BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5812
(365 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|157954037|ref|NP_001103251.1| ligand-gated chloride channel homolog 3 [Tribolium castaneum]
gi|156447611|gb|ABU63598.1| GABA-gated ion channel [Tribolium castaneum]
gi|270006356|gb|EFA02804.1| ligand-gated chloride channel homolog 3 [Tribolium castaneum]
Length = 480
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 282/309 (91%), Positives = 301/309 (97%)
Query: 35 KKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTIT 94
++S ++RL NVTQTIS+LL GYDIRLRPNFGG+PL VGMDLTIASFD+ISEV+MDYTIT
Sbjct: 24 QRSMVSDRLENVTQTISRLLEGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTIT 83
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MYLNQYWKD+RLAFS+E+E+LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG
Sbjct: 84 MYLNQYWKDERLAFSNEEEILTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 143
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ 214
DG+ITYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTVLDVVMYWKETPVRGVEEA+
Sbjct: 144 DGAITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAE 203
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
LPQFTI+G+ETNDRKE+LATG YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI
Sbjct: 204 LPQFTIIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 263
Query: 275 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV
Sbjct: 264 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 323
Query: 335 NYSYWADRA 343
NY+YW RA
Sbjct: 324 NYTYWGARA 332
>gi|118150482|ref|NP_001071280.1| ligand-gated chloride channel homolog 3 precursor [Apis mellifera]
gi|110555512|gb|ABG75736.1| GABA-gated ion channel [Apis mellifera]
Length = 489
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 281/309 (90%), Positives = 299/309 (96%)
Query: 35 KKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTIT 94
+ + ++RL NVTQTIS++L GYDIRLRPNFGG+PL VGMDLTIASFD+ISEV+MDYTIT
Sbjct: 26 ENTGISDRLENVTQTISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTIT 85
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MYLNQYWKD+RLAFS E+EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL+G
Sbjct: 86 MYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSG 145
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ 214
DGS+TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTVLDVVMYWKETPVRGVEEA+
Sbjct: 146 DGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAE 205
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
LPQFTI+G+ETNDRKEKLATG YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI
Sbjct: 206 LPQFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 265
Query: 275 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV
Sbjct: 266 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 325
Query: 335 NYSYWADRA 343
NY+YW RA
Sbjct: 326 NYTYWGARA 334
>gi|383863330|ref|XP_003707134.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-like [Megachile rotundata]
Length = 508
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 283/321 (88%), Positives = 303/321 (94%), Gaps = 7/321 (2%)
Query: 30 LRLCH-------KKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFD 82
LR+ H + + ++RL NVTQTIS++L GYDIRLRPNFGG+PL VGMDLTIASFD
Sbjct: 14 LRMIHLVAWTNFENTGVSDRLENVTQTISRILDGYDIRLRPNFGGEPLLVGMDLTIASFD 73
Query: 83 SISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHD 142
+ISEV+MDYTITMYLNQYWKD+RLAFS E+EVLTLSGDFAEKIWVPDTFFANDKNSFLHD
Sbjct: 74 AISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHD 133
Query: 143 VTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW 202
VTERNKLVRL+GDGS+TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTVLDVVMYW
Sbjct: 134 VTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYW 193
Query: 203 KETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSI 262
KETPVRGVEEA+LPQFTI+G+ETNDRKE+LATG YQRLSLSFKLQRNIGYFVFQTYLPSI
Sbjct: 194 KETPVRGVEEAELPQFTIIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTYLPSI 253
Query: 263 LIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 322
LIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV
Sbjct: 254 LIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 313
Query: 323 FVFAALLEYAAVNYSYWADRA 343
FVFAALLEYAAVNY+YW RA
Sbjct: 314 FVFAALLEYAAVNYTYWGARA 334
>gi|307200307|gb|EFN80572.1| Gamma-aminobutyric acid receptor subunit beta-like [Harpegnathos
saltator]
Length = 460
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 281/304 (92%), Positives = 296/304 (97%)
Query: 40 TERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQ 99
++RL NVTQTIS++L GYDIRLRPNFGGDPL VGMDLTIASFD+ISEV+MDYTITMYLNQ
Sbjct: 2 SDRLENVTQTISRILDGYDIRLRPNFGGDPLLVGMDLTIASFDAISEVNMDYTITMYLNQ 61
Query: 100 YWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSIT 159
YWKD+RLAFS E EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL+GDGSIT
Sbjct: 62 YWKDERLAFSHEGEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSIT 121
Query: 160 YGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQLPQFT 219
YGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTVLDVVMYWKETPVRGV++A+LPQFT
Sbjct: 122 YGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKETPVRGVKDAELPQFT 181
Query: 220 ILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT 279
I+G+ETNDRKEKLATG YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT
Sbjct: 182 IIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT 241
Query: 280 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY+YW
Sbjct: 242 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYW 301
Query: 340 ADRA 343
RA
Sbjct: 302 GARA 305
>gi|350423047|ref|XP_003493368.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
[Bombus impatiens]
Length = 489
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 279/309 (90%), Positives = 299/309 (96%)
Query: 35 KKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTIT 94
+ + ++RL NVTQTIS++L GYDIRLRPNFGG+PL VGMDLTIASFD+ISEV+MDYTIT
Sbjct: 26 ENTGLSDRLENVTQTISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTIT 85
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MYLNQYWKD+RLAFS E+EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL+G
Sbjct: 86 MYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSG 145
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ 214
DGS+TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTVLDVVMYWK+TPVRGVEEA+
Sbjct: 146 DGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKQTPVRGVEEAE 205
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
LPQFTI+G+ETNDRKE+LATG YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI
Sbjct: 206 LPQFTIIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 265
Query: 275 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV
Sbjct: 266 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 325
Query: 335 NYSYWADRA 343
NY+YW RA
Sbjct: 326 NYTYWGARA 334
>gi|350536015|ref|NP_001234895.1| ligand-gated chloride channel homolog 3 precursor [Nasonia
vitripennis]
gi|269856291|gb|ACZ51428.1| GABA-gated ion channel [Nasonia vitripennis]
Length = 512
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 282/314 (89%), Positives = 299/314 (95%), Gaps = 3/314 (0%)
Query: 33 CHKKSATTE---RLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
C +S +TE RLANVTQTIS++L GYDIRLRPNFGGDPL+V MDLTIASFD+ISEV+M
Sbjct: 35 CFLQSGSTELSDRLANVTQTISRILDGYDIRLRPNFGGDPLFVEMDLTIASFDAISEVNM 94
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITMYLNQYWKD+RLAFS E E+LTLSGDFAEKIWVPDTFFANDK+SFLHDVTERNKL
Sbjct: 95 DYTITMYLNQYWKDERLAFSHEKEILTLSGDFAEKIWVPDTFFANDKHSFLHDVTERNKL 154
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRG 209
VRL GDGS+TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTVLDVVM WKETPVRG
Sbjct: 155 VRLAGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMSWKETPVRG 214
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V+EA+LPQFTI+G+ETNDRKEKLATG YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW
Sbjct: 215 VDEAKLPQFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 274
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL
Sbjct: 275 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 334
Query: 330 EYAAVNYSYWADRA 343
EYAAVNY+YW RA
Sbjct: 335 EYAAVNYTYWGARA 348
>gi|340727433|ref|XP_003402048.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
[Bombus terrestris]
Length = 489
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 279/309 (90%), Positives = 299/309 (96%)
Query: 35 KKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTIT 94
+ + ++RL NVTQTIS++L GYDIRLRPNFGG+PL VGMDLTIASFD+ISEV+MDYTIT
Sbjct: 26 ENTGLSDRLENVTQTISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTIT 85
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MYLNQYWKD+RLAFS E+EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL+G
Sbjct: 86 MYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSG 145
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ 214
DGS+TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTVLDVVMYWK+TPVRGVEEA+
Sbjct: 146 DGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKQTPVRGVEEAE 205
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
LPQFTI+G+ETNDRKE+LATG YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI
Sbjct: 206 LPQFTIIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 265
Query: 275 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV
Sbjct: 266 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 325
Query: 335 NYSYWADRA 343
NY+YW RA
Sbjct: 326 NYTYWGARA 334
>gi|332026036|gb|EGI66187.1| Gamma-aminobutyric acid receptor subunit beta-like protein
[Acromyrmex echinatior]
Length = 460
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 278/304 (91%), Positives = 295/304 (97%)
Query: 40 TERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQ 99
++RL NVTQTIS++L GYDIRLRPNFGGDPL VGMDLTIASFD+ISEV+MDYTITMYLNQ
Sbjct: 2 SDRLENVTQTISRILDGYDIRLRPNFGGDPLRVGMDLTIASFDAISEVNMDYTITMYLNQ 61
Query: 100 YWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSIT 159
YWKD+RLAFS E E+LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL+GDGSIT
Sbjct: 62 YWKDERLAFSHEGEILTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSIT 121
Query: 160 YGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQLPQFT 219
YGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTVLDV+MYWKETPV GV+EA+LPQFT
Sbjct: 122 YGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVLMYWKETPVHGVKEAELPQFT 181
Query: 220 ILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT 279
I+G+ETNDRKEKLATG YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWIN+EAT
Sbjct: 182 IIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINYEAT 241
Query: 280 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY+YW
Sbjct: 242 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYW 301
Query: 340 ADRA 343
RA
Sbjct: 302 GARA 305
>gi|357627557|gb|EHJ77210.1| ligand-gated chloride channel-like protein 3 [Danaus plexippus]
Length = 478
Score = 582 bits (1501), Expect = e-164, Method: Compositional matrix adjust.
Identities = 273/306 (89%), Positives = 293/306 (95%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NVTQT+S++L GYDIRLRPNFGG+PLYVGMDLTIASFD+ISEV+MDYTIT+YLNQYWKD+
Sbjct: 40 NVTQTVSRILDGYDIRLRPNFGGEPLYVGMDLTIASFDAISEVNMDYTITLYLNQYWKDE 99
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F +DEVLTLSGDFA+KIWVPDTFFANDKNSFLHDVTERNKLVRL GDG +TYGMRF
Sbjct: 100 RLGFGMQDEVLTLSGDFADKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGGVTYGMRF 159
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQLPQFTILGHE 224
T TLACMMDLHYYPLD+QNCTVEIESYGYTV DVVMYWK+TPVRGVE+A+LPQF+ILGHE
Sbjct: 160 TATLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKDTPVRGVEDAELPQFSILGHE 219
Query: 225 TNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVA 284
TNDRKEKLATG YQRLSLSFKL+RNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVA
Sbjct: 220 TNDRKEKLATGVYQRLSLSFKLRRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVA 279
Query: 285 LGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAK 344
LGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY+YW RA+
Sbjct: 280 LGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWGARAR 339
Query: 345 KKPKAK 350
K+ K K
Sbjct: 340 KRAKLK 345
>gi|157127002|ref|XP_001661036.1| gamma-aminobutyric-acid receptor a beta subunit 1, 2, 3, putative
[Aedes aegypti]
gi|108873057|gb|EAT37282.1| AAEL010710-PA [Aedes aegypti]
Length = 468
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 271/316 (85%), Positives = 292/316 (92%), Gaps = 15/316 (4%)
Query: 42 RLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYW 101
RL NVTQTIS++L GYDIRLRPNFGGDPL+VGMDLTIASFD+ISEV+MDYTITMYLNQYW
Sbjct: 5 RLENVTQTISRILEGYDIRLRPNFGGDPLHVGMDLTIASFDAISEVNMDYTITMYLNQYW 64
Query: 102 KDDRLAFSSE---------------DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTER 146
KD+RLAF++ ++V+TLSGDFAEKIWVPDTFFANDKNSFLHDVTER
Sbjct: 65 KDERLAFNARQYDQNGDIMIEDDGANDVITLSGDFAEKIWVPDTFFANDKNSFLHDVTER 124
Query: 147 NKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP 206
NKLVRL GDGS+TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTV DV+MYW+ TP
Sbjct: 125 NKLVRLAGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVLMYWRSTP 184
Query: 207 VRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVM 266
+RGVEEA+LPQFTI+G+ETNDRKE+LATG YQRLSLSFKLQRNIGYFVFQTYLPSILIVM
Sbjct: 185 IRGVEEAELPQFTIIGYETNDRKERLATGEYQRLSLSFKLQRNIGYFVFQTYLPSILIVM 244
Query: 267 LSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFA 326
LSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFA
Sbjct: 245 LSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFA 304
Query: 327 ALLEYAAVNYSYWADR 342
ALLEYAAVNY+YW R
Sbjct: 305 ALLEYAAVNYTYWGAR 320
>gi|195457046|ref|XP_002075402.1| GK17727 [Drosophila willistoni]
gi|194171487|gb|EDW86388.1| GK17727 [Drosophila willistoni]
Length = 497
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/321 (84%), Positives = 293/321 (91%), Gaps = 13/321 (4%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C +K RL NVTQTIS++L GYDIRLRPNFGG+PL+VGMDLTIASFD+ISEV+MDYT
Sbjct: 27 CKRKEMLAGRLENVTQTISKILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYT 86
Query: 93 ITMYLNQYWKDDRLAFS-------------SEDEVLTLSGDFAEKIWVPDTFFANDKNSF 139
ITMYLNQYW+D+RLAF+ ++VLTLSGDFAEKIWVPDTFFANDKNSF
Sbjct: 87 ITMYLNQYWRDERLAFNIYGPYYDNDAADDGVNDVLTLSGDFAEKIWVPDTFFANDKNSF 146
Query: 140 LHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVV 199
LHDVTERNKLVRL GDG++TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTV DVV
Sbjct: 147 LHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVV 206
Query: 200 MYWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYL 259
MYWK TPVRGVE+A+LPQFTI+G+ETNDRKE+LATG YQRLSLSFKLQRNIGYFVFQTYL
Sbjct: 207 MYWKPTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYL 266
Query: 260 PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM 319
PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM
Sbjct: 267 PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM 326
Query: 320 CFVFVFAALLEYAAVNYSYWA 340
CFVFVFAALLEYAAVNY+YW
Sbjct: 327 CFVFVFAALLEYAAVNYTYWG 347
>gi|195131083|ref|XP_002009980.1| GI15665 [Drosophila mojavensis]
gi|193908430|gb|EDW07297.1| GI15665 [Drosophila mojavensis]
Length = 498
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/321 (84%), Positives = 293/321 (91%), Gaps = 13/321 (4%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C +K RL NVTQTIS++L GYDIRLRPNFGG+PL+VGMDLTIASFD+ISEV+MDYT
Sbjct: 28 CKRKEMLAGRLENVTQTISKILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYT 87
Query: 93 ITMYLNQYWKDDRLAFS-------------SEDEVLTLSGDFAEKIWVPDTFFANDKNSF 139
ITMYLNQYW+D+RLAF+ ++VLTLSGDFAEKIWVPDTFFANDKNSF
Sbjct: 88 ITMYLNQYWRDERLAFNIYGPYYDSDADDDGVNDVLTLSGDFAEKIWVPDTFFANDKNSF 147
Query: 140 LHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVV 199
LHDVTERNKLVRL GDG++TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTV DVV
Sbjct: 148 LHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVV 207
Query: 200 MYWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYL 259
MYWK TPVRGVE+A+LPQFTI+G+ETNDRKE+LATG YQRLSLSFKLQRNIGYFVFQTYL
Sbjct: 208 MYWKPTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYL 267
Query: 260 PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM 319
PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM
Sbjct: 268 PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM 327
Query: 320 CFVFVFAALLEYAAVNYSYWA 340
CFVFVFAALLEYAAVNY+YW
Sbjct: 328 CFVFVFAALLEYAAVNYTYWG 348
>gi|195479056|ref|XP_002100749.1| GE17238 [Drosophila yakuba]
gi|194188273|gb|EDX01857.1| GE17238 [Drosophila yakuba]
Length = 496
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 276/324 (85%), Positives = 295/324 (91%), Gaps = 12/324 (3%)
Query: 29 KLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVS 88
+L C +K RL NVTQTIS +L GYDIRLRPNFGG+PL+VGMDLTIASFD+ISEV+
Sbjct: 23 QLIRCIRKDVLAGRLENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVN 82
Query: 89 MDYTITMYLNQYWKDDRLAFSS-----EDE-------VLTLSGDFAEKIWVPDTFFANDK 136
MDYTITMYLNQYW+D+RLAF+ EDE VLTLSGDFAEKIWVPDTFFANDK
Sbjct: 83 MDYTITMYLNQYWRDERLAFNIFGQYFEDENDDGISDVLTLSGDFAEKIWVPDTFFANDK 142
Query: 137 NSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVL 196
NSFLHDVTERNKLVRL GDG++TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTV
Sbjct: 143 NSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVS 202
Query: 197 DVVMYWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQ 256
DVVMYWK TPVRGVE+A+LPQFTI+G+ETNDRKE+LATG YQRLSLSFKLQRNIGYFVFQ
Sbjct: 203 DVVMYWKPTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQ 262
Query: 257 TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY 316
TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY
Sbjct: 263 TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY 322
Query: 317 LVMCFVFVFAALLEYAAVNYSYWA 340
LVMCFVFVFAALLEYAAVNY+YW
Sbjct: 323 LVMCFVFVFAALLEYAAVNYTYWG 346
>gi|195044266|ref|XP_001991787.1| GH11877 [Drosophila grimshawi]
gi|193901545|gb|EDW00412.1| GH11877 [Drosophila grimshawi]
Length = 497
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 274/321 (85%), Positives = 295/321 (91%), Gaps = 13/321 (4%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C +K RL NVTQTIS++L GYDIRLRPNFGG+PL+VGMDLTIASFD+ISEV+MDYT
Sbjct: 27 CKRKEMLAGRLENVTQTISKILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYT 86
Query: 93 ITMYLNQYWKDDRLAFS---------SEDE----VLTLSGDFAEKIWVPDTFFANDKNSF 139
ITMYLNQYW+D+RLAF+ +ED+ VLTLSGDFAEKIWVPDTFFANDKNSF
Sbjct: 87 ITMYLNQYWRDERLAFNIYGPYYDTDAEDDGVNDVLTLSGDFAEKIWVPDTFFANDKNSF 146
Query: 140 LHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVV 199
LHDVTERNKLVRL GDG++TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTV DVV
Sbjct: 147 LHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVV 206
Query: 200 MYWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYL 259
MYWK TPVRGVE+A+LPQFTI+G+ETNDRKE+LATG YQRLSLSFKLQRNIGYFVFQTYL
Sbjct: 207 MYWKPTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYL 266
Query: 260 PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM 319
PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM
Sbjct: 267 PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM 326
Query: 320 CFVFVFAALLEYAAVNYSYWA 340
CFVFVFAALLEYAAVNY+YW
Sbjct: 327 CFVFVFAALLEYAAVNYTYWG 347
>gi|347963038|ref|XP_311123.3| AGAP000038-PA [Anopheles gambiae str. PEST]
gi|333467389|gb|EAA06524.3| AGAP000038-PA [Anopheles gambiae str. PEST]
Length = 471
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/323 (84%), Positives = 293/323 (90%), Gaps = 21/323 (6%)
Query: 42 RLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYW 101
RL NVTQTIS++L GYDIRLRPNFGG+PL+VGMDLTIASFD+ISEV+MDYTITMYLNQYW
Sbjct: 5 RLENVTQTISRILEGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYW 64
Query: 102 KDDRLAFSS---------------------EDEVLTLSGDFAEKIWVPDTFFANDKNSFL 140
KD+RLAF++ ++V+TLSGDFAEKIWVPDTFFANDKNSFL
Sbjct: 65 KDERLAFNAFALWGDNQKDQTGEIMIEDDGANDVITLSGDFAEKIWVPDTFFANDKNSFL 124
Query: 141 HDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVM 200
HDVTERNKLVRL GDG++TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTV DVVM
Sbjct: 125 HDVTERNKLVRLAGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVM 184
Query: 201 YWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
YW+ TP+RGVEEA+LPQFTI+G+ETNDRKEKLATG YQRLSLSFKLQRNIGYFVFQTYLP
Sbjct: 185 YWRSTPIRGVEEAELPQFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLP 244
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC
Sbjct: 245 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 304
Query: 321 FVFVFAALLEYAAVNYSYWADRA 343
FVFVFAALLEYAAVNY+YW RA
Sbjct: 305 FVFVFAALLEYAAVNYTYWGARA 327
>gi|195392956|ref|XP_002055120.1| GJ19199 [Drosophila virilis]
gi|194149630|gb|EDW65321.1| GJ19199 [Drosophila virilis]
Length = 497
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 272/321 (84%), Positives = 293/321 (91%), Gaps = 13/321 (4%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C +K RL NVTQTIS++L GYDIRLRPNFGG+PL+VGMDLTIASFD+ISEV+MDYT
Sbjct: 27 CKRKEMLAGRLENVTQTISKILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYT 86
Query: 93 ITMYLNQYWKDDRLAFS-------------SEDEVLTLSGDFAEKIWVPDTFFANDKNSF 139
ITMYLNQYW+D+RLAF+ ++VLTLSGDFAEKIWVPDTFFANDKNSF
Sbjct: 87 ITMYLNQYWRDERLAFNIYGPYYDSDADDDGVNDVLTLSGDFAEKIWVPDTFFANDKNSF 146
Query: 140 LHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVV 199
LHDVTERNKLVRL GDG++TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTV DVV
Sbjct: 147 LHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVV 206
Query: 200 MYWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYL 259
MYWK TPVRGVE+A+LPQFTI+G+ETNDRKE+LATG YQRLSLSFKLQRNIGYFVFQTYL
Sbjct: 207 MYWKPTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYL 266
Query: 260 PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM 319
PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM
Sbjct: 267 PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM 326
Query: 320 CFVFVFAALLEYAAVNYSYWA 340
CFVFVFAALLEYAAVNY+YW
Sbjct: 327 CFVFVFAALLEYAAVNYTYWG 347
>gi|45555535|ref|NP_996469.1| Ligand-gated chloride channel homolog 3 [Drosophila melanogaster]
gi|14286135|sp|Q08832.2|GBRB3_DROME RecName: Full=Gamma-aminobutyric acid receptor subunit beta-like;
AltName: Full=GABA(A) receptor; Flags: Precursor
gi|16767980|gb|AAL28208.1| GH08705p [Drosophila melanogaster]
gi|45446997|gb|AAS65370.1| Ligand-gated chloride channel homolog 3 [Drosophila melanogaster]
gi|220956304|gb|ACL90695.1| Lcch3-PA [synthetic construct]
Length = 496
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 275/324 (84%), Positives = 295/324 (91%), Gaps = 12/324 (3%)
Query: 29 KLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVS 88
+L C +K RL NVTQTIS +L GYDIRLRPNFGG+PL+VGMDLTIASFD+ISEV+
Sbjct: 23 QLIRCIRKDVLAGRLENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVN 82
Query: 89 MDYTITMYLNQYWKDDRLAFSS-----EDE-------VLTLSGDFAEKIWVPDTFFANDK 136
MDYTITMYLNQYW+D+RLAF+ +DE VLTLSGDFAEKIWVPDTFFANDK
Sbjct: 83 MDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDK 142
Query: 137 NSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVL 196
NSFLHDVTERNKLVRL GDG++TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTV
Sbjct: 143 NSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVS 202
Query: 197 DVVMYWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQ 256
DVVMYWK TPVRGVE+A+LPQFTI+G+ETNDRKE+LATG YQRLSLSFKLQRNIGYFVFQ
Sbjct: 203 DVVMYWKPTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQ 262
Query: 257 TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY 316
TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY
Sbjct: 263 TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY 322
Query: 317 LVMCFVFVFAALLEYAAVNYSYWA 340
LVMCFVFVFAALLEYAAVNY+YW
Sbjct: 323 LVMCFVFVFAALLEYAAVNYTYWG 346
>gi|194894090|ref|XP_001978006.1| GG17931 [Drosophila erecta]
gi|195555119|ref|XP_002077031.1| GD24824 [Drosophila simulans]
gi|304726|gb|AAA28559.1| GABA receptor beta subunit [Drosophila melanogaster]
gi|386138|gb|AAB27090.1| putative gamma-aminobutyric acid receptor beta subunit [Drosophila
melanogaster]
gi|190649655|gb|EDV46933.1| GG17931 [Drosophila erecta]
gi|194203049|gb|EDX16625.1| GD24824 [Drosophila simulans]
Length = 496
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 275/324 (84%), Positives = 295/324 (91%), Gaps = 12/324 (3%)
Query: 29 KLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVS 88
+L C +K RL NVTQTIS +L GYDIRLRPNFGG+PL+VGMDLTIASFD+ISEV+
Sbjct: 23 QLIRCIRKDVLAGRLENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVN 82
Query: 89 MDYTITMYLNQYWKDDRLAFSS-----EDE-------VLTLSGDFAEKIWVPDTFFANDK 136
MDYTITMYLNQYW+D+RLAF+ +DE VLTLSGDFAEKIWVPDTFFANDK
Sbjct: 83 MDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDK 142
Query: 137 NSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVL 196
NSFLHDVTERNKLVRL GDG++TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTV
Sbjct: 143 NSFLHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVS 202
Query: 197 DVVMYWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQ 256
DVVMYWK TPVRGVE+A+LPQFTI+G+ETNDRKE+LATG YQRLSLSFKLQRNIGYFVFQ
Sbjct: 203 DVVMYWKPTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQ 262
Query: 257 TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY 316
TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY
Sbjct: 263 TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY 322
Query: 317 LVMCFVFVFAALLEYAAVNYSYWA 340
LVMCFVFVFAALLEYAAVNY+YW
Sbjct: 323 LVMCFVFVFAALLEYAAVNYTYWG 346
>gi|242021134|ref|XP_002431001.1| Gaba-gated chloride channel, putative [Pediculus humanus corporis]
gi|212516225|gb|EEB18263.1| Gaba-gated chloride channel, putative [Pediculus humanus corporis]
Length = 467
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 269/304 (88%), Positives = 289/304 (95%), Gaps = 1/304 (0%)
Query: 41 ERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQY 100
+RL NV+Q IS+LL GYDIRLRPNFGGDPLYVGMD+TIASFDSISEV+MDYTITMYL+QY
Sbjct: 16 DRLENVSQIISKLLQGYDIRLRPNFGGDPLYVGMDMTIASFDSISEVNMDYTITMYLDQY 75
Query: 101 WKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSF-LHDVTERNKLVRLNGDGSIT 159
WKD+RLAFS++DE LTL+GDFAEKIWVPDTFFANDKN + + + NKLVRLNGDGSIT
Sbjct: 76 WKDERLAFSTDDETLTLAGDFAEKIWVPDTFFANDKNRYGFRFLVKPNKLVRLNGDGSIT 135
Query: 160 YGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQLPQFT 219
YGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTVLDVVMYWK+TPVRGVE+AQLPQFT
Sbjct: 136 YGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKDTPVRGVEKAQLPQFT 195
Query: 220 ILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT 279
I+G+ETNDRKE LATG YQRLSLSFKLQRNIGYF+FQTYLPSILIVMLSWVSFWINHEAT
Sbjct: 196 IIGYETNDRKESLATGIYQRLSLSFKLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEAT 255
Query: 280 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY+YW
Sbjct: 256 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYW 315
Query: 340 ADRA 343
RA
Sbjct: 316 GARA 319
>gi|55829087|gb|AAV66543.1| beta subunit-GABA-A-gated chloride channel [Anopheles gambiae]
Length = 459
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 265/315 (84%), Positives = 286/315 (90%), Gaps = 21/315 (6%)
Query: 50 ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
IS++L GYDIRLRPNFGG+PL+VGMDLTIASFD+ISEV+MDYTITMYLNQYWKD+RLAF+
Sbjct: 1 ISRILEGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFN 60
Query: 110 S---------------------EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNK 148
+ ++V+TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNK
Sbjct: 61 AFALWGDNQKDQTGEIMIEDDGANDVITLSGDFAEKIWVPDTFFANDKNSFLHDVTERNK 120
Query: 149 LVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR 208
LVRL GDG++TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTV DVVMYW+ TP+R
Sbjct: 121 LVRLAGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWRSTPIR 180
Query: 209 GVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLS 268
GVEEA+LPQFTI+G+ETNDRKEKLATG YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLS
Sbjct: 181 GVEEAELPQFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLS 240
Query: 269 WVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAAL 328
WVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAAL
Sbjct: 241 WVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAAL 300
Query: 329 LEYAAVNYSYWADRA 343
LEYAAVNY+YW RA
Sbjct: 301 LEYAAVNYTYWGARA 315
>gi|380023904|ref|XP_003695749.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like [Apis
florea]
Length = 460
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 266/303 (87%), Positives = 285/303 (94%), Gaps = 2/303 (0%)
Query: 41 ERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQY 100
E++A+ T+ L+ I + +F G+PL VGMDLTIASFD+ISEV+MDYTITMYLNQY
Sbjct: 5 EKVADYTEIQINPLNKKLINI--SFPGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQY 62
Query: 101 WKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITY 160
WKD+RLAFS E+EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL+GDGS+TY
Sbjct: 63 WKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTY 122
Query: 161 GMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQLPQFTI 220
GMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTVLDVVMYWKETPVRGVEEA+LPQFTI
Sbjct: 123 GMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAELPQFTI 182
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G+ETNDRKEKLATG YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS
Sbjct: 183 IGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 242
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY+YW
Sbjct: 243 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTYWG 302
Query: 341 DRA 343
RA
Sbjct: 303 ARA 305
>gi|321478374|gb|EFX89331.1| hypothetical protein DAPPUDRAFT_310319 [Daphnia pulex]
Length = 540
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 259/315 (82%), Positives = 290/315 (92%), Gaps = 2/315 (0%)
Query: 31 RLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMD 90
R+ + S++ RL NVT + QLL YDIRLRP+FGGDPLYVGMD+T+ASFD+ISEV+MD
Sbjct: 17 RIGGEVSSSRTRLKNVTNVLGQLLDDYDIRLRPDFGGDPLYVGMDITVASFDAISEVNMD 76
Query: 91 YTITMYLNQYWKDDRLAFSSEDE--VLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNK 148
YT+T+ LNQYW+D+RLAF+ E E VLTLSGDF+ KIWVPDTFFANDKNSFLHDVTERN
Sbjct: 77 YTLTLCLNQYWRDERLAFTHEKEDVVLTLSGDFSNKIWVPDTFFANDKNSFLHDVTERNT 136
Query: 149 LVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR 208
L+RL+GDGSI YG+RFTTTLACMMDLHYYPLD+QNCTVEIESYGYTV DVVM+W+ETPV
Sbjct: 137 LMRLHGDGSIEYGLRFTTTLACMMDLHYYPLDHQNCTVEIESYGYTVSDVVMFWRETPVV 196
Query: 209 GVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLS 268
GVE+A+LPQFTI+G+ETNDR EKLATG YQRLSLSF+LQRNIGYF+FQTYLPSILIVMLS
Sbjct: 197 GVEDAELPQFTIVGYETNDRMEKLATGAYQRLSLSFRLQRNIGYFIFQTYLPSILIVMLS 256
Query: 269 WVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAAL 328
WVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID+YLVMCFVFVFAAL
Sbjct: 257 WVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDVYLVMCFVFVFAAL 316
Query: 329 LEYAAVNYSYWADRA 343
LEYAAVNY++W RA
Sbjct: 317 LEYAAVNYTFWGARA 331
>gi|391346291|ref|XP_003747411.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
[Metaseiulus occidentalis]
Length = 499
Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust.
Identities = 254/304 (83%), Positives = 278/304 (91%), Gaps = 4/304 (1%)
Query: 41 ERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQY 100
E+L N+T + +L+GYDIRLRPNFGG PLY+GMDL IASFDSISEV+MDYTIT+YLNQY
Sbjct: 41 EQLENITDILKNILNGYDIRLRPNFGGKPLYIGMDLLIASFDSISEVNMDYTITLYLNQY 100
Query: 101 WKDDRLAFSSEDE---VLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGS 157
W D+RLAFSS ++ LTLSGDFAEKIWVPDTFFANDKNSFLHDVTE+NK+VRL DG
Sbjct: 101 WVDERLAFSSSEQNSQELTLSGDFAEKIWVPDTFFANDKNSFLHDVTEKNKMVRLKSDGH 160
Query: 158 ITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TPVRGVEEAQLP 216
ITYGMRFTTTLACMMDLHYYPLD QNCTVEIESYGYTV +VVMYWK+ PV GV+ ++LP
Sbjct: 161 ITYGMRFTTTLACMMDLHYYPLDAQNCTVEIESYGYTVDEVVMYWKQPNPVGGVDSSELP 220
Query: 217 QFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 276
QF+I+ HET DRKE LATGTYQRLSLSF+L+RNIGYF+FQTYLPSILIVMLSWVSFWINH
Sbjct: 221 QFSIVRHETTDRKESLATGTYQRLSLSFELKRNIGYFIFQTYLPSILIVMLSWVSFWINH 280
Query: 277 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY
Sbjct: 281 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 340
Query: 337 SYWA 340
+YW
Sbjct: 341 TYWG 344
>gi|170058496|ref|XP_001864947.1| gamma-aminobutyric-acid receptor a beta subunit 1, 2, 3 [Culex
quinquefasciatus]
gi|167877579|gb|EDS40962.1| gamma-aminobutyric-acid receptor a beta subunit 1, 2, 3 [Culex
quinquefasciatus]
Length = 466
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 259/311 (83%), Positives = 278/311 (89%), Gaps = 11/311 (3%)
Query: 42 RLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYW 101
RL NVTQTIS++L GYDIRLRPNFGGDPL VGMDLTIASFD+ISEV+MDYTITMYLNQYW
Sbjct: 5 RLENVTQTISRILEGYDIRLRPNFGGDPLTVGMDLTIASFDAISEVNMDYTITMYLNQYW 64
Query: 102 KDDRLAFSSED---------EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
KD+RL + D +V+TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL
Sbjct: 65 KDERLYDQNGDIMIDDDGANDVITLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 124
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEE 212
GDG++TYGMRFTTTLACMMDLHYYPLD+QNCTVEIES + + MY+ T +EE
Sbjct: 125 AGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESCEFGIF--CMYYCSTNTNYLEE 182
Query: 213 AQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSF 272
A+LPQFTI+G+ETNDRKEKLATG YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSF
Sbjct: 183 AELPQFTIIGYETNDRKEKLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSF 242
Query: 273 WINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 332
WINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA
Sbjct: 243 WINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 302
Query: 333 AVNYSYWADRA 343
AVNY+YW RA
Sbjct: 303 AVNYTYWGARA 313
>gi|306448445|gb|ADM88005.1| ligand-gated chloride channel-like3 protein [Bombyx mori]
Length = 409
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 244/270 (90%), Positives = 257/270 (95%)
Query: 81 FDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFL 140
FD+ISEV+MDYTIT+YLNQYWKD+RLAF +EVLTLSGDFA+KIWVPDTFFANDKNSFL
Sbjct: 1 FDAISEVNMDYTITLYLNQYWKDERLAFGLPEEVLTLSGDFADKIWVPDTFFANDKNSFL 60
Query: 141 HDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVM 200
HDVTERNKLVRL GDGSITYGMRFT TLACMMDLHYYPLD+QNCTVEIESYGYT DVVM
Sbjct: 61 HDVTERNKLVRLGGDGSITYGMRFTATLACMMDLHYYPLDSQNCTVEIESYGYTASDVVM 120
Query: 201 YWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
YWK TPVRGVE+A+LPQFTILGHETNDRKEKLATG YQRLSLSFKL+RNIGYFVFQTYLP
Sbjct: 121 YWKNTPVRGVEDAELPQFTILGHETNDRKEKLATGVYQRLSLSFKLRRNIGYFVFQTYLP 180
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC
Sbjct: 181 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 240
Query: 321 FVFVFAALLEYAAVNYSYWADRAKKKPKAK 350
FVFVFAALLEYAAVNY+YW RA+K+ K K
Sbjct: 241 FVFVFAALLEYAAVNYTYWGARARKRAKLK 270
>gi|443703781|gb|ELU01183.1| hypothetical protein CAPTEDRAFT_144043 [Capitella teleta]
Length = 495
Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust.
