223334567777777544 455554
No 285
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.17 E-value=0.0018 Score=61.07 Aligned_cols=40 Identities=28% Similarity=0.657 Sum_probs=34.5
Q ss_pred ccccCC--CCcceeeeccCCCceEEeCCCCceecCCCCCcCCC
Q psy5806 392 YQSHCA--PKVCSHICLPNKHRFTCQCPLGLTLSPDNKSCSES 432 (1332)
Q Consensus 392 ~~n~C~--~g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~~~ 432 (1332)
..|||. +++|+|.|++.+++|+|.|+.||++. ++++|.+.
T Consensus 28 d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~-~g~~C~di 69 (107)
T 2w2n_E 28 GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLV-AQRRCEDI 69 (107)
T ss_dssp SCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEE-TTTEEEC-
T ss_pred cCccCcCCCCCCCCEeEeCCCCeEEECCCCcccc-CCCccccc
Confidence 579998 57999999999999999999999985 67888754
No 286
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.14 E-value=1.1 Score=50.89 Aligned_cols=199 Identities=7% Similarity=-0.022 Sum_probs=117.8
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeE-eecCCCCceeeEEEec--CCeEEEEcCCCceEEEEeeCCce
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPI-PLMNDTIRDNFVIDWV--ANNIYYIDSQMHTINVARSDGQH 1122 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i-~~~~~~~p~glAvDw~--~~~LY~td~~~~~I~v~~ldG~~ 1122 (1332)
.+..++|++.++.|..+. ..+.|+..++..++..... +.........|++... ++.|+ +-...+.|.+++++...
T Consensus 13 ~v~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~ 90 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCS-SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILA-SCSYDGKVLIWKEENGR 90 (379)
T ss_dssp CEEEEEECSSSSEEEEEE-TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEE-EEETTSCEEEEEEETTE
T ss_pred cEEEEEEcCCCCEEEEEE-CCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEE-EeccCCEEEEEEcCCCc
Confidence 367899999888777665 5677888776533322221 2122335667777644 45554 44456789999998553
Q ss_pred ---EEEEecCCCCceEEEEcCC--CcEEEEEecCCCCCCCCCcEEEEecCCCc--eEEEEecCCCCcceEEEecC-----
Q psy5806 1123 ---KKILVNDLMEPLAIAVYPR--RGLLFYSHWGLYDNSPTTKIEKVYLDGSY--RTVLVEEDLAFPNELAIDFK----- 1190 (1332)
Q Consensus 1123 ---~~~~~~~~~~P~~iavdp~--~g~Lywtd~~~~~~~~~~~I~r~~ldG~~--~~~l~~~~l~~p~glaiD~~----- 1190 (1332)
...+.........|+++|. ..+|+.+... +.|...++.... ....+.........+++.+.
T Consensus 91 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 91 WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-------SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----
T ss_pred eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC-------CcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccc
Confidence 2223334456899999997 4455555432 467777775542 22233333345667888873
Q ss_pred -------CCEEEEEEcCCCeEEEEecCCCc-eEEEE-e----ecccceEEEecCCccccc--cEEEEEECCCCEEEEEEe
Q psy5806 1191 -------QRRLFWADSTNKRIEYCDFFGRS-RKIVI-S----KVAPYGLSVRQSPGKAFI--VELYWTDWEAMSVVIARE 1255 (1332)
Q Consensus 1191 -------~~~LY~~d~~~~~I~~~d~dG~~-~~~~~-~----~~~P~glav~~~~~~~~~--~~lYwtd~~~~~V~~~~~ 1255 (1332)
++.++++-...+.|...|+.... ...+. . .....+|++ .+.+ +.+..+-...+.|...+.
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~-----sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW-----SPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp ------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE-----CCCCSSSEEEEEEETTSCEEEEEE
T ss_pred ccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEE-----CCCCCCCCeEEEEeCCCEEEEEeC
Confidence 34444454567889998886443 22222 2 344567777 2221 344555556788888887
Q ss_pred cCC
Q psy5806 1256 KSD 1258 (1332)
Q Consensus 1256 ~~g 1258 (1332)
.++
T Consensus 239 ~~~ 241 (379)
T 3jrp_A 239 DNE 241 (379)
T ss_dssp SST
T ss_pred CCC
Confidence 765
No 287
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.12 E-value=0.21 Score=64.00 Aligned_cols=199 Identities=7% Similarity=0.020 Sum_probs=112.4
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCC------------------CCceeeEEEecCCeEEEEc
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMND------------------TIRDNFVIDWVANNIYYID 1107 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~------------------~~p~glAvDw~~~~LY~td 1107 (1332)
.....+|+|.+++|.++. .+.|+..++.+|.. ..+...+. +...+++..+.++.|.++.
T Consensus 113 ~~~~~~~SPdG~~la~~~--~~~i~~~~~~~~~~-~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 113 NTQWVTWSPVGHKLAYVW--NNDIYVKIEPNLPS-YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp TEEEEEECSSTTCEEEEE--TTEEEEESSTTSCC-EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred cceeeEECCCCCEEEEEE--CCeEEEEECCCCce-EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 467888999988888774 46788877664332 22221111 2223577777788776652
Q ss_pred C--C---------------------------------CceEEEEeeCC---c---eEEEEec------CCCCceEEEEcC
Q psy5806 1108 S--Q---------------------------------MHTINVARSDG---Q---HKKILVN------DLMEPLAIAVYP 1140 (1332)
Q Consensus 1108 ~--~---------------------------------~~~I~v~~ldG---~---~~~~~~~------~~~~P~~iavdp 1140 (1332)
. . ..+|.++++++ . ....+.. .......++..|
T Consensus 190 ~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp 269 (740)
T 4a5s_A 190 FNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 269 (740)
T ss_dssp EECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE
T ss_pred EcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC
Confidence 1 1 01456667765 3 2222321 122345677888
Q ss_pred CCcEE-EEEecCCCCCCCCCcEEEEecCCCc-------eEEEE-ecCCCC-----cceEEEecCCCEEE-EEEc--CCCe
Q psy5806 1141 RRGLL-FYSHWGLYDNSPTTKIEKVYLDGSY-------RTVLV-EEDLAF-----PNELAIDFKQRRLF-WADS--TNKR 1203 (1332)
Q Consensus 1141 ~~g~L-ywtd~~~~~~~~~~~I~r~~ldG~~-------~~~l~-~~~l~~-----p~glaiD~~~~~LY-~~d~--~~~~ 1203 (1332)
....+ |+.+... ....|...++++.. ...++ ...-.+ +...++.++++.|+ |.-. +...
T Consensus 270 dg~~~~~~~~r~~----~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~ 345 (740)
T 4a5s_A 270 QERISLQWLRRIQ----NYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRH 345 (740)
T ss_dssp TTEEEEEEEESST----TEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEE
T ss_pred CCeEEEEEeCCCC----CEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceE
Confidence 54423 3344332 23468888887655 22232 211111 34678888988877 6632 3456
Q ss_pred EEEEecCCCceEEEEe-ecccceE-EEecCCccccccEEEEEECC------CCEEEEEEecCC
Q psy5806 1204 IEYCDFFGRSRKIVIS-KVAPYGL-SVRQSPGKAFIVELYWTDWE------AMSVVIAREKSD 1258 (1332)
Q Consensus 1204 I~~~d~dG~~~~~~~~-~~~P~gl-av~~~~~~~~~~~lYwtd~~------~~~V~~~~~~~g 1258 (1332)
|..++.+|...+.+.. ......+ .. ++++||++-.. ...|++++..++
T Consensus 346 l~~~~~~~~~~~~lT~g~~~v~~~~~~-------d~~~i~f~~~~~~~~~~~~~ly~v~~~g~ 401 (740)
T 4a5s_A 346 ICYFQIDKKDCTFITKGTWEVIGIEAL-------TSDYLYYISNEYKGMPGGRNLYKIQLIDY 401 (740)
T ss_dssp EEEEETTCSSCEESCCSSSCEEEEEEE-------CSSEEEEEESCGGGCTTCBEEEEEETTEE
T ss_pred EEEEECCCCceEecccCCEEEEEEEEE-------eCCEEEEEEecCCCCCceeEEEEEECCCC
Confidence 9999999877665554 2222222 35 47888888754 357888876544
No 288
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.12 E-value=0.28 Score=62.28 Aligned_cols=198 Identities=12% Similarity=0.053 Sum_probs=115.6
Q ss_pred EEEEEeCCCcEEEEEeCCC------------CeEEEEECCCCCCceeEeecCCC----CceeeEEEecCCeEEEEcC---
Q psy5806 1048 IFFDYHYSKNLIYFADMRS------------GNLRTFDMSDSTRIKPIPLMNDT----IRDNFVIDWVANNIYYIDS--- 1108 (1332)
Q Consensus 1048 ~~id~d~~~~~lY~sd~~~------------~~I~~~~l~~g~~~~~i~~~~~~----~p~glAvDw~~~~LY~td~--- 1108 (1332)
.+++|. .++.||++.... ..|++.++..+....+.+..... .-.++++++.++.|+++..
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 356788 788888886442 35888887643332233322222 2346788888888877643
Q ss_pred CCceEEEEeeCCc--eEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCce---EEEEecCCCCcc
Q psy5806 1109 QMHTINVARSDGQ--HKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYR---TVLVEEDLAFPN 1183 (1332)
Q Consensus 1109 ~~~~I~v~~ldG~--~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~---~~l~~~~l~~p~ 1183 (1332)
..+.|.+.++++. ..+.+......-... +++..+.||+..... .+..+|+++++++... +.++...-..
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~---~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-- 330 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRD---APNRRLVTVDAANPGPAHWRDLIPERQQV-- 330 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTT---CTTCEEEEEETTSCCGGGCEEEECCCSSC--
T ss_pred CCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCC---CCCCEEEEEeCCCCCccccEEEecCCCCE--
Confidence 2357888888643 233343333332333 566677887765332 2357899999987654 5565533222
Q ss_pred eEEEecCCCEEEEEEcCCC--eEEEEecCCCceEEEEe--ecccceEEEecCCccccccEEEEEEC---CCCEEEEEEec
Q psy5806 1184 ELAIDFKQRRLFWADSTNK--RIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDW---EAMSVVIAREK 1256 (1332)
Q Consensus 1184 glaiD~~~~~LY~~d~~~~--~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~---~~~~V~~~~~~ 1256 (1332)
+.+++.++.|+++....+ +|..++++|...+.+.- .....+++. +..++.|+++-. .-.+|++++..
T Consensus 331 -~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~-----~~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 331 -LTVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNG-----KHDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp -EEEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCC-----CTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred -EEEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEeeec-----CCCCCEEEEEecCCCCCCEEEEEECC
Confidence 266666888888765543 78999999875444321 111112222 224455655532 23678888876
Q ss_pred CC
Q psy5806 1257 SD 1258 (1332)
Q Consensus 1257 ~g 1258 (1332)
++
T Consensus 405 ~g 406 (693)
T 3iuj_A 405 SG 406 (693)
T ss_dssp TC
T ss_pred CC
Confidence 65
No 289
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=96.11 E-value=0.0017 Score=58.67 Aligned_cols=42 Identities=29% Similarity=0.759 Sum_probs=35.3
Q ss_pred CccccccCC--CCcce-eeeccCCCceEEeCCCCceecCCCCCcC
Q psy5806 389 QPNYQSHCA--PKVCS-HICLPNKHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 389 qp~~~n~C~--~g~Cs-hlCl~~~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
.+.+.++|. +..|. +.|++.+++|+|.|+.||++.+++++|.
T Consensus 42 ~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~~Ci 86 (86)
T 1lmj_A 42 NCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 86 (86)
T ss_dssp SEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCCC
T ss_pred ccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCCCCccC
Confidence 345678887 34576 6999999999999999999999999984
No 290
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.06 E-value=0.95 Score=51.21 Aligned_cols=198 Identities=8% Similarity=-0.035 Sum_probs=116.2
Q ss_pred cceEEEEEeCCC---cEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCc
Q psy5806 1045 MSSIFFDYHYSK---NLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQ 1121 (1332)
Q Consensus 1045 ~~~~~id~d~~~---~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~ 1121 (1332)
..+.+++|.+.. +.++++-...+.|...++.++.....+. .....+..|++.+..+++.++-...+.|.++++...
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 148 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV-GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD 148 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE-SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec-CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC
Confidence 346788898773 3455555578899999987544333332 344567889998734455555555778999999744
Q ss_pred -eEEEE---ecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEe---------------------
Q psy5806 1122 -HKKIL---VNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVE--------------------- 1176 (1332)
Q Consensus 1122 -~~~~~---~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~--------------------- 1176 (1332)
....+ ......+..|+++|...+|+.+... +.|...++........+.
T Consensus 149 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (366)
T 3k26_A 149 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD-------HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHF 221 (366)
T ss_dssp EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT-------SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECC
T ss_pred eEEEEecccccccCceeEEEECCCCCEEEEecCC-------CCEEEEECCCCccccccceeEEecCCCCcccccceeecc
Confidence 33334 2344568999999966566555432 457777775432111000
Q ss_pred -------cCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCce------------EEEEe----ecccceEEEecCCc
Q psy5806 1177 -------EDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSR------------KIVIS----KVAPYGLSVRQSPG 1233 (1332)
Q Consensus 1177 -------~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~------------~~~~~----~~~P~glav~~~~~ 1233 (1332)
..-.....++++ ++ ++++-...+.|...|+..... ..+.. ......|++
T Consensus 222 ~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----- 293 (366)
T 3k26_A 222 PDFSTRDIHRNYVDCVRWL--GD-LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRF----- 293 (366)
T ss_dssp CSEEECSSCSSCCCEEEEE--TT-EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCC-----
T ss_pred CccccccCCcceEEEEEEc--CC-EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEE-----
Confidence 012334566766 44 444555678888888764322 22222 233455555
Q ss_pred ccc-ccEEEEEECCCCEEEEEEecCC
Q psy5806 1234 KAF-IVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1234 ~~~-~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.+. ++.+.++-...+.|...+..++
T Consensus 294 s~~~~~~~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 294 SMDFWQKMLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp EECTTSSEEEEECTTSCEEEEECCSS
T ss_pred cCCCCCcEEEEEecCCcEEEEECCCC
Confidence 112 1344444457788999998776
No 291
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.04 E-value=0.0026 Score=64.82 Aligned_cols=40 Identities=30% Similarity=0.611 Sum_probs=35.4
Q ss_pred ccccCC---CCcceeeeccCCCceEEeCCCCceecCCCCCcCC
Q psy5806 392 YQSHCA---PKVCSHICLPNKHRFTCQCPLGLTLSPDNKSCSE 431 (1332)
Q Consensus 392 ~~n~C~---~g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~~ 431 (1332)
..++|. ++.|+|.|.+.+++|+|.|+.||+|..|+++|+.
T Consensus 116 d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 116 DINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp ECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred cCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCCCcccc
Confidence 357887 3579999999999999999999999999999964
No 292
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=95.92 E-value=0.0025 Score=57.60 Aligned_cols=44 Identities=27% Similarity=0.729 Sum_probs=38.2
Q ss_pred CCccccccCCCCcceeeeccCCCceEEeCC--CCceecCCCCCcCC
Q psy5806 388 RQPNYQSHCAPKVCSHICLPNKHRFTCQCP--LGLTLSPDNKSCSE 431 (1332)
Q Consensus 388 ~qp~~~n~C~~g~CshlCl~~~~~~~C~C~--~G~~L~~d~~tC~~ 431 (1332)
+.+...++|..+.|.+.|++.+++|+|.|| .||.+..|+++|++
T Consensus 40 ~~C~dideC~~~~C~~~C~n~~g~y~C~C~g~~G~~~~~~~~~C~d 85 (87)
T 1z6c_A 40 KSCEDIDECSENMCAQLCVNYPGGYTCYCDGKKGFKLAQDQKSCEV 85 (87)
T ss_dssp TEEECCCHHHHSCCSSEECCCSSSCCEECCSSSCCBCCTTSSSCBC
T ss_pred CcCCCcCeeCCCCCCCEEEccCCCEEEECCCCcCCcccCCCCcceE
Confidence 445567899877899999999999999995 89999999999975
No 293
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.90 E-value=0.63 Score=59.01 Aligned_cols=181 Identities=10% Similarity=0.076 Sum_probs=102.7
Q ss_pred EEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCC------------CeEEEEECCCCCCceeEeecCC---
Q psy5806 1024 IRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRS------------GNLRTFDMSDSTRIKPIPLMND--- 1088 (1332)
Q Consensus 1024 i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~------------~~I~~~~l~~g~~~~~i~~~~~--- 1088 (1332)
|+.+++++..... ...++... ..+++|.+.++.||++.... ..|++.++.++....+++....
T Consensus 149 i~v~dl~tg~~~~-~~~~~~~~-~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~ 226 (695)
T 2bkl_A 149 LHVIDVDSGEWSK-VDVIEGGK-YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDP 226 (695)
T ss_dssp EEEEETTTCCBCS-SCCBSCCT-TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCT
T ss_pred EEEEECCCCCCcC-CcccCccc-ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCC
Confidence 7777776543220 11223222 15788999999999987533 2399999874433223332221
Q ss_pred CCceeeEEEecCCeEEEEcCC---CceEEEEeeCCceEEEEecCCCCceEEEEcCCCcEEEEE-ecCCCCCCCCCcEEEE
Q psy5806 1089 TIRDNFVIDWVANNIYYIDSQ---MHTINVARSDGQHKKILVNDLMEPLAIAVYPRRGLLFYS-HWGLYDNSPTTKIEKV 1164 (1332)
Q Consensus 1089 ~~p~glAvDw~~~~LY~td~~---~~~I~v~~ldG~~~~~~~~~~~~P~~iavdp~~g~Lywt-d~~~~~~~~~~~I~r~ 1164 (1332)
....++++++.++.|+++... ...|.+++..+...+.+..........+. +..+ ||+. +++. ...+|+++
T Consensus 227 ~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~----~~~~l~~~ 300 (695)
T 2bkl_A 227 TTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGA----PRQRVFEV 300 (695)
T ss_dssp TCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTC----TTCEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCC----CCCEEEEE
Confidence 234578888888888876433 33566666543333333333333344333 4455 6555 4331 35789999
Q ss_pred ecCCCce---EEEEecC-CCCcceEEEecCCCEEEEEEcCC--CeEEEEecCCCce
Q psy5806 1165 YLDGSYR---TVLVEED-LAFPNELAIDFKQRRLFWADSTN--KRIEYCDFFGRSR 1214 (1332)
Q Consensus 1165 ~ldG~~~---~~l~~~~-l~~p~glaiD~~~~~LY~~d~~~--~~I~~~d~dG~~~ 1214 (1332)
++++... +.++... -....+++++ +++|+++.... .+|+.++++|...
T Consensus 301 d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~ 354 (695)
T 2bkl_A 301 DPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPV 354 (695)
T ss_dssp BTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEE
T ss_pred eCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCee
Confidence 9977552 4555432 1224556666 67788776543 4577788877643
No 294
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.88 E-value=1.4 Score=50.44 Aligned_cols=172 Identities=13% Similarity=0.084 Sum_probs=106.3
Q ss_pred eEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEec-CCeEEEEcCCCceEEEEeeC-CceEE
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWV-ANNIYYIDSQMHTINVARSD-GQHKK 1124 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~-~~~LY~td~~~~~I~v~~ld-G~~~~ 1124 (1332)
+.++.|.+.+..|+-+. ..++|+..++..+.....+. ........+++.+. .+++.++-...+.|.++++. |+...
T Consensus 157 v~~~~~~~~~~~l~t~s-~D~~v~lwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~ 234 (354)
T 2pbi_B 157 LSACSFTNSDMQILTAS-GDGTCALWDVESGQLLQSFH-GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQ 234 (354)
T ss_dssp EEEEEECSSSSEEEEEE-TTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEE
T ss_pred EEEEEEeCCCCEEEEEe-CCCcEEEEeCCCCeEEEEEc-CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 56888888887776554 67889999987554333332 22334566777654 34555666667789999987 55444
Q ss_pred EEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecC--CCCcceEEEecCCCEEEEEEcCCC
Q psy5806 1125 ILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEED--LAFPNELAIDFKQRRLFWADSTNK 1202 (1332)
Q Consensus 1125 ~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~--l~~p~glaiD~~~~~LY~~d~~~~ 1202 (1332)
.+..-.....+|+++|....| .+-... +.|...++.......+.... ......+++.+++..|+.. ...+
T Consensus 235 ~~~~h~~~v~~v~~~p~~~~l-~s~s~D------~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g-~~d~ 306 (354)
T 2pbi_B 235 AFETHESDVNSVRYYPSGDAF-ASGSDD------ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAG-YNDY 306 (354)
T ss_dssp EECCCSSCEEEEEECTTSSEE-EEEETT------SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEE-ETTS
T ss_pred EecCCCCCeEEEEEeCCCCEE-EEEeCC------CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEE-ECCC
Confidence 454434567899999955444 444332 45777777654443333321 1234577888777766655 4667
Q ss_pred eEEEEecC-CCceEEEEe-ecccceEEE
Q psy5806 1203 RIEYCDFF-GRSRKIVIS-KVAPYGLSV 1228 (1332)
Q Consensus 1203 ~I~~~d~d-G~~~~~~~~-~~~P~glav 1228 (1332)
.|...|+. |.....+.. .....+|++
T Consensus 307 ~i~vwd~~~~~~~~~l~~h~~~v~~l~~ 334 (354)
T 2pbi_B 307 TINVWDVLKGSRVSILFGHENRVSTLRV 334 (354)
T ss_dssp CEEEEETTTCSEEEEECCCSSCEEEEEE
T ss_pred cEEEEECCCCceEEEEECCCCcEEEEEE
Confidence 89988885 433333322 455667777
No 295
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=95.84 E-value=0.0032 Score=62.72 Aligned_cols=38 Identities=24% Similarity=0.555 Sum_probs=34.1
Q ss_pred cCCCCcceeeeccCCC-ceEEeCCCCceecCCCCCcCCC
Q psy5806 395 HCAPKVCSHICLPNKH-RFTCQCPLGLTLSPDNKSCSES 432 (1332)
Q Consensus 395 ~C~~g~CshlCl~~~~-~~~C~C~~G~~L~~d~~tC~~~ 432 (1332)
+|.+++|+|.|++..+ +|+|.|+.||+|..||++|...
T Consensus 92 ~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~ 130 (142)
T 2c4f_L 92 VNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPT 130 (142)
T ss_dssp TTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEEES
T ss_pred cCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCCCC
Confidence 3458899999999999 9999999999999999999754
No 296
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.82 E-value=2.2 Score=48.01 Aligned_cols=117 Identities=9% Similarity=-0.046 Sum_probs=74.4
Q ss_pred cceEEEEEeCCC--cEEEEEeCCCCeEEEEECCCCCCce-eEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCc
Q psy5806 1045 MSSIFFDYHYSK--NLIYFADMRSGNLRTFDMSDSTRIK-PIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQ 1121 (1332)
Q Consensus 1045 ~~~~~id~d~~~--~~lY~sd~~~~~I~~~~l~~g~~~~-~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~ 1121 (1332)
..+..++|++.+ +.+.++-...+.|+..++....... .........+..|++.+.++.|+.+. ..+.|.++++...
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~ 118 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS-CDKTAKMWDLSSN 118 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTT
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc-CCCcEEEEEcCCC
Confidence 356899999986 4555555577889888877422222 33333455788999998677776554 4678999999865
Q ss_pred eEEEEecCCCCceEEEE--cCCCcEEEEEecCCCCCCCCCcEEEEecCCC
Q psy5806 1122 HKKILVNDLMEPLAIAV--YPRRGLLFYSHWGLYDNSPTTKIEKVYLDGS 1169 (1332)
Q Consensus 1122 ~~~~~~~~~~~P~~iav--dp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~ 1169 (1332)
....+.........+++ +| .+.++++-... +.|...++...
T Consensus 119 ~~~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~d------g~i~vwd~~~~ 161 (368)
T 3mmy_A 119 QAIQIAQHDAPVKTIHWIKAP-NYSCVMTGSWD------KTLKFWDTRSS 161 (368)
T ss_dssp EEEEEEECSSCEEEEEEEECS-SCEEEEEEETT------SEEEEECSSCS
T ss_pred CceeeccccCceEEEEEEeCC-CCCEEEEccCC------CcEEEEECCCC
Confidence 54444334456788998 77 44444443322 35666665433
No 297
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.82 E-value=0.56 Score=53.16 Aligned_cols=158 Identities=9% Similarity=0.045 Sum_probs=100.6
Q ss_pred ceEEEEEeCC----CcEEEEEeCCCCeEEEEECCCCCCceeEeec----CCCCceeeEEEecC---CeEEEEcCCCceEE
Q psy5806 1046 SSIFFDYHYS----KNLIYFADMRSGNLRTFDMSDSTRIKPIPLM----NDTIRDNFVIDWVA---NNIYYIDSQMHTIN 1114 (1332)
Q Consensus 1046 ~~~~id~d~~----~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~----~~~~p~glAvDw~~---~~LY~td~~~~~I~ 1114 (1332)
.+.+++|++. +..++.+. ..+.|...++..+.....+... .......+++.+.. +.+.++-...+.|.
T Consensus 20 ~v~~i~~~p~~~~~~~~~~~~~-~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~ 98 (366)
T 3k26_A 20 PLFGVQFNWHSKEGDPLVFATV-GSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIR 98 (366)
T ss_dssp CEEEEEECTTCCTTSCEEEEEE-ETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEE
T ss_pred ceEEEEEecccCCCCceEEEEC-CCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEE
Confidence 3578888873 44444444 5568888887644433333211 12456788888763 34555555677999
Q ss_pred EEeeC-CceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEE---ecCCCCcceEEEecC
Q psy5806 1115 VARSD-GQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLV---EEDLAFPNELAIDFK 1190 (1332)
Q Consensus 1115 v~~ld-G~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~---~~~l~~p~glaiD~~ 1190 (1332)
++++. ++....+.........|+++|..+.++.+-... +.|...++........+ ...-..+..|+++++
T Consensus 99 v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 99 IINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD------HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp EECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT------SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT
T ss_pred EEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC------CeEEEEEeecCeEEEEecccccccCceeEEEECCC
Confidence 99987 554444554456789999999555555554333 46888888765544444 223356778899988
Q ss_pred CCEEEEEEcCCCeEEEEecCC
Q psy5806 1191 QRRLFWADSTNKRIEYCDFFG 1211 (1332)
Q Consensus 1191 ~~~LY~~d~~~~~I~~~d~dG 1211 (1332)
++.|+.+. ..+.|...|+..
T Consensus 173 ~~~l~~~~-~dg~i~i~d~~~ 192 (366)
T 3k26_A 173 GEKIMSCG-MDHSLKLWRINS 192 (366)
T ss_dssp SSEEEEEE-TTSCEEEEESCS
T ss_pred CCEEEEec-CCCCEEEEECCC
Confidence 77777664 567898888864
No 298
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.82 E-value=5.5 Score=49.01 Aligned_cols=64 Identities=8% Similarity=-0.142 Sum_probs=38.9
Q ss_pred CeEEEEeCCCCeEEEEcc--CCCceeEEeccC-----------CcceEEEEeCCEEEEEeCCCCEEEEEECCCCeEEE
Q psy5806 885 PKLYWVDTSKHTIEYKTL--ATGRAKRAYAVQ-----------SHPYTLTVLDYYVYWTDVQHSKIYRANKYDVKDIV 949 (1332)
Q Consensus 885 ~~lYw~d~~~~~I~~~~~--dG~~~~~l~~~~-----------~~P~~la~~~~~iywtD~~~~~i~~~~~~~g~~i~ 949 (1332)
++||++....+.+..+|. +|..+-...... ....++++.++.||.... .+.++.++..+|+++.
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 63 DMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-NGHLLALDAKTGKINW 139 (571)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-TSEEEEEETTTCCEEE
T ss_pred CEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-CCEEEEEECCCCCEEE
Confidence 466666543456666665 444332221110 011356788999999854 5789999999996554
No 299
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.80 E-value=0.003 Score=65.11 Aligned_cols=41 Identities=29% Similarity=0.794 Sum_probs=37.3
Q ss_pred CCcccCCCCC---CccccccCCCCccccCCCCeeEccCCccccc
Q psy5806 969 PNACGSNNGG---CSHLCLRNPTNFTCACPTGILLSADRRSCFS 1009 (1332)
Q Consensus 969 ~n~C~~~nGg---CshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~ 1009 (1332)
.++|...+++ |+|.|..+++++.|.|+.||.|..|+++|++
T Consensus 124 i~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~ 167 (170)
T 1szb_A 124 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 167 (170)
T ss_dssp CCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred cCcccCCCCCCCccCCccccCCCCEEEeCCCCcEECCCCCcccc
Confidence 5789887776 9999999999999999999999999999974
No 300
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.78 E-value=2.8 Score=53.46 Aligned_cols=196 Identities=11% Similarity=0.042 Sum_probs=116.8
Q ss_pred ceEEEEEeCCCcEEEEEeCCCC----eEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCC-----------
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSG----NLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQM----------- 1110 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~----~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~----------- 1110 (1332)
...++.+++++++|.++....| .|+.+++++|....... ... ...+++..+. +.||++....
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~-~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~ 240 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWV-KFSGLAWLGN-DALLYSRFAEPKEGQAFQALN 240 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEE-ESCCCEESTT-SEEEEEECCCC--------CC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCc-eeccEEEECC-CEEEEEEecCcccccccccCC
Confidence 3567889999998877654333 59999988554332211 111 1245666666 7888875432
Q ss_pred --ceEEEEeeCCce--EEEEecCCCC---ceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCC--c-eEEEEecCCC
Q psy5806 1111 --HTINVARSDGQH--KKILVNDLME---PLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGS--Y-RTVLVEEDLA 1180 (1332)
Q Consensus 1111 --~~I~v~~ldG~~--~~~~~~~~~~---P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~--~-~~~l~~~~l~ 1180 (1332)
..|.+.++.+.. ...+...... -.+++++|...+|+++.... ......|+..++++. . .+.|... ..
T Consensus 241 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~--~~~~~~l~~~d~~~~~~~~~~~l~~~-~~ 317 (741)
T 1yr2_A 241 YNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG--TDPVNTVHVARVTNGKIGPVTALIPD-LK 317 (741)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT--TCSCCEEEEEEEETTEECCCEEEECS-SS
T ss_pred CCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc--CCCcceEEEEECCCCCCcccEEecCC-CC
Confidence 247777775332 2233333232 46889999777888776432 112468999999776 4 4444432 22
Q ss_pred CcceEEEecCCCEEEEEEcC---CCeEEEEecCC--CceEEEEe--ecccceEEEecCCccccccEEEEEECCCC--EEE
Q psy5806 1181 FPNELAIDFKQRRLFWADST---NKRIEYCDFFG--RSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAM--SVV 1251 (1332)
Q Consensus 1181 ~p~glaiD~~~~~LY~~d~~---~~~I~~~d~dG--~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~--~V~ 1251 (1332)
.... .+++++++||+.... +.+|..+++++ ...+.++. .....+++. .+++|+++-...+ +|+
T Consensus 318 ~~~~-~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~-------~~~~lv~~~~~dg~~~l~ 389 (741)
T 1yr2_A 318 AQWD-FVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGI-------AGNRLFASYIHDAKSQVL 389 (741)
T ss_dssp SCEE-EEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEE-------EBTEEEEEEEETTEEEEE
T ss_pred ceEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEE-------ECCEEEEEEEECCEEEEE
Confidence 2122 245788999887542 56799999987 34455554 223446677 6778887765443 455
Q ss_pred EEEe
Q psy5806 1252 IARE 1255 (1332)
Q Consensus 1252 ~~~~ 1255 (1332)
.++.
T Consensus 390 ~~~~ 393 (741)
T 1yr2_A 390 AFDL 393 (741)
T ss_dssp EEET
T ss_pred EEeC
Confidence 6654
No 301
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=95.72 E-value=0.0032 Score=63.01 Aligned_cols=44 Identities=27% Similarity=0.723 Sum_probs=38.1
Q ss_pred CccccccCC--CCcceeee-ccCCCceEEeCCCCceecCCCCCcCCC
Q psy5806 389 QPNYQSHCA--PKVCSHIC-LPNKHRFTCQCPLGLTLSPDNKSCSES 432 (1332)
Q Consensus 389 qp~~~n~C~--~g~CshlC-l~~~~~~~C~C~~G~~L~~d~~tC~~~ 432 (1332)
.+...++|. +++|.|.| ++..++|+|.|+.||+|..||++|...
T Consensus 81 ~C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~ 127 (146)
T 1x7a_L 81 NCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPA 127 (146)
T ss_dssp TTCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTTSSSEEEC
T ss_pred cCCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCCcCCCC
Confidence 345568898 57899999 999999999999999999999999754
No 302
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.71 E-value=2.6 Score=47.30 Aligned_cols=197 Identities=7% Similarity=0.020 Sum_probs=115.2
Q ss_pred eEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCc---e-eEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-Cc
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRI---K-PIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQ 1121 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~---~-~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~ 1121 (1332)
+.+++|.+.+..+.++-...++|+..++...... . ..+.........+++...++.|+ +-...+.|.++++. |+
T Consensus 20 V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~-s~s~D~~v~~wd~~~~~ 98 (319)
T 3frx_A 20 VTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYAL-SASWDKTLRLWDVATGE 98 (319)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTE
T ss_pred EEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEE-EEeCCCEEEEEECCCCC
Confidence 5688888876555666667888877765421111 0 11112234567888987666665 44456789999997 54
Q ss_pred eEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCC-----CEEEE
Q psy5806 1122 HKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQ-----RRLFW 1196 (1332)
Q Consensus 1122 ~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~-----~~LY~ 1196 (1332)
....+..-......|+++|...+| .+-... ..|..-++.+.....+.. .......+++.+.. ..+.+
T Consensus 99 ~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D------~~i~vwd~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~l~ 170 (319)
T 3frx_A 99 TYQRFVGHKSDVMSVDIDKKASMI-ISGSRD------KTIKVWTIKGQCLATLLG-HNDWVSQVRVVPNEKADDDSVTII 170 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEE-EEEETT------SCEEEEETTSCEEEEECC-CSSCEEEEEECCC------CCEEE
T ss_pred eeEEEccCCCcEEEEEEcCCCCEE-EEEeCC------CeEEEEECCCCeEEEEec-cCCcEEEEEEccCCCCCCCccEEE
Confidence 444454444568899999955444 444333 456666777655443332 22344556665432 23445
Q ss_pred EEcCCCeEEEEecCCCceEEEE-e-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1197 ADSTNKRIEYCDFFGRSRKIVI-S-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1197 ~d~~~~~I~~~d~dG~~~~~~~-~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
+-...+.|...|+......... . .....+|++ .+ ++.+..+-...+.|...+..++
T Consensus 171 s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~-----sp-~g~~l~s~~~dg~i~iwd~~~~ 228 (319)
T 3frx_A 171 SAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTA-----SP-DGTLIASAGKDGEIMLWNLAAK 228 (319)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCCSCEEEEEE-----CT-TSSEEEEEETTCEEEEEETTTT
T ss_pred EEeCCCEEEEEECCcchhheeecCCCCcEEEEEE-----cC-CCCEEEEEeCCCeEEEEECCCC
Confidence 5566778888888644322222 2 445567777 22 3334445456678888887666
No 303
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.70 E-value=1.3 Score=49.40 Aligned_cols=199 Identities=11% Similarity=-0.049 Sum_probs=113.4
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEe---ecCCCCceeeEEEec-CCeEEEEcCCCceEEEEeeCCc
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIP---LMNDTIRDNFVIDWV-ANNIYYIDSQMHTINVARSDGQ 1121 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~---~~~~~~p~glAvDw~-~~~LY~td~~~~~I~v~~ldG~ 1121 (1332)
.+..++|++.++.|+.+. ..+.|+..++..+....... ......+..|++.+. .+++.++-...+.|.+++++..
T Consensus 13 ~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~ 91 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCS-SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPD 91 (351)
T ss_dssp CEEEEEECSSSSEEEEEE-TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTT
T ss_pred ceeEEEEcCCCCEEEEee-CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCC
Confidence 467899999887776654 67889888877544322221 223346778888764 2444455555678999999753
Q ss_pred ----------eEEEEecCCCCceEEEEcCC--CcEEEEEecCCCCCCCCCcEEEEecCCCceE-EEE-----e-------
Q psy5806 1122 ----------HKKILVNDLMEPLAIAVYPR--RGLLFYSHWGLYDNSPTTKIEKVYLDGSYRT-VLV-----E------- 1176 (1332)
Q Consensus 1122 ----------~~~~~~~~~~~P~~iavdp~--~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~-~l~-----~------- 1176 (1332)
....+........+|+++|. ..+|+.+.. . +.|...++...... .+. .
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 92 QEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN-D------GILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp SCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-T------CEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred cccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC-C------CcEEEecCCChHHhccccccccccccccccC
Confidence 12224334456889999996 444544443 2 45666665433311 100 0
Q ss_pred cCCCCcceEEEecC---CCEEEEEEcCCCeEEEEecCCCceEEEEe----ecccceEEEecCCccccc---cEEEEEECC
Q psy5806 1177 EDLAFPNELAIDFK---QRRLFWADSTNKRIEYCDFFGRSRKIVIS----KVAPYGLSVRQSPGKAFI---VELYWTDWE 1246 (1332)
Q Consensus 1177 ~~l~~p~glaiD~~---~~~LY~~d~~~~~I~~~d~dG~~~~~~~~----~~~P~glav~~~~~~~~~---~~lYwtd~~ 1246 (1332)
........+++.++ .+.|..+. ..+.+...+........+.. .....+|++ .+.+ ..++.+-..
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~-----~p~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSA-LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISW-----APSIGRWYQLIATGCK 238 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEE-TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEE-----CCCSSCSSEEEEEEET
T ss_pred CcccceeEEEeccCCCCCcEEEEec-CCCcEEEEccCCCceeeeeecCCCCcceeEEEE-----CCCCCCcceEEEEEcC
Confidence 12234556777765 55555554 44455444443333322322 334567777 1222 156666667
Q ss_pred CCEEEEEEecCC
Q psy5806 1247 AMSVVIAREKSD 1258 (1332)
Q Consensus 1247 ~~~V~~~~~~~g 1258 (1332)
.+.|...+..++
T Consensus 239 dg~i~iwd~~~~ 250 (351)
T 3f3f_A 239 DGRIRIFKITEK 250 (351)
T ss_dssp TSCEEEEEEEEC
T ss_pred CCeEEEEeCCCC
Confidence 788888887664
No 304
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.65 E-value=1.1 Score=53.04 Aligned_cols=198 Identities=10% Similarity=0.005 Sum_probs=113.2
Q ss_pred Ccccccc-C-cc-eEEEEeecceEEEEeCCCCCCCCcccccCC-ccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCC
Q psy5806 1004 RRSCFSR-T-RE-FLLYTSRFGVIRRISLDTADLLPVTLPFPE-YMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTR 1079 (1332)
Q Consensus 1004 ~~tC~~~-p-~~-~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~-~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~ 1079 (1332)
..+|..- | .+ .|+....+..|+.-+++..... ......+ ...+.+|+|++.++.++++-...++|+..++. +..
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~-~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~-~~~ 198 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP-TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK-GNI 198 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC-EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT-SCE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce-eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc-CCc
Confidence 3456543 3 33 3444444332666666544322 2222222 33467999998665555666678899999987 333
Q ss_pred ceeEeecCC--CCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCC
Q psy5806 1080 IKPIPLMND--TIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSP 1157 (1332)
Q Consensus 1080 ~~~i~~~~~--~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~ 1157 (1332)
...+..... .....++++..++.|. +-...+.|.+++++|+....+..-.....+|+++|....++.+-...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d----- 272 (435)
T 4e54_B 199 LRVFASSDTINIWFCSLDVSASSRMVV-TGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVD----- 272 (435)
T ss_dssp EEEEECCSSCSCCCCCEEEETTTTEEE-EECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETT-----
T ss_pred eeEEeccCCCCccEEEEEECCCCCEEE-EEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCc-----
Confidence 333332221 1345788887665554 44556789999998875544433345678999999777677665433
Q ss_pred CCcEEEEecCCCc-eEEEEe--cCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCC
Q psy5806 1158 TTKIEKVYLDGSY-RTVLVE--EDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFG 1211 (1332)
Q Consensus 1158 ~~~I~r~~ldG~~-~~~l~~--~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG 1211 (1332)
..|..-++.... ...+.. ..-...+.++++++++.|.-+ ...+.|...|+..
T Consensus 273 -~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~-~~D~~i~iwd~~~ 327 (435)
T 4e54_B 273 -QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTT-DQKSEIRVYSASQ 327 (435)
T ss_dssp -SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEE-ESSSCEEEEESSS
T ss_pred -ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEE-cCCCEEEEEECCC
Confidence 334444443222 111111 111234567788877777655 4667888888853
No 305
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=95.60 E-value=0.0059 Score=61.09 Aligned_cols=42 Identities=31% Similarity=0.785 Sum_probs=38.1
Q ss_pred CCcccCCCCCCcccc-ccCCCCccccCCCCeeEccCCcccccc
Q psy5806 969 PNACGSNNGGCSHLC-LRNPTNFTCACPTGILLSADRRSCFSR 1010 (1332)
Q Consensus 969 ~n~C~~~nGgCshlC-l~~p~~~~C~Cp~g~~l~~d~~tC~~~ 1010 (1332)
.++|..++++|.|.| ..++++|+|.|+.||.|..|+++|...
T Consensus 85 ~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~ 127 (146)
T 1x7a_L 85 DATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPA 127 (146)
T ss_dssp ECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTTSSSEEEC
T ss_pred CccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCCcCCCC
Confidence 478998889999999 999999999999999999999999843
No 306
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=95.58 E-value=0.082 Score=67.39 Aligned_cols=222 Identities=7% Similarity=-0.037 Sum_probs=122.3
Q ss_pred cceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCC------------
Q psy5806 1021 FGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMND------------ 1088 (1332)
Q Consensus 1021 ~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~------------ 1088 (1332)
.. |+..+++...... ..++. ..+..++|+|.+++|.++. .+.|+..++.+|... .+...+.
T Consensus 90 ~~-i~~~d~~~g~~~~-~~~l~--~~~~~~~~SPDG~~la~~~--~~~i~~~~~~~g~~~-~l~~~~~~~~v~~g~~~~v 162 (719)
T 1z68_A 90 AT-YYIYDLSNGEFVR-GNELP--RPIQYLCWSPVGSKLAYVY--QNNIYLKQRPGDPPF-QITFNGRENKIFNGIPDWV 162 (719)
T ss_dssp EE-EEEEETTTTEECC-SSCCC--SSBCCEEECSSTTCEEEEE--TTEEEEESSTTSCCE-ECCCCCBTTTEEESSCCHH
T ss_pred eE-EEEEECCCCcccc-ceecC--cccccceECCCCCEEEEEE--CCeEEEEeCCCCCcE-EEecCCCcCCeEcccccce
Confidence 44 7777776443200 01222 2356788999998888874 568888887643322 2221111
Q ss_pred ------CCceeeEEEecCCeEEEEcCC---------------------------------CceEEEEeeCCceEE---EE
Q psy5806 1089 ------TIRDNFVIDWVANNIYYIDSQ---------------------------------MHTINVARSDGQHKK---IL 1126 (1332)
Q Consensus 1089 ------~~p~glAvDw~~~~LY~td~~---------------------------------~~~I~v~~ldG~~~~---~~ 1126 (1332)
+...++++.+.++.|+++... ...|.++++++.... .+
T Consensus 163 ~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~ 242 (719)
T 1z68_A 163 YEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEV 242 (719)
T ss_dssp HHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEEC
T ss_pred eeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEc
Confidence 122478888888888876422 115667777754321 11
Q ss_pred e------cCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEe----cCCCceEEEE----ecCCCCcc-----eEEE
Q psy5806 1127 V------NDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVY----LDGSYRTVLV----EEDLAFPN-----ELAI 1187 (1332)
Q Consensus 1127 ~------~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~----ldG~~~~~l~----~~~l~~p~-----glai 1187 (1332)
. ........++.+|. |.++++.... ......|+..+ +++.....++ ...-.+.. .+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~SpD-~~~~~~~~~~--~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (719)
T 1z68_A 243 PVPAMIASSDYYFSWLTWVTD-ERVCLQWLKR--VQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVF 319 (719)
T ss_dssp CCCHHHHTSCEEEEEEEESSS-SEEEEEEEES--STTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEE
T ss_pred cCCccCCCCcceEEEeEEeCC-CeEEEEEecc--ccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEE
Confidence 1 11223578899996 6666652221 01235688888 6554433333 11112222 6788
Q ss_pred ecCCCEEEEE-Ec--CCCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECC------CCEEEEEEecC
Q psy5806 1188 DFKQRRLFWA-DS--TNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWE------AMSVVIAREKS 1257 (1332)
Q Consensus 1188 D~~~~~LY~~-d~--~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~------~~~V~~~~~~~ 1257 (1332)
.++++.||+. .. +..+|...+++|...+.+.. .....++.. . .+++||++... ...|++++..+
T Consensus 320 spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~-----~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~ 393 (719)
T 1z68_A 320 SYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFR-----V-TQDSLFYSSNEFEEYPGRRNIYRISIGS 393 (719)
T ss_dssp CTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEE-----E-CSSEEEEEESCGGGCTTCBEEEEEECSS
T ss_pred CCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEE-----E-eCCEEEEEEecCCCCCceEEEEEEeCCC
Confidence 8888888774 22 24468888988766444433 222234444 1 46677777643 34567776544
Q ss_pred C
Q psy5806 1258 D 1258 (1332)
Q Consensus 1258 g 1258 (1332)
|
T Consensus 394 g 394 (719)
T 1z68_A 394 Y 394 (719)
T ss_dssp S
T ss_pred C
Confidence 3
No 307
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=95.43 E-value=3.3 Score=52.37 Aligned_cols=161 Identities=11% Similarity=-0.014 Sum_probs=90.8
Q ss_pred ceEEEEEeCCCcEEEEE--eCCC--CeEEEEE----CCCCCCceeEe---ecCCCCce-----eeEEEecCCeEEEE-cC
Q psy5806 1046 SSIFFDYHYSKNLIYFA--DMRS--GNLRTFD----MSDSTRIKPIP---LMNDTIRD-----NFVIDWVANNIYYI-DS 1108 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~s--d~~~--~~I~~~~----l~~g~~~~~i~---~~~~~~p~-----glAvDw~~~~LY~t-d~ 1108 (1332)
.+..++|.+.+ +++++ +... ..|..++ +.+|....++. ....+... .+++.+.++.||+. ..
T Consensus 254 ~~~~~~~SpD~-~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 332 (719)
T 1z68_A 254 YFSWLTWVTDE-RVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSD 332 (719)
T ss_dssp EEEEEEESSSS-EEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEEC
T ss_pred eEEEeEEeCCC-eEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEc
Confidence 35688999985 55554 3222 3588888 66443332221 11112222 67888778888773 22
Q ss_pred --CCceEEEEeeCCceEEEEecCCCCceEEEEcCCCcEEEEEecC--CCCCCCCCcEEEEecCCCce-EEEEecCC----
Q psy5806 1109 --QMHTINVARSDGQHKKILVNDLMEPLAIAVYPRRGLLFYSHWG--LYDNSPTTKIEKVYLDGSYR-TVLVEEDL---- 1179 (1332)
Q Consensus 1109 --~~~~I~v~~ldG~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~--~~~~~~~~~I~r~~ldG~~~-~~l~~~~l---- 1179 (1332)
+...|.+.++++...+.+..+.....+++.. ..+.||++... . ......|+++++++... ...+...+
T Consensus 333 ~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~--~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~ 409 (719)
T 1z68_A 333 KDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEE--YPGRRNIYRISIGSYPPSKKCVTCHLRKER 409 (719)
T ss_dssp TTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGG--CTTCBEEEEEECSSSSCCEEESSTTTTTTT
T ss_pred cCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCC--CCceEEEEEEeCCCCCCCceeccCccCCCC
Confidence 2446777888765544454433334566655 67889988754 1 11346799999965431 22222111
Q ss_pred CCcceEEEecCCCEEEEEEcC--CCeEEEEecC
Q psy5806 1180 AFPNELAIDFKQRRLFWADST--NKRIEYCDFF 1210 (1332)
Q Consensus 1180 ~~p~glaiD~~~~~LY~~d~~--~~~I~~~d~d 1210 (1332)
.....+++.++++.|+++-+. ...+...|+.
T Consensus 410 ~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~ 442 (719)
T 1z68_A 410 CQYYTASFSDYAKYYALVCYGPGIPISTLHDGR 442 (719)
T ss_dssp BCBEEEEECGGGSSEEEEECCBSSCEEEEECSS
T ss_pred CceEEEEECCCCCEEEEEcCCCCCCeEEEEECC
Confidence 122356777778887766433 2456666774
No 308
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=95.37 E-value=0.0052 Score=55.51 Aligned_cols=42 Identities=29% Similarity=0.730 Sum_probs=34.7
Q ss_pred ccccCCCC--cc-eeeeccCCCceEEeCCCCceecCCCCCcCCCc
Q psy5806 392 YQSHCAPK--VC-SHICLPNKHRFTCQCPLGLTLSPDNKSCSESP 433 (1332)
Q Consensus 392 ~~n~C~~g--~C-shlCl~~~~~~~C~C~~G~~L~~d~~tC~~~~ 433 (1332)
+.|+|+.. .| .+.|++.+++|+|.|+.||++.+++++|+...
