RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5810
(250 letters)
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 47.2 bits (111), Expect = 2e-07
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 6/136 (4%)
Query: 79 FVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHP------DVFVIVYSVIER 132
F++ Y P + + + + F++VYS++ +
Sbjct: 28 FIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQ 87
Query: 133 KTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWGVKFVETSV 192
++F+ + M + K + VILV NK DLE R+V+ S+G+ LA WG F+ETS
Sbjct: 88 QSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSSEGRALAEEWGCPFMETSA 147
Query: 193 GLVYKTDELLVGIARQ 208
DEL I RQ
Sbjct: 148 KSKTMVDELFAEIVRQ 163
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 42.8 bits (100), Expect = 9e-06
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 121 DVFVIVYSVIERKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLA 180
++VY + K+F + ++ + + + +++ NK D+ +RQV+ G+KLA
Sbjct: 80 MGIMLVYDITNEKSFDNIRNWIRNIEEHASA-DVEKMILGNKCDVNDKRQVSKERGEKLA 138
Query: 181 YAWGVKFVETSVGLVYKTDELLVGIARQAGLNKKRNK 217
+G+KF+ETS + +AR + K +K
Sbjct: 139 LDYGIKFMETSAKANINVENAFFTLARD--IKAKMDK 173
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 41.4 bits (96), Expect = 3e-05
Identities = 30/175 (17%), Positives = 59/175 (33%), Gaps = 6/175 (3%)
Query: 49 YHHVF-FIVHSDTNHTQRCLTSMPFCSQVENFVQTYHPDVFFIVYSDTNHTQRCLTPMPF 107
Y ++F ++ D+ + L S ++ ++ F +
Sbjct: 1 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 60
Query: 108 CSQVE----NFVQTYHPDVFVIVYSVIERKTFKKAEDMLKTLWDSKYIGEKAVILVANKA 163
Q ++VY + + T++ E LK L D ++LV NK+
Sbjct: 61 AGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD-HADSNIVIMLVGNKS 119
Query: 164 DLERRRQVTHSDGKKLAYAWGVKFVETSVGLVYKTDELLVGIARQAGLNKKRNKL 218
DL R V + + A + F+ETS +E I + + ++
Sbjct: 120 DLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 174
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 39.9 bits (92), Expect = 8e-05
Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 6/136 (4%)
Query: 79 FVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVEN------FVQTYHPDVFVIVYSVIER 132
FV+ Y P + + + + F+ V+S+ E
Sbjct: 29 FVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEM 88
Query: 133 KTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWGVKFVETSV 192
++F D + + K +LV NK+DLE +RQV+ + K A W V +VETS
Sbjct: 89 ESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRADQWNVNYVETSA 148
Query: 193 GLVYKTDELLVGIARQ 208
D++ + R+
Sbjct: 149 KTRANVDKVFFDLMRE 164
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 39.5 bits (91), Expect = 1e-04
Identities = 35/166 (21%), Positives = 63/166 (37%), Gaps = 8/166 (4%)
Query: 49 YHHVF-FIVHSDTNHTQRCLTSMPFCSQVENFVQTYHPDVFFIVYSDTNHTQRCLTPMPF 107
Y ++F +I+ D + CL F + + V F Q+ +
Sbjct: 1 YSYIFKYIIIGDMGVGKSCLLHQ-FTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 59
Query: 108 CSQVENFVQTYH-----PDVFVIVYSVIERKTFKKAEDMLKTLWDSKYIGEKAVILVANK 162
+ E F ++VY + R T+ L + +IL+ NK
Sbjct: 60 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTV-IILIGNK 118
Query: 163 ADLERRRQVTHSDGKKLAYAWGVKFVETSVGLVYKTDELLVGIARQ 208
ADLE +R VT+ + K+ A G+ F+E S ++ + A++
Sbjct: 119 ADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKK 164
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 39.1 bits (90), Expect = 1e-04