Identities = 245/310 (79%), Positives = 273/310 (88%), Gaps = 4/310 (1%)
Query: 43 LANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWK 102
L NV++TI+ LL YDIRLRP FGG+ L + M L +ASFDSISEV+MDYTIT+YLNQYWK
Sbjct: 38 LQNVSRTIANLLEKYDIRLRPQFGGEALIIEMKLLLASFDSISEVNMDYTITIYLNQYWK 97
Query: 103 DDRLAFSSE-DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYG 161
D+RLAFS DE +TL+GDFAEKIWVPDTFFANDK+SFLHDVTE+NK+VRL+GDGS+ YG
Sbjct: 98 DERLAFSDNYDETMTLTGDFAEKIWVPDTFFANDKHSFLHDVTEKNKMVRLHGDGSLVYG 157
Query: 162 MRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK---ETPVRGVEEAQLPQF 218
MRFTTTLACMMDLHYYPLD QNCTVEIESYGY + DVVM WK E V GV + ++PQF
Sbjct: 158 MRFTTTLACMMDLHYYPLDVQNCTVEIESYGYPMQDVVMKWKGGGEDAVDGVAKVEIPQF 217
Query: 219 TILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEA 278
TI+ + EKLATG+YQRLSLSFK++RNIGYF+FQTYLPSILIVMLSWVSFWINHEA
Sbjct: 218 TIVDYRCISTVEKLATGSYQRLSLSFKMERNIGYFIFQTYLPSILIVMLSWVSFWINHEA 277
Query: 279 TSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSY 338
TSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY+Y
Sbjct: 278 TSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYTY 337
Query: 339 WADRAKKKPK 348
W RAK+K K
Sbjct: 338 WGARAKRKAK 347
>gi|307189537|gb|EFN73914.1| Gamma-aminobutyric acid receptor subunit beta-like [Camponotus
floridanus]
Length = 404
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/249 (93%), Positives = 243/249 (97%)
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MYLNQYWKD+RLAFS E EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL+RL+G
Sbjct: 1 MYLNQYWKDERLAFSHEGEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLIRLSG 60
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ 214
DGS+TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTVLDVVMYWKETPVRGV+EA+
Sbjct: 61 DGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWKETPVRGVKEAE 120
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
LPQFTI+G+ETNDRKE LATG YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI
Sbjct: 121 LPQFTIIGYETNDRKETLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 180
Query: 275 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV
Sbjct: 181 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 240
Query: 335 NYSYWADRA 343
NY+YW RA
Sbjct: 241 NYTYWGARA 249
>gi|120781|sp|P26714.1|GBRB_LYMST RecName: Full=Gamma-aminobutyric acid receptor subunit beta;
AltName: Full=GABA(A) receptor; Flags: Precursor
gi|9627|emb|CAA41495.1| GABA-A receptor beta subunit [Lymnaea stagnalis]
Length = 499
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/321 (73%), Positives = 269/321 (83%), Gaps = 12/321 (3%)
Query: 40 TERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQ 99
T+ ANVT TI LL GYDIRLRP+FGG PL +G+++ +ASFDSISEV MDYTITMYLNQ
Sbjct: 27 TDHFANVTNTIDSLLKGYDIRLRPSFGGAPLEIGIEVILASFDSISEVDMDYTITMYLNQ 86
Query: 100 YWKDDRLAFSSEDEV----------LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
YW+D+RL F + + +TL+G FAEKIWVPDTF ANDKNSFLHD+TE+NK+
Sbjct: 87 YWRDERLQFIFNESLDLGENRSVTTMTLTGAFAEKIWVPDTFLANDKNSFLHDITEKNKM 146
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPV 207
VRL G+GS+ YGMRFTTTLACMMDLH YPLD+Q CTVEIESYGYT+ D+V+YW V
Sbjct: 147 VRLYGNGSLVYGMRFTTTLACMMDLHNYPLDHQECTVEIESYGYTMDDIVLYWLNDRGAV 206
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GVE+ LPQF+I + T ++ E+L+TG YQRLSL F+LQRNIGYF+FQTYLPSILIVML
Sbjct: 207 TGVEDVSLPQFSITNYATINKIEELSTGDYQRLSLIFQLQRNIGYFIFQTYLPSILIVML 266
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWINHEATSARVALGITTVLTMTTIS GVRSSLPRISYVKAIDIYLVMCFVFVFAA
Sbjct: 267 SWVSFWINHEATSARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLVMCFVFVFAA 326
Query: 328 LLEYAAVNYSYWADRAKKKPK 348
LLEYAAVNY+YW RAK+K K
Sbjct: 327 LLEYAAVNYTYWGARAKRKAK 347
>gi|9795254|gb|AAF97816.1| GABA-A receptor beta subunit [Sepia officinalis]
Length = 486
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/301 (78%), Positives = 261/301 (86%), Gaps = 3/301 (0%)
Query: 42 RLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYW 101
R N T TI +LL GYDIRLRP F L +GM++ IASFDSISEV+MDYTITMYLNQYW
Sbjct: 33 RFQNTTDTIERLLKGYDIRLRPQFEVQALRIGMEIIIASFDSISEVNMDYTITMYLNQYW 92
Query: 102 KDDRLAFSSE-DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITY 160
D+RL +S++ D+ LTL+GDFAEKIWVPDTFFANDKNSFLHD+TE+NK++RL G+GSI Y
Sbjct: 93 TDERLVYSNDSDDNLTLTGDFAEKIWVPDTFFANDKNSFLHDITEKNKMIRLFGNGSIVY 152
Query: 161 GMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQF 218
GMRFTTTLACMMDLHYYPLD QNCTVE+ESYGYT+ DV+MYW+ + V GVE +LPQF
Sbjct: 153 GMRFTTTLACMMDLHYYPLDEQNCTVEVESYGYTMFDVIMYWRNGKNAVMGVENVELPQF 212
Query: 219 TILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEA 278
I ++T EKL T YQRLSLSFKLQRNIGYF+FQTYLPSILIVMLSWVSFWINHEA
Sbjct: 213 HIKEYKTVVTIEKLMTPNYQRLSLSFKLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEA 272
Query: 279 TSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSY 338
TSARVALGITTVLTMTTIS GVRSSLPRISYVKAIDIYLV+CFVFVFAALLEYAAVNY Y
Sbjct: 273 TSARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLVVCFVFVFAALLEYAAVNYKY 332
Query: 339 W 339
W
Sbjct: 333 W 333
>gi|195355481|ref|XP_002044220.1| GM22599 [Drosophila sechellia]
gi|194129509|gb|EDW51552.1| GM22599 [Drosophila sechellia]
Length = 466
Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust.
Identities = 242/324 (74%), Positives = 262/324 (80%), Gaps = 42/324 (12%)
Query: 29 KLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVS 88
+L C +K RL NVTQTIS +L GYDIRLRPNFGG+PL+VGMDLTIASFD+ISEV+
Sbjct: 23 QLIRCIRKDVLAGRLENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVN 82
Query: 89 MDYTITMYLNQYWKDDRLAFSS-----EDE-------VLTLSGDFAEKIWVPDTFFANDK 136
MDYTITMYLNQYW+D+RLAF+ +DE VLTLSGDFAEKIWVPDTFFANDK
Sbjct: 83 MDYTITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDK 142
Query: 137 NSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVL 196
NSFLHDVTE+NKLVRL GDG++ GYTV
Sbjct: 143 NSFLHDVTEKNKLVRLGGDGAVX------------------------------XXGYTVS 172
Query: 197 DVVMYWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQ 256
DVVMYWK TPVRGVE+A+LPQFTI+G+ETNDRKE+LATG YQRLSLSFKLQRNIGYFVFQ
Sbjct: 173 DVVMYWKPTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQ 232
Query: 257 TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY 316
TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY
Sbjct: 233 TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY 292
Query: 317 LVMCFVFVFAALLEYAAVNYSYWA 340
LVMCFVFVFAALLEYAAVNY+YW
Sbjct: 293 LVMCFVFVFAALLEYAAVNYTYWG 316
>gi|218741191|dbj|BAH03471.1| gamma-aminobutyric acid receptor beta subunit [Lehmannia
valentiana]
Length = 504
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/319 (72%), Positives = 264/319 (82%), Gaps = 12/319 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + A E NVT+TI LL GYDIRLRP+FGG PL +G+++ +ASFDSISEV+MDY
Sbjct: 32 VCRGQQA--EHFRNVTETIDNLLKGYDIRLRPSFGGAPLEIGIEVILASFDSISEVNMDY 89
Query: 92 TITMYLNQYWKDDRLAFSSED--------EVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
TITMYL QYW+D+RL F E + +TL+G FAEKIWVPDTF ANDKNSFLHDV
Sbjct: 90 TITMYLKQYWRDERLQFLHESSDNDQDAIKTMTLTGAFAEKIWVPDTFLANDKNSFLHDV 149
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW- 202
TE+NK+VRL G+GS+ YGMR TTTLACMMDLH YPLD+Q CTVEIESYGYT+ D+V+YW
Sbjct: 150 TEKNKMVRLYGNGSLVYGMRSTTTLACMMDLHNYPLDHQECTVEIESYGYTMDDIVLYWL 209
Query: 203 -KETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
V GVE+ LPQF+I + T ++ E+L TG YQRLSL F+LQR+IGYF+FQTYLPS
Sbjct: 210 SDRDAVTGVEDVSLPQFSISNYATINKIEELLTGDYQRLSLIFQLQRSIGYFIFQTYLPS 269
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
ILIVMLSWVSFWINHEA+SARVALGITTVLTMTTIS GVRSSLPRISYVKAIDIYLVMCF
Sbjct: 270 ILIVMLSWVSFWINHEASSARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLVMCF 329
Query: 322 VFVFAALLEYAAVNYSYWA 340
VFVFAALLEYAAVNY+YW
Sbjct: 330 VFVFAALLEYAAVNYTYWG 348
>gi|241680536|ref|XP_002411566.1| Gaba-gated chloride channel, putative [Ixodes scapularis]
gi|215504301|gb|EEC13795.1| Gaba-gated chloride channel, putative [Ixodes scapularis]
Length = 405
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/256 (86%), Positives = 240/256 (93%), Gaps = 1/256 (0%)
Query: 89 MDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNK 148
MDYTIT+YLNQYW+D+RL FS E LTLSGDFAEKIWVPDTFFANDKNSFLHDVTE+NK
Sbjct: 1 MDYTITLYLNQYWRDERLTFSKEKYELTLSGDFAEKIWVPDTFFANDKNSFLHDVTEKNK 60
Query: 149 LVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PV 207
+VRL DG ITYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTV DVVM+WK+ PV
Sbjct: 61 MVRLQSDGHITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMFWKDPEPV 120
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GVE+++LPQF+I+ +ET DRKEKLATGTYQRLSLSF+L+RNIGYF+FQTYLPSILIVML
Sbjct: 121 VGVEQSELPQFSIMRYETTDRKEKLATGTYQRLSLSFELKRNIGYFIFQTYLPSILIVML 180
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA
Sbjct: 181 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 240
Query: 328 LLEYAAVNYSYWADRA 343
LLEYAAVNY+YW RA
Sbjct: 241 LLEYAAVNYTYWGARA 256
>gi|38491407|gb|AAR21858.1| GABA-beta subunit [Cooperia oncophora]
Length = 543
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 212/312 (67%), Positives = 257/312 (82%), Gaps = 3/312 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+N + ++ LL YDIRLRP FGGD L + MD+ IASFDSISEV+MDYTITMYL+QYW D
Sbjct: 59 SNASSLLADLLADYDIRLRPGFGGDALLLTMDIIIASFDSISEVNMDYTITMYLHQYWTD 118
Query: 104 DRLAFSSEDEV--LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYG 161
+RL++ + +TLSG+F++ IWVPDTF ANDK+SFLH+VTERNK++R++ DG I YG
Sbjct: 119 ERLSWGGSVPIDEMTLSGEFSQNIWVPDTFLANDKHSFLHEVTERNKMLRISVDGKIAYG 178
Query: 162 MRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI 220
MR T+TL+C M+L +PLD+QNCTVEIESYGYT +V+M W + V GVE+ +PQFTI
Sbjct: 179 MRLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMLWNRPKAVHGVEDVDVPQFTI 238
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
G++T DR ATG+YQRLSL F+LQR++GYF+FQTYLP +LIVMLSWVSFWINHEATS
Sbjct: 239 TGYQTEDRVVSTATGSYQRLSLVFQLQRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATS 298
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
ARVALGITTVLTMTTISTGVR SLPRISYVK+ID+YLVMCFVFVFAALLEYAAVNYSYW
Sbjct: 299 ARVALGITTVLTMTTISTGVRQSLPRISYVKSIDVYLVMCFVFVFAALLEYAAVNYSYWG 358
Query: 341 DRAKKKPKAKEP 352
R++ + P
Sbjct: 359 RRSRGGGEEGWP 370
>gi|124518434|gb|ABN13868.1| GABA-A receptor [Haliotis asinina]
Length = 485
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 222/326 (68%), Positives = 245/326 (75%), Gaps = 12/326 (3%)
Query: 35 KKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTIT 94
+ T N T TI LL GYDIRLRP+ GG +GM++ +ASFDSISEV MD TIT
Sbjct: 19 RSQGDTSHFPNTTDTIDGLLKGYDIRLRPSSGGTHFEIGMEVILASFDSISEVVMDNTIT 78
Query: 95 MYLNQYWKDDRLAF----------SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
MYLNQYW D+RL F + +TL+ DFAEKIWVPDTFFAN+KNSFL D+T
Sbjct: 79 MYLNQYWPDERLQFIFLESLDLIENRSATTMTLTTDFAEKIWVPDTFFANNKNSFLQDIT 138
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW-- 202
E+ K VRL G+GS+ YGMRFTTTLACMMDLHY PLD QNCTVEIESYGY + D V Y
Sbjct: 139 EKYKRVRLYGNGSLVYGMRFTTTLACMMDLHYLPLDQQNCTVEIESYGYPMFDKVTYCLN 198
Query: 203 KETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSI 262
V VE LPQF I + + +EKL T YQRLSL F LQRNIGYF+FQTYLPSI
Sbjct: 199 NRGAVTPVEVVDLPQFHITDYTPINTREKLITRDYQRLSLIFTLQRNIGYFIFQTYLPSI 258
Query: 263 LIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 322
LIVM SWV FWINHEATSARVALGITTVLTMTTI+ GVRSSLPRISYVKAIDIYLVMCFV
Sbjct: 259 LIVMFSWVCFWINHEATSARVALGITTVLTMTTINNGVRSSLPRISYVKAIDIYLVMCFV 318
Query: 323 FVFAALLEYAAVNYSYWADRAKKKPK 348
FV AALLEYAAVNY+YW RAK+K K
Sbjct: 319 FVLAALLEYAAVNYTYWGARAKRKAK 344
>gi|268570843|ref|XP_002640852.1| C. briggsae CBR-GAB-1 protein [Caenorhabditis briggsae]
Length = 501
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/286 (72%), Positives = 243/286 (84%), Gaps = 3/286 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-- 114
YDIRLRP FGGD L + MD+ IASFDSISEV MDYT+TMYL+QYW D+RL +S+E +
Sbjct: 27 YDIRLRPGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDE 86
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
+TLSG+F++ IWVPDTF ANDK+S+LH+VTERNK++R+N DG + YGMR T+TL+C M+L
Sbjct: 87 MTLSGEFSQNIWVPDTFLANDKHSYLHEVTERNKMLRVNVDGKVAYGMRLTSTLSCSMNL 146
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
+PLD+QNCTVEIESYGYT +V+M W V GVE+A +PQFTI G T D A
Sbjct: 147 RNFPLDSQNCTVEIESYGYTTSEVLMKWNYPLAVHGVEQADVPQFTITGFHTEDSIVSTA 206
Query: 234 TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTM 293
TG+YQRLSL F+L+R++GYF+FQTYLP +LIVMLSWVSFWINHEATSARVALGITTVLTM
Sbjct: 207 TGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGITTVLTM 266
Query: 294 TTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
TTISTGVR SLPRISYVK+IDIYLVMCFVFVFAALLEYAAVNYSYW
Sbjct: 267 TTISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNYSYW 312
>gi|341899108|gb|EGT55043.1| hypothetical protein CAEBREN_09119 [Caenorhabditis brenneri]
Length = 510
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/286 (72%), Positives = 243/286 (84%), Gaps = 3/286 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-- 114
YDIRLRP FGGD L + MD+ IASFDSISEV MDYT+TMYL+QYW D+RL +++E +
Sbjct: 16 YDIRLRPGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWNNEIPIDE 75
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
+TLSG+F++ IWVPDTF ANDK+S+LH+VTERNK++R+N DG + YGMR T+TL+C M+L
Sbjct: 76 MTLSGEFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNL 135
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
+PLD+QNCTVEIESYGYT +V+M W V GVE+A +PQFTI G T D A
Sbjct: 136 RNFPLDSQNCTVEIESYGYTTSEVLMKWNYPLAVHGVEQADVPQFTITGFHTEDSIVSTA 195
Query: 234 TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTM 293
TG+YQRLSL F+L+R++GYF+FQTYLP +LIVMLSWVSFWINHEATSARVALGITTVLTM
Sbjct: 196 TGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGITTVLTM 255
Query: 294 TTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
TTISTGVR SLPRISYVK+IDIYLVMCFVFVFAALLEYAAVNYSYW
Sbjct: 256 TTISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNYSYW 301
>gi|71996759|ref|NP_499661.2| Protein GAB-1 [Caenorhabditis elegans]
gi|74958176|sp|O18276.3|GBRB_CAEEL RecName: Full=Gamma-aminobutyric acid receptor subunit beta;
AltName: Full=GABA(A) receptor subunit beta; Flags:
Precursor
gi|29603354|emb|CAB07719.3| Protein GAB-1 [Caenorhabditis elegans]
Length = 550
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/284 (72%), Positives = 241/284 (84%), Gaps = 3/284 (1%)
Query: 59 IRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV--LT 116
IRLRP FGGD L + MD+ IASFDSISEV MDYT+TMYL+QYW D+RL +S+E + +T
Sbjct: 67 IRLRPGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDEMT 126
Query: 117 LSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHY 176
LSG+F++ IWVPDTF ANDK+S+LH+VTERNK++R+N DG + YGMR T+TL+C M+L
Sbjct: 127 LSGEFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRN 186
Query: 177 YPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDRKEKLATG 235
+PLD+QNCTVEIESYGYT +V+M W V GVE+A +PQFTI G T D ATG
Sbjct: 187 FPLDSQNCTVEIESYGYTTSEVLMKWNYPLAVHGVEQADVPQFTITGFHTEDSIVSTATG 246
Query: 236 TYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTT 295
+YQRLSL F+L+R++GYF+FQTYLP +LIVMLSWVSFWINHEATSARVALGITTVLTMTT
Sbjct: 247 SYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGITTVLTMTT 306
Query: 296 ISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
ISTGVR SLPRISYVK+IDIYLVMCFVFVFAALLEYAAVNYSYW
Sbjct: 307 ISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNYSYW 350
>gi|308498974|ref|XP_003111673.1| CRE-GAB-1 protein [Caenorhabditis remanei]
gi|308239582|gb|EFO83534.1| CRE-GAB-1 protein [Caenorhabditis remanei]
Length = 566
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/284 (72%), Positives = 241/284 (84%), Gaps = 3/284 (1%)
Query: 59 IRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV--LT 116
IRLRP FGGD L + MD+ IASFDSISEV MDYT+TMYL+QYW D+RL +S+E + +T
Sbjct: 67 IRLRPGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDEMT 126
Query: 117 LSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHY 176
LSG+F++ IWVPDTF ANDK+S+LH+VTERNK++R+N DG + YGMR T+TL+C M+L
Sbjct: 127 LSGEFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRN 186
Query: 177 YPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDRKEKLATG 235
+PLD+QNCTVEIESYGYT +V+M W V GVE+A +PQFTI G T D ATG
Sbjct: 187 FPLDSQNCTVEIESYGYTTSEVLMKWNYPLAVHGVEQADVPQFTITGFHTEDSIVSTATG 246
Query: 236 TYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTT 295
+YQRLSL F+L+R++GYF+FQTYLP +LIVMLSWVSFWINHEATSARVALGITTVLTMTT
Sbjct: 247 SYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSARVALGITTVLTMTT 306
Query: 296 ISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
ISTGVR SLPRISYVK+IDIYLVMCFVFVFAALLEYAAVNYSYW
Sbjct: 307 ISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNYSYW 350
>gi|405957409|gb|EKC23621.1| Gamma-aminobutyric acid receptor subunit beta [Crassostrea gigas]
Length = 748
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/298 (70%), Positives = 245/298 (82%), Gaps = 11/298 (3%)
Query: 47 TQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRL 106
+ I LL YDIRLRPNFG + VG++L +ASFD+ISEV+MDYTIT+YLNQYW D+RL
Sbjct: 315 SSVIDSLLSNYDIRLRPNFGDAAVDVGIELVVASFDTISEVNMDYTITIYLNQYWTDERL 374
Query: 107 AFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
+ +L+ GDFA+KIWVPDTFFANDKNSFLHDVTE+NK++RL+G+G F
Sbjct: 375 THGNLSTSTSLTLTGDFADKIWVPDTFFANDKNSFLHDVTEKNKMIRLHGNG-------F 427
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILG 222
TTTLACMMDLH YPLD QNCTVEIESYGY + D+ ++W+ V G+++ +LPQF+I+
Sbjct: 428 TTTLACMMDLHNYPLDEQNCTVEIESYGYDMADLYLHWRSGHHSVHGIQDIELPQFSIVE 487
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ T ++ E L TG Y RLSLSFKL RN+GYF+FQTYLPSILIVMLSWVSFWINHEATSAR
Sbjct: 488 YRTVEKIESLLTGKYPRLSLSFKLHRNVGYFIFQTYLPSILIVMLSWVSFWINHEATSAR 547
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
VALGITTVLTMTTIS GVRSSLPRISYVKAIDIYLV CFVFVFAALLEYAAVNY+YW
Sbjct: 548 VALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLVTCFVFVFAALLEYAAVNYTYWG 605
>gi|24943213|gb|AAN65376.1| GABA-A receptor subunit [Caenorhabditis elegans]
Length = 550
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/284 (71%), Positives = 239/284 (84%), Gaps = 3/284 (1%)
Query: 59 IRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV--LT 116
IRLRP FGGD L + MD+ IASFDSISEV MDYT+TMYL+QYW D+RL +S+E + +T
Sbjct: 67 IRLRPGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDEMT 126
Query: 117 LSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHY 176
LSG+F++ IWVPDTF ANDK+S+LH+VTERNK++R+N DG + YGMR T+TL+C M+L
Sbjct: 127 LSGEFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRN 186
Query: 177 YPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDRKEKLATG 235
+ LD+QNCTVEIESYGYT +V+M W V GVE+A +PQFTI G T D ATG
Sbjct: 187 FSLDSQNCTVEIESYGYTTSEVLMKWNYPLAVHGVEQADVPQFTITGFHTEDSIVSTATG 246
Query: 236 TYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTT 295
+YQRLSL F+L+R++GYF+F+TYLP LIVMLSWVSFWINHEATSARVALGITTVLTMTT
Sbjct: 247 SYQRLSLVFQLRRSVGYFIFETYLPCDLIVMLSWVSFWINHEATSARVALGITTVLTMTT 306
Query: 296 ISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
ISTGVR SLPRISYVK+IDIYLVMCFVFVFAALLEYAAVNYSYW
Sbjct: 307 ISTGVRQSLPRISYVKSIDIYLVMCFVFVFAALLEYAAVNYSYW 350
>gi|291224453|ref|XP_002732218.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, beta 3-like
[Saccoglossus kowalevskii]
Length = 1252
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/313 (61%), Positives = 239/313 (76%), Gaps = 3/313 (0%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+T TI +L YDIRLRPNFG P+ V MD+ I+S +SISEV+MDYT+TMY QYWKD+
Sbjct: 41 NITSTIDSILKTYDIRLRPNFGDSPVTVEMDMDISSMNSISEVNMDYTLTMYFRQYWKDE 100
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RLA+ ++ G A +IWVPDT+F NDK++F+HDVT N+++R + DGS+ YG+R
Sbjct: 101 RLAYDPRFGNISFDGRMANRIWVPDTYFVNDKHAFIHDVTVANRMIRFHYDGSVLYGLRI 160
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILG 222
TT L+CMMDLH YPLD QNCT+EIESYGYT DV W+ V+G+E+ QLPQF +
Sbjct: 161 TTVLSCMMDLHDYPLDVQNCTLEIESYGYTTEDVTYAWQYGNRSVQGLEDVQLPQFVLEE 220
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ R+ +TG+Y RLSL F+L+R++G+F+ QTYLP ILIVMLSWVSFWINHEATSAR
Sbjct: 221 YRLVKRQAAFSTGSYPRLSLEFRLRRSVGFFILQTYLPCILIVMLSWVSFWINHEATSAR 280
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADR 342
VALGITTVLTMTTIST VR+SLPRISY+KAIDIYLV F FVFAALLEYA VNY++W +
Sbjct: 281 VALGITTVLTMTTISTSVRASLPRISYIKAIDIYLVTSFAFVFAALLEYAIVNYNFWQSQ 340
Query: 343 AK-KKPKAKEPTP 354
K K + P P
Sbjct: 341 KKITKENNRAPPP 353
>gi|348519034|ref|XP_003447036.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oreochromis niloticus]
Length = 515
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/328 (57%), Positives = 250/328 (76%), Gaps = 2/328 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 16 VCAQSVSDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVGVGMNIDIASIDMVSEVNMDY 75
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 76 TLTMYFQQAWRDKRLSYSDIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 135
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 136 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTG 195
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V++ +LPQF+I+ H+ + +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 196 VDKIELPQFSIVDHKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 255
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 256 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 315
Query: 330 EYAAVNYSYWADRAKKKPKAKEPTPLGN 357
EYA VNY ++ +++ KA E T N
Sbjct: 316 EYALVNYIFFGRGPQRQKKAAEKTATAN 343
>gi|114656020|ref|XP_510254.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
6 [Pan troglodytes]
Length = 475
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 244/323 (75%), Gaps = 2/323 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 24 CAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 ERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPT 353
YA VNY ++ +++ K E T
Sbjct: 324 YAFVNYIFFGRGPQRQKKLAEKT 346
>gi|332843337|ref|XP_003314618.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Pan troglodytes]
Length = 473
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 244/323 (75%), Gaps = 2/323 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 24 CAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 ERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPT 353
YA VNY ++ +++ K E T
Sbjct: 324 YAFVNYIFFGRGPQRQKKLAEKT 346
>gi|426378392|ref|XP_004055911.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
6 [Gorilla gorilla gorilla]
Length = 475
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 244/323 (75%), Gaps = 2/323 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 24 CAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 ERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPT 353
YA VNY ++ +++ K E T
Sbjct: 324 YAFVNYIFFGRGPQRQKKLAEKT 346
>gi|386781493|ref|NP_001247631.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Macaca
mulatta]
gi|402873749|ref|XP_003900724.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Papio anubis]
gi|380811404|gb|AFE77577.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 1 precursor
[Macaca mulatta]
Length = 473
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 244/323 (75%), Gaps = 2/323 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 24 CAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 ERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPT 353
YA VNY ++ +++ K E T
Sbjct: 324 YAFVNYIFFGRGPQRQKKLAEKT 346
>gi|426378382|ref|XP_004055906.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Gorilla gorilla gorilla]
Length = 473
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 244/323 (75%), Gaps = 2/323 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 24 CAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 ERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPT 353
YA VNY ++ +++ K E T
Sbjct: 324 YAFVNYIFFGRGPQRQKKLAEKT 346
>gi|4503867|ref|NP_000805.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 1 precursor
[Homo sapiens]
gi|120773|sp|P28472.1|GBRB3_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|182925|gb|AAA52511.1| GABA-alpha receptor beta-3 subunit [Homo sapiens]
gi|60654677|gb|AAX31903.1| gamma-aminobutyric acid [synthetic construct]
gi|60654679|gb|AAX31904.1| gamma-aminobutyric acid [synthetic construct]
gi|123980366|gb|ABM82012.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
gi|261861478|dbj|BAI47261.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
Length = 473
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 244/323 (75%), Gaps = 2/323 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 24 CAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 ERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPT 353
YA VNY ++ +++ K E T
Sbjct: 324 YAFVNYIFFGRGPQRQKKLAEKT 346
>gi|6679911|ref|NP_032097.1| gamma-aminobutyric acid receptor subunit beta-3 isoform a precursor
[Mus musculus]
gi|52000955|sp|P63079.1|GBRB3_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|52000959|sp|P63080.1|GBRB3_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|755159|gb|AAB60502.1| GABA-benzodiazepine receptor beta-3 subunit [Mus musculus]
gi|26333025|dbj|BAC30230.1| unnamed protein product [Mus musculus]
gi|74181039|dbj|BAE27794.1| unnamed protein product [Mus musculus]
gi|149031467|gb|EDL86447.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_a [Rattus norvegicus]
gi|151555297|gb|AAI48599.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3
[synthetic construct]
gi|157169890|gb|AAI53160.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3
[synthetic construct]
gi|226316|prf||1506343B GABA A receptor beta
gi|1095220|prf||2108275C GABA-A receptor:SUBUNIT=beta3
Length = 473
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 244/323 (75%), Gaps = 2/323 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 24 CAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 ERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPT 353
YA VNY ++ +++ K E T
Sbjct: 324 YAFVNYIFFGRGPQRQKKLAEKT 346
>gi|395855528|ref|XP_003800208.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Otolemur garnettii]
Length = 473
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 244/323 (75%), Gaps = 2/323 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 24 CAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 ERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPT 353
YA VNY ++ +++ K E T
Sbjct: 324 YAFVNYIFFGRGPQRQKKLAEKT 346
>gi|149691051|ref|XP_001493098.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Equus caballus]
Length = 473
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 244/323 (75%), Gaps = 2/323 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 24 CAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 ERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPT 353
YA VNY ++ +++ K E T
Sbjct: 324 YAFVNYIFFGRGPQRQKKLAEKT 346
>gi|344298009|ref|XP_003420687.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Loxodonta africana]
Length = 474
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/322 (58%), Positives = 243/322 (75%), Gaps = 2/322 (0%)
Query: 34 HKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTI 93
H ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+
Sbjct: 26 HSGERIPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTL 85
Query: 94 TMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+
Sbjct: 86 TMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLH 145
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVE 211
DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE
Sbjct: 146 PDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVE 205
Query: 212 EAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVS 271
+LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVS
Sbjct: 206 RIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVS 265
Query: 272 FWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEY 331
FWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEY
Sbjct: 266 FWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEY 325
Query: 332 AAVNYSYWADRAKKKPKAKEPT 353
A VNY ++ +++ K E T
Sbjct: 326 AFVNYIFFGRGPQRQKKLAEKT 347
>gi|410915504|ref|XP_003971227.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Takifugu rubripes]
Length = 482
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/334 (56%), Positives = 251/334 (75%), Gaps = 4/334 (1%)
Query: 32 LCHKKSATTER--LANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
LC +S++T ++ T+ +LL GYDIRLRP+FGG P+ VGM + IAS DSISEV+M
Sbjct: 22 LCFAQSSSTGNSGMSVAKTTVDKLLKGYDIRLRPDFGGPPVIVGMSINIASIDSISEVNM 81
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITMY Q W+D RLA+ LTL A+++W+PDT+F NDK SFLH VT +N++
Sbjct: 82 DYTITMYFQQSWRDKRLAYGELKLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRM 141
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+V +W+ +T V
Sbjct: 142 IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDTAV 201
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GV++ +LPQF+I+G R+ + TG+Y RLSLSF+++RNIGYF+ QTY+PSILI +L
Sbjct: 202 TGVDKLELPQFSIVGIRLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILITIL 261
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVALG+TTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF A
Sbjct: 262 SWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLA 321
Query: 328 LLEYAAVNYSYWADRAKKKPKAKEPTPLGNYIRL 361
LLEYA VNY ++ ++ K E N R+
Sbjct: 322 LLEYAFVNYVFFGRGPAQQKKLSERVGKSNNERM 355
>gi|148689912|gb|EDL21859.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_a [Mus musculus]
Length = 472
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/323 (58%), Positives = 244/323 (75%), Gaps = 2/323 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 23 CAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYT 82
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 83 LTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 142
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 143 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGV 202
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 203 ERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWV 262
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 263 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 322
Query: 331 YAAVNYSYWADRAKKKPKAKEPT 353
YA VNY ++ +++ K E T
Sbjct: 323 YAFVNYIFFGRGPQRQKKLAEKT 345
>gi|8393390|ref|NP_058761.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Rattus
norvegicus]
gi|57802|emb|CAA33495.1| GABA(A) receptor beta-3 preprotein [Rattus sp.]