T Consensus 2 dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~did 46 (87)
T 1z6c_A 2 DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDID 46 (87)
T ss_dssp CSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCC
T ss_pred ccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcC
Confidence 35788733 38 56899999999999999999999999997543
No 309
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.36 E-value=3 Score=46.27 Aligned_cols=189 Identities=9% Similarity=-0.007 Sum_probs=100.2
Q ss_pred eEEEEeecceEEEEeCCCCCCC-CcccccC-CccceEEEEEeCC--CcEEEEEeCCCCeEEEEECCCCCCc--------e
Q psy5806 1014 FLLYTSRFGVIRRISLDTADLL-PVTLPFP-EYMSSIFFDYHYS--KNLIYFADMRSGNLRTFDMSDSTRI--------K 1081 (1332)
Q Consensus 1014 ~ll~~~~~~~i~~i~l~~~~~~-~~~~pi~-~~~~~~~id~d~~--~~~lY~sd~~~~~I~~~~l~~g~~~--------~ 1081 (1332)
+|+.+..+..|+..++...... .....+. ....+.+++|.+. ++.|+ +-...+.|+..++..+... .
T Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~-s~~~dg~v~vwd~~~~~~~~~~~~~~~~ 103 (351)
T 3f3f_A 25 HVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIA-SASYDKTVKLWEEDPDQEECSGRRWNKL 103 (351)
T ss_dssp EEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEE-EEETTSCEEEEEECTTSCTTSSCSEEEE
T ss_pred EEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEE-EEcCCCeEEEEecCCCcccccccCccee
Confidence 4444444332555565533211 1111112 2234679999985 44454 4446788988887754321 1
Q ss_pred eEeecCCCCceeeEEEec--CCeEEEEcCCCceEEEEeeCC-ceEEE------Ee-------cCCCCceEEEEcCC---C
Q psy5806 1082 PIPLMNDTIRDNFVIDWV--ANNIYYIDSQMHTINVARSDG-QHKKI------LV-------NDLMEPLAIAVYPR---R 1142 (1332)
Q Consensus 1082 ~i~~~~~~~p~glAvDw~--~~~LY~td~~~~~I~v~~ldG-~~~~~------~~-------~~~~~P~~iavdp~---~ 1142 (1332)
.........+..|++.+. +..|+.+ ...+.|.++++.. +.... +. ........++.+|. .
T Consensus 104 ~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 182 (351)
T 3f3f_A 104 CTLNDSKGSLYSVKFAPAHLGLKLACL-GNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSP 182 (351)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEE-ETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSC
T ss_pred eeecccCCceeEEEEcCCCCCcEEEEe-cCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCC
Confidence 122223446788998877 5555544 4567899999863 21110 10 23345678888885 4
Q ss_pred cEEEEEecCCCCCCCCCcEEEEecCCCceEEEE--ecCCCCcceEEEecCCC---EEEEEEcCCCeEEEEecCC
Q psy5806 1143 GLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLV--EEDLAFPNELAIDFKQR---RLFWADSTNKRIEYCDFFG 1211 (1332)
Q Consensus 1143 g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~--~~~l~~p~glaiD~~~~---~LY~~d~~~~~I~~~d~dG 1211 (1332)
..|..+... ..+............+. ...-.....+++.+++. .++.+-...+.|...|+..
T Consensus 183 ~~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 183 EKLAVSALE-------QAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp CEEEEEETT-------EEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred cEEEEecCC-------CcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 444444332 23333333232222221 11224466788887763 5555556778888888764
No 310
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.30 E-value=0.92 Score=50.96 Aligned_cols=193 Identities=13% Similarity=0.001 Sum_probs=116.8
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCc--eeEeecCCCCceeeEEEecCC-eEEEEcCCCceEEEEee-CCc
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRI--KPIPLMNDTIRDNFVIDWVAN-NIYYIDSQMHTINVARS-DGQ 1121 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~--~~i~~~~~~~p~glAvDw~~~-~LY~td~~~~~I~v~~l-dG~ 1121 (1332)
.+.+++|++.++.|+.+. ..+.|+..++..+... ..........+..+++...++ .|+.+. ..+.|.++++ .+.
T Consensus 13 ~v~~~~~s~~~~~l~~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~ 90 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITS-WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT-VQGEILKVDLIGSP 90 (342)
T ss_dssp CEEEEEEEGGGTEEEEEE-TTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEE-TTSCEEEECSSSSS
T ss_pred cEEEEEEcCCCCEEEEEc-CCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEc-CCCeEEEEEeccCC
Confidence 467999999888777665 6788888887644411 112223345678899998777 676655 4568999999 766
Q ss_pred eEEEEec--CCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCC---------CceEEEEecCCCCcceEEEecC
Q psy5806 1122 HKKILVN--DLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDG---------SYRTVLVEEDLAFPNELAIDFK 1190 (1332)
Q Consensus 1122 ~~~~~~~--~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG---------~~~~~l~~~~l~~p~glaiD~~ 1190 (1332)
....+.. .......|+++| ...|+..... +.|...++.. ......+. .-..+..++++++
T Consensus 91 ~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 91 SFQALTNNEANLGICRICKYG-DDKLIAASWD-------GLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSS 161 (342)
T ss_dssp SEEECBSCCCCSCEEEEEEET-TTEEEEEETT-------SEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSS
T ss_pred ceEeccccCCCCceEEEEeCC-CCEEEEEcCC-------CeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCC
Confidence 5555544 445678999999 6666655433 4566666643 11111111 1234566777644
Q ss_pred CCEEEEEEcCCCeEEEEecCC-Cc--eEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecC
Q psy5806 1191 QRRLFWADSTNKRIEYCDFFG-RS--RKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKS 1257 (1332)
Q Consensus 1191 ~~~LY~~d~~~~~I~~~d~dG-~~--~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~ 1257 (1332)
. |+.+ ...+.|...|+.. .. ...... ...+..|++ .+.++.++++-...+.|...+...
T Consensus 162 ~--l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~-----~~~~~~~l~~~~~dg~i~i~~~~~ 225 (342)
T 1yfq_A 162 R--LIVG-MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVAL-----LPKEQEGYACSSIDGRVAVEFFDD 225 (342)
T ss_dssp E--EEEE-ESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEE-----CSGGGCEEEEEETTSEEEEEECCT
T ss_pred c--EEEE-eCCCeEEEEECCccccccceeeecCCCCceeEEEE-----CCCCCCEEEEEecCCcEEEEEEcC
Confidence 3 5555 4667899999876 32 222222 455677788 220344455555677777766543
No 311
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.29 E-value=2.3 Score=49.74 Aligned_cols=239 Identities=12% Similarity=0.053 Sum_probs=128.0
Q ss_pred ceEEEEeecceEEEEeCCC---CCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECC---CCCCceeEeec
Q psy5806 1013 EFLLYTSRFGVIRRISLDT---ADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMS---DSTRIKPIPLM 1086 (1332)
Q Consensus 1013 ~~ll~~~~~~~i~~i~l~~---~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~---~g~~~~~i~~~ 1086 (1332)
.+|+....+..|+.-++.. .........+.....+.+++|.+.++.|+.+. ..+.|...+++ .+.........
T Consensus 77 ~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~dg~i~vwd~~~~~~~~~~~~~~~~ 155 (437)
T 3gre_A 77 PYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSS-KDGQIIVLKVNHYQQESEVKFLNCE 155 (437)
T ss_dssp CEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEE-TTSEEEEEEEEEEEETTEEEEEEEE
T ss_pred CEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEe-CCCEEEEEEeccccCCceeeccccc
Confidence 4555555544366555543 21111112222234578999998777666554 67888777763 12221111100
Q ss_pred -----------CCCCceeeEEEe-cCCeEEEEcCCCceEEEEeeC-CceEEEEec--CCCCceEEEEcCCCcEEEEEecC
Q psy5806 1087 -----------NDTIRDNFVIDW-VANNIYYIDSQMHTINVARSD-GQHKKILVN--DLMEPLAIAVYPRRGLLFYSHWG 1151 (1332)
Q Consensus 1087 -----------~~~~p~glAvDw-~~~~LY~td~~~~~I~v~~ld-G~~~~~~~~--~~~~P~~iavdp~~g~Lywtd~~ 1151 (1332)
....+..++.-+ ..+++.++-...+.|.++++. ++....+.. .......|+++|...+|+.....
T Consensus 156 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 235 (437)
T 3gre_A 156 CIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR 235 (437)
T ss_dssp EEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT
T ss_pred eeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC
Confidence 111222333211 124455555567799999997 444444543 34678999999965555544432
Q ss_pred CCCCCCCCcEEEEecCCCceEEEEe-cCCCCcceEEEec---CCCEEEEEEcCCCeEEEEecCCC-ceEEEEe-e-----
Q psy5806 1152 LYDNSPTTKIEKVYLDGSYRTVLVE-EDLAFPNELAIDF---KQRRLFWADSTNKRIEYCDFFGR-SRKIVIS-K----- 1220 (1332)
Q Consensus 1152 ~~~~~~~~~I~r~~ldG~~~~~l~~-~~l~~p~glaiD~---~~~~LY~~d~~~~~I~~~d~dG~-~~~~~~~-~----- 1220 (1332)
+.|...++........+. ..-.....|++.+ .++++.++-...+.|...|+... ....+.. .
T Consensus 236 -------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 308 (437)
T 3gre_A 236 -------GIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSM 308 (437)
T ss_dssp -------SCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCG
T ss_pred -------CeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCcc
Confidence 457777765433322222 1112234554443 23445555566777888888633 3333331 1
Q ss_pred ---------------------cccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEec
Q psy5806 1221 ---------------------VAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRS 1269 (1332)
Q Consensus 1221 ---------------------~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~ 1269 (1332)
....+|++ .++.++++-...+.|...+..++ .....+..
T Consensus 309 ~~~~~~~~~l~~~~~~~~~~~~~v~~l~~-------~~~~~l~s~~~d~~i~~wd~~~~---~~~~~~~~ 368 (437)
T 3gre_A 309 EHFLPIEKGLEELNFCGIRSLNALSTISV-------SNDKILLTDEATSSIVMFSLNEL---SSSKAVIS 368 (437)
T ss_dssp GGGSCBCSSGGGCCCCCCCSGGGGCCEEE-------ETTEEEEEEGGGTEEEEEETTCG---GGCEEEEC
T ss_pred ceecccccccccceecccccCCceEEEEE-------CCceEEEecCCCCeEEEEECCCc---ccceEEec
Confidence 11345677 45567777778899999998887 55555543
No 312
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.24 E-value=6 Score=45.71 Aligned_cols=198 Identities=10% Similarity=0.029 Sum_probs=113.7
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCC-ceEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDG-QHKK 1124 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG-~~~~ 1124 (1332)
.+.+++|.+.++.|+-+. ..+.|+..++.++.....+ .....+..+++.+..+++.++....+.|.++++.. ....
T Consensus 167 ~v~~~~~~p~~~~l~s~s-~d~~v~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~ 243 (393)
T 1erj_A 167 DIYSLDYFPSGDKLVSGS-GDRTVRIWDLRTGQCSLTL--SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVE 243 (393)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSEEEEEETTTTEEEEEE--ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEE
T ss_pred CEEEEEEcCCCCEEEEec-CCCcEEEEECCCCeeEEEE--EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 467899999888776554 7788999998744322222 23345678888875566666666677899999874 3333
Q ss_pred EEe-------cCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCc------------eEEEEecCCCCcceE
Q psy5806 1125 ILV-------NDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSY------------RTVLVEEDLAFPNEL 1185 (1332)
Q Consensus 1125 ~~~-------~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~------------~~~l~~~~l~~p~gl 1185 (1332)
.+. .-.....+|+++|...+|+-... . +.|..-++.... ....+...-.....+
T Consensus 244 ~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~-d------~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 316 (393)
T 1erj_A 244 RLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL-D------RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSV 316 (393)
T ss_dssp EEC------CCCSSCEEEEEECTTSSEEEEEET-T------SEEEEEEC---------------CEEEEEECCSSCEEEE
T ss_pred eecccccCCCCCCCCEEEEEECCCCCEEEEEeC-C------CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEE
Confidence 331 12245788999996555544432 2 345555553321 111111122345577
Q ss_pred EEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe--ecccceEEEecCCccc--cccEEEEEECCCCEEEEEEec
Q psy5806 1186 AIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKA--FIVELYWTDWEAMSVVIAREK 1256 (1332)
Q Consensus 1186 aiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~--~~~~lYwtd~~~~~V~~~~~~ 1256 (1332)
++.++++.|.- -...+.|...|.........+. .....++++ +++.. .++.++.+-...+.|...+..
T Consensus 317 ~~~~~~~~l~s-gs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~--~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 317 ATTQNDEYILS-GSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAV--ANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp EECGGGCEEEE-EETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--CSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred EECCCCCEEEE-EeCCCeEEEEECCCCeEEEEECCCCCCEEEEEe--cCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 88877666654 3566788888876443322222 344556666 11111 134566666667777666543
No 313
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.22 E-value=10 Score=48.29 Aligned_cols=358 Identities=13% Similarity=0.085 Sum_probs=184.6
Q ss_pred cceEEEEEEccCCeEEEEcCCCceEEEEEecCcceEEEEeCCCCCCccEEEeccCCeEEEEeCCCCeEEEEeCCCCCcEE
Q psy5806 467 KSVVAIAWESANDSLYWADVENGEINRAHINGTFQYNVIRHNTKKPAGVAIDWRTNKLYWTESEYNWIEVSNLDGTYPTL 546 (1332)
Q Consensus 467 ~~~~~i~~d~~~~~lywsD~~~~~I~r~~~~g~~~~~v~~~~~~~p~glAvDw~~~~lYw~d~~~~~I~v~~l~g~~~~~ 546 (1332)
..+.+++|++....|.... .++.|.-.++........+...-..+.++++.+.++.|.... ..+.|.+-++.......
T Consensus 14 ~~v~~i~~sp~~~~la~~~-~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vw~~~~~~~~~ 91 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTL-YSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS-DDFRIRVFNYNTGEKVV 91 (814)
T ss_dssp SCEEEEEECSSSSEEEEEE-TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE-TTSEEEEEETTTCCEEE
T ss_pred CceEEEEECCCCCEEEEEe-CCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEe-CCCeEEEEECCCCcEEE
Confidence 4567889998766666654 567777777654333333443445677899988777666654 46889999986544333
Q ss_pred EEeCCCCCceEEEEecCCCeEEEEecCCCCceEEEcCCCC-ceEEEEeCCCCCceeeEEeccCCeEEEEeCCCCeEEEEe
Q psy5806 547 LFWQNLSEPRDIAVNPIGGIMYWCSWGDLHKIEMAGMDGS-HRHILASDSLKNPTGLAIDLENSRLYWANVGLKTIEFTN 625 (1332)
Q Consensus 547 l~~~~~~~P~~iavdp~~G~lywtd~g~~~~I~r~~~dG~-~~~~l~~~~l~~p~glaiD~~~~rLYw~d~~~~~I~~~~ 625 (1332)
.+.......+.+++.|...+|+-.... ..|..-+++.. .....+...-.....+++.+.++.++.+-...+.|...+
T Consensus 92 ~~~~~~~~v~~~~~s~~~~~l~~~~~d--g~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd 169 (814)
T 3mkq_A 92 DFEAHPDYIRSIAVHPTKPYVLSGSDD--LTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWS 169 (814)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETT--SEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred EEecCCCCEEEEEEeCCCCEEEEEcCC--CEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 333455678899999987777755532 34444444443 233333333345567787774444444444445565555
Q ss_pred cCCCceEEEEeecceEEEeeecCceeEEEEeCCCCcCcCCCcCCCCCCccccccCCCCCceeeCCCCccccCCCCccccC
Q psy5806 626 LDGTRKQTLIALHHLKVMTKVVGLTDIDIFHRRRSKKTHPCNENNGGCSHLCLIAPKDGIRCVCPAGNLLREDRRTCSEN 705 (1332)
Q Consensus 626 ~dG~~~~~~~~~~~l~v~~~~~~~~~i~v~~~~~q~~~~pC~~~nggCs~lCl~~~~~~~~C~Cp~g~~l~~d~~tC~~~ 705 (1332)
+.+........ . . ..++. ...+-.|. +
T Consensus 170 ~~~~~~~~~~~--------------------~-----~-----~~~~v----------~~~~~~~~-----~-------- 196 (814)
T 3mkq_A 170 LGQSTPNFTLT--------------------T-----G-----QERGV----------NYVDYYPL-----P-------- 196 (814)
T ss_dssp TTCSSCSEEEE--------------------C-----C-----CTTCC----------CEEEECCS-----T--------
T ss_pred CCCCcceeEEe--------------------c-----C-----CCCCE----------EEEEEEEC-----C--------
Confidence 54322111100 0 0 00000 01111110 0
Q ss_pred CccceEee-ccceeEEEecCCCCCcceeeecc-cccceeEEeecCCCceEEEEecCCCceEEEecCCCCceEEEeCCCCC
Q psy5806 706 PSKFLLVS-QTDKIRQISLDVEYRYPIVLPLR-QLKMVASVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVVNDLNR 783 (1332)
Q Consensus 706 ~~~~ll~s-~~~~i~~i~l~~~~~~~~~~~~~-~~~~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~~~~ 783 (1332)
...+|+.+ ....|+..++.... ....+. ....+.++.+.+....++ +-...+.|...++........+......
T Consensus 197 ~~~~l~~~~~dg~i~~~d~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~v~vwd~~~~~~~~~~~~~~~~ 272 (814)
T 3mkq_A 197 DKPYMITASDDLTIKIWDYQTKS---CVATLEGHMSNVSFAVFHPTLPIII-SGSEDGTLKIWNSSTYKVEKTLNVGLER 272 (814)
T ss_dssp TCCEEEEECTTSEEEEEETTTTE---EEEEEECCSSCEEEEEECSSSSEEE-EEETTSCEEEEETTTCSEEEEECCSSSS
T ss_pred CCCEEEEEeCCCEEEEEECCCCc---EEEEEcCCCCCEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCcEEEEeecCCCc
Confidence 11222222 23345555544321 111111 234567888888755444 4445677877777654444444444556
Q ss_pred ccceeEecCCCeEEEEeCCCCeEEEEeCCCCceEEEEecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecC---
Q psy5806 784 TESIAVDAIGRKIYWTDMNAQTIMVSDIDGKNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMD--- 860 (1332)
Q Consensus 784 p~glAvD~~~~nLYwtD~~~~~I~v~~ldG~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~d--- 860 (1332)
+..+++.+.++++|.+-...+.+.+.++... ...++++|. |.++++..... ....+......
T Consensus 273 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~-g~~~~~~~~~~--~~~~~~~~~~~~~~ 337 (814)
T 3mkq_A 273 SWCIATHPTGRKNYIASGFDNGFTVLSLGND------------EPTLSLDPV-GKLVWSGGKNA--AASDIFTAVIRGNE 337 (814)
T ss_dssp EEEEEECTTCGGGEEEEEETTEEEEEECSCC------------SCCEEECSS-SEEEEECCTTS--CTTCEEEEECCSCC
T ss_pred EEEEEEccCCCceEEEEEeCCCEEEEEcCCC------------CceeEECCC-CCEEEECcccc--cceeeeeeeccccc
Confidence 7778888777776655554555555554321 234566665 56655432111 01223333222
Q ss_pred ----CCC----cEEEecccccCceeEEeCCCCCeEEEEeCCCCeEEEEccC
Q psy5806 861 ----GTN----RAVFETEVIWPSCLAIDYSDNPKLYWVDTSKHTIEYKTLA 903 (1332)
Q Consensus 861 ----G~~----~~~l~~~l~~P~gl~iD~~~~~~lYw~d~~~~~I~~~~~d 903 (1332)
|.. ...+...-..|..+++.+.+ +.|..+. .+.+...++.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~la~~~--~~~~~i~~~~ 385 (814)
T 3mkq_A 338 EVEQDEPLSLQTKELGSVDVFPQSLAHSPNG-RFVTVVG--DGEYVIYTAL 385 (814)
T ss_dssp CCCSSSCBCCCCEEECCCSSCCSEEEECTTS-SEEEEEE--TTEEEEEETT
T ss_pred ccccCccceeeeecCCCCccCCceeEECCCC-CEEEEec--CCEEEEEECc
Confidence 111 11111113356788888877 6665554 4566555544
No 314
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.20 E-value=2.2 Score=53.84 Aligned_cols=198 Identities=8% Similarity=-0.016 Sum_probs=122.4
Q ss_pred eEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCc----eeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCC-c
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRI----KPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDG-Q 1121 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~----~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG-~ 1121 (1332)
+.+|++.+.+..++.+-...++|+..++..+... .............+++.+.++.|. +-...+.|.++++.. .
T Consensus 385 V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~-sgs~Dg~v~vwd~~~~~ 463 (694)
T 3dm0_A 385 VTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFAL-SGSWDGELRLWDLAAGV 463 (694)
T ss_dssp EEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTE
T ss_pred eEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEE-EEeCCCcEEEEECCCCc
Confidence 5678888776667777768888988887643221 112222334577899987666664 545567999999974 4
Q ss_pred eEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecC---CCCcceEEEecCC-CEEEEE
Q psy5806 1122 HKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEED---LAFPNELAIDFKQ-RRLFWA 1197 (1332)
Q Consensus 1122 ~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~---l~~p~glaiD~~~-~~LY~~ 1197 (1332)
....+..-......|+++|...+|.-.. .. ..|..-++.+.....+.... ......+++.++. +.+.++
T Consensus 464 ~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~D------~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s 536 (694)
T 3dm0_A 464 STRRFVGHTKDVLSVAFSLDNRQIVSAS-RD------RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVS 536 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEE-TT------SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEE
T ss_pred ceeEEeCCCCCEEEEEEeCCCCEEEEEe-CC------CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEE
Confidence 4444544445678999999655554443 22 45666666665444443221 1235567777654 345555
Q ss_pred EcCCCeEEEEecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1198 DSTNKRIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1198 d~~~~~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
-...+.|...|+........+. .....+|++ . .++.+..+-...+.|...+..++
T Consensus 537 ~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~-----s-pdg~~l~sg~~Dg~i~iwd~~~~ 593 (694)
T 3dm0_A 537 ASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAV-----S-PDGSLCASGGKDGVVLLWDLAEG 593 (694)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEE-----C-TTSSEEEEEETTSBCEEEETTTT
T ss_pred EeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEE-----e-CCCCEEEEEeCCCeEEEEECCCC
Confidence 5677889988887554333332 445667787 2 23445555556788888887766
No 315
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=95.20 E-value=0.0057 Score=63.98 Aligned_cols=39 Identities=26% Similarity=0.727 Sum_probs=35.4
Q ss_pred ccCC--CCcceeeeccCCCceEEeCCCCceecCCCCCcCCC
Q psy5806 394 SHCA--PKVCSHICLPNKHRFTCQCPLGLTLSPDNKSCSES 432 (1332)
Q Consensus 394 n~C~--~g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~~~ 432 (1332)
++|. ++.|.|.|++..++|+|.|+.||.|..||++|...
T Consensus 82 deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~ 122 (195)
T 1nfu_B 82 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPT 122 (195)
T ss_dssp CGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEES
T ss_pred ccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCccccC
Confidence 7888 57899999999999999999999999999999754
No 316
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=95.18 E-value=0.0081 Score=61.29 Aligned_cols=41 Identities=29% Similarity=0.792 Sum_probs=35.6
Q ss_pred ccccccCC--CCccee-eeccCCCceEEeCCCCceecCCCCCcC
Q psy5806 390 PNYQSHCA--PKVCSH-ICLPNKHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 390 p~~~n~C~--~g~Csh-lCl~~~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
..++++|. ++.|.| .|++.+++|+|.|+.||++..|+++|+
T Consensus 119 c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 119 LEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD 162 (162)
T ss_dssp EEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred cCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCCCCCccC
Confidence 35678887 467875 999999999999999999999999994
No 317
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=95.16 E-value=0.0054 Score=61.54 Aligned_cols=41 Identities=34% Similarity=0.899 Sum_probs=35.4
Q ss_pred ccccccCC--CCccee-eeccCCCceEEeCCCCceecCCCCCcC
Q psy5806 390 PNYQSHCA--PKVCSH-ICLPNKHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 390 p~~~n~C~--~g~Csh-lCl~~~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
+.++++|. ++.|.| .|++.+++|+|.|+.||++..|+++|.
T Consensus 104 C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C~ 147 (147)
T 2w86_A 104 CEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL 147 (147)
T ss_dssp EEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCBC
T ss_pred cCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCeeC
Confidence 44578887 566876 899999999999999999999999984
No 318
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.12 E-value=7 Score=45.84 Aligned_cols=224 Identities=10% Similarity=0.013 Sum_probs=123.0
Q ss_pred cceEEEEeecceEEEEeCCCCCCCCcccccCC-ccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCC
Q psy5806 1012 REFLLYTSRFGVIRRISLDTADLLPVTLPFPE-YMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTI 1090 (1332)
Q Consensus 1012 ~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~-~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~ 1090 (1332)
..+|+....+..|+..++.... ....+.+ ...+..++++ ++.| ++-...+.|+..++.++.....+. .....
T Consensus 129 g~~l~sg~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~--~~~l-~s~~~dg~i~vwd~~~~~~~~~~~-~h~~~ 201 (445)
T 2ovr_B 129 GNRIVSGSDDNTLKVWSAVTGK---CLRTLVGHTGGVWSSQMR--DNII-ISGSTDRTLKVWNAETGECIHTLY-GHTST 201 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTCC---EEEECCCCSSCEEEEEEE--TTEE-EEEETTSCEEEEETTTTEEEEEEC-CCSSC
T ss_pred CCEEEEEECCCcEEEEECCCCc---EEEEEcCCCCCEEEEEec--CCEE-EEEeCCCeEEEEECCcCcEEEEEC-CCCCc
Confidence 3455544444336666665332 1222222 2345678887 3444 444478899999987543332222 22334
Q ss_pred ceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCC
Q psy5806 1091 RDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGS 1169 (1332)
Q Consensus 1091 p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~ 1169 (1332)
...++++ ++.|+. -...+.|.++++. ++....+.........++.++ ..|+.... . +.|...++...
T Consensus 202 v~~~~~~--~~~l~s-~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~-d------g~i~iwd~~~~ 269 (445)
T 2ovr_B 202 VRCMHLH--EKRVVS-GSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG--RRVVSGAY-D------FMVKVWDPETE 269 (445)
T ss_dssp EEEEEEE--TTEEEE-EETTSEEEEEESSSCCEEEEEECCSSCEEEEEECS--SCEEEEET-T------SCEEEEEGGGT
T ss_pred EEEEEec--CCEEEE-EeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECC--CEEEEEcC-C------CEEEEEECCCC
Confidence 5666665 666654 4456789999987 444444544445667777743 34444432 2 45777777554
Q ss_pred ceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECCC
Q psy5806 1170 YRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEA 1247 (1332)
Q Consensus 1170 ~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~ 1247 (1332)
.....+...-.....+++ +++.|+.+ ...+.|...|+.......... .....+++. .++.|+ +-...
T Consensus 270 ~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-------~~~~l~-~~~~d 338 (445)
T 2ovr_B 270 TCLHTLQGHTNRVYSLQF--DGIHVVSG-SLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-------KDNILV-SGNAD 338 (445)
T ss_dssp EEEEEECCCSSCEEEEEE--CSSEEEEE-ETTSCEEEEETTTCCEEEEECCCCSCEEEEEE-------ETTEEE-EEETT
T ss_pred cEeEEecCCCCceEEEEE--CCCEEEEE-eCCCeEEEEECCCCCEEEEEcCCcccEEEEEE-------eCCEEE-EEeCC
Confidence 433333322233444454 56666655 457789998986443322222 344456666 555544 44466
Q ss_pred CEEEEEEecCCCCcceEEEEe
Q psy5806 1248 MSVVIAREKSDTGQWDVHLIR 1268 (1332)
Q Consensus 1248 ~~V~~~~~~~g~~~~~~~~~~ 1268 (1332)
+.|...+..++ .....+.
T Consensus 339 g~i~vwd~~~~---~~~~~~~ 356 (445)
T 2ovr_B 339 STVKIWDIKTG---QCLQTLQ 356 (445)
T ss_dssp SCEEEEETTTC---CEEEEEC
T ss_pred CeEEEEECCCC---cEEEEEc
Confidence 78888887766 4444443
No 319
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=95.11 E-value=0.0062 Score=59.98 Aligned_cols=39 Identities=26% Similarity=0.727 Sum_probs=34.9
Q ss_pred ccCC--CCcceeeeccCCCceEEeCCCCceecCCCCCcCCC
Q psy5806 394 SHCA--PKVCSHICLPNKHRFTCQCPLGLTLSPDNKSCSES 432 (1332)
Q Consensus 394 n~C~--~g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~~~ 432 (1332)
++|. +++|.|.|++.+++|+|.|+.||+|..||++|...
T Consensus 82 d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~ 122 (134)
T 2vh0_B 82 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPT 122 (134)
T ss_dssp CGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEES
T ss_pred CccccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccCcC
Confidence 7787 47899999999999999999999999999999643
No 320
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.11 E-value=2.9 Score=48.07 Aligned_cols=197 Identities=14% Similarity=0.077 Sum_probs=118.9
Q ss_pred eEEEEEeCCCcEEEEEeC-CCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEee-CCceEE
Q psy5806 1047 SIFFDYHYSKNLIYFADM-RSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARS-DGQHKK 1124 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~-~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~l-dG~~~~ 1124 (1332)
+..++|+|+++.|..+.. ..+.|+..++.++.....+ ...+.+.+|++.+.++.|..+. . +.+.+++. +|....
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~--~~~~~V~~v~fspdg~~l~s~s-~-~~~~~~~~~~~~~~~ 211 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI--ETRGEVKDLHFSTDGKVVAYIT-G-SSLEVISTVTGSCIA 211 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE--ECSSCCCEEEECTTSSEEEEEC-S-SCEEEEETTTCCEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe--CCCCceEEEEEccCCceEEecc-c-eeEEEEEeccCccee
Confidence 467889999888877654 4578888887754433332 2345688999998777776554 2 34545544 465443
Q ss_pred EE--ecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEE----EecCCCCcceEEEecCCCEEEEEE
Q psy5806 1125 IL--VNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVL----VEEDLAFPNELAIDFKQRRLFWAD 1198 (1332)
Q Consensus 1125 ~~--~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l----~~~~l~~p~glaiD~~~~~LY~~d 1198 (1332)
.. .......+++++.|....|..+.... .....|...++.......+ +.......+.|++.++++.|..+
T Consensus 212 ~~~~~~~~~~v~~v~fspdg~~l~~~s~d~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasg- 287 (365)
T 4h5i_A 212 RKTDFDKNWSLSKINFIADDTVLIAASLKK---GKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLA- 287 (365)
T ss_dssp EECCCCTTEEEEEEEEEETTEEEEEEEESS---SCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEE-
T ss_pred eeecCCCCCCEEEEEEcCCCCEEEEEecCC---cceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEE-
Confidence 32 11223468899999655555443322 1122455555544333222 22223446778999888777665
Q ss_pred cCCCeEEEEecCCCc-eEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecC
Q psy5806 1199 STNKRIEYCDFFGRS-RKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKS 1257 (1332)
Q Consensus 1199 ~~~~~I~~~d~dG~~-~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~ 1257 (1332)
...+.|...|+.... ...+.. .....+|++ . .++.+..+-...++|...+...
T Consensus 288 s~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~f-----S-pdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 288 SNDNSIALVKLKDLSMSKIFKQAHSFAITEVTI-----S-PDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp ETTSCEEEEETTTTEEEEEETTSSSSCEEEEEE-----C-TTSCEEEEEETTSEEEEEECCT
T ss_pred cCCCEEEEEECCCCcEEEEecCcccCCEEEEEE-----C-CCCCEEEEEeCCCeEEEEEcCC
Confidence 456789888886433 222322 455678888 2 2455566777889998888743
No 321
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=95.09 E-value=0.0088 Score=59.53 Aligned_cols=39 Identities=36% Similarity=0.778 Sum_probs=34.9
Q ss_pred ccCCCCCCccccccCCC-CccccCCCCeeEccCCcccccc
Q psy5806 972 CGSNNGGCSHLCLRNPT-NFTCACPTGILLSADRRSCFSR 1010 (1332)
Q Consensus 972 C~~~nGgCshlCl~~p~-~~~C~Cp~g~~l~~d~~tC~~~ 1010 (1332)
|...||+|+|.|..+++ +|+|.|+.||.|..|+++|...
T Consensus 91 c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~ 130 (142)
T 2c4f_L 91 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPT 130 (142)
T ss_dssp TTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEEES
T ss_pred ccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCCCC
Confidence 55568999999999999 9999999999999999999743
No 322
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=95.08 E-value=0.14 Score=61.86 Aligned_cols=112 Identities=12% Similarity=0.131 Sum_probs=78.2
Q ss_pred CCCCCCccEEEeccCCeEEEEeCC---------------------CCeEEEEeCCCCC------c-EE-EEe--------
Q psy5806 507 HNTKKPAGVAIDWRTNKLYWTESE---------------------YNWIEVSNLDGTY------P-TL-LFW-------- 549 (1332)
Q Consensus 507 ~~~~~p~glAvDw~~~~lYw~d~~---------------------~~~I~v~~l~g~~------~-~~-l~~-------- 549 (1332)
+.+.+|+++++++.++.||++-+. .++|.....++.. . .+ |+.
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 345689999999999999998432 2678887765421 1 22 221
Q ss_pred ------------CCCCCceEEEEecCCCeEEE-EecCC----------CCceEEEcCCCCceEEEEe-CCCCCceeeEEe
Q psy5806 550 ------------QNLSEPRDIAVNPIGGIMYW-CSWGD----------LHKIEMAGMDGSHRHILAS-DSLKNPTGLAID 605 (1332)
Q Consensus 550 ------------~~~~~P~~iavdp~~G~lyw-td~g~----------~~~I~r~~~dG~~~~~l~~-~~l~~p~glaiD 605 (1332)
..+..|..|++|+. |.||+ ||.+. +..+.+...+....+.++. .....|+||++.
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~fd~~-G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafS 539 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFS 539 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEEC
T ss_pred ccccCccCccccCccCCCCceEECCC-CCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEEC
Confidence 12688999999996 99999 88531 2368888775333334443 345689999999
Q ss_pred ccCCeEEEEeCCCC
Q psy5806 606 LENSRLYWANVGLK 619 (1332)
Q Consensus 606 ~~~~rLYw~d~~~~ 619 (1332)
+..++||++-...+
T Consensus 540 PD~ktLfV~vQHPG 553 (592)
T 4a9v_A 540 PDQKTLFVGIQHPG 553 (592)
T ss_dssp TTSSEEEEEEESTT
T ss_pred CCCCEEEEEEeCCC
Confidence 99999999865443
No 323
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.98 E-value=7.8 Score=45.59 Aligned_cols=229 Identities=10% Similarity=0.005 Sum_probs=129.9
Q ss_pred cccccCcceEEEEeecceEEEEeCCCCCCCCcccccCC-ccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEe
Q psy5806 1006 SCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLPFPE-YMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIP 1084 (1332)
Q Consensus 1006 tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~-~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~ 1084 (1332)
+|......+|+....+..|+..++.... .+..+.+ ...+.+++|.+.+ ++++-...+.|...++.++..... +
T Consensus 126 ~~~~~~~~~l~sgs~dg~i~vwd~~~~~---~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~~~~~-~ 199 (464)
T 3v7d_B 126 TCLQFEDNYVITGADDKMIRVYDSINKK---FLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGCCTHV-F 199 (464)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTTTEEEEE-E
T ss_pred EEEEECCCEEEEEcCCCcEEEEECCCCc---EEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCcEEEE-E
Confidence 3443333455555444337766665332 2222222 2346788897765 444545788999999875433322 2
Q ss_pred ecCCCCceeeEEEec-CCeEEEEcCCCceEEEEeeCCceEE------------------------EEecCCCCceEEEEc
Q psy5806 1085 LMNDTIRDNFVIDWV-ANNIYYIDSQMHTINVARSDGQHKK------------------------ILVNDLMEPLAIAVY 1139 (1332)
Q Consensus 1085 ~~~~~~p~glAvDw~-~~~LY~td~~~~~I~v~~ldG~~~~------------------------~~~~~~~~P~~iavd 1139 (1332)
.........+++.+. .+++.++-...+.|.++++...... .+........ ++.
T Consensus 200 ~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~ 277 (464)
T 3v7d_B 200 EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVR--TVS 277 (464)
T ss_dssp CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEE--EEE
T ss_pred CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEE--EEc
Confidence 223446677888753 4455566666778999998743211 1111112223 344
Q ss_pred CCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCce-EEEE
Q psy5806 1140 PRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSR-KIVI 1218 (1332)
Q Consensus 1140 p~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~-~~~~ 1218 (1332)
+...+|+..... +.|...++........+...-.....++++++++.|+.+ ...+.|...|+..... ..+.
T Consensus 278 ~~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg-~~dg~i~vwd~~~~~~~~~~~ 349 (464)
T 3v7d_B 278 GHGNIVVSGSYD-------NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISA-SMDTTIRIWDLENGELMYTLQ 349 (464)
T ss_dssp EETTEEEEEETT-------SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEE-ETTSCEEEEETTTTEEEEEEC
T ss_pred CCCCEEEEEeCC-------CeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEE-eCCCcEEEEECCCCcEEEEEe
Confidence 544455555432 467777776544444443334556788999888877765 4667899999864332 2222
Q ss_pred e-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1219 S-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1219 ~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
. ......+++ .+.+|+ +-...+.|...+..++
T Consensus 350 ~h~~~v~~~~~-------~~~~l~-s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 350 GHTALVGLLRL-------SDKFLV-SAAADGSIRGWDANDY 382 (464)
T ss_dssp CCSSCEEEEEE-------CSSEEE-EEETTSEEEEEETTTC
T ss_pred CCCCcEEEEEE-------cCCEEE-EEeCCCcEEEEECCCC
Confidence 2 444566777 455544 4446788888887765
No 324
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=94.96 E-value=0.023 Score=48.92 Aligned_cols=24 Identities=21% Similarity=0.670 Sum_probs=19.4
Q ss_pred ccccCC--CCcce--eeeccCCCceEEe
Q psy5806 392 YQSHCA--PKVCS--HICLPNKHRFTCQ 415 (1332)
Q Consensus 392 ~~n~C~--~g~Cs--hlCl~~~~~~~C~ 415 (1332)
++|+|. ...|. +.|+|.+++|+|.
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~ 29 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCL 29 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEE
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEec
Confidence 468887 35684 6899999999999
No 325
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.95 E-value=2.9 Score=48.14 Aligned_cols=198 Identities=11% Similarity=0.002 Sum_probs=119.5
Q ss_pred eEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEee----cCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-C-
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPL----MNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-G- 1120 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~----~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G- 1120 (1332)
+..+.|.+.++..+++-...+.|...++..+.....+.. ........+++....++++++-...+.|.++++. +
T Consensus 160 v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~ 239 (380)
T 3iz6_a 160 ASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS 239 (380)
T ss_dssp CCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC
T ss_pred eEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC
Confidence 445666766555455556778888888775443332211 1122455677766677888887778899999986 2
Q ss_pred ceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecC-------CCCcceEEEecCCCE
Q psy5806 1121 QHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEED-------LAFPNELAIDFKQRR 1193 (1332)
Q Consensus 1121 ~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~-------l~~p~glaiD~~~~~ 1193 (1332)
.....+..-......|+++|. |.++.+-... +.|..-++........+... ......+++.++++.
T Consensus 240 ~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 312 (380)
T 3iz6_a 240 RAVRTYHGHEGDINSVKFFPD-GQRFGTGSDD------GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRL 312 (380)
T ss_dssp CCCEEECCCSSCCCEEEECTT-SSEEEEECSS------SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSE
T ss_pred cceEEECCcCCCeEEEEEecC-CCeEEEEcCC------CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCE
Confidence 333444433456789999994 5555554433 56777777654443333211 123567899987776
Q ss_pred EEEEEcCCCeEEEEecCCCceE-EEEe-----ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1194 LFWADSTNKRIEYCDFFGRSRK-IVIS-----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1194 LY~~d~~~~~I~~~d~dG~~~~-~~~~-----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
|+-. ...+.|...|....... .+.. ......|++ .+ ++.+..+-...+.|...+..+.
T Consensus 313 l~~g-~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~-----s~-dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 313 LFAG-YSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGL-----SS-DGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp EEEE-CTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEE-----CS-SSSEEEEECTTSCEEEEECCSS
T ss_pred EEEE-ECCCCEEEEECCCCceEEEEecccCCCCCceEEEEE-----CC-CCCEEEEeeCCCCEEEEecCCC
Confidence 6654 56788999888544332 2211 334567787 22 3444556566778877776543
No 326
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=94.95 E-value=0.0071 Score=59.54 Aligned_cols=41 Identities=24% Similarity=0.819 Sum_probs=37.5
Q ss_pred CcccCCCCCCccccccCCCCccccCCCCeeEccCCcccccc
Q psy5806 970 NACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSR 1010 (1332)
Q Consensus 970 n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~ 1010 (1332)
++|..++++|.+.|..++++|+|.|+.||.|..|+++|...
T Consensus 82 d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~ 122 (134)
T 2vh0_B 82 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPT 122 (134)
T ss_dssp CGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEES
T ss_pred CccccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccCcC
Confidence 78988889999999999999999999999999999999743
No 327
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=94.94 E-value=1.7 Score=50.90 Aligned_cols=200 Identities=14% Similarity=0.084 Sum_probs=116.9
Q ss_pred CCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCC----------ceeEeecCC------------CCceeeEEEec
Q psy5806 1042 PEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTR----------IKPIPLMND------------TIRDNFVIDWV 1099 (1332)
Q Consensus 1042 ~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~----------~~~i~~~~~------------~~p~glAvDw~ 1099 (1332)
+....+..++|++.++.|.... ..+.|...++..+.. ....+.... ..+..|++.+.
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGD-KGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEE-TTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECCCCCEEEEEc-CCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 3445678999999888776665 678888888774431 111111121 44677888866
Q ss_pred CC-eEEEEcCCCceEEEEeeCCceEE----------------------------------------EE-ecCCCCceEEE
Q psy5806 1100 AN-NIYYIDSQMHTINVARSDGQHKK----------------------------------------IL-VNDLMEPLAIA 1137 (1332)
Q Consensus 1100 ~~-~LY~td~~~~~I~v~~ldG~~~~----------------------------------------~~-~~~~~~P~~ia 1137 (1332)
++ .++++-...+.|.++++...... .+ ..-......|+
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 52 34455556778888888642211 11 12234578899
Q ss_pred EcCCCcEEEEEecCCCCCCCCCcEEEEecC-CCceEEEE-------ecCCCCcceEEEecCCCEEEEEEcCCCeEEEEec
Q psy5806 1138 VYPRRGLLFYSHWGLYDNSPTTKIEKVYLD-GSYRTVLV-------EEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDF 1209 (1332)
Q Consensus 1138 vdp~~g~Lywtd~~~~~~~~~~~I~r~~ld-G~~~~~l~-------~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~ 1209 (1332)
++|. |.++.+- .. +.|..-++. +.....++ ...-.....+++++++..++.+-...+.|...|+
T Consensus 185 ~~~~-~~~l~s~-~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 185 INSD-YETYLSA-DD------LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp ECTT-SSEEEEE-CS------SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred EcCC-CCEEEEe-CC------CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 9995 4444554 23 567777776 32222222 1112346788999887344444456788999998
Q ss_pred CCCce-----EEEEe-ec------------ccceEEEecCCccccccEEEEEECCCCEEEEEEecC
Q psy5806 1210 FGRSR-----KIVIS-KV------------APYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKS 1257 (1332)
Q Consensus 1210 dG~~~-----~~~~~-~~------------~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~ 1257 (1332)
..... ..+.. .. ...+|++ .+.+.+|.... . +.|...+..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----s~~g~~l~~~~-~-~~v~iwd~~~ 315 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKF-----SHSGRYMMTRD-Y-LSVKVWDLNM 315 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEE-----CTTSSEEEEEE-S-SEEEEEETTC
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEE-----CCCCCEEEEee-C-CeEEEEeCCC
Confidence 65432 33322 21 5677888 33445555544 4 8898888765
No 328
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=94.93 E-value=0.0069 Score=63.35 Aligned_cols=41 Identities=24% Similarity=0.819 Sum_probs=37.9
Q ss_pred CcccCCCCCCccccccCCCCccccCCCCeeEccCCcccccc
Q psy5806 970 NACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSR 1010 (1332)
Q Consensus 970 n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~ 1010 (1332)
++|..++++|.|.|..++++|+|.|+.||.|..|+++|...
T Consensus 82 deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~ 122 (195)
T 1nfu_B 82 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPT 122 (195)
T ss_dssp CGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEES
T ss_pred ccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCccccC
Confidence 78998889999999999999999999999999999999854
No 329
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.87 E-value=0.16 Score=58.47 Aligned_cols=196 Identities=10% Similarity=-0.019 Sum_probs=108.7
Q ss_pred eEEEEEeCCCcEEEEEeCCCCeEEEEECCCCC-CceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCce---
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSGNLRTFDMSDST-RIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQH--- 1122 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~-~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~--- 1122 (1332)
+..++|++.++.|.... ..+.|+..++.++. .....+.........|++.+.++.|+.+. ..+.|.++++....
T Consensus 14 v~~~~~s~~g~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~d~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTT-ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS-QDRNAYVYEKRPDGTWK 91 (377)
T ss_dssp CSCCEECSSSSEEECCC-SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEE-TTSSEEEC------CCC
T ss_pred EEEEEECCCCCEEEEec-CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEe-CCCeEEEEEcCCCCcee
Confidence 45678888777665443 56777777765331 11112222334678899987766665544 45689999987543
Q ss_pred -EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCce---EEEEec-CCCCcceEEEecCCCEEEEE
Q psy5806 1123 -KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYR---TVLVEE-DLAFPNELAIDFKQRRLFWA 1197 (1332)
Q Consensus 1123 -~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~---~~l~~~-~l~~p~glaiD~~~~~LY~~ 1197 (1332)
...+.........++++|...+|+..... +.|...+++.... ...+.. .-.....|++.++++.|..+
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGA-------RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEESS-------SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEecC-------CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 22233344567899999965556555432 4566666665541 222322 23557788999877777665
Q ss_pred EcCCCeEEEEecCCCc----------------eEEEE--e-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1198 DSTNKRIEYCDFFGRS----------------RKIVI--S-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1198 d~~~~~I~~~d~dG~~----------------~~~~~--~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
. ..+.|...|+.... .+.+. . .....++++ .+.+.+|+.. ...+.|...+..++
T Consensus 165 ~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----sp~~~~l~~~-~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 165 C-ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGF-----SPSGNALAYA-GHDSSVTIAYPSAP 237 (377)
T ss_dssp E-SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEE-----CTTSSCEEEE-ETTTEEC-CEECST
T ss_pred e-CCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEE-----CCCCCEEEEE-eCCCcEEEEECCCC
Confidence 4 55778888874111 11221 1 334567777 2334444444 46788888888777
No 330
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.86 E-value=6.6 Score=44.25 Aligned_cols=195 Identities=9% Similarity=0.011 Sum_probs=119.4
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCce---
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQH--- 1122 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~--- 1122 (1332)
.+.+++|++.++.|+-+ ...+.|+..++.++.....+. ........+++.+.++.|... ...+.|.++++....
T Consensus 57 ~v~~~~~s~d~~~l~s~-s~Dg~v~iWd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~-~~d~~v~iw~~~~~~~~~ 133 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSA-SQDGKLIIWDSYTTNKVHAIP-LRSSWVMTCAYAPSGNYVACG-GLDNICSIYNLKTREGNV 133 (340)
T ss_dssp CEEEEEECTTSSEEEEE-ETTTEEEEEETTTCCEEEEEE-CSSSCEEEEEECTTSSEEEEE-ETTCEEEEEETTTCSBSC
T ss_pred ceEEEEECCCCCEEEEE-eCCCcEEEEECCCCCcceEee-cCCccEEEEEECCCCCEEEEE-eCCCeEEEEECccCCCcc
Confidence 46789999887766554 477889999877544333332 334456788898777666544 446788899986421
Q ss_pred --EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcC
Q psy5806 1123 --KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADST 1200 (1332)
Q Consensus 1123 --~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~ 1200 (1332)
...+..-......+++.+ .+.|+-+.. . ..|..-++........+...-.....+++.++++.| .+-..
T Consensus 134 ~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~-d------~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~sg~~ 204 (340)
T 1got_B 134 RVSRELAGHTGYLSCCRFLD-DNQIVTSSG-D------TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF-VSGAC 204 (340)
T ss_dssp EEEEEEECCSSCEEEEEEEE-TTEEEEEET-T------SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE-EEEET
T ss_pred eeEEEecCCCccEEEEEECC-CCcEEEEEC-C------CcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEE-EEEeC
Confidence 122333334566777776 455544432 2 457666775544444443333456788888766544 45556
Q ss_pred CCeEEEEecCCCce-EEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1201 NKRIEYCDFFGRSR-KIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1201 ~~~I~~~d~dG~~~-~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.+.|...|+..... ..+.. .....+|++ .+ ++.++.+-...+.|...+..++
T Consensus 205 d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~-----~p-~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 205 DASAKLWDVREGMCRQTFTGHESDINAICF-----FP-NGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp TSCEEEEETTTCSEEEEECCCSSCEEEEEE-----CT-TSSEEEEEETTSCEEEEETTTT
T ss_pred CCcEEEEECCCCeeEEEEcCCcCCEEEEEE-----cC-CCCEEEEEcCCCcEEEEECCCC
Confidence 78899888864433 33322 455677888 22 3444555567788888887766
No 331
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.84 E-value=2.6 Score=48.55 Aligned_cols=160 Identities=9% Similarity=0.000 Sum_probs=100.1
Q ss_pred cceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCC-ceE
Q psy5806 1045 MSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDG-QHK 1123 (1332)
Q Consensus 1045 ~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG-~~~ 1123 (1332)
..+..+++.+.++.++.+-...+.|+..++.........+....+.+..+++.+.++.| ++-...+.|.++++.. ...