Identities = 28/144 (19%), Positives = 49/144 (34%), Gaps = 1/144 (0%)
Query: 65 RCLTSMPFCSQVENFVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHPDVFV 124
T F + + + Q T + +
Sbjct: 21 LQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGAL 80
Query: 125 IVYSVIERKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWG 184
+VY + R+TF L+ ++L+ NK+DLE RR V +G+ A G
Sbjct: 81 LVYDITRRETFNHLTSWLEDA-RQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHG 139
Query: 185 VKFVETSVGLVYKTDELLVGIARQ 208
+ F+ETS +E + A++
Sbjct: 140 LIFMETSAKTACNVEEAFINTAKE 163
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 37.7 bits (86), Expect = 4e-04
Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 10/145 (6%)
Query: 79 FVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHPDVFVIVYSVIERKTFKKA 138
F ++Y P V + + T + + ++ I +
Sbjct: 27 FRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSR 86
Query: 139 EDMLKTLWDSKYIGEKA-------VILVANKADLERRRQVTHSDGKKLAYAWGVKFVETS 191
+ + + + I E ++LV NK D R+V S+ + LA W F+ETS
Sbjct: 87 QSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPSREVQSSEAEALARTWKCAFMETS 146
Query: 192 VGLVYKTDELLVGIARQAGLNKKRN 216
L + EL + K+R
Sbjct: 147 AKLNHNVKELFQELLNLE---KRRT 168
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 37.7 bits (86), Expect = 5e-04
Identities = 23/136 (16%), Positives = 48/136 (35%), Gaps = 7/136 (5%)
Query: 79 FVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHP------DVFVIVYSVIER 132
FV Y P + + + + F+ V+++
Sbjct: 28 FVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNT 87
Query: 133 KTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWGVKFVETSV 192
K+F+ + + K + ++LV NK D R V + LA ++G+ ++ETS
Sbjct: 88 KSFEDIHQYREQIKRVKDSDDVPMVLVGNKCD-LAARTVESRQAQDLARSYGIPYIETSA 146
Query: 193 GLVYKTDELLVGIARQ 208
++ + R+
Sbjct: 147 KTRQGVEDAFYTLVRE 162
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 37.3 bits (85), Expect = 6e-04
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 79 FVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHP------DVFVIVYSVIER 132
FV Y P + T + + + D F+IVYSV ++
Sbjct: 29 FVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDK 88
Query: 133 KTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWGVKFVETS 191
+F+ + + + K +ILVANK DL R+VT GK++A + + ++ETS
Sbjct: 89 ASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETS 147
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 36.8 bits (84), Expect = 9e-04
Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 1/137 (0%)
Query: 72 FCSQVENFVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHPDVFVIVYSVIE 131
F + + + + T + + ++VY + +
Sbjct: 28 FNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITD 87
Query: 132 RKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWGVKFVETS 191
+F+K ++ +K L + +V NK DLE+ R V+ + + A + G K TS
Sbjct: 88 EDSFQKVKNWVKELRKMLGNEIC-LCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTS 146
Query: 192 VGLVYKTDELLVGIARQ 208
+EL + + ++
Sbjct: 147 AKQNKGIEELFLDLCKR 163
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 36.6 bits (83), Expect = 0.001
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 6/136 (4%)
Query: 79 FVQTYHPD--VFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHP----DVFVIVYSVIER 132
FV Y P + + L + Q E + F++V+SV +R
Sbjct: 30 FVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDR 89