Length = 473
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/323 (58%), Positives = 244/323 (75%), Gaps = 2/323 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 24 CAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSI+I +LSWV
Sbjct: 204 ERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSIMITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPT 353
YA VNY ++ +++ K E T
Sbjct: 324 YAFVNYIFFGRGPQRQKKLAEKT 346
>gi|426378386|ref|XP_004055908.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Gorilla gorilla gorilla]
Length = 440
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 240/310 (77%), Gaps = 2/310 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 4 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 63
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 64 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 123
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 124 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 183
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 184 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 243
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 244 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 303
Query: 344 KKKPKAKEPT 353
+++ K E T
Sbjct: 304 QRQKKLAEKT 313
>gi|53765741|gb|AAU93411.1| testis gamma-aminobutyric acid receptor subunit beta 3 [Rattus
norvegicus]
Length = 471
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 240/310 (77%), Gaps = 2/310 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 35 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 94
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 95 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 154
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 155 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 214
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSI+I +LSWVSFWIN++A++ARV
Sbjct: 215 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSIMITILSWVSFWINYDASAARV 274
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 275 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 334
Query: 344 KKKPKAKEPT 353
+++ K E T
Sbjct: 335 QRQKKLAEKT 344
>gi|432949783|ref|XP_004084256.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oryzias latipes]
Length = 517
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/314 (59%), Positives = 242/314 (77%), Gaps = 2/314 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V QT+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY Q W+D R
Sbjct: 32 VKQTVDRLLKGYDIRLRPDFGGPPVRVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKR 91
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
L++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 92 LSYSEIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 151
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ V GVE +LPQF+I+ H
Sbjct: 152 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGVGAVTGVERIELPQFSIVDH 211
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
+ + +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 212 KLISKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 271
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 272 ALGITTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYIFFGRGP 331
Query: 344 KKKPKAKEPTPLGN 357
+++ +A E T L N
Sbjct: 332 QRQKRAAEKTALAN 345
>gi|296475589|tpg|DAA17704.1| TPA: gamma-aminobutyric acid (GABA) A receptor, beta 3 [Bos taurus]
Length = 392
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/321 (58%), Positives = 243/321 (75%), Gaps = 2/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 24 CAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 ERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +++ K E
Sbjct: 324 YAFVNYIFFGRGPQRQKKLAE 344
>gi|301772918|ref|XP_002921880.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Ailuropoda melanoleuca]
Length = 473
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 240/310 (77%), Gaps = 2/310 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 37 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 96
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 97 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 216
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 217 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 276
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 277 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 336
Query: 344 KKKPKAKEPT 353
+++ K E T
Sbjct: 337 QRQKKLAEKT 346
>gi|292615077|ref|XP_002662540.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Danio rerio]
Length = 481
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/327 (57%), Positives = 244/327 (74%), Gaps = 2/327 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAQSANEPGNMSFVKETVDKLLKGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA++ LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYTGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YWK ET V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGETAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+LPQF+I+ ++ R +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 SRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPTPLGN 357
YA VNY ++ + + K E N
Sbjct: 324 YAFVNYIFFGRGPQMQKKLAEKAEKAN 350
>gi|149031468|gb|EDL86448.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_b [Rattus norvegicus]
Length = 473
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 240/310 (77%), Gaps = 2/310 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 37 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 96
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 97 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 216
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 217 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 276
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 277 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 336
Query: 344 KKKPKAKEPT 353
+++ K E T
Sbjct: 337 QRQKKLAEKT 346
>gi|301619763|ref|XP_002939256.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Xenopus (Silurana) tropicalis]
Length = 492
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 254/345 (73%), Gaps = 6/345 (1%)
Query: 19 ESQIGNSDS---EKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMD 75
ES IG S S L +C +S + ++ V +T+ +LL GYDIRLRP+FGGDP+ VGM
Sbjct: 12 ESWIGASLSYLATLLIVCSAQSLPSGNISVVKKTVDKLLKGYDIRLRPDFGGDPVSVGMS 71
Query: 76 LTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFAND 135
+ I+S D ISEV+MDYTITMY Q W+D RLA+++ LTL A+++W+PDT+F ND
Sbjct: 72 IHISSIDQISEVNMDYTITMYFQQSWRDKRLAYTALPLNLTLDNRVADQLWLPDTYFLND 131
Query: 136 KNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTV 195
K SFLH VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT+
Sbjct: 132 KKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTI 191
Query: 196 LDVVMYWK---ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGY 252
D+ +W+ E V GV +LPQFTI+ + TG+Y RLSLSF+++RNIGY
Sbjct: 192 DDIKFFWQGGEEAAVTGVSALELPQFTIIETRLVSKNVVFTTGSYPRLSLSFRIKRNIGY 251
Query: 253 FVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKA 312
F+ QTY+PSILI +LSWVSFWIN++A++ARVALG+TTVLTMTTI+T +R +LP+I YVKA
Sbjct: 252 FILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKA 311
Query: 313 IDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPTPLGN 357
ID+YL+ CFVFVF ALLEYA VNY ++ +++ K E T N
Sbjct: 312 IDVYLMGCFVFVFLALLEYAFVNYVFFGRGPQQQKKLNERTNKAN 356
>gi|194206378|ref|XP_001493125.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Equus caballus]
Length = 473
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 240/310 (77%), Gaps = 2/310 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 37 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 96
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 97 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 216
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 217 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 276
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 277 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 336
Query: 344 KKKPKAKEPT 353
+++ K E T
Sbjct: 337 QRQKKLAEKT 346
>gi|426378384|ref|XP_004055907.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Gorilla gorilla gorilla]
Length = 473
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 240/310 (77%), Gaps = 2/310 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 37 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 96
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 97 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 216
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 217 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 276
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 277 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 336
Query: 344 KKKPKAKEPT 353
+++ K E T
Sbjct: 337 QRQKKLAEKT 346
>gi|84662774|ref|NP_001033790.1| gamma-aminobutyric acid receptor subunit beta-3 isoform b precursor
[Mus musculus]
gi|26350247|dbj|BAC38763.1| unnamed protein product [Mus musculus]
gi|148689913|gb|EDL21860.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_b [Mus musculus]
Length = 473
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 240/310 (77%), Gaps = 2/310 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 37 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 96
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 97 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 216
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 217 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 276
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 277 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 336
Query: 344 KKKPKAKEPT 353
+++ K E T
Sbjct: 337 QRQKKLAEKT 346
>gi|395855530|ref|XP_003800209.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Otolemur garnettii]
Length = 473
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 240/310 (77%), Gaps = 2/310 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 37 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 96
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 97 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 216
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 217 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 276
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 277 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 336
Query: 344 KKKPKAKEPT 353
+++ K E T
Sbjct: 337 QRQKKLAEKT 346
>gi|150247144|ref|NP_001092850.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Bos
taurus]
gi|146186859|gb|AAI40687.1| LOC529593 protein [Bos taurus]
Length = 472
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/321 (58%), Positives = 243/321 (75%), Gaps = 2/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 24 CAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 ERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +++ K E
Sbjct: 324 YAFVNYIFFGRGPQRQKKLAE 344
>gi|12548788|ref|NP_068712.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 2 precursor
[Homo sapiens]
Length = 473
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 240/310 (77%), Gaps = 2/310 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 37 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 96
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 97 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 216
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 217 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 276
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 277 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 336
Query: 344 KKKPKAKEPT 353
+++ K E T
Sbjct: 337 QRQKKLAEKT 346
>gi|197098146|ref|NP_001124777.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Pongo
abelii]
gi|55725861|emb|CAH89710.1| hypothetical protein [Pongo abelii]
gi|55725875|emb|CAH89717.1| hypothetical protein [Pongo abelii]
Length = 473
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 240/310 (77%), Gaps = 2/310 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 37 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 96
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 97 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 216
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 217 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 276
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 277 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 336
Query: 344 KKKPKAKEPT 353
+++ K E T
Sbjct: 337 QRQKKLAEKT 346
>gi|402873751|ref|XP_003900725.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Papio anubis]
Length = 473
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 240/310 (77%), Gaps = 2/310 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 37 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 96
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 97 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 216
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 217 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 276
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 277 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 336
Query: 344 KKKPKAKEPT 353
+++ K E T
Sbjct: 337 QRQKKLAEKT 346
>gi|332843339|ref|XP_003314619.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Pan troglodytes]
Length = 473
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 240/310 (77%), Gaps = 2/310 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 37 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 96
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 97 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 216
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 217 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 276
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 277 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 336
Query: 344 KKKPKAKEPT 353
+++ K E T
Sbjct: 337 QRQKKLAEKT 346
>gi|402873753|ref|XP_003900726.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Papio anubis]
Length = 529
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 240/310 (77%), Gaps = 2/310 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 93 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 152
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 153 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 212
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 213 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 272
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 273 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 332
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 333 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 392
Query: 344 KKKPKAKEPT 353
+++ K E T
Sbjct: 393 QRQKKLAEKT 402
>gi|51491195|emb|CAH18663.1| hypothetical protein [Homo sapiens]
Length = 529
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 240/310 (77%), Gaps = 2/310 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 93 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 152
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 153 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 212
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 213 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 272
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 273 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 332
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 333 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 392
Query: 344 KKKPKAKEPT 353
+++ K E T
Sbjct: 393 QRQKKLAEKT 402
>gi|189520298|ref|XP_695300.3| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
isoform 2 [Danio rerio]
Length = 471
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/327 (57%), Positives = 244/327 (74%), Gaps = 2/327 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAQSANEPGNMSFVKETVDKLLKGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA++ LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYTGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YWK ET V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGETAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+LPQF+I+ ++ R +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 SRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPTPLGN 357
YA VNY ++ + + K E N
Sbjct: 324 YAFVNYIFFGRGPQMQKKLAEKAEKAN 350
>gi|156717244|ref|NP_001096164.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 precursor
[Xenopus (Silurana) tropicalis]
gi|134025815|gb|AAI36050.1| gabrb3 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/314 (59%), Positives = 241/314 (76%), Gaps = 2/314 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 37 VKETVDKLLKGYDIRLRPDFGGSPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 96
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA++ LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 97 LAYTGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW + V GVE +LPQF+I+ H
Sbjct: 157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWLGGDNAVTGVERIELPQFSIMDH 216
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
+ + ATG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 217 KLVSKNVVFATGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 276
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 277 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 336
Query: 344 KKKPKAKEPTPLGN 357
+ + K E + N
Sbjct: 337 QMQKKLAEKSAKSN 350
>gi|62917|emb|CAA39969.1| GABA-A receptor,beta-4 subunit [Gallus gallus]
Length = 405
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/327 (56%), Positives = 248/327 (75%), Gaps = 2/327 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C +S +T ++ V + + +LL GYD+RLRP+FGG+P+ VGM + I+S D ISEV+MDYT
Sbjct: 23 CCAQSPSTGNISVVKEIVDKLLKGYDVRLRPDFGGNPVTVGMSIHISSIDQISEVNMDYT 82
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
ITMY Q W+D RLA++ LTL A+++W+PDT+F NDK SFLH VT +N+++RL
Sbjct: 83 ITMYFQQSWRDKRLAYNDLPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRL 142
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYTV D+V +W+ ++ V G+
Sbjct: 143 HPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGM 202
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQFTI+ R+ TG+Y RLSLSF+++RNIGYF+ QTY+PSILI +LSWV
Sbjct: 203 EVLELPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWV 262
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALG+TTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 263 SFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLE 322
Query: 331 YAAVNYSYWADRAKKKPKAKEPTPLGN 357
YA VNY ++ +++ K E N
Sbjct: 323 YAFVNYIFFGRGPRQQKKQSERISKAN 349
>gi|348513619|ref|XP_003444339.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oreochromis niloticus]
Length = 475
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/327 (57%), Positives = 244/327 (74%), Gaps = 2/327 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAQSVNEPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA++ LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYAGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YWK ET V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGETAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ R +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 KRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPTPLGN 357
YA VNY ++ + + K E N
Sbjct: 324 YAFVNYIFFGRGPQMQKKLAERAQKAN 350
>gi|156717762|ref|NP_001096421.1| gamma-aminobutyric acid (GABA) A receptor, beta 2 precursor
[Xenopus (Silurana) tropicalis]
gi|301624061|ref|XP_002941329.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Xenopus (Silurana) tropicalis]
gi|134026224|gb|AAI36090.1| LOC100125027 protein [Xenopus (Silurana) tropicalis]
Length = 474
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/328 (57%), Positives = 245/328 (74%), Gaps = 2/328 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + + V +T+ +LL GYDIRLRP+FGGDP+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCTQSVNDPSNMTLVKETVDRLLKGYDIRLRPDFGGDPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYSVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIGFYWRGGNNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
VE +LPQF+I+ + R +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VERLELPQFSIIDYNLLSRNVVFSTGSYPRLSLSFKLRRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKKPKAKEPTPLGN 357
EYA VNY ++ +++ +A E N
Sbjct: 322 EYALVNYIFFGRGPQRQKRAAERAAHAN 349
>gi|14714965|gb|AAH10641.1| Gamma-aminobutyric acid (GABA) A receptor, beta 3 [Homo sapiens]
gi|157928120|gb|ABW03356.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
Length = 473
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/323 (58%), Positives = 243/323 (75%), Gaps = 2/323 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 24 CAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD NCT+EIESYGYT D+ YW+ + V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDELNCTLEIESYGYTTDDIEFYWRGGDKAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 ERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPT 353
YA VNY ++ +++ K E T
Sbjct: 324 YAFVNYIFFGRGPQRQKKLAEKT 346
>gi|354491372|ref|XP_003507829.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Cricetulus griseus]
Length = 472
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 243/321 (75%), Gaps = 2/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C S+ ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSSSEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +KK +K+
Sbjct: 324 YAFVNYIFFGKGPQKKGASKQ 344
>gi|267844856|ref|NP_001161175.1| gamma-aminobutyric acid receptor subunit beta-4 isoform 1 precursor
[Gallus gallus]
gi|120775|sp|P24045.1|GBRB4_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit beta-4;
AltName: Full=GABA(A) receptor subunit beta-4; Flags:
Precursor
Length = 488
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/327 (56%), Positives = 248/327 (75%), Gaps = 2/327 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C +S +T ++ V + + +LL GYD+RLRP+FGG+P+ VGM + I+S D ISEV+MDYT
Sbjct: 23 CCAQSPSTGNISVVKEIVDKLLKGYDVRLRPDFGGNPVTVGMSIHISSIDQISEVNMDYT 82
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
ITMY Q W+D RLA++ LTL A+++W+PDT+F NDK SFLH VT +N+++RL
Sbjct: 83 ITMYFQQSWRDKRLAYNDLPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRL 142
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYTV D+V +W+ ++ V G+
Sbjct: 143 HPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGM 202
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQFTI+ R+ TG+Y RLSLSF+++RNIGYF+ QTY+PSILI +LSWV
Sbjct: 203 EVLELPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWV 262
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALG+TTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 263 SFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLE 322
Query: 331 YAAVNYSYWADRAKKKPKAKEPTPLGN 357
YA VNY ++ +++ K E N
Sbjct: 323 YAFVNYIFFGRGPRQQKKQSERISKAN 349
>gi|267844858|ref|NP_001161176.1| gamma-aminobutyric acid receptor subunit beta-4 isoform 2 precursor
[Gallus gallus]
Length = 484
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/327 (56%), Positives = 248/327 (75%), Gaps = 2/327 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C +S +T ++ V + + +LL GYD+RLRP+FGG+P+ VGM + I+S D ISEV+MDYT
Sbjct: 23 CCAQSPSTGNISVVKEIVDKLLKGYDVRLRPDFGGNPVTVGMSIHISSIDQISEVNMDYT 82
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
ITMY Q W+D RLA++ LTL A+++W+PDT+F NDK SFLH VT +N+++RL
Sbjct: 83 ITMYFQQSWRDKRLAYNDLPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRL 142
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYTV D+V +W+ ++ V G+
Sbjct: 143 HPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGM 202
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQFTI+ R+ TG+Y RLSLSF+++RNIGYF+ QTY+PSILI +LSWV
Sbjct: 203 EVLELPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWV 262
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALG+TTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 263 SFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLE 322
Query: 331 YAAVNYSYWADRAKKKPKAKEPTPLGN 357
YA VNY ++ +++ K E N
Sbjct: 323 YAFVNYIFFGRGPRQQKKQSERISKAN 349
>gi|449483363|ref|XP_002194694.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Taeniopygia guttata]
Length = 443
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/314 (59%), Positives = 241/314 (76%), Gaps = 2/314 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 4 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 63
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA++ LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 64 LAYAGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 123
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ +
Sbjct: 124 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSIVEY 183
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
+ ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 184 RLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 243
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 244 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGKGP 303
Query: 344 KKKPKAKEPTPLGN 357
+++ K E T N
Sbjct: 304 QRQKKLAEKTTKAN 317
>gi|126337134|ref|XP_001362985.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Monodelphis domestica]
Length = 473
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/323 (57%), Positives = 244/323 (75%), Gaps = 2/323 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 24 CAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA++ LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYAGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ H + ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 ERIELPQFSIVEHRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPT 353
YA VNY ++ +++ K E +
Sbjct: 324 YAFVNYIFFGRGPQRQKKLAEKS 346
>gi|395527076|ref|XP_003765677.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Sarcophilus harrisii]
Length = 472
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/323 (57%), Positives = 244/323 (75%), Gaps = 2/323 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 24 CAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA++ LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYAGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ H + ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 ERIELPQFSIVEHRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPT 353
YA VNY ++ +++ K E +
Sbjct: 324 YAFVNYIFFGRGPQRQKKLAEKS 346
>gi|46048684|ref|NP_990677.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Gallus
gallus]
gi|120772|sp|P19019.1|GBRB3_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|62893|emb|CAA38147.1| precursor peptide [Gallus gallus]
Length = 476
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/327 (56%), Positives = 245/327 (74%), Gaps = 2/327 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 24 CAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA++ LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYAGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ + + ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 ERIELPQFSIVEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPTPLGN 357
YA VNY ++ +++ K E + N
Sbjct: 324 YAFVNYIFFGKGPQRQKKLAEKSAKAN 350
>gi|189067536|dbj|BAG37715.1| unnamed protein product [Homo sapiens]
Length = 473
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 239/310 (77%), Gaps = 2/310 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 37 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 96
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 97 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 216
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 217 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 276
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ C VFVF ALLEYA VNY ++
Sbjct: 277 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCLVFVFLALLEYAFVNYIFFGRGP 336
Query: 344 KKKPKAKEPT 353
+++ K E T
Sbjct: 337 QRQKKLAEKT 346
>gi|327260679|ref|XP_003215161.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Anolis carolinensis]
Length = 481
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/328 (56%), Positives = 249/328 (75%), Gaps = 2/328 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSANDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKKPKAKEPTPLGN 357
EYA VNY ++ +++ KA E N
Sbjct: 322 EYALVNYIFFGRGPQRQKKAAERAASAN 349
>gi|332218624|ref|XP_003258454.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Nomascus leucogenys]
Length = 474
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/321 (57%), Positives = 243/321 (75%), Gaps = 2/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C ++ ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSTSEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQPWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +KK +K+
Sbjct: 324 YAFVNYIFFGKGPQKKGASKQ 344
>gi|6978867|ref|NP_037088.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Rattus
norvegicus]
gi|120769|sp|P15431.1|GBRB1_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|57794|emb|CAA33493.1| GABA(A) receptor beta-1 preprotein [Rattus sp.]
gi|149035300|gb|EDL90004.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Rattus
norvegicus]
Length = 474
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 242/321 (75%), Gaps = 2/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C S ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSSNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +KK +K+
Sbjct: 324 YAFVNYIFFGKGPQKKGASKQ 344
>gi|327283472|ref|XP_003226465.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Anolis carolinensis]
Length = 504
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/345 (53%), Positives = 260/345 (75%), Gaps = 3/345 (0%)
Query: 10 PDFNSENELESQIGNSDSEKLR-LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGD 68
P F + +E E+ ++ +E + + +++ +T ++ V + + +LL GYD+RLRP+FGG+
Sbjct: 14 PRFGALSEAEAGGVSTPAEGRKAVSEEENPSTGNISVVKEIVDKLLKGYDVRLRPDFGGN 73
Query: 69 PLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVP 128
P+ VGM + I+S D ISEV+MDYTITMY Q W+D RLA+S LTL A+++W+P
Sbjct: 74 PVTVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLAYSDLPLNLTLDNRVADQLWLP 133
Query: 129 DTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEI 188
DT+F NDK SFLH VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EI
Sbjct: 134 DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEI 193
Query: 189 ESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKL 246
ESYGYTV D+V +W+ + V G+++ +LPQFTI+ R+ TG+Y RLSLSF++
Sbjct: 194 ESYGYTVDDIVFFWQGNNSAVTGMKDLELPQFTIIEQRLVTREVVFTTGSYLRLSLSFRI 253
Query: 247 QRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPR 306
+RNIGYF+ QTY+PS+LI +LSWVSFWIN++A++ARVALG+TTVLTMTTI+T +R +LP+
Sbjct: 254 KRNIGYFILQTYMPSVLITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPK 313
Query: 307 ISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKE 351
I YVKAID+YL+ CFVFVF ALLEYA VNY ++ +++ K E
Sbjct: 314 IPYVKAIDVYLMGCFVFVFLALLEYAFVNYIFFGRGPRQQKKQSE 358
>gi|6679907|ref|NP_032095.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Mus
musculus]
gi|1730183|sp|P50571.1|GBRB1_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|755155|gb|AAA79973.1| GABA-benzodiazepine receptor beta-1 subunit [Mus musculus]
gi|5804941|emb|CAA38993.1| GABA(A) receptor beta-1 subunit [Mus musculus]
gi|120577721|gb|AAI30259.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Mus
musculus]
gi|148705866|gb|EDL37813.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1, isoform
CRA_b [Mus musculus]
gi|187957278|gb|AAI57921.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Mus
musculus]
gi|1095218|prf||2108275A GABA-A receptor:SUBUNIT=beta1
Length = 474
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/321 (58%), Positives = 242/321 (75%), Gaps = 2/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C S ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSSNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +KK +K+
Sbjct: 324 YAFVNYIFFGKGPQKKGASKQ 344
>gi|327260675|ref|XP_003215159.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Anolis carolinensis]
Length = 474
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/328 (56%), Positives = 249/328 (75%), Gaps = 2/328 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSANDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKKPKAKEPTPLGN 357
EYA VNY ++ +++ KA E N
Sbjct: 322 EYALVNYIFFGRGPQRQKKAAERAASAN 349
>gi|327260683|ref|XP_003215163.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 5 [Anolis carolinensis]
Length = 491
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/328 (56%), Positives = 249/328 (75%), Gaps = 2/328 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSANDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKKPKAKEPTPLGN 357
EYA VNY ++ +++ KA E N
Sbjct: 322 EYALVNYIFFGRGPQRQKKAAERAASAN 349
>gi|345324528|ref|XP_001505697.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3, partial
[Ornithorhynchus anatinus]
Length = 470
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/314 (59%), Positives = 239/314 (76%), Gaps = 2/314 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V T+ +LL GYDIRLRP+FGG P+ VGM + IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 32 VKDTVDKLLEGYDIRLRPDFGGPPVCVGMSIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 91
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA++ LTL A+++WVPDT+F NDK SF+H VT +N ++RL+ DG++ YG+R T
Sbjct: 92 LAYAGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNSMIRLHPDGTVLYGLRIT 151
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ ++ V GVE +LPQF+I+ +
Sbjct: 152 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDSAVTGVERIELPQFSIVEY 211
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
+ ATG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 212 RLVSKNVVFATGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 271
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 272 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 331
Query: 344 KKKPKAKEPTPLGN 357
+++ K E T N
Sbjct: 332 QRQKKLAEKTAKAN 345
>gi|301763282|ref|XP_002917058.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Ailuropoda melanoleuca]
Length = 475
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/321 (57%), Positives = 242/321 (75%), Gaps = 2/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSANEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +KK +K+
Sbjct: 324 YAFVNYIFFGKGPQKKGASKQ 344
>gi|194097327|ref|NP_000803.2| gamma-aminobutyric acid receptor subunit beta-1 precursor [Homo
sapiens]
gi|114594931|ref|XP_001154620.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Pan troglodytes]
gi|395734909|ref|XP_002814763.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Pongo abelii]
gi|397490147|ref|XP_003816069.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Pan paniscus]
gi|23831128|sp|P18505.2|GBRB1_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|182923|gb|AAA35862.1| gamma-aminobutyric acid receptor beta-1 subunit, partial [Homo
sapiens]
gi|119613437|gb|EAW93031.1| gamma-aminobutyric acid (GABA) A receptor, beta 1, isoform CRA_b
[Homo sapiens]
gi|168277852|dbj|BAG10904.1| gamma-aminobutyric-acid receptor subunit beta-1 precursor
[synthetic construct]
gi|189053428|dbj|BAG35594.1| unnamed protein product [Homo sapiens]
Length = 474
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/321 (57%), Positives = 242/321 (75%), Gaps = 2/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSTNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +KK +K+
Sbjct: 324 YAFVNYIFFGKGPQKKGASKQ 344
>gi|410957678|ref|XP_003985452.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Felis catus]
Length = 476
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/321 (57%), Positives = 242/321 (75%), Gaps = 2/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSANEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +KK +K+
Sbjct: 324 YAFVNYIFFGKGPQKKGASKQ 344
>gi|334350266|ref|XP_001376986.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Monodelphis domestica]
Length = 480
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/318 (57%), Positives = 244/318 (76%), Gaps = 2/318 (0%)
Query: 36 KSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITM 95
+S + + V + + +LL GYD+RLRP+FGGDP+ VGM + I+S D ISEV+MDYTITM
Sbjct: 23 QSESPTNMTQVKEIVDRLLKGYDVRLRPDFGGDPVTVGMSIHISSIDQISEVNMDYTITM 82
Query: 96 YLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGD 155
Y Q W+D RLA+S D LTL A+++W+PDT+F NDK SFLH VT +N+++RL+ D
Sbjct: 83 YFQQSWRDKRLAYSDFDFNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPD 142
Query: 156 GSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEA 213
G++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYTV D+V YW+ ++ V G++
Sbjct: 143 GTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFYWQGNDSAVTGMDTL 202
Query: 214 QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFW 273
+LPQFTI+ R+ TG+Y RLSLSF+++RNIGYF+ QTY+PS+LI +LSWVSFW
Sbjct: 203 ELPQFTIMEQRLVTREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSVLITILSWVSFW 262
Query: 274 INHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAA 333
IN++A++ARVALG+TTVLTMTTI+T +R +LP+I YVKAIDIYL+ CFVFVF ALLEYA
Sbjct: 263 INYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAY 322
Query: 334 VNYSYWADRAKKKPKAKE 351
VNY ++ ++ + +
Sbjct: 323 VNYIFFGRGPSEQSRQAQ 340
>gi|390460895|ref|XP_002745915.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Callithrix jacchus]
Length = 474
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/321 (57%), Positives = 242/321 (75%), Gaps = 2/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSANEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +KK +K+
Sbjct: 324 YAFVNYIFFGKGPQKKGASKQ 344
>gi|355687261|gb|EHH25845.1| GABA(A) receptor subunit beta-1 [Macaca mulatta]
gi|355749255|gb|EHH53654.1| GABA(A) receptor subunit beta-1 [Macaca fascicularis]
gi|380784201|gb|AFE63976.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Macaca
mulatta]
Length = 474
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/321 (57%), Positives = 242/321 (75%), Gaps = 2/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSTNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +KK +K+
Sbjct: 324 YAFVNYIFFGKGPQKKGASKQ 344
>gi|395542827|ref|XP_003773326.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Sarcophilus harrisii]
Length = 475
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/320 (58%), Positives = 241/320 (75%), Gaps = 2/320 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAQSANEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E+ V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGESAVSGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NNIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAK 350
YA VNY ++ +KK K
Sbjct: 324 YAFVNYIFFGRGPQKKGAGK 343
>gi|344288345|ref|XP_003415911.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Loxodonta africana]
Length = 474
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/321 (57%), Positives = 242/321 (75%), Gaps = 2/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAPHANEPSNMSYVKETVDKLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +KK +K+
Sbjct: 324 YAFVNYIFFGKGPQKKGASKQ 344
>gi|126331665|ref|XP_001364516.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Monodelphis domestica]
Length = 475
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/320 (58%), Positives = 241/320 (75%), Gaps = 2/320 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAQSANEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E+ V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGESAVSGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NNIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAK 350
YA VNY ++ +KK K
Sbjct: 324 YAFVNYIFFGRGPQKKGAGK 343
>gi|327281228|ref|XP_003225351.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Anolis carolinensis]
Length = 447
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/311 (59%), Positives = 240/311 (77%), Gaps = 2/311 (0%)
Query: 43 LANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWK 102
++ V +T+ +LL GYDIRLRP+FGG P+ VGM + IAS D +SEV+MDYT+TMY Q W+
Sbjct: 7 MSYVKETVDRLLKGYDIRLRPDFGGSPVDVGMRIEIASIDMVSEVNMDYTLTMYFQQSWR 66
Query: 103 DDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
D RL++S LTL A+ +WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+
Sbjct: 67 DKRLSYSGIPLNLTLDNRVADNLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 126
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTI 220
R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E+ V GV + +LPQF+I
Sbjct: 127 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGESAVSGVSKIELPQFSI 186
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+ + ++ + ATG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWVSFWIN++A++
Sbjct: 187 MDYRMISKRVEFATGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 246
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLEYA VNY+++
Sbjct: 247 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYTFFG 306
Query: 341 DRAKKKPKAKE 351
+ + KA E
Sbjct: 307 KGPQHQKKAAE 317
>gi|327260677|ref|XP_003215160.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Anolis carolinensis]
Length = 511
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/332 (56%), Positives = 251/332 (75%), Gaps = 2/332 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSANDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKKPKAKEPTPLGNYIRL 361
EYA VNY ++ +++ KA E N +L
Sbjct: 322 EYALVNYIFFGRGPQRQKKAAERAASANNEKL 353
>gi|403284706|ref|XP_003933699.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Saimiri boliviensis boliviensis]
Length = 474
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/321 (57%), Positives = 241/321 (75%), Gaps = 2/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSANEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +KK K+
Sbjct: 324 YAFVNYIFFGKGPQKKGAGKQ 344
>gi|395546003|ref|XP_003774884.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Sarcophilus harrisii]
Length = 458
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/317 (58%), Positives = 245/317 (77%), Gaps = 5/317 (1%)
Query: 40 TERLANVTQT---ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMY 96
TE AN+TQ + +LL GYD+RLRP+FGG+P+ VGM + I+S D ISEV+MDYTITMY
Sbjct: 2 TETSANMTQVKEIVDRLLKGYDVRLRPDFGGNPVTVGMSIHISSIDQISEVNMDYTITMY 61
Query: 97 LNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDG 156
Q W+D RLA+S D LTL A+++W+PDT+F NDK SFLH VT +N+++RL+ DG
Sbjct: 62 FQQSWRDKRLAYSDFDFNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDG 121
Query: 157 SITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQ 214
++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYTV D+V YW+ ++ V G++ +
Sbjct: 122 TVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFYWQGNDSAVTGMDTLE 181
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
LPQFTI+ R+ TG+Y RLSLSF+++RNIGYF+ QTY+PS+LI +LSWVSFWI
Sbjct: 182 LPQFTIMEQRLVTREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSVLITILSWVSFWI 241
Query: 275 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
N++A++ARVALG+TTVLTMTTI+T +R +LP+I YVKAIDIYL+ CFVFVF ALLEYA V
Sbjct: 242 NYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFV 301
Query: 335 NYSYWADRAKKKPKAKE 351
NY ++ ++ + +
Sbjct: 302 NYIFFGRGPSEQSRQAQ 318
>gi|327260681|ref|XP_003215162.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 4 [Anolis carolinensis]
Length = 528
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/328 (56%), Positives = 249/328 (75%), Gaps = 2/328 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSANDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKKPKAKEPTPLGN 357
EYA VNY ++ +++ KA E N
Sbjct: 322 EYALVNYIFFGRGPQRQKKAAERAASAN 349
>gi|426231665|ref|XP_004009859.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Ovis
aries]
Length = 474
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/321 (57%), Positives = 241/321 (75%), Gaps = 2/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSANEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +KK K+
Sbjct: 324 YAFVNYIFFGKGPQKKGAGKQ 344
>gi|27806987|ref|NP_776969.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Bos
taurus]
gi|120766|sp|P08220.1|GBRB1_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|757756|emb|CAA29190.1| GABA beta subunit [Bos taurus]
gi|296486584|tpg|DAA28697.1| TPA: gamma-aminobutyric acid receptor subunit beta-1 precursor [Bos
taurus]
gi|225661|prf||1309301B GABA/benzodiazepine receptor beta
Length = 474
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/321 (57%), Positives = 241/321 (75%), Gaps = 2/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSANEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +KK K+
Sbjct: 324 YAFVNYIFFGKGPQKKGAGKQ 344
>gi|31635|emb|CAA32875.1| GABA-A receptor beta 1 subunit [Homo sapiens]
Length = 474
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/321 (57%), Positives = 241/321 (75%), Gaps = 2/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + + V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSTNEPSNMPYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +KK +K+
Sbjct: 324 YAFVNYIFFGKGPQKKGASKQ 344
>gi|432899761|ref|XP_004076626.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Oryzias latipes]
Length = 478
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/305 (60%), Positives = 238/305 (78%), Gaps = 2/305 (0%)
Query: 49 TISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF 108
T+ +LL GYDIRLRP+FGG P+ VGM + IAS DSISEV+MDYTITMY Q W D RLA+
Sbjct: 7 TVDKLLKGYDIRLRPDFGGPPVIVGMSINIASIDSISEVNMDYTITMYFQQSWTDKRLAY 66
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
D LTL A+++W+PDT+F NDK SFLH VT +N+++RL+ DG++ YG+R TTT
Sbjct: 67 GELDLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 126
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETN 226
ACMMDL YPLD QNCT+EIESYGYT D+V +W+ + V GV++ +LPQF+I+
Sbjct: 127 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGNSAVTGVDKLELPQFSIVELRLV 186
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
R+ + ATG+Y RLSLSF+++RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARVALG
Sbjct: 187 SREVRFATGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALG 246
Query: 287 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKK 346
+TTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++ ++
Sbjct: 247 VTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPAQQ 306
Query: 347 PKAKE 351
K E
Sbjct: 307 KKLSE 311
>gi|260812521|ref|XP_002600969.1| hypothetical protein BRAFLDRAFT_79167 [Branchiostoma floridae]
gi|229286259|gb|EEN56981.1| hypothetical protein BRAFLDRAFT_79167 [Branchiostoma floridae]
Length = 380
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/319 (61%), Positives = 250/319 (78%), Gaps = 2/319 (0%)
Query: 29 KLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVS 88
+ RL ++ +RLANVT+T+ +LHGYDIRLRP+F GDPL +GM + IAS DSISEV+
Sbjct: 9 RTRLTEEEVEEYQRLANVTETVRGILHGYDIRLRPDFAGDPLVIGMSIEIASIDSISEVN 68
Query: 89 MDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNK 148
MDYT+TMY Q W+D RL+++S LTL G AE IWVPDT+F NDK S+LH VT +N+
Sbjct: 69 MDYTMTMYFQQTWRDPRLSYTSVPHNLTLDGRVAESIWVPDTYFLNDKESYLHGVTVKNR 128
Query: 149 LVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TP 206
++RL+ DGS+ YG+R TTT AC M+L YPLD QNCT+EIESYGYT D+ +WK+
Sbjct: 129 MLRLHHDGSVLYGLRITTTAACQMNLRRYPLDEQNCTLEIESYGYTTDDLEFHWKDGKDA 188
Query: 207 VRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVM 266
V G ++ +LPQF I+ + + + +TG Y RLSLSF+L+RNIGYF+ QTY+PS+LIV+
Sbjct: 189 VIGWDQIELPQFDIVDYNVEQKVIQFSTGAYPRLSLSFRLKRNIGYFMLQTYMPSVLIVI 248
Query: 267 LSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFA 326
LSWVSFWIN EAT+ARVALGITTVLT+TTI+T VR+SLP+ISYVKAID+YL+ CFVFVFA
Sbjct: 249 LSWVSFWINPEATAARVALGITTVLTVTTINTSVRASLPKISYVKAIDLYLMGCFVFVFA 308
Query: 327 ALLEYAAVNYSYWADRAKK 345
AL+EYA VNY Y+ + K+
Sbjct: 309 ALIEYAVVNYKYFGSKPKR 327
>gi|148744735|gb|AAI42873.1| Unknown (protein for IMAGE:7452885) [Danio rerio]
Length = 427
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/328 (56%), Positives = 246/328 (75%), Gaps = 2/328 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 24 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVGVGMNIDIASIDMVSEVNMDY 83
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 84 TLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 143
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ V G
Sbjct: 144 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGNHAVTG 203
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
VE +LPQF+I+ ++ + +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 204 VERIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 263
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 264 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 323
Query: 330 EYAAVNYSYWADRAKKKPKAKEPTPLGN 357
EYA VNY ++ +++ KA E N
Sbjct: 324 EYALVNYIFFGRGPQQQKKAAERASKAN 351