T Consensus 206 ~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l-~s~s~D~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 206 ADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRF-GTGSDDGTCRLFDMRTGHQL 284 (380)
T ss_dssp SCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEE-EEECSSSCEEEEETTTTEEE
T ss_pred cCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeE-EEEcCCCeEEEEECCCCcEE
Confidence 34678888886666777777889999999863322222232334467889998765555 5666778999999974 433
Q ss_pred EEEecC-------CCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEE----ecCCCCcceEEEecCCC
Q psy5806 1124 KILVND-------LMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLV----EEDLAFPNELAIDFKQR 1192 (1332)
Q Consensus 1124 ~~~~~~-------~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~----~~~l~~p~glaiD~~~~ 1192 (1332)
.++... ......++++|...+| ++-... +.|..-++........+ ...-.....|++.++++
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~g~~d------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~ 357 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLL-FAGYSN------GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGS 357 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEE-EEECTT------SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSS
T ss_pred EEecccccccccccCceEEEEECCCCCEE-EEEECC------CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCC
Confidence 333221 1235789999955555 443332 46777776544433222 11223467899998877
Q ss_pred EEEEEEcCCCeEEEEecCCCc
Q psy5806 1193 RLFWADSTNKRIEYCDFFGRS 1213 (1332)
Q Consensus 1193 ~LY~~d~~~~~I~~~d~dG~~ 1213 (1332)
.|. +-+..+.|..-++.|..
T Consensus 358 ~l~-sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 358 ALC-TGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEE-EECTTSCEEEEECCSSS
T ss_pred EEE-EeeCCCCEEEEecCCCc
Confidence 665 44567788888887653
No 332
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=94.76 E-value=3.5 Score=48.22 Aligned_cols=208 Identities=10% Similarity=-0.038 Sum_probs=118.2
Q ss_pred ceEEEEEeC-CCcEEEEEeCCCCeEEEEECCC---CCCce-eEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEee--
Q psy5806 1046 SSIFFDYHY-SKNLIYFADMRSGNLRTFDMSD---STRIK-PIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARS-- 1118 (1332)
Q Consensus 1046 ~~~~id~d~-~~~~lY~sd~~~~~I~~~~l~~---g~~~~-~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~l-- 1118 (1332)
.+.+++|++ .++ ++++-...+.|+..++.. +.... .........+..|++.+.++.|+ +-...+.|.++++
T Consensus 65 ~V~~~~~s~~~~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~dg~i~vwd~~~ 142 (437)
T 3gre_A 65 SITSSAVSPGETP-YLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFA-VSSKDGQIIVLKVNH 142 (437)
T ss_dssp CEEEEEEECSSSC-EEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEE-EEETTSEEEEEEEEE
T ss_pred ceEEEEECCCCCC-EEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEE-EEeCCCEEEEEEecc
Confidence 467899999 555 445545788898888763 22111 22212345678899987555565 4445678999988
Q ss_pred --CCceEEEEec------------CCCCceEEE--EcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEec--CCC
Q psy5806 1119 --DGQHKKILVN------------DLMEPLAIA--VYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEE--DLA 1180 (1332)
Q Consensus 1119 --dG~~~~~~~~------------~~~~P~~ia--vdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~--~l~ 1180 (1332)
.|+....... .......++ ..| .+.++++-... +.|...++........+.. .-.
T Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~h~~ 215 (437)
T 3gre_A 143 YQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNL------SRVIIFDIRTLERLQIIENSPRHG 215 (437)
T ss_dssp EEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETT------SEEEEEETTTCCEEEEEECCGGGC
T ss_pred ccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCC------CeEEEEeCCCCeeeEEEccCCCCC
Confidence 3443332110 112233333 334 34444443332 5688888865554444443 235
Q ss_pred CcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEE--e-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecC
Q psy5806 1181 FPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVI--S-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKS 1257 (1332)
Q Consensus 1181 ~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~--~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~ 1257 (1332)
....|+++++++.|+.+ ...+.|...|+......... . .....+|++ ++.-..++.+.++-...+.|...+..+
T Consensus 216 ~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~--~~~~s~~~~~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 216 AVSSICIDEECCVLILG-TTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEV--CQFYGKNSVIVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp CEEEEEECTTSCEEEEE-ETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEE--CTTTCTTEEEEEEESTTEEEEEEETTT
T ss_pred ceEEEEECCCCCEEEEE-cCCCeEEEEEcCCccEEEEEecCCCCceEEEEe--ccccCCCccEEEEEcCCCcEEEEEcCC
Confidence 67889999887777665 45678999888643322222 1 223345544 111112355666666778888888877
Q ss_pred CCCcceEEEEe
Q psy5806 1258 DTGQWDVHLIR 1268 (1332)
Q Consensus 1258 g~~~~~~~~~~ 1268 (1332)
+ .....+.
T Consensus 293 ~---~~~~~~~ 300 (437)
T 3gre_A 293 G---HCQYAFI 300 (437)
T ss_dssp T---EEEEEEE
T ss_pred C---cEEEEEE
Confidence 7 5444444
No 333
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.71 E-value=3.3 Score=47.01 Aligned_cols=194 Identities=11% Similarity=-0.005 Sum_probs=113.4
Q ss_pred eEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCcee-Ee-ecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceE-
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKP-IP-LMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHK- 1123 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~-i~-~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~- 1123 (1332)
+..++|++.++.|.-.. ..+.|+..++..+..... .. .........|++.+.++.|..+ ...+.|.+.+++....
T Consensus 19 v~~l~~sp~g~~las~~-~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~-s~D~~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCG-GDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASA-SFDATTCIWKKNQDDFE 96 (345)
T ss_dssp EEEEEECTTSSCEEEEE-TTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEE-ETTSCEEEEEECCC-EE
T ss_pred EEEEEECCCCCEEEEEc-CCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEE-ECCCcEEEEEccCCCeE
Confidence 57899999887665554 677888777663322211 12 1223457889998877766544 4456788898875432
Q ss_pred --EEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEE---EEecCCCCcceEEEecCCCEEEEEE
Q psy5806 1124 --KILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTV---LVEEDLAFPNELAIDFKQRRLFWAD 1198 (1332)
Q Consensus 1124 --~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~---l~~~~l~~p~glaiD~~~~~LY~~d 1198 (1332)
..+..-......|+++|...+| .+-... ..|..-+++...... .+.........+++.++++.|.-+
T Consensus 97 ~~~~~~~h~~~v~~v~~sp~~~~l-~s~s~D------~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~- 168 (345)
T 3fm0_A 97 CVTTLEGHENEVKSVAWAPSGNLL-ATCSRD------KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA- 168 (345)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEE-EEEETT------SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEE-
T ss_pred EEEEccCCCCCceEEEEeCCCCEE-EEEECC------CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEE-
Confidence 2243334567899999955444 443332 346666665433221 222223446678888877766655
Q ss_pred cCCCeEEEEecCCCceEEEEe----ecccceEEEecCCccccccEEEEEECCCCEEEEEEec
Q psy5806 1199 STNKRIEYCDFFGRSRKIVIS----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREK 1256 (1332)
Q Consensus 1199 ~~~~~I~~~d~dG~~~~~~~~----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~ 1256 (1332)
...+.|...+........+.. .....+|++ ++.+.+ ..+-...+.|...+..
T Consensus 169 s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~-----sp~g~~-l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 169 SYDDTVKLYREEEDDWVCCATLEGHESTVWSLAF-----DPSGQR-LASCSDDRTVRIWRQY 224 (345)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE-----CTTSSE-EEEEETTSCEEEEEEE
T ss_pred eCCCcEEEEEecCCCEEEEEEecCCCCceEEEEE-----CCCCCE-EEEEeCCCeEEEeccc
Confidence 456778887776543322222 445677888 223444 4454566777777653
No 334
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.69 E-value=0.62 Score=53.48 Aligned_cols=173 Identities=10% Similarity=-0.032 Sum_probs=97.1
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCC-C-ceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCce-
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDST-R-IKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQH- 1122 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~-~-~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~- 1122 (1332)
.+..++|++.++.|+... ..+.|+..++..+. . ...........+..+++.+.++.|+.+. ..+.|.+++++...
T Consensus 57 ~v~~~~~s~~~~~l~s~s-~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~ 134 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCS-QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGS-GARVISVCYFEQEND 134 (377)
T ss_dssp CEEEEEECTTTCCEEEEE-TTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEE-SSSCEEECCC-----
T ss_pred eEEEEEEeCCCCEEEEEe-CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEe-cCCeEEEEEECCccc
Confidence 467999999887666655 67788888877443 1 1112222344677888887677776554 45688888887543
Q ss_pred ---EEEEec-CCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCc---------------eEEEEe--cCCCC
Q psy5806 1123 ---KKILVN-DLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSY---------------RTVLVE--EDLAF 1181 (1332)
Q Consensus 1123 ---~~~~~~-~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~---------------~~~l~~--~~l~~ 1181 (1332)
...+.. -......|+++|...+|+..... +.|...++.... ...++. ..-..
T Consensus 135 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (377)
T 3dwl_C 135 WWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD-------RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGW 207 (377)
T ss_dssp CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS-------SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSS
T ss_pred ceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC-------CEEEEEEEEecccCCCccccccccccchhhhhhcccCCce
Confidence 333443 34568899999965555544332 345555553111 011111 12234
Q ss_pred cceEEEecCCCEEEEEEcCCCeEEEEecCCCce-----EEEEe-ecccceEEE
Q psy5806 1182 PNELAIDFKQRRLFWADSTNKRIEYCDFFGRSR-----KIVIS-KVAPYGLSV 1228 (1332)
Q Consensus 1182 p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~-----~~~~~-~~~P~glav 1228 (1332)
...++++++++.|+.+. ..+.|...|+..... ..+.. .....+|++
T Consensus 208 v~~~~~sp~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 259 (377)
T 3dwl_C 208 VHAVGFSPSGNALAYAG-HDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLW 259 (377)
T ss_dssp EEEEEECTTSSCEEEEE-TTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEE
T ss_pred EEEEEECCCCCEEEEEe-CCCcEEEEECCCCCCcceeeEeecCCCCceEEEEE
Confidence 67889998888777664 567888888875433 11211 344567777
No 335
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.67 E-value=3.2 Score=52.31 Aligned_cols=77 Identities=5% Similarity=-0.050 Sum_probs=47.1
Q ss_pred ceEEEecCCCEEEEEEcC------------------------------------------CCeEEEEecCCCceEEEEe-
Q psy5806 1183 NELAIDFKQRRLFWADST------------------------------------------NKRIEYCDFFGRSRKIVIS- 1219 (1332)
Q Consensus 1183 ~glaiD~~~~~LY~~d~~------------------------------------------~~~I~~~d~dG~~~~~~~~- 1219 (1332)
.++++|+++++||+.... .+.|..+|+......--+.
T Consensus 396 ~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~ 475 (677)
T 1kb0_A 396 HPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH 475 (677)
T ss_dssp SCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC
Confidence 368999999999986431 1668888885332211122
Q ss_pred ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEe
Q psy5806 1220 KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIR 1268 (1332)
Q Consensus 1220 ~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~ 1268 (1332)
...+.+.++ ...++.+|+. ...+.|+.+|..+| +.+..+.
T Consensus 476 ~~~~~~g~~-----~~~g~~v~~g-~~dg~l~a~D~~tG---~~lw~~~ 515 (677)
T 1kb0_A 476 VSPWNGGTL-----TTAGNVVFQG-TADGRLVAYHAATG---EKLWEAP 515 (677)
T ss_dssp SSSCCCCEE-----EETTTEEEEE-CTTSEEEEEETTTC---CEEEEEE
T ss_pred CCCCcCcce-----EeCCCEEEEE-CCCCcEEEEECCCC---ceeeeee
Confidence 222233222 1267788887 46788888888888 5554443
No 336
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=94.63 E-value=6.1 Score=44.57 Aligned_cols=196 Identities=10% Similarity=0.015 Sum_probs=111.0
Q ss_pred eEEEEE-----eCCCcEEEEEeCCCCeEEEEECCCCCC-----c-eeEeecCCCCceeeEEEecCCeEEEEcCCCceEEE
Q psy5806 1047 SIFFDY-----HYSKNLIYFADMRSGNLRTFDMSDSTR-----I-KPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINV 1115 (1332)
Q Consensus 1047 ~~~id~-----d~~~~~lY~sd~~~~~I~~~~l~~g~~-----~-~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v 1115 (1332)
+..++| .+.++.+.++-...+.|+..++..+.. . ...+.........+++.+.+..| ++-...+.|.+
T Consensus 24 V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l-~s~s~D~~v~l 102 (343)
T 2xzm_R 24 VTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA-ISSSWDKTLRL 102 (343)
T ss_dssp EEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE-EEEETTSEEEE
T ss_pred hhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE-EEEcCCCcEEE
Confidence 456777 443455556666778888877653221 1 11121223356788998766555 45556779999
Q ss_pred EeeC-CceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEe--cCCCCcceEEEecCCC
Q psy5806 1116 ARSD-GQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVE--EDLAFPNELAIDFKQR 1192 (1332)
Q Consensus 1116 ~~ld-G~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~--~~l~~p~glaiD~~~~ 1192 (1332)
+++. |+....+..-......|+++|...+|+-+.. . ..|..-++.+.....+.. ........+++.+...
T Consensus 103 wd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~-d------~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 175 (343)
T 2xzm_R 103 WDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA-E------REIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMK 175 (343)
T ss_dssp EETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEET-T------SCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCC
T ss_pred EECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC-C------CEEEEEeccCCceeeeecccCCCceeeeeeeccccc
Confidence 9987 5544445444456889999996666654432 2 456666766543322211 1112344566655431
Q ss_pred ---------EEEEEEcCCCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEec
Q psy5806 1193 ---------RLFWADSTNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREK 1256 (1332)
Q Consensus 1193 ---------~LY~~d~~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~ 1256 (1332)
.++.+-...+.|...|..+.....+.. .....+|++ .+ ++.+..+-...+.|...+..
T Consensus 176 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~-----s~-~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 176 SANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSI-----SP-NGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp SCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEE-----CT-TSSEEEEEETTCEEEEEESS
T ss_pred cccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEE-----CC-CCCEEEEEcCCCeEEEEECC
Confidence 344455567788887755433333332 445567777 22 33344455567788877763
No 337
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.59 E-value=2.1 Score=54.04 Aligned_cols=194 Identities=12% Similarity=0.030 Sum_probs=115.8
Q ss_pred eEEEEEeCCCcEEEEEeCCC----CeEEEEECCCCCCc-eeEeecCCCCceeeEEEecCCeEEEEcCC------------
Q psy5806 1047 SIFFDYHYSKNLIYFADMRS----GNLRTFDMSDSTRI-KPIPLMNDTIRDNFVIDWVANNIYYIDSQ------------ 1109 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~----~~I~~~~l~~g~~~-~~i~~~~~~~p~glAvDw~~~~LY~td~~------------ 1109 (1332)
..++++++.+++|.|+.... ..|+.+++.+|... ...+ ... ...+++..+.++.||++...
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~-~~~-~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~ 200 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI-EGG-KYATPKWTPDSKGFYYEWLPTDPSIKVDERPG 200 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCB-SCC-TTCCCEECTTSSEEEEEECCCCTTSCGGGGGG
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCccc-Ccc-cccceEEecCCCEEEEEEecCCCCCccccCCC
Confidence 56888999998887765433 46999998855432 1111 111 12577887788889887653
Q ss_pred CceEEEEeeCCce--EEEEecCC---CCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcce
Q psy5806 1110 MHTINVARSDGQH--KKILVNDL---MEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNE 1184 (1332)
Q Consensus 1110 ~~~I~v~~ldG~~--~~~~~~~~---~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~g 1184 (1332)
...|.+.++.+.. .+.+.... ..-.+++++|...+|+++.... .....|+..+..+...+.|.... .....
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~---~~~~~l~~~~~~~~~~~~l~~~~-~~~~~ 276 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG---WSENDVYWKRPGEKDFRLLVKGV-GAKYE 276 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET---TTEEEEEEECTTCSSCEEEEECS-SCCEE
T ss_pred CCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC---CCceEEEEEcCCCCceEEeecCC-CceEE
Confidence 2348888887443 22333322 2346899999887888775432 02357888877555555554422 22222
Q ss_pred EEEecCCCEEEEEEc---CCCeEEEEecCCCce---EEEEe---ecccceEEEecCCccccccEEEEEECCCC--EEEEE
Q psy5806 1185 LAIDFKQRRLFWADS---TNKRIEYCDFFGRSR---KIVIS---KVAPYGLSVRQSPGKAFIVELYWTDWEAM--SVVIA 1253 (1332)
Q Consensus 1185 laiD~~~~~LY~~d~---~~~~I~~~d~dG~~~---~~~~~---~~~P~glav~~~~~~~~~~~lYwtd~~~~--~V~~~ 1253 (1332)
. +.++++ ||+... ...+|..+++++... +.++. .....++++ .+++|+++-...+ +|..+
T Consensus 277 ~-~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~-------~~~~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 277 V-HAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSI-------VGGHLSLEYLKDATSEVRVA 347 (695)
T ss_dssp E-EEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEE-------ETTEEEEEEEETTEEEEEEE
T ss_pred E-EecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEE-------ECCEEEEEEEECCEEEEEEE
Confidence 2 235666 777644 368899999976542 44543 223456777 6777777765433 44455
Q ss_pred Ee
Q psy5806 1254 RE 1255 (1332)
Q Consensus 1254 ~~ 1255 (1332)
+.
T Consensus 348 ~~ 349 (695)
T 2bkl_A 348 TL 349 (695)
T ss_dssp ET
T ss_pred eC
Confidence 53
No 338
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.57 E-value=7.2 Score=49.03 Aligned_cols=196 Identities=9% Similarity=-0.031 Sum_probs=120.1
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKI 1125 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~ 1125 (1332)
.+..++|++.++.|.-.. ..+.|+..++..+.....+. ........+++.+.++.|. +-...+.|.++++.+.....
T Consensus 432 ~v~~v~~s~~g~~l~sgs-~Dg~v~vwd~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~-s~s~D~~i~iwd~~~~~~~~ 508 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGS-WDGELRLWDLAAGVSTRRFV-GHTKDVLSVAFSLDNRQIV-SASRDRTIKLWNTLGECKYT 508 (694)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEE-EEETTSCEEEECTTSCEEEE
T ss_pred cEEEEEECCCCCEEEEEe-CCCcEEEEECCCCcceeEEe-CCCCCEEEEEEeCCCCEEE-EEeCCCEEEEEECCCCccee
Confidence 467899999887766554 77899999987544333332 3344678899988777775 44456789999988765554
Q ss_pred EecC----CCCceEEEEcCCCc-EEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcC
Q psy5806 1126 LVND----LMEPLAIAVYPRRG-LLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADST 1200 (1332)
Q Consensus 1126 ~~~~----~~~P~~iavdp~~g-~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~ 1200 (1332)
+... ......++++|... .++.+-... +.|..-++........+...-.....++++++++.|.-+ ..
T Consensus 509 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d------~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg-~~ 581 (694)
T 3dm0_A 509 ISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD------KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASG-GK 581 (694)
T ss_dssp ECSSTTSCSSCEEEEEECSCSSSCEEEEEETT------SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE-ET
T ss_pred eccCCCCCCCcEEEEEEeCCCCcceEEEEeCC------CeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEE-eC
Confidence 4221 23467899998542 344443332 457777776655444444334556788999876655544 56
Q ss_pred CCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1201 NKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1201 ~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.+.|...|+.......... .....++++ .+ ++.+..+ ...+.|...+..++
T Consensus 582 Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~-----sp-~~~~l~~-~~~~~i~iwd~~~~ 633 (694)
T 3dm0_A 582 DGVVLLWDLAEGKKLYSLEANSVIHALCF-----SP-NRYWLCA-ATEHGIKIWDLESK 633 (694)
T ss_dssp TSBCEEEETTTTEEEECCBCSSCEEEEEE-----CS-SSSEEEE-EETTEEEEEETTTT
T ss_pred CCeEEEEECCCCceEEEecCCCcEEEEEE-----cC-CCcEEEE-EcCCCEEEEECCCC
Confidence 7788888885433221122 344556777 11 2222222 23456888887766
No 339
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=94.57 E-value=0.0082 Score=57.67 Aligned_cols=42 Identities=21% Similarity=0.450 Sum_probs=35.7
Q ss_pred CCccccccCCC-CcceeeeccCCCceEEeCCCCceecCC-CCCc
Q psy5806 388 RQPNYQSHCAP-KVCSHICLPNKHRFTCQCPLGLTLSPD-NKSC 429 (1332)
Q Consensus 388 ~qp~~~n~C~~-g~CshlCl~~~~~~~C~C~~G~~L~~d-~~tC 429 (1332)
+.+..+++|.. +.|.+.|++.+++|+|.|+.||++..+ +++|
T Consensus 75 ~~C~dideC~~~~~C~~~C~n~~g~y~C~C~~G~~g~~~~g~~C 118 (118)
T 1dx5_I 75 FICTDIDECENGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 118 (118)
T ss_dssp TEEEECCHHHHCSSCSSEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred CccccccccCCCCCCcCeEEeCCCCEEEECCCCCccCCCCCCCC
Confidence 33456788984 889999999999999999999999888 8776
No 340
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.56 E-value=1.3 Score=56.77 Aligned_cols=193 Identities=10% Similarity=0.020 Sum_probs=114.3
Q ss_pred eEEEEEe-CCCcEEEEEeCCCC----eEEEEECCCC-CCceeEeecCCCCceeeEEEecCCeEEEEcCC----CceEEEE
Q psy5806 1047 SIFFDYH-YSKNLIYFADMRSG----NLRTFDMSDS-TRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQ----MHTINVA 1116 (1332)
Q Consensus 1047 ~~~id~d-~~~~~lY~sd~~~~----~I~~~~l~~g-~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~----~~~I~v~ 1116 (1332)
..++.++ +.+++|.|+....| .|+.+++++| ......+. . ...+++..+.++.||++... ...|.+.
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~-~--~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS-G--TNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE-E--ECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc-C--ceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 4567788 88887777654443 4999998855 31111111 1 13466776677788887542 1367778
Q ss_pred eeCCce--EEEEecC--CCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCc--e--EEEEecCCCCcceEEEe
Q psy5806 1117 RSDGQH--KKILVND--LMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSY--R--TVLVEEDLAFPNELAID 1188 (1332)
Q Consensus 1117 ~ldG~~--~~~~~~~--~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~--~--~~l~~~~l~~p~glaiD 1188 (1332)
++.+.. ...+... ...-.+++++|...+|+|+.+.. ....|+.+++++.. . +.++... ..+ -..+|
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~----~~~~l~~~d~~~~~~~~~~~~l~~~~-~~~-~~s~~ 326 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP----ETAEVHLLDLRKGNAHNTLEIVRPRE-KGV-RYDVQ 326 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECS----SCEEEEEEESSSCTTCCCEEESSCCC-TTC-CEEEE
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCC----CCceEEEEECCCCCCCceeEEeecCC-CCc-eEEEe
Confidence 887542 2233221 12235678999888899987543 35689999998752 2 3333221 222 23455
Q ss_pred -cCCCEEEEEEc----CCCeEEEEecCC-CceEE-EEe---ecccceEEEecCCccccccEEEEEECCCC--EEEEEEe
Q psy5806 1189 -FKQRRLFWADS----TNKRIEYCDFFG-RSRKI-VIS---KVAPYGLSVRQSPGKAFIVELYWTDWEAM--SVVIARE 1255 (1332)
Q Consensus 1189 -~~~~~LY~~d~----~~~~I~~~d~dG-~~~~~-~~~---~~~P~glav~~~~~~~~~~~lYwtd~~~~--~V~~~~~ 1255 (1332)
..+++|||... ...+|.++++++ ...+. ++. .....+++. .+++||++-...+ .|+++++
T Consensus 327 ~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~-------~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 327 MHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV-------RSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE-------CSSEEEEEEEETTEEEEEEEEC
T ss_pred eeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE-------ECCEEEEEEEeCCEEEEEEEec
Confidence 45888888743 346899999984 34333 443 223456677 6778877765333 5666664
No 341
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.56 E-value=8.4 Score=44.02 Aligned_cols=173 Identities=9% Similarity=-0.009 Sum_probs=94.8
Q ss_pred CcEEEEEeCCCCeEEEEECCCCCCceeEeecCC-C---------CceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEE
Q psy5806 1056 KNLIYFADMRSGNLRTFDMSDSTRIKPIPLMND-T---------IRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKK 1124 (1332)
Q Consensus 1056 ~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~-~---------~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~ 1124 (1332)
++.||+.. ..+.|+.+++.+|........... + .....+++ ++.||+... .+.+..+++. |+.+-
T Consensus 188 ~~~v~~g~-~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~v~~~~~-~g~l~~~d~~tG~~~w 263 (376)
T 3q7m_A 188 FGAAVVGG-DNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV--NGVVFALAY-NGNLTALDLRSGQIMW 263 (376)
T ss_dssp TTEEEECC-TTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE--TTEEEEECT-TSCEEEEETTTCCEEE
T ss_pred CCEEEEEc-CCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE--CCEEEEEec-CcEEEEEECCCCcEEe
Confidence 35666643 456677777654443322211100 0 01222344 788998764 4578788874 65443
Q ss_pred EEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEe-cCCCCcceEEEecCCCEEEEEEcCCCe
Q psy5806 1125 ILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVE-EDLAFPNELAIDFKQRRLFWADSTNKR 1203 (1332)
Q Consensus 1125 ~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~-~~l~~p~glaiD~~~~~LY~~d~~~~~ 1203 (1332)
.. ....+.+++++ .+.||++... +.|..++.......-... ..-......++. +++||+.+ ..+.
T Consensus 264 ~~--~~~~~~~~~~~--~~~l~~~~~~-------g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~-~~g~ 329 (376)
T 3q7m_A 264 KR--ELGSVNDFIVD--GNRIYLVDQN-------DRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGD-SEGY 329 (376)
T ss_dssp EE--CCCCEEEEEEE--TTEEEEEETT-------CCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEEC-TTSE
T ss_pred ec--cCCCCCCceEE--CCEEEEEcCC-------CeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEe-CCCe
Confidence 22 23445667776 6799998754 368888874333221111 011122234443 68899886 4578
Q ss_pred EEEEecC-CCceEEEEeec--ccceEEEecCCccccccEEEEEECCCCEEEEEE
Q psy5806 1204 IEYCDFF-GRSRKIVISKV--APYGLSVRQSPGKAFIVELYWTDWEAMSVVIAR 1254 (1332)
Q Consensus 1204 I~~~d~d-G~~~~~~~~~~--~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~ 1254 (1332)
|..+|.. |+.+....... .....++ .++.||+... .+.|+.++
T Consensus 330 l~~~d~~tG~~~~~~~~~~~~~~~~~~~-------~~~~l~v~~~-~G~l~~~~ 375 (376)
T 3q7m_A 330 LHWINVEDGRFVAQQKVDSSGFQTEPVA-------ADGKLLIQAK-DGTVYSIT 375 (376)
T ss_dssp EEEEETTTCCEEEEEECCTTCBCSCCEE-------ETTEEEEEBT-TSCEEEEE
T ss_pred EEEEECCCCcEEEEEecCCCcceeCCEE-------ECCEEEEEeC-CCEEEEEe
Confidence 9998875 43322111111 1223456 7889999874 57787776
No 342
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=94.50 E-value=0.007 Score=54.53 Aligned_cols=40 Identities=25% Similarity=0.683 Sum_probs=33.9
Q ss_pred CCcccCCCCCCc-cccccCCCCccccCCCCeeEccCCcccc
Q psy5806 969 PNACGSNNGGCS-HLCLRNPTNFTCACPTGILLSADRRSCF 1008 (1332)
Q Consensus 969 ~n~C~~~nGgCs-hlCl~~p~~~~C~Cp~g~~l~~d~~tC~ 1008 (1332)
.++|..+++.|. +.|..++++|+|.||.||.+..++++|+
T Consensus 46 ideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~~Ci 86 (86)
T 1lmj_A 46 IDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 86 (86)
T ss_dssp CCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCCC
T ss_pred cccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCCCCccC
Confidence 577877666776 6899999999999999999998988885
No 343
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=94.49 E-value=0.015 Score=51.87 Aligned_cols=40 Identities=30% Similarity=0.924 Sum_probs=31.7
Q ss_pred cccccCC-CCccee-eeccCCCceEEeCCCCceecCCCCCcCCC
Q psy5806 391 NYQSHCA-PKVCSH-ICLPNKHRFTCQCPLGLTLSPDNKSCSES 432 (1332)
Q Consensus 391 ~~~n~C~-~g~Csh-lCl~~~~~~~C~C~~G~~L~~d~~tC~~~ 432 (1332)
.+.++|. +..|.| .|++.+++|+|.|+.||++ +++.|...
T Consensus 3 ~dideC~~~~~C~~g~C~n~~g~y~C~C~~Gy~~--~g~~C~di 44 (82)
T 1emn_A 3 VDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECVDT 44 (82)
T ss_dssp CCCCSSSSTTSCSSSEECCCSSCCCEECCTTEEE--ETTEEEEC
T ss_pred CccccCCCCCCcCCCEEEecCCCEEEECCCCeEC--CCCccCCc
Confidence 3467887 467876 8999999999999999997 57778543
No 344
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.48 E-value=6.1 Score=46.28 Aligned_cols=223 Identities=9% Similarity=0.008 Sum_probs=122.2
Q ss_pred cccccCcceEEEEeecceEEEEeCCCCCCCCcccccCC-ccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEe
Q psy5806 1006 SCFSRTREFLLYTSRFGVIRRISLDTADLLPVTLPFPE-YMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIP 1084 (1332)
Q Consensus 1006 tC~~~p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~-~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~ 1084 (1332)
+|......+|+....+..|+..++..... ...+.+ ...+.++++ .++.|+ +-...+.|...++.++.....+.
T Consensus 137 ~~~~~d~~~l~~g~~dg~i~iwd~~~~~~---~~~~~~h~~~v~~l~~--~~~~l~-sg~~dg~i~vwd~~~~~~~~~~~ 210 (435)
T 1p22_A 137 YCLQYDDQKIVSGLRDNTIKIWDKNTLEC---KRILTGHTGSVLCLQY--DERVII-TGSSDSTVRVWDVNTGEMLNTLI 210 (435)
T ss_dssp EEEECCSSEEEEEESSSCEEEEESSSCCE---EEEECCCSSCEEEEEC--CSSEEE-EEETTSCEEEEESSSCCEEEEEC
T ss_pred EEEEECCCEEEEEeCCCeEEEEeCCCCeE---EEEEcCCCCcEEEEEE--CCCEEE-EEcCCCeEEEEECCCCcEEEEEc
Confidence 34433344555554443377666653321 112222 224567777 344444 44478899999987554333322
Q ss_pred ecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCc-eE---EEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCc
Q psy5806 1085 LMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQ-HK---KILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTK 1160 (1332)
Q Consensus 1085 ~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~-~~---~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~ 1160 (1332)
........|+++ ++.| ++-...+.|.++++... .. ..+.........++.+. .+|+.+... +.
T Consensus 211 -~h~~~v~~l~~~--~~~l-~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~s~~~d-------g~ 277 (435)
T 1p22_A 211 -HHCEAVLHLRFN--NGMM-VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGD-------RT 277 (435)
T ss_dssp -CCCSCEEEEECC--TTEE-EEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET--TEEEEEETT-------SE
T ss_pred -CCCCcEEEEEEc--CCEE-EEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCC--CEEEEEeCC-------Ce
Confidence 223345555554 5555 45455678999998743 22 22333334566777743 355555432 46
Q ss_pred EEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe--ecccceEEEecCCcccccc
Q psy5806 1161 IEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIV 1238 (1332)
Q Consensus 1161 I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~ 1238 (1332)
|...++........+.........++++ ++.|+. -...+.|...|+........+. .....+|++ .+.
T Consensus 278 i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~-g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~-------~~~ 347 (435)
T 1p22_A 278 IKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVS-GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-------DNK 347 (435)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEE-EETTSCEEEEETTTCCEEEEECCCSSCEEEEEC-------CSS
T ss_pred EEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEE-EeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe-------cCC
Confidence 7777776555444444333444555554 455544 4567889999987443322222 444566666 566
Q ss_pred EEEEEECCCCEEEEEEecCC
Q psy5806 1239 ELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1239 ~lYwtd~~~~~V~~~~~~~g 1258 (1332)
+|+.. ...+.|...+..++
T Consensus 348 ~l~sg-~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 348 RIVSG-AYDGKIKVWDLVAA 366 (435)
T ss_dssp EEEEE-ETTSCEEEEEHHHH
T ss_pred EEEEE-eCCCcEEEEECCCC
Confidence 55554 46788888887665
No 345
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=94.47 E-value=0.016 Score=51.60 Aligned_cols=40 Identities=23% Similarity=0.535 Sum_probs=32.1
Q ss_pred ccccccCC-CCcce-eeeccCCCceEEeCCCCceecCCCCCcC
Q psy5806 390 PNYQSHCA-PKVCS-HICLPNKHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 390 p~~~n~C~-~g~Cs-hlCl~~~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
+...++|. ...|. +.|++.+++|+|.|+.||++.++ ++|+
T Consensus 41 C~dideC~~~~~C~~~~C~n~~g~y~C~C~~G~~g~~~-~~C~ 82 (82)
T 1emn_A 41 CVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPGPM-MTCE 82 (82)
T ss_dssp EEECCGGGTCCTTSSSCEEECSSSEEECCSSSSCCCSS-SCCC
T ss_pred cCCcccccCCCCCCCCEeECCCCCEEeECCCCeEeCCC-CccC
Confidence 34567776 55665 58999999999999999999888 7773
No 346
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=94.45 E-value=0.017 Score=58.90 Aligned_cols=41 Identities=27% Similarity=0.789 Sum_probs=34.6
Q ss_pred ccccCC-CCcc-eeeeccCCCceEEeCCCCceecCCCCCcCCC
Q psy5806 392 YQSHCA-PKVC-SHICLPNKHRFTCQCPLGLTLSPDNKSCSES 432 (1332)
Q Consensus 392 ~~n~C~-~g~C-shlCl~~~~~~~C~C~~G~~L~~d~~tC~~~ 432 (1332)
++|+|+ ...| .+.|++.+++|+|.|+.||+|.+++++|...
T Consensus 2 dideC~~~~~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~ 44 (162)
T 1uzk_A 2 DVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDT 44 (162)
T ss_dssp CCCGGGSTTSSBTSEEEEETTEEEEECCTTCEECTTSSBEECC
T ss_pred ccccCCCCCCCCCCEeECCCCCEEEeCCCCCeECCCCCcccCC
Confidence 357777 4667 4799999999999999999999999999753
No 347
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.45 E-value=10 Score=44.54 Aligned_cols=195 Identities=12% Similarity=0.000 Sum_probs=110.3
Q ss_pred ceEEEEEeC-CCcEEEEEeCCCCeEEEEECCCCCCcee--------------------EeecCCCCceeeEEEecCCeEE
Q psy5806 1046 SSIFFDYHY-SKNLIYFADMRSGNLRTFDMSDSTRIKP--------------------IPLMNDTIRDNFVIDWVANNIY 1104 (1332)
Q Consensus 1046 ~~~~id~d~-~~~~lY~sd~~~~~I~~~~l~~g~~~~~--------------------i~~~~~~~p~glAvDw~~~~LY 1104 (1332)
.+..+++.+ .++.++++-...+.|...++..+..... +.........-.++.+.++.|+
T Consensus 205 ~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~ 284 (464)
T 3v7d_B 205 TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVV 284 (464)
T ss_dssp CEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEE
T ss_pred ccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEE
Confidence 356777774 2334555555778888888775432211 0001111112234455466666
Q ss_pred EEcCCCceEEEEeeCC-ceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcc
Q psy5806 1105 YIDSQMHTINVARSDG-QHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPN 1183 (1332)
Q Consensus 1105 ~td~~~~~I~v~~ldG-~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~ 1183 (1332)
.+. ..+.|.++++.. +....+.........++++|...+|+..... +.|...++........+...-....
T Consensus 285 ~~~-~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d-------g~i~vwd~~~~~~~~~~~~h~~~v~ 356 (464)
T 3v7d_B 285 SGS-YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD-------TTIRIWDLENGELMYTLQGHTALVG 356 (464)
T ss_dssp EEE-TTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT-------SCEEEEETTTTEEEEEECCCSSCEE
T ss_pred EEe-CCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCC-------CcEEEEECCCCcEEEEEeCCCCcEE
Confidence 554 456899999874 3333354444568899999966666555432 4677778755444333433334455
Q ss_pred eEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1184 ELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1184 glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.++++ ++.|. +-...+.|...|+....+..... ......+++ .+.+..|.... .+.|...+..+|
T Consensus 357 ~~~~~--~~~l~-s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~--dg~i~iwd~~~g 422 (464)
T 3v7d_B 357 LLRLS--DKFLV-SAAADGSIRGWDANDYSRKFSYHHTNLSAITTF-----YVSDNILVSGS--ENQFNIYNLRSG 422 (464)
T ss_dssp EEEEC--SSEEE-EEETTSEEEEEETTTCCEEEEEECTTCCCEEEE-----EECSSEEEEEE--TTEEEEEETTTC
T ss_pred EEEEc--CCEEE-EEeCCCcEEEEECCCCceeeeecCCCCccEEEE-----EeCCCEEEEec--CCeEEEEECCCC
Confidence 66665 45554 44567889999997655444443 222333344 11444444443 688999988877
No 348
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=94.43 E-value=5.7 Score=44.79 Aligned_cols=195 Identities=11% Similarity=-0.039 Sum_probs=115.1
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKI 1125 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~ 1125 (1332)
.+..++|++.+..|+-+ ...+.|+..++..+.....+. ........+++.+.++.|..+. ..+.|.++++.+.....
T Consensus 78 ~V~~~~~~~~~~~l~s~-s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~~-~d~~i~~wd~~~~~~~~ 154 (343)
T 2xzm_R 78 FVSDLALSQENCFAISS-SWDKTLRLWDLRTGTTYKRFV-GHQSEVYSVAFSPDNRQILSAG-AEREIKLWNILGECKFS 154 (343)
T ss_dssp CEEEEEECSSTTEEEEE-ETTSEEEEEETTSSCEEEEEE-CCCSCEEEEEECSSTTEEEEEE-TTSCEEEEESSSCEEEE
T ss_pred ceEEEEECCCCCEEEEE-cCCCcEEEEECCCCcEEEEEc-CCCCcEEEEEECCCCCEEEEEc-CCCEEEEEeccCCceee
Confidence 36788999887766544 478899999987554333332 2344678899998777776544 46789999998765444
Q ss_pred Ee---cCCCCceEEEEcCCC---------cEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCE
Q psy5806 1126 LV---NDLMEPLAIAVYPRR---------GLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRR 1193 (1332)
Q Consensus 1126 ~~---~~~~~P~~iavdp~~---------g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~ 1193 (1332)
.. ........++++|.. +.++.+-... +.|..-+..+.....+ ...-.....+++.++++.
T Consensus 155 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~-~~h~~~v~~~~~s~~g~~ 227 (343)
T 2xzm_R 155 SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD------GRLKVWNTNFQIRYTF-KAHESNVNHLSISPNGKY 227 (343)
T ss_dssp CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT------SEEEEEETTTEEEEEE-ECCSSCEEEEEECTTSSE
T ss_pred eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC------CEEEEEcCCCceeEEE-cCccccceEEEECCCCCE
Confidence 32 122346778888753 1233333222 4566666554333222 222345678899988776
Q ss_pred EEEEEcCCCeEEEEecC-CCceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1194 LFWADSTNKRIEYCDFF-GRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1194 LY~~d~~~~~I~~~d~d-G~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
|.-+ ...+.|...|+. ......... ......|++ .+.+..|.. ...+.|...+..++
T Consensus 228 l~sg-s~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~-----sp~~~~la~--~~d~~v~iw~~~~~ 286 (343)
T 2xzm_R 228 IATG-GKDKKLLIWDILNLTYPQREFDAGSTINQIAF-----NPKLQWVAV--GTDQGVKIFNLMTQ 286 (343)
T ss_dssp EEEE-ETTCEEEEEESSCCSSCSEEEECSSCEEEEEE-----CSSSCEEEE--EESSCEEEEESSSC
T ss_pred EEEE-cCCCeEEEEECCCCcccceeecCCCcEEEEEE-----CCCCCEEEE--ECCCCEEEEEeCCC
Confidence 6554 467789888884 332222222 344567777 222333332 23456777776655
No 349
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=94.35 E-value=5.8 Score=46.21 Aligned_cols=196 Identities=10% Similarity=-0.014 Sum_probs=115.7
Q ss_pred ceEEEEEeCCC--cEEEEEeCCCCeEEEEECCCCCCc---------------------------------------eeEe
Q psy5806 1046 SSIFFDYHYSK--NLIYFADMRSGNLRTFDMSDSTRI---------------------------------------KPIP 1084 (1332)
Q Consensus 1046 ~~~~id~d~~~--~~lY~sd~~~~~I~~~~l~~g~~~---------------------------------------~~i~ 1084 (1332)
.+.+++|.+.+ ..|..+ ...+.|+..++..+... ..+.
T Consensus 95 ~V~~l~~~~~~~~~~l~s~-s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 95 KINKIRWLPQKNAAQFLLS-TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCEEEECCCCSSSEEEEE-ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred ceEEEEEcCCCCcceEEEe-CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 36788999886 455554 46777777665421110 0111
Q ss_pred ecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-Cce-EEEE-------ecCCCCceEEEEcCCCcEEEEEecCCCCC
Q psy5806 1085 LMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQH-KKIL-------VNDLMEPLAIAVYPRRGLLFYSHWGLYDN 1155 (1332)
Q Consensus 1085 ~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~-~~~~-------~~~~~~P~~iavdp~~g~Lywtd~~~~~~ 1155 (1332)
......+..|++.+.++.|..+ ..+.|.++++. +.. ..++ ..-......++++|....++.+-...
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d--- 248 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA--DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK--- 248 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE--CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT---
T ss_pred cCCCcceEEEEEcCCCCEEEEe--CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC---
Confidence 1223456788998766655544 57899999998 332 2222 12234578999999652444444333
Q ss_pred CCCCcEEEEecCCCce----EEEEecCCC------------CcceEEEecCCCEEEEEEcCCCeEEEEecCC--CceEEE
Q psy5806 1156 SPTTKIEKVYLDGSYR----TVLVEEDLA------------FPNELAIDFKQRRLFWADSTNKRIEYCDFFG--RSRKIV 1217 (1332)
Q Consensus 1156 ~~~~~I~r~~ldG~~~----~~l~~~~l~------------~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG--~~~~~~ 1217 (1332)
+.|...++..... ...+..... ....|+++++++.|..+.. +.|...|+.. .....+
T Consensus 249 ---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~~~~~~~ 323 (447)
T 3dw8_B 249 ---GTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNMENRPVETY 323 (447)
T ss_dssp ---SCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTCCSSCSCCE
T ss_pred ---CeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCCCcccccee
Confidence 4677777765443 233332222 5678999988877776654 8899999863 322222
Q ss_pred Eeecc----------------cceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1218 ISKVA----------------PYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1218 ~~~~~----------------P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
..... .+.+++ .+.+.+| .+-...+.|...+..++
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~-----s~~~~~l-~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCW-----NGSDSVV-MTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEE-----CTTSSEE-EEECSTTEEEEEETTTC
T ss_pred eccccccccccccccccccccceEEEE-----CCCCCEE-EEeccCCEEEEEEcCCC
Confidence 21111 233777 2334455 56667889999998877
No 350
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=94.25 E-value=0.015 Score=58.94 Aligned_cols=41 Identities=29% Similarity=0.659 Sum_probs=35.6
Q ss_pred CCcccCC-CCCCccccccCCCCccccCCCCeeEccCCccccc
Q psy5806 969 PNACGSN-NGGCSHLCLRNPTNFTCACPTGILLSADRRSCFS 1009 (1332)
Q Consensus 969 ~n~C~~~-nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~ 1009 (1332)
.++|... ++.|+|.|..+++++.|.|+.||.|..|+++|..
T Consensus 117 ~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 117 INECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp CCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred CcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCCCcccc
Confidence 5678764 4789999999999999999999999999999973
No 351
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.20 E-value=9.9 Score=43.40 Aligned_cols=177 Identities=12% Similarity=0.070 Sum_probs=102.6
Q ss_pred CcEEEEEeCCCCeEEEEECCCCCCceeEeecC----CCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEEEEecCC
Q psy5806 1056 KNLIYFADMRSGNLRTFDMSDSTRIKPIPLMN----DTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKKILVNDL 1130 (1332)
Q Consensus 1056 ~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~----~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~~~~~~~ 1130 (1332)
++.||+.. ..+.|+.+++.+|.......... .......+++ .+.||+.. ..+.|..+++. |+.+-......
T Consensus 143 ~~~v~v~~-~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~-~~g~l~~~d~~tG~~~w~~~~~~ 218 (376)
T 3q7m_A 143 DGLVLIHT-SNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGG-DNGRVSAVLMEQGQMIWQQRISQ 218 (376)
T ss_dssp TTEEEEEC-TTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECC-TTTEEEEEETTTCCEEEEEECCC
T ss_pred CCEEEEEc-CCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEc-CCCEEEEEECCCCcEEEEEeccc
Confidence 45677654 56678888876554433322111 0011345565 67888764 35678888874 66543321110
Q ss_pred C-----------CceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEc
Q psy5806 1131 M-----------EPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADS 1199 (1332)
Q Consensus 1131 ~-----------~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~ 1199 (1332)
. .....+++ .+.||+.... +.|..+++.... .+....+..+.+++++ +++||++..
T Consensus 219 ~~~~~~~~~~~~~~~~p~~~--~~~v~~~~~~-------g~l~~~d~~tG~--~~w~~~~~~~~~~~~~--~~~l~~~~~ 285 (376)
T 3q7m_A 219 ATGSTEIDRLSDVDTTPVVV--NGVVFALAYN-------GNLTALDLRSGQ--IMWKRELGSVNDFIVD--GNRIYLVDQ 285 (376)
T ss_dssp -----------CCCCCCEEE--TTEEEEECTT-------SCEEEEETTTCC--EEEEECCCCEEEEEEE--TTEEEEEET
T ss_pred CCCCcccccccccCCCcEEE--CCEEEEEecC-------cEEEEEECCCCc--EEeeccCCCCCCceEE--CCEEEEEcC
Confidence 0 00111222 5788887643 468888874323 2233334455667775 789999874
Q ss_pred CCCeEEEEecC-CCceEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1200 TNKRIEYCDFF-GRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1200 ~~~~I~~~d~d-G~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.+.|..+|.. |..+-..-. .....+.++ .++.||+.+. .+.|+.++..+|
T Consensus 286 -~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~-------~~~~l~v~~~-~g~l~~~d~~tG 338 (376)
T 3q7m_A 286 -NDRVMALTIDGGVTLWTQSDLLHRLLTSPVL-------YNGNLVVGDS-EGYLHWINVEDG 338 (376)
T ss_dssp -TCCEEEEETTTCCEEEEECTTTTSCCCCCEE-------ETTEEEEECT-TSEEEEEETTTC
T ss_pred -CCeEEEEECCCCcEEEeecccCCCcccCCEE-------ECCEEEEEeC-CCeEEEEECCCC
Confidence 5689999985 433222111 223445677 7899999975 578999999888
No 352
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.18 E-value=8.6 Score=42.63 Aligned_cols=199 Identities=7% Similarity=-0.063 Sum_probs=115.6
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCcee----EeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCc
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKP----IPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQ 1121 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~----i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~ 1121 (1332)
.+.+|+|+|.++.+.++-...++|+.-++..+..... .+......+..+++.+.++.|+.+. ..+.|.+.+....
T Consensus 40 ~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~-~d~~i~~~~~~~~ 118 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS-WDGTLRLWDLTTG 118 (340)
T ss_dssp CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTT
T ss_pred CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc-ccccceEEeeccc
Confidence 3679999998766666666788898888764332211 1111234678899988777776554 4567888888765
Q ss_pred eEEE-EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecC-CCCcceEEEecCC-CEEEEEE
Q psy5806 1122 HKKI-LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEED-LAFPNELAIDFKQ-RRLFWAD 1198 (1332)
Q Consensus 1122 ~~~~-~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~-l~~p~glaiD~~~-~~LY~~d 1198 (1332)
.... ..........+...+....|+..... ..+...++.+.....+.... ......+++.+.. ..++.+-
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-------~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~ 191 (340)
T 4aow_A 119 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD-------KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSC 191 (340)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSCEEEEETT-------SCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEE
T ss_pred ceeeeecCCCCceeEEEEeecCccceeecCC-------CeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEE
Confidence 5444 43444566777777765555544332 34555566555443332211 2334456665544 3445555
Q ss_pred cCCCeEEEEecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1199 STNKRIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1199 ~~~~~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
...+.|...|+.......... .....+|++ .+ ++.+.++-...+.|...+..++
T Consensus 192 ~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~-----s~-~~~~l~s~s~Dg~i~iwd~~~~ 247 (340)
T 4aow_A 192 GWDKLVKVWNLANCKLKTNHIGHTGYLNTVTV-----SP-DGSLCASGGKDGQAMLWDLNEG 247 (340)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-----CT-TSSEEEEEETTCEEEEEETTTT
T ss_pred cCCCEEEEEECCCCceeeEecCCCCcEEEEEE-----CC-CCCEEEEEeCCCeEEEEEeccC
Confidence 566778888886543322222 444567777 22 3334444446677777776665
No 353
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=94.11 E-value=10 Score=44.44 Aligned_cols=183 Identities=9% Similarity=0.028 Sum_probs=106.2
Q ss_pred EEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEEEEe
Q psy5806 1049 FFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKKILV 1127 (1332)
Q Consensus 1049 ~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~~~~ 1127 (1332)
.+.++ ++.|+... ..+.|+..++.++.....+ ....+....++++ ++.| ++-...+.|.++++. |+....+.