Query: 133 KTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWGVKFVETSV 192
+F++ + + K E +IL+ NKADL+ +RQVT +G++LA V ++E S
Sbjct: 90 GSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASA 149
Query: 193 GLVYKTDELLVGIARQ 208
+ D+ + R
Sbjct: 150 KIRMNVDQAFHELVRV 165
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 36.4 bits (83), Expect = 0.001
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Query: 119 HPDVFVIVYSVIERKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKK 178
++VY V R TF K ++ L L + +LV NK D + R+V ++G K
Sbjct: 79 GAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KENREVDRNEGLK 137
Query: 179 LAYAWGVKFVETSVGLVYKTDELLVGIARQ 208
A + F+E S + +
Sbjct: 138 FARKHSMLFIEASAKTCDGVQCAFEELVEK 167
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 35.8 bits (81), Expect = 0.002
Identities = 30/142 (21%), Positives = 57/142 (40%), Gaps = 2/142 (1%)
Query: 76 VENFVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHPD--VFVIVYSVIERK 133
V ++ T I D + + + + Y F++V+++ +R+
Sbjct: 32 VSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQ 91
Query: 134 TFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWGVKFVETSVG 193
+F + + + K + V+LV NKADLE +RQV S+ + V + E S
Sbjct: 92 SFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAK 151
Query: 194 LVYKTDELLVGIARQAGLNKKR 215
L DE + R +++
Sbjct: 152 LRLNVDEAFEQLVRAVRKYQEQ 173
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 36.0 bits (82), Expect = 0.002
Identities = 18/95 (18%), Positives = 45/95 (47%)
Query: 121 DVFVIVYSVIERKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLA 180
F++++ + +++F + + L + Y ++L+ NKADL +R+V ++LA
Sbjct: 89 MGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARELA 148
Query: 181 YAWGVKFVETSVGLVYKTDELLVGIARQAGLNKKR 215
+G+ + ETS ++ + + ++
Sbjct: 149 DKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQ 183
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 35.3 bits (80), Expect = 0.002
Identities = 32/137 (23%), Positives = 51/137 (37%), Gaps = 7/137 (5%)
Query: 79 FVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHP------DVFVIVYSVIER 132
FV+ Y P + + + F +VYS+ +
Sbjct: 28 FVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQ 87
Query: 133 KTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAW-GVKFVETS 191
TF +D+ + + K + +ILV NK DLE R V G+ LA W F+E+S
Sbjct: 88 STFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESS 147
Query: 192 VGLVYKTDELLVGIARQ 208
+E+ + RQ
Sbjct: 148 AKSKINVNEIFYDLVRQ 164
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 35.2 bits (80), Expect = 0.003
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 121 DVFVIVYSVIERKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLA 180
+++Y V + +F + T + A++L+ NK D R V DG+KLA
Sbjct: 81 HALLLLYDVTNKASFDNIQ-AWLTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLA 139
Query: 181 YAWGVKFVETSVGLVYKTDELLVGIARQ 208
+G+ F+ETS D IA++
Sbjct: 140 KEYGLPFMETSAKTGLNVDLAFTAIAKE 167
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 35.0 bits (79), Expect = 0.003
Identities = 23/126 (18%), Positives = 37/126 (29%), Gaps = 1/126 (0%)
Query: 67 LTSMPFCSQVENFVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYH-PDVFVI 125
+ F + E + + + + Q T + Y V
Sbjct: 22 FCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVF 81