>gi|395843747|ref|XP_003794635.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Otolemur garnettii]
Length = 474
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/320 (58%), Positives = 240/320 (75%), Gaps = 2/320 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSANEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAK 350
YA VNY ++ +KK K
Sbjct: 324 YAFVNYIFFGKGPQKKGAGK 343
>gi|432849823|ref|XP_004066630.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oryzias latipes]
Length = 484
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/327 (57%), Positives = 241/327 (73%), Gaps = 2/327 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C K ++ V QT+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAKSVNEPGNMSIVKQTVDKLLKGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA+ LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYLGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YWK E+ V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGESAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+LPQF+I+ ++ + +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 TRIELPQFSIVDYKLVSKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFV VF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPTPLGN 357
YA VNY ++ + + K E N
Sbjct: 324 YAFVNYIFFGRGPQMQKKLAEKAEKAN 350
>gi|410920808|ref|XP_003973875.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Takifugu rubripes]
Length = 474
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 242/324 (74%), Gaps = 2/324 (0%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
+RL + ++ V T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+M
Sbjct: 20 MRLRSQSVNQPGNMSFVKDTVDKLLKGYDIRLRPDFGGRPVAVGMSIDVASIDMVSEVNM 79
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYT+TMY QYW+D RLA+ LTL A+++WVPDT+F NDK SF+H VT +N++
Sbjct: 80 DYTLTMYFQQYWRDKRLAYVGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRM 139
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YWK +T V
Sbjct: 140 IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDTAV 199
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GV +LPQF+I+ ++ R +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +L
Sbjct: 200 TGVTRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITIL 259
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF A
Sbjct: 260 SWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLA 319
Query: 328 LLEYAAVNYSYWADRAKKKPKAKE 351
LLEYA VNY ++ + + K E
Sbjct: 320 LLEYAFVNYIFFGRGPQMQKKLAE 343
>gi|432098878|gb|ELK28373.1| Gamma-aminobutyric acid receptor subunit beta-2 [Myotis davidii]
Length = 473
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/322 (57%), Positives = 247/322 (76%), Gaps = 2/322 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGEDKAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKKPKAKE 351
EYA VNY ++ +++ KA E
Sbjct: 322 EYALVNYIFFGRGPQRQKKAAE 343
>gi|3980057|emb|CAA39970.1| GABA-A receptor beta-4 subunit [Gallus gallus]
Length = 374
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/315 (57%), Positives = 244/315 (77%), Gaps = 2/315 (0%)
Query: 39 TTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLN 98
+T ++ V + + +LL GYD+RLRP+FGG+P+ VGM + I+S D ISEV+MDYTITMY
Sbjct: 2 STGNISVVKEIVDKLLKGYDVRLRPDFGGNPVTVGMSIHISSIDQISEVNMDYTITMYFQ 61
Query: 99 QYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSI 158
Q W+D RLA++ LTL A+++W+PDT+F NDK SFLH VT +N+++RL+ DG++
Sbjct: 62 QSWRDKRLAYNDLPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTV 121
Query: 159 TYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLP 216
YG+R TTT ACMMDL YPLD QNCT+EIESYGYTV D+V +W+ ++ V G+E +LP
Sbjct: 122 LYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGMEVLELP 181
Query: 217 QFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 276
QFTI+ R+ TG+Y RLSLSF+++RNIGYF+ QTY+PSILI +LSWVSFWIN+
Sbjct: 182 QFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINY 241
Query: 277 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+A++ARVALG+TTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY
Sbjct: 242 DASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNY 301
Query: 337 SYWADRAKKKPKAKE 351
++ +++ K E
Sbjct: 302 IFFGRGPRQQKKQSE 316
>gi|410906073|ref|XP_003966516.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Takifugu rubripes]
Length = 482
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/327 (56%), Positives = 241/327 (73%), Gaps = 2/327 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C K ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAKSVNEPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA+ LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYLGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ E+ V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGESAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+LPQF+I+ ++ R +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 TRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFV VF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPTPLGN 357
YA VNY ++ + + K E N
Sbjct: 324 YAFVNYIFFGRGPQMQKKLAEKAEKAN 350
>gi|326677883|ref|XP_694878.5| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4, partial
[Danio rerio]
Length = 455
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/305 (59%), Positives = 239/305 (78%), Gaps = 2/305 (0%)
Query: 49 TISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF 108
T+ +LL GYDIRLRP+FGG P+ VGM + IAS DSISEV+MDYTITMY Q W+D RLA+
Sbjct: 14 TVDKLLKGYDIRLRPDFGGPPVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAY 73
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
+ LTL A+++W+PDT+F NDK SFLH VT +N+++RL+ DG++ YG+R TTT
Sbjct: 74 AEMALNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 133
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETN 226
ACMMDL YPLD QNCT+EIESYGYT D+V +W+ + V GV++ +LPQF+I+
Sbjct: 134 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDNAVTGVDKLELPQFSIVELRLV 193
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
R+ + TG+Y RLSLSF+++RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARVALG
Sbjct: 194 SREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALG 253
Query: 287 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKK 346
+TTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++ +++
Sbjct: 254 VTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPQQQ 313
Query: 347 PKAKE 351
K E
Sbjct: 314 KKINE 318
>gi|348506723|ref|XP_003440907.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oreochromis niloticus]
Length = 482
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/327 (56%), Positives = 241/327 (73%), Gaps = 2/327 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C K ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAKSVNEPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY QYW+D RLA+ LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQYWRDKRLAYVGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YWK E+ V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGESAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+LPQF+I+ ++ + +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 204 TRIELPQFSIVDYKLVSKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFV VF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKEPTPLGN 357
YA VNY ++ + + K E N
Sbjct: 324 YAFVNYIFFGRGPQMQKKLAEKAEKAN 350
>gi|47219404|emb|CAG01567.1| unnamed protein product [Tetraodon nigroviridis]
Length = 451
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/303 (60%), Positives = 237/303 (78%), Gaps = 2/303 (0%)
Query: 49 TISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF 108
T+ +LL GYDIRLRP+FGG P+ VGM + IAS DSISEV+MDYTITMY Q W+D RLA+
Sbjct: 16 TVDKLLKGYDIRLRPDFGGPPVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAY 75
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
LTL A+++W+PDT+F NDK SFLH VT +N+++RL+ DG++ YG+R TTT
Sbjct: 76 GELKLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 135
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETN 226
ACMMDL YPLD QNCT+EIESYGYT D+V +W+ + V GV++ +LPQF+I+
Sbjct: 136 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDNAVTGVDKLELPQFSIVDIRLV 195
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
R+ + TG+Y RLSLSF+++RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARVALG
Sbjct: 196 SREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALG 255
Query: 287 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKK 346
+TTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++ ++
Sbjct: 256 VTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPAQQ 315
Query: 347 PKA 349
P A
Sbjct: 316 PLA 318
>gi|326924418|ref|XP_003208424.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Meleagris gallopavo]
Length = 498
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/315 (57%), Positives = 244/315 (77%), Gaps = 2/315 (0%)
Query: 39 TTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLN 98
+T ++ V + + +LL GYD+RLRP+FGG+P+ VGM + I+S D ISEV+MDYTITMY
Sbjct: 43 STGNISVVKEIVDKLLKGYDVRLRPDFGGNPVTVGMSIHISSIDQISEVNMDYTITMYFQ 102
Query: 99 QYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSI 158
Q W+D RLA++ LTL A+++W+PDT+F NDK SFLH VT +N+++RL+ DG++
Sbjct: 103 QSWRDKRLAYNDLPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTV 162
Query: 159 TYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLP 216
YG+R TTT ACMMDL YPLD QNCT+EIESYGYTV D+V +W+ ++ V G+E +LP
Sbjct: 163 LYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGMEVLELP 222
Query: 217 QFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 276
QFTI+ R+ TG+Y RLSLSF+++RNIGYF+ QTY+PSILI +LSWVSFWIN+
Sbjct: 223 QFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINY 282
Query: 277 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+A++ARVALG+TTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY
Sbjct: 283 DASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNY 342
Query: 337 SYWADRAKKKPKAKE 351
++ +++ K E
Sbjct: 343 IFFGRGPRQQKKQSE 357
>gi|432856050|ref|XP_004068345.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oryzias latipes]
Length = 496
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/308 (60%), Positives = 237/308 (76%), Gaps = 2/308 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT+TMY QYW+D R
Sbjct: 58 VKETVDKLLKGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKR 117
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+ LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 118 LAYLGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 177
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YWK +T V GV +LPQF+I+ +
Sbjct: 178 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDTAVTGVTRIELPQFSIVDY 237
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
+ R +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 238 KLVSRNVVFSTGAYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 297
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 298 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 357
Query: 344 KKKPKAKE 351
+ + K E
Sbjct: 358 QMQKKLAE 365
>gi|47214122|emb|CAG01380.1| unnamed protein product [Tetraodon nigroviridis]
Length = 450
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/308 (60%), Positives = 235/308 (76%), Gaps = 2/308 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT+TMY QYW+D R
Sbjct: 12 VKDTVDKLLKGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKR 71
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+ LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 72 LAYVGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 131
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YWK E V GV +LPQF+I+ +
Sbjct: 132 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGEIAVTGVTRIELPQFSIVDY 191
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
+ R +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 192 KLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 251
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 252 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGP 311
Query: 344 KKKPKAKE 351
+ + K E
Sbjct: 312 QMQKKLAE 319
>gi|189099244|gb|ACD76859.1| gamma-aminobutyric acid A receptor beta 3 [Felis catus]
Length = 408
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/300 (61%), Positives = 232/300 (77%), Gaps = 2/300 (0%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVL 115
GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D RLA+S L
Sbjct: 2 GYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNL 61
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
TL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R TTT ACMMDL
Sbjct: 62 TLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLR 121
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
YPLD QNCT+EIESYGYT D+ YW + V GVE +LPQF+I+ H R A
Sbjct: 122 RYPLDEQNCTLEIESYGYTTDDIEFYWHGGDKAVTGVERIELPQFSIVEHRLVSRNVVFA 181
Query: 234 TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTM 293
TG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARVALGITTVLTM
Sbjct: 182 TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTM 241
Query: 294 TTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPT 353
TTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++ +++ K E T
Sbjct: 242 TTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKT 301
>gi|47217916|emb|CAG06522.1| unnamed protein product [Tetraodon nigroviridis]
Length = 458
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/319 (57%), Positives = 239/319 (74%), Gaps = 2/319 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT+TMY QYW+D R
Sbjct: 11 VKETVDKLLKGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKR 70
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+ LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 71 LAYLGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 130
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ E+ V GV +LPQF+I+ +
Sbjct: 131 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGESAVTGVTRIELPQFSIVDY 190
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
+ R +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 191 KLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 250
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFV VF ALLEYA VNY ++
Sbjct: 251 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLEYAFVNYIFFGRGP 310
Query: 344 KKKPKAKEPTPLGNYIRLC 362
+ + K E N R+
Sbjct: 311 QMQKKLAEKAEKANNERVA 329
>gi|348525972|ref|XP_003450495.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Oreochromis niloticus]
Length = 448
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/305 (59%), Positives = 237/305 (77%), Gaps = 2/305 (0%)
Query: 49 TISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF 108
T+ +LL GYDIRLRP+FGG P+ VGM + IAS DSISEV+MDYTITMY Q W+D RLA+
Sbjct: 7 TVDKLLKGYDIRLRPDFGGPPVVVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAY 66
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
+ LTL A+++W+PDT+F NDK SFLH VT +N+++RL+ DG++ YG+R TTT
Sbjct: 67 GELNLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 126
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETN 226
ACMMDL YPLD QNCT+EIESYGYT D+V +W+ + V GV++ +LPQF+I+ +
Sbjct: 127 ACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWEGGDNAVTGVDKLELPQFSIVATQLV 186
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
++ TG Y RLSLSF+++RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARVALG
Sbjct: 187 SKEVIFTTGAYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALG 246
Query: 287 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKK 346
+TTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++ ++
Sbjct: 247 VTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPAQQ 306
Query: 347 PKAKE 351
K E
Sbjct: 307 KKLSE 311
>gi|345328452|ref|XP_001514286.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Ornithorhynchus anatinus]
Length = 597
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/313 (57%), Positives = 243/313 (77%), Gaps = 2/313 (0%)
Query: 41 ERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQY 100
+ ++ V + + +LL GYD+RLRP+FGG+P+ VGM + I+S D ISEV+MDYTITMY Q
Sbjct: 139 KNISEVKEIVDKLLKGYDVRLRPDFGGNPVTVGMSIHISSIDQISEVNMDYTITMYFQQS 198
Query: 101 WKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITY 160
W+D RLA++ LTL A+++W+PDT+F NDK SFLH VT +N+++RL+ DG++ Y
Sbjct: 199 WRDKRLAYNDIALNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLY 258
Query: 161 GMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQF 218
G+R TTT ACMMDL YPLD QNCT+EIESYGYT+ D+V +W+ ++ V G+E +LPQF
Sbjct: 259 GLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTIDDIVFFWQGNDSAVTGIEVLELPQF 318
Query: 219 TILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEA 278
TI+ R+ TG+Y RLSLSF+++RNIGYF+ QTY+PSILI +LSWVSFWIN++A
Sbjct: 319 TIIEQRLVTREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDA 378
Query: 279 TSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSY 338
++ARVALG+TTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY +
Sbjct: 379 SAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYAFVNYIF 438
Query: 339 WADRAKKKPKAKE 351
+ +++ K E
Sbjct: 439 FGRGPRQQKKQNE 451
>gi|18490267|gb|AAH22449.1| Gamma-aminobutyric acid (GABA) A receptor, beta 1 [Homo sapiens]
gi|123983084|gb|ABM83283.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
gi|123993389|gb|ABM84296.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
gi|123997777|gb|ABM86490.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
gi|124000361|gb|ABM87689.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
gi|124000363|gb|ABM87690.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
Length = 474
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/321 (57%), Positives = 241/321 (75%), Gaps = 2/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSTNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++ VPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLCVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +KK +K+
Sbjct: 324 YAFVNYIFFGKGPQKKGASKQ 344
>gi|344265222|ref|XP_003404684.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Loxodonta africana]
Length = 474
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 246/322 (76%), Gaps = 2/322 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVDDPSNMSLVKETVDKLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLRRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWISYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 321
Query: 330 EYAAVNYSYWADRAKKKPKAKE 351
EYA VNY ++ + + KA E
Sbjct: 322 EYALVNYIFFGRGPQCQKKAAE 343
>gi|395505010|ref|XP_003756839.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Sarcophilus harrisii]
Length = 474
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 245/317 (77%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSANDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|344265224|ref|XP_003404685.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Loxodonta africana]
Length = 516
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 246/322 (76%), Gaps = 2/322 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVDDPSNMSLVKETVDKLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLRRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWI+++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWISYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 321
Query: 330 EYAAVNYSYWADRAKKKPKAKE 351
EYA VNY ++ + + KA E
Sbjct: 322 EYALVNYIFFGRGPQCQKKAAE 343
>gi|410915040|ref|XP_003970995.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Takifugu rubripes]
Length = 525
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/306 (59%), Positives = 241/306 (78%), Gaps = 2/306 (0%)
Query: 43 LANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWK 102
++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY Q W+
Sbjct: 37 MSVVKETVDRLLKGYDIRLRPDFGGPPVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWR 96
Query: 103 DDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
D RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+
Sbjct: 97 DKRLSYSEIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 156
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTI 220
R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV++ +LPQF+I
Sbjct: 157 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVDKIELPQFSI 216
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+ H+ + +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++
Sbjct: 217 VDHKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 276
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 277 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYALVNYIFFG 336
Query: 341 DRAKKK 346
+++
Sbjct: 337 RGPQRQ 342
>gi|269914159|ref|NP_001161733.1| gamma-aminobutyric acid receptor subunit beta-2 precursor
[Monodelphis domestica]
gi|395505008|ref|XP_003756838.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Sarcophilus harrisii]
Length = 512
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 245/317 (77%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSANDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|440913394|gb|ELR62847.1| Gamma-aminobutyric acid receptor subunit beta-2 [Bos grunniens
mutus]
Length = 484
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|348575235|ref|XP_003473395.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Cavia porcellus]
Length = 474
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|149726130|ref|XP_001503453.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Equus caballus]
Length = 474
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|269914161|ref|NP_001161734.1| gamma-aminobutyric acid receptor subunit beta-2 precursor
[Ornithorhynchus anatinus]
Length = 512
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDKLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|73953537|ref|XP_867070.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Canis lupus familiaris]
Length = 474
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|146286184|sp|P0C2W5.1|GBRB2_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
Length = 472
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 20 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 79
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 80 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 139
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 140 LHPDGTVLYGLRITTTTACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 199
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 200 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 259
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 260 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 319
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 320 EYALVNYIFFGRGPQRQ 336
>gi|4503865|ref|NP_000804.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 2 precursor
[Homo sapiens]
gi|114603232|ref|XP_001143967.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pan troglodytes]
gi|114603234|ref|XP_001144033.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Pan troglodytes]
gi|297676569|ref|XP_002816203.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pongo abelii]
gi|297676571|ref|XP_002816204.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pongo abelii]
gi|332238931|ref|XP_003268656.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Nomascus leucogenys]
gi|332238935|ref|XP_003268658.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Nomascus leucogenys]
gi|332238937|ref|XP_003268659.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Nomascus leucogenys]
gi|390459183|ref|XP_002744173.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Callithrix jacchus]
gi|395817132|ref|XP_003782029.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Otolemur garnettii]
gi|397473112|ref|XP_003808064.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Pan paniscus]
gi|397473116|ref|XP_003808066.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pan paniscus]
gi|403287100|ref|XP_003934795.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Saimiri boliviensis boliviensis]
gi|403287102|ref|XP_003934796.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Saimiri boliviensis boliviensis]
gi|426350875|ref|XP_004042989.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Gorilla gorilla gorilla]
gi|426350877|ref|XP_004042990.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Gorilla gorilla gorilla]
gi|455946|gb|AAB29370.1| gamma-aminobutyric acid A receptor beta 2 subunit [Homo sapiens]
gi|957261|gb|AAB33983.1| GABAA receptor beta 2 subunit [Homo sapiens]
gi|71043419|gb|AAH99705.1| GABRB2 protein [Homo sapiens]
gi|71043452|gb|AAH99719.1| GABRB2 protein [Homo sapiens]
gi|85662636|gb|AAI05640.1| GABRB2 protein [Homo sapiens]
gi|119581947|gb|EAW61543.1| gamma-aminobutyric acid (GABA) A receptor, beta 2, isoform CRA_a
[Homo sapiens]
gi|158260653|dbj|BAF82504.1| unnamed protein product [Homo sapiens]
gi|168277470|dbj|BAG10713.1| gamma-aminobutyric-acid receptor subunit beta-2 precursor
[synthetic construct]
gi|262527823|gb|ACY69097.1| gamma-aminobutyric acid A receptor beta 2 isoform 1 [Macaca
mulatta]
gi|380811400|gb|AFE77575.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 2 [Macaca
mulatta]
Length = 474
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|6679909|ref|NP_032096.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Mus
musculus]
gi|6978869|ref|NP_037089.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Rattus
norvegicus]
gi|52000957|sp|P63138.1|GBRB2_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|57798|emb|CAA33494.1| GABA(A) receptor beta-2 preprotein [Rattus sp.]
gi|755157|gb|AAA79974.1| GABA-benzodiazepine receptor beta-2 subunit [Mus musculus]
gi|26355430|dbj|BAC41155.1| unnamed protein product [Mus musculus]
gi|46371157|gb|AAS90347.1| GABA-A receptor beta2 subunit [Rattus norvegicus]
gi|148700397|gb|EDL32344.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|148878001|gb|AAI45974.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|148878377|gb|AAI45976.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|149052307|gb|EDM04124.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Rattus
norvegicus]
gi|1095219|prf||2108275B GABA-A receptor:SUBUNIT=beta2
Length = 474
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|431918110|gb|ELK17338.1| Gamma-aminobutyric acid receptor subunit beta-2 [Pteropus alecto]
Length = 474
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|392583896|ref|NP_001254805.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Ovis
aries]
gi|387158480|gb|AFJ54221.1| gamma-aminobutyric acid A receptor [Ovis aries]
Length = 474
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|291387761|ref|XP_002710400.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, beta 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 476
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|73953551|ref|XP_867140.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
8 [Canis lupus familiaris]
Length = 476
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|301753443|ref|XP_002912563.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 476
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|158260483|dbj|BAF82419.1| unnamed protein product [Homo sapiens]
Length = 474
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/311 (58%), Positives = 241/311 (77%), Gaps = 2/311 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWA 340
EYA VNY ++
Sbjct: 322 EYALVNYIFFG 332
>gi|301753445|ref|XP_002912564.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Ailuropoda melanoleuca]
Length = 474
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|292495011|sp|P63137.2|GBRB2_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|262527825|gb|ACY69098.1| gamma-aminobutyric acid A receptor beta 2 long isoform [Mus
musculus]
Length = 512
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|292620123|ref|XP_002664179.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Danio rerio]
Length = 483
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/316 (58%), Positives = 240/316 (75%), Gaps = 1/316 (0%)
Query: 43 LANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWK 102
++ V T+ +LL GYDIRLRP+FGG P+ VGM + I+S D +SEV+MDYTITMY Q W+
Sbjct: 41 MSYVKVTVDKLLKGYDIRLRPDFGGPPVDVGMSIDISSIDMVSEVNMDYTITMYFQQSWR 100
Query: 103 DDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+
Sbjct: 101 DKRLSYTGIPLNLTLDNRVADQLWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGL 160
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTIL 221
R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV+ +LPQF+I+
Sbjct: 161 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWQGGSSVTGVDNIELPQFSII 220
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
++T +K ATG+Y RLSLSFKL+RNIGYF+ QTY+PS LI +LSWVSFWIN++A++A
Sbjct: 221 DYKTLSKKVVFATGSYPRLSLSFKLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAA 280
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD 341
RVALGITTVLTMTTI+T +R +LP+I YVKAIDIYL+ CFVFVF ALLEYA VNY ++
Sbjct: 281 RVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGR 340
Query: 342 RAKKKPKAKEPTPLGN 357
+ K E N
Sbjct: 341 GPHLQKKVAEKAAKSN 356
>gi|291387759|ref|XP_002710399.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, beta 2-like
isoform 1 [Oryctolagus cuniculus]
Length = 512
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|348575237|ref|XP_003473396.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Cavia porcellus]
Length = 512
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|345799422|ref|XP_003434557.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Canis
lupus familiaris]
Length = 512
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|149726128|ref|XP_001503458.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Equus caballus]
Length = 512
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|350594447|ref|XP_003483903.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Sus
scrofa]
Length = 512
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|296192665|ref|XP_002744170.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Callithrix jacchus]
Length = 512
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|12548785|ref|NP_068711.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 1 precursor
[Homo sapiens]
gi|270047479|ref|NP_001161800.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Macaca
mulatta]
gi|114603228|ref|XP_001143894.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pan troglodytes]
gi|297676567|ref|XP_002816202.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Pongo abelii]
gi|332238939|ref|XP_003268660.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
5 [Nomascus leucogenys]
gi|397473114|ref|XP_003808065.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pan paniscus]
gi|403287104|ref|XP_003934797.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Saimiri boliviensis boliviensis]
gi|426350879|ref|XP_004042991.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Gorilla gorilla gorilla]
gi|292495010|sp|P47870.2|GBRB2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|292630773|sp|D1LYT2.1|GBRB2_MACMU RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|957259|gb|AAB33982.1| GABAA receptor beta 2 subunit [Homo sapiens]
gi|119581948|gb|EAW61544.1| gamma-aminobutyric acid (GABA) A receptor, beta 2, isoform CRA_b
[Homo sapiens]
gi|262527821|gb|ACY69096.1| gamma-aminobutyric acid A receptor beta 2 isoform 2 [Macaca
mulatta]
gi|351696717|gb|EHA99635.1| Gamma-aminobutyric acid receptor subunit beta-2 [Heterocephalus
glaber]
gi|355691818|gb|EHH27003.1| hypothetical protein EGK_17097 [Macaca mulatta]
gi|355750393|gb|EHH54731.1| hypothetical protein EGM_15623 [Macaca fascicularis]
gi|1095323|prf||2108344A GABA-A receptor:SUBUNIT=beta2
Length = 512
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|395817134|ref|XP_003782030.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Otolemur garnettii]
Length = 512
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|301753441|ref|XP_002912562.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Ailuropoda melanoleuca]
gi|281345130|gb|EFB20714.1| hypothetical protein PANDA_000325 [Ailuropoda melanoleuca]
Length = 512
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|449500680|ref|XP_002194324.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Taeniopygia guttata]
Length = 442
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/313 (58%), Positives = 240/313 (76%), Gaps = 6/313 (1%)
Query: 43 LANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWK 102
++ V +T+ +LL GYDIRLRP+FGG P+ VGM + IAS D +SEV+MDYT+TMY Q W+
Sbjct: 1 MSYVKETVDRLLQGYDIRLRPDFGGPPVDVGMRIEIASIDVVSEVNMDYTLTMYFQQSWR 60
Query: 103 DDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
D RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+
Sbjct: 61 DKRLSYSGIPLNLTLDNRVADQLWVPDTYFQNDKKSFVHGVTVKNRMIRLHPDGTVLYGL 120
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTI 220
R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E+ V GV +LPQF+I
Sbjct: 121 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGESAVTGVNNIELPQFSI 180
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+ ++ ++ + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWVSFWIN++A++
Sbjct: 181 VDYKMVSKRVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 240
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLEYA VNY ++
Sbjct: 241 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFG 300
Query: 341 DRAKKKPKAKEPT 353
K P+ ++ T
Sbjct: 301 ----KGPQHQKKT 309
>gi|262527817|gb|ACY69094.1| gamma-aminobutyric acid A receptor beta 2 isoform 4 [Homo sapiens]
Length = 372
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 244/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|148705865|gb|EDL37812.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1, isoform
CRA_a [Mus musculus]
Length = 473
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/321 (57%), Positives = 241/321 (75%), Gaps = 3/321 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C S ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSSNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIE+ GYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIEN-GYTTDDIEFYWNGGEGAVTGV 202
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 203 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 262
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 263 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 322
Query: 331 YAAVNYSYWADRAKKKPKAKE 351
YA VNY ++ +KK +K+
Sbjct: 323 YAFVNYIFFGKGPQKKGASKQ 343
>gi|148277563|ref|NP_001019558.2| gamma-aminobutyric acid A receptor, beta 2 precursor [Danio rerio]
Length = 519
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/316 (57%), Positives = 240/316 (75%), Gaps = 2/316 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + + V T+ +L+ GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 22 CAQSIRDPSNMPVVKDTVDRLMKGYDIRLRPDFGGAPVAVGMNIDIASIDMVSEVNMDYT 81
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q W+D RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 82 LTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 141
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 142 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGV 201
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ ++ + +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 202 ERIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWV 261
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 262 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 321
Query: 331 YAAVNYSYWADRAKKK 346
YA VNY ++ +++
Sbjct: 322 YAFVNYIFFGRGPQRQ 337
>gi|11140020|emb|CAC16086.1| GABAA receptor betaZ2 subunit [Danio rerio]
Length = 519
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/316 (57%), Positives = 240/316 (75%), Gaps = 2/316 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + + V T+ +L+ GYDIRLRP+FGG P+ V M++ IAS D +SEV+MDYT
Sbjct: 22 CAQSIRDPSNMPVVKDTVDRLMKGYDIRLRPDFGGAPVAVRMNIDIASIDMVSEVNMDYT 81
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q W+D RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 82 LTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 141
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 142 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGV 201
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+G++ + +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 202 ERIELPQFSIVGYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWV 261
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 262 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 321
Query: 331 YAAVNYSYWADRAKKK 346
YA VNY ++ +++
Sbjct: 322 YAFVNYIFFGRGPQRQ 337
>gi|550337|emb|CAA51326.1| GABA-A receptor beta 2 subunit [Gallus gallus]
Length = 430
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/317 (56%), Positives = 242/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ + +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|118097255|ref|XP_001232378.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Gallus gallus]
gi|542693|pir||JH0829 gamma-aminobutyric acid A receptor beta 2S chain precursor -
chicken
Length = 474
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/317 (56%), Positives = 242/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ + +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|326928398|ref|XP_003210367.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Meleagris gallopavo]
Length = 474
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/317 (56%), Positives = 242/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ + +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|326928400|ref|XP_003210368.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Meleagris gallopavo]
Length = 491
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/317 (56%), Positives = 242/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ + +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|118097253|ref|XP_414492.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Gallus gallus]
gi|224068159|ref|XP_002193169.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Taeniopygia guttata]
Length = 491
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/317 (56%), Positives = 242/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ + +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 322 EYALVNYIFFGRGPQRQ 338
>gi|363738921|ref|XP_003642096.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Gallus
gallus]
Length = 473
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/317 (56%), Positives = 242/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 21 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 80
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 81 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 140
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 141 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTG 200
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ + +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 201 VTKIELPQFSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 260
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 261 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 320
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 321 EYALVNYIFFGRGPQRQ 337
>gi|410914014|ref|XP_003970483.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Takifugu rubripes]
Length = 526
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/303 (59%), Positives = 239/303 (78%), Gaps = 2/303 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +L+ GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY Q W+D R
Sbjct: 38 VKETVDRLMKGYDIRLRPDFGGAPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKR 97
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
L++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 98 LSYSEIAYNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 157
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV++ +LPQF+I+ +
Sbjct: 158 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGVDKIELPQFSIVDY 217
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
+ + +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 218 KLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 277
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 278 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGQGP 337
Query: 344 KKK 346
+++
Sbjct: 338 QRQ 340
>gi|432878723|ref|XP_004073382.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oryzias latipes]
Length = 526
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/303 (59%), Positives = 238/303 (78%), Gaps = 2/303 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +L+ GYDIRLRP+FGG P+ VGM++ I+S D +SEV+MDYT+TMY Q W+D R
Sbjct: 38 VKETVDRLMKGYDIRLRPDFGGAPVAVGMNIDISSIDMVSEVNMDYTLTMYFQQAWRDKR 97
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
L++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 98 LSYSEIAYNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 157
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ E V GV+ +LPQF+I+ +
Sbjct: 158 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGEGAVSGVDRIELPQFSIVDY 217
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
+ + +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 218 KLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 277
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
ALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 278 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGQGP 337
Query: 344 KKK 346
+++
Sbjct: 338 QRQ 340
>gi|354495036|ref|XP_003509638.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like,
partial [Cricetulus griseus]
Length = 340
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/317 (56%), Positives = 243/317 (76%), Gaps = 2/317 (0%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 3 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 62
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 63 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 122
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 123 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 182
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 183 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 242
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAI +YL+ CFVFVF ALL
Sbjct: 243 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIYMYLMGCFVFVFMALL 302
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 303 EYALVNYIFFGRGPQRQ 319
>gi|291385738|ref|XP_002709463.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Oryctolagus cuniculus]
Length = 482
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/329 (55%), Positives = 241/329 (73%), Gaps = 10/329 (3%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGD--------PLYVGMDLTIASFDSI 84
C + ++ V +T+ +LL GYDIRLRP+FGG+ P+ VGM + +AS D +
Sbjct: 24 CAHSANEPSNMSYVKETVDRLLKGYDIRLRPDFGGNASCFFNLPPVDVGMRIDVASIDMV 83
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
SEV+MDYT+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT
Sbjct: 84 SEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVT 143
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK- 203
+N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT++I SYGYT D+ YW
Sbjct: 144 VKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLKINSYGYTTDDIEFYWNG 203
Query: 204 -ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSI 262
E V GV + +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS
Sbjct: 204 GEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPST 263
Query: 263 LIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 322
LI +LSWVSFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFV
Sbjct: 264 LITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 323
Query: 323 FVFAALLEYAAVNYSYWADRAKKKPKAKE 351
FVF ALLEYA VNY ++ +KK K+
Sbjct: 324 FVFLALLEYAFVNYIFFGKGPQKKGAGKQ 352
>gi|133778333|gb|AAI15079.1| Gabrb2 protein [Danio rerio]
Length = 519
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/316 (56%), Positives = 239/316 (75%), Gaps = 2/316 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + + V T+ +L+ GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT
Sbjct: 22 CAQSIRDPSNMPVVKDTVDRLMKGYDIRLRPDFGGAPVAVGMNIDIASIDMVSEVNMDYT 81
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q W+D RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 82 LTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVPDTYFLNDKRSFVHGVTVKNRMIRL 141
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 142 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGV 201
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+ ++ + +TG+Y RLSLSFKL+RNIGYF+ QTY+PSI I +LSWV
Sbjct: 202 ERIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSIPITILSWV 261
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 262 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 321
Query: 331 YAAVNYSYWADRAKKK 346
YA VNY ++ +++
Sbjct: 322 YAFVNYIFFGRGPQRQ 337
>gi|301607832|ref|XP_002933494.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Xenopus (Silurana) tropicalis]
Length = 477
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/310 (58%), Positives = 235/310 (75%), Gaps = 2/310 (0%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG + VGM + +AS D +SEV+MDYT
Sbjct: 24 CAQSVNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPSVEVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q W+D RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWRDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKRSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW + + GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIKFYWNGGDKAITGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E+ +LPQF+I+ ++ R +TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 EKIELPQFSIIDYKMVSRNVIFSTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYWA 340
YA VNY ++
Sbjct: 324 YAFVNYIFFG 333
>gi|410960768|ref|XP_003986959.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Felis
catus]
Length = 447
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/294 (60%), Positives = 227/294 (77%), Gaps = 2/294 (0%)
Query: 62 RPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDF 121
RP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D RLA+S LTL
Sbjct: 27 RPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRV 86
Query: 122 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDN 181
A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD
Sbjct: 87 ADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDE 146
Query: 182 QNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQR 239
QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H R ATG Y R
Sbjct: 147 QNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPR 206
Query: 240 LSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTG 299
LSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARVALGITTVLTMTTI+T
Sbjct: 207 LSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTH 266
Query: 300 VRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPT 353
+R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++ +++ K E T
Sbjct: 267 LRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKT 320
>gi|345798002|ref|XP_848482.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Canis
lupus familiaris]
Length = 630
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 174/289 (60%), Positives = 222/289 (76%), Gaps = 2/289 (0%)
Query: 67 GDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIW 126
G P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D RLA+S LTL A+++W
Sbjct: 215 GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLW 274
Query: 127 VPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTV 186
VPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+
Sbjct: 275 VPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 334
Query: 187 EIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSF 244
EIESYGYT D+ YW+ + V GVE +LPQF+I+ H R ATG Y RLSLSF
Sbjct: 335 EIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSF 394
Query: 245 KLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSL 304
+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARVALGITTVLTMTTI+T +R +L
Sbjct: 395 RLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETL 454
Query: 305 PRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPT 353
P+I YVKAID+YL+ CFVFVF ALLEYA VNY ++ +++ K E T
Sbjct: 455 PKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKT 503
>gi|2736068|gb|AAB94045.1| gamma-aminobutyric acid receptor beta subunit [Takifugu rubripes]
Length = 453
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 172/295 (58%), Positives = 225/295 (76%), Gaps = 2/295 (0%)
Query: 69 PLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVP 128
P+ VGM + IAS DSISEV+MDYTITMY Q W+D RLA+ LTL A+++W+P
Sbjct: 2 PVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYGELKLNLTLDNRVADQLWLP 61
Query: 129 DTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEI 188