T Consensus 124 ~~~~~--g~~l~sg~-~dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~--~~~l-~s~~~dg~i~vwd~~~~~~~~~~~ 196 (445)
T 2ovr_B 124 CLQFC--GNRIVSGS-DDNTLKVWSAVTGKCLRTL-VGHTGGVWSSQMR--DNII-ISGSTDRTLKVWNAETGECIHTLY 196 (445)
T ss_dssp EEEEE--TTEEEEEE-TTSCEEEEETTTCCEEEEC-CCCSSCEEEEEEE--TTEE-EEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEEc--CCEEEEEE-CCCcEEEEECCCCcEEEEE-cCCCCCEEEEEec--CCEE-EEEeCCCeEEEEECCcCcEEEEEC
Confidence 45454 55555554 7888999998754333222 2223355667776 5544 555566789999987 44444454
Q ss_pred cCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEE
Q psy5806 1128 NDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYC 1207 (1332)
Q Consensus 1128 ~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~ 1207 (1332)
........+++++ ..|+..... +.|...++........+.........+++ +++.|+.+ ...+.|...
T Consensus 197 ~h~~~v~~~~~~~--~~l~s~s~d-------g~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~dg~i~iw 264 (445)
T 2ovr_B 197 GHTSTVRCMHLHE--KRVVSGSRD-------ATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSG-AYDFMVKVW 264 (445)
T ss_dssp CCSSCEEEEEEET--TEEEEEETT-------SEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEE-ETTSCEEEE
T ss_pred CCCCcEEEEEecC--CEEEEEeCC-------CEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEE-cCCCEEEEE
Confidence 4444567788875 345444332 46777777655544444433344555655 45555554 467788888
Q ss_pred ecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1208 DFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1208 d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
|+.......... .....++++ .+.+|+... ..+.|...+..++
T Consensus 265 d~~~~~~~~~~~~~~~~v~~~~~-------~~~~l~~~~-~d~~i~i~d~~~~ 309 (445)
T 2ovr_B 265 DPETETCLHTLQGHTNRVYSLQF-------DGIHVVSGS-LDTSIRVWDVETG 309 (445)
T ss_dssp EGGGTEEEEEECCCSSCEEEEEE-------CSSEEEEEE-TTSCEEEEETTTC
T ss_pred ECCCCcEeEEecCCCCceEEEEE-------CCCEEEEEe-CCCeEEEEECCCC
Confidence 886443222222 344456666 566555554 5677888887766
No 354
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.00 E-value=11 Score=43.90 Aligned_cols=192 Identities=11% Similarity=0.047 Sum_probs=107.1
Q ss_pred eEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEEE
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKKI 1125 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~~ 1125 (1332)
+..+++ .++.|... ...+.|+..++.++.....+. ...+.+..|++| ++.| ++-...+.|.++++. |+....
T Consensus 136 v~~~~~--d~~~l~~g-~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~~--~~~l-~sg~~dg~i~vwd~~~~~~~~~ 208 (435)
T 1p22_A 136 VYCLQY--DDQKIVSG-LRDNTIKIWDKNTLECKRILT-GHTGSVLCLQYD--ERVI-ITGSSDSTVRVWDVNTGEMLNT 208 (435)
T ss_dssp EEEEEC--CSSEEEEE-ESSSCEEEEESSSCCEEEEEC-CCSSCEEEEECC--SSEE-EEEETTSCEEEEESSSCCEEEE
T ss_pred EEEEEE--CCCEEEEE-eCCCeEEEEeCCCCeEEEEEc-CCCCcEEEEEEC--CCEE-EEEcCCCeEEEEECCCCcEEEE
Confidence 455655 34445444 477889999877543333322 223345555553 5555 555566789999997 544444
Q ss_pred EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEE---EEecCCCCcceEEEecCCCEEEEEEcCCC
Q psy5806 1126 LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTV---LVEEDLAFPNELAIDFKQRRLFWADSTNK 1202 (1332)
Q Consensus 1126 ~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~---l~~~~l~~p~glaiD~~~~~LY~~d~~~~ 1202 (1332)
+.........|++++ +.|+.... . +.|...++....... .....-.....+++ +++.|+.+ ...+
T Consensus 209 ~~~h~~~v~~l~~~~--~~l~s~s~-d------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~-~~dg 276 (435)
T 1p22_A 209 LIHHCEAVLHLRFNN--GMMVTCSK-D------RSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSA-SGDR 276 (435)
T ss_dssp ECCCCSCEEEEECCT--TEEEEEET-T------SCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEE-ETTS
T ss_pred EcCCCCcEEEEEEcC--CEEEEeeC-C------CcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEE-eCCC
Confidence 544445567777765 35544432 2 457777776544332 22222233445555 46666655 4567
Q ss_pred eEEEEecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEe
Q psy5806 1203 RIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIR 1268 (1332)
Q Consensus 1203 ~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~ 1268 (1332)
.|...|+........+. ......++. .+..|+ +-...+.|...+..++ .....+.
T Consensus 277 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~-------~~~~l~-~g~~dg~i~iwd~~~~---~~~~~~~ 333 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNGHKRGIACLQY-------RDRLVV-SGSSDNTIRLWDIECG---ACLRVLE 333 (435)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEE-------ETTEEE-EEETTSCEEEEETTTC---CEEEEEC
T ss_pred eEEEEECCcCcEEEEEcCCCCcEEEEEe-------CCCEEE-EEeCCCeEEEEECCCC---CEEEEEe
Confidence 89998886543322222 334455555 444444 4446778888887776 4444444
No 355
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.98 E-value=11 Score=46.15 Aligned_cols=76 Identities=14% Similarity=0.104 Sum_probs=49.8
Q ss_pred ceEEEecCCCEEEEEEc------------------------------------CCCeEEEEecC-CCceEEEEeecccce
Q psy5806 1183 NELAIDFKQRRLFWADS------------------------------------TNKRIEYCDFF-GRSRKIVISKVAPYG 1225 (1332)
Q Consensus 1183 ~glaiD~~~~~LY~~d~------------------------------------~~~~I~~~d~d-G~~~~~~~~~~~P~g 1225 (1332)
.++++|+++++||+... ..+.|..+|+. |+.+-.+-....+.+
T Consensus 389 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~ 468 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWG 468 (571)
T ss_dssp CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCS
T ss_pred CCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccc
Confidence 35899999999999742 24678888875 443322211222233
Q ss_pred --EEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEec
Q psy5806 1226 --LSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRS 1269 (1332)
Q Consensus 1226 --lav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~ 1269 (1332)
++. .++.||+.. ..+.|+.+|..+| +.+..+..
T Consensus 469 ~~~~t-------~gg~v~~g~-~dg~l~a~D~~tG---~~lw~~~~ 503 (571)
T 2ad6_A 469 GTLYT-------KGGLVWYAT-LDGYLKALDNKDG---KELWNFKM 503 (571)
T ss_dssp BCEEE-------TTTEEEEEC-TTSEEEEEETTTC---CEEEEEEC
T ss_pred eeEEE-------CCCEEEEEc-CCCeEEEEECCCC---CEEEEEeC
Confidence 344 688899864 6789999999998 65555443
No 356
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.95 E-value=1.9 Score=55.15 Aligned_cols=198 Identities=9% Similarity=0.004 Sum_probs=115.4
Q ss_pred ceEEEEEeCC--CcEEEEEeCCCCeEEEEECCCCCCcee-EeecCCCCceeeEEEec--CCeEEEEcCCCceEEEEeeCC
Q psy5806 1046 SSIFFDYHYS--KNLIYFADMRSGNLRTFDMSDSTRIKP-IPLMNDTIRDNFVIDWV--ANNIYYIDSQMHTINVARSDG 1120 (1332)
Q Consensus 1046 ~~~~id~d~~--~~~lY~sd~~~~~I~~~~l~~g~~~~~-i~~~~~~~p~glAvDw~--~~~LY~td~~~~~I~v~~ldG 1120 (1332)
.+.+++|.+. ++.|+.+. ..+.|+..++.++..... ........+..+++.+. ++.| ++-...+.|.++++..
T Consensus 55 ~V~~l~~s~~~~~~~l~s~s-~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l-~sgs~dg~I~vwdl~~ 132 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILASCS-YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLL-LVASSDGKVSVVEFKE 132 (753)
T ss_dssp CEEEEEECCTTSCSEEEEEE-TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEE-EEEETTSEEEEEECCS
T ss_pred ceEEEEecCCCCCCEEEEEe-CCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEE-EEEeCCCcEEEEEeec
Confidence 4678899876 55555544 678888888774331122 22223446788999877 4455 4545667999999975
Q ss_pred c---eEEEEecCCCCceEEEEcCC------------CcEEEEEecCCCCCCCCCcEEEEecCCCceE-EE---EecCCCC
Q psy5806 1121 Q---HKKILVNDLMEPLAIAVYPR------------RGLLFYSHWGLYDNSPTTKIEKVYLDGSYRT-VL---VEEDLAF 1181 (1332)
Q Consensus 1121 ~---~~~~~~~~~~~P~~iavdp~------------~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~-~l---~~~~l~~ 1181 (1332)
. ....+.........++++|. ++.++.+.... +.|...++...... .+ +...-..
T Consensus 133 ~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~d------g~I~iwd~~~~~~~~~~~~~~~~h~~~ 206 (753)
T 3jro_A 133 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD------NLVKIWKYNSDAQTYVLESTLEGHSDW 206 (753)
T ss_dssp SSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETT------SCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred CCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECC------CeEEEEeccCCcccceeeeeecCCCCc
Confidence 4 22224344456788999995 35555554333 45666666443221 12 2222345
Q ss_pred cceEEEecCC--CEEEEEEcCCCeEEEEecCCCce---EEEEe----ecccceEEEecCCccccccEEEEEECCCCEEEE
Q psy5806 1182 PNELAIDFKQ--RRLFWADSTNKRIEYCDFFGRSR---KIVIS----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVI 1252 (1332)
Q Consensus 1182 p~glaiD~~~--~~LY~~d~~~~~I~~~d~dG~~~---~~~~~----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~ 1252 (1332)
...|++.++. +.+..+-...+.|...|+..... ..+.. .....++++ .+.+. ++++-...+.|..
T Consensus 207 V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~-----spdg~-~l~s~s~Dg~I~v 280 (753)
T 3jro_A 207 VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASW-----SLSGN-VLALSGGDNKVTL 280 (753)
T ss_dssp EEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEE-----CTTTC-CEEEECSSSCEEC
T ss_pred EEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEE-----cCCCC-EEEEEcCCCEEEE
Confidence 6788898873 45555556778899888875421 11111 344567777 22333 4444456777877
Q ss_pred EEecC
Q psy5806 1253 AREKS 1257 (1332)
Q Consensus 1253 ~~~~~ 1257 (1332)
.+..+
T Consensus 281 wd~~~ 285 (753)
T 3jro_A 281 WKENL 285 (753)
T ss_dssp CBCCS
T ss_pred EecCC
Confidence 77654
No 357
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.87 E-value=2.2 Score=54.51 Aligned_cols=201 Identities=7% Similarity=-0.026 Sum_probs=117.4
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeE-eecCCCCceeeEEEecC-CeEEEEcCCCceEEEEeeCCceE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPI-PLMNDTIRDNFVIDWVA-NNIYYIDSQMHTINVARSDGQHK 1123 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i-~~~~~~~p~glAvDw~~-~~LY~td~~~~~I~v~~ldG~~~ 1123 (1332)
.+..++|++.++.|+.+. ..+.|...++.+++..... .....+.+..|++.... +++.++-...+.|.++++++...
T Consensus 11 ~V~~l~~s~dg~~latg~-~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~ 89 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCS-SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW 89 (753)
T ss_dssp CEEEECCCSSSCCEEEEE-TTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE
T ss_pred eeEEEEECCCCCeEEEEE-CCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc
Confidence 357888888877666654 6788888776633322221 21223456778876551 44445555677899999986532
Q ss_pred ---EEEecCCCCceEEEEcCCC-cEEEEEecCCCCCCCCCcEEEEecCCCc--eEEEEecCCCCcceEEEecC-------
Q psy5806 1124 ---KILVNDLMEPLAIAVYPRR-GLLFYSHWGLYDNSPTTKIEKVYLDGSY--RTVLVEEDLAFPNELAIDFK------- 1190 (1332)
Q Consensus 1124 ---~~~~~~~~~P~~iavdp~~-g~Lywtd~~~~~~~~~~~I~r~~ldG~~--~~~l~~~~l~~p~glaiD~~------- 1190 (1332)
..+.........++++|.. |.++.+-... +.|...++.... ....+.........+++.+.
T Consensus 90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC------
T ss_pred cccccccCCCCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccc
Confidence 2233344567899999962 4444443332 467777776542 22233333345667777773
Q ss_pred -----CCEEEEEEcCCCeEEEEecCCCc-e-EEEEe----ecccceEEEecCCccccc--cEEEEEECCCCEEEEEEecC
Q psy5806 1191 -----QRRLFWADSTNKRIEYCDFFGRS-R-KIVIS----KVAPYGLSVRQSPGKAFI--VELYWTDWEAMSVVIAREKS 1257 (1332)
Q Consensus 1191 -----~~~LY~~d~~~~~I~~~d~dG~~-~-~~~~~----~~~P~glav~~~~~~~~~--~~lYwtd~~~~~V~~~~~~~ 1257 (1332)
++.+..+-...+.|...|+.... . ..+.. .....+|++ .+.+ +.+..+-...+.|...+..+
T Consensus 164 ~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~-----sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW-----SPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp ---CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE-----CCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred cccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEe-----ccCCCCCCEEEEEecCCEEEEecCCC
Confidence 23444444567889988886442 2 22222 344567777 2221 44555555678888888876
Q ss_pred C
Q psy5806 1258 D 1258 (1332)
Q Consensus 1258 g 1258 (1332)
+
T Consensus 239 ~ 239 (753)
T 3jro_A 239 E 239 (753)
T ss_dssp S
T ss_pred C
Confidence 5
No 358
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.79 E-value=10 Score=42.26 Aligned_cols=143 Identities=4% Similarity=-0.062 Sum_probs=79.4
Q ss_pred CCCccceeEecCC--CeEEEEeCCCCeEEEEeCCC--CceEEEEecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEE
Q psy5806 781 LNRTESIAVDAIG--RKIYWTDMNAQTIMVSDIDG--KNAKVLFWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEM 856 (1332)
Q Consensus 781 ~~~p~glAvD~~~--~nLYwtD~~~~~I~v~~ldG--~~~~~l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r 856 (1332)
-..+..+++.... +++.++-...+.|.+.+++. ......+........+++++|...+|+.... . ..|..
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~--d----g~v~i 112 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC--D----KTAKM 112 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET--T----SEEEE
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC--C----CcEEE
Confidence 3455667777664 45666666677899998864 3321233323356789999997556665442 2 45766
Q ss_pred EecCCCCcEEEecccccCceeEE--eCCCCCeEEEEeCCCCeEEEEccCCCceeEEeccCCcceEEEEeCCEEEEEe
Q psy5806 857 AHMDGTNRAVFETEVIWPSCLAI--DYSDNPKLYWVDTSKHTIEYKTLATGRAKRAYAVQSHPYTLTVLDYYVYWTD 931 (1332)
Q Consensus 857 ~~~dG~~~~~l~~~l~~P~gl~i--D~~~~~~lYw~d~~~~~I~~~~~dG~~~~~l~~~~~~P~~la~~~~~iywtD 931 (1332)
.+++......+...-.....+++ ...+ +++++-...+.|...++...........-.....+....+.++...
T Consensus 113 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (368)
T 3mmy_A 113 WDLSSNQAIQIAQHDAPVKTIHWIKAPNY--SCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVAT 187 (368)
T ss_dssp EETTTTEEEEEEECSSCEEEEEEEECSSC--EEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEE
T ss_pred EEcCCCCceeeccccCceEEEEEEeCCCC--CEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEe
Confidence 67665443333322444557777 5544 4444444567888888754433222222223445555555544443
No 359
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=93.57 E-value=11 Score=41.74 Aligned_cols=196 Identities=9% Similarity=-0.071 Sum_probs=113.8
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKI 1125 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~ 1125 (1332)
.+..++|++.++.|+... ..+.|...+...+ ...............+++...++.|+.+ ...+.+.+.++.+.....
T Consensus 88 ~V~~~~~s~dg~~l~s~~-~d~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~s~-s~d~~~~~~d~~~~~~~~ 164 (340)
T 4aow_A 88 FVSDVVISSDGQFALSGS-WDGTLRLWDLTTG-TTTRRFVGHTKDVLSVAFSSDNRQIVSG-SRDKTIKLWNTLGVCKYT 164 (340)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSEEEEEETTTT-EEEEEEECCSSCEEEEEECTTSSCEEEE-ETTSCEEEECTTSCEEEE
T ss_pred CEEEEEECCCCCEEEEEc-ccccceEEeeccc-ceeeeecCCCCceeEEEEeecCccceee-cCCCeEEEEEeCCCceEE
Confidence 467899999888777665 6778888886632 2222222334455566666656666544 445678888887665544
Q ss_pred E--ecCCCCceEEEEcCCCcE-EEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCC
Q psy5806 1126 L--VNDLMEPLAIAVYPRRGL-LFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNK 1202 (1332)
Q Consensus 1126 ~--~~~~~~P~~iavdp~~g~-Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~ 1202 (1332)
. .........+++.+.... ++.+-... ..|...++........+...-...+.|+++++++.|+-+ ...+
T Consensus 165 ~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d------~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-s~Dg 237 (340)
T 4aow_A 165 VQDESHSEWVSCVRFSPNSSNPIIVSCGWD------KLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASG-GKDG 237 (340)
T ss_dssp ECSSSCSSCEEEEEECSCSSSCEEEEEETT------SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE-ETTC
T ss_pred EEeccccCcccceEEccCCCCcEEEEEcCC------CEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEE-eCCC
Confidence 2 222345667777765433 44443322 457777776655444443333456788999877766655 4667
Q ss_pred eEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1203 RIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1203 ~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.|...|+.......... ......+++ ..+++ +++-...+.|...+..++
T Consensus 238 ~i~iwd~~~~~~~~~~~~~~~v~~~~~------~~~~~-~~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 238 QAMLWDLNEGKHLYTLDGGDIINALCF------SPNRY-WLCAATGPSIKIWDLEGK 287 (340)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEE------CSSSS-EEEEEETTEEEEEETTTT
T ss_pred eEEEEEeccCceeeeecCCceEEeeec------CCCCc-eeeccCCCEEEEEECCCC
Confidence 88888887544333333 334445555 11223 233334567777776554
No 360
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.51 E-value=14 Score=42.85 Aligned_cols=244 Identities=10% Similarity=0.042 Sum_probs=133.5
Q ss_pred cceEEEEeecceEEEEeCCCCCCCCcccccCC-ccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCC
Q psy5806 1012 REFLLYTSRFGVIRRISLDTADLLPVTLPFPE-YMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTI 1090 (1332)
Q Consensus 1012 ~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~-~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~ 1090 (1332)
...|.++..+. |+.-++.+..... +....+ ...+.+|+|++.++.|.... ..+.|...++.++.....+ ....
T Consensus 116 ~n~lAvgld~t-V~lWd~~tg~~~~-~~~~~~~~~~V~sv~fspdg~~lasgs-~Dg~v~iWd~~~~~~~~~~---~~h~ 189 (420)
T 4gga_A 116 GNVLAVALDNS-VYLWSASSGDILQ-LLQMEQPGEYISSVAWIKEGNYLAVGT-SSAEVQLWDVQQQKRLRNM---TSHS 189 (420)
T ss_dssp TSEEEEEETTE-EEEEETTTCCEEE-EEECCSTTCCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEEEE---CCCS
T ss_pred CCEEEEEeCCE-EEEEECCCCCEEE-EEEecCCCCcEEEEEECCCCCEEEEEE-CCCeEEEEEcCCCcEEEEE---eCCC
Confidence 34555555555 6666655432211 112222 23478999999888776654 7788999997744322222 1222
Q ss_pred ceeeEEEecCCeEEEEcCCCceEEEEeeCCceEE--EEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCC
Q psy5806 1091 RDNFVIDWVANNIYYIDSQMHTINVARSDGQHKK--ILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDG 1168 (1332)
Q Consensus 1091 p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~--~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG 1168 (1332)
..-.++.|.+..| ++....+.+.+.+....... .+.........+...|...+|.... .. +.|...++..
T Consensus 190 ~~v~~~s~~~~~l-~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~-~D------~~v~i~~~~~ 261 (420)
T 4gga_A 190 ARVGSLSWNSYIL-SSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGG-ND------NLVNVWPSAP 261 (420)
T ss_dssp SCEEEEEEETTEE-EEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEE-TT------SCEEEEESSC
T ss_pred CceEEEeeCCCEE-EEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeee-cc------ccceEEeecc
Confidence 2334555546655 44445667878877643332 2444456678889998655554433 22 3455555533
Q ss_pred Cce----EEEEecCCCCcceEEEecCCCEEEEEEc--CCCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEE
Q psy5806 1169 SYR----TVLVEEDLAFPNELAIDFKQRRLFWADS--TNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELY 1241 (1332)
Q Consensus 1169 ~~~----~~l~~~~l~~p~glaiD~~~~~LY~~d~--~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lY 1241 (1332)
... .............+++.+.+..++.+-. ..+.|...|+........+. ...+.++.. ...+++|+
T Consensus 262 ~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~-----~~~~~~lv 336 (420)
T 4gga_A 262 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILW-----SPHYKELI 336 (420)
T ss_dssp CSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEE-----ETTTTEEE
T ss_pred ccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeee-----cCCCCeEE
Confidence 221 1111212234556777776666655432 35678877876443333333 445555655 23456666
Q ss_pred EEE-CCCCEEEEEEecCCCCcceEEEEecCCCCeeeE
Q psy5806 1242 WTD-WEAMSVVIAREKSDTGQWDVHLIRSNQEDFLNI 1277 (1332)
Q Consensus 1242 wtd-~~~~~V~~~~~~~g~~~~~~~~~~~~~~~~~~i 1277 (1332)
.+. ...+.|...+..++ ..+..+......+..|
T Consensus 337 ~~sg~~d~~I~iwd~~~~---~~v~~l~gH~~~V~~l 370 (420)
T 4gga_A 337 SGHGFAQNQLVIWKYPTM---AKVAELKGHTSRVLSL 370 (420)
T ss_dssp EEECTTTCCEEEEETTTC---CEEEEECCCSSCEEEE
T ss_pred EEEecCCCEEEEEECCCC---cEEEEEcCCCCCEEEE
Confidence 664 35688888888777 5555555444444444
No 361
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=93.51 E-value=0.041 Score=41.11 Aligned_cols=33 Identities=27% Similarity=0.917 Sum_probs=23.1
Q ss_pred ccCCCCccee--eeccCCCceEEeCCCCceecCCCCCcC
Q psy5806 394 SHCAPKVCSH--ICLPNKHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 394 n~C~~g~Csh--lCl~~~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
++|....|.+ .|++..++|+|.||.||+ |+.|+
T Consensus 4 d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~----G~~Ce 38 (39)
T 1edm_B 4 DQCESNPCLNGGSCKDDINSYECWCPFGFE----GKNCE 38 (39)
T ss_dssp CTTTTCCCCTTCEEEEETTEEEEECCTTCC----STTSC
T ss_pred ccCCCCCCCCCCEeEcCCCceEeECCCCCc----CCccC
Confidence 4444334432 677788999999999996 55664
No 362
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=93.42 E-value=0.042 Score=62.68 Aligned_cols=45 Identities=33% Similarity=0.864 Sum_probs=39.0
Q ss_pred Ccc-ccccCCC---CcceeeeccCCCceEEeCCCCceecCCCCCcCCCc
Q psy5806 389 QPN-YQSHCAP---KVCSHICLPNKHRFTCQCPLGLTLSPDNKSCSESP 433 (1332)
Q Consensus 389 qp~-~~n~C~~---g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~~~~ 433 (1332)
.++ +.++|.. +.|.|.|++..++|+|.|+.||.+..++++|.+..
T Consensus 38 ~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~ 86 (317)
T 3h5c_B 38 NCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHD 86 (317)
T ss_dssp SSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTSSCCEECS
T ss_pred ccccCcccCCCCCCCCCcCccccCCCeeEEecccccccccccccccccc
Confidence 344 6789984 78999999999999999999999999999997643
No 363
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=93.37 E-value=4.9 Score=52.51 Aligned_cols=192 Identities=8% Similarity=-0.010 Sum_probs=118.0
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEee-cCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPL-MNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHK 1123 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~-~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~ 1123 (1332)
.+..++|++.++.|.... ..+.|+..+... .+.+.. ........|++.+ ++.|. +-...+.|.+++++ ++..
T Consensus 19 ~V~~lafspdg~~lAsgs-~Dg~I~lw~~~~---~~~~~~~~~~~~V~~l~fsp-g~~L~-S~s~D~~v~lWd~~~~~~~ 92 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIAT-VTGEVHIYGQQQ---VEVVIKLEDRSAIKEMRFVK-GIYLV-VINAKDTVYVLSLYSQKVL 92 (902)
T ss_dssp CEEEEEEETTTTEEEEEE-TTSEEEEECSTT---CEEEEECSSCCCEEEEEEET-TTEEE-EEETTCEEEEEETTTCSEE
T ss_pred CcEEEEECCCCCEEEEEe-CCCEEEEEeCCC---cEEEEEcCCCCCEEEEEEcC-CCEEE-EEECcCeEEEEECCCCcEE
Confidence 367999999988776655 678888887542 222221 2334578899997 55454 44456799999997 4444
Q ss_pred EEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEE-E----------ecCCCCcceEEEecCCC
Q psy5806 1124 KILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVL-V----------EEDLAFPNELAIDFKQR 1192 (1332)
Q Consensus 1124 ~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l-~----------~~~l~~p~glaiD~~~~ 1192 (1332)
..+. .......++++|...+|+..... +.|...++++...... + .........|++.+++.
T Consensus 93 ~~~~-~~~~V~~v~~sp~g~~l~sgs~d-------g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~ 164 (902)
T 2oaj_A 93 TTVF-VPGKITSIDTDASLDWMLIGLQN-------GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDI 164 (902)
T ss_dssp EEEE-CSSCEEEEECCTTCSEEEEEETT-------SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEE
T ss_pred EEEc-CCCCEEEEEECCCCCEEEEEcCC-------CcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCC
Confidence 4443 23567899999977777776543 4677778876553211 1 01123466889988655
Q ss_pred EEEEEEcCCCeEEEEecCCCceEEEEe-e-------------------cccceEEEecCCccccccEEEEEECCCCEEEE
Q psy5806 1193 RLFWADSTNKRIEYCDFFGRSRKIVIS-K-------------------VAPYGLSVRQSPGKAFIVELYWTDWEAMSVVI 1252 (1332)
Q Consensus 1193 ~LY~~d~~~~~I~~~d~dG~~~~~~~~-~-------------------~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~ 1252 (1332)
.+..+-...+.| ..|+........+. . ....++++ + + ++.++.+-...+.|..
T Consensus 165 ~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~f--s---p-dg~~lasgs~Dg~i~l 237 (902)
T 2oaj_A 165 GTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLY--H---P-NSLHIITIHEDNSLVF 237 (902)
T ss_dssp EEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEE--C---T-TSSEEEEEETTCCEEE
T ss_pred CEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEE--c---C-CCCEEEEEECCCeEEE
Confidence 555555667778 77886543222221 1 22456677 1 2 2344445556777888
Q ss_pred EEecCC
Q psy5806 1253 AREKSD 1258 (1332)
Q Consensus 1253 ~~~~~g 1258 (1332)
.+..+|
T Consensus 238 Wd~~~g 243 (902)
T 2oaj_A 238 WDANSG 243 (902)
T ss_dssp EETTTC
T ss_pred EECCCC
Confidence 877665
No 364
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=93.15 E-value=0.019 Score=57.48 Aligned_cols=40 Identities=35% Similarity=0.895 Sum_probs=34.5
Q ss_pred CCcccCCCCCCcc-ccccCCCCccccCCCCeeEccCCcccc
Q psy5806 969 PNACGSNNGGCSH-LCLRNPTNFTCACPTGILLSADRRSCF 1008 (1332)
Q Consensus 969 ~n~C~~~nGgCsh-lCl~~p~~~~C~Cp~g~~l~~d~~tC~ 1008 (1332)
.++|..+++.|.+ .|+.++++|+|.||.||.+..++++|+
T Consensus 107 ideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C~ 147 (147)
T 2w86_A 107 IDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL 147 (147)
T ss_dssp CCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCBC
T ss_pred cccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCeeC
Confidence 4677766677875 899999999999999999999999985
No 365
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=92.97 E-value=9.2 Score=43.01 Aligned_cols=157 Identities=9% Similarity=-0.007 Sum_probs=95.2
Q ss_pred ceEEEEEeC--CCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCC-ce
Q psy5806 1046 SSIFFDYHY--SKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDG-QH 1122 (1332)
Q Consensus 1046 ~~~~id~d~--~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG-~~ 1122 (1332)
.+..+++++ .++.+... ...+.|+..++..+................+++.+.+..| .+-...+.|.++++.. +.
T Consensus 127 ~v~~~~~~~~~~~~~l~s~-s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~l-asg~~dg~i~iwd~~~~~~ 204 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWA-DNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLL-ALYSPDGILDVYNLSSPDQ 204 (343)
T ss_dssp CEEEEECCC---CCEEEEE-ETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEE-EEECTTSCEEEEESSCTTS
T ss_pred CEEEEEcCCCCCCCEEEEE-eCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEE-EEEcCCCEEEEEECCCCCC
Confidence 467888988 66555444 4788899999875443222211222357788998755544 5545677999999974 43
Q ss_pred E-EEEec-CCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEec---CCCCc--ceEEEecCCCEEE
Q psy5806 1123 K-KILVN-DLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEE---DLAFP--NELAIDFKQRRLF 1195 (1332)
Q Consensus 1123 ~-~~~~~-~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~---~l~~p--~glaiD~~~~~LY 1195 (1332)
. ..+.. -......|+++|...+|..+. . ..|..-++........+.. ..... ..++++++++.|.
T Consensus 205 ~~~~~~~~h~~~v~~l~fs~~g~~l~s~~--~------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 276 (343)
T 3lrv_A 205 ASSRFPVDEEAKIKEVKFADNGYWMVVEC--D------QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMI 276 (343)
T ss_dssp CCEECCCCTTSCEEEEEECTTSSEEEEEE--S------SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEE
T ss_pred CccEEeccCCCCEEEEEEeCCCCEEEEEe--C------CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEE
Confidence 3 33433 245688999999655555554 2 2577777755443211110 00111 2499999888888
Q ss_pred EEEcCCCeEEEEecCCC
Q psy5806 1196 WADSTNKRIEYCDFFGR 1212 (1332)
Q Consensus 1196 ~~d~~~~~I~~~d~dG~ 1212 (1332)
.+....+.|...+++..
T Consensus 277 ~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 277 AYSNESNSLTIYKFDKK 293 (343)
T ss_dssp EEETTTTEEEEEEECTT
T ss_pred EecCCCCcEEEEEEccc
Confidence 76655778888888643
No 366
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=92.87 E-value=14 Score=41.18 Aligned_cols=198 Identities=9% Similarity=0.017 Sum_probs=104.2
Q ss_pred cceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCC----cee--EeecCCCCceeeEEEecCCeEEEEcCCCceEEEEee
Q psy5806 1045 MSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTR----IKP--IPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARS 1118 (1332)
Q Consensus 1045 ~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~----~~~--i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~l 1118 (1332)
..+.+++|++.++.|.-.. ..+.|+..++..+.. .+. .+.........+++.+.++.|. +-...+.|.++++
T Consensus 59 ~~v~~v~~sp~~~~las~s-~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~la-s~s~D~~v~iwd~ 136 (330)
T 2hes_X 59 KAIRSVAWRPHTSLLAAGS-FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLA-TCSRDKSVWIWET 136 (330)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEE-EEETTSCEEEEEC
T ss_pred CCEEEEEECCCCCEEEEEe-CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEE-EEeCCCEEEEEec
Confidence 3467999999887666554 677888877642111 111 1212234577899987666664 4445678999998
Q ss_pred C-C-ce---EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCC--ceEEEEecCCCCcceEEEecCC
Q psy5806 1119 D-G-QH---KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGS--YRTVLVEEDLAFPNELAIDFKQ 1191 (1332)
Q Consensus 1119 d-G-~~---~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~--~~~~l~~~~l~~p~glaiD~~~ 1191 (1332)
+ + .. ...+..-......|+++|...+|.-+... ..|..-++... .....+...-.....++++++.
T Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-------~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 209 (330)
T 2hes_X 137 DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-------DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTE 209 (330)
T ss_dssp CTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSS
T ss_pred cCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-------CeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCC
Confidence 4 2 21 22243333567899999965555444332 23433333222 1222232223445677787763
Q ss_pred -CEEEEEEcCCCeEEEEecCCCc-----e-EEEEe-----ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1192 -RRLFWADSTNKRIEYCDFFGRS-----R-KIVIS-----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1192 -~~LY~~d~~~~~I~~~d~dG~~-----~-~~~~~-----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
..+..+-...+.|...++.+.. . ..+.. ......++. ..++ ++.+-...+.|...+..++
T Consensus 210 ~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~------s~~~-~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 210 GVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAW------GFNG-LIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp SSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEE------CTTS-CEEEEETTSCEEEEEEETT
T ss_pred CeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEE------cCCC-EEEEEeCCCEEEEEEcCCC
Confidence 2333444556677776664321 0 11111 223456666 1233 3445456778887776655
No 367
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=92.40 E-value=0.032 Score=61.06 Aligned_cols=45 Identities=27% Similarity=0.546 Sum_probs=33.5
Q ss_pred ccccccCC--CCccee--eeccCCCceEEeCCCCceecCCCCCcCCCccce
Q psy5806 390 PNYQSHCA--PKVCSH--ICLPNKHRFTCQCPLGLTLSPDNKSCSESPEEL 436 (1332)
Q Consensus 390 p~~~n~C~--~g~Csh--lCl~~~~~~~C~C~~G~~L~~d~~tC~~~~~~~ 436 (1332)
|.+.|+|. ...|++ .|.|.+++|+|.|+.||. .||++|.+...|.
T Consensus 2 ~~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d~d~Pq 50 (285)
T 1gl4_A 2 PLAQQTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVAEGSPQ 50 (285)
T ss_dssp -----CHHHHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEEETTCEE
T ss_pred CccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCC--CCCCcCCCCCCCc
Confidence 56789998 678974 699999999999999998 5799998765543
No 368
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=92.37 E-value=0.062 Score=51.45 Aligned_cols=32 Identities=22% Similarity=0.537 Sum_probs=29.0
Q ss_pred ccccCCCCcceeeeccC-CCceEEeCCCCceec
Q psy5806 392 YQSHCAPKVCSHICLPN-KHRFTCQCPLGLTLS 423 (1332)
Q Consensus 392 ~~n~C~~g~CshlCl~~-~~~~~C~C~~G~~L~ 423 (1332)
++|+|.+..|.|.|++. +++|+|.|+.||++.
T Consensus 3 dideC~~~pC~~~C~~~~~g~y~C~C~~Gy~g~ 35 (118)
T 1dx5_I 3 PVDPCFRANCEYQCQPLDQTSYLCVCAEGFAPI 35 (118)
T ss_dssp CCCGGGGCCCSSEEEECSSSCEEEECCTTEEEE
T ss_pred ccccCCCCCCCCCCCCCCCCCEEeECCCCcccc
Confidence 46889888899999999 899999999999976
No 369
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=92.18 E-value=0.068 Score=53.08 Aligned_cols=42 Identities=14% Similarity=0.488 Sum_probs=35.0
Q ss_pred cccccCC--CCcce--eeeccCCCceEEeCCCCceecCCCCCcCCC
Q psy5806 391 NYQSHCA--PKVCS--HICLPNKHRFTCQCPLGLTLSPDNKSCSES 432 (1332)
Q Consensus 391 ~~~n~C~--~g~Cs--hlCl~~~~~~~C~C~~G~~L~~d~~tC~~~ 432 (1332)
..+++|. ...|. +.|++.+++|+|.|+.||++..++++|...
T Consensus 94 ~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~~ 139 (143)
T 2bou_A 94 QDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKD 139 (143)
T ss_dssp EECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBTT
T ss_pred CCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCccC
Confidence 3457776 46676 689999999999999999999999999764
No 370
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=92.13 E-value=6.2 Score=46.56 Aligned_cols=199 Identities=7% Similarity=-0.078 Sum_probs=114.9
Q ss_pred ceEEEEEeCCCcEEEE---EeCCCCeEEEEECCCC-----CCce---eEee-c-CCCCceeeEEEecCCeEEEEcCCCce
Q psy5806 1046 SSIFFDYHYSKNLIYF---ADMRSGNLRTFDMSDS-----TRIK---PIPL-M-NDTIRDNFVIDWVANNIYYIDSQMHT 1112 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~---sd~~~~~I~~~~l~~g-----~~~~---~i~~-~-~~~~p~glAvDw~~~~LY~td~~~~~ 1112 (1332)
.+..++|++.++.|++ +....+.|+..++.++ ...+ .+.. . ....+.+|++.+..++++.+-...+.
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 4789999999998887 5555678888876532 1100 1111 1 13467889988776777787777889
Q ss_pred EEEEeeCCceEEE-EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecC-CC-----CcceE
Q psy5806 1113 INVARSDGQHKKI-LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEED-LA-----FPNEL 1185 (1332)
Q Consensus 1113 I~v~~ldG~~~~~-~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~-l~-----~p~gl 1185 (1332)
|.++++....... ...-...+..++.+|...+|+.... . +.|...++.|.....+.... .. ....|
T Consensus 174 v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~-d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v 246 (434)
T 2oit_A 174 IAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQ-N------GTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDV 246 (434)
T ss_dssp EEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEET-T------SCEEEECTTCCEEEEECCCTTCCTTSCEEEEEE
T ss_pred EEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcC-C------CcEEEEccCCcccccccCCcccCCCCceeEEEE
Confidence 9999998553332 2222356899999997555555543 2 56888888765443332111 11 23455
Q ss_pred EEecCCCEEEEEEcCCC------eEEEEecCCCc---eEEEEe---e------cccceE---EEecCCccccccEEEEEE
Q psy5806 1186 AIDFKQRRLFWADSTNK------RIEYCDFFGRS---RKIVIS---K------VAPYGL---SVRQSPGKAFIVELYWTD 1244 (1332)
Q Consensus 1186 aiD~~~~~LY~~d~~~~------~I~~~d~dG~~---~~~~~~---~------~~P~gl---av~~~~~~~~~~~lYwtd 1244 (1332)
+.+.....|.......+ .+...++.... ...... . .++-.+ .+ ..-+.+|+++
T Consensus 247 ~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l------~dw~l~~v~s 320 (434)
T 2oit_A 247 LWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYI------EEWDLVLAAS 320 (434)
T ss_dssp EEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEE------GGGTEEEEEE
T ss_pred EEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehh------ccCCEEEEec
Confidence 55544333322333332 25566665321 112111 1 111122 22 2447899999
Q ss_pred CCCCEEEEEEecC
Q psy5806 1245 WEAMSVVIAREKS 1257 (1332)
Q Consensus 1245 ~~~~~V~~~~~~~ 1257 (1332)
..+..|..+.+..
T Consensus 321 ~~s~dv~vl~~~~ 333 (434)
T 2oit_A 321 AASTEVSILARQS 333 (434)
T ss_dssp TTCSBCEEEEECT
T ss_pred CCCCceeEEEecC
Confidence 9999888887654
No 371
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=92.08 E-value=9.7 Score=47.85 Aligned_cols=149 Identities=11% Similarity=0.063 Sum_probs=80.8
Q ss_pred CcEEEEEeCCCCeEEEEECCCCCCceeEeecCC----------CCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEE
Q psy5806 1056 KNLIYFADMRSGNLRTFDMSDSTRIKPIPLMND----------TIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKK 1124 (1332)
Q Consensus 1056 ~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~----------~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~ 1124 (1332)
+++||+... .+.|+.+++.+|......-.... ....+++++ ++.||+... .+++..++.. |+.+-
T Consensus 77 ~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~v~v~~~-dg~l~alD~~tG~~~W 152 (677)
T 1kb0_A 77 DGIMYVSAS-WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGAW-DGRLIALDAATGKEVW 152 (677)
T ss_dssp TTEEEEECG-GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEECT-TSEEEEEETTTCCEEE
T ss_pred CCEEEEECC-CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE--CCEEEEEcC-CCEEEEEECCCCCEEe
Confidence 467777653 45677777654443322211100 123578887 899999854 4678888874 77543
Q ss_pred EEecC------CCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEec-CCCceEEEEecC--C--------------CC
Q psy5806 1125 ILVND------LMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYL-DGSYRTVLVEED--L--------------AF 1181 (1332)
Q Consensus 1125 ~~~~~------~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~l-dG~~~~~l~~~~--l--------------~~ 1181 (1332)
..... .......++. .+.||+...+.. ....+.|+.++. +|+.+-.+-... . .+
T Consensus 153 ~~~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~~~-~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w 229 (677)
T 1kb0_A 153 HQNTFEGQKGSLTITGAPRVF--KGKVIIGNGGAE-YGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTW 229 (677)
T ss_dssp EEETTTTCCSSCBCCSCCEEE--TTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTS
T ss_pred eecCCcCcCcCcccccCcEEE--CCEEEEEecccc-cCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccc
Confidence 32221 0011112222 578888765320 001356777776 454433221100 0 01
Q ss_pred c---------------ceEEEecCCCEEEEEEcCC------------------CeEEEEecCC
Q psy5806 1182 P---------------NELAIDFKQRRLFWADSTN------------------KRIEYCDFFG 1211 (1332)
Q Consensus 1182 p---------------~glaiD~~~~~LY~~d~~~------------------~~I~~~d~dG 1211 (1332)
+ ..+++|++.++||+..... +.|..+|.+.
T Consensus 230 ~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~T 292 (677)
T 1kb0_A 230 DPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDT 292 (677)
T ss_dssp CGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTT
T ss_pred cccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCC
Confidence 1 3579999999999985431 2588888873
No 372
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=92.05 E-value=15 Score=46.12 Aligned_cols=67 Identities=6% Similarity=-0.080 Sum_probs=42.6
Q ss_pred eEEEecCCCEEEEEEc-----------------------------------CCCeEEEEecCCCceEEEEe-ecccc--e
Q psy5806 1184 ELAIDFKQRRLFWADS-----------------------------------TNKRIEYCDFFGRSRKIVIS-KVAPY--G 1225 (1332)
Q Consensus 1184 glaiD~~~~~LY~~d~-----------------------------------~~~~I~~~d~dG~~~~~~~~-~~~P~--g 1225 (1332)
++++|++++.+|+... ..+.|..+|+......--.. ..... .
T Consensus 385 ~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~ 464 (668)
T 1kv9_A 385 SMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGT 464 (668)
T ss_dssp CCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCE
T ss_pred cceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCce
Confidence 4899999999998421 12668888875332211112 22222 3
Q ss_pred EEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1226 LSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1226 lav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
++. .++.||+.+ ..+.|+.++..+|
T Consensus 465 ~~t-------~gg~vf~g~-~dg~l~a~d~~tG 489 (668)
T 1kv9_A 465 LST-------AGNLVFQGT-AAGQMHAYSADKG 489 (668)
T ss_dssp EEE-------TTTEEEEEC-TTSEEEEEETTTC
T ss_pred eEe-------CCCEEEEEC-CcccchhhhhhcC
Confidence 555 778888874 5688888888887
No 373
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=91.52 E-value=4.3 Score=51.83 Aligned_cols=192 Identities=13% Similarity=0.039 Sum_probs=112.0
Q ss_pred CCcEEEEEeCCCC----eEEEEECC--CCC--CceeEeecCC-----C--CceeeEEE-ecCCeEEEEcCCC----ceEE
Q psy5806 1055 SKNLIYFADMRSG----NLRTFDMS--DST--RIKPIPLMND-----T--IRDNFVID-WVANNIYYIDSQM----HTIN 1114 (1332)
Q Consensus 1055 ~~~~lY~sd~~~~----~I~~~~l~--~g~--~~~~i~~~~~-----~--~p~glAvD-w~~~~LY~td~~~----~~I~ 1114 (1332)
.++++||+-...+ .+++.+.. ++. ..++++..+. + ...+.++. +.++.|.|+.... ..|.
T Consensus 125 ~g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~ 204 (751)
T 2xe4_A 125 YGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIE 204 (751)
T ss_dssp ETTEEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEE
T ss_pred ECCEEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEE
Confidence 4678888764333 36777751 244 4455554221 1 34567888 8888777664322 3599
Q ss_pred EEeeCCc-eEEE--EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCce--EEEEec-CCCCcceEEEe
Q psy5806 1115 VARSDGQ-HKKI--LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYR--TVLVEE-DLAFPNELAID 1188 (1332)
Q Consensus 1115 v~~ldG~-~~~~--~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~--~~l~~~-~l~~p~glaiD 1188 (1332)
+.++++. .... +.. ...+++.+|....||++.... .....+|++.++++... +.++.. +-..-.++.+.
T Consensus 205 v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~--~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~S 279 (751)
T 2xe4_A 205 FKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDE--TLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKA 279 (751)
T ss_dssp EEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECT--TCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEEC
T ss_pred EEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECC--CCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEEC
Confidence 9999865 3111 211 124678888777888886432 11124799999987652 334332 11233467788
Q ss_pred cCCCEEEEEEcC--CCeEEEEecCCC--ce--EEEEe-ec-ccceEEEecCCccccccEEEEEEC----CCCEEEEEEec
Q psy5806 1189 FKQRRLFWADST--NKRIEYCDFFGR--SR--KIVIS-KV-APYGLSVRQSPGKAFIVELYWTDW----EAMSVVIAREK 1256 (1332)
Q Consensus 1189 ~~~~~LY~~d~~--~~~I~~~d~dG~--~~--~~~~~-~~-~P~glav~~~~~~~~~~~lYwtd~----~~~~V~~~~~~ 1256 (1332)
++++.|+|+... ...|+.+|+++. .. +.+.. .. .-+++.. ..+++|||.-. ....|++++..
T Consensus 280 pDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~------~~g~~l~~~t~~~~a~~~~L~~~d~~ 353 (751)
T 2xe4_A 280 ADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQM------HGTSHLVILTNEGGAVNHKLLIAPRG 353 (751)
T ss_dssp TTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEE------ETTTEEEEEECTTTCTTCEEEEEETT
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEee------eeCCEEEEEeCCCCCCCcEEEEEcCC
Confidence 899999887543 456888999864 23 33333 22 2234441 14777777643 24588888876
Q ss_pred C
Q psy5806 1257 S 1257 (1332)
Q Consensus 1257 ~ 1257 (1332)
+
T Consensus 354 ~ 354 (751)
T 2xe4_A 354 Q 354 (751)
T ss_dssp S
T ss_pred C
Confidence 4
No 374
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=91.45 E-value=20 Score=40.12 Aligned_cols=156 Identities=8% Similarity=-0.085 Sum_probs=90.7
Q ss_pred CCceeeEEEe-cCCeEEEEcCCCceEEEEeeCCceE-EEEec-CCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEe
Q psy5806 1089 TIRDNFVIDW-VANNIYYIDSQMHTINVARSDGQHK-KILVN-DLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVY 1165 (1332)
Q Consensus 1089 ~~p~glAvDw-~~~~LY~td~~~~~I~v~~ldG~~~-~~~~~-~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ 1165 (1332)
+.+..|++++ ..++++++-...+.|.++++..... ..... .......++++| .|.++.+-... +.|...+
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p-dg~~lasg~~d------g~i~iwd 198 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK-DSLLLALYSPD------GILDVYN 198 (343)
T ss_dssp SCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT-TSCEEEEECTT------SCEEEEE
T ss_pred CCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC-CCCEEEEEcCC------CEEEEEE
Confidence 3567888886 1344445555677899999974433 32322 223578999999 55555553332 5677778
Q ss_pred cCCCceE-EEEec-CCCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCce-EEEEe---eccc---ceEEEecCCcccc
Q psy5806 1166 LDGSYRT-VLVEE-DLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSR-KIVIS---KVAP---YGLSVRQSPGKAF 1236 (1332)
Q Consensus 1166 ldG~~~~-~l~~~-~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~-~~~~~---~~~P---~glav~~~~~~~~ 1236 (1332)
+...... ..+.. .-.....|++.+++..|..+. .+.|...|+..... ..+.. ...+ ..+++ ++.