Query: 126 VYSVIERKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWGV 185
VY + +F ++ + ILV NK DL QV +K A +
Sbjct: 82 VYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSM 141
Query: 186 KFVETS 191
ETS
Sbjct: 142 PLFETS 147
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 34.5 bits (78), Expect = 0.005
Identities = 37/175 (21%), Positives = 61/175 (34%), Gaps = 7/175 (4%)
Query: 48 TYHHVF-FIVHSDTNHTQRCLTSMPFCSQVENFVQTYHPDVFFIVYSDTNHTQRCLTPMP 106
TY +F F+V + + CL + ++ F + L
Sbjct: 1 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 60
Query: 107 FCSQVENFVQT----YHPDVFVIVYSVIERKTFKKAEDMLKTLWDSKYIGEKAVILVANK 162
Q T ++VY + R+T+ + L +IL NK
Sbjct: 61 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTD-ARMLASQNIVIILCGNK 119
Query: 163 ADLERRRQVTHSDGKKLAYAWGVKFVETSVGLVYKTDELLVGIARQAGLNKKRNK 217
DL+ R+VT + + A + F+ETS +E V AR+ LNK +
Sbjct: 120 KDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKI-LNKIESG 173
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 34.2 bits (77), Expect = 0.006
Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 1/117 (0%)
Query: 76 VENFVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHP-DVFVIVYSVIERKT 134
+ + T D + + FV+VY + +R +
Sbjct: 28 IWEYDPTLESTYRHQATIDDEVVSMEILDTAGQEDTIQREGHMRWGEGFVLVYDITDRGS 87
Query: 135 FKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWGVKFVETS 191
F++ + L + K +ILV NKADL+ RQV+ +G+KLA F E S
Sbjct: 88 FEEVLPLKNILDEIKKPKNVTLILVGNKADLDHSRQVSTEEGEKLATELACAFYECS 144
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 33.4 bits (75), Expect = 0.012
Identities = 30/137 (21%), Positives = 57/137 (41%), Gaps = 8/137 (5%)
Query: 79 FVQTYHPDVFFIVYS-----DTNHTQRCLTPMPFCSQVENFVQTYHPD--VFVIVYSVIE 131
F TY + S + + L + + + +Y D V+VY +
Sbjct: 25 FDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITN 84
Query: 132 RKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWGVKFVETS 191
+F++ + + ++ + ++LV NK DL +RQV+ +G++ A V F+ETS
Sbjct: 85 VNSFQQTTKWIDDVR-TERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETS 143
Query: 192 VGLVYKTDELLVGIARQ 208
Y +L +A
Sbjct: 144 AKAGYNVKQLFRRVAAA 160
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 32.8 bits (73), Expect = 0.019
Identities = 37/143 (25%), Positives = 66/143 (46%)
Query: 71 PFCSQVENFVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHPDVFVIVYSVI 130
S E + + + + ++ + D ++IVYS+
Sbjct: 29 SMDSDCEVLGEDTYERTLMVDGESATIILLDMWENKGENEWLHDHCMQVGDAYLIVYSIT 88
Query: 131 ERKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWGVKFVET 190
+R +F+KA ++ L ++ + +ILV NK+DL R R+V+ S+G+ A + KF+ET
Sbjct: 89 DRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVFDCKFIET 148
Query: 191 SVGLVYKTDELLVGIARQAGLNK 213
S + + EL GI RQ L +
Sbjct: 149 SAAVQHNVKELFEGIVRQVRLRR 171
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 32.7 bits (73), Expect = 0.023
Identities = 18/146 (12%), Positives = 47/146 (32%), Gaps = 5/146 (3%)
Query: 79 FVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHPDVFVIVYSVIERKTFKKA 138
+ + Q L + + + + D + V+S+ + +F+
Sbjct: 30 YQVLEKTESEQYKKEMLVDGQTHLVLIREEAGAPDAKFSGWADAVIFVFSLEDENSFQAV 89
Query: 139 EDMLKTL----WDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAY-AWGVKFVETSVG 193
+ L + + A++ ++ R V + + L + ET
Sbjct: 90 SRLHGQLSSLRGEGRGGLALALVGTQDRISASSPRVVGDARARALCADMKRCSYYETCAT 149
Query: 194 LVYKTDELLVGIARQAGLNKKRNKLL 219
D + +A++ +K+ +LL