DT+F NDK SFLH VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EI
Sbjct: 62 DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI 121
Query: 189 ESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKL 246
ESYGYT D+V +W+ +T V GV++ +LPQF+I+G R+ + TG+Y RLSLSF++
Sbjct: 122 ESYGYTTDDIVFFWQGGDTAVTGVDKLELPQFSIVGIRLVSREVRFTTGSYPRLSLSFRI 181
Query: 247 QRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPR 306
+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARVALG+TTVLTMTTI+T +R +LP+
Sbjct: 182 KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPK 241
Query: 307 ISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPTPLGNYIRL 361
I YVKAID+YL+ CFVFVF ALLEYA VNY ++ ++ K E N R+
Sbjct: 242 IPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPAQQKKLSERVGKSNNERM 296
>gi|348535498|ref|XP_003455237.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oreochromis niloticus]
Length = 555
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 177/332 (53%), Positives = 235/332 (70%), Gaps = 31/332 (9%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASF------------------------ 81
V +T+ +L+ GYDIRLRP+FGG PL V DL I+ F
Sbjct: 38 VKETVDRLMKGYDIRLRPDFGGAPLAVRSDLEISCFSSSSNFKLRAGNANKKIKNRIMAL 97
Query: 82 -----DSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDK 136
DSI ++ +DYT+TMY Q W+D RL++S LTL A+++WVPDT+F NDK
Sbjct: 98 PVHTSDSILKMDLDYTLTMYFQQAWRDKRLSYSEIAYNLTLDNRVADQLWVPDTYFLNDK 157
Query: 137 NSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVL 196
SF+H VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT
Sbjct: 158 KSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTD 217
Query: 197 DVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFV 254
D+ YW+ + V GV+ +LPQF+I+ ++ + +TG+Y RLSLSFKL+RNIGYF+
Sbjct: 218 DIEFYWRGGDGAVSGVDRIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFI 277
Query: 255 FQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID 314
QTY+PSILI +LSWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID
Sbjct: 278 LQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAID 337
Query: 315 IYLVMCFVFVFAALLEYAAVNYSYWADRAKKK 346
+YL+ CFVFVF ALLEYA VNY ++ +++
Sbjct: 338 MYLMGCFVFVFLALLEYAFVNYIFFGQGPQRQ 369
>gi|297292529|ref|XP_001099985.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Macaca mulatta]
Length = 405
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 221/290 (76%), Gaps = 2/290 (0%)
Query: 64 NFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAE 123
+ G P+ VGM + +AS D +SEV+MDYT+TMY Q WKD RL++S LTL A+
Sbjct: 5 SLAGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVAD 64
Query: 124 KIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQN 183
++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QN
Sbjct: 65 QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQN 124
Query: 184 CTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLS 241
CT+EIESYGYT D+ YW E V GV + +LPQF+I+ ++ +K + TG Y RLS
Sbjct: 125 CTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLS 184
Query: 242 LSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVR 301
LSF+L+RNIGYF+ QTY+PS LI +LSWVSFWIN++A++ARVALGITTVLTMTTIST +R
Sbjct: 185 LSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLR 244
Query: 302 SSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKE 351
+LP+I YVKAIDIYL+ CFVFVF ALLEYA VNY ++ +KK +K+
Sbjct: 245 ETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGASKQ 294
>gi|297292527|ref|XP_002804095.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Macaca mulatta]
Length = 422
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 221/290 (76%), Gaps = 2/290 (0%)
Query: 64 NFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAE 123
+ G P+ VGM + +AS D +SEV+MDYT+TMY Q WKD RL++S LTL A+
Sbjct: 5 SLAGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVAD 64
Query: 124 KIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQN 183
++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QN
Sbjct: 65 QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQN 124
Query: 184 CTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLS 241
CT+EIESYGYT D+ YW E V GV + +LPQF+I+ ++ +K + TG Y RLS
Sbjct: 125 CTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLS 184
Query: 242 LSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVR 301
LSF+L+RNIGYF+ QTY+PS LI +LSWVSFWIN++A++ARVALGITTVLTMTTIST +R
Sbjct: 185 LSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLR 244
Query: 302 SSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKE 351
+LP+I YVKAIDIYL+ CFVFVF ALLEYA VNY ++ +KK +K+
Sbjct: 245 ETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGASKQ 294
>gi|449275751|gb|EMC84519.1| Gamma-aminobutyric acid receptor subunit beta-3, partial [Columba
livia]
Length = 422
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 174/300 (58%), Positives = 225/300 (75%), Gaps = 5/300 (1%)
Query: 67 GDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIW 126
G P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D RLA++ LTL A+++W
Sbjct: 1 GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLNLTLDNRVADQLW 60
Query: 127 VPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTV 186
VPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+
Sbjct: 61 VPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 120
Query: 187 EIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATG---TYQRLS 241
EIESYGYT D+ YW+ + V GVE +LPQF+I+ + + ATG Y RLS
Sbjct: 121 EIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSIVEYRLVSKNVVFATGKYCAYPRLS 180
Query: 242 LSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVR 301
LSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARVALGITTVLTMTTI+T +R
Sbjct: 181 LSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLR 240
Query: 302 SSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPTPLGNYIRL 361
+LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++ +++ K E T N RL
Sbjct: 241 ETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGKGPQRQKKLAEKTAKANNDRL 300
>gi|119578058|gb|EAW57654.1| gamma-aminobutyric acid (GABA) A receptor, beta 3, isoform CRA_b
[Homo sapiens]
Length = 409
Score = 360 bits (924), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 170/282 (60%), Positives = 217/282 (76%), Gaps = 2/282 (0%)
Query: 74 MDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFA 133
M++ IAS D +SEV+MDYT+TMY QYW+D RLA+S LTL A+++WVPDT+F
Sbjct: 1 MNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFL 60
Query: 134 NDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGY 193
NDK SF+H VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGY
Sbjct: 61 NDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGY 120
Query: 194 TVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIG 251
T D+ YW+ + V GVE +LPQF+I+ H R ATG Y RLSLSF+L+RNIG
Sbjct: 121 TTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIG 180
Query: 252 YFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVK 311
YF+ QTY+PSILI +LSWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVK
Sbjct: 181 YFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVK 240
Query: 312 AIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPT 353
AID+YL+ CFVFVF ALLEYA VNY ++ +++ K E T
Sbjct: 241 AIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKT 282
>gi|260822689|ref|XP_002606734.1| hypothetical protein BRAFLDRAFT_226027 [Branchiostoma floridae]
gi|229292078|gb|EEN62744.1| hypothetical protein BRAFLDRAFT_226027 [Branchiostoma floridae]
Length = 439
Score = 359 bits (922), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 214/302 (70%), Gaps = 4/302 (1%)
Query: 54 LHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDE 113
+ GYD RP FGG PL V M L++AS D +SEV MDYT+T++L +YW+D+RL FS +
Sbjct: 4 VRGYDRNFRPGFGGPPLLVDMSLSVASIDRVSEVDMDYTLTIFLREYWRDERLHFSETNR 63
Query: 114 VLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMD 173
L+L G E++WVPDTF N K+SFLH VT N+L+RL DG + YG+R T AC MD
Sbjct: 64 SLSLDGRLVERLWVPDTFLVNAKSSFLHKVTVDNRLLRLFPDGRLLYGLRITAKAACPMD 123
Query: 174 LHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEK 231
L YPLD Q C ++ ESYGYT D+ WK+ + G+E +L QF + HE +D +K
Sbjct: 124 LRKYPLDVQTCPLQFESYGYTTEDIRFKWKDGNESIHGLERIELAQFWVGEHEVSDEVQK 183
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG Y RL++ FKL RNI YF+ QTYLP+ L+V+LSWVSFWINHEA ARVALGITTVL
Sbjct: 184 YETGEYPRLTIRFKLYRNIMYFILQTYLPATLLVVLSWVSFWINHEAVPARVALGITTVL 243
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SYWADRAKKKPKA 349
TMTT T R SLP+ISY+KAID+Y VMCF+FVFAALLEYAAVNY S R +K KA
Sbjct: 244 TMTTFITSARDSLPKISYIKAIDVYCVMCFLFVFAALLEYAAVNYHSSVRQRREQKALKA 303
Query: 350 KE 351
K+
Sbjct: 304 KQ 305
>gi|300795409|ref|NP_001179689.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Bos
taurus]
Length = 519
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 172/324 (53%), Positives = 236/324 (72%), Gaps = 9/324 (2%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPN-------FGGDPLYVGMDLTIASFDSI 84
+C + ++ V +T+ ++ G+ R F G P+ VGM++ IAS D +
Sbjct: 22 VCAQSVNDPSNMSLVKETVGRIRKGFHARSSEKSRGWSFWFSGPPVAVGMNIDIASIDMV 81
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
SEV+MDYT+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT
Sbjct: 82 SEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVT 141
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK- 203
+N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+
Sbjct: 142 VKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRG 201
Query: 204 -ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSI 262
+ V GV + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSI
Sbjct: 202 DDNAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSI 261
Query: 263 LIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 322
LI +LSWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFV
Sbjct: 262 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 321
Query: 323 FVFAALLEYAAVNYSYWADRAKKK 346
FVF ALLEYA VNY ++ +++
Sbjct: 322 FVFMALLEYALVNYIFFGRGPQRQ 345
>gi|296485095|tpg|DAA27210.1| TPA: gamma-aminobutyric acid (GABA) A receptor, beta 2 isoform 2
[Bos taurus]
Length = 481
Score = 357 bits (917), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 171/324 (52%), Positives = 235/324 (72%), Gaps = 9/324 (2%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPN-------FGGDPLYVGMDLTIASFDSI 84
+C + ++ V + + ++ G+ R F G P+ VGM++ IAS D +
Sbjct: 22 VCAQSVNDPSNMSLVKERVGRIRKGFHARSSEKSRGWSFWFSGPPVAVGMNIDIASIDMV 81
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
SEV+MDYT+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT
Sbjct: 82 SEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVT 141
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK- 203
+N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+
Sbjct: 142 VKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRG 201
Query: 204 -ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSI 262
+ V GV + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSI
Sbjct: 202 DDNAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSI 261
Query: 263 LIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 322
LI +LSWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFV
Sbjct: 262 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 321
Query: 323 FVFAALLEYAAVNYSYWADRAKKK 346
FVF ALLEYA VNY ++ +++
Sbjct: 322 FVFMALLEYALVNYIFFGRGPQRQ 345
>gi|296485094|tpg|DAA27209.1| TPA: gamma-aminobutyric acid (GABA) A receptor, beta 2 isoform 1
[Bos taurus]
Length = 519
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 171/324 (52%), Positives = 235/324 (72%), Gaps = 9/324 (2%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPN-------FGGDPLYVGMDLTIASFDSI 84
+C + ++ V + + ++ G+ R F G P+ VGM++ IAS D +
Sbjct: 22 VCAQSVNDPSNMSLVKERVGRIRKGFHARSSEKSRGWSFWFSGPPVAVGMNIDIASIDMV 81
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
SEV+MDYT+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT
Sbjct: 82 SEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVT 141
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK- 203
+N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+
Sbjct: 142 VKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRG 201
Query: 204 -ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSI 262
+ V GV + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSI
Sbjct: 202 DDNAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSI 261
Query: 263 LIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 322
LI +LSWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFV
Sbjct: 262 LITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 321
Query: 323 FVFAALLEYAAVNYSYWADRAKKK 346
FVF ALLEYA VNY ++ +++
Sbjct: 322 FVFMALLEYALVNYIFFGRGPQRQ 345
>gi|260822687|ref|XP_002606733.1| hypothetical protein BRAFLDRAFT_82373 [Branchiostoma floridae]
gi|229292077|gb|EEN62743.1| hypothetical protein BRAFLDRAFT_82373 [Branchiostoma floridae]
Length = 466
Score = 357 bits (915), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 171/296 (57%), Positives = 211/296 (71%), Gaps = 2/296 (0%)
Query: 43 LANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWK 102
L + IS LL GYD RPNFG + L + M +T+AS DS+SEV +DYTIT+ L Q+WK
Sbjct: 40 LYEASPNISCLLEGYDRNFRPNFGKEALVINMSMTVASIDSVSEVDLDYTITILLRQFWK 99
Query: 103 DDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
D RLA+ + L+L G E +WVPDTF N K +FLH VT N+L+RL DG + YGM
Sbjct: 100 DQRLAYRGMNRSLSLDGRLVEALWVPDTFLLNSKEAFLHRVTVDNRLIRLFPDGELIYGM 159
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTI 220
R T+ LAC MDL YPLD Q CT+E+ESYGYT D++ WK + +++ L QF++
Sbjct: 160 RITSVLACKMDLRKYPLDEQTCTLELESYGYTKEDLIFTWKNGNKSIHNLDKIDLSQFSL 219
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
H T + TGTY RL LSFKL RN+ +F+ QTY+PSIL+V+ SWVSFWINHEA
Sbjct: 220 GDHNTMTAESVYETGTYPRLVLSFKLHRNVFFFLLQTYVPSILLVISSWVSFWINHEAVP 279
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALGITTVLTMTT T R+SLPRISY+KA+D+YLVMCFVFVFAALLEYA VN+
Sbjct: 280 ARVALGITTVLTMTTFITSARASLPRISYIKAVDVYLVMCFVFVFAALLEYAFVNF 335
>gi|90076504|dbj|BAE87932.1| unnamed protein product [Macaca fascicularis]
Length = 341
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 168/287 (58%), Positives = 218/287 (75%), Gaps = 2/287 (0%)
Query: 67 GDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIW 126
G P +G + +AS D +SEV+MDYT+TMY Q WKD RL++S LTL A+++W
Sbjct: 11 GPPWTLGCRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLW 70
Query: 127 VPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTV 186
VPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+
Sbjct: 71 VPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTL 130
Query: 187 EIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSF 244
EIESYGYT D+ YW E V GV + +LPQF+I+ ++ +K + TG Y RLSLSF
Sbjct: 131 EIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSF 190
Query: 245 KLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSL 304
+L+RNIGYF+ QTY+PS LI +LSW+SFWIN++A++ARVALGITTVLTMTTIST +R +L
Sbjct: 191 RLKRNIGYFILQTYMPSTLITILSWMSFWINYDASAARVALGITTVLTMTTISTHLRETL 250
Query: 305 PRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKE 351
P+I YVKAIDIYL+ CFVFVF ALLEYA VNY ++ +KK +K+
Sbjct: 251 PKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGASKQ 297
>gi|345779693|ref|XP_003431881.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Canis
lupus familiaris]
Length = 663
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 165/282 (58%), Positives = 214/282 (75%), Gaps = 2/282 (0%)
Query: 72 VGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTF 131
VG+ + ++ ISE+ MDYT+TMY Q WKD RL++S LTL A+++WVPDT+
Sbjct: 251 VGVKVRVSQLQLISEIEMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTY 310
Query: 132 FANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY 191
F NDK SF+H VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESY
Sbjct: 311 FLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESY 370
Query: 192 GYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRN 249
GYT D+ YW E V GV + +LPQF+I+ ++ +K + TG Y RLSLSF+L+RN
Sbjct: 371 GYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRN 430
Query: 250 IGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISY 309
IGYF+ QTY+PS LI +LSWVSFWIN++A++ARVALGITTVLTMTTIST +R +LP+I Y
Sbjct: 431 IGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPY 490
Query: 310 VKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKE 351
VKAIDIYL+ CFVFVF ALLEYA VNY ++ +KK +K+
Sbjct: 491 VKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGASKQ 532
>gi|338713090|ref|XP_003362822.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Equus
caballus]
Length = 411
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 162/275 (58%), Positives = 216/275 (78%), Gaps = 2/275 (0%)
Query: 74 MDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFA 133
M++ IAS D +SEV+MDYT+TMY Q W+D RL+++ LTL A+++WVPDT+F
Sbjct: 1 MNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFL 60
Query: 134 NDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGY 193
NDK SF+H VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGY
Sbjct: 61 NDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGY 120
Query: 194 TVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIG 251
T D+ YW+ + V GV + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIG
Sbjct: 121 TTDDIEFYWRGDDNAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIG 180
Query: 252 YFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVK 311
YF+ QTY+PSILI +LSWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVK
Sbjct: 181 YFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVK 240
Query: 312 AIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKK 346
AID+YL+ CFVFVF ALLEYA VNY ++ +++
Sbjct: 241 AIDMYLMGCFVFVFMALLEYALVNYIFFGRGPQRQ 275
>gi|348571661|ref|XP_003471614.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Cavia porcellus]
Length = 416
Score = 347 bits (889), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 163/278 (58%), Positives = 214/278 (76%), Gaps = 2/278 (0%)
Query: 76 LTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFAND 135
+ I + D++SE+++DYT+TMY Q WKD RL++S LTL A+++WVPDT+F ND
Sbjct: 9 MKITATDNLSELNIDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLND 68
Query: 136 KNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTV 195
K SF+H VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT
Sbjct: 69 KKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTT 128
Query: 196 LDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYF 253
D+ YW E V GV + +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF
Sbjct: 129 DDIEFYWNGGEKAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYF 188
Query: 254 VFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAI 313
+ QTY+PS LI +LSWVSFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAI
Sbjct: 189 ILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAI 248
Query: 314 DIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKE 351
DIYL+ CFVFVF ALLEYA VNY ++ +KK +K+
Sbjct: 249 DIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGASKQ 286
>gi|262527819|gb|ACY69095.1| gamma-aminobutyric acid A receptor beta 2 isoform 3 [Homo sapiens]
Length = 313
Score = 346 bits (888), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 162/275 (58%), Positives = 216/275 (78%), Gaps = 2/275 (0%)
Query: 74 MDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFA 133
M++ IAS D +SEV+MDYT+TMY Q W+D RL+++ LTL A+++WVPDT+F
Sbjct: 1 MNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFL 60
Query: 134 NDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGY 193
NDK SF+H VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGY
Sbjct: 61 NDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGY 120
Query: 194 TVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIG 251
T D+ YW+ + V GV + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIG
Sbjct: 121 TTDDIEFYWRGDDNAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIG 180
Query: 252 YFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVK 311
YF+ QTY+PSILI +LSWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVK
Sbjct: 181 YFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVK 240
Query: 312 AIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKK 346
AID+YL+ CFVFVF ALLEYA VNY ++ +++
Sbjct: 241 AIDMYLMGCFVFVFMALLEYALVNYIFFGRGPQRQ 275
>gi|348552646|ref|XP_003462138.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Cavia porcellus]
Length = 421
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 163/269 (60%), Positives = 206/269 (76%), Gaps = 2/269 (0%)
Query: 87 VSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTER 146
VS DYT+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +
Sbjct: 26 VSGDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVK 85
Query: 147 NKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--E 204
N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ +
Sbjct: 86 NRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGD 145
Query: 205 TPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILI 264
V GVE +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI
Sbjct: 146 KAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILI 205
Query: 265 VMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFV 324
+LSWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFV
Sbjct: 206 TILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFV 265
Query: 325 FAALLEYAAVNYSYWADRAKKKPKAKEPT 353
F ALLEYA VNY ++ +++ K E T
Sbjct: 266 FLALLEYAFVNYIFFGRGPQRQKKLAEKT 294
>gi|403306399|ref|XP_003943724.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Saimiri boliviensis boliviensis]
Length = 413
Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 169/286 (59%), Positives = 213/286 (74%), Gaps = 6/286 (2%)
Query: 74 MDLT--IASFDSISEVSM--DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPD 129
M LT I SF S E + DYT+TMY QYW+D RLA+S LTL A+++WVPD
Sbjct: 1 MQLTWLIDSFFSFQEFGIQNDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPD 60
Query: 130 TFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIE 189
T+F NDK SF+H VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIE
Sbjct: 61 TYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE 120
Query: 190 SYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQ 247
SYGYT D+ YW+ + V GVE +LPQF+I+ H R ATG Y RLSLSF+L+
Sbjct: 121 SYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLK 180
Query: 248 RNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRI 307
RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I
Sbjct: 181 RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKI 240
Query: 308 SYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPT 353
YVKAID+YL+ CFVFVF ALLEYA VNY ++ +++ K E T
Sbjct: 241 PYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAEKT 286
>gi|198420848|ref|XP_002119693.1| PREDICTED: similar to gamma-aminobutyric acid (GABA) A receptor,
beta 3 [Ciona intestinalis]
Length = 499
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 179/314 (57%), Positives = 229/314 (72%), Gaps = 3/314 (0%)
Query: 39 TTERLANVTQTISQLLH-GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYL 97
+ ER A + T+ +LL YDIRLRP +G DPL VGM + +AS DS+SEV+MDYT+T+
Sbjct: 20 SNERQAIIKSTLDRLLEEDYDIRLRPQYGADPLSVGMSIQVASIDSVSEVNMDYTLTLNF 79
Query: 98 NQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGS 157
Q W+D+RLAF + LTL +KIWVPDT+F NDK S++H VT NK++R+ DG+
Sbjct: 80 QQSWRDERLAFDGLNLNLTLDNRVVDKIWVPDTYFVNDKKSYIHTVTRSNKMLRIEEDGT 139
Query: 158 ITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLP 216
I YG+R TT LACMM+L YP+D QNCT+EIESYGYT D+ + + V GVE +L
Sbjct: 140 IFYGLRVTTDLACMMNLRRYPMDEQNCTLEIESYGYTTDDIRFHMLGDIGVTGVENLKLA 199
Query: 217 QFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 276
QF + + ATG+Y R+SLSF L+RNIG+F+ QTYLP LI +LSWVSFWINH
Sbjct: 200 QFKVTNSRLLIKNITFATGSYPRVSLSFLLKRNIGFFILQTYLPCSLITILSWVSFWINH 259
Query: 277 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
EAT+ARVALGITTVLT+TTIST VR SLP+I +KA+D+YL+ CFVFVF ALLEYA VN
Sbjct: 260 EATAARVALGITTVLTVTTISTNVRQSLPKIPDIKALDVYLICCFVFVFLALLEYAMVNC 319
Query: 337 SYWADRAKKKPKAK 350
+Y+ + A++ KAK
Sbjct: 320 TYYGNMARQT-KAK 332
>gi|355692545|gb|EHH27148.1| hypothetical protein EGK_17280, partial [Macaca mulatta]
gi|355777888|gb|EHH62924.1| hypothetical protein EGM_15786, partial [Macaca fascicularis]
Length = 394
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 161/266 (60%), Positives = 204/266 (76%), Gaps = 2/266 (0%)
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYT+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N++
Sbjct: 2 DYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRM 61
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V
Sbjct: 62 IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAV 121
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GVE +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +L
Sbjct: 122 TGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITIL 181
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF A
Sbjct: 182 SWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLA 241
Query: 328 LLEYAAVNYSYWADRAKKKPKAKEPT 353
LLEYA VNY ++ +++ K E T
Sbjct: 242 LLEYAFVNYIFFGRGPQRQKKLAEKT 267
>gi|332256201|ref|XP_003277206.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Nomascus leucogenys]
Length = 402
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 161/266 (60%), Positives = 204/266 (76%), Gaps = 2/266 (0%)
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYT+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N++
Sbjct: 10 DYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRM 69
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V
Sbjct: 70 IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAV 129
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GVE +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +L
Sbjct: 130 TGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITIL 189
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF A
Sbjct: 190 SWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLA 249
Query: 328 LLEYAAVNYSYWADRAKKKPKAKEPT 353
LLEYA VNY ++ +++ K E T
Sbjct: 250 LLEYAFVNYIFFGRGPQRQKKLAEKT 275
>gi|300797181|ref|NP_001178250.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 4 [Homo
sapiens]
gi|119578059|gb|EAW57655.1| gamma-aminobutyric acid (GABA) A receptor, beta 3, isoform CRA_c
[Homo sapiens]
Length = 402
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 161/266 (60%), Positives = 204/266 (76%), Gaps = 2/266 (0%)
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYT+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N++
Sbjct: 10 DYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRM 69
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V
Sbjct: 70 IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAV 129
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GVE +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +L
Sbjct: 130 TGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITIL 189
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF A
Sbjct: 190 SWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLA 249
Query: 328 LLEYAAVNYSYWADRAKKKPKAKEPT 353
LLEYA VNY ++ +++ K E T
Sbjct: 250 LLEYAFVNYIFFGRGPQRQKKLAEKT 275
>gi|332843341|ref|XP_003314620.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Pan troglodytes]
gi|397515749|ref|XP_003828108.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Pan paniscus]
gi|410305768|gb|JAA31484.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [Pan troglodytes]
Length = 402
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 161/266 (60%), Positives = 204/266 (76%), Gaps = 2/266 (0%)
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYT+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N++
Sbjct: 10 DYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRM 69
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V
Sbjct: 70 IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAV 129
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GVE +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +L
Sbjct: 130 TGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITIL 189
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF A
Sbjct: 190 SWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLA 249
Query: 328 LLEYAAVNYSYWADRAKKKPKAKEPT 353
LLEYA VNY ++ +++ K E T
Sbjct: 250 LLEYAFVNYIFFGRGPQRQKKLAEKT 275
>gi|327268132|ref|XP_003218852.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Anolis carolinensis]
Length = 413
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 160/270 (59%), Positives = 206/270 (76%), Gaps = 2/270 (0%)
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYT+TMY QYW+D RLA++ LTL A+++WVPDT+F NDK SF+H VT +N++
Sbjct: 24 DYTLTMYFQQYWRDKRLAYAGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRM 83
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V
Sbjct: 84 IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAV 143
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GVE +LPQF+I+ ++ R ATG Y RLSLSFKL+RNIGYF+ QTY+PSILI +L
Sbjct: 144 TGVERIELPQFSIVEYKLVSRNVVFATGAYPRLSLSFKLKRNIGYFILQTYMPSILITIL 203
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF A
Sbjct: 204 SWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLA 263
Query: 328 LLEYAAVNYSYWADRAKKKPKAKEPTPLGN 357
LLEYA VNY ++ +++ + E T N
Sbjct: 264 LLEYAFVNYIFFGKGPQRQKRLAEKTAKAN 293
>gi|390340438|ref|XP_783809.3| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Strongylocentrotus purpuratus]
Length = 509
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 158/268 (58%), Positives = 209/268 (77%), Gaps = 2/268 (0%)
Query: 84 ISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+S + DYT+TMY Q+WKD+RL++ ++LSG AE+IWVPDT+F NDK SF+HDV
Sbjct: 88 VSALISDYTLTMYFRQHWKDERLSYDPCLGNVSLSGILAERIWVPDTYFPNDKRSFVHDV 147
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R + DG+ITYGMR T+ +C MDL +YP+D QNC++EIESYGYT DV W+
Sbjct: 148 TVTNKLLRFHHDGTITYGMRITSVASCYMDLVHYPMDEQNCSLEIESYGYTTADVNFVWQ 207
Query: 204 --ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
+ + GV ++ QFT+ ++ + + +TG+Y RL+L+F+++RN+G+F QTYLPS
Sbjct: 208 YGDDSLEGVNNIEMAQFTLSDYKLIVKMQNFSTGSYPRLALTFRIKRNVGFFFLQTYLPS 267
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
IL+VMLSWVSFWINHEATSARV+LGITTVLTMTTIST VR SLPRISYVK+IDIY++ C+
Sbjct: 268 ILLVMLSWVSFWINHEATSARVSLGITTVLTMTTISTAVRQSLPRISYVKSIDIYVITCY 327
Query: 322 VFVFAALLEYAAVNYSYWADRAKKKPKA 349
FVFAAL+EYA VNY+YW ++ KK +A
Sbjct: 328 SFVFAALVEYAIVNYNYWLEQKKKVKEA 355
>gi|440910237|gb|ELR60053.1| Gamma-aminobutyric acid receptor subunit beta-3, partial [Bos
grunniens mutus]
Length = 393
Score = 340 bits (872), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 160/264 (60%), Positives = 203/264 (76%), Gaps = 2/264 (0%)
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYT+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N++
Sbjct: 2 DYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRM 61
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V
Sbjct: 62 IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAV 121
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GVE +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +L
Sbjct: 122 TGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITIL 181
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF A
Sbjct: 182 SWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLA 241
Query: 328 LLEYAAVNYSYWADRAKKKPKAKE 351
LLEYA VNY ++ +++ K E
Sbjct: 242 LLEYAFVNYIFFGRGPQRQKKLAE 265
>gi|326913724|ref|XP_003203184.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Meleagris gallopavo]
Length = 455
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 159/270 (58%), Positives = 205/270 (75%), Gaps = 2/270 (0%)
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYT+TMY QYW+D RLA++ LTL A+++WVPDT+F NDK SF+H VT +N++
Sbjct: 60 DYTLTMYFQQYWRDKRLAYAGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRM 119
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V
Sbjct: 120 IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAV 179
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GVE +LPQF+I+ + + ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +L
Sbjct: 180 TGVERIELPQFSIVEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITIL 239
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF A
Sbjct: 240 SWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLA 299
Query: 328 LLEYAAVNYSYWADRAKKKPKAKEPTPLGN 357
LLEYA VNY ++ +++ K E T N
Sbjct: 300 LLEYAFVNYIFFGKGPQRQKKLAEKTAKAN 329
>gi|432118042|gb|ELK37979.1| Gamma-aminobutyric acid receptor subunit beta-3, partial [Myotis
davidii]
Length = 383
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 159/261 (60%), Positives = 202/261 (77%), Gaps = 2/261 (0%)
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYT+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N++
Sbjct: 2 DYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRM 61
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V
Sbjct: 62 IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAV 121
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GVE +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +L
Sbjct: 122 TGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITIL 181
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF A
Sbjct: 182 SWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLA 241
Query: 328 LLEYAAVNYSYWADRAKKKPK 348
LLEYA VNY ++ +++ K
Sbjct: 242 LLEYAFVNYIFFGRGPQRQKK 262
>gi|449266634|gb|EMC77674.1| Gamma-aminobutyric acid receptor subunit beta-4 [Columba livia]
Length = 410
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 158/273 (57%), Positives = 208/273 (76%), Gaps = 2/273 (0%)
Query: 87 VSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTER 146
+S DYTITMY Q W+D RLA++ LTL A+++W+PDT+F NDK SFLH VT +
Sbjct: 3 ISQDYTITMYFQQSWRDKRLAYNDLPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVK 62
Query: 147 NKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--E 204
N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYTV D+V +W+ +
Sbjct: 63 NRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGND 122
Query: 205 TPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILI 264
+ V G+E +LPQFTI+ R+ TG+Y RLSLSF+++RNIGYF+ QTY+PSILI
Sbjct: 123 SAVTGMEVLELPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILI 182
Query: 265 VMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFV 324
+LSWVSFWIN++A++ARVALG+TTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFV
Sbjct: 183 TILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFV 242
Query: 325 FAALLEYAAVNYSYWADRAKKKPKAKEPTPLGN 357
F ALLEYA VNY ++ +++ K E N
Sbjct: 243 FLALLEYAFVNYIFFGRGPRQQKKQSERISKAN 275
>gi|410949391|ref|XP_003981406.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Felis
catus]
Length = 487
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 167/317 (52%), Positives = 222/317 (70%), Gaps = 27/317 (8%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+ I R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADXI-------------------------R 116
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 117 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 176
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 177 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 236
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 237 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 296
Query: 330 EYAAVNYSYWADRAKKK 346
EYA VNY ++ +++
Sbjct: 297 EYALVNYIFFGRGPQRQ 313
>gi|297673422|ref|XP_002814764.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Pongo abelii]
gi|397490149|ref|XP_003816070.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Pan paniscus]
Length = 404
Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 160/271 (59%), Positives = 205/271 (75%), Gaps = 2/271 (0%)
Query: 83 SISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHD 142
+ S DYT+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H
Sbjct: 4 ACGRTSEDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHG 63
Query: 143 VTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW 202
VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW
Sbjct: 64 VTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYW 123
Query: 203 K--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V GV + +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+P
Sbjct: 124 NGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMP 183
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S LI +LSWVSFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ C
Sbjct: 184 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 243
Query: 321 FVFVFAALLEYAAVNYSYWADRAKKKPKAKE 351
FVFVF ALLEYA VNY ++ +KK +K+
Sbjct: 244 FVFVFLALLEYAFVNYIFFGKGPQKKGASKQ 274
>gi|403284708|ref|XP_003933700.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Saimiri boliviensis boliviensis]
Length = 404
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 160/271 (59%), Positives = 204/271 (75%), Gaps = 2/271 (0%)
Query: 83 SISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHD 142
+ S DYT+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H
Sbjct: 4 ACGRTSEDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHG 63
Query: 143 VTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW 202
VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW
Sbjct: 64 VTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYW 123
Query: 203 K--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V GV + +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+P
Sbjct: 124 NGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMP 183
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S LI +LSWVSFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ C
Sbjct: 184 STLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGC 243
Query: 321 FVFVFAALLEYAAVNYSYWADRAKKKPKAKE 351
FVFVF ALLEYA VNY ++ +KK K+
Sbjct: 244 FVFVFLALLEYAFVNYIFFGKGPQKKGAGKQ 274
>gi|221040640|dbj|BAH11997.1| unnamed protein product [Homo sapiens]
Length = 402
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 160/266 (60%), Positives = 203/266 (76%), Gaps = 2/266 (0%)
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYT+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N++
Sbjct: 10 DYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRM 69
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ Y + + V
Sbjct: 70 IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYRRGGDKAV 129
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GVE +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +L
Sbjct: 130 TGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITIL 189
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF A
Sbjct: 190 SWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLA 249
Query: 328 LLEYAAVNYSYWADRAKKKPKAKEPT 353
LLEYA VNY ++ +++ K E T
Sbjct: 250 LLEYAFVNYIFFGRGPQRQKKLAEKT 275
>gi|410957680|ref|XP_003985453.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Felis catus]
Length = 406
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 159/264 (60%), Positives = 203/264 (76%), Gaps = 2/264 (0%)
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYT+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N++
Sbjct: 11 DYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRM 70
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V
Sbjct: 71 IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAV 130
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GV + +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +L
Sbjct: 131 TGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITIL 190
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF A
Sbjct: 191 SWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLA 250
Query: 328 LLEYAAVNYSYWADRAKKKPKAKE 351
LLEYA VNY ++ +KK +K+
Sbjct: 251 LLEYAFVNYIFFGKGPQKKGASKQ 274
>gi|426344254|ref|XP_004038689.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Gorilla
gorilla gorilla]
Length = 404
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 159/264 (60%), Positives = 203/264 (76%), Gaps = 2/264 (0%)
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYT+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N++
Sbjct: 11 DYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRM 70
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V
Sbjct: 71 IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAV 130
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GV + +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +L
Sbjct: 131 TGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITIL 190
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF A
Sbjct: 191 SWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLA 250
Query: 328 LLEYAAVNYSYWADRAKKKPKAKE 351
LLEYA VNY ++ +KK +K+
Sbjct: 251 LLEYAFVNYIFFGKGPQKKGASKQ 274
>gi|351701085|gb|EHB04004.1| Gamma-aminobutyric acid receptor subunit beta-3 [Heterocephalus
glaber]
Length = 501
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 158/261 (60%), Positives = 200/261 (76%), Gaps = 2/261 (0%)
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHP 60
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEE 212
DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ +T V GVE
Sbjct: 61 DGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDTAVTGVER 120
Query: 213 AQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSF 272
+LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSF
Sbjct: 121 IELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSF 180
Query: 273 WINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 332
WIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA
Sbjct: 181 WINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYA 240
Query: 333 AVNYSYWADRAKKKPKAKEPT 353
VNY ++ +++ K E T
Sbjct: 241 FVNYIFFGRGPQRQKKLAEKT 261
>gi|326919230|ref|XP_003205885.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Meleagris gallopavo]
Length = 473
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 156/262 (59%), Positives = 203/262 (77%), Gaps = 1/262 (0%)
Query: 89 MDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNK 148
+DYT+TMY Q W+D RL++S LTL A+++WVPDT+F NDK SF+H VT +N+
Sbjct: 80 LDYTLTMYFQQSWRDKRLSYSGIPLNLTLDNRVADQLWVPDTYFQNDKKSFVHGVTVKNR 139
Query: 149 LVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPV 207
++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E+ V
Sbjct: 140 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGESAV 199
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GV +LPQF+I+ ++ ++ + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +L
Sbjct: 200 TGVSNIELPQFSIIDYKMVSKRVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITIL 259
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF A
Sbjct: 260 SWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLA 319
Query: 328 LLEYAAVNYSYWADRAKKKPKA 349
LLEYA VNY ++ +++ KA
Sbjct: 320 LLEYAFVNYIFFGKGPQRQKKA 341
>gi|194374465|dbj|BAG57128.1| unnamed protein product [Homo sapiens]
Length = 404
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 159/271 (58%), Positives = 204/271 (75%), Gaps = 2/271 (0%)
Query: 83 SISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHD 142
+ S DYT+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H
Sbjct: 4 ACGRTSEDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHG 63
Query: 143 VTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW 202
VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW
Sbjct: 64 VTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYW 123
Query: 203 K--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V GV + +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+P
Sbjct: 124 NGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMP 183
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S LI +LSWVSFWIN++A++ARVALGITTV TMTTIST +R +LP+I YVKAIDIYL+ C
Sbjct: 184 STLITILSWVSFWINYDASAARVALGITTVHTMTTISTHLRETLPKIPYVKAIDIYLMGC 243
Query: 321 FVFVFAALLEYAAVNYSYWADRAKKKPKAKE 351
FVFVF ALLEYA VNY ++ +KK +K+
Sbjct: 244 FVFVFLALLEYAFVNYIFFGKGPQKKGASKQ 274
>gi|332843344|ref|XP_003339315.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Pan
troglodytes]
gi|332843346|ref|XP_003314621.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
4 [Pan troglodytes]
gi|397515751|ref|XP_003828109.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Pan paniscus]
Length = 388
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 157/261 (60%), Positives = 199/261 (76%), Gaps = 2/261 (0%)
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHP 60
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEE 212
DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE
Sbjct: 61 DGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVER 120
Query: 213 AQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSF 272
+LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSF
Sbjct: 121 IELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSF 180
Query: 273 WINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 332
WIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA
Sbjct: 181 WINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYA 240
Query: 333 AVNYSYWADRAKKKPKAKEPT 353
VNY ++ +++ K E T
Sbjct: 241 FVNYIFFGRGPQRQKKLAEKT 261
>gi|431917312|gb|ELK16845.1| Gamma-aminobutyric acid receptor subunit beta-3 [Pteropus alecto]
Length = 386
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 157/261 (60%), Positives = 199/261 (76%), Gaps = 2/261 (0%)
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHP 60
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEE 212
DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE
Sbjct: 61 DGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVER 120
Query: 213 AQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSF 272
+LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSF
Sbjct: 121 IELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSF 180
Query: 273 WINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 332
WIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA
Sbjct: 181 WINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYA 240
Query: 333 AVNYSYWADRAKKKPKAKEPT 353
VNY ++ +++ K E T
Sbjct: 241 FVNYIFFGRGPQRQKKLAEKT 261
>gi|332256203|ref|XP_003277207.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Nomascus leucogenys]
gi|332256205|ref|XP_003277208.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Nomascus leucogenys]
Length = 388
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 157/261 (60%), Positives = 199/261 (76%), Gaps = 2/261 (0%)
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHP 60
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEE 212
DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE
Sbjct: 61 DGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVER 120
Query: 213 AQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSF 272
+LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSF
Sbjct: 121 IELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSF 180
Query: 273 WINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 332
WIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA
Sbjct: 181 WINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYA 240
Query: 333 AVNYSYWADRAKKKPKAKEPT 353
VNY ++ +++ K E T
Sbjct: 241 FVNYIFFGRGPQRQKKLAEKT 261
>gi|300797159|ref|NP_001178249.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 3 [Homo
sapiens]
Length = 388
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 157/261 (60%), Positives = 199/261 (76%), Gaps = 2/261 (0%)
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHP 60
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEE 212
DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE
Sbjct: 61 DGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVER 120
Query: 213 AQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSF 272
+LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSF
Sbjct: 121 IELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSF 180
Query: 273 WINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 332
WIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA
Sbjct: 181 WINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYA 240
Query: 333 AVNYSYWADRAKKKPKAKEPT 353
VNY ++ +++ K E T
Sbjct: 241 FVNYIFFGRGPQRQKKLAEKT 261
>gi|426378388|ref|XP_004055909.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
4 [Gorilla gorilla gorilla]
gi|426378390|ref|XP_004055910.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
5 [Gorilla gorilla gorilla]
Length = 388
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 157/261 (60%), Positives = 199/261 (76%), Gaps = 2/261 (0%)
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHP 60
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEE 212
DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE
Sbjct: 61 DGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVER 120
Query: 213 AQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSF 272
+LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSF
Sbjct: 121 IELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSF 180
Query: 273 WINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 332
WIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA
Sbjct: 181 WINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYA 240
Query: 333 AVNYSYWADRAKKKPKAKEPT 353
VNY ++ +++ K E T
Sbjct: 241 FVNYIFFGRGPQRQKKLAEKT 261
>gi|390464123|ref|XP_002806936.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Callithrix jacchus]
gi|390464125|ref|XP_003733172.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Callithrix jacchus]
Length = 388
Score = 333 bits (854), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 157/261 (60%), Positives = 199/261 (76%), Gaps = 2/261 (0%)
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHP 60
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEE 212
DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE
Sbjct: 61 DGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVER 120
Query: 213 AQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSF 272
+LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSF
Sbjct: 121 IELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSF 180
Query: 273 WINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 332
WIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA
Sbjct: 181 WINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYA 240
Query: 333 AVNYSYWADRAKKKPKAKEPT 353
VNY ++ +++ K E T
Sbjct: 241 FVNYIFFGRGPQRQKKLAEKT 261
>gi|449273441|gb|EMC82935.1| Gamma-aminobutyric acid receptor subunit beta-1, partial [Columba
livia]
Length = 397
Score = 333 bits (853), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 156/266 (58%), Positives = 203/266 (76%), Gaps = 2/266 (0%)
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYT+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N++
Sbjct: 1 DYTLTMYFQQSWRDKRLSYAGIPLNLTLDNRVADQLWVPDTYFQNDKKSFVHGVTVKNRM 60
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E+ V
Sbjct: 61 IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGESAV 120
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GV +LPQF+I+ ++ ++ + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +L
Sbjct: 121 TGVNNIELPQFSIVDYKMVSKRVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITIL 180
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVALGITTVLTMTTIST +R +LP+I YVKAIDIYL+ CFVFVF A
Sbjct: 181 SWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLA 240
Query: 328 LLEYAAVNYSYWADRAKKKPKAKEPT 353
LLEYA VNY ++ +++ KA T
Sbjct: 241 LLEYAFVNYIFFGKGPQRQKKAAGRT 266
>gi|403306401|ref|XP_003943725.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Saimiri boliviensis boliviensis]
Length = 388
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 157/261 (60%), Positives = 199/261 (76%), Gaps = 2/261 (0%)
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHP 60
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEE 212
DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE
Sbjct: 61 DGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVER 120
Query: 213 AQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSF 272
+LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSF
Sbjct: 121 IELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSF 180
Query: 273 WINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 332
WIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA
Sbjct: 181 WINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYA 240
Query: 333 AVNYSYWADRAKKKPKAKEPT 353
VNY ++ +++ K E T
Sbjct: 241 FVNYIFFGRGPQRQKKLAEKT 261
>gi|426248009|ref|XP_004017758.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Ovis
aries]
Length = 387
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 156/259 (60%), Positives = 198/259 (76%), Gaps = 2/259 (0%)
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHP 60
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEE 212
DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE
Sbjct: 61 DGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVER 120
Query: 213 AQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSF 272
+LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSF
Sbjct: 121 IELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSF 180
Query: 273 WINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 332
WIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA
Sbjct: 181 WINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYA 240
Query: 333 AVNYSYWADRAKKKPKAKE 351
VNY ++ +++ K E
Sbjct: 241 FVNYIFFGRGPQRQKKLAE 259
>gi|221044268|dbj|BAH13811.1| unnamed protein product [Homo sapiens]
Length = 388
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 156/261 (59%), Positives = 198/261 (75%), Gaps = 2/261 (0%)
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MY QYW+D R A+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+
Sbjct: 1 MYFQQYWRDKRHAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHP 60
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEE 212
DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE
Sbjct: 61 DGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVER 120
Query: 213 AQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSF 272
+LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSF
Sbjct: 121 IELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSF 180
Query: 273 WINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 332
WIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA
Sbjct: 181 WINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYA 240
Query: 333 AVNYSYWADRAKKKPKAKEPT 353
VNY ++ +++ K E T
Sbjct: 241 FVNYIFFGRGPQRQKKLAEKT 261
>gi|393909960|gb|EFO21538.2| hypothetical protein LOAG_06953 [Loa loa]
Length = 376
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/291 (58%), Positives = 210/291 (72%), Gaps = 38/291 (13%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-- 114
YDIRLRP FGGD L + +D+TI S D+ISEV+MDYTITMYL+QYW+D+RL++S +
Sbjct: 19 YDIRLRPGFGGDALLLTLDITIDSIDAISEVNMDYTITMYLHQYWRDERLSWSQHFHIND 78
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
+TLSGDF++ IWVPDTF ANDK SFLHDVTE+NK++R+ DG ITYGMRFTTTLAC M+L
Sbjct: 79 MTLSGDFSQHIWVPDTFLANDKQSFLHDVTEKNKMIRIEYDGQITYGMRFTTTLACHMNL 138
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDRKEKLA 233
YPLDNQNCTVEIESYGYT +V+M W + + GVE+ +PQF ILG++T +R +
Sbjct: 139 RNYPLDNQNCTVEIESYGYTTSEVLMRWNQPDAIFGVEKVDVPQFQILGYQTLNRIVRTT 198
Query: 234 TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTM 293
TG YQRLSL+F +R + G TTVLTM
Sbjct: 199 TGAYQRLSLAFHFKR-----------------------------------SAGTTTVLTM 223
Query: 294 TTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAK 344
TTIS GVR SLPRISYVK+ID+YLV+CF+FVFAALLEYAAVNYS++ ++K
Sbjct: 224 TTISAGVRQSLPRISYVKSIDVYLVVCFMFVFAALLEYAAVNYSHYGGQSK 274
>gi|449499157|ref|XP_002186823.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Taeniopygia guttata]
Length = 400
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/265 (57%), Positives = 201/265 (75%), Gaps = 2/265 (0%)
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MY Q W+D RLA++ LTL A+++W+PDT+F NDK SFLH VT +N+++RL+
Sbjct: 1 MYFQQSWRDKRLAYNDLPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLHP 60
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEE 212
DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYTV D+V +W+ ++ V G+E
Sbjct: 61 DGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGMEV 120
Query: 213 AQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSF 272
+LPQFTI+ R+ TG+Y RLSLSF+++RNIGYF+ QTY+PSILI +LSWVSF
Sbjct: 121 LELPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSF 180
Query: 273 WINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 332
WIN++A++ARVALG+TTVLTMTTI+T +R +LP+I YVKAID+YL+ CFVFVF ALLEYA
Sbjct: 181 WINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEYA 240
Query: 333 AVNYSYWADRAKKKPKAKEPTPLGN 357
VNY ++ +++ K E N
Sbjct: 241 FVNYIFFGRGPRQQKKQSERVSKAN 265
>gi|260822683|ref|XP_002606731.1| hypothetical protein BRAFLDRAFT_82371 [Branchiostoma floridae]
gi|229292075|gb|EEN62741.1| hypothetical protein BRAFLDRAFT_82371 [Branchiostoma floridae]
Length = 449
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 155/304 (50%), Positives = 204/304 (67%), Gaps = 4/304 (1%)
Query: 50 ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
+ + L Y+ LRP FGG PL V M L + S D IS V +D+TI + L QYWKD+RLAF+
Sbjct: 57 MKKKLVNYNRNLRPGFGGPPLLVRMSLDVVSIDHISAVDLDFTICILLRQYWKDERLAFT 116
Query: 110 SEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLA 169
+E ++L G E +WVPDTFF N K SFLH+VT N+L+RL DGSI YG R T
Sbjct: 117 GTNESISLDGRLVEYLWVPDTFFPNSKFSFLHNVTMANRLLRLWPDGSIVYGQRVTVIAE 176
Query: 170 CMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETND 227
C MDL YPLD QNC++ +ESYGYT D++ W + VRG++ Q+ QFT+ H+T +
Sbjct: 177 CNMDLRKYPLDKQNCSLHLESYGYTTEDMIYKWLKGDESVRGLQNLQVAQFTVKNHQTKE 236
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
TG Y ++ SF+L R + Y Q Y+PS L+VM+SWVSFWIN ++ ARV+LGI
Sbjct: 237 MIATYETGAYPHVAFSFRLTREVAYIFLQMYVPSTLLVMISWVSFWINKDSPPARVSLGI 296
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKP 347
TTVL TT T R+SLP+ISY+KA+D+YL+MCF FVFAAL EYA V++ + R K+K
Sbjct: 297 TTVLAQTTFVTSARASLPKISYIKAVDVYLLMCFFFVFAALGEYAVVSFE--STRRKRKA 354
Query: 348 KAKE 351
+E
Sbjct: 355 AKRE 358
>gi|344243736|gb|EGV99839.1| Gamma-aminobutyric acid receptor subunit beta-2 [Cricetulus
griseus]
Length = 338
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/259 (58%), Positives = 202/259 (77%), Gaps = 2/259 (0%)
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYT+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N++
Sbjct: 33 DYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRM 92
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V
Sbjct: 93 IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAV 152
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GV + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +L
Sbjct: 153 TGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITIL 212
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAI +YL+ CFVFVF A
Sbjct: 213 SWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIYMYLMGCFVFVFMA 272
Query: 328 LLEYAAVNYSYWADRAKKK 346
LLEYA VNY ++ +++
Sbjct: 273 LLEYALVNYIFFGRGPQRQ 291
>gi|260822685|ref|XP_002606732.1| hypothetical protein BRAFLDRAFT_226026 [Branchiostoma floridae]
gi|229292076|gb|EEN62742.1| hypothetical protein BRAFLDRAFT_226026 [Branchiostoma floridae]
Length = 447
Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 161/320 (50%), Positives = 214/320 (66%), Gaps = 8/320 (2%)
Query: 43 LANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWK 102
+A +++++L YD +RPNFGG P+ VG+ ++IAS DSISEV++DYTIT+ L Q+WK
Sbjct: 1 IAAADSSLAEVLKNYDRNIRPNFGGPPVRVGLTMSIASIDSISEVNLDYTITVLLRQFWK 60
Query: 103 DDRLA---FSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSIT 159
D RLA +++ ++L G AE +WVPDTF N K +F+H VT N L+RL DGS+
Sbjct: 61 DPRLAQPWLANKTRPMSLDGRLAEDLWVPDTFLTNAKEAFMHTVTTDNVLIRLYPDGSVI 120
Query: 160 YGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQ--L 215
YGMR T C M+L YPLD QNCT+E ESYGYT D+ +YW + + G++ +
Sbjct: 121 YGMRITAVAHCYMNLRKYPLDEQNCTLEFESYGYTTEDLQLYWMRGDESISGLQSVNEDM 180
Query: 216 PQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWIN 275
F + + T +R TG Y RL SF L R I +F+ QTY P+ LIVM+SWV FWI+
Sbjct: 181 QTFQVGAYLTAERVAHYETGDYPRLIFSFNLIRLIPFFLLQTYFPAALIVMMSWVGFWIS 240
Query: 276 HEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVN 335
+ ARV+LGITTVLTMTT T R+S+PRISYVKAID+YL++CF+F F AL+EYA VN
Sbjct: 241 PYSEPARVSLGITTVLTMTTFITSARASVPRISYVKAIDVYLIICFLFSFGALIEYAIVN 300
Query: 336 YSYWADRAKKKPKAKEPTPL 355
Y+ R KK+ K TPL
Sbjct: 301 YTTLV-RQKKETKRIPLTPL 319
>gi|391339617|ref|XP_003744144.1| PREDICTED: uncharacterized protein LOC100906164 [Metaseiulus
occidentalis]
Length = 1203
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 152/317 (47%), Positives = 211/317 (66%), Gaps = 7/317 (2%)
Query: 27 SEKLRLC--HKKSATTERLANVTQTISQLL-HGYDIRLRPNFGGDPLYVGMDLTIASFDS 83
+ +LRL K + TER N+T ++ GYD R+RPN+GG P+ VG+ + I S +
Sbjct: 27 AHRLRLEGERKTAPQTERGQNITHILNSFFTKGYDKRVRPNYGGPPVKVGVSMQIVSISA 86
Query: 84 ISEVSMDYTITMYLNQYWKDDRLAFSSEDEV--LTLSGDFAEKIWVPDTFFANDKNSFLH 141
+SEV MD+T Y Q W+D+RL+F +E+ +T+ + A KIWVPDTFFAN+K ++ H
Sbjct: 87 VSEVQMDFTSDFYFRQSWRDERLSFPRTNELSQMTVGAEVAGKIWVPDTFFANEKTAYFH 146
Query: 142 DVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMY 201
T N +R+ DG + +R T T +C MDL Y+P+D Q+CT+EIES+GYT+ D+
Sbjct: 147 IATTPNTFLRIGSDGDVYRSIRLTVTASCPMDLRYFPMDRQSCTIEIESFGYTMSDIRYS 206
Query: 202 WKE--TPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYL 259
W++ V EE QLPQF I GH + L+TG Y RL + R++GY++ Q Y+
Sbjct: 207 WRDGAKSVGISEEVQLPQFKIQGHVQKASEISLSTGNYSRLICEIRFVRSMGYYLIQIYV 266
Query: 260 PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM 319
P+ LIV++SWVSFW++ AT ARVALG+ TVLTMTT+ + S LP+ISYVK+ID+YL
Sbjct: 267 PAGLIVVISWVSFWLHRNATPARVALGVMTVLTMTTLMSSTNSQLPKISYVKSIDVYLGT 326
Query: 320 CFVFVFAALLEYAAVNY 336
CFV VFA+LLEYAAV Y
Sbjct: 327 CFVMVFASLLEYAAVGY 343
>gi|260803217|ref|XP_002596487.1| hypothetical protein BRAFLDRAFT_243656 [Branchiostoma floridae]
gi|229281744|gb|EEN52499.1| hypothetical protein BRAFLDRAFT_243656 [Branchiostoma floridae]
Length = 307
Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 152/307 (49%), Positives = 212/307 (69%), Gaps = 4/307 (1%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
+T I +LLH YD+R+RPNF G P+ VG+ + + S DSIS+V+M+YT++ + Q+W D+R
Sbjct: 1 MTLAIERLLHHYDLRIRPNFRGAPVKVGVVIDVISIDSISDVNMEYTVSYDIRQFWVDER 60
Query: 106 LAFSS--EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
L F + + +T G+ +IW PDTF N + S HDVT +L+ + +GS+ Y +R
Sbjct: 61 LDFRHLYDGDKMTFEGETTLRIWRPDTFIKNGRGSRFHDVTIGQQLMHIFKNGSVIYKLR 120
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTIL 221
TTT +C M +H YPLD QNCT++ E+YGYT D+V YW VRG E +LP F +
Sbjct: 121 LTTTASCWMKMHMYPLDAQNCTLQFETYGYTTEDLVYYWLWGFESVRGFENVELPHFDLG 180
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G++T++ + TG + L++SF ++RN+GYF+ +TYLPS L+V +SWVSFWI+ +A++A
Sbjct: 181 GYDTHETAAQYTTGQFSGLAVSFVIRRNMGYFISETYLPSCLVVAVSWVSFWISPDASAA 240
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD 341
RV LGI TVLTMT + VR LP+ISYVKAID+YLV C +FVF ALLEYAAVNY Y
Sbjct: 241 RVLLGIMTVLTMTNLDATVRQGLPKISYVKAIDVYLVGCLIFVFGALLEYAAVNYHYHTA 300
Query: 342 RAKKKPK 348
KK+ K
Sbjct: 301 TMKKRKK 307
>gi|256682097|gb|ACV07675.1| mutant GABA gated chloride channel [Rhipicephalus microplus]
Length = 537
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 146/306 (47%), Positives = 208/306 (67%), Gaps = 5/306 (1%)
Query: 36 KSATTERLANVTQTISQLL-HGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTIT 94
+ T+R N+TQ ++ GYD R+RPN+GG P+ VG+ + I S ++SEV MD+T
Sbjct: 33 RPGQTQRGQNITQILNAFFTRGYDRRVRPNYGGVPVEVGVTMQIISISTVSEVQMDFTSD 92
Query: 95 MYLNQYWKDDRLAF--SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
Y Q W+D+RL+F S + E +T+ + AE+IWVPDTFFAN+K+++ H T N +R+
Sbjct: 93 FYFRQSWRDERLSFQKSPDLESMTVGAEVAERIWVPDTFFANEKSAYFHAATTPNTFLRI 152
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGV 210
G + +R T T +C MDL Y+P+D Q CT+EIES+GYT+ D+ W + T VR
Sbjct: 153 GSGGEVFRSIRLTVTASCPMDLRYFPMDRQACTIEIESFGYTMKDIRYRWSDGDTSVRIA 212
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+E +LPQF +LGH ++ L TG Y RL + R++GY++ Q Y+P+ LIV++SWV
Sbjct: 213 KEVELPQFKVLGHVQKAKEVALTTGNYSRLVCEIRFARSMGYYLIQIYIPAGLIVVISWV 272
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFW++ A+ ARVALG+ TVLTMTT+ + ++LP+ISYVK+ID+YL CFV VF ALLE
Sbjct: 273 SFWLHRNASPARVALGVLTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFTALLE 332
Query: 331 YAAVNY 336
YAAV Y
Sbjct: 333 YAAVGY 338
>gi|345807337|ref|XP_549345.3| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Canis
lupus familiaris]
Length = 631
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 139/297 (46%), Positives = 215/297 (72%), Gaps = 2/297 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V + + ++L YD+RLRPNFGG P+ VG+ + ++S + ISE++MDYTITM+ +Q WKD R
Sbjct: 59 VHKILDRVLSNYDVRLRPNFGGAPVPVGVSMYVSSIEQISEMTMDYTITMFFHQTWKDPR 118
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+ D LTL EK+WVPD +F N K++F+HDVT N++ +L+ DG++ YGMR T
Sbjct: 119 LAYHETDLNLTLDYRMLEKLWVPDCYFLNSKDAFVHDVTVENRVFQLHPDGTVRYGMRLT 178
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT AC +DL +PLD Q C +E+ESYGYTV D+V+YW+ ++G E+ +PQF+ LG
Sbjct: 179 TTAACSLDLQKFPLDKQTCKLEVESYGYTVEDIVLYWEGNGNAIQGTEKLHIPQFSFLGK 238
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
+ ++ TG+Y RL L F +QR + ++ Q Y P++L ++SW+SFW+N+E+++ARV
Sbjct: 239 TMSSKEVFFYTGSYVRLILRFLVQREVTSYLVQIYWPTVLTTVVSWISFWMNYESSAARV 298
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
+G+T++L + I++ +R LP+++ +KAIDIY+V+CF+FVF +LLEY +NY Y++
Sbjct: 299 TVGLTSMLILNAINSHLRDKLPQVACIKAIDIYMVVCFLFVFLSLLEYVYINYLYYS 355
>gi|332218471|ref|XP_003258378.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Nomascus
leucogenys]
Length = 490
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 157/305 (51%), Positives = 212/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 89 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSM 148
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 149 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTSDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 208
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 209 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 268
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+H A ARV+LGITTVLT
Sbjct: 269 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGITTVLT 328
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
MTTI TGV +S+PR+SYVKA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 329 MTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 388
Query: 352 PTPLG 356
P G
Sbjct: 389 PCMCG 393
>gi|194035313|ref|XP_001927040.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Sus
scrofa]
Length = 462
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 163/349 (46%), Positives = 226/349 (64%), Gaps = 11/349 (3%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYV 72
ES++ E + K S +R ++T++ QLL +D +RP FGG + V
Sbjct: 23 ESRVHWQKREVPEMSKKGSPILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPV 82
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTF 131
G+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD F
Sbjct: 83 GVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMF 142
Query: 132 FANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY 191
F + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY
Sbjct: 143 FVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESY 202
Query: 192 GYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQR 248
YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F L+R
Sbjct: 203 AYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRR 262
Query: 249 NIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS 308
+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+S
Sbjct: 263 HIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVS 322
Query: 309 YVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
Y+KA+DIYL + FVFVF ++LEYAAVNY + +R ++KP+ K P G
Sbjct: 323 YIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKPQEKLPCTCG 371
>gi|391325188|ref|XP_003737121.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-like [Metaseiulus occidentalis]
Length = 563
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 146/330 (44%), Positives = 220/330 (66%), Gaps = 6/330 (1%)
Query: 36 KSATTERLANVTQTISQLL-HGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTIT 94
+ T+R N+T ++ GYD R+RPN+GG+P+ VG+ + I S ++SEV MD+T
Sbjct: 47 RPGQTQRGQNITHILNAFFTKGYDKRVRPNYGGNPVEVGVSMQIVSISTVSEVQMDFTSD 106
Query: 95 MYLNQYWKDDRLAFSSEDEV--LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
Y Q W+D+RL+F +++ +T+ + A KIWVPDTFFAN+K ++ H T N +R+
Sbjct: 107 FYFRQAWRDERLSFVKSNDLDQMTVGAEVANKIWVPDTFFANEKTAYFHVATTPNTFLRI 166
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR-GV- 210
+ +G + +R T T +C MDL ++P+D Q+CT+E+ES+GYT+ D+ WK+ P+ G+
Sbjct: 167 SSEGEVYRSIRLTVTASCPMDLRFFPMDRQSCTIEVESFGYTMSDIRYKWKDGPISIGIS 226
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+E +LPQF +LGH + L+TG Y RL + R++GY++ Q Y+P+ LIV++SWV
Sbjct: 227 KEVELPQFKVLGHVQKISEVSLSTGNYSRLICEVRFVRSMGYYLIQIYIPASLIVVISWV 286
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFW++ AT ARV+LG+ TVLTMTT+ + S LP+ISYVK+ID++L CFV VFA+LLE
Sbjct: 287 SFWLHRNATPARVSLGVMTVLTMTTLMSSTNSQLPKISYVKSIDVFLGTCFVMVFASLLE 346
Query: 331 YAAVNYSYWADRAKKKPKAKEPTPLGNYIR 360
YAAV Y A +K +A++ L R
Sbjct: 347 YAAVGY-LGKRVAMRKSRAQQLAKLAEQAR 375
>gi|348563381|ref|XP_003467486.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Cavia porcellus]
Length = 488
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 154/305 (50%), Positives = 213/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF S+ ++ +
Sbjct: 89 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSM 148
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y MR T T C MD
Sbjct: 149 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 208
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 209 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 268
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L R+I +F+ QTY P+ L+VMLSWVSFWI+H+A ARV+LGITTVLT
Sbjct: 269 STGWYNRLYINFTLHRHIFFFLLQTYFPATLMVMLSWVSFWIDHKAVPARVSLGITTVLT 328
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 329 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLRDKF 388
Query: 352 PTPLG 356
P G
Sbjct: 389 PCVCG 393
>gi|351715095|gb|EHB18014.1| Gamma-aminobutyric acid receptor subunit rho-2 [Heterocephalus
glaber]
Length = 491
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 157/308 (50%), Positives = 211/308 (68%), Gaps = 11/308 (3%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 90 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSTSNKSM 149
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++RL DG + Y MR T T C MD
Sbjct: 150 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRLFPDGHVLYSMRITVTAMCNMDFS 209
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 210 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 269
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L R+I +F+ QTY P+ L+VMLSWVSFWI+H+A ARV+LGITTVLT
Sbjct: 270 STGWYNRLYINFTLHRHIFFFLLQTYFPATLMVMLSWVSFWIDHKAVPARVSLGITTVLT 329
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY----SYWADRAKKKPK 348
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY W +R K +
Sbjct: 330 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQEWKER---KLR 386
Query: 349 AKEPTPLG 356
K P G
Sbjct: 387 EKFPCMCG 394
>gi|395857170|ref|XP_003800979.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Otolemur
garnettii]
Length = 649
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 138/297 (46%), Positives = 211/297 (71%), Gaps = 2/297 (0%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V + + ++L GYD+RLRPNFGG P+ V + + ++ + ISE+ MDYTITM+ +Q WKD R
Sbjct: 61 VQKILDRVLSGYDVRLRPNFGGAPVPVRISMYVSHIEQISEIDMDYTITMFFHQTWKDPR 120
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+ D LTL EK+WVPD +F N K++F+HDVT N++ +L+ DG++ YG+R T
Sbjct: 121 LAYYETDLNLTLDYRMHEKLWVPDCYFLNSKDAFVHDVTVENRVFQLHPDGTVRYGIRLT 180
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
T AC +DL +PLD Q C +E+ESYGYTV D+++ W+ ++ + EE +PQFT LG
Sbjct: 181 ATAACTLDLRKFPLDKQTCKLEVESYGYTVEDILLSWEDNDSAIHMTEELHIPQFTFLGR 240
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
++ TG+Y RL L F++QR++ ++ Q Y P++L +LSW+SFW+N+++++ARV
Sbjct: 241 TITSKEVYFYTGSYMRLILKFQIQRDVNSYLVQVYWPTVLTTILSWISFWMNYDSSAARV 300
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
+G+T++L +TTI + +R LP ISYVKAIDIY+++C FVF +LLEY +NY +++
Sbjct: 301 TIGLTSMLILTTIDSHLRDKLPHISYVKAIDIYILVCLFFVFLSLLEYVYINYLFFS 357
>gi|406035350|ref|NP_002034.3| gamma-aminobutyric acid receptor subunit rho-2 precursor [Homo
sapiens]
gi|410516956|sp|P28476.5|GBRR2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit rho-2;
AltName: Full=GABA(A) receptor subunit rho-2; AltName:
Full=GABA(C) receptor; Flags: Precursor
gi|123093748|gb|AAI30355.1| Gamma-aminobutyric acid (GABA) receptor, rho 2 [Homo sapiens]
gi|123093914|gb|AAI30353.1| Gamma-aminobutyric acid (GABA) receptor, rho 2 [Homo sapiens]
gi|313883414|gb|ADR83193.1| Unknown protein [synthetic construct]
Length = 465
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/305 (51%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 64 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSM 123
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 124 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 183
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 184 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 243
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 244 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 303
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
MTTI TGV +S+PR+SYVKA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 304 MTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 363
Query: 352 PTPLG 356
P G
Sbjct: 364 PCMCG 368
>gi|119568942|gb|EAW48557.1| gamma-aminobutyric acid (GABA) receptor, rho 2 [Homo sapiens]
Length = 465
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/305 (51%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 64 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSM 123
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 124 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 183
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 184 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 243
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 244 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 303
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
MTTI TGV +S+PR+SYVKA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 304 MTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 363
Query: 352 PTPLG 356
P G
Sbjct: 364 PCMCG 368
>gi|109072025|ref|XP_001095576.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 isoform 2
[Macaca mulatta]
Length = 465
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/305 (51%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 64 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSM 123
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 124 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 183
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 184 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 243
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 244 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 303
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
MTTI TGV +S+PR+SYVKA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 304 MTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 363
Query: 352 PTPLG 356
P G
Sbjct: 364 PGMCG 368
>gi|426353982|ref|XP_004044451.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-2 [Gorilla gorilla gorilla]
Length = 499
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/305 (51%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 89 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSM 148
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 149 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 208
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 209 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 268
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 269 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 328
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
MTTI TGV +S+PR+SYVKA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 329 MTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 388
Query: 352 PTPLG 356
P G
Sbjct: 389 PCMCG 393
>gi|402867640|ref|XP_003897949.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 isoform 2
[Papio anubis]
Length = 465
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/305 (51%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 64 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSM 123
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 124 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 183
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 184 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 243
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 244 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 303
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
MTTI TGV +S+PR+SYVKA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 304 MTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 363
Query: 352 PTPLG 356
P G
Sbjct: 364 PGMCG 368
>gi|296198773|ref|XP_002746862.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2
[Callithrix jacchus]
Length = 490
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/305 (51%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 89 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSM 148
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 149 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 208
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 209 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 268
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 269 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 328
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
MTTI TGV +S+PR+SYVKA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 329 MTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 388
Query: 352 PTPLG 356
P G
Sbjct: 389 PCMCG 393
>gi|332824532|ref|XP_527448.3| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Pan
troglodytes]
Length = 490
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/305 (51%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 89 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSM 148
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 149 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 208
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 209 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 268
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 269 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 328
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
MTTI TGV +S+PR+SYVKA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 329 MTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 388
Query: 352 PTPLG 356
P G
Sbjct: 389 PCMCG 393
>gi|397504702|ref|XP_003822922.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Pan
paniscus]
Length = 490
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/305 (51%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 89 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSM 148
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 149 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 208
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 209 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 268
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 269 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 328
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
MTTI TGV +S+PR+SYVKA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 329 MTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 388
Query: 352 PTPLG 356
P G
Sbjct: 389 PCMCG 393
>gi|297291324|ref|XP_001095465.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 isoform 1
[Macaca mulatta]
Length = 490
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/305 (51%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 89 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSM 148
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 149 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 208
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 209 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 268
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 269 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 328
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
MTTI TGV +S+PR+SYVKA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 329 MTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 388
Query: 352 PTPLG 356
P G
Sbjct: 389 PGMCG 393
>gi|355561902|gb|EHH18534.1| hypothetical protein EGK_15160 [Macaca mulatta]
Length = 490
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/305 (51%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 89 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSM 148
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 149 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 208
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 209 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 268
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 269 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 328
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
MTTI TGV +S+PR+SYVKA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 329 MTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 388
Query: 352 PTPLG 356
P G
Sbjct: 389 PGMCG 393
>gi|260822691|ref|XP_002606735.1| hypothetical protein BRAFLDRAFT_226124 [Branchiostoma floridae]
gi|229292079|gb|EEN62745.1| hypothetical protein BRAFLDRAFT_226124 [Branchiostoma floridae]
Length = 421
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/288 (55%), Positives = 203/288 (70%), Gaps = 4/288 (1%)
Query: 67 GDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIW 126
G P+ V M +TIAS D ISEV +DYTIT++L QYW DDRL F + L+L G EK+W
Sbjct: 11 GQPVRVEMSMTIASIDQISEVDLDYTITLFLRQYWNDDRLIFRGVNRTLSLDGRLVEKLW 70
Query: 127 VPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTV 186
VPD F N K SFLH VT N+L+R+ +G + YG+R T AC MDL YPLD QNCT+
Sbjct: 71 VPDIFLVNAKQSFLHTVTVDNRLIRIFPNGDVLYGLRVTAKAACPMDLRKYPLDEQNCTL 130
Query: 187 EIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSF 244
E+ESYGYT ++ + WK V G+ L QFT+ + T + K TG Y RL SF
Sbjct: 131 ELESYGYTDEELELGWKAGNASVTGLGRLDLSQFTVGDYNTVAKLVKYETGNYWRLVFSF 190
Query: 245 KLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSL 304
+L R I YF+ QTYLP IL+V+LSWVSFW+NHE+ ARV LGITTVLTMTT+++ RSSL
Sbjct: 191 QLYRQIFYFILQTYLPMILLVILSWVSFWVNHESVPARVTLGITTVLTMTTLTSAARSSL 250
Query: 305 PRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SYWADRAKKKPKAK 350
P+ISY+KAID+Y+VMCF+FVFAALLEYAAVN+ + A R +KK + +
Sbjct: 251 PKISYIKAIDVYMVMCFLFVFAALLEYAAVNFQSNQRARRERKKLRKQ 298
>gi|402867638|ref|XP_003897948.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 isoform 1
[Papio anubis]
Length = 490
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 156/305 (51%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 89 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSM 148
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 149 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 208
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 209 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 268
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 269 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 328
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
MTTI TGV +S+PR+SYVKA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 329 MTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 388
Query: 352 PTPLG 356
P G
Sbjct: 389 PGMCG 393
>gi|426235139|ref|XP_004011548.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Ovis
aries]
Length = 606
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 162/349 (46%), Positives = 226/349 (64%), Gaps = 11/349 (3%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYV 72
ES++ + + K S +R ++T++ QLL +D +RP FGG + V
Sbjct: 167 ESRVHWRKRDIQEMLKKGSPILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPV 226
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTF 131
G+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD F
Sbjct: 227 GVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMF 286
Query: 132 FANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY 191
F + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY
Sbjct: 287 FVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESY 346
Query: 192 GYTVLDVVMYWKET--PVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQR 248
YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F L+R
Sbjct: 347 AYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRR 406
Query: 249 NIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS 308
+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+S
Sbjct: 407 HIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVS 466
Query: 309 YVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
Y+KA+DIYL + FVFVF ++LEYAAVNY + +R ++KP+ K P G
Sbjct: 467 YIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKPQEKLPCTCG 515
>gi|403261128|ref|XP_003922982.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Saimiri
boliviensis boliviensis]
Length = 465
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 155/305 (50%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE-DEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 64 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSATNKSM 123
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 124 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 183
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 184 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 243
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 244 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 303
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
MTTI TGV +S+PR+SYVKA+DIYL + FVFVF ++LEYAAVNY + +R +++ + K
Sbjct: 304 MTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERRLREKF 363
Query: 352 PTPLG 356
P G
Sbjct: 364 PCMCG 368
>gi|391329925|ref|XP_003739417.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-like [Metaseiulus occidentalis]
Length = 556
Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 145/302 (48%), Positives = 207/302 (68%), Gaps = 5/302 (1%)
Query: 40 TERLANVTQTISQL-LHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLN 98
T R NV+ + + GYD R+RPN+GG P+ VG+ + I S ++SEV MD+T Y
Sbjct: 17 TSRGRNVSLILDNFFIRGYDKRVRPNYGGLPVDVGVTMQIISISTVSEVQMDFTSDFYFR 76
Query: 99 QYWKDDRLAFSS--EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDG 156
Q W+D+RL+F+ + E +T+ + AEKIWVPDTFFAN+K+++ H T N +R++ +G
Sbjct: 77 QRWRDERLSFAKLPDLESMTVGAEVAEKIWVPDTFFANEKSAYFHTATTPNTFLRISHNG 136
Query: 157 SITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQ 214
+ +R T T +C MDL Y+P+D Q+CT+EIES+GYT+ D+ W E VR +E +
Sbjct: 137 DVLRSIRLTVTASCPMDLRYFPMDRQSCTIEIESFGYTMKDISYRWSEGEKSVRISKEVE 196
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
LPQF +LGH + L+TG Y RL + R++GY++ Q Y+P+ LIV++SWVSFW+
Sbjct: 197 LPQFKVLGHSQRSKAVVLSTGNYSRLVCEIRFVRSMGYYLIQIYIPAGLIVVISWVSFWL 256
Query: 275 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
+ AT ARVALG+TTV TMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V
Sbjct: 257 HRNATPARVALGVTTVSTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATV 316
Query: 335 NY 336
Y
Sbjct: 317 GY 318
>gi|456428|gb|AAA52510.1| gamma-amino butyric acid [Homo sapiens]
Length = 465
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 155/305 (50%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 64 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSM 123
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 124 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 183
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D++++WK + ++ E+ L QF I T R +
Sbjct: 184 HFPLDSQTCSLELESYAYTDEDLMLHWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 243
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 244 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 303
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
MTTI TGV +S+PR+SYVKA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 304 MTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 363
Query: 352 PTPLG 356
P G
Sbjct: 364 PCMCG 368
>gi|291410172|ref|XP_002721381.1| PREDICTED: gamma-aminobutyric acid (GABA) receptor, theta
[Oryctolagus cuniculus]
Length = 637
Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 138/298 (46%), Positives = 211/298 (70%), Gaps = 2/298 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
A V + + ++L YD+RLRPNFGGDP+ V + + ++S + ISE++MDYTITM+ +Q WKD
Sbjct: 57 AVVQKILDRVLSKYDVRLRPNFGGDPVPVRISIYVSSIEQISEINMDYTITMFFHQAWKD 116
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RLA+ + LTL EK WVPD +F N K++F+HDVT N++ +L+ DG++ YG+R
Sbjct: 117 SRLAYYETNLNLTLDYRMHEKFWVPDCYFLNSKDAFVHDVTVENRVFQLHPDGTVQYGIR 176
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTIL 221
TTT AC MDL +P+D Q C +E+ESYGYTV DV++ W+ E + EE ++PQF+ +
Sbjct: 177 LTTTAACSMDLRKFPMDKQACKLEVESYGYTVEDVILSWEDNENAIYMTEELKIPQFSFI 236
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G ++ TG+Y RL L F++QR + ++ Q Y P++L +LSW+SFW+N+++++A
Sbjct: 237 GRTITSKEVYFYTGSYMRLILKFQVQREVNSYLVQVYWPTVLTTILSWISFWMNYDSSAA 296
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
RV +G+T++L +TTI + +R LP IS +KAIDIY+++C FVF +LLEY +NY ++
Sbjct: 297 RVTIGLTSILVLTTIDSHMRDKLPNISCIKAIDIYILVCLFFVFLSLLEYVYINYLFF 354
>gi|406035356|ref|NP_001071414.2| gamma-aminobutyric acid receptor subunit rho-2 precursor [Bos
taurus]
gi|410516950|sp|Q0II76.4|GBRR2_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit rho-2;
AltName: Full=GABA(A) receptor subunit rho-2; AltName:
Full=GABA(C) receptor; Flags: Precursor
Length = 465
Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 153/305 (50%), Positives = 212/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF S+ ++ +
Sbjct: 64 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSASNKSM 123
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y MR T T C MD
Sbjct: 124 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFS 183
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 184 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 243
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 244 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 303
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 304 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLQEKF 363
Query: 352 PTPLG 356
P G
Sbjct: 364 PCMCG 368
>gi|296484072|tpg|DAA26187.1| TPA: gamma-aminobutyric acid (GABA) receptor, rho 1 [Bos taurus]
Length = 421
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 211/312 (67%), Gaps = 7/312 (2%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
QLL +D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F
Sbjct: 19 QLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFP 78
Query: 110 SEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S + + +T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T
Sbjct: 79 STNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTA 138
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HET 225
C MD +PLD Q C++EIESY YT D+++YWK+ ++ E L QF I H T
Sbjct: 139 MCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTT 198
Query: 226 NDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAL 285
+TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV L
Sbjct: 199 TKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPL 258
Query: 286 GITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAK 344
GITTVLTM+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R +
Sbjct: 259 GITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKE 318
Query: 345 KKPKAKEPTPLG 356
+KP+ K P G
Sbjct: 319 RKPQEKLPCTCG 330
>gi|431838152|gb|ELK00084.1| Gamma-aminobutyric acid receptor subunit rho-1 [Pteropus alecto]
Length = 462
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 162/349 (46%), Positives = 225/349 (64%), Gaps = 11/349 (3%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYV 72
ES++ E + K S +R ++T++ QLL +D +RP FGG + V
Sbjct: 23 ESRVHWRGREIHEMSKKGSPILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPV 82
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTF 131
G+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD F
Sbjct: 83 GVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMF 142
Query: 132 FANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY 191
F + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY
Sbjct: 143 FVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESY 202
Query: 192 GYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQR 248
YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F L+R
Sbjct: 203 AYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAYYSSTGWYNRLYINFTLRR 262
Query: 249 NIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS 308
+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+S
Sbjct: 263 HIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVS 322
Query: 309 YVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
Y+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 323 YIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKLPCTCG 371
>gi|301774576|ref|XP_002922712.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like,
partial [Ailuropoda melanoleuca]
Length = 492
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 154/305 (50%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF S+ ++ +
Sbjct: 91 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSM 150
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 151 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVYPDGHVLYSMRITVTAMCNMDFS 210
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + +R E+ L QF I T R +
Sbjct: 211 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLRTDEKVSLSQFLIQEFHTTSRLAFYS 270
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 271 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 330
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 331 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 390
Query: 352 PTPLG 356
P G
Sbjct: 391 PCMCG 395
>gi|359068814|ref|XP_002690251.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Bos
taurus]
Length = 504
Score = 310 bits (794), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 211/312 (67%), Gaps = 7/312 (2%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
QLL +D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F
Sbjct: 102 QLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFP 161
Query: 110 SEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S + + +T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T
Sbjct: 162 STNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTA 221
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HET 225
C MD +PLD Q C++EIESY YT D+++YWK+ ++ E L QF I H T
Sbjct: 222 MCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTT 281
Query: 226 NDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAL 285
+TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV L
Sbjct: 282 TKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPL 341
Query: 286 GITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAK 344
GITTVLTM+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R +
Sbjct: 342 GITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKE 401
Query: 345 KKPKAKEPTPLG 356
+KP+ K P G
Sbjct: 402 RKPQEKLPCTCG 413
>gi|113912067|gb|AAI22771.1| Gamma-aminobutyric acid (GABA) receptor, rho 2 [Bos taurus]
Length = 490
Score = 310 bits (793), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 224/339 (66%), Gaps = 5/339 (1%)
Query: 23 GNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFD 82
G ++ K +KK+ ++ + + +D +RP FGG + VG+D+ + S D
Sbjct: 55 GQLETSKPSHLYKKNPDMTKIRHGKPQPLLRVDDHDFTMRPAFGGPAIPVGVDVQVESLD 114
Query: 83 SISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLH 141
SISEV MD+T+T+YL YWKD+RLAF S+ ++ +T G +KIWVPD FF + K SF+H
Sbjct: 115 SISEVDMDFTMTLYLRHYWKDERLAFPSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFIH 174
Query: 142 DVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMY 201
D T N ++R+ DG + Y MR T T C MD ++PLD+Q C++E+ESY YT D+++Y
Sbjct: 175 DTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLY 234
Query: 202 WK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQTY 258
WK + ++ E+ L QF I T R + TG Y RL ++F L+R+I +F+ QTY
Sbjct: 235 WKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTY 294
Query: 259 LPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLV 318
P+ L+VMLSWVSFWI+ A ARV+LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL
Sbjct: 295 FPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLW 354
Query: 319 MCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
+ FVFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 355 VSFVFVFLSVLEYAAVNYLTTVQERKERKLQEKFPCMCG 393
>gi|355757709|gb|EHH61234.1| hypothetical protein EGM_19193 [Macaca fascicularis]
Length = 490
Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 154/305 (50%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 89 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSM 148
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 149 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 208
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 209 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 268
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 269 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 328
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 329 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 388