T Consensus 199 ~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 271 (343)
T 3lrv_A 199 LSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC--DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDI-----DDS 271 (343)
T ss_dssp SSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE--SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEE-----CTT
T ss_pred CCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCCCcceeecccccccccccceEEEE-----CCC
Confidence 7655543 33332 235677899998888877776 34898888864432 11111 1112 23777 334
Q ss_pred ccEEEEEECCCCEEEEEEecCC
Q psy5806 1237 IVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1237 ~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
+.+|.......+.|...+...+
T Consensus 272 g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 272 GKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTT
T ss_pred CCEEEEecCCCCcEEEEEEccc
Confidence 5555554444677777766444
No 375
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=91.07 E-value=0.12 Score=44.44 Aligned_cols=39 Identities=28% Similarity=0.693 Sum_probs=29.8
Q ss_pred CCcccCCCCCCc--cccccCCCCcccc---------------------------CCCCeeEccCCcccc
Q psy5806 969 PNACGSNNGGCS--HLCLRNPTNFTCA---------------------------CPTGILLSADRRSCF 1008 (1332)
Q Consensus 969 ~n~C~~~nGgCs--hlCl~~p~~~~C~---------------------------Cp~g~~l~~d~~tC~ 1008 (1332)
.++|...+..|. +.|++++++|+|. |+.||+|. ++.+|+
T Consensus 3 idEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~~~~~~~~~~~~~~~C~~Gy~~~-~~~~C~ 70 (71)
T 2kl7_A 3 VNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGEGPPPPVPPAQHPNPCPPGYEPD-DQDSCV 70 (71)
T ss_dssp SCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCSSCCCSSCSCSSCCCSCTTEEEE-CCCCSC
T ss_pred cccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCCccccccccCccccCCCCCeeeC-CCCccc
Confidence 467776666784 5799999999999 88888876 344675
No 376
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=90.72 E-value=2.3 Score=44.94 Aligned_cols=149 Identities=11% Similarity=-0.009 Sum_probs=87.6
Q ss_pred ccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCC-----Ccee-EeecCCCCceeeEEEecCCeEEEEcCCCceEEEEe
Q psy5806 1044 YMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDST-----RIKP-IPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVAR 1117 (1332)
Q Consensus 1044 ~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~-----~~~~-i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ 1117 (1332)
..+...|+|+| ++.||.+ ..+.|++++..+.. ...+ |-..+...=..+.+| ..++||.. ..+.|.+.+
T Consensus 40 w~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD-~~G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 40 WSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFD-PNGYLYAV--SKDKLYKAS 113 (236)
T ss_dssp CTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEEC-TTSCEEEE--ETTEEEEES
T ss_pred cccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEEC-CCCCEEEe--CCCEEEEeC
Confidence 45677999999 7789999 77889999864311 1122 222233334678999 68999998 237786665
Q ss_pred e--CCce------EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecC-CC------ceEEEEecCCCCc
Q psy5806 1118 S--DGQH------KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLD-GS------YRTVLVEEDLAFP 1182 (1332)
Q Consensus 1118 l--dG~~------~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ld-G~------~~~~l~~~~l~~p 1182 (1332)
. ++.. .++-..+-..-..|+++| .|.||-.. +. +++|-..- +. ..+.+...+...=
T Consensus 114 pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~-dg-------~lyr~~~P~~~~~~wl~~~~~~g~~g~~~y 184 (236)
T 1tl2_A 114 PPQSDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH-GQ-------QFYKALPPVSNQDNWLARATKIGQGGWDTF 184 (236)
T ss_dssp CCCSTTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE-TT-------EEEEECCCSSTTCCHHHHCEEEESSSGGGE
T ss_pred CCcCCCCceeccccEeccCCCCceEEEEECC-CceEEEEe-CC-------cEEecCCCCCCCcccccccceeccCCcceE
Confidence 4 2321 222223445568999999 89999888 43 47664432 11 1222222221111
Q ss_pred ceEEEecCCCEEEEEEcCCCeEEEEecC
Q psy5806 1183 NELAIDFKQRRLFWADSTNKRIEYCDFF 1210 (1332)
Q Consensus 1183 ~glaiD~~~~~LY~~d~~~~~I~~~d~d 1210 (1332)
.-|.++ .++.||++. +++|.+...+
T Consensus 185 r~l~f~-~~G~l~~v~--~g~~Y~~~~p 209 (236)
T 1tl2_A 185 KFLFFS-SVGTLFGVQ--GGKFYEDYPP 209 (236)
T ss_dssp EEEEEC-TTSCEEEEE--TTEEEEESCC
T ss_pred EEEEEC-CCCcEEEEe--CCeEEecCCc
Confidence 123444 456677776 6677776443
No 377
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=90.66 E-value=0.18 Score=40.50 Aligned_cols=31 Identities=23% Similarity=0.772 Sum_probs=23.2
Q ss_pred ccCCCCcceeeec--cCCCceEEeCCCCceecCCCCCcCC
Q psy5806 394 SHCAPKVCSHICL--PNKHRFTCQCPLGLTLSPDNKSCSE 431 (1332)
Q Consensus 394 n~C~~g~CshlCl--~~~~~~~C~C~~G~~L~~d~~tC~~ 431 (1332)
+||.||+ .|+ +..++|+|.||.||+ |..|..
T Consensus 12 ~pC~ngg---~C~~~~~~~~~~C~C~~G~~----G~~Ce~ 44 (53)
T 1egf_A 12 GYCLNGG---VCMHIESLDSYTCNCVIGYS----GDRCQT 44 (53)
T ss_dssp CSSCSSC---EEEEESSSSCEEEECCTTCC----SSSSCC
T ss_pred CcCCCCc---EEEeeCCCCCEEEECCCCCc----CCcCCc
Confidence 4666533 566 678899999999996 668864
No 378
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=89.96 E-value=41 Score=42.16 Aligned_cols=56 Identities=9% Similarity=-0.155 Sum_probs=31.8
Q ss_pred CeEEEEecC-CCceEEEEeecccc--eEEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEe
Q psy5806 1202 KRIEYCDFF-GRSRKIVISKVAPY--GLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIR 1268 (1332)
Q Consensus 1202 ~~I~~~d~d-G~~~~~~~~~~~P~--glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~ 1268 (1332)
+.|..+|+. |+.+-.+-...... .++. .++.||... ..+.|+.+|..+| +......
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-------agglvf~gt-~dg~l~a~D~~tG---~~lw~~~ 513 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLST-------AGNLVFEGS-ADGRVIAYAADTG---EKLWEQP 513 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEE-------TTTEEEEEC-TTSEEEEEETTTC---CEEEEEE
T ss_pred eeEEEEECCCCCeEeEccCCCCccCccceE-------CCCEEEEEC-CCCcEEEEECCCC---ccceeee
Confidence 568888885 33222211111111 3344 677777774 5788888888888 5544443
No 379
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=89.94 E-value=30 Score=39.24 Aligned_cols=175 Identities=8% Similarity=-0.053 Sum_probs=99.1
Q ss_pred CceeeEEEecCCeEEEEcC-CCceEEEEeeCCce-EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecC
Q psy5806 1090 IRDNFVIDWVANNIYYIDS-QMHTINVARSDGQH-KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLD 1167 (1332)
Q Consensus 1090 ~p~glAvDw~~~~LY~td~-~~~~I~v~~ldG~~-~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ld 1167 (1332)
.+..+|+.+.++.|.++.. ..+.|.++++.... ...+. ......+|+++|...+|..+. . ..+.+....
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s-~-------~~~~~~~~~ 205 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYIT-G-------SSLEVISTV 205 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEEC-S-------SCEEEEETT
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecc-c-------eeEEEEEec
Confidence 3567899988998887654 46789999997443 33353 335689999999655554443 2 235666554
Q ss_pred CCceEE-EEec-CCCCcceEEEecCCCEEEEEEcCCC---eEEEEecCCCceEEEE-----e-ecccceEEEecCCcccc
Q psy5806 1168 GSYRTV-LVEE-DLAFPNELAIDFKQRRLFWADSTNK---RIEYCDFFGRSRKIVI-----S-KVAPYGLSVRQSPGKAF 1236 (1332)
Q Consensus 1168 G~~~~~-l~~~-~l~~p~glaiD~~~~~LY~~d~~~~---~I~~~d~dG~~~~~~~-----~-~~~P~glav~~~~~~~~ 1236 (1332)
-..... .... .-.....+++.++++.|..+-.... .|...+........+. . .....+|++ +++
T Consensus 206 ~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-----Spd 280 (365)
T 4h5i_A 206 TGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDV-----DMK 280 (365)
T ss_dssp TCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEE-----CTT
T ss_pred cCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEE-----CCC
Confidence 333222 2111 1123457888888777776644322 3555555443322221 1 334567788 334
Q ss_pred ccEEEEEECCCCEEEEEEecCCCCcceEEEEecC-CCCeeeEEEEeCC
Q psy5806 1237 IVELYWTDWEAMSVVIAREKSDTGQWDVHLIRSN-QEDFLNIKAISAS 1283 (1332)
Q Consensus 1237 ~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~~-~~~~~~i~~~~~~ 1283 (1332)
+.+|. +-...+.|...|..++ +....+..+ ...+..| +|++.
T Consensus 281 g~~la-sgs~D~~V~iwd~~~~---~~~~~~~~gH~~~V~~v-~fSpd 323 (365)
T 4h5i_A 281 GELAV-LASNDNSIALVKLKDL---SMSKIFKQAHSFAITEV-TISPD 323 (365)
T ss_dssp SCEEE-EEETTSCEEEEETTTT---EEEEEETTSSSSCEEEE-EECTT
T ss_pred CCceE-EEcCCCEEEEEECCCC---cEEEEecCcccCCEEEE-EECCC
Confidence 44444 4456788999998887 554444332 2333333 45543
No 380
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=89.87 E-value=28 Score=38.74 Aligned_cols=195 Identities=9% Similarity=-0.057 Sum_probs=103.3
Q ss_pred eEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCcee-Eeec--CCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCc--
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKP-IPLM--NDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQ-- 1121 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~-i~~~--~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~-- 1121 (1332)
+.++++++. +..+-...+.|+..++..+..... .+.. .......|++.+.++.|. +-...+.|.++++...
T Consensus 17 v~~~~~s~~---~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~la-s~s~D~~v~iw~~~~~~~ 92 (330)
T 2hes_X 17 IWSFDFSQG---ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLA-AGSFDSTVSIWAKEESAD 92 (330)
T ss_dssp EEEEEEETT---EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEE-EEETTSCEEEEEC-----
T ss_pred eeeeccCCC---EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEE-EEeCCCcEEEEEcccCcC
Confidence 567888765 444545778898888764322211 1211 233567899987666554 4445678999988531
Q ss_pred ------eEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecC--CCceEE--EEecCCCCcceEEEecCC
Q psy5806 1122 ------HKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLD--GSYRTV--LVEEDLAFPNELAIDFKQ 1191 (1332)
Q Consensus 1122 ------~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ld--G~~~~~--l~~~~l~~p~glaiD~~~ 1191 (1332)
....+..-......|+++|...+| .+-... ..|..-+++ +..... .+...-.....+++.+++
T Consensus 93 ~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l-as~s~D------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 165 (330)
T 2hes_X 93 RTFEMDLLAIIEGHENEVKGVAWSNDGYYL-ATCSRD------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSE 165 (330)
T ss_dssp --CCCEEEEEEC----CEEEEEECTTSCEE-EEEETT------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSS
T ss_pred ccccceeEEEEcCCCCcEEEEEECCCCCEE-EEEeCC------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCC
Confidence 122233333567899999954444 443332 456666663 222121 222223456678888876
Q ss_pred CEEEEEEcCCCeEEEEecCCCceEEEEe----ecccceEEEecCCccccccEEEEEECCCCEEEEEEecC
Q psy5806 1192 RRLFWADSTNKRIEYCDFFGRSRKIVIS----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKS 1257 (1332)
Q Consensus 1192 ~~LY~~d~~~~~I~~~d~dG~~~~~~~~----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~ 1257 (1332)
+.|.-+ ...+.|...+......+.+.. .....++++ +++ .++.+..+-...+.|...+..+
T Consensus 166 ~~l~s~-s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~--~~~--~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 166 ALLASS-SYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDF--DKT--EGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp SEEEEE-ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE--CCS--SSSCEEEEEETTSCEEEEEEEE
T ss_pred CEEEEE-cCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEe--cCC--CCeeEEEEEeCCCeEEEEEecC
Confidence 655544 456777777665432222221 334456666 111 0133444555666776666543
No 381
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=89.85 E-value=7.3 Score=45.97 Aligned_cols=160 Identities=8% Similarity=-0.020 Sum_probs=96.9
Q ss_pred EEEEEeCCCcEEEEEeCCCCeEEEEECCC-------CCCceeEe-------ecCCCCceeeEEEecCCeEEE---EcCCC
Q psy5806 1048 IFFDYHYSKNLIYFADMRSGNLRTFDMSD-------STRIKPIP-------LMNDTIRDNFVIDWVANNIYY---IDSQM 1110 (1332)
Q Consensus 1048 ~~id~d~~~~~lY~sd~~~~~I~~~~l~~-------g~~~~~i~-------~~~~~~p~glAvDw~~~~LY~---td~~~ 1110 (1332)
..|++.+..+.|+.+.... |..+...+ +.....+. ......+..|+++..++.|++ +....
T Consensus 40 n~lavs~~~~~l~~~~~dg--v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d 117 (434)
T 2oit_A 40 SLLAVSNKYGLVFAGGASG--LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYG 117 (434)
T ss_dssp BCEEEETTTTEEEEEETTE--EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTE
T ss_pred cEEEEecCCCEEEEECCCE--EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCC
Confidence 4566788888888876432 44433110 00000111 011235788999988888887 66667
Q ss_pred ceEEEEeeCCc------eE-----EE-EecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecC
Q psy5806 1111 HTINVARSDGQ------HK-----KI-LVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEED 1178 (1332)
Q Consensus 1111 ~~I~v~~ldG~------~~-----~~-~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~ 1178 (1332)
+.|.++++... .. .. +..-...+.+|+.+|..+.++.+-... +.|...++............
T Consensus 118 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D------g~v~iwD~~~~~~~~~~~~~ 191 (434)
T 2oit_A 118 SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD------GSIAVLQVTETVKVCATLPS 191 (434)
T ss_dssp EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT------SCEEEEEESSSEEEEEEECG
T ss_pred ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC------CeEEEEEcCCCcceeeccCC
Confidence 88999998632 11 11 211134689999999767777765443 45777777654322212211
Q ss_pred CCCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEE
Q psy5806 1179 LAFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKI 1216 (1332)
Q Consensus 1179 l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~ 1216 (1332)
-..+..+++.++++.|+.+. ..+.|...|..|.....
T Consensus 192 ~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~~~~~~~ 228 (434)
T 2oit_A 192 TVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPTLQEKKV 228 (434)
T ss_dssp GGCEEEEEECTTSSCEEEEE-TTSCEEEECTTCCEEEE
T ss_pred CCceeEEEEcCCCCEEEEEc-CCCcEEEEccCCccccc
Confidence 24578899999988888775 66789999988654433
No 382
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=89.55 E-value=0.28 Score=37.83 Aligned_cols=30 Identities=20% Similarity=0.669 Sum_probs=22.4
Q ss_pred ccCCCCcceeeec--cCCCceEEeCCCCceecCCCCCcC
Q psy5806 394 SHCAPKVCSHICL--PNKHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 394 n~C~~g~CshlCl--~~~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
+||.|++ .|+ +..++|+|.|+.||+ |+.|.
T Consensus 9 ~pC~ngg---~C~~~~~~~~~~C~C~~G~~----G~~Ce 40 (45)
T 1a3p_A 9 GYCLNGG---VXMHIESLDSYTCNCVIGYS----GDRCQ 40 (45)
T ss_dssp SCCSSSC---EEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred CCCCCCC---EEEeecCCCCEEEEcCCCCc----CCcCC
Confidence 4777643 454 567799999999997 66784
No 383
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=89.53 E-value=27 Score=38.11 Aligned_cols=203 Identities=7% Similarity=-0.005 Sum_probs=114.2
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCce-eEeecCCCCceeeEEEec-CCeEEEEcCCCceEEEEeeCCce-
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIK-PIPLMNDTIRDNFVIDWV-ANNIYYIDSQMHTINVARSDGQH- 1122 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~-~i~~~~~~~p~glAvDw~-~~~LY~td~~~~~I~v~~ldG~~- 1122 (1332)
.+..++|++.+++|.-.. ..+.|+..++.+++... ..+....+....+++... .+++.++-...+.|.+.++....
T Consensus 11 ~V~~~~~s~~g~~las~s-~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~ 89 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCS-SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRW 89 (297)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCB
T ss_pred ceEEEEECCCCCEEEEEe-CCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCce
Confidence 357889999887766554 67888888876332221 122122334566776532 25555666667899999997431
Q ss_pred --EEEEecCCCCceEEEEcCCC-cEEEEEecCCCCCCCCCcEEEEecCCCc--eEEEEecCCCCcceEEEecCC------
Q psy5806 1123 --KKILVNDLMEPLAIAVYPRR-GLLFYSHWGLYDNSPTTKIEKVYLDGSY--RTVLVEEDLAFPNELAIDFKQ------ 1191 (1332)
Q Consensus 1123 --~~~~~~~~~~P~~iavdp~~-g~Lywtd~~~~~~~~~~~I~r~~ldG~~--~~~l~~~~l~~p~glaiD~~~------ 1191 (1332)
...+..-......++++|.. |.++.+-... +.|...++.... ....+.......+.+++.+..
T Consensus 90 ~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d------~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 90 SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp CCCEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------
T ss_pred EEEEEeecCCCceeEEEeCcCCCCcEEEEEECC------CcEEEEEecCCCceeeeeeecccCccceEeecCCccccccc
Confidence 22232233467889999952 5444444332 456666665432 122232222344566666542
Q ss_pred ------CEEEEEEcCCCeEEEEecCCCc-eEEEE-e----ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1192 ------RRLFWADSTNKRIEYCDFFGRS-RKIVI-S----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1192 ------~~LY~~d~~~~~I~~~d~dG~~-~~~~~-~----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
++++.+-...+.|...|+.... ...+. . .....+|++ +++.. .+.+..+-...++|...+..++
T Consensus 164 ~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~--sp~~~-~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW--SPTVL-LRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE--CCCCS-SSEEEEEEETTSCEEEEEESST
T ss_pred CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEE--CCCCC-CceEEEEEECCCcEEEEEeCCC
Confidence 3455555667788888876433 11121 1 334567777 22110 1355556667788888887654
No 384
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=89.51 E-value=0.23 Score=40.21 Aligned_cols=34 Identities=29% Similarity=0.778 Sum_probs=22.6
Q ss_pred cccCCCC-cceeee-ccCCCceEEeCCCCceecCCCCCcC
Q psy5806 393 QSHCAPK-VCSHIC-LPNKHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 393 ~n~C~~g-~CshlC-l~~~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
.+||.|| .|..+= +...++|+|.||.||+ |+.|+
T Consensus 13 s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE 48 (55)
T 3u7u_G 13 KTFCVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQ 48 (55)
T ss_dssp TTTSCTTCEEEEECCC--CCCEEEEECTTEE----STTSC
T ss_pred CCCCCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcC
Confidence 4667753 454331 4566799999999997 67885
No 385
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=89.51 E-value=27 Score=38.10 Aligned_cols=191 Identities=8% Similarity=-0.030 Sum_probs=102.4
Q ss_pred eEEEEeecceEEEEeCCCCCCCCcccccCCc-cceEEEEEeCC-CcEEEEEeCCCCeEEEEECCCCCCceeE-eecCCCC
Q psy5806 1014 FLLYTSRFGVIRRISLDTADLLPVTLPFPEY-MSSIFFDYHYS-KNLIYFADMRSGNLRTFDMSDSTRIKPI-PLMNDTI 1090 (1332)
Q Consensus 1014 ~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~-~~~~~id~d~~-~~~lY~sd~~~~~I~~~~l~~g~~~~~i-~~~~~~~ 1090 (1332)
+|+....+..|+..++..... ..+..+.+. ..+.+++|.+. .+.++.+-...++|+..++.++...... .......
T Consensus 23 ~las~s~D~~v~iw~~~~~~~-~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~ 101 (297)
T 2pm7_B 23 RMATCSSDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSAS 101 (297)
T ss_dssp EEEEEETTSCEEEEEBCSSCB-CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSC
T ss_pred EEEEEeCCCEEEEEecCCCCc-EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCc
Confidence 444444333266656543211 111222222 34568999753 3445555557889998888754322222 2122335
Q ss_pred ceeeEEEecC-CeEEEEcCCCceEEEEeeCCce---EEEEecCCCCceEEEEcCCC------------cEEEEEecCCCC
Q psy5806 1091 RDNFVIDWVA-NNIYYIDSQMHTINVARSDGQH---KKILVNDLMEPLAIAVYPRR------------GLLFYSHWGLYD 1154 (1332)
Q Consensus 1091 p~glAvDw~~-~~LY~td~~~~~I~v~~ldG~~---~~~~~~~~~~P~~iavdp~~------------g~Lywtd~~~~~ 1154 (1332)
...+++.+.. +.+.++-...+.|.+.++.... ...+..-......++++|.. +.++.+-...
T Consensus 102 v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D-- 179 (297)
T 2pm7_B 102 VNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-- 179 (297)
T ss_dssp EEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETT--
T ss_pred eeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCC--
Confidence 6778887652 3444555556789999986431 22233333456788888852 3455554333
Q ss_pred CCCCCcEEEEecCCCc-eEE---EEecCCCCcceEEEecCC--CEEEEEEcCCCeEEEEecCC
Q psy5806 1155 NSPTTKIEKVYLDGSY-RTV---LVEEDLAFPNELAIDFKQ--RRLFWADSTNKRIEYCDFFG 1211 (1332)
Q Consensus 1155 ~~~~~~I~r~~ldG~~-~~~---l~~~~l~~p~glaiD~~~--~~LY~~d~~~~~I~~~d~dG 1211 (1332)
..|..-++.... ... .+...-.....+++.++. +.+..+-+..+.|...|++.
T Consensus 180 ----~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 180 ----NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp ----SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred ----CcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 344444444322 111 122222446788888764 46666666777888888764
No 386
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=89.03 E-value=5.4 Score=48.86 Aligned_cols=114 Identities=16% Similarity=0.091 Sum_probs=70.6
Q ss_pred CCCceeeEEEecCCeEEEEcCCC---------------------ceEEEEeeCCce------E-EE-Ee-----------
Q psy5806 1088 DTIRDNFVIDWVANNIYYIDSQM---------------------HTINVARSDGQH------K-KI-LV----------- 1127 (1332)
Q Consensus 1088 ~~~p~glAvDw~~~~LY~td~~~---------------------~~I~v~~ldG~~------~-~~-~~----------- 1127 (1332)
...|+|+++++..+.||++-.++ +.|..++.++.. . .+ +.
T Consensus 383 f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~ 462 (592)
T 3zwu_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred EeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccccc
Confidence 45899999999999999985532 456666654321 0 11 11
Q ss_pred ----------cCCCCceEEEEcCCCcEEEEEecCCCCC------CCCCcEEEEecC-CCceEEEEecCCCCcceEEEecC
Q psy5806 1128 ----------NDLMEPLAIAVYPRRGLLFYSHWGLYDN------SPTTKIEKVYLD-GSYRTVLVEEDLAFPNELAIDFK 1190 (1332)
Q Consensus 1128 ----------~~~~~P~~iavdp~~g~Lywtd~~~~~~------~~~~~I~r~~ld-G~~~~~l~~~~l~~p~glaiD~~ 1190 (1332)
..+..|-.|++|| .|.||+.+.+...+ .....+...... |..+..+....-....|+++.++
T Consensus 463 ~~~~~~~~~~~~f~~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspD 541 (592)
T 3zwu_A 463 KGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPD 541 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTT
T ss_pred cccccccCCCCCccCCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCC
Confidence 1367899999999 68888887554110 112345555544 33333232222245678999999
Q ss_pred CCEEEEEEcCCC
Q psy5806 1191 QRRLFWADSTNK 1202 (1332)
Q Consensus 1191 ~~~LY~~d~~~~ 1202 (1332)
++.||+.-++-+
T Consensus 542 g~tlfvniQHPG 553 (592)
T 3zwu_A 542 QKTLFVGIQHPG 553 (592)
T ss_dssp SSEEEEEEESTT
T ss_pred CCEEEEEEECCC
Confidence 899998766543
No 387
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=88.70 E-value=0.12 Score=42.76 Aligned_cols=25 Identities=16% Similarity=0.562 Sum_probs=19.8
Q ss_pred eeccCCCceEEeCCCCceecCCCCCcCC
Q psy5806 404 ICLPNKHRFTCQCPLGLTLSPDNKSCSE 431 (1332)
Q Consensus 404 lCl~~~~~~~C~C~~G~~L~~d~~tC~~ 431 (1332)
.|++..++|+|.||.||.+ |..|..
T Consensus 26 tC~~~~g~y~C~C~~Gy~~---G~~C~~ 50 (61)
T 2k2s_B 26 TCKETNSGYICRCNQGYRI---SLDGTG 50 (61)
T ss_dssp EEEECSSEEEEECCTTEEE---EECSSS
T ss_pred ccccCCCceEeECCCCCcc---CCCCCC
Confidence 5788899999999999983 345643
No 388
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=88.33 E-value=13 Score=41.21 Aligned_cols=203 Identities=10% Similarity=-0.063 Sum_probs=108.0
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCcee-EeecCCCCceeeEEEec-CCeEEEEcCCCceEEEEeeCCc-e
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKP-IPLMNDTIRDNFVIDWV-ANNIYYIDSQMHTINVARSDGQ-H 1122 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~-i~~~~~~~p~glAvDw~-~~~LY~td~~~~~I~v~~ldG~-~ 1122 (1332)
.+..++|++.+++|.-.. ..+.|+..++.++..... .+....+....+++... .+++.++-...+.|.++++... .
T Consensus 15 ~V~~v~~s~~g~~lasgs-~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCS-SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTW 93 (316)
T ss_dssp CEEEEEECGGGCEEEEEE-TTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCC
T ss_pred eEEEeeEcCCCCEEEEEe-CCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcc
Confidence 357889998877665544 778888888764322111 12222345667777532 2444456556778999998743 2
Q ss_pred E--EEEecCCCCceEEEEcCCC-cEEEEEecCCCCCCCCCcEEEEecCCCceEEEEec---CCCCcceEEEecCC-----
Q psy5806 1123 K--KILVNDLMEPLAIAVYPRR-GLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEE---DLAFPNELAIDFKQ----- 1191 (1332)
Q Consensus 1123 ~--~~~~~~~~~P~~iavdp~~-g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~---~l~~p~glaiD~~~----- 1191 (1332)
. ..+..-......|+++|.. |.++.+-... +.|..-++.+.....+... .....+.+++.++.
T Consensus 94 ~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D------~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 94 EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD------GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CEEEEECCCSSCCCEEEECCTTTCSCEEEECSS------SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred eEEEEccCCCCceEEEEECCCCCCcEEEEEcCC------CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 2 2233333467899999963 5555554333 4455555554322111110 11122344444431
Q ss_pred -----------CEEEEEEcCCCeEEEEecCCCc-eEEEEe----ecccceEEEecCCccccccEEEEEECCCCEEEEEEe
Q psy5806 1192 -----------RRLFWADSTNKRIEYCDFFGRS-RKIVIS----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIARE 1255 (1332)
Q Consensus 1192 -----------~~LY~~d~~~~~I~~~d~dG~~-~~~~~~----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~ 1255 (1332)
++++.+-...+.|...|+.+.. .+.+.. .....++++ +++...++.+..+-...++|...+.
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~--sp~~~~~~~~las~s~D~~v~iw~~ 245 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAW--APSIGLPTSTIASCSQDGRVFIWTC 245 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEEC--CCCSSCSCCEEEEEETTCEEEEEEC
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEe--cCCCCCCCceEEEEcCCCeEEEEEc
Confidence 2344444456667666665332 122222 233456666 3322222345566667788888887
Q ss_pred cC
Q psy5806 1256 KS 1257 (1332)
Q Consensus 1256 ~~ 1257 (1332)
.+
T Consensus 246 ~~ 247 (316)
T 3bg1_A 246 DD 247 (316)
T ss_dssp SS
T ss_pred cC
Confidence 65
No 389
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=88.03 E-value=38 Score=37.90 Aligned_cols=200 Identities=12% Similarity=0.002 Sum_probs=113.1
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeE--eecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCce-
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPI--PLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQH- 1122 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i--~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~- 1122 (1332)
.+.+++|++.++.|.-.. ..+.|+..++..+...+.+ ..........+++.+.++.|..+ ...+.|.++++....
T Consensus 107 ~v~~v~~sp~~~~l~s~s-~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~-s~d~~i~~w~~~~~~~ 184 (345)
T 3fm0_A 107 EVKSVAWAPSGNLLATCS-RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA-SYDDTVKLYREEEDDW 184 (345)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEE-ETTSCEEEEEEETTEE
T ss_pred CceEEEEeCCCCEEEEEE-CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEE-eCCCcEEEEEecCCCE
Confidence 467899999887666554 6788888887744333222 22223456788888766666544 455688889887543
Q ss_pred E--EEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceE-----------EE--Eec-CCCCcceEE
Q psy5806 1123 K--KILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRT-----------VL--VEE-DLAFPNELA 1186 (1332)
Q Consensus 1123 ~--~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~-----------~l--~~~-~l~~p~gla 1186 (1332)
. ..+..-.....+|+++|...+|....... .=+|++....+.... .+ +.. .-.....++
T Consensus 185 ~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~-----~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 259 (345)
T 3fm0_A 185 VCCATLEGHESTVWSLAFDPSGQRLASCSDDR-----TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIA 259 (345)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEE
T ss_pred EEEEEecCCCCceEEEEECCCCCEEEEEeCCC-----eEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEE
Confidence 2 22433345678999999655554443322 345666554433211 11 110 112345677
Q ss_pred EecCCCEEEEEEcCCCeEEEEecCCCc------eEEEEe-----ecccceEEEecCCccccccEEEEEECCCCEEEEEEe
Q psy5806 1187 IDFKQRRLFWADSTNKRIEYCDFFGRS------RKIVIS-----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIARE 1255 (1332)
Q Consensus 1187 iD~~~~~LY~~d~~~~~I~~~d~dG~~------~~~~~~-----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~ 1255 (1332)
+.+.++.|.-+ ...+.|...+.+... ...... .....+|+. .+.+..+..+-...++|..-+.
T Consensus 260 ~~~~~~~l~s~-~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~-----~p~~~~~laS~s~Dg~v~~W~~ 333 (345)
T 3fm0_A 260 WCQLTGALATA-CGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAW-----NPKEPGLLASCSDDGEVAFWKY 333 (345)
T ss_dssp ECTTTCCEEEE-ETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEE-----CSSSTTEEEEEETTSCEEEEEE
T ss_pred EecCCCEEEEE-eCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEE-----eCCCceEEEEcCCCCcEEEEEe
Confidence 77776666544 456677777775431 111111 233456666 1223345666667778877776
Q ss_pred cCC
Q psy5806 1256 KSD 1258 (1332)
Q Consensus 1256 ~~g 1258 (1332)
.++
T Consensus 334 ~~~ 336 (345)
T 3fm0_A 334 QRP 336 (345)
T ss_dssp CC-
T ss_pred cCC
Confidence 654
No 390
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=88.00 E-value=0.31 Score=39.16 Aligned_cols=32 Identities=22% Similarity=0.746 Sum_probs=23.3
Q ss_pred cccCCCC-cceeeeccCCCceEEeCCCCceecCCCCCcC
Q psy5806 393 QSHCAPK-VCSHICLPNKHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 393 ~n~C~~g-~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
.+||.|| .|.. +...++|+|.||.||+ |..|+
T Consensus 11 ~~pC~nGG~C~~--~~~~~~~~C~C~~Gyt----G~~Ce 43 (53)
T 1nql_B 11 DGYCLHDGVCMY--IEALDKYACNCVVGYI----GERCQ 43 (53)
T ss_dssp CCEECTTCEEEE--ETTTTEEEEEECTTEE----STTSC
T ss_pred CCCCCCCeEEee--ecCCCCEEEecCCCCc----CCCCC
Confidence 5788864 4532 1556799999999997 66785
No 391
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=87.68 E-value=24 Score=37.35 Aligned_cols=147 Identities=9% Similarity=-0.044 Sum_probs=86.3
Q ss_pred CCCCceeeEEEecCCeEEEEcCCCceEEEEeeCC-------ceEEEEe-cCCCCceEEEEcCCCcEEEEEecCCCCCCCC
Q psy5806 1087 NDTIRDNFVIDWVANNIYYIDSQMHTINVARSDG-------QHKKILV-NDLMEPLAIAVYPRRGLLFYSHWGLYDNSPT 1158 (1332)
Q Consensus 1087 ~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG-------~~~~~~~-~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~ 1158 (1332)
+..+...||+++ ++.||.. ..+.+...+... ...+.|- .+...=.+|.+|| +|.||....
T Consensus 39 gw~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav~d-------- 106 (236)
T 1tl2_A 39 GWSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAVSK-------- 106 (236)
T ss_dssp SCTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEEET--------
T ss_pred ccccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEeCC--------
Confidence 456788999998 8889998 445676665521 1112231 2333357899998 899999932
Q ss_pred CcEEEEec--CCCce-----EEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEe-cCCC------ceEEEEe-eccc
Q psy5806 1159 TKIEKVYL--DGSYR-----TVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCD-FFGR------SRKIVIS-KVAP 1223 (1332)
Q Consensus 1159 ~~I~r~~l--dG~~~-----~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d-~dG~------~~~~~~~-~~~P 1223 (1332)
++|+|.+. ++... +.+...+...-.-|.+|++ +.||-+. .+++.+-. +.+. ....+.. ..+-
T Consensus 107 G~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~-G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~ 183 (236)
T 1tl2_A 107 DKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPN-GYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDT 183 (236)
T ss_dssp TEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTT-SCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGG
T ss_pred CEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCC-ceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcce
Confidence 47999987 44331 2333323333456788854 6788766 55665432 2222 1233332 2222
Q ss_pred ce-EEEecCCccccccEEEEEECCCCEEEEEEec
Q psy5806 1224 YG-LSVRQSPGKAFIVELYWTDWEAMSVVIAREK 1256 (1332)
Q Consensus 1224 ~g-lav~~~~~~~~~~~lYwtd~~~~~V~~~~~~ 1256 (1332)
+- |.. +.++.||+.. .+.+++....
T Consensus 184 yr~l~f------~~~G~l~~v~--~g~~Y~~~~p 209 (236)
T 1tl2_A 184 FKFLFF------SSVGTLFGVQ--GGKFYEDYPP 209 (236)
T ss_dssp EEEEEE------CTTSCEEEEE--TTEEEEESCC
T ss_pred EEEEEE------CCCCcEEEEe--CCeEEecCCc
Confidence 22 223 3677888888 7788887544
No 392
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=87.58 E-value=17 Score=41.96 Aligned_cols=210 Identities=10% Similarity=0.036 Sum_probs=110.4
Q ss_pred eEEEEEeCC--CcEEEEEeCCCCeEEEEECCCCCCceeEeecC-------------------CCCceeeEEEec-CCeEE
Q psy5806 1047 SIFFDYHYS--KNLIYFADMRSGNLRTFDMSDSTRIKPIPLMN-------------------DTIRDNFVIDWV-ANNIY 1104 (1332)
Q Consensus 1047 ~~~id~d~~--~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~-------------------~~~p~glAvDw~-~~~LY 1104 (1332)
+.+|++++. .+.||... ..+.|++.+ + +...-..+... ......|++|+. .+.||
T Consensus 117 i~~l~~~~~~~~~~l~~g~-~~ggl~~S~-D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~ 193 (394)
T 3b7f_A 117 VFWLTPGHASEPGTWYAGT-SPQGLFRST-D-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLY 193 (394)
T ss_dssp EEEEEECCTTSTTCEEEEE-ETTEEEEES-S-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEE
T ss_pred eeEEEeCCCCCCCEEEEEe-cCCcEEEEc-C-CCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEE
Confidence 456777763 46677654 345577654 3 33332222110 112357888864 46788
Q ss_pred EEcCCCceEEEEeeCCceEEEEecCC-------------CCceEEEEcCCC-cEEEEEecCCCCCCCCCcEEEEecCCCc
Q psy5806 1105 YIDSQMHTINVARSDGQHKKILVNDL-------------MEPLAIAVYPRR-GLLFYSHWGLYDNSPTTKIEKVYLDGSY 1170 (1332)
Q Consensus 1105 ~td~~~~~I~v~~ldG~~~~~~~~~~-------------~~P~~iavdp~~-g~Lywtd~~~~~~~~~~~I~r~~ldG~~ 1170 (1332)
+.... +.|.+.+-.|+.=+.+..++ ..+..|+++|.+ +.||....+ .|+|..-.|..
T Consensus 194 vg~~~-ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~--------gl~~s~D~G~t 264 (394)
T 3b7f_A 194 IGMSS-GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHC--------GIYRMDRREGV 264 (394)
T ss_dssp EEEET-BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETT--------EEEEEETTTTE
T ss_pred EEECC-CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCC--------eEEEeCCCCCc
Confidence 87543 34544443454433322111 236789999964 678776533 38888755544
Q ss_pred eEEEEecCCCC-----cceEEEec-CCCEEEEEEc------------CCCeEEEEecCCCceEEEEe-ecc--------c
Q psy5806 1171 RTVLVEEDLAF-----PNELAIDF-KQRRLFWADS------------TNKRIEYCDFFGRSRKIVIS-KVA--------P 1223 (1332)
Q Consensus 1171 ~~~l~~~~l~~-----p~glaiD~-~~~~LY~~d~------------~~~~I~~~d~dG~~~~~~~~-~~~--------P 1223 (1332)
-+.+ ...+.. ...|++|+ +.+.||++-. ....|.+..-.|..-+.+.. +.. .
T Consensus 265 W~~~-~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~ 343 (394)
T 3b7f_A 265 WKRI-GDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKR 343 (394)
T ss_dssp EECG-GGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCT
T ss_pred ceEC-CCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEE
Confidence 3332 222322 23577776 4567887631 12356654333555554433 221 1
Q ss_pred ceEEEecCCcccc-ccEEEEEECCCCEEEEEEecCCCCcceEEEEecCCCCeeeEEE
Q psy5806 1224 YGLSVRQSPGKAF-IVELYWTDWEAMSVVIAREKSDTGQWDVHLIRSNQEDFLNIKA 1279 (1332)
Q Consensus 1224 ~glav~~~~~~~~-~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~~~~~~~~i~~ 1279 (1332)
.+|++ ++. .+.||+.. ..+.|++-. ..| ..-+.+..+++....|.+
T Consensus 344 ~~~~~-----~p~~~~~l~~g~-~~g~l~~S~-D~G---~tW~~~~~~lp~~~~v~~ 390 (394)
T 3b7f_A 344 QAMTA-----DAHAPVGVYFGT-TGGEIWASA-DEG---EHWQCIASHLPHIYAVQS 390 (394)
T ss_dssp BSEEE-----CCSSSCCEEEEC-TTSCEEEES-STT---SBCEEEECSCSCEEEEEE
T ss_pred EEEEE-----CCCCCCEEEEEe-CCCeEEEEC-CCC---CCceEcccCCCCeeEEEE
Confidence 35777 222 35588763 345676654 344 455666777776665543
No 393
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=87.14 E-value=0.29 Score=55.55 Aligned_cols=42 Identities=33% Similarity=0.936 Sum_probs=36.9
Q ss_pred CCcccCC-CCCCccccccCCCCccccCCCCeeEccCCcccccc
Q psy5806 969 PNACGSN-NGGCSHLCLRNPTNFTCACPTGILLSADRRSCFSR 1010 (1332)
Q Consensus 969 ~n~C~~~-nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~ 1010 (1332)
.++|... ++.|.|.|.+++++|+|.|+.||.+..++++|.+.
T Consensus 43 ~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~ 85 (317)
T 3h5c_B 43 KNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPH 85 (317)
T ss_dssp SSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTSSCCEEC
T ss_pred cccCCCCCCCCCcCccccCCCeeEEeccccccccccccccccc
Confidence 6788763 47999999999999999999999998899999863
No 394
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=87.06 E-value=58 Score=39.58 Aligned_cols=157 Identities=8% Similarity=-0.018 Sum_probs=99.7
Q ss_pred ccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCC----CCceeeEEEecCCeEEEEcCCCceEEEEeeC
Q psy5806 1044 YMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMND----TIRDNFVIDWVANNIYYIDSQMHTINVARSD 1119 (1332)
Q Consensus 1044 ~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~----~~p~glAvDw~~~~LY~td~~~~~I~v~~ld 1119 (1332)
...+.+++|+|.+.+|-.+. .++.++..+.+ .......... .....+|+.+.++.|+.+.. .+.|.++++.
T Consensus 85 ~~~V~~vawSPdG~~LAs~s-~dg~V~iwd~~---~~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~-DGtVkIWd~~ 159 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLS-NNGNVSVFKDN---KMLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNE-DGELQFFSIR 159 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEE-TTSCEEEEETT---EEEEECCCSSCSTTTCEEEEEECSSSSCEEEEET-TSEEEEEECC
T ss_pred CCcEEEEEECCCCCEEEEEe-CCCcEEEEeCC---ceeeeccCCCccccccEEEEEEcCCCCEEEEEcC-CCEEEEEECC
Confidence 44578999999998887766 67778777733 1111111111 13678999999999988764 5689999998
Q ss_pred Cce--------EEEEecC----CCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceE----EEEecCCCCcc
Q psy5806 1120 GQH--------KKILVND----LMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRT----VLVEEDLAFPN 1183 (1332)
Q Consensus 1120 G~~--------~~~~~~~----~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~----~l~~~~l~~p~ 1183 (1332)
+.. ...+... ......|+..| +| | .+-... ..|..-++++.... .+-...-....
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg-L-aass~D------~tVrlWd~~~~~~~~~~~tL~~~h~~~V~ 230 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV-L-VAALSN------NSVFSMTVSASSHQPVSRMIQNASRRKIT 230 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE-E-EEEETT------CCEEEECCCSSSSCCCEEEEECCCSSCCC
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcC-Cc-E-EEEeCC------CeEEEEECCCCccccceeeecccccCcEE
Confidence 653 2234222 24789999999 56 3 343333 56777788886632 23211123466
Q ss_pred eEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEE
Q psy5806 1184 ELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVI 1218 (1332)
Q Consensus 1184 glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~ 1218 (1332)
.+++. ++.|--+ ..++|...|..+.....+.
T Consensus 231 svaFs--g~~LASa--~~~tIkLWd~~~~~~~~~~ 261 (588)
T 2j04_A 231 DLKIV--DYKVVLT--CPGYVHKIDLKNYSISSLK 261 (588)
T ss_dssp CEEEE--TTEEEEE--CSSEEEEEETTTTEEEEEE
T ss_pred EEEEE--CCEEEEE--eCCeEEEEECCCCeEEEEE
Confidence 77776 4555544 3578999998876654443
No 395
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=86.93 E-value=45 Score=37.54 Aligned_cols=192 Identities=6% Similarity=-0.004 Sum_probs=106.4
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEE
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKK 1124 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~ 1124 (1332)
.+..++|++.++.|.... .+.+...+++.+ +.+..........+++.+.++.+.++....+.|.++++. |+...
T Consensus 21 ~V~~v~fs~dg~~la~g~--~~~~~iw~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~ 95 (355)
T 3vu4_A 21 PVTDYEFNQDQSCLILST--LKSFEIYNVHPV---AHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVS 95 (355)
T ss_dssp CCCEEEECTTSSEEEEEC--SSEEEEEEETTE---EEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEE
T ss_pred ceEEEEECCCCCEEEEEc--CCEEEEEecCCc---ceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEE
Confidence 356889999887666553 234555564422 222222222345567776677777776666799999986 44444
Q ss_pred EEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCC-ceEEEEecCCCCcceE-EEecCCCEEEEE-EcCC
Q psy5806 1125 ILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGS-YRTVLVEEDLAFPNEL-AIDFKQRRLFWA-DSTN 1201 (1332)
Q Consensus 1125 ~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~-~~~~l~~~~l~~p~gl-aiD~~~~~LY~~-d~~~ 1201 (1332)
.+. ......++++++. .++.+.. .+|...++... .....+.. |.++ ++.+ +.|-++ -...
T Consensus 96 ~~~-~~~~v~~v~~~~~--~~~~~~~--------~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~--~~la~~sg~~~ 158 (355)
T 3vu4_A 96 RIK-VDAPVKDLFLSRE--FIVVSYG--------DVISVFKFGNPWKRITDDIR----FGGVCEFSN--GLLVYSNEFNL 158 (355)
T ss_dssp EEE-CSSCEEEEEECSS--EEEEEET--------TEEEEEESSTTCCBSSCCEE----EEEEEEEET--TEEEEEESSCT
T ss_pred EEE-CCCceEEEEEcCC--EEEEEEc--------CEEEEEECCCCceeeEEecc----CCceEEEEc--cEEEEeCCCcC
Confidence 343 3346788888874 4444432 34666666554 21111111 3333 3433 455554 4566
Q ss_pred CeEEEEecCCCc-----------------eEEEEe-ecccceEEEecCCccccccEEEEEECCCCE-EEEEEecCCCCcc
Q psy5806 1202 KRIEYCDFFGRS-----------------RKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMS-VVIAREKSDTGQW 1262 (1332)
Q Consensus 1202 ~~I~~~d~dG~~-----------------~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~-V~~~~~~~g~~~~ 1262 (1332)
+.|...|+.... ...+.. .....+|++ .+ ++.+..+-...++ |...+..++ .
T Consensus 159 g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~-----s~-~g~~l~s~s~d~~~v~iwd~~~~---~ 229 (355)
T 3vu4_A 159 GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRL-----NR-KSDMVATCSQDGTIIRVFKTEDG---V 229 (355)
T ss_dssp TCEEEEECCC------------------CCEEECCCSSCEEEEEE-----CT-TSSEEEEEETTCSEEEEEETTTC---C
T ss_pred cEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEE-----CC-CCCEEEEEeCCCCEEEEEECCCC---c
Confidence 778887876432 222222 455667777 22 3444455556676 888887777 5
Q ss_pred eEEEEe
Q psy5806 1263 DVHLIR 1268 (1332)
Q Consensus 1263 ~~~~~~ 1268 (1332)
....+.
T Consensus 230 ~~~~~~ 235 (355)
T 3vu4_A 230 LVREFR 235 (355)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555555
No 396
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=86.74 E-value=0.44 Score=39.73 Aligned_cols=34 Identities=26% Similarity=0.707 Sum_probs=24.0
Q ss_pred cccCCCC-cceeeec-cCCCceEEeCCCCceecCCCCCcC
Q psy5806 393 QSHCAPK-VCSHICL-PNKHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 393 ~n~C~~g-~CshlCl-~~~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
.+||.|| .|..+.- +..++|+|.|+.||+ |..|.
T Consensus 11 ~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce 46 (63)
T 1hae_A 11 KTFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCT 46 (63)
T ss_dssp HTTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSC
T ss_pred CCcCCCCcEEecCCccCCCCCEEEECCCCCc----CCccC
Confidence 5778864 4544331 356799999999997 67885
No 397
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=86.59 E-value=0.33 Score=37.72 Aligned_cols=33 Identities=21% Similarity=0.572 Sum_probs=22.5
Q ss_pred cccCCCCcceeeeccCCCceEEeCCCCceecCCCCCcCC
Q psy5806 393 QSHCAPKVCSHICLPNKHRFTCQCPLGLTLSPDNKSCSE 431 (1332)
Q Consensus 393 ~n~C~~g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~~ 431 (1332)
.+||.||.|..+ ...++|+|.|+.||+ |..|+.
T Consensus 11 ~~pC~nG~C~~~--~~~~~~~C~C~~Gyt----G~~Ce~ 43 (46)
T 1k36_A 11 NGYCLHGQCIYL--VDMSQNYCRCEVGYT----GVRCEH 43 (46)
T ss_dssp CSSCSSEEEEEE--TTTTEEEEEECTTCS----STTSCC
T ss_pred CCCCCCCEeecc--CCCCCEEEECCCCCc----cCCCCc
Confidence 367777555432 233689999999997 667853
No 398
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=85.96 E-value=73 Score=39.06 Aligned_cols=74 Identities=8% Similarity=-0.039 Sum_probs=46.7
Q ss_pred ceEEEecCCCEEEEEEc--------------------------------------CCCeEEEEecC-CCceEEEEeeccc
Q psy5806 1183 NELAIDFKQRRLFWADS--------------------------------------TNKRIEYCDFF-GRSRKIVISKVAP 1223 (1332)
Q Consensus 1183 ~glaiD~~~~~LY~~d~--------------------------------------~~~~I~~~d~d-G~~~~~~~~~~~P 1223 (1332)
.++++|+++++||+... ..+.|..+|+. |+.+-.. ....|
T Consensus 396 ~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~-~~~~~ 474 (599)
T 1w6s_A 396 GHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEK-MERFA 474 (599)
T ss_dssp CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEE-EESSC
T ss_pred CCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEe-cCCCC
Confidence 47899999999998531 22466666764 3322111 11111
Q ss_pred --ce-EEEecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEe
Q psy5806 1224 --YG-LSVRQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIR 1268 (1332)
Q Consensus 1224 --~g-lav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~ 1268 (1332)
-| |+. .++.||+.. ..+.|+.+|..+| +.+-..+
T Consensus 475 ~~~g~~~t-------agg~vf~gt-~dg~l~A~D~~tG---~~lW~~~ 511 (599)
T 1w6s_A 475 VWGGTMAT-------AGDLVFYGT-LDGYLKARDSDTG---DLLWKFK 511 (599)
T ss_dssp CCSBCEEE-------TTTEEEEEC-TTSEEEEEETTTC---CEEEEEE
T ss_pred ccCcceEe-------cCCEEEEEC-CCCeEEEEECCCC---CEEEEee
Confidence 13 666 788899875 5689999999998 5554443
No 399
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=85.24 E-value=45 Score=36.04 Aligned_cols=244 Identities=10% Similarity=0.034 Sum_probs=126.1
Q ss_pred cceEEEEeecceEEEEeCCCCCCCCcccccCC-ccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCC
Q psy5806 1012 REFLLYTSRFGVIRRISLDTADLLPVTLPFPE-YMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTI 1090 (1332)
Q Consensus 1012 ~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~-~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~ 1090 (1332)
...|.++..+. |+.-++.+...... +...+ ...+.+++|++.++.|.... ..+.|...++.++.....+. ...