Sbjct: 150 YGLNVDRVFQEVAQKVVTLRKQQQLL 175
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 32.4 bits (73), Expect = 0.024
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 121 DVFVIVYSVIERKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLA 180
++VY + + +TF + K +++ ++A +L+ R VT G+ LA
Sbjct: 76 MGIILVYDITDERTFTNIKQWFK--TVNEHANDEAQLLLVGNKSDMETRVVTADQGEALA 133
Query: 181 YAWGVKFVETSVGLVYKTDELLVGIARQ 208
G+ F+E+S +E+ +A+
Sbjct: 134 KELGIPFIESSAKNDDNVNEIFFTLAKL 161
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 32.1 bits (72), Expect = 0.042
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 121 DVFVIVYSVIERKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLA 180
+IVY V ++++F + L+ D +LV NK DL+ +R V + K+ A
Sbjct: 80 HGIIIVYDVTDQESFNGVKMWLQE-IDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFA 138
Query: 181 YAWGVKFVETSVGLVYKTDELLVGIARQAGLNKKRNKLLAKKQKK 225
A + F+ETS ++ + +ARQ + + L QKK
Sbjct: 139 DANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETTQKK 183
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 31.9 bits (71), Expect = 0.044
Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 1/142 (0%)
Query: 67 LTSMPFCSQVENFVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHPDVFVIV 126
F + + ++ + T + + +IV
Sbjct: 24 FVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLERFRALAPMYYRGSAAAIIV 83
Query: 127 YSVIERKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWGVK 186
Y + + +TF ++ ++ V + NK DL R+V D K A +
Sbjct: 84 YDITKEETFSTLKNWVRE-LRQHGPPSIVVAIAGNKCDLTDVREVMERDAKDYADSIHAI 142
Query: 187 FVETSVGLVYKTDELLVGIARQ 208
FVETS +EL + I+R+
Sbjct: 143 FVETSAKNAININELFIEISRR 164
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 31.6 bits (70), Expect = 0.047
Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 3/153 (1%)
Query: 65 RCLTSMPFCSQVENFVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHPDVFV 124
R + + E TY + + + + V V
Sbjct: 19 RIFGGVEDGPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDGGRWLPGHCMAMGDAYVIV 78
Query: 125 IVYSVIERKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWG 184
+ + ++ + +ILV NK+DL R R+V+ +G+ A +
Sbjct: 79 YSVTDKGSFEKASELRVQL--RRARQTDDVPIILVGNKSDLVRSREVSVDEGRACAVVFD 136
Query: 185 VKFVETSVGLVYKTDELLVGIARQAGLNKKRNK 217
KF+ETS L + L G+ RQ ++ +K
Sbjct: 137 CKFIETSAALHHNVQALFEGVVRQI-RLRRDSK 168
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 31.2 bits (69), Expect = 0.067
Identities = 16/134 (11%), Positives = 46/134 (34%), Gaps = 3/134 (2%)
Query: 76 VENFVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHPDVFVIVYSVIERKTF 135
+ +V T +V +V+ + + ++ + + + +
Sbjct: 29 EKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSR 88
Query: 136 KKAEDMLKTLWDSKYIGEKAVI-LVANKADLERRRQVTHSDGKKLAYAWGVKFVETSVGL 194
+++ D + E I L NK D++ R+ + +++ + S
Sbjct: 89 VTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRK--VKAKSIVFHRKKNLQYYDISAKS 146
Query: 195 VYKTDELLVGIARQ 208
Y ++ + +AR+
Sbjct: 147 NYNFEKPFLWLARK 160
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 30.4 bits (67), Expect = 0.14
Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 16/153 (10%)
Query: 76 VENFVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHP--DVFVIVYSVIERK 133
EN+V T + DT + L +N +P D +I + + +
Sbjct: 28 PENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPE 87