Query: 352 PTPLG 356
P G
Sbjct: 389 PGICG 393
>gi|194669974|ref|XP_599439.4| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Bos
taurus]
Length = 491
Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 211/312 (67%), Gaps = 7/312 (2%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
QLL +D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F
Sbjct: 89 QLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFP 148
Query: 110 SEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S + + +T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T
Sbjct: 149 STNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTA 208
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HET 225
C MD +PLD Q C++EIESY YT D+++YWK+ ++ E L QF I H T
Sbjct: 209 MCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTT 268
Query: 226 NDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAL 285
+TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV L
Sbjct: 269 TKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPL 328
Query: 286 GITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAK 344
GITTVLTM+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R +
Sbjct: 329 GITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKE 388
Query: 345 KKPKAKEPTPLG 356
+KP+ K P G
Sbjct: 389 RKPQEKLPCTCG 400
>gi|311244175|ref|XP_003121344.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like [Sus
scrofa]
Length = 465
Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 156/333 (46%), Positives = 222/333 (66%), Gaps = 5/333 (1%)
Query: 23 GNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFD 82
G ++ K +KK+ ++ N + +D +RP FGG + VG+D+ + S D
Sbjct: 30 GQLETSKPSHLYKKNLDMTKIRNGKPQPLLRVDDHDFTMRPAFGGPAIPVGVDVQVESLD 89
Query: 83 SISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLH 141
SISEV MD+T+T+YL YWKD+RLAF S+ ++ +T G +KIWVPD FF + K SF+H
Sbjct: 90 SISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSMTFDGRLVKKIWVPDVFFVHSKRSFIH 149
Query: 142 DVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMY 201
D T N ++R+ DG + Y MR T T C MD ++PLD+Q C++E+ESY YT D+++Y
Sbjct: 150 DTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLY 209
Query: 202 WK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQTY 258
WK + ++ E+ L QF I T R + TG Y RL ++F L+R+I +F+ QTY
Sbjct: 210 WKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTY 269
Query: 259 LPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLV 318
P+ L+VMLSWVSFWI+ A ARV+LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL
Sbjct: 270 FPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLW 329
Query: 319 MCFVFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
+ FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 330 VSFVFVFLSVLEYAAVNYLTTVQERKERKSQEK 362
>gi|410959656|ref|XP_003986419.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Felis
catus]
Length = 465
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/305 (50%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF S+ ++ +
Sbjct: 64 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTNNKSM 123
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 124 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 183
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 184 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 243
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 244 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 303
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 304 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 363
Query: 352 PTPLG 356
P G
Sbjct: 364 PCTCG 368
>gi|194216259|ref|XP_001500725.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Equus caballus]
Length = 486
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/303 (50%), Positives = 211/303 (69%), Gaps = 5/303 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 89 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSTSNKSM 148
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y MR T T C MD
Sbjct: 149 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 208
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 209 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 268
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 269 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 328
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 329 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLQEKC 388
Query: 352 PTP 354
P
Sbjct: 389 EMP 391
>gi|126310601|ref|XP_001376559.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2
[Monodelphis domestica]
Length = 464
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/336 (47%), Positives = 220/336 (65%), Gaps = 7/336 (2%)
Query: 28 EKLRLCHKKSATTERLANVTQTISQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
E RL H T + QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 33 EMPRLSHLSKKTHDITKFQKGKTEQLLRVDEHDFTMRPAFGGPAIPVGVDVQVESLDSIS 92
Query: 86 EVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S+ ++ +T G +KIWVPD FF + K SF HD T
Sbjct: 93 EVDMDFTMTLYLRHYWKDERLSFPSTTNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTT 152
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK- 203
N ++R+ DG + Y MR T T C MD ++PLD+Q C++E+ESY YT D+++YWK
Sbjct: 153 TDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKN 212
Query: 204 -ETPVRGVEEAQLPQFTILGHETNDRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
+ ++ E+ L QF I T R + TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 213 GDESLKTDEKISLSQFLIHKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 272
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+H A ARV+LG TTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 273 TLMVMLSWVSFWIDHRAVPARVSLGSTTVLTMSTIITGVNASMPRVSYIKAVDIYLWISF 332
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
VFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 333 VFVFLSVLEYAAVNYLTTVQERKERKLRDKVPCLCG 368
>gi|410959652|ref|XP_003986417.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Felis catus]
Length = 462
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/349 (46%), Positives = 225/349 (64%), Gaps = 11/349 (3%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYV 72
ES++ E + K S +R ++T++ QLL +D +RP FGG + V
Sbjct: 23 ESRVHWRRREVHEMSKKGSPILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPV 82
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTF 131
G+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD F
Sbjct: 83 GVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMF 142
Query: 132 FANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY 191
F + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY
Sbjct: 143 FVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESY 202
Query: 192 GYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQR 248
YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F L+R
Sbjct: 203 AYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRR 262
Query: 249 NIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS 308
+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+S
Sbjct: 263 HIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVS 322
Query: 309 YVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
Y+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 323 YIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKLPCTCG 371
>gi|395534598|ref|XP_003769327.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2
[Sarcophilus harrisii]
Length = 464
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/341 (46%), Positives = 224/341 (65%), Gaps = 9/341 (2%)
Query: 23 GNSDSEKLRLCHKKSATTERLANVTQTISQLLH--GYDIRLRPNFGGDPLYVGMDLTIAS 80
G + +L +KK+ +L QLL +D +RP FGG + VG+D+ + S
Sbjct: 30 GQLEMPRLSHLYKKTHDITKLQK--GKTEQLLRVDEHDFTMRPAFGGPAIPVGVDVQVES 87
Query: 81 FDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSF 139
DSISEV MD+T+T+YL YWKD+RL+F S+ ++ +T G +KIWVPD FF + K SF
Sbjct: 88 LDSISEVDMDFTMTLYLRHYWKDERLSFPSTTNKSMTFDGRLVKKIWVPDVFFVHSKRSF 147
Query: 140 LHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVV 199
HD T N ++R+ DG + Y MR T T C MD ++PLD+Q C++E+ESY YT D++
Sbjct: 148 THDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLM 207
Query: 200 MYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQ 256
+YWK + ++ E+ L QF I T R + TG Y RL ++F L+R+I +F+ Q
Sbjct: 208 LYWKNGDESLKTDEKISLSQFLIHKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQ 267
Query: 257 TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY 316
TY P+ L+VMLSWVSFWI+H A ARV+LG TTVLTM+TI TGV +S+PR+SY+KA+DIY
Sbjct: 268 TYFPATLMVMLSWVSFWIDHRAVPARVSLGSTTVLTMSTIITGVNASMPRVSYIKAVDIY 327
Query: 317 LVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
L + FVFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 328 LWVSFVFVFLSVLEYAAVNYLTTVQERKERKLRDKVPCTCG 368
>gi|426234694|ref|XP_004011327.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Ovis
aries]
Length = 489
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/305 (50%), Positives = 212/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF S+ ++ +
Sbjct: 88 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSASNKSM 147
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y MR T T C MD
Sbjct: 148 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFS 207
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 208 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 267
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 268 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 327
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 328 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLQEKF 387
Query: 352 PTPLG 356
P G
Sbjct: 388 PCMCG 392
>gi|410516955|sp|P56476.4|GBRR2_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit rho-2;
AltName: Full=GABA(A) receptor subunit rho-2; AltName:
Full=GABA(C) receptor; Flags: Precursor
Length = 465
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/305 (49%), Positives = 212/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YW+D+RLAF SS ++ +
Sbjct: 64 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSNKSM 123
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y MR T T C MD
Sbjct: 124 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 183
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 184 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 243
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+H A ARV+LGI TVLT
Sbjct: 244 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLT 303
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY++A+DIYL + FVFVF ++LEYAAVNY + ++ ++K + K
Sbjct: 304 MSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVLEYAAVNYLTTLQEQKERKFREKL 363
Query: 352 PTPLG 356
P G
Sbjct: 364 PCMCG 368
>gi|395849939|ref|XP_003797564.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Otolemur garnettii]
Length = 462
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/351 (46%), Positives = 226/351 (64%), Gaps = 11/351 (3%)
Query: 17 ELESQIGNSDSEKLRLCHKKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPL 70
+ ES++ E + K S +R ++T++ QLL +D +RP FGG +
Sbjct: 21 DTESRVHWPGREVHEMSKKGSPILKRSPDITKSPLMKSEQLLRIDDHDFSMRPGFGGPAI 80
Query: 71 YVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPD 129
VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF S + + +T G +KIWVPD
Sbjct: 81 PVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTNNLSMTFDGRLVKKIWVPD 140
Query: 130 TFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIE 189
FF + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++EIE
Sbjct: 141 MFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIE 200
Query: 190 SYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKL 246
SY YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F L
Sbjct: 201 SYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTL 260
Query: 247 QRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPR 306
+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR
Sbjct: 261 RRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPR 320
Query: 307 ISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 321 VSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCAGG 371
>gi|87299642|ref|NP_032102.2| gamma-aminobutyric acid receptor subunit rho-2 [Mus musculus]
gi|112180531|gb|AAH57957.2| Gamma-aminobutyric acid (GABA-C) receptor, subunit rho 2 [Mus
musculus]
gi|148673545|gb|EDL05492.1| mCG12753, isoform CRA_c [Mus musculus]
Length = 490
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/305 (49%), Positives = 212/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YW+D+RLAF SS ++ +
Sbjct: 89 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSNKSM 148
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y MR T T C MD
Sbjct: 149 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 208
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 209 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 268
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+H A ARV+LGI TVLT
Sbjct: 269 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLT 328
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY++A+DIYL + FVFVF ++LEYAAVNY + ++ ++K + K
Sbjct: 329 MSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVLEYAAVNYLTTLQEQKERKFREKL 388
Query: 352 PTPLG 356
P G
Sbjct: 389 PCMCG 393
>gi|148673544|gb|EDL05491.1| mCG12753, isoform CRA_b [Mus musculus]
Length = 507
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/305 (49%), Positives = 212/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YW+D+RLAF SS ++ +
Sbjct: 106 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSNKSM 165
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y MR T T C MD
Sbjct: 166 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 225
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 226 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 285
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+H A ARV+LGI TVLT
Sbjct: 286 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLT 345
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY++A+DIYL + FVFVF ++LEYAAVNY + ++ ++K + K
Sbjct: 346 MSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVLEYAAVNYLTTLQEQKERKFREKL 405
Query: 352 PTPLG 356
P G
Sbjct: 406 PCMCG 410
>gi|149759465|ref|XP_001497075.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Equus
caballus]
Length = 632
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 218/313 (69%), Gaps = 4/313 (1%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + K+ E A V + + ++L YD RLRPNFGG P+ VG+ + ++S + ISE++M
Sbjct: 45 LNLFNCKNCANE--AVVHKILDRVLSRYDARLRPNFGGAPVPVGVSIYVSSIEEISEMTM 102
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM +Q WKD RLA+ + LTL EK+WVPD +F N K++F+HDVT N++
Sbjct: 103 DYTITMIFHQTWKDPRLAYYETNLTLTLDYRMLEKLWVPDCYFLNSKDAFVHDVTVENRM 162
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+L+ DG++ YG+R TTT AC ++L +PLD Q C +E+ESYGYTV D+V+YW+ +
Sbjct: 163 FQLHPDGTVRYGIRLTTTAACSLNLQKFPLDKQTCKLEVESYGYTVEDIVLYWEGNGNAI 222
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
+G E+ Q+PQF+ LG ++ TG+Y RL L F +QR + ++ Q Y P+IL ++
Sbjct: 223 QGTEKLQIPQFSFLGKTMTSKEVFFFTGSYVRLILRFLVQREVTSYLVQIYWPTILTTVV 282
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SW+SFW+N+E+++ARV +G+T++L + I++ +R LP++S +KAIDIY+V+C FVF +
Sbjct: 283 SWISFWMNYESSAARVTVGLTSMLVLNAINSHLRDKLPQVSCIKAIDIYMVVCLFFVFLS 342
Query: 328 LLEYAAVNYSYWA 340
LLEY +NY +++
Sbjct: 343 LLEYVHINYLFYS 355
>gi|344264641|ref|XP_003404400.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1
[Loxodonta africana]
Length = 479
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/334 (47%), Positives = 220/334 (65%), Gaps = 11/334 (3%)
Query: 34 HKKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEV 87
H+ S +R ++T++ QLL +D +RP FGG + VG+D+ + S DSISEV
Sbjct: 55 HQGSPVLKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAVPVGVDVQVESLDSISEV 114
Query: 88 SMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVTER 146
MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 115 DMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTD 174
Query: 147 NKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE-- 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 175 NVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGN 234
Query: 205 TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSIL 263
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+ L
Sbjct: 235 DSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATL 294
Query: 264 IVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVF 323
+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + FVF
Sbjct: 295 MVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVF 354
Query: 324 VFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
VF ++LEYAAVNY + +R ++K + K P G
Sbjct: 355 VFLSVLEYAAVNYLTTVQERKERKLQEKLPCACG 388
>gi|73973905|ref|XP_539039.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Canis
lupus familiaris]
Length = 490
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/305 (50%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF S+ ++ +
Sbjct: 89 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSM 148
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 149 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 208
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 209 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 268
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 269 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 328
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 329 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLRDKF 388
Query: 352 PTPLG 356
P G
Sbjct: 389 PCMCG 393
>gi|194382230|dbj|BAG58870.1| unnamed protein product [Homo sapiens]
Length = 462
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/349 (46%), Positives = 224/349 (64%), Gaps = 11/349 (3%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYV 72
ES++ E + K S R ++T++ QLL +D +RP FGG + V
Sbjct: 23 ESRVHWPGREVHEMSKKGSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPV 82
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTF 131
G+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD F
Sbjct: 83 GVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMF 142
Query: 132 FANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY 191
F + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY
Sbjct: 143 FVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESY 202
Query: 192 GYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQR 248
YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F L+R
Sbjct: 203 AYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRR 262
Query: 249 NIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS 308
+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+S
Sbjct: 263 HIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVS 322
Query: 309 YVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
Y+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 323 YIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 371
>gi|440911380|gb|ELR61056.1| Gamma-aminobutyric acid receptor subunit rho-2 [Bos grunniens
mutus]
Length = 493
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/318 (48%), Positives = 214/318 (67%), Gaps = 4/318 (1%)
Query: 23 GNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFD 82
G +S K +KK+ ++ + + +D +RP FGG + VG+D+ + S D
Sbjct: 55 GQLESSKPSHLYKKNPDMTKIRHGKPQPLLRVDDHDFTMRPAFGGPAIPVGVDVQVESLD 114
Query: 83 SISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLH 141
SISEV MD+T+T+YL YWKD+RLAF S+ ++ +T G +KIWVPD FF + K SF+H
Sbjct: 115 SISEVDMDFTMTLYLRHYWKDERLAFPSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFIH 174
Query: 142 DVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMY 201
D T N ++R+ DG + Y MR T T C MD ++PLD+Q C++E+ESY YT D+++Y
Sbjct: 175 DTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLY 234
Query: 202 WK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQTY 258
WK + ++ E+ L QF I T R + TG Y RL ++F L+R+I +F+ QTY
Sbjct: 235 WKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTY 294
Query: 259 LPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLV 318
P+ L+VMLSWVSFWI+ A ARV+LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL
Sbjct: 295 FPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLW 354
Query: 319 MCFVFVFAALLEYAAVNY 336
+ FVFVF ++LEYAAVNY
Sbjct: 355 VSFVFVFLSVLEYAAVNY 372
>gi|410989597|ref|XP_004001045.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Felis
catus]
Length = 630
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 138/299 (46%), Positives = 214/299 (71%), Gaps = 2/299 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
A V + + ++L YD+RLRPNFGG P+ VG+ + ++S + ISE++MDYTITM+ +Q WKD
Sbjct: 57 AVVHKILDRVLSRYDVRLRPNFGGAPVPVGVSIYVSSIEQISEMTMDYTITMFFHQTWKD 116
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RLA+ + LTL EK+WVPD +F N K++F+HDVT N++ +L+ DG++ YG+R
Sbjct: 117 PRLAYYETNLNLTLDYRMLEKLWVPDCYFLNSKDAFVHDVTVENRVFQLHPDGTVRYGIR 176
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTIL 221
TTT AC ++L +PLD Q C +E+ESYGYTV D+V+YW+ ++G E+ +PQF+ L
Sbjct: 177 LTTTAACSLNLQKFPLDKQTCKLEVESYGYTVEDIVLYWEGNGNAIQGTEKLHIPQFSFL 236
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G ++ TG+Y RL L F +QR + ++ Q Y P++L ++SW+SFW+N+E+++A
Sbjct: 237 GKTMASKEVFFYTGSYVRLILRFLVQREVTSYLVQIYWPTVLTTVVSWISFWMNYESSAA 296
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
RV +G+T++L + I++ +R LP+IS +KAIDIY+V+CF FVF +LLEY +NY +++
Sbjct: 297 RVTVGLTSMLILNAINSHLRDKLPQISCIKAIDIYMVVCFFFVFLSLLEYVYINYLFYS 355
>gi|426353966|ref|XP_004044443.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Gorilla gorilla gorilla]
Length = 462
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/349 (46%), Positives = 224/349 (64%), Gaps = 11/349 (3%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYV 72
ES++ E + K S R ++T++ QLL +D +RP FGG + V
Sbjct: 23 ESRVHWPGREVHEMSKKGSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPV 82
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTF 131
G+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD F
Sbjct: 83 GVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMF 142
Query: 132 FANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY 191
F + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY
Sbjct: 143 FVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESY 202
Query: 192 GYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQR 248
YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F L+R
Sbjct: 203 AYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRR 262
Query: 249 NIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS 308
+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+S
Sbjct: 263 HIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVS 322
Query: 309 YVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
Y+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 323 YIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 371
>gi|440911381|gb|ELR61057.1| Gamma-aminobutyric acid receptor subunit rho-1, partial [Bos
grunniens mutus]
Length = 477
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 211/312 (67%), Gaps = 7/312 (2%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
QLL +D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F
Sbjct: 75 QLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFP 134
Query: 110 SEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S + + +T G +KIWVPD FF + K SF+HD T N ++R+ +G + Y +R T T
Sbjct: 135 STNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPNGKVLYSLRVTVTA 194
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HET 225
C MD +PLD Q C++EIESY YT D+++YWK+ ++ E L QF I H T
Sbjct: 195 MCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTT 254
Query: 226 NDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAL 285
+TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV L
Sbjct: 255 TKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPL 314
Query: 286 GITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAK 344
GITTVLTM+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R +
Sbjct: 315 GITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKE 374
Query: 345 KKPKAKEPTPLG 356
+KP+ K P G
Sbjct: 375 RKPQEKLPCTCG 386
>gi|332824526|ref|XP_001157592.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Pan troglodytes]
Length = 462
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/349 (46%), Positives = 224/349 (64%), Gaps = 11/349 (3%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYV 72
ES++ E + K S R ++T++ QLL +D +RP FGG + V
Sbjct: 23 ESRVHWPGREVHEMSKKGSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPV 82
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTF 131
G+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD F
Sbjct: 83 GVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMF 142
Query: 132 FANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY 191
F + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY
Sbjct: 143 FVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESY 202
Query: 192 GYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQR 248
YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F L+R
Sbjct: 203 AYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRR 262
Query: 249 NIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS 308
+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+S
Sbjct: 263 HIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVS 322
Query: 309 YVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
Y+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 323 YIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 371
>gi|297291319|ref|XP_002803870.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Macaca mulatta]
gi|402867632|ref|XP_003897945.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Papio anubis]
Length = 462
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/349 (46%), Positives = 224/349 (64%), Gaps = 11/349 (3%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYV 72
ES++ E + K S R ++T++ QLL +D +RP FGG + V
Sbjct: 23 ESRVHWPGREVHEMSKKGSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPV 82
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTF 131
G+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD F
Sbjct: 83 GVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMF 142
Query: 132 FANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY 191
F + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY
Sbjct: 143 FVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESY 202
Query: 192 GYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQR 248
YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F L+R
Sbjct: 203 AYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRR 262
Query: 249 NIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS 308
+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+S
Sbjct: 263 HIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVS 322
Query: 309 YVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
Y+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 323 YIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 371
>gi|332218465|ref|XP_003258375.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Nomascus leucogenys]
Length = 462
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/349 (46%), Positives = 224/349 (64%), Gaps = 11/349 (3%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYV 72
ES++ E + K S R ++T++ QLL +D +RP FGG + V
Sbjct: 23 ESRVHWPGREVHEMSKKGSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPV 82
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTF 131
G+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD F
Sbjct: 83 GVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMF 142
Query: 132 FANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY 191
F + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY
Sbjct: 143 FVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESY 202
Query: 192 GYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQR 248
YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F L+R
Sbjct: 203 AYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRR 262
Query: 249 NIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS 308
+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+S
Sbjct: 263 HIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVS 322
Query: 309 YVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
Y+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 323 YIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 371
>gi|39930467|ref|NP_113921.1| gamma-aminobutyric acid receptor subunit theta precursor [Rattus
norvegicus]
gi|16225670|gb|AAL15939.1| GABA theta subunit [Rattus norvegicus]
Length = 635
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 135/306 (44%), Positives = 215/306 (70%), Gaps = 1/306 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
A V + + ++L YD+RLRPNFGG P+ V + + ++S + ISE++MDYTITM+L+Q WKD
Sbjct: 52 AVVQKILDRVLSTYDVRLRPNFGGAPVPVSISIYVSSIEQISEINMDYTITMFLHQTWKD 111
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RLA+ + LTL EK+WVPD +F N K++F+HDVT N++ +L+ DG++ YG+R
Sbjct: 112 TRLAYYETNLNLTLDYRMHEKLWVPDCYFVNSKDAFVHDVTAENRVFQLHPDGTVQYGIR 171
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILG 222
TTT AC +DL +P+D Q+C +E+ESYGYTV D+V+ W+ + + +E +PQ+T LG
Sbjct: 172 LTTTAACSLDLQKFPMDKQSCKLEVESYGYTVEDIVLSWEDDNAIHITDELHIPQYTYLG 231
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
++ TG+Y RL + F++QR + ++ Q Y P++L +LSW+SFW+N+ +++AR
Sbjct: 232 RTITSKEVYFYTGSYMRLIVKFQVQREVRSYLVQVYWPTVLTTILSWISFWMNYGSSAAR 291
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADR 342
V +G+T++L +TTI + +R LP IS +KAIDIY+++C FVF +LLEY +NY +++
Sbjct: 292 VTIGLTSILVLTTIDSHMRDKLPHISCIKAIDIYILVCLFFVFLSLLEYVYINYLFFSQA 351
Query: 343 AKKKPK 348
++ +
Sbjct: 352 PRRNHR 357
>gi|345327584|ref|XP_001513550.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Ornithorhynchus anatinus]
Length = 464
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 151/305 (49%), Positives = 211/305 (69%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S+ ++ +
Sbjct: 64 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTTNKSM 123
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y MR T T C MD
Sbjct: 124 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTENIMLRVFPDGHVLYSMRITVTAMCNMDFS 183
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 184 HFPLDTQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 243
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 244 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 303
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + +
Sbjct: 304 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLRDRF 363
Query: 352 PTPLG 356
P G
Sbjct: 364 PCMCG 368
>gi|375493570|ref|NP_001243632.1| gamma-aminobutyric acid receptor subunit rho-1 isoform b precursor
[Homo sapiens]
Length = 462
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 162/349 (46%), Positives = 224/349 (64%), Gaps = 11/349 (3%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYV 72
ES++ E + K S R ++T++ QLL +D +RP FGG + V
Sbjct: 23 ESRMHWPGREVHEMSKKGSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPV 82
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTF 131
G+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD F
Sbjct: 83 GVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMF 142
Query: 132 FANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY 191
F + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY
Sbjct: 143 FVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESY 202
Query: 192 GYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQR 248
YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F L+R
Sbjct: 203 AYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRR 262
Query: 249 NIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS 308
+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+S
Sbjct: 263 HIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVS 322
Query: 309 YVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
Y+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 323 YIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 371
>gi|149027093|gb|EDL82835.1| gamma-aminobutyric acid A receptor, theta, isoform CRA_b [Rattus
norvegicus]
Length = 640
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 221/320 (69%), Gaps = 3/320 (0%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + K+ E A V + + ++L YD+RLRPNFGG P+ V + + ++S + ISE++M
Sbjct: 45 LDLFNCKNCANE--AVVQKILDRVLSTYDVRLRPNFGGAPVPVSISIYVSSIEQISEINM 102
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM+L+Q WKD RLA+ + LTL EK+WVPD +F N K++F+HDVT N++
Sbjct: 103 DYTITMFLHQTWKDTRLAYYETNLNLTLDYRMHEKLWVPDCYFVNSKDAFVHDVTAENRV 162
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVR 208
+L+ DG++ YG+R TTT AC +DL +P+D Q+C +E+ESYGYTV D+V+ W+ + +
Sbjct: 163 FQLHPDGTVQYGIRLTTTAACSLDLQKFPMDKQSCKLEVESYGYTVEDIVLSWEDDNAIH 222
Query: 209 GVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLS 268
+E +PQ+T LG ++ TG+Y RL + F++QR + ++ Q Y P++L +LS
Sbjct: 223 ITDELHIPQYTYLGRTITSKEVYFYTGSYMRLIVKFQVQREVRSYLVQVYWPTVLTTILS 282
Query: 269 WVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAAL 328
W+SFW+N+ +++ARV +G+T++L +TTI + +R LP IS +KAIDIY+++C FVF +L
Sbjct: 283 WISFWMNYGSSAARVTIGLTSILVLTTIDSHMRDKLPHISCIKAIDIYILVCLFFVFLSL 342
Query: 329 LEYAAVNYSYWADRAKKKPK 348
LEY +NY +++ ++ +
Sbjct: 343 LEYVYINYLFFSQAPRRNHR 362
>gi|397504696|ref|XP_003822919.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Pan paniscus]
Length = 462
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 161/349 (46%), Positives = 224/349 (64%), Gaps = 11/349 (3%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYV 72
ES++ E + K S R ++T++ QLL +D +RP FGG + V
Sbjct: 23 ESRVHWPGREVHEMSKKGSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPV 82
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTF 131
G+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD F
Sbjct: 83 GVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMF 142
Query: 132 FANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY 191
F + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY
Sbjct: 143 FVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESY 202
Query: 192 GYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQR 248
YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F L+R
Sbjct: 203 AYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRR 262
Query: 249 NIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS 308
+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+S
Sbjct: 263 HIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVS 322
Query: 309 YVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
Y+KA+D+YL + FVFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 323 YIKAVDVYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 371
>gi|443687136|gb|ELT90208.1| hypothetical protein CAPTEDRAFT_34060, partial [Capitella teleta]
Length = 438
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 149/295 (50%), Positives = 202/295 (68%), Gaps = 3/295 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV+ + LL GYD RLRPN+ G P+ VG+ + ++S SISEV MD+T+ Y Q W D
Sbjct: 1 NVSSLLDDLLKGYDKRLRPNYKGSPVEVGITMYVSSVSSISEVDMDFTLDFYFRQMWNDP 60
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F ++E L +S + KIW PDTFFA K++ H T +N +R+ G + +R
Sbjct: 61 RLRFDPKEEELCISNEMLAKIWWPDTFFATAKDAKFHIATTKNAFLRIKPSGDVLQSLRL 120
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV---EEAQLPQFTIL 221
T T C MDL Y+P+D Q C++EIESYGY+V D+ W + P V +E QLPQF +
Sbjct: 121 TVTSVCRMDLTYFPMDTQICSLEIESYGYSVKDIKYRWNDGPSHSVSIDDEVQLPQFNVR 180
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
GH ++R +KL+TG Y RLS F R++GY++ Q Y+PS LIV+LSWVSFW++ EA A
Sbjct: 181 GHRASERTQKLSTGNYSRLSCEFFFVRSLGYYIIQIYVPSTLIVVLSWVSFWLSREAVPA 240
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
RVALGITTVLTMTT+ + ++LP+ISY+K+ID+YLV CFV VF +L+EYAAV+Y
Sbjct: 241 RVALGITTVLTMTTLISSTNAALPKISYLKSIDVYLVTCFVMVFGSLIEYAAVSY 295
>gi|326916205|ref|XP_003204400.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Meleagris gallopavo]
Length = 488
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 153/305 (50%), Positives = 209/305 (68%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S+ + +
Sbjct: 88 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTTNNSM 147
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y MR T T C MD
Sbjct: 148 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 207
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEKLA 233
+PLD+Q C++E+ESY YT D+++YWK ++ E+ L QF I T R +
Sbjct: 208 RFPLDSQTCSLELESYAYTDEDLMLYWKNGNESLKTDEKISLSQFLIQKFHTTSRLAFYS 267
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL +SF L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 268 STGWYNRLYISFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 327
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 328 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 387
Query: 352 PTPLG 356
P G
Sbjct: 388 PCTCG 392
>gi|260812497|ref|XP_002600957.1| hypothetical protein BRAFLDRAFT_79146 [Branchiostoma floridae]
gi|229286247|gb|EEN56969.1| hypothetical protein BRAFLDRAFT_79146 [Branchiostoma floridae]
Length = 428
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/308 (48%), Positives = 207/308 (67%), Gaps = 6/308 (1%)
Query: 50 ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
+ +LL YD R+RPNF G+ + V +D+ + SF SI+E +MDY + ++L Q W D RL F
Sbjct: 41 LDKLLEKYDARIRPNFKGEAVNVSVDIFVNSFGSIAETTMDYRVNIFLRQRWNDPRLKFM 100
Query: 110 SEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLA 169
+E L+L KIWVPD FFAN+K + H VT NKL+R++ G I Y +R T TLA
Sbjct: 101 DYNESLSLDTSLLRKIWVPDLFFANEKGANFHAVTTENKLLRISPAGDILYSIRLTLTLA 160
Query: 170 CMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR 228
C M L +P+D Q C +++ES+GY+ D+ WK + PV+ E+ +LPQF + G+
Sbjct: 161 CPMRLQRFPMDRQQCNMQLESFGYSTSDLNFRWKNDNPVQLSEDLELPQFKVEGYTLTRC 220
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + F L R +GY++ QTY+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 221 DKTYNTGIFTCIEAQFNLVRQMGYYLIQTYIPSLLIVILSWVSFWINMDAAPARVALGIT 280
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA----- 343
TVLTMTT S+G R+ LP++SYVKAIDI++ +C +FVFAALLE+AAVN+ D+
Sbjct: 281 TVLTMTTQSSGSRAQLPKVSYVKAIDIWMAVCLLFVFAALLEFAAVNFVSRQDKELLRIR 340
Query: 344 KKKPKAKE 351
++K K K+
Sbjct: 341 RRKQKNKK 348
>gi|281348284|gb|EFB23868.1| hypothetical protein PANDA_017045 [Ailuropoda melanoleuca]
Length = 660
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 220/313 (70%), Gaps = 4/313 (1%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + K+ E A V + + ++L YD+RLRPNFGG P+ VG+ + ++S + ISE++M
Sbjct: 45 LNLFNCKNCANE--AVVHKILDRVLSRYDVRLRPNFGGAPVPVGVSIYVSSIEQISEMTM 102
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM+ +Q WKD RLA+ + LTL EK+WVPD +F N K++F+HDVT N++
Sbjct: 103 DYTITMFFHQTWKDPRLAYHETNLNLTLDYRMLEKLWVPDCYFLNSKDAFVHDVTVENRV 162
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+L+ DG++ YG+R TTT AC +DL +PLD Q C +E+ESYGYTV D+++YW+ +
Sbjct: 163 FQLHPDGTVRYGIRLTTTAACSLDLQKFPLDKQTCKLEVESYGYTVEDILLYWEGNGNAI 222
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
+G ++ +PQF+ LG ++ TG+Y RL L F +QR + ++ Q Y P++L ++
Sbjct: 223 QGTDKLHIPQFSFLGKTMTSKEVFFYTGSYVRLILRFLVQREVTSYLVQIYWPTVLTTVV 282
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SW+SFW+N+E+++ARV +G+T++L + I++ +R LP+++ +KAIDIY+V+CF FVF +
Sbjct: 283 SWISFWMNYESSAARVTVGLTSMLILNAINSHLRDKLPQVACIKAIDIYMVVCFFFVFLS 342
Query: 328 LLEYAAVNYSYWA 340
LLEY +NY +++
Sbjct: 343 LLEYVYINYLFYS 355
>gi|300798171|ref|NP_001179568.1| gamma-aminobutyric acid receptor subunit theta precursor [Bos
taurus]
gi|296471167|tpg|DAA13282.1| TPA: gamma-aminobutyric acid (GABA) receptor, theta [Bos taurus]
Length = 642
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 137/309 (44%), Positives = 216/309 (69%), Gaps = 2/309 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
A V + + ++L YD RLRPNFGG P+ VG+ + ++S + ISEV+MDYTITM+ +Q WKD
Sbjct: 57 ATVHKILDRVLSNYDSRLRPNFGGTPVPVGVSIYVSSIEQISEVTMDYTITMFFHQTWKD 116
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RLA+ + LTL EK+WVPD +F N K +F+HD T N++ +L+ DG++ YG+R
Sbjct: 117 PRLAYHETNLNLTLDYRLFEKLWVPDCYFLNSKEAFVHDATVENRVFQLHPDGTVRYGIR 176
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTIL 221
TTT AC M+L +PLD Q C +E+ESYGYTV D+++YW+ + V+G E+ +PQF+ L
Sbjct: 177 LTTTAACSMNLEKFPLDKQTCKLEVESYGYTVDDILLYWEGSGNAVQGTEKLHIPQFSFL 236
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G + ++ TG+Y RL L F ++R + ++ Q Y PS+L ++SW+SFW+N+E+++A
Sbjct: 237 GKTISTKEVFFYTGSYVRLILRFLVKREVTSYLVQIYWPSVLTTVVSWISFWMNYESSAA 296
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD 341
RV +G+T++L + +I++ +R+ P+ S +KAIDIY+V+CF FVF +L+EY +NY ++
Sbjct: 297 RVTVGLTSMLILNSINSHLRNQFPQFSCIKAIDIYMVVCFFFVFLSLVEYVYINYLFYNR 356
Query: 342 RAKKKPKAK 350
R + + +
Sbjct: 357 RGSRHSQRQ 365
>gi|281344248|gb|EFB19832.1| hypothetical protein PANDA_011707 [Ailuropoda melanoleuca]
Length = 493
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 152/299 (50%), Positives = 209/299 (69%), Gaps = 5/299 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF S+ ++ +
Sbjct: 85 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSM 144
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 145 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVYPDGHVLYSMRITVTAMCNMDFS 204
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + +R E+ L QF I T R +
Sbjct: 205 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLRTDEKVSLSQFLIQEFHTTSRLAFYS 264
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 265 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 324
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 325 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREK 383
>gi|440911794|gb|ELR61429.1| Gamma-aminobutyric acid receptor subunit theta [Bos grunniens
mutus]
Length = 635
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 137/309 (44%), Positives = 216/309 (69%), Gaps = 2/309 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
A V + + ++L YD RLRPNFGG P+ VG+ + ++S + ISEV+MDYTITM+ +Q WKD
Sbjct: 57 ATVHKILDRVLSNYDSRLRPNFGGTPVPVGVSIYVSSIEQISEVTMDYTITMFFHQTWKD 116
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RLA+ + LTL EK+WVPD +F N K +F+HD T N++ +L+ DG++ YG+R
Sbjct: 117 PRLAYHETNLNLTLDYRLFEKLWVPDCYFLNSKEAFVHDATVENRVFQLHPDGTVRYGIR 176
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTIL 221
TTT AC M+L +PLD Q C +E+ESYGYTV D+++YW+ + V+G E+ +PQF+ L
Sbjct: 177 LTTTAACSMNLEKFPLDKQTCKLEVESYGYTVDDILLYWEGSGNAVQGTEKLHIPQFSFL 236
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G + ++ TG+Y RL L F ++R + ++ Q Y PS+L ++SW+SFW+N+E+++A
Sbjct: 237 GKTISTKEVFFYTGSYVRLILRFLVKREVTSYLVQIYWPSVLTTVVSWISFWMNYESSAA 296
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD 341
RV +G+T++L + +I++ +R+ P+ S +KAIDIY+V+CF FVF +L+EY +NY ++
Sbjct: 297 RVTVGLTSMLILNSINSHLRNQFPQFSCIKAIDIYMVVCFFFVFLSLVEYVYINYLFYNR 356
Query: 342 RAKKKPKAK 350
R + + +
Sbjct: 357 RGSRHSQRQ 365
>gi|348531555|ref|XP_003453274.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-1 [Oreochromis niloticus]
Length = 471
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 161/353 (45%), Positives = 231/353 (65%), Gaps = 15/353 (4%)
Query: 19 ESQIGNSDSEKLRLCH----KKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGD 68
SQ GN ++++ H ++S +R ++T+++ QLL +D +RP FGG
Sbjct: 25 RSQAGNLQTKQVAKRHQDGWRRSPIYKRSPDMTKSLMTKSEQLLRIDDHDFTMRPAFGGP 84
Query: 69 PLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWV 127
P+ VG+D+ + S D+ISEV MD+T+T+YL YWKD+RL+F S+ ++ +T +KIWV
Sbjct: 85 PIPVGVDVQVESLDTISEVDMDFTMTLYLRHYWKDERLSFPSTNNQSMTFDSRLVKKIWV 144
Query: 128 PDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVE 187
PD FF + K SF+HD T N ++R+ DG++ Y +R T T C MDL +PLD Q C++E
Sbjct: 145 PDMFFVHSKRSFIHDTTTDNVMLRVYPDGNVLYSLRVTVTAMCNMDLSRFPLDTQTCSLE 204
Query: 188 IESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSF 244
IESY YT D+++YWK+ + + L QF I H T +TG Y RL + F
Sbjct: 205 IESYAYTDDDLMLYWKKGNESLNTDDRISLSQFLIQKFHTTTKLAFYSSTGWYNRLYIHF 264
Query: 245 KLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSL 304
L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+
Sbjct: 265 TLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASM 324
Query: 305 PRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
PR+SY+KA+DIYL + FVFVF +++EYAAVNY S +R ++K + + P G
Sbjct: 325 PRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLSTVQERKERKLRERLPCTCG 377
>gi|363732127|ref|XP_419839.3| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Gallus
gallus]
Length = 488
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 153/305 (50%), Positives = 209/305 (68%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S+ + +
Sbjct: 88 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTTNNSM 147
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y MR T T C MD
Sbjct: 148 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 207
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEKLA 233
+PLD+Q C++E+ESY YT D+++YWK ++ E+ L QF I T R +
Sbjct: 208 RFPLDSQTCSLELESYAYTDEDLMLYWKNGNESLKTDEKISLSQFLIQKFHTTSRLAFYS 267
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL +SF L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 268 STGWYNRLYISFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 327
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 328 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKF 387
Query: 352 PTPLG 356
P G
Sbjct: 388 PCTCG 392
>gi|8393403|ref|NP_058988.1| gamma-aminobutyric acid receptor subunit rho-2 precursor [Rattus
norvegicus]
gi|410516947|sp|P47742.3|GBRR2_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit rho-2;
AltName: Full=GABA(A) receptor subunit rho-2; AltName:
Full=GABA(C) receptor; Flags: Precursor
gi|559373|dbj|BAA07506.1| GABA-A receptor rho-2 subunit [Rattus norvegicus]
Length = 465
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 151/305 (49%), Positives = 210/305 (68%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YW+D+RLAF SS + +
Sbjct: 64 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSNRSM 123
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 124 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 183
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 184 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 243
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+H A ARV+LGI TVLT
Sbjct: 244 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLT 303
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY++A+DIYL + FVFVF ++LEYAAVNY + ++ ++K + K
Sbjct: 304 MSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQEQKERKLRDKF 363
Query: 352 PTPLG 356
P G
Sbjct: 364 PCTCG 368
>gi|301622061|ref|XP_002940361.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Xenopus (Silurana) tropicalis]
Length = 492
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 152/305 (49%), Positives = 209/305 (68%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F SS ++ +
Sbjct: 91 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSSTNKSM 150
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T +KIWVPD FF + K SF+HD T N ++R+ DG + Y MR T T C MD
Sbjct: 151 TFDSRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVYPDGHVLYSMRITVTAMCNMDFS 210
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEKLA 233
+PLD Q C++E+ESY YT D+++YWK+ ++ E+ L QF I T R +
Sbjct: 211 RFPLDTQTCSLELESYAYTDEDLMLYWKKGNESLKTDEKISLSQFLIQKFHTTSRLAFYS 270
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 271 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 330
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 331 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKMREKF 390
Query: 352 PTPLG 356
P G
Sbjct: 391 PCTCG 395
>gi|403261130|ref|XP_003922983.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Saimiri boliviensis boliviensis]
Length = 456
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 161/349 (46%), Positives = 224/349 (64%), Gaps = 11/349 (3%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYV 72
E ++ E + K S +R ++T++ QLL +D +RP FGG + V
Sbjct: 17 EGRVHWPGREVHEMSKKGSPILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPV 76
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTF 131
G+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD F
Sbjct: 77 GVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMF 136
Query: 132 FANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY 191
F + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY
Sbjct: 137 FVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESY 196
Query: 192 GYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQR 248
YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F L+R
Sbjct: 197 AYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRR 256
Query: 249 NIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS 308
+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+S
Sbjct: 257 HIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVS 316