T Consensus 36 ~~~lAvg~D~t-V~iWd~~tg~~~~~-~~~~~~~~~V~~v~~~~~~~~l~sgs-~Dg~v~iw~~~~~~~~~~~~---~h~ 109 (318)
T 4ggc_A 36 GNVLAVALDNS-VYLWSASSGDILQL-LQMEQPGEYISSVAWIKEGNYLAVGT-SSAEVQLWDVQQQKRLRNMT---SHS 109 (318)
T ss_dssp TSEEEEEETTE-EEEEETTTCCEEEE-EECCSTTCCEEEEEECTTSSEEEEEE-TTSEEEEEETTTTEEEEEEE---CCS
T ss_pred CCEEEEEeCCE-EEEEECCCCCEEEE-EEecCCCCeEEEEEECCCCCEEEEEE-CCCcEEEeecCCceeEEEec---Ccc
Confidence 34455555555 66666654332211 11222 23467999999988766554 77889988877543332222 222
Q ss_pred ceeeEEEecCCeEEEEcCCCceEEEEeeCCceE--EEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCC
Q psy5806 1091 RDNFVIDWVANNIYYIDSQMHTINVARSDGQHK--KILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDG 1168 (1332)
Q Consensus 1091 p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~--~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG 1168 (1332)
..-.++.+.+..|... ...+.+.......... ..+.........++..+...+|+.+.. . +.|..-++..
T Consensus 110 ~~~~~~~~~~~~l~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~-d------~~i~iwd~~~ 181 (318)
T 4ggc_A 110 ARVGSLSWNSYILSSG-SRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGN-D------NLVNVWPSAP 181 (318)
T ss_dssp SCEEEEEEETTEEEEE-ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET-T------SCEEEEESSC
T ss_pred ceEEEeecCCCEEEEE-ecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEec-C------cceeEEECCC
Confidence 3334455546655444 3445666666553322 224444456777888885555544332 2 3455555532
Q ss_pred Cc-e---EEEEecCCCCcceEEEecCCCEEEEE-E-cCCCeEEEEecCCCceEEEEe-ecccceEEEecCCccccccEEE
Q psy5806 1169 SY-R---TVLVEEDLAFPNELAIDFKQRRLFWA-D-STNKRIEYCDFFGRSRKIVIS-KVAPYGLSVRQSPGKAFIVELY 1241 (1332)
Q Consensus 1169 ~~-~---~~l~~~~l~~p~glaiD~~~~~LY~~-d-~~~~~I~~~d~dG~~~~~~~~-~~~P~glav~~~~~~~~~~~lY 1241 (1332)
.. . .............++..+.+..+... . ...+.|...+........... ......+.. ...++.++
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~ 256 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILW-----SPHYKELI 256 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEE-----ETTTTEEE
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeee-----cccccceE
Confidence 22 1 11111112234456666555554433 2 234567666665544333333 333444444 23455666
Q ss_pred EEE-CCCCEEEEEEecCCCCcceEEEEecCCCCeeeE
Q psy5806 1242 WTD-WEAMSVVIAREKSDTGQWDVHLIRSNQEDFLNI 1277 (1332)
Q Consensus 1242 wtd-~~~~~V~~~~~~~g~~~~~~~~~~~~~~~~~~i 1277 (1332)
.+- ...+.|...+..++ +.+..+......+..|
T Consensus 257 ~~sg~~d~~i~iwd~~~~---~~~~~l~gH~~~V~~l 290 (318)
T 4ggc_A 257 SGHGFAQNQLVIWKYPTM---AKVAELKGHTSRVLSL 290 (318)
T ss_dssp EEECTTTCCEEEEETTTC---CEEEEECCCSSCEEEE
T ss_pred EEEEcCCCEEEEEECCCC---cEEEEEcCCCCCEEEE
Confidence 554 36688888888777 5555555444444444
No 400
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=84.45 E-value=52 Score=41.01 Aligned_cols=109 Identities=10% Similarity=0.033 Sum_probs=56.4
Q ss_pred CcEEEEEeCCCCeEEEEECCCCCCceeEeecC----------CCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEE
Q psy5806 1056 KNLIYFADMRSGNLRTFDMSDSTRIKPIPLMN----------DTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKK 1124 (1332)
Q Consensus 1056 ~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~----------~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~ 1124 (1332)
+++||+.. ..+.|+.+++.+|......-... .....+++++ ++.||+... .+.|..++.. |+.+=
T Consensus 66 ~g~vyv~~-~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~~-dg~l~alD~~tG~~~W 141 (668)
T 1kv9_A 66 DGVIYTSM-SWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GDKVYVGTL-DGRLIALDAKTGKAIW 141 (668)
T ss_dssp TTEEEEEE-GGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BTEEEEECT-TSEEEEEETTTCCEEE
T ss_pred CCEEEEEC-CCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE--CCEEEEEcC-CCEEEEEECCCCCEee
Confidence 46777765 34567777766554433221100 0013567887 889999864 4678888874 77543
Q ss_pred EEecC-----CCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEec-CCCce
Q psy5806 1125 ILVND-----LMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYL-DGSYR 1171 (1332)
Q Consensus 1125 ~~~~~-----~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~l-dG~~~ 1171 (1332)
..... ......-+|. .+.+|+...+.. ....+.|+..+. +|+.+
T Consensus 142 ~~~~~~~~~~~~~~~~P~v~--~~~v~vg~~~~~-~~~~g~v~a~D~~tG~~~ 191 (668)
T 1kv9_A 142 SQQTTDPAKPYSITGAPRVV--KGKVIIGNGGAE-YGVRGFVSAYDADTGKLA 191 (668)
T ss_dssp EEECSCTTSSCBCCSCCEEE--TTEEEECCBCTT-TCCBCEEEEEETTTCCEE
T ss_pred eeccCCCCCcceecCCCEEE--CCEEEEeCCCCC-cCCCCEEEEEECCCCcEE
Confidence 32111 0000111222 568887754320 011356777776 45443
No 401
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=83.86 E-value=0.32 Score=48.06 Aligned_cols=40 Identities=18% Similarity=0.516 Sum_probs=31.0
Q ss_pred CcccCCCCCCc--cccccCCCCccccCCCCeeEccCCccccc
Q psy5806 970 NACGSNNGGCS--HLCLRNPTNFTCACPTGILLSADRRSCFS 1009 (1332)
Q Consensus 970 n~C~~~nGgCs--hlCl~~p~~~~C~Cp~g~~l~~d~~tC~~ 1009 (1332)
++|...++.|. +.|+.++++|+|.|+.||.+..++++|.+
T Consensus 97 deC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~ 138 (143)
T 2bou_A 97 DECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQK 138 (143)
T ss_dssp CHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBT
T ss_pred cCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCcc
Confidence 44544334554 68999999999999999999888888875
No 402
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=83.27 E-value=36 Score=41.41 Aligned_cols=183 Identities=6% Similarity=-0.079 Sum_probs=110.9
Q ss_pred ccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceE
Q psy5806 1044 YMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHK 1123 (1332)
Q Consensus 1044 ~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~ 1123 (1332)
...+..++|.|.+ .+..+++.++....++.......+.++|..+.+..|=.+. ..+.|.+++.++ ..
T Consensus 52 ~~~v~~V~FsPdg-----------~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s-~dg~V~iwd~~~-~l 118 (588)
T 2j04_A 52 SKNLFHVKEFPLE-----------FENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLS-NNGNVSVFKDNK-ML 118 (588)
T ss_dssp GGGTEEEEEECCC-----------CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEE-TTSCEEEEETTE-EE
T ss_pred CccEEEEEECCCC-----------CcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEe-CCCcEEEEeCCc-ee
Confidence 3457788888876 2222333433333333212245678888888777775544 456788888655 11
Q ss_pred EEEecCC----CCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCce-------EEEEecC----CCCcceEEEe
Q psy5806 1124 KILVNDL----MEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYR-------TVLVEED----LAFPNELAID 1188 (1332)
Q Consensus 1124 ~~~~~~~----~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~-------~~l~~~~----l~~p~glaiD 1188 (1332)
..+.... ....++|++|...+|+.+... +.|..-++.+... ...+... ..+...+++.
T Consensus 119 ~~l~~~~~~~~~sv~svafSPDG~~LAsgs~D-------GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawS 191 (588)
T 2j04_A 119 TNLDSKGNLSSRTYHCFEWNPIESSIVVGNED-------GELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWY 191 (588)
T ss_dssp EECCCSSCSTTTCEEEEEECSSSSCEEEEETT-------SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEE
T ss_pred eeccCCCccccccEEEEEEcCCCCEEEEEcCC-------CEEEEEECCCCccccccceeeeeeecccccccccEEEEEEc
Confidence 1122110 137889999988888887654 3566667766532 1222111 2467778888
Q ss_pred cCCCEEEEEEcCCCeEEEEecCCCce----EEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1189 FKQRRLFWADSTNKRIEYCDFFGRSR----KIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1189 ~~~~~LY~~d~~~~~I~~~d~dG~~~----~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
+++ +.+-+..+.|...++++... +.+.+ .....+++. .++.|-.+- .++|...+..++
T Consensus 192 Pdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaF-------sg~~LASa~--~~tIkLWd~~~~ 255 (588)
T 2j04_A 192 EDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKI-------VDYKVVLTC--PGYVHKIDLKNY 255 (588)
T ss_dssp TTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEE-------ETTEEEEEC--SSEEEEEETTTT
T ss_pred CCc---EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEE-------ECCEEEEEe--CCeEEEEECCCC
Confidence 765 45666778899999987653 22322 345778888 455666553 488998887766
No 403
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=82.06 E-value=0.37 Score=50.00 Aligned_cols=38 Identities=24% Similarity=0.651 Sum_probs=30.9
Q ss_pred ccCC-CCcceeeeccCCCceEEeCCCCceecC-CCCCcCC
Q psy5806 394 SHCA-PKVCSHICLPNKHRFTCQCPLGLTLSP-DNKSCSE 431 (1332)
Q Consensus 394 n~C~-~g~CshlCl~~~~~~~C~C~~G~~L~~-d~~tC~~ 431 (1332)
++|. ++.|.|.|++..++|+|.|+.||++.+ |++.|+.
T Consensus 97 ~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~ 136 (186)
T 1z1y_A 97 XNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTX 136 (186)
T ss_dssp CCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEE
T ss_pred CCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceE
Confidence 4566 567888888999999999999999866 7788854
No 404
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=81.30 E-value=1.2e+02 Score=38.06 Aligned_cols=219 Identities=6% Similarity=-0.070 Sum_probs=117.1
Q ss_pred CcceEEEEeecceEEEEeCCCCCCCCcccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCC
Q psy5806 1011 TREFLLYTSRFGVIRRISLDTADLLPVTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTI 1090 (1332)
Q Consensus 1011 p~~~ll~~~~~~~i~~i~l~~~~~~~~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~ 1090 (1332)
..-||-+.+... +.+.+-........ .+...-..+..|..|. ++.||+.. . +-|.+++........ ........
T Consensus 31 ~~G~lWigT~~G-L~ryDG~~~~~~~~-~~~~~~~~i~~i~~d~-~g~lWigT-~-~Gl~~yd~~~~~f~~-~~~~~~~~ 104 (758)
T 3ott_A 31 SEGLIWIGSNKG-LFSYDGYSTQQHFT-YGENNNTRIYCGVIID-NTYLYMGT-D-NGILVYNYRADRYEQ-PETDFPTD 104 (758)
T ss_dssp TTSCEEEEESSC-EEEECSSCEEECSC-TTSTTSSCEEEEEEET-TTEEEEEE-T-TEEEEEETTTTEECC-CSCCCCSC
T ss_pred CCCCEEEEECCC-ccccCCCceEEEEc-cCCCCCceEEEEEEcC-CCcEEEEe-C-CCeEEEeCCCCEEEC-cccCCCce
Confidence 456788888888 77775321100000 0001112356676675 46788875 3 348888854221111 00001112
Q ss_pred ceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEEEe---cC--CCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEe
Q psy5806 1091 RDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKILV---ND--LMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVY 1165 (1332)
Q Consensus 1091 p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~~~---~~--~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ 1165 (1332)
...|+.+ .++||++... .+.+.+......+.+. .+ ......|+.|. .|.|++...++ |.+.+
T Consensus 105 i~~i~~~--~g~lWigt~~--Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigt~~G--------l~~~~ 171 (758)
T 3ott_A 105 VRTMALQ--GDTLWLGALN--GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTK-DNQIYVGTYNG--------LCRYI 171 (758)
T ss_dssp EEEEEEE--TTEEEEEETT--EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECT-TCCEEEEETTE--------EEEEE
T ss_pred EEEEEec--CCcEEEEcCC--cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcC-CCCEEEEeCCC--------HhhCc
Confidence 3445443 7889887543 5666766543332221 11 23467888887 78887765433 88887
Q ss_pred cCCCceEEEEecC---C--CCcceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEEe--ecccceEEEecCCcccccc
Q psy5806 1166 LDGSYRTVLVEED---L--AFPNELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIV 1238 (1332)
Q Consensus 1166 ldG~~~~~l~~~~---l--~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~ 1238 (1332)
......+.+.... + .....|..|.+++.||+... +-|.+++......+.+.. .....+|.. +.++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~--~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~------d~~g 243 (758)
T 3ott_A 172 PSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE--GYLFQYFPSTGQIKQTEAFHNNSIKSLAL------DGNG 243 (758)
T ss_dssp TTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE--EEEEEEETTTTEEEEEEEEEEEEEEEEEE------CTTC
T ss_pred cCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC--CCCeEEcCCCCeEEeccCCCCCeEEEEEE------cCCC
Confidence 6654433221111 0 12446778866677787652 358888876543222222 334566777 4567
Q ss_pred EEEEEECCCCEEEEEEecCC
Q psy5806 1239 ELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1239 ~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.||+.-. +.++++++.++
T Consensus 244 ~lWigT~--~Gl~~~~~~~~ 261 (758)
T 3ott_A 244 DLLAGTD--NGLYVYHNDTT 261 (758)
T ss_dssp CEEEEET--TEEEEECCTTS
T ss_pred CEEEEeC--CceeEEecCCC
Confidence 7877763 46777776554
No 405
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=80.73 E-value=55 Score=35.97 Aligned_cols=199 Identities=12% Similarity=-0.046 Sum_probs=101.9
Q ss_pred ceEEEEEeCC-CcEEEEEeCCCCeEEEEECCCCCCceeE-eecCCCCceeeEEEecC-CeEEEEcCCCceEEEEeeCCce
Q psy5806 1046 SSIFFDYHYS-KNLIYFADMRSGNLRTFDMSDSTRIKPI-PLMNDTIRDNFVIDWVA-NNIYYIDSQMHTINVARSDGQH 1122 (1332)
Q Consensus 1046 ~~~~id~d~~-~~~lY~sd~~~~~I~~~~l~~g~~~~~i-~~~~~~~p~glAvDw~~-~~LY~td~~~~~I~v~~ldG~~ 1122 (1332)
.+.+++|.+. ++.++.+-...++|+..++.++...... .......+..+++.+.. +.+.++-...+.|.+.++.+..
T Consensus 59 ~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~ 138 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEG 138 (316)
T ss_dssp CEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSS
T ss_pred cEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCC
Confidence 4678888653 3344555557788888887644322222 21223457788888653 4555666667789999887542
Q ss_pred E-EE---EecCCCCceEEEEcCCC----------------cEEEEEecCCCCCCCCCcEEEEecCCCce-EEE--EecCC
Q psy5806 1123 K-KI---LVNDLMEPLAIAVYPRR----------------GLLFYSHWGLYDNSPTTKIEKVYLDGSYR-TVL--VEEDL 1179 (1332)
Q Consensus 1123 ~-~~---~~~~~~~P~~iavdp~~----------------g~Lywtd~~~~~~~~~~~I~r~~ldG~~~-~~l--~~~~l 1179 (1332)
. .. +..-......++.+|.. +.++.+-... ..=+|+. +..... ..+ +...-
T Consensus 139 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D----~~v~lWd--~~~~~~~~~~~~l~~h~ 212 (316)
T 3bg1_A 139 QWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCD----NLIKLWK--EEEDGQWKEEQKLEAHS 212 (316)
T ss_dssp CEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTT----SBCCEEE--ECTTSCEEEEECCBCCS
T ss_pred CcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCC----CeEEEEE--eCCCCccceeeecccCC
Confidence 1 11 11111234556666641 2344443222 1233443 332221 111 11122
Q ss_pred CCcceEEEecCC---CEEEEEEcCCCeEEEEecCCC--c---eEEEEe-ecccceEEEecCCccccccEEEEEECCCCEE
Q psy5806 1180 AFPNELAIDFKQ---RRLFWADSTNKRIEYCDFFGR--S---RKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSV 1250 (1332)
Q Consensus 1180 ~~p~glaiD~~~---~~LY~~d~~~~~I~~~d~dG~--~---~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V 1250 (1332)
.....+++.++. ..+..+-...++|...+++.. . .+.+.. .....++++ .+.+..| .+-...+.|
T Consensus 213 ~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~-----sp~g~~l-as~~~D~~v 286 (316)
T 3bg1_A 213 DWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSW-----SITANIL-AVSGGDNKV 286 (316)
T ss_dssp SCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEE-----CTTTCCE-EEEESSSCE
T ss_pred CceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEE-----cCCCCEE-EEEcCCCeE
Confidence 345677777664 244555567788888887642 1 122222 444567777 2223333 333455666
Q ss_pred EEEEec
Q psy5806 1251 VIAREK 1256 (1332)
Q Consensus 1251 ~~~~~~ 1256 (1332)
...+..
T Consensus 287 ~lw~~~ 292 (316)
T 3bg1_A 287 TLWKES 292 (316)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 666643
No 406
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=80.41 E-value=0.35 Score=52.94 Aligned_cols=44 Identities=25% Similarity=0.582 Sum_probs=34.7
Q ss_pred CCcccCCCCCCcc--ccccCCCCccccCCCCeeEccCCccccccCcce
Q psy5806 969 PNACGSNNGGCSH--LCLRNPTNFTCACPTGILLSADRRSCFSRTREF 1014 (1332)
Q Consensus 969 ~n~C~~~nGgCsh--lCl~~p~~~~C~Cp~g~~l~~d~~tC~~~p~~~ 1014 (1332)
.++|+.....|++ .|.+++++|.|.|+.||. .|+++|.+...+-
T Consensus 5 iDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d~d~Pq 50 (285)
T 1gl4_A 5 QQTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVAEGSPQ 50 (285)
T ss_dssp --CHHHHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEEETTCEE
T ss_pred chhccCCCCCCCCCCEeEcCCCCeEEEcCCCCC--CCCCcCCCCCCCc
Confidence 6889877778973 699999999999999998 5788998764443
No 407
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=79.69 E-value=0.8 Score=50.81 Aligned_cols=35 Identities=29% Similarity=0.726 Sum_probs=31.2
Q ss_pred CCcceeeeccCCCceEEeCCCCceecCCCCCcCCC
Q psy5806 398 PKVCSHICLPNKHRFTCQCPLGLTLSPDNKSCSES 432 (1332)
Q Consensus 398 ~g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~~~ 432 (1332)
+..|.|.|.+..+++.|.|+.||.|..|.++|...
T Consensus 131 ~~~c~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 165 (278)
T 3dem_A 131 ELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVE 165 (278)
T ss_dssp -CCCSSEEEEETTEEEEECCTTCEECTTSSCEECC
T ss_pred cccCCcCcCCccCCcEEEeCCcceeccCCCCCccc
Confidence 34899999999999999999999999999999754
No 408
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=79.64 E-value=34 Score=41.30 Aligned_cols=155 Identities=10% Similarity=0.101 Sum_probs=92.4
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecC-C-eEEEEcCCCceEEEEeeC-Cce
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVA-N-NIYYIDSQMHTINVARSD-GQH 1122 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~-~-~LY~td~~~~~I~v~~ld-G~~ 1122 (1332)
.+.+++|.+. +.|. +-..+++|...++.++................|++.+.. + ++.++-+..+.|.++++. ++.
T Consensus 268 ~v~sv~~s~~-~~la-sgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~ 345 (524)
T 2j04_B 268 LITTFDFLSP-TTVV-CGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT 345 (524)
T ss_dssp CEEEEEESSS-SEEE-EEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHH
T ss_pred CEEEEEecCC-CeEE-EEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc
Confidence 4678999864 4554 444789999999875433222232334456777543332 3 777887778899999986 333
Q ss_pred EEEEecCC--CCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCce-EEEEecCCCCcceEEEecCCCEEEEEEc
Q psy5806 1123 KKILVNDL--MEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYR-TVLVEEDLAFPNELAIDFKQRRLFWADS 1199 (1332)
Q Consensus 1123 ~~~~~~~~--~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~-~~l~~~~l~~p~glaiD~~~~~LY~~d~ 1199 (1332)
..++.... .....|+.+|. +..+.+.... ..|...++..... ..+.. .....+.|++.++++.|. +-+
T Consensus 346 ~~~~~~~~~~~~v~~v~fsp~-~~~l~s~~~d------~tv~lwd~~~~~~~~~l~g-H~~~V~sva~Sp~g~~l~-Sgs 416 (524)
T 2j04_B 346 TKTTVSRFRGSNLVPVVYCPQ-IYSYIYSDGA------SSLRAVPSRAAFAVHPLVS-RETTITAIGVSRLHPMVL-AGS 416 (524)
T ss_dssp HCEEEEECSCCSCCCEEEETT-TTEEEEECSS------SEEEEEETTCTTCCEEEEE-CSSCEEEEECCSSCCBCE-EEE
T ss_pred ccccccccccCcccceEeCCC-cCeEEEeCCC------CcEEEEECcccccceeeec-CCCceEEEEeCCCCCeEE-EEE
Confidence 33322111 23578999995 4445554333 3465556544332 33332 345677888888766554 445
Q ss_pred CCCeEEEEecCC
Q psy5806 1200 TNKRIEYCDFFG 1211 (1332)
Q Consensus 1200 ~~~~I~~~d~dG 1211 (1332)
..+.|...++.+
T Consensus 417 ~Dgtv~lwd~~~ 428 (524)
T 2j04_B 417 ADGSLIITNAAR 428 (524)
T ss_dssp TTTEEECCBSCS
T ss_pred CCCEEEEEechH
Confidence 667777766654
No 409
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=79.52 E-value=68 Score=36.68 Aligned_cols=134 Identities=12% Similarity=0.014 Sum_probs=72.5
Q ss_pred ceeeEEEecC-CeEEEEcCCCceEEEEeeCCceEEEEecCCC-----CceEEEEcCC-CcEEEEEecCC------CCCCC
Q psy5806 1091 RDNFVIDWVA-NNIYYIDSQMHTINVARSDGQHKKILVNDLM-----EPLAIAVYPR-RGLLFYSHWGL------YDNSP 1157 (1332)
Q Consensus 1091 p~glAvDw~~-~~LY~td~~~~~I~v~~ldG~~~~~~~~~~~-----~P~~iavdp~-~g~Lywtd~~~------~~~~~ 1157 (1332)
+..|++|... +.||+... +.|.+.+-.|..-+.+...+. ....|+++|. .+.||..-... .....
T Consensus 234 ~~~i~~~~~~~~~l~vg~~--~gl~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~ 311 (394)
T 3b7f_A 234 PHCVVQHPAAPDILYQQNH--CGIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGG 311 (394)
T ss_dssp EEEEEECSSSTTEEEEEET--TEEEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCS
T ss_pred eeEEEECCCCCCEEEEEcC--CeEEEeCCCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCC
Confidence 5678998753 77887653 346555444554333322222 2357899884 46777753110 00011
Q ss_pred CCcEEEEecCCCceEEEEecCCCCc--------ceEEEecCC-CEEEEEEcCCCeEEEEecCCCceEEEEe-ecccceEE
Q psy5806 1158 TTKIEKVYLDGSYRTVLVEEDLAFP--------NELAIDFKQ-RRLFWADSTNKRIEYCDFFGRSRKIVIS-KVAPYGLS 1227 (1332)
Q Consensus 1158 ~~~I~r~~ldG~~~~~l~~~~l~~p--------~glaiD~~~-~~LY~~d~~~~~I~~~d~dG~~~~~~~~-~~~P~gla 1227 (1332)
...|+|..=.|..-+.+. .++..+ .+|++|+.+ ++||+. ...+.|.+..-.|..-+.+.. +..-.+|+
T Consensus 312 ~~~~~~S~DgG~tW~~~~-~glp~~~~~~~~~~~~~~~~p~~~~~l~~g-~~~g~l~~S~D~G~tW~~~~~~lp~~~~v~ 389 (394)
T 3b7f_A 312 KPAVYVTRDAGESWQRQD-RGLPTDQAWLTVKRQAMTADAHAPVGVYFG-TTGGEIWASADEGEHWQCIASHLPHIYAVQ 389 (394)
T ss_dssp SCCEEEESSTTSCCEEEC-BTSCCSSCCCCCCTBSEEECCSSSCCEEEE-CTTSCEEEESSTTSBCEEEECSCSCEEEEE
T ss_pred ceeEEEECCCCCCceECC-CCCCCccccceEEEEEEEECCCCCCEEEEE-eCCCeEEEECCCCCCceEcccCCCCeeEEE
Confidence 346887654444444432 333321 368898754 568876 345668887666777666554 33333443
Q ss_pred E
Q psy5806 1228 V 1228 (1332)
Q Consensus 1228 v 1228 (1332)
+
T Consensus 390 ~ 390 (394)
T 3b7f_A 390 S 390 (394)
T ss_dssp E
T ss_pred E
Confidence 3
No 410
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=77.18 E-value=1e+02 Score=35.02 Aligned_cols=74 Identities=8% Similarity=-0.137 Sum_probs=50.3
Q ss_pred ceEEEEEeC-------CCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEee
Q psy5806 1046 SSIFFDYHY-------SKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARS 1118 (1332)
Q Consensus 1046 ~~~~id~d~-------~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~l 1118 (1332)
.+.+++|.+ .++++..+-...++|+.-++..+.....+. ..-..+..+++.+.+.++.++-...+.|.++++
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~ 216 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGY-PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDW 216 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEE-ECSSCEEEEEEETTEEEEEEEEETTSEEEEEET
T ss_pred ceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeec-CCCCCcEEEEECCCCCceEEecCCCCEEEEEEC
Confidence 467888876 356777777788999988876433332222 233456778888777666677667789999998
Q ss_pred CC
Q psy5806 1119 DG 1120 (1332)
Q Consensus 1119 dG 1120 (1332)
..
T Consensus 217 ~t 218 (393)
T 4gq1_A 217 TL 218 (393)
T ss_dssp TC
T ss_pred CC
Confidence 63
No 411
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=77.10 E-value=87 Score=37.72 Aligned_cols=71 Identities=10% Similarity=0.038 Sum_probs=54.3
Q ss_pred CCceeeEEEecCCeEEEEcCCCceEEEEeeCC-------c---eEEE----EecCCCCceEEEEcCCCcEEEEEecCCCC
Q psy5806 1089 TIRDNFVIDWVANNIYYIDSQMHTINVARSDG-------Q---HKKI----LVNDLMEPLAIAVYPRRGLLFYSHWGLYD 1154 (1332)
Q Consensus 1089 ~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG-------~---~~~~----~~~~~~~P~~iavdp~~g~Lywtd~~~~~ 1154 (1332)
.+|.|+-+++.++.+|++..-..++.|++++- + .+.+ +.-+ ..|...++|+ +|..|-|-.-.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G-lGPlHt~Fd~-~G~aYTtlfid-- 398 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG-LGPLHTTFDG-RGNAYTTLFID-- 398 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC-SCEEEEEECS-SSEEEEEETTT--
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC-CcccEEEECC-CCceEeeeeec--
Confidence 58999999999999999999999999999862 1 1111 2224 4799999999 78999997654
Q ss_pred CCCCCcEEEEecC
Q psy5806 1155 NSPTTKIEKVYLD 1167 (1332)
Q Consensus 1155 ~~~~~~I~r~~ld 1167 (1332)
+.|.+-+++
T Consensus 399 ----SqvvkWni~ 407 (638)
T 3sbq_A 399 ----SQVVKWNME 407 (638)
T ss_dssp ----TEEEEEEHH
T ss_pred ----ceEEEEecc
Confidence 567776663
No 412
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=76.81 E-value=1.1e+02 Score=34.99 Aligned_cols=197 Identities=9% Similarity=-0.017 Sum_probs=117.9
Q ss_pred eEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeC-Cce---
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQH--- 1122 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~--- 1122 (1332)
+..++++. . +..+-...+.|...+...................++++.+.++.|.. -...+.|.+.+.. ++.
T Consensus 192 v~~~s~~~--~-~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s-~~~D~~v~i~~~~~~~~~~~ 267 (420)
T 4gga_A 192 VGSLSWNS--Y-ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLAS-GGNDNLVNVWPSAPGEGGWV 267 (420)
T ss_dssp EEEEEEET--T-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEE-EETTSCEEEEESSCCSSCSC
T ss_pred eEEEeeCC--C-EEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeee-eeccccceEEeeccccccce
Confidence 44565553 3 44444467778777765322222222233446677888876666654 4455678888875 321
Q ss_pred -EEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEc-C
Q psy5806 1123 -KKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADS-T 1200 (1332)
Q Consensus 1123 -~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~-~ 1200 (1332)
............+++..|..+.++.+..+. ....|..-++........+.. -..+..+.+.+..+.|+.+-. .
T Consensus 268 ~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs----~D~~I~iwd~~t~~~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~ 342 (420)
T 4gga_A 268 PLQTFTQHQGAVKAVAWCPWQSNVLATGGGT----SDRHIRIWNVCSGACLSAVDA-HSQVCSILWSPHYKELISGHGFA 342 (420)
T ss_dssp CSEEECCCSSCEEEEEECTTCTTEEEEEECT----TTCEEEEEETTTTEEEEEEEC-SSCEEEEEEETTTTEEEEEECTT
T ss_pred eeeeecccCCceeeeeeCCCcccEEEEEeec----CCCEEEEEeCCccccceeecc-ccceeeeeecCCCCeEEEEEecC
Confidence 122223334578899999888887775443 124566667755554444443 256677888888888887754 4
Q ss_pred CCeEEEEecCCCceEEEEe--ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1201 NKRIEYCDFFGRSRKIVIS--KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1201 ~~~I~~~d~dG~~~~~~~~--~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
.+.|...|+....+...+. .....+|++ .+ ++.+.+|-...++|..-+....
T Consensus 343 d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~-----sp-dg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 343 QNQLVIWKYPTMAKVAELKGHTSRVLSLTM-----SP-DGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp TCCEEEEETTTCCEEEEECCCSSCEEEEEE-----CT-TSSCEEEEETTTEEEEECCSCS
T ss_pred CCEEEEEECCCCcEEEEEcCCCCCEEEEEE-----cC-CCCEEEEEecCCeEEEEECCCC
Confidence 6789988886443322222 455677888 22 3344556567788887776554
No 413
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=76.75 E-value=1.8e+02 Score=37.47 Aligned_cols=152 Identities=11% Similarity=0.023 Sum_probs=88.5
Q ss_pred ceeEEeecCCCceEEEEecCCCceEEEecCCCCceEEEeCCCCCccceeEecCCCeEEEEeCCCCeEEEEeCCC-CceEE
Q psy5806 740 MVASVDVDTKNEYIYWSDISEKTIERVRFDMTGRERLVVNDLNRTESIAVDAIGRKIYWTDMNAQTIMVSDIDG-KNAKV 818 (1332)
Q Consensus 740 ~~~~id~d~~~~~lYwsD~~~~~I~r~~~~g~~~~~vi~~~~~~p~glAvD~~~~nLYwtD~~~~~I~v~~ldG-~~~~~ 818 (1332)
.+.+++|++....|... ..++.|+..+..+... ......-..+..|++.. ++.|+ +-...++|.+.++.. +....
T Consensus 19 ~V~~lafspdg~~lAsg-s~Dg~I~lw~~~~~~~-~~~~~~~~~V~~l~fsp-g~~L~-S~s~D~~v~lWd~~~~~~~~~ 94 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIA-TVTGEVHIYGQQQVEV-VIKLEDRSAIKEMRFVK-GIYLV-VINAKDTVYVLSLYSQKVLTT 94 (902)
T ss_dssp CEEEEEEETTTTEEEEE-ETTSEEEEECSTTCEE-EEECSSCCCEEEEEEET-TTEEE-EEETTCEEEEEETTTCSEEEE
T ss_pred CcEEEEECCCCCEEEEE-eCCCEEEEEeCCCcEE-EEEcCCCCCEEEEEEcC-CCEEE-EEECcCeEEEEECCCCcEEEE
Confidence 46788999876555444 3456777666543321 11222334567889888 66344 445677899999864 33333
Q ss_pred EEecCCCCCeEEEEeCCCCeEEEEecccCcCCCCceEEEecCCCCcEEE-e----------cc-cccCceeEEeCCCCCe
Q psy5806 819 LFWLNLYRPRSIVVHYGLGLMVWADWSRTRLTNNRIEMAHMDGTNRAVF-E----------TE-VIWPSCLAIDYSDNPK 886 (1332)
Q Consensus 819 l~~~~~~~P~~Iavdp~~g~lywtd~g~~~~~~~~I~r~~~dG~~~~~l-~----------~~-l~~P~gl~iD~~~~~~ 886 (1332)
+. .-....+++++|...+|+..... ..|...++++.....+ + .. ......+++.+.+ ..
T Consensus 95 ~~--~~~~V~~v~~sp~g~~l~sgs~d------g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~-~~ 165 (902)
T 2oaj_A 95 VF--VPGKITSIDTDASLDWMLIGLQN------GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRD-IG 165 (902)
T ss_dssp EE--CSSCEEEEECCTTCSEEEEEETT------SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTE-EE
T ss_pred Ec--CCCCEEEEEECCCCCEEEEEcCC------CcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCC-CC
Confidence 32 22457889999986677765532 4576667665432211 0 11 3445678887754 44
Q ss_pred EEEEeCCCCeEEEEccCCC
Q psy5806 887 LYWVDTSKHTIEYKTLATG 905 (1332)
Q Consensus 887 lYw~d~~~~~I~~~~~dG~ 905 (1332)
+..+-...+.| .-++...
T Consensus 166 ~l~~g~~dg~v-lWd~~~~ 183 (902)
T 2oaj_A 166 TVLISYEYVTL-TYSLVEN 183 (902)
T ss_dssp EEEEECSSCEE-EEETTTT
T ss_pred EEEEEeCCCcE-EEECCCC
Confidence 44555555666 6666544
No 414
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=76.52 E-value=0.93 Score=50.51 Aligned_cols=35 Identities=26% Similarity=0.658 Sum_probs=30.8
Q ss_pred CcceeeeccCCCceEEeCCCCceecCCCCCcCCCc
Q psy5806 399 KVCSHICLPNKHRFTCQCPLGLTLSPDNKSCSESP 433 (1332)
Q Consensus 399 g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~~~~ 433 (1332)
..|+|.|.+..++|.|.|..||.|..|+++|...-
T Consensus 131 ~~c~~~C~n~~g~~~csC~~Gy~L~~d~~~C~~~C 165 (286)
T 1nt0_A 131 VPCDHYCHXYLGGYYCSCRVGYILHQNKHTCSALC 165 (286)
T ss_dssp -CCSSEEEEETTEEEEECCTTEEECTTSSCEEECC
T ss_pred ccCCCccccccCceEeecCCCceeccCCCCccccc
Confidence 35999999999999999999999999999996443
No 415
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=75.98 E-value=1.5 Score=54.05 Aligned_cols=36 Identities=25% Similarity=0.625 Sum_probs=29.4
Q ss_pred CCccccccCC--CCccee-----eeccCCCceEEe-CCCCceec
Q psy5806 388 RQPNYQSHCA--PKVCSH-----ICLPNKHRFTCQ-CPLGLTLS 423 (1332)
Q Consensus 388 ~qp~~~n~C~--~g~Csh-----lCl~~~~~~~C~-C~~G~~L~ 423 (1332)
+.+...++|. ++.|.+ .|++..++|+|. |+.||+..
T Consensus 39 ~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~ 82 (634)
T 1yo8_A 39 THCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGN 82 (634)
T ss_dssp SSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEEC
T ss_pred CCccccccccCCCCcccCCccccceeeccCceecccCCCCcccC
Confidence 3456778998 345976 899999999999 99999864
No 416
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=75.97 E-value=1.2 Score=35.89 Aligned_cols=43 Identities=21% Similarity=0.529 Sum_probs=29.3
Q ss_pred CCCCCCCCCCCCCCccceeccCCCCceeeCCCCCCCCccccccccC
Q psy5806 1286 LTWNPCAQDNGGCSHLCFYKGRTKGYVCGCPDDLEPNEECFEGIQA 1331 (1332)
Q Consensus 1286 ~~~n~C~~~ng~C~~lC~~~~~~~~~~C~C~~~~~~~~~c~~~~~~ 1331 (1332)
...+||.. +|.|..+=-.. ...+|+|.|+.||.+. .|...|.|
T Consensus 11 C~s~pC~N-gGtC~~~~~~d-~~~~y~C~C~~g~~G~-~CE~~v~~ 53 (55)
T 3u7u_G 11 KEKTFCVN-GGECFMVKDLS-NPSRYLCKCPNEFTGD-RCQNYVMA 53 (55)
T ss_dssp TTTTTSCT-TCEEEEECCC---CCCEEEEECTTEEST-TSCEECCC
T ss_pred CcCCCCCC-CCCcCCCCccC-CCCCEeEeCCCCCcCC-CcCccCcc
Confidence 56789983 46664321112 1457999999999885 99988876
No 417
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=75.92 E-value=1.2e+02 Score=38.68 Aligned_cols=163 Identities=14% Similarity=0.035 Sum_probs=88.3
Q ss_pred cceEEEEEeCCC-cEEEEEeCCCCeEEEEECCCCCCceeEeecC-------CCCceeeEEEec-CCeEEEEcCC-C----
Q psy5806 1045 MSSIFFDYHYSK-NLIYFADMRSGNLRTFDMSDSTRIKPIPLMN-------DTIRDNFVIDWV-ANNIYYIDSQ-M---- 1110 (1332)
Q Consensus 1045 ~~~~~id~d~~~-~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~-------~~~p~glAvDw~-~~~LY~td~~-~---- 1110 (1332)
..+.+|++++.+ +.+|... ..+.|++.. + +...-.-+... ......||+|+. .+.||++-.. .
T Consensus 15 g~i~~i~~~p~~~~~~~a~~-~~ggv~rS~-D-gG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~ 91 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYART-DIGGAYRWD-A-GTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW 91 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEE-SSSCEEEEE-T-TTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC
T ss_pred CcEEEEEECCCCCCEEEEEe-cCCCEEEec-C-CCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc
Confidence 457899999875 5666654 455677766 4 44433322221 224678999963 4678887432 2
Q ss_pred ceEEEEeeCCceEEEEecCCC---------CceEEEEcCCCc-EEEEEecCCCCCCCCCcEEEEecCCCceEEEEec---
Q psy5806 1111 HTINVARSDGQHKKILVNDLM---------EPLAIAVYPRRG-LLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEE--- 1177 (1332)
Q Consensus 1111 ~~I~v~~ldG~~~~~~~~~~~---------~P~~iavdp~~g-~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~--- 1177 (1332)
..|.+..-.|+.=+.+...+. ....|+++|.+. .||... . ...|+|..=.|..-+.+...
T Consensus 92 ~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~-~------~~gl~~S~DgG~TW~~~~~~~~~ 164 (789)
T 1sqj_A 92 AAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT-R------TEGIWKSSDRAKTWTNVTSIPDA 164 (789)
T ss_dssp CEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC-S------SSCEEEESSTTSSCEEETTSCCC
T ss_pred cEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe-c------cCCEEEECCCCcccCCCccCccc
Confidence 455444333554333221111 235799999754 455433 1 14588776555544433210
Q ss_pred --CCCCcceEEEecC-CCEEEEEEcCCCeEEEEecCCCceEEE
Q psy5806 1178 --DLAFPNELAIDFK-QRRLFWADSTNKRIEYCDFFGRSRKIV 1217 (1332)
Q Consensus 1178 --~l~~p~glaiD~~-~~~LY~~d~~~~~I~~~d~dG~~~~~~ 1217 (1332)
.-.....|++|+. .+.||.+......|.+..=.|..-+.+
T Consensus 165 ~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~S~DgG~TW~~~ 207 (789)
T 1sqj_A 165 FTNGIGYTSVIFDPERNGTIYASATAPQGMYVTHDGGVSWEPV 207 (789)
T ss_dssp CSTTTCEEEEEECTTSTTCEEEEESSTTCEEEESSTTSSCEEC
T ss_pred cCCCCCeEEEEECCCCCCEEEEEEcCCCeEEEEcCCCcCcccC
Confidence 0012345778874 458888765435677654335554443
No 418
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=75.17 E-value=1.7e+02 Score=36.39 Aligned_cols=77 Identities=18% Similarity=-0.048 Sum_probs=41.4
Q ss_pred CcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecC-CCceEEEE-e---ecccceEEEecCCc
Q psy5806 1159 TKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFF-GRSRKIVI-S---KVAPYGLSVRQSPG 1233 (1332)
Q Consensus 1159 ~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~d-G~~~~~~~-~---~~~P~glav~~~~~ 1233 (1332)
+.|..+++......=-+...... .+-++...++.||.. +..+.|..+|.+ |+..-.+. . ...|...+
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~-~~g~~~tagglvf~g-t~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~------ 526 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIF-NGGTLSTAGNLVFEG-SADGRVIAYAADTGEKLWEQPAASGVMAAPVTYS------ 526 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSC-CCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE------
T ss_pred eeEEEEECCCCCeEeEccCCCCc-cCccceECCCEEEEE-CCCCcEEEEECCCCccceeeeCCCCcccCceEEE------
Confidence 45777777433221112222122 233566678888887 467889998876 54332222 1 24453332
Q ss_pred cccccEEEEEEC
Q psy5806 1234 KAFIVELYWTDW 1245 (1332)
Q Consensus 1234 ~~~~~~lYwtd~ 1245 (1332)
.++..|++-.
T Consensus 527 --~~G~qyv~~~ 536 (689)
T 1yiq_A 527 --VDGEQYVTFM 536 (689)
T ss_dssp --ETTEEEEEEE
T ss_pred --ECCEEEEEEE
Confidence 4567787754
No 419
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=75.08 E-value=1.6e+02 Score=35.90 Aligned_cols=75 Identities=8% Similarity=-0.079 Sum_probs=47.1
Q ss_pred eEEEecCCCEEEEEEc--------------------------------CCCeEEEEecC-CCceEEEEeec--ccceEEE
Q psy5806 1184 ELAIDFKQRRLFWADS--------------------------------TNKRIEYCDFF-GRSRKIVISKV--APYGLSV 1228 (1332)
Q Consensus 1184 glaiD~~~~~LY~~d~--------------------------------~~~~I~~~d~d-G~~~~~~~~~~--~P~glav 1228 (1332)
++++|++.+++|+... ..+.|..+|+. |+.+-..-... .--.++.
T Consensus 416 ~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t 495 (582)
T 1flg_A 416 PMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLAT 495 (582)
T ss_dssp CCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEE
T ss_pred CceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEe
Confidence 6788988888888642 24668888875 44322211111 1123555
Q ss_pred ecCCccccccEEEEEECCCCEEEEEEecCCCCcceEEEEec
Q psy5806 1229 RQSPGKAFIVELYWTDWEAMSVVIAREKSDTGQWDVHLIRS 1269 (1332)
Q Consensus 1229 ~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g~~~~~~~~~~~ 1269 (1332)
.++.||+.. ..+.++.+|..+| +.+-..+.
T Consensus 496 -------agglvf~g~-~dg~l~A~D~~tG---~~lW~~~~ 525 (582)
T 1flg_A 496 -------AGNLVFTGT-GDGYFKAFDAKSG---KELWKFQT 525 (582)
T ss_dssp -------TTTEEEEEC-TTSEEEEEETTTC---CEEEEEEC
T ss_pred -------CCCEEEEEC-CCCcEEEEECCCC---CEEEEecC
Confidence 788888876 5689999999888 55544443
No 420
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=74.61 E-value=1.2e+02 Score=34.40 Aligned_cols=105 Identities=10% Similarity=-0.040 Sum_probs=60.9
Q ss_pred cEEEEEeCCCCeEEEEECCCCCCcee-Eeec---CCCCceeeEEEec-------CCeEEEEcCCCceEEEEeeCCc-eEE
Q psy5806 1057 NLIYFADMRSGNLRTFDMSDSTRIKP-IPLM---NDTIRDNFVIDWV-------ANNIYYIDSQMHTINVARSDGQ-HKK 1124 (1332)
Q Consensus 1057 ~~lY~sd~~~~~I~~~~l~~g~~~~~-i~~~---~~~~p~glAvDw~-------~~~LY~td~~~~~I~v~~ldG~-~~~ 1124 (1332)
..+..+-...++|+..+++.+..... .+.. ..+....|++.+. .+++..+-...++|+++++... ...
T Consensus 101 ~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~ 180 (393)
T 4gq1_A 101 SLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPIL 180 (393)
T ss_dssp EEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceee
Confidence 33444444566777666553332221 1111 1235677888652 4566677777889999998643 333
Q ss_pred EEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecC
Q psy5806 1125 ILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLD 1167 (1332)
Q Consensus 1125 ~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ld 1167 (1332)
.+......+..++.+|..+.++.+-... +.|..-++.
T Consensus 181 ~~~~~~~~v~~v~~~p~~~~~l~~~~~d------~~v~~wd~~ 217 (393)
T 4gq1_A 181 AGYPLSSPGISVQFRPSNPNQLIVGERN------GNIRIFDWT 217 (393)
T ss_dssp EEEECSSCEEEEEEETTEEEEEEEEETT------SEEEEEETT
T ss_pred eecCCCCCcEEEEECCCCCceEEecCCC------CEEEEEECC
Confidence 3444446778999999766666664333 445555553
No 421
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=73.81 E-value=1.7 Score=34.65 Aligned_cols=34 Identities=18% Similarity=0.650 Sum_probs=23.5
Q ss_pred cccCCCC-cceeeeccCCCceEEeCCCCceecCCCCCcC
Q psy5806 393 QSHCAPK-VCSHICLPNKHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 393 ~n~C~~g-~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
.+||.|| .|..+=....++|+|.|+.||+ |..|+
T Consensus 13 ~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~----G~~Ce 47 (52)
T 3ca7_A 13 AWYCLNDAHCFAVKIADLPVYSCECAIGFM----GQRCE 47 (52)
T ss_dssp HHTSCTTCEEEEEEETTEEEEEEECCTTEE----STTSC
T ss_pred CCcCCCCCEEecCccCCCCCEEEECCCCCc----CCCCc
Confidence 5789975 4654311234589999999998 56784
No 422
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=73.64 E-value=1.1e+02 Score=36.98 Aligned_cols=195 Identities=8% Similarity=-0.018 Sum_probs=119.9
Q ss_pred CCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEE--ecCCeEEEEcCC------Cce-E---------EEE
Q psy5806 1055 SKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVID--WVANNIYYIDSQ------MHT-I---------NVA 1116 (1332)
Q Consensus 1055 ~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvD--w~~~~LY~td~~------~~~-I---------~v~ 1116 (1332)
.+++||+-|-.+.+|-|++|+.-.-.+++...+.....|+++. +.++.++....- .++ + ...
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~ 220 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYN 220 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEE
Confidence 3578999998999999999985444444444556678999998 356666543211 001 1 112
Q ss_pred eeCCceEEEEec---CCCCceEEEEcCCCcEEEEEecCCCC--------CCCCCcEEEEec---------------CC--
Q psy5806 1117 RSDGQHKKILVN---DLMEPLAIAVYPRRGLLFYSHWGLYD--------NSPTTKIEKVYL---------------DG-- 1168 (1332)
Q Consensus 1117 ~ldG~~~~~~~~---~~~~P~~iavdp~~g~Lywtd~~~~~--------~~~~~~I~r~~l---------------dG-- 1168 (1332)
.+|+...++.+. . ..+....-++..++.|+|-.+..- .+....+...+. +|
T Consensus 221 ~iD~~tm~v~~Qv~v~-gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~g 299 (638)
T 3sbq_A 221 AIDAETMEMAFQVIVD-GNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSK 299 (638)
T ss_dssp EEETTTCSEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCC
T ss_pred EEcCCccEEEEEEEcC-CChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCC
Confidence 233332222111 1 134456668888888888543210 001112222222 21
Q ss_pred ------C-------ceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEEecCC----------CceEEEE-e---ec
Q psy5806 1169 ------S-------YRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYCDFFG----------RSRKIVI-S---KV 1221 (1332)
Q Consensus 1169 ------~-------~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~d~dG----------~~~~~~~-~---~~ 1221 (1332)
+ ..+-.+.. -..|.|+-++++++.+|.+.....++..++++- ..+.+++ . +.
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~-pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPV-PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEE-SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred eeEEccccccccCCceEEEEeC-CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 1 11122221 256999999999999999999999999999862 1223333 2 88
Q ss_pred ccceEEEecCCccccccEEEEEECCCCEEEEEEecC
Q psy5806 1222 APYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKS 1257 (1332)
Q Consensus 1222 ~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~ 1257 (1332)
.|.-.++ +.+|+.|-|-.-...|.+.+...