Query: 134 TFKKAEDMLKTLWDSKYIGEKAVILVANKADLE------------RRRQVTHSDGKKLAY 181
T K ++ ++LV K+DL R+ V++ G +A
Sbjct: 88 TLDSVLKKWKGEIQ-EFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAK 146
Query: 182 AWG-VKFVETSVGLVYKTDELLVGIARQAGLNK 213
G ++E S + + +A A +NK
Sbjct: 147 QIGAATYIECSALQSENSVRDIFHVATLACVNK 179
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 30.1 bits (66), Expect = 0.14
Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 2/136 (1%)
Query: 76 VENFVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHPDVFVIVYSVIER--K 133
V+++ T ++ + L + F QTY D+ + K
Sbjct: 30 VDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIK 89
Query: 134 TFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWGVKFVETSVG 193
+F+ + + L D + ++LV NK DL R +++ +GK LA +W F+E+S
Sbjct: 90 SFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFLESSAK 149
Query: 194 LVYKTDELLVGIARQA 209
++ I +A
Sbjct: 150 ENQTAVDVFRRIILEA 165
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 30.1 bits (66), Expect = 0.19
Identities = 28/150 (18%), Positives = 46/150 (30%), Gaps = 3/150 (2%)
Query: 72 FCSQVENFVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHPDVFVIVYSVIE 131
F +Q + + +V Q T Q D V+V+ V
Sbjct: 27 FSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTA 86
Query: 132 RKTFKKAEDM---LKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWGVKFV 188
TFK + + +++ NK DLE R+ T + +
Sbjct: 87 PNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYF 146
Query: 189 ETSVGLVYKTDELLVGIARQAGLNKKRNKL 218
ETS ++ IAR A + +L
Sbjct: 147 ETSAKEAINVEQAFQTIARNALKQETEVEL 176
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 29.6 bits (65), Expect = 0.24
Identities = 17/137 (12%), Positives = 42/137 (30%), Gaps = 5/137 (3%)
Query: 77 ENFVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHPD--VFVIVYSVIERKT 134
V T F + + + + + ++ + Y + + V +R+
Sbjct: 23 GEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRER 82
Query: 135 FKKAEDMLKTLWDSKYIGEKAVILVANK---ADLERRRQVTHSDGKKLAYAWGVKFVETS 191
+A + L + + + +++ ANK + ++T G T
Sbjct: 83 VNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATC 142
Query: 192 VGLVYKTDELLVGIARQ 208
E L ++ Q
Sbjct: 143 ATSGDGLYEGLDWLSNQ 159
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 29.5 bits (65), Expect = 0.27
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 121 DVFVIVYSVIERKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLA 180
F+++Y + ++F +D + + V+LV NK D+E R V+ G++LA
Sbjct: 79 MGFILMYDITNEESFNAVQDWSTQIKTYSW-DNAQVLLVGNKCDMEDERVVSSERGRQLA 137
Query: 181 YAWGVKFVETSVGLVYKTDELLVGIARQ 208
G +F E S + +
Sbjct: 138 DHLGFEFFEASAKDNINVKQTFERLVDV 165
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 29.4 bits (65), Expect = 0.31
Identities = 19/95 (20%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 121 DVFVIVYSVIERKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLA 180
+ ++ Y + ++F+ + L+ + + +LV NK DL RR+V+ ++ +
Sbjct: 79 NALILTYDITCEESFRCLPEWLREIEQYASN-KVITVLVGNKIDLAERREVSQQRAEEFS 137
Query: 181 YAWGVKFVETSVGLVYKTDELLVGIARQAGLNKKR 215
A + ++ETS ++L + +A + +++ R
Sbjct: 138 EAQDMYYLETSAKESDNVEKLFLDLACRL-ISEAR 171
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 29.2 bits (64), Expect = 0.32
Identities = 9/140 (6%), Positives = 34/140 (24%), Gaps = 3/140 (2%)
Query: 72 FCSQVENFVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHPDVFVIVYSVIE 131
F + + + + + ++V +
Sbjct: 35 FSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTD 94
Query: 132 RKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLE---RRRQVTHSDGKKLAYAWGVKFV 188
R+ + L + + + + +++ ANK D++ +++
Sbjct: 95 RERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQ 154
Query: 189 ETSVGLVYKTDELLVGIARQ 208
+ L + +
Sbjct: 155 ACCALTGEGLCQGLEWMMSR 174
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 29.2 bits (64), Expect = 0.34
Identities = 23/149 (15%), Positives = 40/149 (26%), Gaps = 18/149 (12%)
Query: 79 FVQTYHPDVFFIVYSDTNHTQRC--LTPMPFCSQVENFVQTYHPDVFVIVYSVIERKTFK 136
F Y P VF ++ + L Q + V +
Sbjct: 30 FPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVSLICFSLVSP 89
Query: 137 KAEDMLKTLWD---SKYIGEKAVILVANKADLERRRQVT------------HSDGKKLAY 181
+ + ++ W + +ILV K DL + + G +A
Sbjct: 90 ASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAK 149
Query: 182 AWG-VKFVETSVGLVYKTDELLVGIARQA 209
G VK++E S + R
Sbjct: 150 EIGAVKYLECSALTQRGLKTVFDEAIRAV 178
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 28.9 bits (63), Expect = 0.38
Identities = 22/139 (15%), Positives = 41/139 (29%), Gaps = 9/139 (6%)
Query: 79 FVQTYHPDVFFIVYSDTNHTQRCLTPMP---------FCSQVENFVQTYHPDVFVIVYSV 129
F + P + + F S + + + V +
Sbjct: 28 FAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTK 87
Query: 130 IERKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWGVKFVE 189
+ + SK I V + R+V +G+KLA G+ F E
Sbjct: 88 PQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVAREEGEKLAEEKGLLFFE 147
Query: 190 TSVGLVYKTDELLVGIARQ 208
TS +++ +GI +
Sbjct: 148 TSAKTGENVNDVFLGIGEK 166
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 28.8 bits (63), Expect = 0.44
Identities = 21/146 (14%), Positives = 43/146 (29%), Gaps = 3/146 (2%)
Query: 67 LTSMPFCSQVENFVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHPDVFVIV 126
+ F +Q+ + + + V Q T + D ++
Sbjct: 26 YVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLT 85
Query: 127 YSVIERKTFKKAEDMLKTLW---DSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAW 183
+SV + ++F+ + K D K +++ NK D+ R+ T
Sbjct: 86 FSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISERQVSTEEAQAWCRDNG 145
Query: 184 GVKFVETSVGLVYKTDELLVGIARQA 209
+ ETS R+
Sbjct: 146 DYPYFETSAKDATNVAAAFEEAVRRV 171
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 28.5 bits (62), Expect = 0.49
Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 2/143 (1%)
Query: 67 LTSMPFCSQVENFVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHPDVFVIV 126
F + + + V + T V+V
Sbjct: 22 YCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLV 81
Query: 127 YSVIERKTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWGVK 186
+S +R++F+ + +G+ LV NK DL + + + + LA ++
Sbjct: 82 FSTTDRESFEAISSWRE--KVVAEVGDIPTALVQNKIDLLDDSCIKNEEAEGLAKRLKLR 139
Query: 187 FVETSVGLVYKTDELLVGIARQA 209
F TSV E+ +A +
Sbjct: 140 FYRTSVKEDLNVSEVFKYLAEKH 162
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 27.7 bits (60), Expect = 1.0
Identities = 23/136 (16%), Positives = 42/136 (30%), Gaps = 6/136 (4%)
Query: 79 FVQTYHPDVFFIVYSDTNHT--QRCLTPMPFCSQVENFV----QTYHPDVFVIVYSVIER 132
F + + + T + + E + Y IV I
Sbjct: 31 FHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITN 90
Query: 133 KTFKKAEDMLKTLWDSKYIGEKAVILVANKADLERRRQVTHSDGKKLAYAWGVKFVETSV 192
+ + + L NKADL +R V + + A + F+ETS
Sbjct: 91 EESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSA 150
Query: 193 GLVYKTDELLVGIARQ 208
+E+ + IA++
Sbjct: 151 KTSMNVNEIFMAIAKK 166
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis
[TaxId: 1423]}
Length = 273
Score = 27.5 bits (60), Expect = 1.5
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 149 KYIGEKAVILVANKADL 165
+ K I++ NKAD
Sbjct: 38 DILKNKPRIMLLNKADK 54
>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase,
HppD {Human (Homo sapiens) [TaxId: 9606]}
Length = 149
Score = 26.3 bits (57), Expect = 2.5
Identities = 13/84 (15%), Positives = 28/84 (33%), Gaps = 1/84 (1%)
Query: 49 YHHVFFIVHSDTNHTQRCLTSMPFCSQVENFVQTYHPDVFFIVYSDTNHTQRCLTPM-PF 107
+H V F V + M F ++T +V V + + P+
Sbjct: 12 FHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPW 71
Query: 108 CSQVENFVQTYHPDVFVIVYSVIE 131
++ + + + V I + V +
Sbjct: 72 NKEMGDHLVKHGDGVKDIAFEVED 95
>d2dm9a1 d.81.4.1 (A:81-198) V-type ATP synthase subunit E
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 118
Score = 25.9 bits (57), Expect = 2.8
Identities = 8/50 (16%), Positives = 20/50 (40%), Gaps = 14/50 (28%)
Query: 132 RKTFKKAEDMLKTLWDSKY--------------IGEKAVILVANKADLER 167
++ + L+T+ + +Y + EK V +++N+ L
Sbjct: 4 SSVLEEVKRRLETMSEDEYFESVKALLKEAIKELNEKKVRVMSNEKTLGL 53
>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8
(ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 26.0 bits (56), Expect = 3.0
Identities = 12/87 (13%), Positives = 23/87 (26%), Gaps = 3/87 (3%)
Query: 15 HPDVFFIVYSDTNHTQRCLTSIPFCSTVENFVQTYHHVFFIVHSDTNHTQRCLTSMPFCS 74
P V I + N + C +E + F + H
Sbjct: 31 KPGVLLIYKTQKNGQWVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSIW---AVKGPKG 87
Query: 75 QVENFVQTYHPDVFFIVYSDTNHTQRC 101
+ + P + I+ + + RC
Sbjct: 88 EAVGSITQPLPSSYLIIRATSESDGRC 114
>d1iata_ c.80.1.2 (A:) Phosphoglucose isomerase, PGI {Human (Homo
sapiens) [TaxId: 9606]}
Length = 556
Score = 25.6 bits (55), Expect = 7.3
Identities = 5/24 (20%), Positives = 11/24 (45%)
Query: 197 KTDELLVGIARQAGLNKKRNKLLA 220
+LV +A+ G+ R ++
Sbjct: 62 DVMRMLVDLAKSRGVEAARERMFN 85
>d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal
xylanase z {Clostridium thermocellum [TaxId: 1515]}
Length = 255
Score = 25.0 bits (53), Expect = 8.1
Identities = 10/150 (6%), Positives = 39/150 (26%)
Query: 15 HPDVFFIVYSDTNHTQRCLTSIPFCSTVENFVQTYHHVFFIVHSDTNHTQRCLTSMPFCS 74
+ ++ + + +N + I+ + + + + +
Sbjct: 52 YSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIADGYEN 111
Query: 75 QVENFVQTYHPDVFFIVYSDTNHTQRCLTPMPFCSQVENFVQTYHPDVFVIVYSVIERKT 134
++ + + P + T+ R + + + + D F + +
Sbjct: 112 FTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPN 171
Query: 135 FKKAEDMLKTLWDSKYIGEKAVILVANKAD 164
E + + K + + D
Sbjct: 172 TYPNERLFPDGGKAAREKLKLLFIACGTND 201
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.325 0.135 0.418
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 933,390
Number of extensions: 41329
Number of successful extensions: 202
Number of sequences better than 10.0: 1
Number of HSP's gapped: 200
Number of HSP's successfully gapped: 51
Length of query: 250
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 167
Effective length of database: 1,268,006
Effective search space: 211757002
Effective search space used: 211757002
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.5 bits)