T Consensus 379 GPlHt~F------d~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 379 GPLHTTF------DGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp CEEEEEE------CSSSEEEEEETTTTEEEEEEHHH
T ss_pred cccEEEE------CCCCceEeeeeecceEEEEeccH
Confidence 9999999 45679999999999999987653
No 423
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=73.08 E-value=1.8e+02 Score=35.60 Aligned_cols=67 Identities=7% Similarity=0.008 Sum_probs=39.6
Q ss_pred CcEEEEEeCCCCeEEEEEC-CCCCCceeEeecCC----------CCceeeEEEecCCe----EEEEcCCCceEEEEee-C
Q psy5806 1056 KNLIYFADMRSGNLRTFDM-SDSTRIKPIPLMND----------TIRDNFVIDWVANN----IYYIDSQMHTINVARS-D 1119 (1332)
Q Consensus 1056 ~~~lY~sd~~~~~I~~~~l-~~g~~~~~i~~~~~----------~~p~glAvDw~~~~----LY~td~~~~~I~v~~l-d 1119 (1332)
+++||+.....+.|+.+++ .+|...-..-.... ....|+++.+..+. ||+... .+++..++. +
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-dg~l~AlDa~T 140 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-DGNVAALNAET 140 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-TSEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-CCEEEEEECCC
Confidence 5788888643567888887 55554433221110 11357888322566 998864 457778886 4
Q ss_pred CceE
Q psy5806 1120 GQHK 1123 (1332)
Q Consensus 1120 G~~~ 1123 (1332)
|+.+
T Consensus 141 G~~~ 144 (599)
T 1w6s_A 141 GETV 144 (599)
T ss_dssp CCEE
T ss_pred CCEE
Confidence 7654
No 424
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=72.94 E-value=25 Score=42.93 Aligned_cols=107 Identities=17% Similarity=0.178 Sum_probs=69.5
Q ss_pred cccceeEEeecCCCceEEEEecC---------------------CCceEEEecCCCCc-------eEEEe----------
Q psy5806 737 QLKMVASVDVDTKNEYIYWSDIS---------------------EKTIERVRFDMTGR-------ERLVV---------- 778 (1332)
Q Consensus 737 ~~~~~~~id~d~~~~~lYwsD~~---------------------~~~I~r~~~~g~~~-------~~vi~---------- 778 (1332)
.+..+..+.+++.++.||++-+. .+.|+|+..++... +.++.
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 46678889999999999997542 35688887643221 12221
Q ss_pred -----------CCCCCccceeEecCCCeEEEE-eCC-----------CCeEEEEeCC-CCceEEEEecCCCCCeEEEEeC
Q psy5806 779 -----------NDLNRTESIAVDAIGRKIYWT-DMN-----------AQTIMVSDID-GKNAKVLFWLNLYRPRSIVVHY 834 (1332)
Q Consensus 779 -----------~~~~~p~glAvD~~~~nLYwt-D~~-----------~~~I~v~~ld-G~~~~~l~~~~~~~P~~Iavdp 834 (1332)
+.+.+|.+|+||..++ ||+. |.. ++.+.+.... |+.++.+.-..-....|+++.|
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fsp 540 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP 540 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT
T ss_pred ccccccccCCCCCccCCcceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECC
Confidence 1267899999998776 7776 543 3456666664 5544444322224577899999
Q ss_pred CCCeEEEEec
Q psy5806 835 GLGLMVWADW 844 (1332)
Q Consensus 835 ~~g~lywtd~ 844 (1332)
....||+.-.
T Consensus 541 Dg~tlfvniQ 550 (592)
T 3zwu_A 541 DQKTLFVGIQ 550 (592)
T ss_dssp TSSEEEEEEE
T ss_pred CCCEEEEEEE
Confidence 8778888753
No 425
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=72.67 E-value=1.9 Score=41.98 Aligned_cols=30 Identities=33% Similarity=0.801 Sum_probs=25.4
Q ss_pred ccccCC--CCccee--eeccCCCceEEeCCCCce
Q psy5806 392 YQSHCA--PKVCSH--ICLPNKHRFTCQCPLGLT 421 (1332)
Q Consensus 392 ~~n~C~--~g~Csh--lCl~~~~~~~C~C~~G~~ 421 (1332)
+.++|+ ...|.+ .|++..++|+|.|+.||+
T Consensus 4 dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~ 37 (135)
T 2vj3_A 4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYT 37 (135)
T ss_dssp CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEE
T ss_pred ccccccCCCCCCCCCCEeECCCCCEEEECCCCCc
Confidence 467787 567876 899999999999999997
No 426
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=72.03 E-value=1e+02 Score=38.84 Aligned_cols=192 Identities=17% Similarity=0.070 Sum_probs=101.7
Q ss_pred ceEEEEEeCCC-cEEEEEeCCCCeEEEEECCCCCCceeEeecCC-------CCceeeEEEec-CCeEEEEcCC-------
Q psy5806 1046 SSIFFDYHYSK-NLIYFADMRSGNLRTFDMSDSTRIKPIPLMND-------TIRDNFVIDWV-ANNIYYIDSQ------- 1109 (1332)
Q Consensus 1046 ~~~~id~d~~~-~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~-------~~p~glAvDw~-~~~LY~td~~------- 1109 (1332)
.+.+|++++.+ +.||..- ..+.|+|.. + +...-..+.... .....|++|+. .+.||++-..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~-~~ggv~rS~-D-~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~ 100 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARA-AIGGAYRWD-P-STETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLP 100 (737)
T ss_dssp CCCEEEECSSSTTCEEEEC-SSSCEEEEE-T-TTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSC
T ss_pred eeeEEEECCCCCCEEEEEe-cCCcEEEeC-C-CCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEeccccccccc
Confidence 56789999876 5666643 456788876 4 333333222211 24678999974 5789987532
Q ss_pred -CceEEEEeeCCceEEEEecCC----C-----CceEEEEcCCC-cEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecC
Q psy5806 1110 -MHTINVARSDGQHKKILVNDL----M-----EPLAIAVYPRR-GLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEED 1178 (1332)
Q Consensus 1110 -~~~I~v~~ldG~~~~~~~~~~----~-----~P~~iavdp~~-g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~ 1178 (1332)
...|.+..=.|+.=+.+...+ . ....|+++|.+ +.||...... ..|+|..=.|..-+.+ . .
T Consensus 101 ~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g------~gl~~S~DgG~tW~~~-~-~ 172 (737)
T 2cn3_A 101 NMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCG------NGLWRSTDYGVTWSKV-E-S 172 (737)
T ss_dssp CCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTT------CCEEEESSTTSSCEEC-T-T
T ss_pred CCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccC------CcEEEeCCCCcceecc-c-C
Confidence 234433322354322221111 1 12579999976 5677664221 3488765555443332 1 1
Q ss_pred CC-------Cc-----------ceEEEecCC-------CEEEEEEcCC-CeEEEEecC-CCceEEEEe---ecccceEEE
Q psy5806 1179 LA-------FP-----------NELAIDFKQ-------RRLFWADSTN-KRIEYCDFF-GRSRKIVIS---KVAPYGLSV 1228 (1332)
Q Consensus 1179 l~-------~p-----------~glaiD~~~-------~~LY~~d~~~-~~I~~~d~d-G~~~~~~~~---~~~P~glav 1228 (1332)
+. .| ..+++|+.. ++||.+.... ..|.+. .| |..-+.+.. ...|..+++
T Consensus 173 ~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S-~DgG~tW~~~~~~p~~~~~~~~~~ 251 (737)
T 2cn3_A 173 FPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRS-TDGGVTWKAVPGQPKGLLPHHGVL 251 (737)
T ss_dssp CCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEE-SSTTSCCEECTTCCCSSEEEEEEE
T ss_pred CCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEE-cCCCCceEECCCCCCcccceEEEE
Confidence 11 01 237787753 4899986543 247665 55 454443322 222333445
Q ss_pred ecCCccccccEEEEEEC---------CCCEEEEEEe
Q psy5806 1229 RQSPGKAFIVELYWTDW---------EAMSVVIARE 1255 (1332)
Q Consensus 1229 ~~~~~~~~~~~lYwtd~---------~~~~V~~~~~ 1255 (1332)
+..+.||++-. ..+.|+|.+.
T Consensus 252 ------~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d 281 (737)
T 2cn3_A 252 ------ASNGMLYITYGDTCGPYDGNGKGQVWKFNT 281 (737)
T ss_dssp ------CTTSEEEEEEESSCCSSCCSCCEEEEEEET
T ss_pred ------CCCCeEEEEecCCCCccccccCceEEEEeC
Confidence 12667777532 3456777664
No 427
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=71.32 E-value=2 Score=38.64 Aligned_cols=23 Identities=43% Similarity=1.019 Sum_probs=19.3
Q ss_pred eeccCC--CceEEeCCCCceecCCCCCcC
Q psy5806 404 ICLPNK--HRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 404 lCl~~~--~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
.|++.. ++|+|.||.||. |+.|.
T Consensus 61 ~C~~~~~~~~~~C~C~~G~~----G~~Ce 85 (91)
T 1tpg_A 61 TCQQALYFSDFVCQCPEGFA----GKSCE 85 (91)
T ss_dssp EEEEESSSSCEEEECCTTCB----SSSCC
T ss_pred EeecCCCCCCeEeECCCCCc----CCcCC
Confidence 677766 899999999996 67885
No 428
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=71.00 E-value=1.9e+02 Score=36.65 Aligned_cols=163 Identities=9% Similarity=0.028 Sum_probs=89.6
Q ss_pred ceEEEEEeCCC-cEEEEEeCC-C----CeEEEEECCCCCCceeEeecCCC---------CceeeEEEecC-CeEEEEcCC
Q psy5806 1046 SSIFFDYHYSK-NLIYFADMR-S----GNLRTFDMSDSTRIKPIPLMNDT---------IRDNFVIDWVA-NNIYYIDSQ 1109 (1332)
Q Consensus 1046 ~~~~id~d~~~-~~lY~sd~~-~----~~I~~~~l~~g~~~~~i~~~~~~---------~p~glAvDw~~-~~LY~td~~ 1109 (1332)
.+.+|++++.+ ++||++-.. . +.|++-. + +...-..+..... ....||+++.. +.||+...
T Consensus 65 ~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~-D-gG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~- 141 (789)
T 1sqj_A 65 GTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSE-D-RGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTR- 141 (789)
T ss_dssp SEEEEEEETTEEEEEEEEECSCTTSSCCEEEEES-S-TTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECS-
T ss_pred ceeEEEECCCCCCEEEEEeCccCCCcccEEEEEC-C-CCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEec-
Confidence 46788889754 677776432 2 5666653 4 4444333322111 23579999754 56666542
Q ss_pred CceEEEEeeC-CceEEEEec------CCCCceEEEEcCCCc-EEEEEecCCCCCCCCCcEEEEecCCCceEEEEe--cCC
Q psy5806 1110 MHTINVARSD-GQHKKILVN------DLMEPLAIAVYPRRG-LLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVE--EDL 1179 (1332)
Q Consensus 1110 ~~~I~v~~ld-G~~~~~~~~------~~~~P~~iavdp~~g-~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~--~~l 1179 (1332)
...|.+ ..| |+.=+.+.. .......|+++|.++ .||.+.... ..|+|..=.|..-+.+.. ...
T Consensus 142 ~~gl~~-S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~------~~v~~S~DgG~TW~~~~~~~~~~ 214 (789)
T 1sqj_A 142 TEGIWK-SSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP------QGMYVTHDGGVSWEPVAGQPSSW 214 (789)
T ss_dssp SSCEEE-ESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST------TCEEEESSTTSSCEECTTCCCSC
T ss_pred cCCEEE-ECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC------CeEEEEcCCCcCcccCCCCcCcc
Confidence 344533 334 443222211 012346788998654 787776531 357776544443333211 010
Q ss_pred ---------------CCcceEEEecCCCEEEEEE--------cCCCeEEEEecCCCceEEEE
Q psy5806 1180 ---------------AFPNELAIDFKQRRLFWAD--------STNKRIEYCDFFGRSRKIVI 1218 (1332)
Q Consensus 1180 ---------------~~p~glaiD~~~~~LY~~d--------~~~~~I~~~d~dG~~~~~~~ 1218 (1332)
..|..|++++..++||.+- ...+.|.+.+-.|..-+.+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW~~~~ 276 (789)
T 1sqj_A 215 LNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDIT 276 (789)
T ss_dssp CHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEETTTCCEEECC
T ss_pred ccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEeCCCCceEECc
Confidence 1136788988788999883 25667888776676655543
No 429
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=70.68 E-value=3 Score=33.25 Aligned_cols=33 Identities=21% Similarity=0.587 Sum_probs=22.8
Q ss_pred CCCCCCCCCCCccce--eccCCCCceeeCCCCCCCCccccccc
Q psy5806 1289 NPCAQDNGGCSHLCF--YKGRTKGYVCGCPDDLEPNEECFEGI 1329 (1332)
Q Consensus 1289 n~C~~~ng~C~~lC~--~~~~~~~~~C~C~~~~~~~~~c~~~~ 1329 (1332)
|||.. +| .|+ .. .++++|.|+.||.+. .|...+
T Consensus 12 ~pC~n-gg----~C~~~~~--~~~~~C~C~~G~~G~-~Ce~~~ 46 (53)
T 1egf_A 12 GYCLN-GG----VCMHIES--LDSYTCNCVIGYSGD-RCQTRD 46 (53)
T ss_dssp CSSCS-SC----EEEEESS--SSCEEEECCTTCCSS-SSCCCS
T ss_pred CcCCC-Cc----EEEeeCC--CCCEEEECCCCCcCC-cCCccC
Confidence 57773 23 566 33 467999999999874 886544
No 430
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=69.47 E-value=5 Score=46.24 Aligned_cols=176 Identities=11% Similarity=0.025 Sum_probs=73.7
Q ss_pred CcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCcee-eEEEecCCeEEEEcCCCceEEEEee-CCceEEEEecC----
Q psy5806 1056 KNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDN-FVIDWVANNIYYIDSQMHTINVARS-DGQHKKILVND---- 1129 (1332)
Q Consensus 1056 ~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~g-lAvDw~~~~LY~td~~~~~I~v~~l-dG~~~~~~~~~---- 1129 (1332)
+++||+.. ..+.|+.+++.+|........ +.+.. -+++ .+.+|++....+.|..++. +|+........
T Consensus 9 ~~~v~~gs-~dg~v~a~d~~tG~~~W~~~~---~~~~s~p~~~--~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 9 ETLLFVST-LDGSLHAVSKRTGSIKWTLKE---DPVLQVPTHV--EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp TTEEEEEE-TTSEEEEEETTTCCEEEEEEC---CCSCCCC-------CCEEECTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred CCEEEEEc-CCCEEEEEECCCCCEEEEecC---CCceecceEc--CCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc
Confidence 46677765 456777777665544433322 11111 2233 4567777666778888887 46543321100
Q ss_pred -CCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecC-CCceEEEEecCCCCcceEEEecCCCEEEEEEcCCCeEEEE
Q psy5806 1130 -LMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLD-GSYRTVLVEEDLAFPNELAIDFKQRRLFWADSTNKRIEYC 1207 (1332)
Q Consensus 1130 -~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ld-G~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~~~~I~~~ 1207 (1332)
...| ++. ..+.||+.... +.|+..+.. |+.+..+-. +......+.+++||... ..+.|...
T Consensus 83 ~~~sp---~~~-~~~~v~~g~~d-------g~v~a~D~~tG~~~w~~~~-----~~~~~~~p~~~~v~~~~-~dg~v~a~ 145 (369)
T 2hz6_A 83 VQASP---CRS-SDGILYMGKKQ-------DIWYVIDLLTGEKQQTLSS-----AFADSLSPSTSLLYLGR-TEYTITMY 145 (369)
T ss_dssp HTTCS---CC------CCCCEEE-------EEEEEECCC---------------------------EEEEE-EEEEEECC
T ss_pred cccCc---eEe-cCCEEEEEeCC-------CEEEEEECCCCcEEEEecC-----CCcccccccCCEEEEEe-cCCEEEEE
Confidence 0122 111 24566654322 356666664 433222211 11122223677888874 44678888
Q ss_pred ecC-CCceEEEEeecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1208 DFF-GRSRKIVISKVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1208 d~d-G~~~~~~~~~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
|.. |..+-.+-.. ...+.++ +.+..+++.+|+... .+.|+.+|..+|
T Consensus 146 d~~tG~~~W~~~~~-~~~~~~~--~~~~~~~~~v~~~~~-dg~v~a~d~~tG 193 (369)
T 2hz6_A 146 DTKTRELRWNATYF-DYAASLP--EDDVDYKMSHFVSNG-DGLVVTVDSESG 193 (369)
T ss_dssp CSSSSSCCCEEEEE-EECCBCC--CCCTTCCCCEEEEET-SCEEEEECTTTC
T ss_pred ECCCCCEEEeEecc-cccCccc--cCCccccceEEEECC-CCEEEEEECCCC
Confidence 874 5432222110 1122333 000012367887764 578888888887
No 431
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=68.52 E-value=2.3 Score=43.95 Aligned_cols=34 Identities=24% Similarity=0.691 Sum_probs=26.6
Q ss_pred ccCCCCcc---eeeeccCCCceEEeCCCCceecCCCCC
Q psy5806 394 SHCAPKVC---SHICLPNKHRFTCQCPLGLTLSPDNKS 428 (1332)
Q Consensus 394 n~C~~g~C---shlCl~~~~~~~C~C~~G~~L~~d~~t 428 (1332)
++|.+ .| ...|++..++|+|.|+.||++..+.+.
T Consensus 140 ~~C~~-~C~~~~~~C~n~~g~y~C~C~~G~~g~~~~~~ 176 (186)
T 1z1y_A 140 TACQL-XCNTDNEVCXNVEGVYXCQCMEGFTFDXEXNV 176 (186)
T ss_dssp CCCCC-CCCTTTEEEEEETTEEEEEECTTCEEETTTTE
T ss_pred Ccccc-cccccCcceecCCCCeeeECCCCCccCccccc
Confidence 55653 56 468999999999999999998765543
No 432
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=68.32 E-value=1.7 Score=48.31 Aligned_cols=41 Identities=24% Similarity=0.762 Sum_probs=32.3
Q ss_pred CCcccCCCC---CCccccccCCCCccccCCCCeeEccCCccccc
Q psy5806 969 PNACGSNNG---GCSHLCLRNPTNFTCACPTGILLSADRRSCFS 1009 (1332)
Q Consensus 969 ~n~C~~~nG---gCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~ 1009 (1332)
.+.|...++ .|+|.|..+++++.|.|..||.|..++.+|..
T Consensus 120 ~~~C~~~~~~~~~c~~~C~n~~g~~~csC~~Gy~L~~d~~~C~~ 163 (286)
T 1nt0_A 120 VDECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQNKHTCSA 163 (286)
T ss_dssp CCTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred CCccCCCCCCcccCCCccccccCceEeecCCCceeccCCCCccc
Confidence 345665443 59999999999999999999999999999874
No 433
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=67.92 E-value=1e+02 Score=39.12 Aligned_cols=165 Identities=13% Similarity=0.012 Sum_probs=89.4
Q ss_pred cCCccceEEEEEeCCC-cEEEEEeCCCCeEEEEECCCCCCceeEeecC------------CCCceeeEEEec-CCeEEEE
Q psy5806 1041 FPEYMSSIFFDYHYSK-NLIYFADMRSGNLRTFDMSDSTRIKPIPLMN------------DTIRDNFVIDWV-ANNIYYI 1106 (1332)
Q Consensus 1041 i~~~~~~~~id~d~~~-~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~------------~~~p~glAvDw~-~~~LY~t 1106 (1332)
|.+...+.+|.+++.+ +.+|+. ...+.|++.. + +...-.-+... ......||+|+. .+.||++
T Consensus 17 ~g~~g~i~~i~~~p~~~~~~y~~-~~~ggv~~S~-D-gG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~ 93 (763)
T 3a0f_A 17 ISGGGFISGLVAHPTEKDLIYAR-TDIGGTYRWN-A-AKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLA 93 (763)
T ss_dssp CCBCSCEEEEEECSSSTTCEEEE-ESSSCEEEEE-T-TTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEE
T ss_pred ecCCCceeEEEeCCCCCCEEEEE-eccCcEEEEC-C-CCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEE
Confidence 3445568899999987 455555 4556677765 4 44332222221 224678999974 4778886
Q ss_pred cCC------CceEEEEeeCCceEEEEecCC-------CCc--eEEEEcCCC-cEEEEEecCCCCCCCCCcEEEEecCCCc
Q psy5806 1107 DSQ------MHTINVARSDGQHKKILVNDL-------MEP--LAIAVYPRR-GLLFYSHWGLYDNSPTTKIEKVYLDGSY 1170 (1332)
Q Consensus 1107 d~~------~~~I~v~~ldG~~~~~~~~~~-------~~P--~~iavdp~~-g~Lywtd~~~~~~~~~~~I~r~~ldG~~ 1170 (1332)
... ...|.+..=.|+.=+.+...+ .+. ..|+|+|.+ +.+|.... ...|+|..=.|..
T Consensus 94 ~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~-------~~~l~~S~DgG~T 166 (763)
T 3a0f_A 94 QGDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSR-------TQGLWRSTDRAQT 166 (763)
T ss_dssp ECSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECS-------SSCEEEESSTTSS
T ss_pred ecccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeC-------CCcEEEECCCCcC
Confidence 432 344543332354322221111 112 369999864 56766532 2458877544544
Q ss_pred eEEEEecCCC-------CcceEEEecCC-CEEEEEEcCCCeEEEEecCCCceEEE
Q psy5806 1171 RTVLVEEDLA-------FPNELAIDFKQ-RRLFWADSTNKRIEYCDFFGRSRKIV 1217 (1332)
Q Consensus 1171 ~~~l~~~~l~-------~p~glaiD~~~-~~LY~~d~~~~~I~~~d~dG~~~~~~ 1217 (1332)
-+.+ . .+. ....|++|+.+ ++||++-...+.|.+..=.|..-+.+
T Consensus 167 W~~~-~-~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~S~DgG~tW~~~ 219 (763)
T 3a0f_A 167 WSRM-N-QLPDSSTYGIGIISVIFDPKNVGTAYVASHAVGGLWVTWDGGANWSQV 219 (763)
T ss_dssp CEEC-T-TSCCCSCTTTCEEEEEECSSSTTCEEEEESSTTCEEEESSSSSSCEEC
T ss_pred cccc-c-cCcccCCCccceEEEEECCCCCCEEEEEEeCCCeEEEECCCCCCcccc
Confidence 3333 2 111 12356788754 57998865443577664446654443
No 434
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=67.19 E-value=3.5 Score=30.34 Aligned_cols=32 Identities=34% Similarity=0.748 Sum_probs=22.1
Q ss_pred CCCCCCCCCCCCCccceeccCCCCceeeCCCCCCCCcccc
Q psy5806 1287 TWNPCAQDNGGCSHLCFYKGRTKGYVCGCPDDLEPNEECF 1326 (1332)
Q Consensus 1287 ~~n~C~~~ng~C~~lC~~~~~~~~~~C~C~~~~~~~~~c~ 1326 (1332)
..+||.. +| .|+.. .++++|.|+.||.+. .|.
T Consensus 7 ~~~pC~n-gg----~C~~~--~~~~~C~C~~G~~G~-~Ce 38 (39)
T 1edm_B 7 ESNPCLN-GG----SCKDD--INSYECWCPFGFEGK-NCE 38 (39)
T ss_dssp TTCCCCT-TC----EEEEE--TTEEEEECCTTCCST-TSC
T ss_pred CCCCCCC-CC----EeEcC--CCceEeECCCCCcCC-ccC
Confidence 4567763 23 56655 467999999999864 673
No 435
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=67.09 E-value=2.8 Score=32.10 Aligned_cols=34 Identities=18% Similarity=0.470 Sum_probs=22.6
Q ss_pred CCCCCCCCCCCcccee-ccCCCCceeeCCCCCCCCccccccc
Q psy5806 1289 NPCAQDNGGCSHLCFY-KGRTKGYVCGCPDDLEPNEECFEGI 1329 (1332)
Q Consensus 1289 n~C~~~ng~C~~lC~~-~~~~~~~~C~C~~~~~~~~~c~~~~ 1329 (1332)
+||.. +| .|.. . ..++++|.|+.||.+. .|...|
T Consensus 9 ~pC~n-gg----~C~~~~-~~~~~~C~C~~G~~G~-~Ce~~~ 43 (45)
T 1a3p_A 9 GYCLN-GG----VXMHIE-SLDSYTCNCVIGYSGD-RCQTRD 43 (45)
T ss_dssp SCCSS-SC----EEEECT-TTSSEEEECCTTEETT-TTCEEC
T ss_pred CCCCC-CC----EEEeec-CCCCEEEEcCCCCcCC-cCCccc
Confidence 47773 23 4652 2 1467999999999874 886554
No 436
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=66.86 E-value=1.9 Score=47.74 Aligned_cols=42 Identities=26% Similarity=0.695 Sum_probs=33.7
Q ss_pred CCcccCCC---CCCccccccCCCCccccCCCCeeEccCCcccccc
Q psy5806 969 PNACGSNN---GGCSHLCLRNPTNFTCACPTGILLSADRRSCFSR 1010 (1332)
Q Consensus 969 ~n~C~~~n---GgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~~ 1010 (1332)
.+.|...+ .+|.|.|...++++.|.|+.||.|..|.++|...
T Consensus 121 ~~~C~~~~~~~~~c~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 165 (278)
T 3dem_A 121 VDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVE 165 (278)
T ss_dssp CCTTTC-----CCCSSEEEEETTEEEEECCTTCEECTTSSCEECC
T ss_pred cccCCCCCCCcccCCcCcCCccCCcEEEeCCcceeccCCCCCccc
Confidence 34565543 4899999999999999999999999999999743
No 437
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=65.24 E-value=1.6e+02 Score=35.16 Aligned_cols=194 Identities=7% Similarity=-0.105 Sum_probs=101.7
Q ss_pred eEEEEEeCC-----CcEEEEEeCCCCeEEEEECCCCCCce----------eEeecCCCCceeeEEEecCCeEEEEcCCCc
Q psy5806 1047 SIFFDYHYS-----KNLIYFADMRSGNLRTFDMSDSTRIK----------PIPLMNDTIRDNFVIDWVANNIYYIDSQMH 1111 (1332)
Q Consensus 1047 ~~~id~d~~-----~~~lY~sd~~~~~I~~~~l~~g~~~~----------~i~~~~~~~p~glAvDw~~~~LY~td~~~~ 1111 (1332)
+..++|.+. ++.+..+-...++|+..++..+.... ..+.........+++.. .+ ..++-...+
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~~-~lasgs~Dg 287 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-PT-TVVCGFKNG 287 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-SS-EEEEEETTS
T ss_pred EEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-CC-eEEEEeCCC
Confidence 456666664 12344444467788888876432110 01111123445555543 33 445556678
Q ss_pred eEEEEeeC-CceE-EEEecCCCCceEEE-EcCCCc-EEEEEecCCCCCCCCCcEEEEecCCCc-eEEEEec-CCCCcceE
Q psy5806 1112 TINVARSD-GQHK-KILVNDLMEPLAIA-VYPRRG-LLFYSHWGLYDNSPTTKIEKVYLDGSY-RTVLVEE-DLAFPNEL 1185 (1332)
Q Consensus 1112 ~I~v~~ld-G~~~-~~~~~~~~~P~~ia-vdp~~g-~Lywtd~~~~~~~~~~~I~r~~ldG~~-~~~l~~~-~l~~p~gl 1185 (1332)
.|.++++. +... ..+..-.....+|+ ..+..| .++.|-... ..|..-++.... ...+... .......+
T Consensus 288 tV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D------~tvklWD~~~~~~~~~~~~~~~~~~v~~v 361 (524)
T 2j04_B 288 FVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD------GYFYIFNPKDIATTKTTVSRFRGSNLVPV 361 (524)
T ss_dssp EEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT------SEEEEECGGGHHHHCEEEEECSCCSCCCE
T ss_pred EEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccC------CeEEEEECCCCCcccccccccccCcccce
Confidence 99999997 4332 23433334567784 334456 676775443 456666664322 2223221 11124578
Q ss_pred EEecCCCEEEEEEcCCCeEEEEecCC-CceEEEEe-ecccceEEEecCCccccccEEEEEECCCCEEEEEEe
Q psy5806 1186 AIDFKQRRLFWADSTNKRIEYCDFFG-RSRKIVIS-KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIARE 1255 (1332)
Q Consensus 1186 aiD~~~~~LY~~d~~~~~I~~~d~dG-~~~~~~~~-~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~ 1255 (1332)
++.++.+. +.+-...+.|...|+.. .....+.. .....+|++ |+ .+. ++.+-...++|...+.
T Consensus 362 ~fsp~~~~-l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~--Sp---~g~-~l~Sgs~Dgtv~lwd~ 426 (524)
T 2j04_B 362 VYCPQIYS-YIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGV--SR---LHP-MVLAGSADGSLIITNA 426 (524)
T ss_dssp EEETTTTE-EEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEEC--CS---SCC-BCEEEETTTEEECCBS
T ss_pred EeCCCcCe-EEEeCCCCcEEEEECcccccceeeecCCCceEEEEe--CC---CCC-eEEEEECCCEEEEEec
Confidence 89887665 44545666788878754 33344433 455567777 22 222 3344445666665553
No 438
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=64.22 E-value=1.6 Score=36.02 Aligned_cols=19 Identities=21% Similarity=0.745 Sum_probs=17.0
Q ss_pred ccccCCCCccccCCCCeeE
Q psy5806 982 LCLRNPTNFTCACPTGILL 1000 (1332)
Q Consensus 982 lCl~~p~~~~C~Cp~g~~l 1000 (1332)
.|..++++|+|.||.||.+
T Consensus 26 tC~~~~g~y~C~C~~Gy~~ 44 (61)
T 2k2s_B 26 TCKETNSGYICRCNQGYRI 44 (61)
T ss_dssp EEEECSSEEEEECCTTEEE
T ss_pred ccccCCCceEeECCCCCcc
Confidence 5888899999999999984
No 439
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=63.15 E-value=4 Score=39.86 Aligned_cols=36 Identities=22% Similarity=0.683 Sum_probs=26.6
Q ss_pred ccccCCCCcce--eeeccCCCceEEeCCCCceecCCCCCcCC
Q psy5806 392 YQSHCAPKVCS--HICLPNKHRFTCQCPLGLTLSPDNKSCSE 431 (1332)
Q Consensus 392 ~~n~C~~g~Cs--hlCl~~~~~~~C~C~~G~~L~~d~~tC~~ 431 (1332)
..++|....|. ..|++..++|+|.|+.||+ |+.|..
T Consensus 96 ~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~----G~~c~~ 133 (143)
T 4d90_A 96 NINECEVEPCKNGGICTDLVANYSCECPGEFM----GRNCQY 133 (143)
T ss_dssp ECCTTTTCCSCTTCEEEEETTEEEEECCTTCB----STTSCB
T ss_pred CCCcCCCCCCCCCCEeECCCCCeEeECCCCCc----cCCcee
Confidence 35666655554 4889999999999999997 445643
No 440
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=63.03 E-value=3.8 Score=50.38 Aligned_cols=33 Identities=21% Similarity=0.524 Sum_probs=29.1
Q ss_pred CCcccCCCCCCcc-----ccccCCCCcccc-CCCCeeEc
Q psy5806 969 PNACGSNNGGCSH-----LCLRNPTNFTCA-CPTGILLS 1001 (1332)
Q Consensus 969 ~n~C~~~nGgCsh-----lCl~~p~~~~C~-Cp~g~~l~ 1001 (1332)
.++|+.++++|.+ .|..++++|+|. |+.||...
T Consensus 44 iDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~ 82 (634)
T 1yo8_A 44 LDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGN 82 (634)
T ss_dssp CCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEEC
T ss_pred cccccCCCCcccCCccccceeeccCceecccCCCCcccC
Confidence 6889888888976 899999999999 99999864
No 441
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=61.50 E-value=6.5 Score=30.93 Aligned_cols=33 Identities=21% Similarity=0.622 Sum_probs=24.7
Q ss_pred ccccCCCCcceeeeccCCCceEEeCCCCceecCCCCCcC
Q psy5806 392 YQSHCAPKVCSHICLPNKHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 392 ~~n~C~~g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
..+.|.||.|-.+ ...+.++|.|+.||. |.+|+
T Consensus 12 ~~~yC~nG~C~~~--~~~~~~~C~C~~gy~----G~RCe 44 (50)
T 1iox_A 12 YKHYCIKGRCRFV--VAEQTPSCVCDEGYI----GARCE 44 (50)
T ss_dssp GTTSCTTCCEEEE--TTTTEEEECCCTTEE----TTTTC
T ss_pred hcCcccCCEEEeE--cCCCCeEEECCCCcc----cCCCC
Confidence 3578888877553 445689999999997 66784
No 442
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=59.57 E-value=4.6 Score=33.42 Aligned_cols=42 Identities=19% Similarity=0.464 Sum_probs=25.7
Q ss_pred CCCCCCCCCCCCCCccceeccCCCCceeeCCCCCCCCcccccccc
Q psy5806 1286 LTWNPCAQDNGGCSHLCFYKGRTKGYVCGCPDDLEPNEECFEGIQ 1330 (1332)
Q Consensus 1286 ~~~n~C~~~ng~C~~lC~~~~~~~~~~C~C~~~~~~~~~c~~~~~ 1330 (1332)
...|||.. +|.|..+.-... .++++|.|+.||.+. .|...|.
T Consensus 9 C~~~pC~n-gG~C~~~~~~~~-~~~y~C~C~~Gf~G~-~Ce~~i~ 50 (63)
T 1hae_A 9 KEKTFCVN-GGECFMVKDLSN-PSRYLCKCQPGFTGA-RCTENVP 50 (63)
T ss_dssp HHHTTSCT-TCEEEEEESSSS-SCCEEEECCTTEEST-TSCEECC
T ss_pred CCCCcCCC-CcEEecCCccCC-CCCEEEECCCCCcCC-ccCcCcC
Confidence 34678873 344443221121 457999999999774 8865554
No 443
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=59.09 E-value=4.3 Score=33.10 Aligned_cols=33 Identities=18% Similarity=0.672 Sum_probs=23.2
Q ss_pred ccCCCC-cceeeeccCCCceEEeCCCCceecCCCCCcC
Q psy5806 394 SHCAPK-VCSHICLPNKHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 394 n~C~~g-~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
++|.|| .|...=+...++|+|.|+.||. |..|+
T Consensus 14 ~pC~NGGtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce 47 (58)
T 3ltf_D 14 WYCLNDAHCFAVKIADLPVYSCECAIGFM----GQRCE 47 (58)
T ss_dssp HTSCSSCEEEEEEETTEEEEEEEECTTEE----SSSSC
T ss_pred CcCCCCCEEeCCccCCCCCEEeECCCCCc----cCCCc
Confidence 389965 5753222344589999999997 67885
No 444
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=56.64 E-value=2.4e+02 Score=31.27 Aligned_cols=187 Identities=12% Similarity=-0.001 Sum_probs=104.7
Q ss_pred EEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCc--eEEE
Q psy5806 1048 IFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQ--HKKI 1125 (1332)
Q Consensus 1048 ~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~--~~~~ 1125 (1332)
..+++.+..+.+.++....+.|...++..+.....+. ......+++++ ...++++. .+.|.++++... ....
T Consensus 62 ~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~--~~~~v~~v~~~--~~~~~~~~--~~~i~i~d~~~~~~~~~~ 135 (355)
T 3vu4_A 62 SKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK--VDAPVKDLFLS--REFIVVSY--GDVISVFKFGNPWKRITD 135 (355)
T ss_dssp CEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE--CSSCEEEEEEC--SSEEEEEE--TTEEEEEESSTTCCBSSC
T ss_pred EEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE--CCCceEEEEEc--CCEEEEEE--cCEEEEEECCCCceeeEE
Confidence 4456667777777776666788888876443333222 22345556655 56666654 357888888754 1111
Q ss_pred EecCCCCceE-EEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCc----------------eEEEEecCCCCcceEEEe
Q psy5806 1126 LVNDLMEPLA-IAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSY----------------RTVLVEEDLAFPNELAID 1188 (1332)
Q Consensus 1126 ~~~~~~~P~~-iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~----------------~~~l~~~~l~~p~glaiD 1188 (1332)
+.. |.+ +++.+ ..|.++.... .+.|...++.... ....+...-.....|+++
T Consensus 136 ~~~----~~~~~~~s~--~~la~~sg~~-----~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s 204 (355)
T 3vu4_A 136 DIR----FGGVCEFSN--GLLVYSNEFN-----LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLN 204 (355)
T ss_dssp CEE----EEEEEEEET--TEEEEEESSC-----TTCEEEEECCC------------------CCEEECCCSSCEEEEEEC
T ss_pred ecc----CCceEEEEc--cEEEEeCCCc-----CcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEEC
Confidence 211 444 44555 4555542111 2456666665433 012233233556789999
Q ss_pred cCCCEEEEEEcCCCe-EEEEecC-CCceEEEE---eecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1189 FKQRRLFWADSTNKR-IEYCDFF-GRSRKIVI---SKVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1189 ~~~~~LY~~d~~~~~-I~~~d~d-G~~~~~~~---~~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
++++.|.-+ ...+. |...|+. |.....+. ......+|++ .+ ++.+..+-...+.|...+...+
T Consensus 205 ~~g~~l~s~-s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~-----s~-~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 205 RKSDMVATC-SQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKW-----ST-DGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp TTSSEEEEE-ETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEE-----CT-TSCEEEEEETTCEEEEEESSCC
T ss_pred CCCCEEEEE-eCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEE-----CC-CCCEEEEEECCCEEEEEEccCC
Confidence 877666544 56676 8888886 43333333 1334567777 22 3444445556788988887655
No 445
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=56.48 E-value=6 Score=39.52 Aligned_cols=31 Identities=26% Similarity=0.658 Sum_probs=23.5
Q ss_pred ccCCCCcceeeeccCCCceEEeCCCCceecCCCCCcCC
Q psy5806 394 SHCAPKVCSHICLPNKHRFTCQCPLGLTLSPDNKSCSE 431 (1332)
Q Consensus 394 n~C~~g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~~ 431 (1332)
++|+++ ..|++..++|+|.|+.||. |..|+.
T Consensus 125 ~~C~~~---g~C~~~~~~~~c~C~~g~~----G~~Ce~ 155 (162)
T 1g1s_A 125 MSCSKQ---GECLETIGNYTCSCYPGFY----GPECEY 155 (162)
T ss_dssp TGGGGS---EEEEECSSSEEEEECTTEE----STTSCE
T ss_pred CCCCCC---CEEecCCCCceEeCCCCCc----Cccccc
Confidence 455532 2688888999999999998 567864
No 446
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=55.04 E-value=2.2e+02 Score=30.30 Aligned_cols=157 Identities=6% Similarity=-0.111 Sum_probs=95.9
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCcee---EeecCCCCceeeEEEecCCeEEE--EcCCCceEEEEeeCC
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKP---IPLMNDTIRDNFVIDWVANNIYY--IDSQMHTINVARSDG 1120 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~---i~~~~~~~p~glAvDw~~~~LY~--td~~~~~I~v~~ldG 1120 (1332)
....+.+.+.++.|+... ..+.|+..++..+..... ......+....++..+...++.+ +....+.|.+.+...
T Consensus 152 ~~~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~ 230 (318)
T 4ggc_A 152 EVCGLRWAPDGRHLASGG-NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS 230 (318)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTT
T ss_pred ceEEEEEcCCCCEEEEEe-cCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccc
Confidence 356777787777665544 678888888775443221 11122334567777766666654 344566888888875
Q ss_pred ceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCCcceEEEecCCCEEEEEEcC
Q psy5806 1121 QHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWADST 1200 (1332)
Q Consensus 1121 ~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~d~~ 1200 (1332)
...............++..|..+.++.+.... .+.|..-++........+...-.....|++.++++.|.-+ +.
T Consensus 231 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~-----d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~-s~ 304 (318)
T 4ggc_A 231 GACLSAVDAHSQVCSILWSPHYKELISGHGFA-----QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASA-AA 304 (318)
T ss_dssp CCEEEEEECSSCEEEEEEETTTTEEEEEECTT-----TCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEE-ET
T ss_pred ccccccccceeeeeeeeecccccceEEEEEcC-----CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEE-ec
Confidence 55444333445678899999888887664322 3567777776555444444333556788888877665533 45
Q ss_pred CCeEEEEec
Q psy5806 1201 NKRIEYCDF 1209 (1332)
Q Consensus 1201 ~~~I~~~d~ 1209 (1332)
.+.|..-|+
T Consensus 305 D~~v~iWd~ 313 (318)
T 4ggc_A 305 DETLRLWRC 313 (318)
T ss_dssp TTEEEEECC
T ss_pred CCeEEEEEC
Confidence 566655554
No 447
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=52.53 E-value=9 Score=30.12 Aligned_cols=32 Identities=19% Similarity=0.599 Sum_probs=23.4
Q ss_pred cccCCCCcceeeeccCCCceEEeCCCCceecCCCCCcC
Q psy5806 393 QSHCAPKVCSHICLPNKHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 393 ~n~C~~g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
.+.|.||.|..+ ...+.++|.|+.||. |.+|.
T Consensus 13 ~~yC~nG~C~~~--~~~~~~~C~C~~gy~----G~RCe 44 (50)
T 3e50_C 13 TQFCFHGTCRFL--VQEDKPACVCHSGYV----GARCE 44 (50)
T ss_pred cCcccCCEEeec--cCCCCeEEECCCCCc----ccCCC
Confidence 577888866543 234588999999997 66784
No 448
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=52.42 E-value=7.8 Score=37.75 Aligned_cols=35 Identities=26% Similarity=0.797 Sum_probs=24.7
Q ss_pred ccccCCCCccee--eec-------cCCCceEEeCCCCceecCCCCCcC
Q psy5806 392 YQSHCAPKVCSH--ICL-------PNKHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 392 ~~n~C~~g~Csh--lCl-------~~~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
..++|....|.+ .|+ +..++|+|.|+.||. |..|.
T Consensus 51 ~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~----G~~C~ 94 (143)
T 4d90_A 51 SAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFN----GIHCQ 94 (143)
T ss_dssp CCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEE----STTSC
T ss_pred cCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCc----CCCcc
Confidence 345666555543 677 556799999999996 66775
No 449
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=51.76 E-value=6.7 Score=37.97 Aligned_cols=31 Identities=26% Similarity=0.745 Sum_probs=25.2
Q ss_pred CCcccCCCCCCcc--ccccCCCCccccCCCCee
Q psy5806 969 PNACGSNNGGCSH--LCLRNPTNFTCACPTGIL 999 (1332)
Q Consensus 969 ~n~C~~~nGgCsh--lCl~~p~~~~C~Cp~g~~ 999 (1332)
.++|+..+..|.+ .|..++++|+|.|+.||.
T Consensus 5 ideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~ 37 (135)
T 2vj3_A 5 VDECSLGANPCEHAGKCINTLGSFECQCLQGYT 37 (135)
T ss_dssp CCTTTSSSCSSSTTCEEEECSSSEEEECCTTEE
T ss_pred cccccCCCCCCCCCCEeECCCCCEEEECCCCCc
Confidence 4677655556765 799999999999999997
No 450
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=51.62 E-value=6 Score=48.12 Aligned_cols=32 Identities=25% Similarity=0.733 Sum_probs=23.5
Q ss_pred cccCCCCcceeeecc-CCCceEEeCC-CCceecCCCCCcCC
Q psy5806 393 QSHCAPKVCSHICLP-NKHRFTCQCP-LGLTLSPDNKSCSE 431 (1332)
Q Consensus 393 ~n~C~~g~CshlCl~-~~~~~~C~C~-~G~~L~~d~~tC~~ 431 (1332)
.|||+||+ .|.. ..++|+|.|+ .||+ |+.|+.
T Consensus 7 ~~PC~ngG---~C~~~~~~~y~C~C~~~G~~----G~~Ce~ 40 (553)
T 1q4g_A 7 YYPCQHQG---ICVRFGLDRYQCDCTRTGYS----GPNCTI 40 (553)
T ss_dssp GCCCCTTC---EEEEETTTEEEEECTTSSEE----TTTTCE
T ss_pred CCCCCCCC---CcCCCCCCceEeeCCCCCcC----CCCCCC
Confidence 46666532 4555 6779999999 9998 778964
No 451
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=49.30 E-value=2.4e+02 Score=34.95 Aligned_cols=93 Identities=8% Similarity=-0.032 Sum_probs=48.5
Q ss_pred eeeEEEecC-CeEEEEcCC-----CceEEEEeeCCceEEEEecCCCCc-eEEEEcCCCc-EEEEEecCCCCCCCCCcEEE
Q psy5806 1092 DNFVIDWVA-NNIYYIDSQ-----MHTINVARSDGQHKKILVNDLMEP-LAIAVYPRRG-LLFYSHWGLYDNSPTTKIEK 1163 (1332)
Q Consensus 1092 ~glAvDw~~-~~LY~td~~-----~~~I~v~~ldG~~~~~~~~~~~~P-~~iavdp~~g-~Lywtd~~~~~~~~~~~I~r 1163 (1332)
.+||+|+.. ++||++-.. .+.|.+..=.|+.=+.+... ..| ..|+++|.+. .||+.... ..|+|
T Consensus 93 ~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~~p-~~~~~~l~~~P~~~~~l~a~~~~-------~gly~ 164 (685)
T 3f6k_A 93 FGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTDLP-FHPLTQMMYSPQNSDYLLALSTE-------NGLWV 164 (685)
T ss_dssp GCEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEECS-SCBSSCCEEETTEEEEEEEEBTT-------CCEEE
T ss_pred eEEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEeccCC-CCCceEEEEecCCCCEEEEEECC-------CCEEE
Confidence 579999864 478888642 34554333335432322222 233 3699999654 56666421 35888
Q ss_pred EecCCCceEEEEecCCCCcceEEEecCCCEEEEE
Q psy5806 1164 VYLDGSYRTVLVEEDLAFPNELAIDFKQRRLFWA 1197 (1332)
Q Consensus 1164 ~~ldG~~~~~l~~~~l~~p~glaiD~~~~~LY~~ 1197 (1332)
..=.|..-+ .+...+. ...++ ..+.||+.
T Consensus 165 S~DgG~TW~-~i~~~v~---~~~f~-~~~~Iy~~ 193 (685)
T 3f6k_A 165 SKNFGGKWE-EIHKAVC---LAKWG-SDNTIFFT 193 (685)
T ss_dssp ESSTTSSEE-EEESSEE---EEEEC-STTCEEEE
T ss_pred EeCCCCCcE-EeecCcc---ccccC-CCCeEEEE
Confidence 655454443 3333332 12233 23556665
No 452
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=48.15 E-value=5.6 Score=31.72 Aligned_cols=37 Identities=22% Similarity=0.474 Sum_probs=24.2
Q ss_pred CCCCCCCCCCCCCCcccee-ccCCCCceeeCCCCCCCCccccccc
Q psy5806 1286 LTWNPCAQDNGGCSHLCFY-KGRTKGYVCGCPDDLEPNEECFEGI 1329 (1332)
Q Consensus 1286 ~~~n~C~~~ng~C~~lC~~-~~~~~~~~C~C~~~~~~~~~c~~~~ 1329 (1332)
...|||.. .|. |.. .+ .++++|.|+.||.+. .|...+
T Consensus 9 ~~~~pC~n-GG~----C~~~~~-~~~~~C~C~~GytG~-~Ce~~~ 46 (53)
T 1nql_B 9 SHDGYCLH-DGV----CMYIEA-LDKYACNCVVGYIGE-RCQYRD 46 (53)
T ss_dssp TTCCEECT-TCE----EEEETT-TTEEEEEECTTEEST-TSCEEC
T ss_pred CCCCCCCC-CeE----EeeecC-CCCEEEecCCCCcCC-CCCcCC
Confidence 34678873 234 542 21 456999999999875 886544
No 453
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=48.14 E-value=7.8 Score=35.30 Aligned_cols=30 Identities=30% Similarity=0.774 Sum_probs=25.3
Q ss_pred CC-CCCCCCCCC--ccceeccCCCCceeeCCCCC
Q psy5806 1289 NP-CAQDNGGCS--HLCFYKGRTKGYVCGCPDDL 1319 (1332)
Q Consensus 1289 n~-C~~~ng~C~--~lC~~~~~~~~~~C~C~~~~ 1319 (1332)
|| |..+||||. --|...+ +...+|.|..++
T Consensus 51 Np~C~~nNGGCd~nAeC~~~~-~~ki~C~C~~~~ 83 (105)
T 1n1i_A 51 SITCEENNGGCAPEAECTMDD-KKEVECKCTKEG 83 (105)
T ss_dssp CCCTTSGGGGSCTTSEEEECT-TSCEEEECCSTT
T ss_pred CcchhhcCCCcCCCcEeEECC-CCEEEeECCCCC
Confidence 89 999999999 5688873 467899999886
No 454
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=47.65 E-value=6.8 Score=33.94 Aligned_cols=32 Identities=19% Similarity=0.559 Sum_probs=21.7
Q ss_pred cccCCCCcceeeeccCCCceEEeCCCCceecCCCCCcC
Q psy5806 393 QSHCAPKVCSHICLPNKHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 393 ~n~C~~g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
.+.|.||.|-.+ ...+.+.|.|+.||. |..|.
T Consensus 45 ~~yClnG~C~~i--~~~~~~~C~C~~GYt----G~RCE 76 (79)
T 1xdt_R 45 KDFCIHGECKYV--KELRAPSCICHPGYH----GERCH 76 (79)
T ss_dssp TTCCSSEEECCB--GGGTBCCEEECTTEE----STTCC
T ss_pred cCcCCCCEeeee--cCCCCeEEEcCCCcc----ccccc
Confidence 577777755332 233578999999998 55673
No 455
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=46.42 E-value=10 Score=29.21 Aligned_cols=33 Identities=21% Similarity=0.451 Sum_probs=22.1
Q ss_pred CCCCCCCCCCCCccceeccCCCCceeeCCCCCCCCccccc
Q psy5806 1288 WNPCAQDNGGCSHLCFYKGRTKGYVCGCPDDLEPNEECFE 1327 (1332)
Q Consensus 1288 ~n~C~~~ng~C~~lC~~~~~~~~~~C~C~~~~~~~~~c~~ 1327 (1332)
.|||.+ |.| ......+++.|.|+.||.+. .|..
T Consensus 11 ~~pC~n--G~C----~~~~~~~~~~C~C~~GytG~-~Ce~ 43 (46)
T 1k36_A 11 NGYCLH--GQC----IYLVDMSQNYCRCEVGYTGV-RCEH 43 (46)
T ss_dssp CSSCSS--EEE----EEETTTTEEEEEECTTCSST-TSCC
T ss_pred CCCCCC--CEe----eccCCCCCEEEECCCCCccC-CCCc
Confidence 388874 544 43311356899999999875 8853
No 456
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=44.71 E-value=8.1 Score=47.09 Aligned_cols=32 Identities=19% Similarity=0.737 Sum_probs=22.5
Q ss_pred cccCCCCcceeeecc-CCCceEEeCC-CCceecCCCCCcCC
Q psy5806 393 QSHCAPKVCSHICLP-NKHRFTCQCP-LGLTLSPDNKSCSE 431 (1332)
Q Consensus 393 ~n~C~~g~CshlCl~-~~~~~~C~C~-~G~~L~~d~~tC~~ 431 (1332)
.|||+||+ .|.. ..++|+|.|+ .||. |+.|+.
T Consensus 6 s~PC~ngG---~C~~~~~~~y~C~C~~~G~~----G~~Ce~ 39 (587)
T 3nt1_A 6 SNPCQNRG---ECMSTGFDQYKCDCTRTGFY----GENCTT 39 (587)
T ss_dssp TCCCCTTC---EEEEEETTEEEEECTTSSEE----TTTTCE
T ss_pred CCCCCCCC---EeeCCCCCCeEEecCCCCcc----CCCCCC
Confidence 45666432 4553 3469999999 9997 788964
No 457
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=43.29 E-value=17 Score=32.43 Aligned_cols=38 Identities=24% Similarity=0.562 Sum_probs=25.3
Q ss_pred CCCCCCCCCCCCCccceeccCCCCceeeCCCCCCCCcccccccc
Q psy5806 1287 TWNPCAQDNGGCSHLCFYKGRTKGYVCGCPDDLEPNEECFEGIQ 1330 (1332)
Q Consensus 1287 ~~n~C~~~ng~C~~lC~~~~~~~~~~C~C~~~~~~~~~c~~~~~ 1330 (1332)
..|||.. || .|+.....++++|.|+.||.+. .|...|.
T Consensus 52 ~~~pC~n--gg---~C~~~~~~~~~~C~C~~G~~G~-~Ce~~id 89 (91)
T 1tpg_A 52 SEPRCFN--GG---TCQQALYFSDFVCQCPEGFAGK-SCEIDTR 89 (91)
T ss_dssp SSCCSCT--TC---EEEEESSSSCEEEECCTTCBSS-SCCBCSS
T ss_pred cCCCCCC--CC---EeecCCCCCCeEeECCCCCcCC-cCCcCCC
Confidence 4466763 22 5776521267999999999874 8976654
No 458
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=42.49 E-value=21 Score=28.09 Aligned_cols=32 Identities=25% Similarity=0.599 Sum_probs=22.0
Q ss_pred cccCCCCcceeeeccCCCceEEeCCCCceecCCCCCcC
Q psy5806 393 QSHCAPKVCSHICLPNKHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 393 ~n~C~~g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
.+.|.+|.|-.+ ...+.+.|.|+.||. |.+|.
T Consensus 17 ~~yC~nG~C~~i--~~~~~~~C~C~~gy~----G~RCe 48 (50)
T 2rnl_A 17 QNFCIHGECKYI--EHLEAVTCKCQQEYF----GERCG 48 (50)
T ss_dssp GGTCSSSEEEEE--TTTTEEEEECCSSCC----SSSCC
T ss_pred hCcCCCCEEEEe--cCCCCeeEECCCCcc----ccccc
Confidence 466777755432 344588999999997 55674
No 459
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=41.85 E-value=5.4e+02 Score=31.03 Aligned_cols=64 Identities=13% Similarity=0.175 Sum_probs=38.1
Q ss_pred CcEEEEEeCCCCeEEEEECCCCCCceeEeecCCC--------CceeeEEEecCCeEEEEcCCCceEEEEeeC-CceE
Q psy5806 1056 KNLIYFADMRSGNLRTFDMSDSTRIKPIPLMNDT--------IRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHK 1123 (1332)
Q Consensus 1056 ~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~~~--------~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~ 1123 (1332)
+++||+.....+ |+.+++.+|............ ...+++++ ++.||+... .+.|..++.. |+.+
T Consensus 68 ~g~vyv~~~~~~-v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~--~~~v~~~t~-dg~l~AlD~~TG~~~ 140 (582)
T 1flg_A 68 DGVIYVTASYSR-LFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY--GDKVFFGTL-DASVVALNKNTGKVV 140 (582)
T ss_dssp TTEEEEEETTTE-EEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE--TTEEEEEET-TTEEEEEESSSCCEE
T ss_pred CCEEEEEcCCCC-EEEEECCCCcEEEEEcCCCCcccccccccCCCccEEE--CCEEEEEeC-CCEEEEEECCCCCEE
Confidence 467888764333 777887655544333211100 12567886 889998754 3577778774 6644
No 460
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=35.57 E-value=4.7e+02 Score=28.56 Aligned_cols=186 Identities=10% Similarity=-0.068 Sum_probs=92.9
Q ss_pred eEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecC-CCCceeeEEEecCCeEEEEcCCCceEEEEeeC-CceEE
Q psy5806 1047 SIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMN-DTIRDNFVIDWVANNIYYIDSQMHTINVARSD-GQHKK 1124 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~-~~~p~glAvDw~~~~LY~td~~~~~I~v~~ld-G~~~~ 1124 (1332)
+.+|.+.. ++++|.+. ..+.|++.. + +...-..+..+ .....+++++.. +.+|.... .+.|.+..-. |..=+
T Consensus 124 ~~~i~~~~-~~~~~~~~-~~g~v~~S~-D-gG~tW~~~~~~~~~~~~~~~~~~~-~~~~~~g~-~G~~~~S~d~gG~tW~ 197 (327)
T 2xbg_A 124 PRLIKALG-NGSAEMIT-NVGAIYRTK-D-SGKNWQALVQEAIGVMRNLNRSPS-GEYVAVSS-RGSFYSTWEPGQTAWE 197 (327)
T ss_dssp EEEEEEEE-TTEEEEEE-TTCCEEEES-S-TTSSEEEEECSCCCCEEEEEECTT-SCEEEEET-TSSEEEEECTTCSSCE
T ss_pred eEEEEEEC-CCCEEEEe-CCccEEEEc-C-CCCCCEEeecCCCcceEEEEEcCC-CcEEEEEC-CCcEEEEeCCCCCcee
Confidence 45666543 35677765 356677653 4 33333333222 234567888753 44554443 3345444322 44322
Q ss_pred EEe-cCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecC-CCC---cceEEEecCCCEEEEEEc
Q psy5806 1125 ILV-NDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEED-LAF---PNELAIDFKQRRLFWADS 1199 (1332)
Q Consensus 1125 ~~~-~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~-l~~---p~glaiD~~~~~LY~~d~ 1199 (1332)
.+. .......+|++++ .+.+|.+..+ +.|++...|+...-..+... +.. ...|+.+. .+.||.+-
T Consensus 198 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~-------G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~-~~~~~~~g- 267 (327)
T 2xbg_A 198 PHNRTTSRRLHNMGFTP-DGRLWMIVNG-------GKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT-PNEVWLAG- 267 (327)
T ss_dssp EEECCSSSCEEEEEECT-TSCEEEEETT-------TEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS-SSCEEEEE-
T ss_pred ECCCCCCCccceeEECC-CCCEEEEeCC-------ceEEEecCCCCCeeEeccCCcccCCcceEEEEecC-CCEEEEEe-
Confidence 221 1224567888888 5677765433 34766655632221111111 111 23445553 46677764
Q ss_pred CCCeEEEEecCCCceEEEEe----ecccceEEEecCCccccccEEEEEECCCCEEEEEEe
Q psy5806 1200 TNKRIEYCDFFGRSRKIVIS----KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIARE 1255 (1332)
Q Consensus 1200 ~~~~I~~~d~dG~~~~~~~~----~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~ 1255 (1332)
..+.|.+..-.|...+.+.. ....+.|++ .++..+|+--..+.|++.+.
T Consensus 268 ~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~-------~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 268 GAGALLCSQDGGQTWQQDVDVKKVPSNFYKILF-------FSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp STTCEEEESSTTSSCEECGGGTTSSSCCCEEEE-------EETTEEEEECSTTEEEEECC
T ss_pred CCCeEEEeCCCCcccEEcCccCCCCCCeEEEEE-------ECCCceEEEcCCceEEEEcC
Confidence 35667654333555554432 123456766 33333555556778877663
No 461
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=35.37 E-value=22 Score=33.68 Aligned_cols=29 Identities=28% Similarity=0.753 Sum_probs=19.7
Q ss_pred cCCCCcceeeeccCC--Cce-EEeCCCCceecCCCCCcC
Q psy5806 395 HCAPKVCSHICLPNK--HRF-TCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 395 ~C~~g~CshlCl~~~--~~~-~C~C~~G~~L~~d~~tC~ 430 (1332)
||+||+ .|+... .+| +|.||.||+ |+.|+
T Consensus 2 pC~ngg---tC~~~~~~~~~~~C~Cp~g~~----G~~Ce 33 (122)
T 2fd6_A 2 DCLNGG---TCVSNKYFSNIHWCNCPKKFG----GQHCE 33 (122)
T ss_dssp CCCSSC---EEEECTTTTTCEEEECCTTEE----STTSC
T ss_pred CCCCcC---CcCCCcccCCCCCccCCCCCC----Ccccc
Confidence 688665 345553 455 999999997 55664
No 462
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=34.30 E-value=5.2e+02 Score=32.18 Aligned_cols=122 Identities=15% Similarity=0.123 Sum_probs=69.7
Q ss_pred ceEEEEEEccC-CeEEEEcCCCceEEEEEecCcceEEEEeC-C-----CCCCccEEEecc-CCeEEEEeCC--------C
Q psy5806 468 SVVAIAWESAN-DSLYWADVENGEINRAHINGTFQYNVIRH-N-----TKKPAGVAIDWR-TNKLYWTESE--------Y 531 (1332)
Q Consensus 468 ~~~~i~~d~~~-~~lywsD~~~~~I~r~~~~g~~~~~v~~~-~-----~~~p~glAvDw~-~~~lYw~d~~--------~ 531 (1332)
.+.+|++++.+ +.||. -...+.|+|..=.|..-+.+... . ......||+|+. .+.||..-.. .
T Consensus 24 ~i~~i~~~p~~~~~~~~-~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYA-RAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEE-ECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEE-EecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 57789999876 45555 34557899876666655544321 1 123568999984 4678877432 2
Q ss_pred CeEEEEeCCCC-CcEEEEeCCC--CC-----ceEEEEecCC-CeEEEEecCCCCceEEEcCCCCceEEE
Q psy5806 532 NWIEVSNLDGT-YPTLLFWQNL--SE-----PRDIAVNPIG-GIMYWCSWGDLHKIEMAGMDGSHRHIL 591 (1332)
Q Consensus 532 ~~I~v~~l~g~-~~~~l~~~~~--~~-----P~~iavdp~~-G~lywtd~g~~~~I~r~~~dG~~~~~l 591 (1332)
..|.+..=.|+ ..++.....+ .. ...|++||.+ +.||.... ....|.|..=.|..-+.+
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~-~g~gl~~S~DgG~tW~~~ 170 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR-CGNGLWRSTDYGVTWSKV 170 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS-TTCCEEEESSTTSSCEEC
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec-cCCcEEEeCCCCcceecc
Confidence 45655543444 3333221111 11 2579999986 55666542 114677766666655543
No 463
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=32.56 E-value=19 Score=41.20 Aligned_cols=35 Identities=29% Similarity=0.726 Sum_probs=31.6
Q ss_pred CCcceeeeccCCCceEEeCCCCceecCCCCCcCCC
Q psy5806 398 PKVCSHICLPNKHRFTCQCPLGLTLSPDNKSCSES 432 (1332)
Q Consensus 398 ~g~CshlCl~~~~~~~C~C~~G~~L~~d~~tC~~~ 432 (1332)
..+|+|.|.+..++|.|.|..||.|..+.++|...
T Consensus 131 ~~~~~~~c~n~~g~~~csC~~g~~l~~~~~~~~~~ 165 (361)
T 4aqb_A 131 ELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRVE 165 (361)
T ss_dssp SSCCSSEEEEETTEEEEECCTTCEECTTSSCEECC
T ss_pred CCCCCccCCccCCCceeccCCCeEEeccccccccc
Confidence 56899999999999999999999999998888654
No 464
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=32.31 E-value=1.4e+02 Score=34.55 Aligned_cols=32 Identities=22% Similarity=0.831 Sum_probs=23.5
Q ss_pred ccCCCCcceeeeccCCCceEEeCCC-CceecCCCCCcCCC
Q psy5806 394 SHCAPKVCSHICLPNKHRFTCQCPL-GLTLSPDNKSCSES 432 (1332)
Q Consensus 394 n~C~~g~CshlCl~~~~~~~C~C~~-G~~L~~d~~tC~~~ 432 (1332)
+||.|+ -.|+...++|+|.|+. ||. |..|...
T Consensus 191 ~pC~n~---g~C~~~~~~~~C~C~~~~~~----G~~C~~~ 223 (410)
T 3asi_A 191 DSCSNQ---GVCLQQWDGFSCDCSMTSFS----GPLCNDP 223 (410)
T ss_dssp TSSSTT---CEEEECSSSEEEECTTTSEE----STTSCEE
T ss_pred ccCCCC---CEecCCCCCceEeccCCccc----CCCCCCC
Confidence 555543 2677788899999996 986 6789753
No 465
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=31.78 E-value=17 Score=32.85 Aligned_cols=30 Identities=30% Similarity=0.770 Sum_probs=25.0
Q ss_pred CCCCCCCCCCC--ccceeccCC----CCceeeCCCCC
Q psy5806 1289 NPCAQDNGGCS--HLCFYKGRT----KGYVCGCPDDL 1319 (1332)
Q Consensus 1289 n~C~~~ng~C~--~lC~~~~~~----~~~~C~C~~~~ 1319 (1332)
++|..+||||. -.|.... + ...+|.|..++
T Consensus 47 ~sC~~nNGGCd~nA~C~~~~-~~~~~~ki~C~C~~g~ 82 (99)
T 1ob1_C 47 PTCNENNGGCDADAKCTEED-SGSNGKKITCECTKPD 82 (99)
T ss_dssp CCSTTGGGGCCTTEEEECCS-CSSSSCCCEEEECSTT
T ss_pred CChhhcCCCcCCCceeEecC-CcccCCceEeEeCCCC
Confidence 79999999999 4698873 3 46889999987
No 466
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=30.21 E-value=21 Score=32.50 Aligned_cols=40 Identities=33% Similarity=0.680 Sum_probs=28.5
Q ss_pred CC-CcCCCCCCcc--ccccCCCCCceeeCCCCccc-cCCCCccc
Q psy5806 664 HP-CNENNGGCSH--LCLIAPKDGIRCVCPAGNLL-REDRRTCS 703 (1332)
Q Consensus 664 ~p-C~~~nggCs~--lCl~~~~~~~~C~Cp~g~~l-~~d~~tC~ 703 (1332)
|| |..+||||.. -|........+|.|..+|.- .-+|.-|.
T Consensus 51 Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~~~~GvfC~ 94 (105)
T 1n1i_A 51 SITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEPLFEGVFCS 94 (105)
T ss_dssp CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCEEGGGTEEC
T ss_pred CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCccccceEEEC
Confidence 88 9999999985 78777434889999888521 12455554
No 467
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=29.47 E-value=22 Score=31.56 Aligned_cols=31 Identities=29% Similarity=0.698 Sum_probs=24.5
Q ss_pred CCCCCCCCCCCC--ccceeccCCCCceeeCCCCC
Q psy5806 1288 WNPCAQDNGGCS--HLCFYKGRTKGYVCGCPDDL 1319 (1332)
Q Consensus 1288 ~n~C~~~ng~C~--~lC~~~~~~~~~~C~C~~~~ 1319 (1332)
..+|..+||||+ --|... ....-+|.|...+
T Consensus 46 ~~~C~~NNGGCd~nA~C~~~-~~~kIvC~C~~~~ 78 (95)
T 1b9w_A 46 NMTCKDKNGGCAPEAECKMN-DKNEIVCKCTKEG 78 (95)
T ss_dssp TCCTTTGGGGSCTTSEEEEC-TTSCEEEECCSTT
T ss_pred CCCccccCCCcCCCcceeec-CCCcEEEECCCCC
Confidence 357999999999 578877 2256789999876
No 468
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=27.86 E-value=8.7e+02 Score=29.28 Aligned_cols=118 Identities=19% Similarity=0.380 Sum_probs=71.6
Q ss_pred EEEEEecCcceEEEEeCCCCCCccE-EEeccCCeE--EEE-eC-----------CCCeEEEEeCCCCCcEEEEeCCCCCc
Q psy5806 491 INRAHINGTFQYNVIRHNTKKPAGV-AIDWRTNKL--YWT-ES-----------EYNWIEVSNLDGTYPTLLFWQNLSEP 555 (1332)
Q Consensus 491 I~r~~~~g~~~~~v~~~~~~~p~gl-AvDw~~~~l--Yw~-d~-----------~~~~I~v~~l~g~~~~~l~~~~~~~P 555 (1332)
+-.+.|+|...+.++..+.....-| |+||.+++| .|. +. ....+.++++||--+..|+...
T Consensus 274 ~~vayLDG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W~~ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv~Gs---- 349 (620)
T 2zuy_A 274 AGTAYLDGERPSLVMARGYYTRTVLVAYDFRNGRLKKRWVFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIYGA---- 349 (620)
T ss_dssp EEEECTTCC-CEEEEEECSSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGTTCCCSSCEEECCSSSSSCEEEETT----
T ss_pred eeEEecCCCCceEEEecCcccceeEEEEEccCCceeeeeEecCCCCcccccccccCcCceEEecCCCCceeEEEee----
Confidence 3446678877777776665544333 789988854 455 22 1257999999987666665332
Q ss_pred eEEEEecCCCeEEEEe-cCCCCceEEEcCCCCc--eEEEE-eCCCCCceeeE-EeccCCeEEEEe
Q psy5806 556 RDIAVNPIGGIMYWCS-WGDLHKIEMAGMDGSH--RHILA-SDSLKNPTGLA-IDLENSRLYWAN 615 (1332)
Q Consensus 556 ~~iavdp~~G~lywtd-~g~~~~I~r~~~dG~~--~~~l~-~~~l~~p~gla-iD~~~~rLYw~d 615 (1332)
.++|. +|.+.|+- .+....+..+.+|... .+++. .++-..|.|.+ .|..++.++|.-
T Consensus 350 --~~iD~-dG~~L~st~~gHGDa~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~DA~tG~vlw~~ 411 (620)
T 2zuy_A 350 --MAVDH-DGTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAGTGEILWGV 411 (620)
T ss_dssp --EEECT-TSSEEEECSCCCCSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEE
T ss_pred --eEECC-CCCEEeecCCCCCceeEEEecCCCCCCCEEEEEecCCCCCCceEEEECCCCcEEEEe
Confidence 47775 57777764 4445567788888763 33332 33323455664 477677777764
No 469
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=27.24 E-value=8.6e+02 Score=30.30 Aligned_cols=188 Identities=14% Similarity=0.003 Sum_probs=98.1
Q ss_pred eEEEEEeCCCcEEEEEeCC--CCeEEEEECCCCCCceeEeecCCCC-ceeeEEEecCCe-EEEEcCCCceEEEEeeC-Cc
Q psy5806 1047 SIFFDYHYSKNLIYFADMR--SGNLRTFDMSDSTRIKPIPLMNDTI-RDNFVIDWVANN-IYYIDSQMHTINVARSD-GQ 1121 (1332)
Q Consensus 1047 ~~~id~d~~~~~lY~sd~~--~~~I~~~~l~~g~~~~~i~~~~~~~-p~glAvDw~~~~-LY~td~~~~~I~v~~ld-G~ 1121 (1332)
...+++++.+..+.|+-.. .+.|++.. + +...-..+ .++.. -..|++|....+ ||+.+ .+.|.+ ..| |+
T Consensus 546 ~~~i~v~~~~~~~~~~~~~~~~~~v~~S~-D-~G~tW~~~-~~l~~~~~~i~~d~~~~~~~y~g~--~g~v~~-S~DgG~ 619 (763)
T 3a0f_A 546 GGTIAVGADGKTFVWSPSKADGKGPYTSS-D-YGKTWTAP-SGLSKQTTGIAADRVQANTFYVYV--EGDFFV-STDGGK 619 (763)
T ss_dssp CCEEEECTTSSCEEEECSSCCSSCCEEES-S-TTSCCBCC-BSCCCCCSCEEECSSSTTCEEEEE--TTEEEE-ESSTTS
T ss_pred cceEEEecCCCcEEEEecccCCCceEEeC-C-CCCCCeec-CCCCCCcceEEEeccCCCEEEEEc--CCCEEE-EeCCCc
Confidence 3455566655444444332 44666543 4 33333322 23322 246888876554 66663 355654 344 44
Q ss_pred eEEEEecCCC----CceEEEEcC-CCcEEEEEecCCCCCCCCCcEEEEecCCCceEEEEecCCCC-c----ceE--EEe-
Q psy5806 1122 HKKILVNDLM----EPLAIAVYP-RRGLLFYSHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDLAF-P----NEL--AID- 1188 (1332)
Q Consensus 1122 ~~~~~~~~~~----~P~~iavdp-~~g~Lywtd~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l~~-p----~gl--aiD- 1188 (1332)
.=+.+..++. .+.-|+++| ..+.||.+-.+ ..|++..=.|..-+.+. .+.. . .++ ++.
T Consensus 620 tW~~~~~~lp~~~~~~~~i~~~~~~~~~l~~~~~~-------~~l~~S~D~G~tW~~~~--~~~~~~~~~~~~~g~~~~~ 690 (763)
T 3a0f_A 620 SYTKKGNGLPCCWTYTGTPVTSNLRAGELWVSVKG-------VGIYHSTDFGNTFTALA--GSGSSLNPAVFSIGAPQTP 690 (763)
T ss_dssp BCEEECBTSCCSSCCCEEEEECSSSTTCEEEEETT-------TEEEEESSTTSBCEECT--TBTTTBEEEEEEEECCSST
T ss_pred CccccccCCCcccCccccEEECCCCCCcEEEEcCC-------CeEEEEcCCCCCceEcc--CCCcccccceeEEeeecCC
Confidence 3333333332 223388888 56788887643 35888766666554442 2211 1 122 222
Q ss_pred cCCCEEEEEE--c--CCCeEEEEecCCCceEEEEe----ecccceEEEecCCccc-cccEEEEEECCCCEEEEEEe
Q psy5806 1189 FKQRRLFWAD--S--TNKRIEYCDFFGRSRKIVIS----KVAPYGLSVRQSPGKA-FIVELYWTDWEAMSVVIARE 1255 (1332)
Q Consensus 1189 ~~~~~LY~~d--~--~~~~I~~~d~dG~~~~~~~~----~~~P~glav~~~~~~~-~~~~lYwtd~~~~~V~~~~~ 1255 (1332)
...+.||++- . ..+.|++.+=.|..-+.+-. ...+..|++ ++ ..++||++.... .|+..+.
T Consensus 691 ~~~~~l~~~G~~~~~~~~gl~~S~D~G~tW~~~~~~~~~~~~~~~i~~-----~p~~~~~v~~~T~Gr-Gi~~g~~ 760 (763)
T 3a0f_A 691 NATETLFLWGIPSASQPEGLYMSTDNGGLWTRLNDDAHNYGGATVISG-----DPRIYGRVYIGMNGR-GIICAQA 760 (763)
T ss_dssp TSSCEEEEEEECSTTSCSEEEEESSTTSCCEECSCTTCCTBCEEEEEE-----CTTSTTEEEEEEBSS-CEEEEES
T ss_pred CCCceEEEEEEcccCCCcEEEEeCCCCCCcEeccCccccCCCcceEEe-----CCCCCCEEEEeCCCC-eEEEEec
Confidence 2356788864 1 34668887666777666652 233335777 22 246799887544 4444443
No 470
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=27.08 E-value=1.3e+02 Score=40.50 Aligned_cols=37 Identities=16% Similarity=0.409 Sum_probs=4.0
Q ss_pred ccccCCCCccccCCC-CeeEccCCccccccCcceEEEEeecc
Q psy5806 982 LCLRNPTNFTCACPT-GILLSADRRSCFSRTREFLLYTSRFG 1022 (1332)
Q Consensus 982 lCl~~p~~~~C~Cp~-g~~l~~d~~tC~~~p~~~ll~~~~~~ 1022 (1332)
.|...+++++|.||. ||. +..|...+..+.+.....+
T Consensus 203 ~C~~~~~~~~C~C~~~g~~----G~~Ce~~~~~~~~~F~G~~ 240 (1245)
T 3qcw_A 203 VCSVVDDQAVCDCSRTGFR----GKDCSQGKEEYIATFKGSE 240 (1245)
T ss_dssp --------------------------------CCEEEECSSC
T ss_pred CCccCCCCceeECCCCCcc----CCccccCcccceeeeCCcE
Confidence 466777889999996 775 6788754344444334343
No 471
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=26.70 E-value=24 Score=35.97 Aligned_cols=34 Identities=26% Similarity=0.702 Sum_probs=23.0
Q ss_pred cCCCCcceeeeccCCC---ceEEeCCCCceecCCCCCcCCC
Q psy5806 395 HCAPKVCSHICLPNKH---RFTCQCPLGLTLSPDNKSCSES 432 (1332)
Q Consensus 395 ~C~~g~CshlCl~~~~---~~~C~C~~G~~L~~d~~tC~~~ 432 (1332)
.|....|.+-|.+... -.+|.||.||. |..|...
T Consensus 145 ~C~~~~C~~~C~ngG~Cv~P~~C~C~~Gw~----G~~C~~~ 181 (188)
T 2ygo_A 145 TCQQAECPGGCRNGGFCNERRICECPDGFH----GPHCEGT 181 (188)
T ss_dssp EECCCCCTTCCCTTCEECTTSCEECCTTCB----TTTTCBC
T ss_pred cccCCccCCCCCCCCEeCCCCcccCcCCCC----CCCCcCC
Confidence 4554556666665432 46899999997 7789654
No 472
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=25.50 E-value=9.4e+02 Score=28.85 Aligned_cols=117 Identities=18% Similarity=0.348 Sum_probs=72.5
Q ss_pred EEEecCcceEEEEeCCCCCC-ccEEEeccCCeE--EEE-eC-----------CCCeEEEEeCCCCCcEEEEeCCCCCceE
Q psy5806 493 RAHINGTFQYNVIRHNTKKP-AGVAIDWRTNKL--YWT-ES-----------EYNWIEVSNLDGTYPTLLFWQNLSEPRD 557 (1332)
Q Consensus 493 r~~~~g~~~~~v~~~~~~~p-~glAvDw~~~~l--Yw~-d~-----------~~~~I~v~~l~g~~~~~l~~~~~~~P~~ 557 (1332)
-+.|+|...+.++..+.... .=.|+||.+++| .|. +. ..+.+.|.++||--+..|+.. +
T Consensus 272 vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~G------s 345 (591)
T 2zux_A 272 IAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFG------S 345 (591)
T ss_dssp EECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEET------T
T ss_pred EEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEe------e
Confidence 35677776666665544332 345789988876 665 22 225899999998766666533 2
Q ss_pred EEEecCCCeEEEEe-cCCCCceEEEcCCCCce--EEEE-eCCCCCceeeE-EeccCCeEEEEeC
Q psy5806 558 IAVNPIGGIMYWCS-WGDLHKIEMAGMDGSHR--HILA-SDSLKNPTGLA-IDLENSRLYWANV 616 (1332)
Q Consensus 558 iavdp~~G~lywtd-~g~~~~I~r~~~dG~~~--~~l~-~~~l~~p~gla-iD~~~~rLYw~d~ 616 (1332)
.++|- +|.+-|+- .+....+-.+.+|.... +++. .+.-..|.|.+ .|..++.++|--.
T Consensus 346 ~~iD~-dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~ 408 (591)
T 2zux_A 346 MAVDH-DGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVY 408 (591)
T ss_dssp EEECT-TSCEEEECSCCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred eEECC-CCCEeeeCCCCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcC
Confidence 46775 57777775 34456788888887642 3333 33323455654 4667777777643
No 473
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=24.91 E-value=1e+03 Score=29.19 Aligned_cols=187 Identities=14% Similarity=0.081 Sum_probs=104.7
Q ss_pred ceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEeecC-----CCCceeeEEEecCCeEEEEcCCCceEEEEeeCC
Q psy5806 1046 SSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIPLMN-----DTIRDNFVIDWVANNIYYIDSQMHTINVARSDG 1120 (1332)
Q Consensus 1046 ~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~~~~-----~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG 1120 (1332)
.+.+|.-|.. +.||+.. . +-|.+++..++.......... ......|..| ..++|+++... +.+.+++.+.
T Consensus 374 ~v~~i~~d~~-g~lWigt-~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d-~~g~lWigT~~-~Gl~~~~~~~ 448 (758)
T 3ott_A 374 RIRHIYEDKE-QQLWIAT-D-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFED-TAGQLWISTCL-GGIFVVDKHK 448 (758)
T ss_dssp CEEEEEECTT-SCEEEEE-T-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEEC-TTSEEEEEESS-SCEEEEEHHH
T ss_pred ceEEEEECCC-CCEEEEe-C-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEc-CCCCEEEEECC-CceEEEcccc
Confidence 3567776754 5687765 3 468888865322111111111 1235567777 35778776543 3455565432
Q ss_pred ------c-eE--EEE--ecCC--CCceEEEEcCCCcEEEE--EecCCCCCCCCCcEEEEecCCCceEEEEecCC---CCc
Q psy5806 1121 ------Q-HK--KIL--VNDL--MEPLAIAVYPRRGLLFY--SHWGLYDNSPTTKIEKVYLDGSYRTVLVEEDL---AFP 1182 (1332)
Q Consensus 1121 ------~-~~--~~~--~~~~--~~P~~iavdp~~g~Lyw--td~~~~~~~~~~~I~r~~ldG~~~~~l~~~~l---~~p 1182 (1332)
. .. ... ..++ ...++|..|+ +|.|++ +..+ -|.+.+......+.+....+ ..+
T Consensus 449 ~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi~~~t~~--------Gl~~~d~~~~~~~~~~~~~~~~~~~~ 519 (758)
T 3ott_A 449 LMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDN-EGNVWVLLYNNK--------GIDKINPRTREVTKLFADELTGEKSP 519 (758)
T ss_dssp HHHCCSSEEECSEEECGGGTCSCSCEEEEEECT-TSCEEEEETTCS--------SEEEEETTTTEEEEECTTTSCGGGCE
T ss_pred ccccCCcceecccccccccccccceeeeEEEcC-CCCEEEEccCCC--------CcEEEeCCCCceEEecCCCcCCCccc
Confidence 1 11 111 1222 2478899998 788876 3222 38888886544443322111 346
Q ss_pred ceEEEecCCCEEEEEEcCCCeEEEEecCCCceEEEE-e---ecccceEEEecCCccccccEEEEEECCCCEEEEEEecCC
Q psy5806 1183 NELAIDFKQRRLFWADSTNKRIEYCDFFGRSRKIVI-S---KVAPYGLSVRQSPGKAFIVELYWTDWEAMSVVIAREKSD 1258 (1332)
Q Consensus 1183 ~glaiD~~~~~LY~~d~~~~~I~~~d~dG~~~~~~~-~---~~~P~glav~~~~~~~~~~~lYwtd~~~~~V~~~~~~~g 1258 (1332)
+.|..| ..++|+++.. +-|.+++......+.+. . ...+.+|.. .++.||++. .+.|.++++.+.
T Consensus 520 ~~i~~d-~~g~lWigt~--~Gl~~~~~~~~~~~~~~~~gl~~~~i~~i~~-------~~g~lWi~t--~~Gl~~~~~~~~ 587 (758)
T 3ott_A 520 NYLLCD-EDGLLWVGFH--GGVMRINPKDESQQSISFGSFSNNEILSMTC-------VKNSIWVST--TNGLWIIDRKTM 587 (758)
T ss_dssp EEEEEC-TTSCEEEEET--TEEEEECC--CCCCBCCCCC---CCEEEEEE-------ETTEEEEEE--SSCEEEEETTTC
T ss_pred ceEEEC-CCCCEEEEec--CceEEEecCCCceEEecccCCCccceEEEEE-------CCCCEEEEC--CCCeEEEcCCCc
Confidence 678888 5678888753 45888887644322221 1 344667766 578898887 356888887664
No 474
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=24.85 E-value=45 Score=33.43 Aligned_cols=23 Identities=26% Similarity=0.934 Sum_probs=18.2
Q ss_pred eeccC-CCceEEeCCCCceecCCCCCcC
Q psy5806 404 ICLPN-KHRFTCQCPLGLTLSPDNKSCS 430 (1332)
Q Consensus 404 lCl~~-~~~~~C~C~~G~~L~~d~~tC~ 430 (1332)
.|++. +++|+|.|+.||+ |..|+
T Consensus 145 ~C~~~~~~~~~C~C~~G~~----G~~Ce 168 (169)
T 2vj2_A 145 TCSNTGPDKYQCSCPEGYS----GPNCE 168 (169)
T ss_dssp EEEECSTTCEEEECCTTCC----STTSC
T ss_pred EEcCCCCCCcEeECCCCCc----CcCcC
Confidence 67775 7899999999997 55563
No 475
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=24.64 E-value=6.5e+02 Score=26.71 Aligned_cols=185 Identities=12% Similarity=0.102 Sum_probs=99.6
Q ss_pred CcEEEEEeC----CCCeEEEEECCCCCCceeEeecCCCCc-eeeEEEecCCeEEEEcCC------CceEEEEeeCCceEE
Q psy5806 1056 KNLIYFADM----RSGNLRTFDMSDSTRIKPIPLMNDTIR-DNFVIDWVANNIYYIDSQ------MHTINVARSDGQHKK 1124 (1332)
Q Consensus 1056 ~~~lY~sd~----~~~~I~~~~l~~g~~~~~i~~~~~~~p-~glAvDw~~~~LY~td~~------~~~I~v~~ldG~~~~ 1124 (1332)
+++||+.-. ..+.+.++++... ....+. ....| .+.+.--.++.||+.-.. .+.+.++++....=+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~--~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKD--SWYSKL-GPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTT--EEEEEE-CCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCC--eEEECC-CCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 567888743 2356788886532 222222 12111 222222348899997432 346788887754322
Q ss_pred EEecCCCCce---EEEEcCCCcEEEEEecCCCCCCC----CCcEEEEecCCCceEEEEecCCCCc---ceEEEecCCCEE
Q psy5806 1125 ILVNDLMEPL---AIAVYPRRGLLFYSHWGLYDNSP----TTKIEKVYLDGSYRTVLVEEDLAFP---NELAIDFKQRRL 1194 (1332)
Q Consensus 1125 ~~~~~~~~P~---~iavdp~~g~Lywtd~~~~~~~~----~~~I~r~~ldG~~~~~l~~~~l~~p---~glaiD~~~~~L 1194 (1332)
.+ ..+..|+ ++++. ++.||+.--.. .... ...+++.++....-+.+-. +..| .++++ .+++|
T Consensus 132 ~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~-~~~~~~~~~~~~~~yd~~~~~W~~~~~--~p~~r~~~~~~~--~~~~i 203 (306)
T 3ii7_A 132 TK-PSMLTQRCSHGMVEA--NGLIYVCGGSL-GNNVSGRVLNSCEVYDPATETWTELCP--MIEARKNHGLVF--VKDKI 203 (306)
T ss_dssp EE-CCCSSCCBSCEEEEE--TTEEEEECCEE-SCTTTCEECCCEEEEETTTTEEEEECC--CSSCCBSCEEEE--ETTEE
T ss_pred eC-CCCcCCcceeEEEEE--CCEEEEECCCC-CCCCcccccceEEEeCCCCCeEEECCC--ccchhhcceEEE--ECCEE
Confidence 22 1222222 23332 67899874211 0111 4679999987665444422 2222 12333 26789
Q ss_pred EEEEcC-----CCeEEEEecCCCceEEEEe---ecccceEEEecCCccccccEEEEEEC-----CCCEEEEEEecCC
Q psy5806 1195 FWADST-----NKRIEYCDFFGRSRKIVIS---KVAPYGLSVRQSPGKAFIVELYWTDW-----EAMSVVIAREKSD 1258 (1332)
Q Consensus 1195 Y~~d~~-----~~~I~~~d~dG~~~~~~~~---~~~P~glav~~~~~~~~~~~lYwtd~-----~~~~V~~~~~~~g 1258 (1332)
|+.-.. .+.|+++|+.....+.+.. ...-.++++ .++.||+.-- ..+.|.+.|..+.
T Consensus 204 ~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-------~~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 204 FAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAA-------VGSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEE-------ETTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred EEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEE-------ECCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 988321 3679999987665554433 222346677 7888998864 3356667766554
No 476
>1bx7_A Hirustasin; anti-coagulant, peptidic inhibitors, conformational flexibility, serine protease inhibitor; 1.20A {Hirudo medicinalis} SCOP: g.3.15.1 PDB: 1bx8_A 1hia_I
Probab=24.13 E-value=77 Score=24.85 Aligned_cols=39 Identities=28% Similarity=0.730 Sum_probs=27.5
Q ss_pred CCCCCCCCCEEecCCCEEEeeeecCCCCCCCCC--CCccccccc
Q psy5806 55 PPKKCSPDEHRCTTGHCILKTWLCDGIPDCSLG--EDERNCNKT 96 (1332)
Q Consensus 55 ~~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~Dg--sDE~~C~~~ 96 (1332)
...+|++.+ .|.+++|+=....|. .-|+.| -||.+|+..
T Consensus 7 g~~tcs~aq-~c~~~kcvC~~~~Cr--i~Cp~GFk~DeNGCe~~ 47 (55)
T 1bx7_A 7 GGETCSAAQ-VCLKGKCVCNEVHCR--IRCKYGLKKDENGCEYP 47 (55)
T ss_dssp TTBCCCTTE-EEETTEEEECCCCCC--CCCTTCBCCCTTSCCCS
T ss_pred CccccChhh-EEecCcEEeehhheE--EeCCCcceECCCCCcce
Confidence 456787765 588888887777776 456654 688888653
No 477
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=23.65 E-value=27 Score=34.61 Aligned_cols=32 Identities=28% Similarity=0.644 Sum_probs=24.4
Q ss_pred CCcccCCCCCCccccccCCCCccccCCCCeeEccCCccccc
Q psy5806 969 PNACGSNNGGCSHLCLRNPTNFTCACPTGILLSADRRSCFS 1009 (1332)
Q Consensus 969 ~n~C~~~nGgCshlCl~~p~~~~C~Cp~g~~l~~d~~tC~~ 1009 (1332)
.+||+. + ..|..+.++|+|.|+.||. |..|+.
T Consensus 124 ~~~C~~--~---g~C~~~~~~~~c~C~~g~~----G~~Ce~ 155 (162)
T 1g1s_A 124 DMSCSK--Q---GECLETIGNYTCSCYPGFY----GPECEY 155 (162)
T ss_dssp TTGGGG--S---EEEEECSSSEEEEECTTEE----STTSCE
T ss_pred CCCCCC--C---CEEecCCCCceEeCCCCCc----Cccccc
Confidence 567753 2 2588888899999999998 567874
No 478
>3bg4_D Guamerin; chymotrypsin, elastase, inhibitor, digestion, hydrolase, protease, secreted, serine protease, zymogen, protease inhibitor; 2.50A {Hirudo nipponia}
Probab=23.09 E-value=70 Score=25.06 Aligned_cols=38 Identities=32% Similarity=0.646 Sum_probs=27.8
Q ss_pred CCCCCCCCCEEecCCCEEEeeeecCCCCCCCCC--CCcccccc
Q psy5806 55 PPKKCSPDEHRCTTGHCILKTWLCDGIPDCSLG--EDERNCNK 95 (1332)
Q Consensus 55 ~~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~Dg--sDE~~C~~ 95 (1332)
...+|++.+ .|.+++|.=....|. .-|+.| -||.+|+.
T Consensus 13 g~~TCseaq-vCl~~kcvC~d~~Cr--~~CpnGfK~DenGCe~ 52 (57)
T 3bg4_D 13 GEKTCSPAQ-VCLNNECACTAIRCM--IFCPNGFKVDENGCEY 52 (57)
T ss_dssp CSSCCCTTE-EECSSSEEECSEEES--CCCTTCEEECTTSCEE
T ss_pred CCeeccHHH-eeecCceeeccceee--eeCCCCccCcCCCCcc
Confidence 456788765 688888888888887 457765 57888854
No 479
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=21.26 E-value=9.3e+02 Score=27.25 Aligned_cols=137 Identities=11% Similarity=0.109 Sum_probs=0.0
Q ss_pred EEEEeecceEEEEeCCCCC---------CCC-cccccCCccceEEEEEeCCCcEEEEEeCCCCeEEEEECCCCCCceeEe
Q psy5806 1015 LLYTSRFGVIRRISLDTAD---------LLP-VTLPFPEYMSSIFFDYHYSKNLIYFADMRSGNLRTFDMSDSTRIKPIP 1084 (1332)
Q Consensus 1015 ll~~~~~~~i~~i~l~~~~---------~~~-~~~pi~~~~~~~~id~d~~~~~lY~sd~~~~~I~~~~l~~g~~~~~i~ 1084 (1332)
++++.....++..+++... ... ...+++. +..|+| .++.||+. ..+.|..+++.+......+.
T Consensus 51 ll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~---V~~l~f--d~~~L~v~--~~~~l~v~dv~sl~~~~~~~ 123 (388)
T 1xip_A 51 LFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD---VIFVCF--HGDQVLVS--TRNALYSLDLEELSEFRTVT 123 (388)
T ss_dssp EEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT---EEEEEE--ETTEEEEE--ESSEEEEEESSSTTCEEEEE
T ss_pred EEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC---eeEEEE--CCCEEEEE--cCCcEEEEEchhhhccCccc
Q ss_pred ecCCCCceeeEEEecCCeEEEEcCCCceEEEEeeCCceEEEEecCCCCceEEEEcCCCcEEEEEecCCCCCCCCCcEEEE
Q psy5806 1085 LMNDTIRDNFVIDWVANNIYYIDSQMHTINVARSDGQHKKILVNDLMEPLAIAVYPRRGLLFYSHWGLYDNSPTTKIEKV 1164 (1332)
Q Consensus 1085 ~~~~~~p~glAvDw~~~~LY~td~~~~~I~v~~ldG~~~~~~~~~~~~P~~iavdp~~g~Lywtd~~~~~~~~~~~I~r~ 1164 (1332)
......- .+-+...+ +.+-...+.|.++++.......+..+. +.++.+| +| ++..-..+ +|...
T Consensus 124 ~~~~~v~---~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~~~~~V---s~v~WSp-kG-~~vg~~dg-------~i~~~ 187 (388)
T 1xip_A 124 SFEKPVF---QLKNVNNT-LVILNSVNDLSALDLRTKSTKQLAQNV---TSFDVTN-SQ-LAVLLKDR-------SFQSF 187 (388)
T ss_dssp ECSSCEE---EEEECSSE-EEEEETTSEEEEEETTTCCEEEEEESE---EEEEECS-SE-EEEEETTS-------CEEEE
T ss_pred eeeccee---eEEecCCC-EEEEECCCCEEEEEccCCccccccCCc---eEEEEcC-Cc-eEEEEcCC-------cEEEE
Q ss_pred ecCCCc---eEEE
Q psy5806 1165 YLDGSY---RTVL 1174 (1332)
Q Consensus 1165 ~ldG~~---~~~l 1174 (1332)
..++.. ...|
T Consensus 188 ~~~~~~~~~k~~I 200 (388)
T 1xip_A 188 AWRNGEMEKQFEF 200 (388)
T ss_dssp EEETTEEEEEEEE
T ss_pred cCCCcccccccee
No 480
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=20.22 E-value=1.4e+02 Score=40.24 Aligned_cols=34 Identities=26% Similarity=0.672 Sum_probs=0.0
Q ss_pred ccCCCCccee--eeccCCCceEEeCCC-CceecCCCCCcCC
Q psy5806 394 SHCAPKVCSH--ICLPNKHRFTCQCPL-GLTLSPDNKSCSE 431 (1332)
Q Consensus 394 n~C~~g~Csh--lCl~~~~~~~C~C~~-G~~L~~d~~tC~~ 431 (1332)
|+|..+.|.+ .|.+..++++|.||. ||. |..|+.
T Consensus 191 ~~~~~~~C~ngg~C~~~~~~~~C~C~~~g~~----G~~Ce~ 227 (1245)
T 3qcw_A 191 EEGEGGVCLNGGVCSVVDDQAVCDCSRTGFR----GKDCSQ 227 (1245)
T ss_dssp -----------------------------------------
T ss_pred ccCCCCCCCCCCCCccCCCCceeECCCCCcc----CCcccc
Confidence 4344344542 677778899999996 885 678874
No 481
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=20.16 E-value=40 Score=30.44 Aligned_cols=31 Identities=39% Similarity=0.830 Sum_probs=24.6
Q ss_pred CCCcCCCCCCcc--ccccCCC----CCceeeCCCCcc
Q psy5806 664 HPCNENNGGCSH--LCLIAPK----DGIRCVCPAGNL 694 (1332)
Q Consensus 664 ~pC~~~nggCs~--lCl~~~~----~~~~C~Cp~g~~ 694 (1332)
++|..+||||.. -|..... ...+|.|..|+.
T Consensus 47 ~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 47 PTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred CChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 799999999985 7877732 478999988863
No 482
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=20.15 E-value=8.1e+02 Score=26.13 Aligned_cols=132 Identities=11% Similarity=0.010 Sum_probs=72.6
Q ss_pred cCCeEEEEcCC--------CceEEEEeeCCceEEEEecCCCCce---EEEEcCCCcEEEEEecCCCCCCCCCcEEEEecC
Q psy5806 1099 VANNIYYIDSQ--------MHTINVARSDGQHKKILVNDLMEPL---AIAVYPRRGLLFYSHWGLYDNSPTTKIEKVYLD 1167 (1332)
Q Consensus 1099 ~~~~LY~td~~--------~~~I~v~~ldG~~~~~~~~~~~~P~---~iavdp~~g~Lywtd~~~~~~~~~~~I~r~~ld 1167 (1332)
.++.||+.-.. .+.+.+.++....=+.+. .+..|+ +.++ .++.||+.--..........+++.++.
T Consensus 97 ~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~ 173 (315)
T 4asc_A 97 ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD-PLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPK 173 (315)
T ss_dssp ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC-CCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETT
T ss_pred ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC-CCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCC
Confidence 48999997441 345777877654322221 222222 2333 366898884221112234679999887
Q ss_pred CCceEEEEecCCCCcc---eEEEecCCCEEEEEEcC-----CCeEEEEecCCCceEEEEee---cccceEEEecCCcccc
Q psy5806 1168 GSYRTVLVEEDLAFPN---ELAIDFKQRRLFWADST-----NKRIEYCDFFGRSRKIVISK---VAPYGLSVRQSPGKAF 1236 (1332)
Q Consensus 1168 G~~~~~l~~~~l~~p~---glaiD~~~~~LY~~d~~-----~~~I~~~d~dG~~~~~~~~~---~~P~glav~~~~~~~~ 1236 (1332)
...-+.+- .+..|. +.++ -+++||+.-.. .+.++++|+.....+.+.+. ..-.++++ .
T Consensus 174 ~~~W~~~~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-------~ 242 (315)
T 4asc_A 174 KFEWKELA--PMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS-------L 242 (315)
T ss_dssp TTEEEECC--CCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-------E
T ss_pred CCeEEECC--CCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE-------E
Confidence 65443332 222221 2232 26789988432 34688988876655555442 22235666 7
Q ss_pred ccEEEEEE
Q psy5806 1237 IVELYWTD 1244 (1332)
Q Consensus 1237 ~~~lYwtd 1244 (1332)
++.||+.-
T Consensus 243 ~~~l~v~G 250 (315)
T 4asc_A 243 VGTLYAIG 250 (315)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEC
Confidence 88888874
No 483
>1eja_B Bdellastasin; complex (hydrolase/inhibitor), hydrolase, inhibitor, antistasin, trypsin; 2.70A {Hirudo medicinalis} SCOP: g.3.15.1 PDB: 1c9t_G 1c9p_B
Probab=20.04 E-value=54 Score=26.08 Aligned_cols=39 Identities=26% Similarity=0.737 Sum_probs=27.3
Q ss_pred CCCCCCCCCEEecCCCEEEeeeecCCCCCCCCC--CCccccccc
Q psy5806 55 PPKKCSPDEHRCTTGHCILKTWLCDGIPDCSLG--EDERNCNKT 96 (1332)
Q Consensus 55 ~~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC~Dg--sDE~~C~~~ 96 (1332)
...+|++.+ .|.+++|+=....|. .-|+.| -||.+|+..
T Consensus 11 g~~tCs~aq-~c~~~kcvC~~~~Cr--i~CP~Gfk~DENGCe~~ 51 (59)
T 1eja_B 11 GPVTCSGAQ-MCEVDKCVCSDLHCK--VKCEHGFKKDDNGCEYA 51 (59)
T ss_dssp TTEEECTTC-EEETTEEECCCEEES--CCCTTCBCCCSSCSCCT
T ss_pred CCcccccce-eeecCceecccccee--EeCCCcccccCCCCcce
Confidence 455677665 577888887777776 457765 688888653
Done!