Query: 309 YVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
Y+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 317 YIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 365
>gi|291396610|ref|XP_002714623.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Oryctolagus cuniculus]
Length = 479
Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 160/335 (47%), Positives = 221/335 (65%), Gaps = 12/335 (3%)
Query: 34 HKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISE 86
HK+ S +R ++T++ QLL +D +RP FGG + VG+D+ + S DSISE
Sbjct: 54 HKQGSPILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISE 113
Query: 87 VSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVTE 145
V MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 114 VDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTT 173
Query: 146 RNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE- 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 174 DNVMLRVQPDGRVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKG 233
Query: 205 -TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSI 262
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 234 NDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPAT 293
Query: 263 LIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 322
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + FV
Sbjct: 294 LMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFV 353
Query: 323 FVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
FVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 354 FVFLSVLEYAAVNYLTTVQERKERKLREKLPCTCG 388
>gi|149045578|gb|EDL98578.1| rCG55020, isoform CRA_a [Rattus norvegicus]
Length = 491
Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 151/305 (49%), Positives = 210/305 (68%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YW+D+RLAF SS + +
Sbjct: 90 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSNRSM 149
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 150 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 209
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 210 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 269
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+H A ARV+LGI TVLT
Sbjct: 270 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLT 329
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY++A+DIYL + FVFVF ++LEYAAVNY + ++ ++K + K
Sbjct: 330 MSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQEQKERKLRDKF 389
Query: 352 PTPLG 356
P G
Sbjct: 390 PCTCG 394
>gi|449265554|gb|EMC76734.1| Gamma-aminobutyric acid receptor subunit rho-2 [Columba livia]
Length = 464
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 222/333 (66%), Gaps = 10/333 (3%)
Query: 31 RLCHKKSATTERLANVTQTISQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVS 88
R+ +K + T+ T+ QLL +D +RP FGG + VG+D+ + S DSISEV
Sbjct: 39 RIYNKNNDVTKTWKGRTE---QLLRVDDHDFTMRPAFGGPAIPVGVDVQVESLDSISEVD 95
Query: 89 MDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERN 147
MD+T+T+YL YWKD+RL+F S+ ++ +T G +KIWVPD FF + K SF+HD T N
Sbjct: 96 MDFTMTLYLRHYWKDERLSFPSTTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDN 155
Query: 148 KLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--T 205
++R+ DG + Y MR T T C MD +PLD+Q C++E+ESY YT D+++YWK
Sbjct: 156 IMLRVFPDGHVLYSMRITVTAMCNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKNGNE 215
Query: 206 PVRGVEEAQLPQFTILGHETNDRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQTYLPSILI 264
++ E+ L QF I T R + TG Y RL ++F L+R+I +F+ QTY P+ L+
Sbjct: 216 SLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLM 275
Query: 265 VMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFV 324
VMLSWVSFWI+ A ARV+LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + FVFV
Sbjct: 276 VMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFV 335
Query: 325 FAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
F ++LEYAAVNY + +R ++K + + P G
Sbjct: 336 FLSVLEYAAVNYLTTVQERKERKLRERFPCTCG 368
>gi|432936632|ref|XP_004082202.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
isoform 1 [Oryzias latipes]
Length = 479
Score = 306 bits (785), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 159/339 (46%), Positives = 226/339 (66%), Gaps = 16/339 (4%)
Query: 23 GNSDSEKLRLCHKKSATTERLANVTQT----ISQLLH--GYDIRLRPNFGGDPLYVGMDL 76
G +D++K ++ ++ +VT++ QLL +D +RP FGG + VG+D+
Sbjct: 32 GTADTQK-----HSTSVVKKPPDVTKSRKTKTDQLLKVDDHDFTMRPAFGGPAIPVGVDV 86
Query: 77 TIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE-DEVLTLSGDFAEKIWVPDTFFAND 135
+ S DSISEV MD+T+T+YL YWKD+RL+FSS ++ +T G +KIWVPD FF +
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLSFSSSTNKSMTFDGRLVKKIWVPDVFFVHS 146
Query: 136 KNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTV 195
K SF+HD T N ++R+ DG + Y +R T T AC MD +PLD+Q C++E+ESY YT
Sbjct: 147 KRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCSLELESYAYTD 206
Query: 196 LDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA-TGTYQRLSLSFKLQRNIGY 252
D+++YWK + + + L QF I T R + TG Y RL ++F L+R+I +
Sbjct: 207 EDLMLYWKSGDESLSTDDRISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFF 266
Query: 253 FVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKA 312
F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLTM+TI TGV +S+PR+SY+KA
Sbjct: 267 FLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKA 326
Query: 313 IDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
+DIYL + FVFVF ++LEYAAVNY S DR ++K + +
Sbjct: 327 VDIYLWVSFVFVFLSVLEYAAVNYLSTVQDRRERKMRER 365
>gi|432936634|ref|XP_004082203.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
isoform 2 [Oryzias latipes]
Length = 481
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 159/339 (46%), Positives = 226/339 (66%), Gaps = 16/339 (4%)
Query: 23 GNSDSEKLRLCHKKSATTERLANVTQT----ISQLLH--GYDIRLRPNFGGDPLYVGMDL 76
G +D++K ++ ++ +VT++ QLL +D +RP FGG + VG+D+
Sbjct: 32 GTADTQK-----HSTSVVKKPPDVTKSRKTKTDQLLKVDDHDFTMRPAFGGPAIPVGVDV 86
Query: 77 TIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE-DEVLTLSGDFAEKIWVPDTFFAND 135
+ S DSISEV MD+T+T+YL YWKD+RL+FSS ++ +T G +KIWVPD FF +
Sbjct: 87 QVESLDSISEVDMDFTMTLYLRHYWKDERLSFSSSTNKSMTFDGRLVKKIWVPDVFFVHS 146
Query: 136 KNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTV 195
K SF+HD T N ++R+ DG + Y +R T T AC MD +PLD+Q C++E+ESY YT
Sbjct: 147 KRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAACNMDFSRFPLDSQTCSLELESYAYTD 206
Query: 196 LDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA-TGTYQRLSLSFKLQRNIGY 252
D+++YWK + + + L QF I T R + TG Y RL ++F L+R+I +
Sbjct: 207 EDLMLYWKSGDESLSTDDRISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFF 266
Query: 253 FVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKA 312
F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLTM+TI TGV +S+PR+SY+KA
Sbjct: 267 FLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKA 326
Query: 313 IDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
+DIYL + FVFVF ++LEYAAVNY S DR ++K + +
Sbjct: 327 VDIYLWVSFVFVFLSVLEYAAVNYLSTVQDRRERKMRER 365
>gi|194216257|ref|XP_001915973.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Equus
caballus]
Length = 492
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 210/312 (67%), Gaps = 7/312 (2%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
QLL +D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F
Sbjct: 79 QLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFP 138
Query: 110 SEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S + + +T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T
Sbjct: 139 SSNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTA 198
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HET 225
C MD +PLD Q C++EIESY YT D+++YWK+ ++ E L QF I H T
Sbjct: 199 MCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTT 258
Query: 226 NDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAL 285
+TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV L
Sbjct: 259 TKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPL 318
Query: 286 GITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAK 344
GITTVLTM+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R +
Sbjct: 319 GITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKE 378
Query: 345 KKPKAKEPTPLG 356
+K + K P G
Sbjct: 379 RKLREKLPCTCG 390
>gi|395849937|ref|XP_003797563.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Otolemur garnettii]
Length = 480
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/353 (46%), Positives = 226/353 (64%), Gaps = 16/353 (4%)
Query: 20 SQIGNSDSEKLRLCH-----KKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGD 68
S+ G+ + R H + S +R ++T++ QLL +D +RP FGG
Sbjct: 37 SKKGSRPQRQRREVHEDAHMRGSPILKRSPDITKSPLMKSEQLLRIDDHDFSMRPGFGGP 96
Query: 69 PLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWV 127
+ VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF S + + +T G +KIWV
Sbjct: 97 AIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTNNLSMTFDGRLVKKIWV 156
Query: 128 PDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVE 187
PD FF + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++E
Sbjct: 157 PDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLE 216
Query: 188 IESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSF 244
IESY YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F
Sbjct: 217 IESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINF 276
Query: 245 KLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSL 304
L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+
Sbjct: 277 TLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASM 336
Query: 305 PRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 337 PRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCAGG 389
>gi|296198769|ref|XP_002746860.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1
[Callithrix jacchus]
Length = 474
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 160/336 (47%), Positives = 221/336 (65%), Gaps = 12/336 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S +R ++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 48 AHKQVSPILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 107
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 108 EVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 167
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 168 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKK 227
Query: 205 --TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 228 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 287
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 288 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 347
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
VFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 348 VFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 383
>gi|348563379|ref|XP_003467485.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Cavia porcellus]
Length = 474
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/353 (45%), Positives = 226/353 (64%), Gaps = 16/353 (4%)
Query: 20 SQIGNSDSEKLRLCH-----KKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGD 68
S+ G+ + R H + S +R ++T++ QLL +D +RP FGG
Sbjct: 31 SKKGSRPQRQRREVHEDANKQGSPILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGP 90
Query: 69 PLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWV 127
+ VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G +KIWV
Sbjct: 91 AIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWV 150
Query: 128 PDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVE 187
PD FF + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++E
Sbjct: 151 PDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLE 210
Query: 188 IESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSF 244
IESY YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F
Sbjct: 211 IESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINF 270
Query: 245 KLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSL 304
L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+
Sbjct: 271 TLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASM 330
Query: 305 PRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 331 PRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLRDKLPCTCG 383
>gi|426257416|ref|XP_004022323.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Ovis
aries]
Length = 642
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 137/309 (44%), Positives = 215/309 (69%), Gaps = 2/309 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
A V + + ++L YD RLRPNFGG P+ VG+ + ++S + ISEV+MDYTI M+ +Q WKD
Sbjct: 57 ATVHKILDRVLSNYDGRLRPNFGGTPVPVGVSIYVSSIEQISEVTMDYTIRMFFHQTWKD 116
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RLA+ + LTL EK+WVPD +F N K +F+HD T N++ +L+ DG++ YG+R
Sbjct: 117 PRLAYHETNLNLTLDYRLLEKLWVPDCYFLNSKEAFVHDATVENRVFQLHPDGTVRYGIR 176
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTIL 221
TTT AC M+L +PLD Q C +E+ESYGYTV D+++YW+ + V+G E+ +PQF+ L
Sbjct: 177 LTTTAACSMNLEKFPLDKQTCKLEVESYGYTVDDILLYWEGSGNAVQGTEKLHIPQFSFL 236
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G + ++ TG+Y RL L F ++R + ++ Q Y PSIL ++SW+SFW+N+E+++A
Sbjct: 237 GKTISTKEVFFYTGSYVRLILRFLVKREVTGYLVQIYWPSILTTVVSWISFWMNYESSAA 296
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD 341
RV +G+T++L + +I++ +R+ P+ S +KAIDIY+V+CF FVF +L+EY +NY ++
Sbjct: 297 RVTVGLTSMLILNSINSHLRNKFPQFSCIKAIDIYMVVCFFFVFLSLVEYVYINYLFYNR 356
Query: 342 RAKKKPKAK 350
R + + +
Sbjct: 357 RGSRHSRRQ 365
>gi|403261132|ref|XP_003922984.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Saimiri boliviensis boliviensis]
Length = 473
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 160/336 (47%), Positives = 221/336 (65%), Gaps = 12/336 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S +R ++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 47 AHKQVSPILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 106
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 107 EVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 166
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 167 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKK 226
Query: 205 --TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 227 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 286
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 287 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 346
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
VFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 347 VFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 382
>gi|194097386|ref|NP_002033.2| gamma-aminobutyric acid receptor subunit rho-1 isoform a precursor
[Homo sapiens]
gi|223590210|sp|P24046.2|GBRR1_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit rho-1;
AltName: Full=GABA(A) receptor subunit rho-1; AltName:
Full=GABA(C) receptor; Flags: Precursor
gi|119568943|gb|EAW48558.1| gamma-aminobutyric acid (GABA) receptor, rho 1 [Homo sapiens]
Length = 479
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 160/336 (47%), Positives = 220/336 (65%), Gaps = 12/336 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S R ++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 53 AHKQVSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 112
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 113 EVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 172
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 173 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKK 232
Query: 205 --TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 233 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 292
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 293 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 352
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
VFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 353 VFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 388
>gi|426353968|ref|XP_004044444.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Gorilla gorilla gorilla]
Length = 479
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/336 (47%), Positives = 220/336 (65%), Gaps = 12/336 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S R ++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 53 AHKQVSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 112
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 113 EVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 172
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 173 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKK 232
Query: 205 --TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 233 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 292
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 293 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 352
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
VFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 353 VFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 388
>gi|351699565|gb|EHB02484.1| Gamma-aminobutyric acid receptor subunit rho-1 [Heterocephalus
glaber]
Length = 477
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/305 (49%), Positives = 207/305 (67%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-L 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +
Sbjct: 84 HDFSMRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSM 143
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T C MD
Sbjct: 144 TFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFS 203
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKL 232
+PLD Q C++EIESY YT D+++YWK+ ++ E L QF I H T
Sbjct: 204 RFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYS 263
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
+TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLT
Sbjct: 264 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLT 323
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 324 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKL 383
Query: 352 PTPLG 356
P G
Sbjct: 384 PCTCG 388
>gi|332218463|ref|XP_003258374.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Nomascus leucogenys]
Length = 479
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/336 (47%), Positives = 220/336 (65%), Gaps = 12/336 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S R ++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 53 AHKQVSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 112
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 113 EVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 172
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 173 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKK 232
Query: 205 --TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 233 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 292
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 293 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 352
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
VFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 353 VFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 388
>gi|10048422|ref|NP_065234.1| gamma-aminobutyric acid receptor subunit theta precursor [Mus
musculus]
gi|13959379|sp|Q9JLF1.1|GBRT_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit theta;
AltName: Full=GABA(A) receptor subunit theta; Flags:
Precursor
gi|7861738|gb|AAF70381.1|AF189260_1 GABA-A receptor theta subunit [Mus musculus]
gi|111600476|gb|AAI19077.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit theta [Mus
musculus]
gi|111601080|gb|AAI19075.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit theta [Mus
musculus]
Length = 638
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 217/312 (69%), Gaps = 7/312 (2%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
A V + + ++L YD+RLRPNFGG P+ V + + ++S + ISE++MDYTITM+L+Q WKD
Sbjct: 57 AVVQKILDRVLSTYDVRLRPNFGGAPVPVSVSIYVSSIEQISEINMDYTITMFLHQTWKD 116
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RLA+ + LTL EK+WVPD +F N K++F+HDVT N++ +L+ DG++ YG+R
Sbjct: 117 TRLAYYETNLNLTLDYRMHEKLWVPDCYFVNSKDAFVHDVTVENRVFQLHPDGTVRYGIR 176
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILG 222
TTT AC +DL +P+D Q+C +E+ESYGYTV D+V+ W+ + + + +PQ+T LG
Sbjct: 177 LTTTAACSLDLQKFPMDKQSCKLEVESYGYTVEDIVLSWEDDNAIHITDGLHIPQYTYLG 236
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
++ TG+Y RL + F++QR + ++ Q Y P++L +LSW+SFW+N+++++AR
Sbjct: 237 RTITSKEVYFYTGSYMRLIVKFQVQREVRSYLVQVYWPTVLTTILSWISFWMNYDSSAAR 296
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD- 341
V +G+T++L +TTI + +R LP IS +KAIDIY+++C FVF +LLEY +NY +++
Sbjct: 297 VTIGLTSILVLTTIDSHMRDKLPHISCIKAIDIYILVCLFFVFLSLLEYVYINYLFFSQV 356
Query: 342 -----RAKKKPK 348
R +KP+
Sbjct: 357 PRRNHRRCRKPR 368
>gi|355561901|gb|EHH18533.1| hypothetical protein EGK_15159 [Macaca mulatta]
gi|355757708|gb|EHH61233.1| hypothetical protein EGM_19192 [Macaca fascicularis]
Length = 479
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/336 (47%), Positives = 220/336 (65%), Gaps = 12/336 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S R ++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 53 AHKQISPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 112
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 113 EVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 172
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 173 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKK 232
Query: 205 --TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 233 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 292
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 293 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 352
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
VFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 353 VFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 388
>gi|332824524|ref|XP_527447.3| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Pan troglodytes]
Length = 479
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/336 (47%), Positives = 220/336 (65%), Gaps = 12/336 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S R ++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 53 AHKQVSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 112
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 113 EVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 172
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 173 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKK 232
Query: 205 --TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 233 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 292
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 293 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 352
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
VFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 353 VFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 388
>gi|297291317|ref|XP_001095237.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Macaca mulatta]
gi|402867630|ref|XP_003897944.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Papio anubis]
Length = 480
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/336 (47%), Positives = 220/336 (65%), Gaps = 12/336 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S R ++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 54 AHKQISPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 113
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 114 EVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 173
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 174 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKK 233
Query: 205 --TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 234 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 293
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 294 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 353
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
VFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 354 VFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 389
>gi|344264639|ref|XP_003404399.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Loxodonta africana]
Length = 491
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/308 (50%), Positives = 209/308 (67%), Gaps = 11/308 (3%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF S+ ++ +
Sbjct: 90 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSM 149
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 150 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 209
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 210 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 269
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 270 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 329
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY----SYWADRAKKKPK 348
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY W +R K +
Sbjct: 330 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQEWKER---KLQ 386
Query: 349 AKEPTPLG 356
K P G
Sbjct: 387 DKFPCTCG 394
>gi|47215100|emb|CAF98174.1| unnamed protein product [Tetraodon nigroviridis]
Length = 445
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/299 (50%), Positives = 208/299 (69%), Gaps = 5/299 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F SS ++ +
Sbjct: 32 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFRSSTNKSM 91
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T AC MD
Sbjct: 92 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAACNMDFS 151
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
+PLD+Q CT+E+ESY YT D+++YWK + + + L QF I T R +
Sbjct: 152 RFPLDSQTCTLELESYAYTDEDLMLYWKSGDDSLSIDDRISLSQFLIQKFHTTSRLAFYS 211
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 212 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 271
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY S DR ++K + +
Sbjct: 272 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLSTVHDRRERKMRER 330
>gi|2565315|gb|AAB81965.1| gamma-aminobutyric acid receptor rho2 subunit [Mus musculus]
Length = 465
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/284 (51%), Positives = 201/284 (70%), Gaps = 4/284 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF SS ++ +
Sbjct: 64 HDFTMRPAFGGPAIPVGVDVQVESVDSISEVDMDFTMTLYLKHYWKDERLAFPSSSNKSM 123
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+ D T N ++R+ DG + Y MR T T C MD
Sbjct: 124 TFDGRLVKKIWVPDVFFVHSKRSFIQDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 183
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 184 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 243
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+H A ARV+LGI TVLT
Sbjct: 244 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLT 303
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
M+TI TGV +S+PR+SY++A+DIYL + FVFVF ++LEYAAVNY
Sbjct: 304 MSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVLEYAAVNY 347
>gi|182911|gb|AAA52509.1| gamma-aminobutyric acid receptor type A rho-1 subunit [Homo
sapiens]
Length = 473
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/336 (47%), Positives = 220/336 (65%), Gaps = 12/336 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S R ++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 47 AHKQVSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 106
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 107 EVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 166
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 167 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKK 226
Query: 205 --TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 227 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 286
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 287 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 346
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
VFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 347 VFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 382
>gi|120659826|gb|AAI30345.1| Gamma-aminobutyric acid (GABA) receptor, rho 1 [Homo sapiens]
gi|313883058|gb|ADR83015.1| Unknown protein [synthetic construct]
Length = 474
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/336 (47%), Positives = 220/336 (65%), Gaps = 12/336 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S R ++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 48 AHKQVSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 107
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 108 EVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 167
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 168 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKK 227
Query: 205 --TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 228 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 287
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 288 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 347
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
VFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 348 VFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 383
>gi|345778210|ref|XP_539038.3| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-1 [Canis lupus familiaris]
Length = 479
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/305 (49%), Positives = 207/305 (67%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-L 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +
Sbjct: 84 HDFSMRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSM 143
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T C MD
Sbjct: 144 TFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFS 203
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKL 232
+PLD Q C++EIESY YT D+++YWK+ ++ E L QF I H T
Sbjct: 204 RFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYS 263
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
+TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLT
Sbjct: 264 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLT 323
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 324 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLRDKL 383
Query: 352 PTPLG 356
P G
Sbjct: 384 PCTCG 388
>gi|326916211|ref|XP_003204403.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like,
partial [Meleagris gallopavo]
Length = 437
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 159/332 (47%), Positives = 220/332 (66%), Gaps = 12/332 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S +R ++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 13 AHKQGSPILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 72
Query: 86 EVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S+ ++ +T G +KIWVPD FF + K SF+HD T
Sbjct: 73 EVDMDFTMTLYLRHYWKDERLSFPSTNNQSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 132
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK
Sbjct: 133 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKN 192
Query: 205 --TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 193 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 252
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 253 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 312
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAKEP 352
VFVF ++LEYAAVNY + +R ++K + K P
Sbjct: 313 VFVFLSVLEYAAVNYLTTVQERKERKLRDKLP 344
>gi|4336684|gb|AAD17893.1| gamma-aminobutyric-acid receptor rho-2A subunit precursor [Morone
americana]
Length = 479
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/299 (50%), Positives = 208/299 (69%), Gaps = 5/299 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F SS ++ +
Sbjct: 67 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFTSSTNKSM 126
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T AC MD
Sbjct: 127 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAACNMDFS 186
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
+PLD+Q C++E+ESY YT D+++YWK + + + L QF I T R +
Sbjct: 187 RFPLDSQTCSLELESYAYTDEDLMLYWKSGDESLSTDDRISLSQFLIQKFHTTSRLAFYS 246
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 247 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 306
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY S DR ++K + +
Sbjct: 307 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLSTVQDRRERKMRER 365
>gi|354466065|ref|XP_003495496.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2
[Cricetulus griseus]
Length = 490
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/305 (48%), Positives = 210/305 (68%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YW+D+RLAF S+ ++ +
Sbjct: 89 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSTSNKSM 148
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 149 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 208
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ ++ L QF I T R +
Sbjct: 209 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDDKISLSQFLIQKFHTTSRLAFYS 268
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L R+I +F+ QTY P+ L+VMLSWVSFWI+H A ARV+LGI TVLT
Sbjct: 269 STGWYNRLYINFTLHRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLT 328
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY++A+DIYL + FVFVF ++LEYAAVNY + ++ ++K + K
Sbjct: 329 MSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVLEYAAVNYLTTMQEQKERKFREKF 388
Query: 352 PTPLG 356
P G
Sbjct: 389 PCMCG 393
>gi|397504694|ref|XP_003822918.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Pan paniscus]
Length = 480
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 159/336 (47%), Positives = 220/336 (65%), Gaps = 12/336 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S R ++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 54 AHKQVSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 113
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 114 EVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 173
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 174 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKK 233
Query: 205 --TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 234 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 293
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+D+YL + F
Sbjct: 294 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDVYLWVSF 353
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
VFVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 354 VFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 389
>gi|118088822|ref|XP_426190.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Gallus
gallus]
Length = 478
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 159/332 (47%), Positives = 220/332 (66%), Gaps = 12/332 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S +R ++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 54 AHKQGSPILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 113
Query: 86 EVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S+ ++ +T G +KIWVPD FF + K SF+HD T
Sbjct: 114 EVDMDFTMTLYLRHYWKDERLSFPSTNNQSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 173
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK
Sbjct: 174 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKN 233
Query: 205 --TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 234 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 293
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 294 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 353
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAKEP 352
VFVF ++LEYAAVNY + +R ++K + K P
Sbjct: 354 VFVFLSVLEYAAVNYLTTVQERKERKLRDKLP 385
>gi|449265555|gb|EMC76735.1| Gamma-aminobutyric acid receptor subunit rho-1 [Columba livia]
Length = 472
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 159/332 (47%), Positives = 220/332 (66%), Gaps = 12/332 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S +R ++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 48 AHKQGSPILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 107
Query: 86 EVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S+ ++ +T G +KIWVPD FF + K SF+HD T
Sbjct: 108 EVDMDFTMTLYLRHYWKDERLSFPSTNNQSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 167
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK
Sbjct: 168 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKN 227
Query: 205 --TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 228 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 287
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 288 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 347
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAKEP 352
VFVF ++LEYAAVNY + +R ++K + K P
Sbjct: 348 VFVFLSVLEYAAVNYLTTVQERKERKLRDKLP 379
>gi|149638872|ref|XP_001510986.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Ornithorhynchus anatinus]
Length = 473
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/305 (49%), Positives = 207/305 (67%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD RL+F S+ ++ +
Sbjct: 79 HDFSMRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDQRLSFPSTNNQSM 138
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T C MD
Sbjct: 139 TFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGQVLYSLRVTVTAMCNMDFS 198
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKL 232
+PLD Q C++EIESY YT D+++YWK+ ++ E L QF I H T
Sbjct: 199 RFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYS 258
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
+TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLT
Sbjct: 259 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLT 318
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + +
Sbjct: 319 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLRDRL 378
Query: 352 PTPLG 356
P G
Sbjct: 379 PCACG 383
>gi|449497856|ref|XP_004174280.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-2 [Taeniopygia guttata]
Length = 464
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/284 (51%), Positives = 201/284 (70%), Gaps = 4/284 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S+ ++ +
Sbjct: 64 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNKSM 123
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y MR T T C MD
Sbjct: 124 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRVTVTAMCNMDFS 183
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK ++ E+ L QF I T R +
Sbjct: 184 HFPLDSQTCSLELESYAYTDEDLMLYWKNGNESLKTDEKNSLSQFLIQKFHTTSRLAFYS 243
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 244 STGWYNRLYINFTLRRHIFFFLLQTYFPASLMVMLSWVSFWIDRRAVPARVSLGITTVLT 303
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY
Sbjct: 304 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNY 347
>gi|395534596|ref|XP_003769326.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Sarcophilus harrisii]
Length = 455
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 156/328 (47%), Positives = 215/328 (65%), Gaps = 10/328 (3%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYV 72
E ++ E + K S+ +R ++T++ QLL +D +RP FGG + V
Sbjct: 17 EGRVHWQGREIQEVIKKGSSILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPV 76
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTF 131
G+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD F
Sbjct: 77 GVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMF 136
Query: 132 FANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY 191
F + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY
Sbjct: 137 FVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESY 196
Query: 192 GYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQR 248
YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F L+R
Sbjct: 197 AYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRR 256
Query: 249 NIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS 308
+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+S
Sbjct: 257 HIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVS 316
Query: 309 YVKAIDIYLVMCFVFVFAALLEYAAVNY 336
Y+KA+DIYL + FVFVF ++LEYAAVNY
Sbjct: 317 YIKAVDIYLWVSFVFVFLSVLEYAAVNY 344
>gi|344299196|ref|XP_003421273.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta
[Loxodonta africana]
Length = 625
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 142/307 (46%), Positives = 216/307 (70%), Gaps = 4/307 (1%)
Query: 36 KSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITM 95
K+ +E +A+ + + ++L GYD+RLRPNFGGDP+ VG+ + I+S + ISE++MDYTITM
Sbjct: 50 KNCASEAVAH--KVLDRVLTGYDVRLRPNFGGDPVPVGISIYISSIEQISEINMDYTITM 107
Query: 96 YLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGD 155
+ +Q WKD RLA+ + LTL K+WVPD +F N ++F HDVT ++ +L D
Sbjct: 108 FFHQTWKDPRLAYHETNLNLTLDYRMLNKLWVPDCYFLNSTDTFAHDVTVEKRVFQLQPD 167
Query: 156 GSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEA 213
G++ YG+R TTT AC +DL +PLD Q C +EIESYGYTV DV+++W++ + G E+
Sbjct: 168 GTVRYGIRLTTTAACSLDLQKFPLDKQACKLEIESYGYTVEDVILFWEDDGNAIHGTEDL 227
Query: 214 QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFW 273
+PQF+ LG + TG+Y RL L F++QR + F+ Q Y P++L +LSW+SFW
Sbjct: 228 HVPQFSFLGKTITSTEVYFYTGSYMRLILRFEVQREVSSFLVQVYWPTVLTTVLSWMSFW 287
Query: 274 INHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAA 333
+N ++ +ARV +G+T++L +TTIS+ VR+ LP++ VKAIDIY+++CF FVF +L+EY
Sbjct: 288 MNCDSAAARVTVGLTSMLILTTISSHVRNKLPQVPCVKAIDIYIIVCFFFVFFSLMEYVY 347
Query: 334 VNYSYWA 340
+NY +++
Sbjct: 348 INYLFYS 354
>gi|348543733|ref|XP_003459337.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Oreochromis niloticus]
Length = 480
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 151/299 (50%), Positives = 208/299 (69%), Gaps = 5/299 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F SS ++ +
Sbjct: 67 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFTSSTNKSM 126
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T AC MD
Sbjct: 127 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAACNMDFS 186
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
+PLD+Q C++E+ESY YT D+++YWK + + + L QF I T R +
Sbjct: 187 RFPLDSQTCSLELESYAYTDEDLMLYWKSGDESLSIDDRISLSQFLIQKFHTTSRLAFYS 246
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 247 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 306
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY S DR ++K + +
Sbjct: 307 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLSTVQDRRERKMRER 365
>gi|426397781|ref|XP_004065084.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Gorilla
gorilla gorilla]
Length = 632
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 145/334 (43%), Positives = 222/334 (66%), Gaps = 9/334 (2%)
Query: 9 IPDFNSENELESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGD 68
IP F+ E S + D L L + K+ E A V + + ++L YD+RLRPNFGG
Sbjct: 29 IPKFHFE--FSSAVPEVD---LNLFNCKNCANE--AVVQKILDRVLSRYDVRLRPNFGGA 81
Query: 69 PLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVP 128
P+ V + + + S + ISE++MDYTITM+ +Q WKD RLA+ LTL EK+WVP
Sbjct: 82 PVPVRISIYVTSIEQISEMNMDYTITMFFHQTWKDSRLAYYETTLNLTLDYRMHEKLWVP 141
Query: 129 DTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEI 188
D +F N K++F+HDVT N++ +L+ DG++ YG+R TTT AC +DLH +P+D Q C + +
Sbjct: 142 DCYFLNSKDAFVHDVTVENRVFQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNLVV 201
Query: 189 ESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKL 246
ESYGYTV D++++W + + EE +PQFT LG ++ TG+Y RL L F++
Sbjct: 202 ESYGYTVEDIILFWDDNGNAIHVTEELHIPQFTFLGRTITSKEVYFYTGSYIRLILKFQV 261
Query: 247 QRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPR 306
QR + ++ Q Y P++L + SW+SFW+N+++++ARV +G+T++L +TTI + +R LP
Sbjct: 262 QREVNSYLVQVYWPTVLTTITSWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKLPN 321
Query: 307 ISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
IS +KAIDIY+++C FVF +LLEY +NY +++
Sbjct: 322 ISCIKAIDIYILVCLFFVFLSLLEYVYINYLFYS 355
>gi|126310323|ref|XP_001367190.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1
[Monodelphis domestica]
Length = 473
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 159/335 (47%), Positives = 221/335 (65%), Gaps = 12/335 (3%)
Query: 34 HKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISE 86
HK+ S +R ++T++ QLL +D +RP FGG + VG+D+ + S DSISE
Sbjct: 49 HKQGSLILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISE 108
Query: 87 VSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVTE 145
V MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 109 VDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTT 168
Query: 146 RNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE- 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 169 DNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKG 228
Query: 205 -TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSI 262
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 229 NDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPAT 288
Query: 263 LIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 322
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + FV
Sbjct: 289 LMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWISFV 348
Query: 323 FVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
FVF ++LEYAAVNY + +R +++ + K P G
Sbjct: 349 FVFLSVLEYAAVNYLTTVQERKERELQDKLPCTCG 383
>gi|791209|gb|AAA87730.1| GABA rho subunit [Rattus norvegicus]
gi|1183939|emb|CAA64832.1| GABA rho-1 subunit [Rattus norvegicus]
Length = 474
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 158/330 (47%), Positives = 220/330 (66%), Gaps = 12/330 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S +R +++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 48 AHKQGSPILKRSSDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 107
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 108 EVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 167
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 168 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKK 227
Query: 205 --TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 228 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 287
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 288 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 347
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
VFVF ++LEYAAVNY + +R ++K + K
Sbjct: 348 VFVFLSVLEYAAVNYLTTVQERKERKLREK 377
>gi|395534594|ref|XP_003769325.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Sarcophilus harrisii]
Length = 473
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 155/314 (49%), Positives = 212/314 (67%), Gaps = 11/314 (3%)
Query: 34 HKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISE 86
HK+ S+ +R ++T++ QLL +D +RP FGG + VG+D+ + S DSISE
Sbjct: 49 HKQGSSILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISE 108
Query: 87 VSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVTE 145
V MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 109 VDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTT 168
Query: 146 RNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE- 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 169 DNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKG 228
Query: 205 -TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSI 262
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 229 NDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPAT 288
Query: 263 LIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 322
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + FV
Sbjct: 289 LMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFV 348
Query: 323 FVFAALLEYAAVNY 336
FVF ++LEYAAVNY
Sbjct: 349 FVFLSVLEYAAVNY 362
>gi|354466063|ref|XP_003495495.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Cricetulus griseus]
Length = 475
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 160/347 (46%), Positives = 225/347 (64%), Gaps = 16/347 (4%)
Query: 20 SQIGNSDSEKLRLCH-----KKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGD 68
S+ G+ + R H + S +R +++T++ QLL +D +RP FGG
Sbjct: 37 SRKGSRPQRQRRGAHDDANKQGSPILKRSSDITKSPLTKSEQLLRIDDHDFSMRPGFGGP 96
Query: 69 PLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWV 127
+ VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G +KIWV
Sbjct: 97 AIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWV 156
Query: 128 PDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVE 187
PD FF + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++E
Sbjct: 157 PDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLE 216
Query: 188 IESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSF 244
IESY YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F
Sbjct: 217 IESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINF 276
Query: 245 KLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSL 304
L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+
Sbjct: 277 TLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASM 336
Query: 305 PRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 337 PRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREK 383
>gi|223590212|sp|P50572.2|GBRR1_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit rho-1;
AltName: Full=GABA(A) receptor subunit rho-1; AltName:
Full=GABA(C) receptor; Flags: Precursor
gi|149045581|gb|EDL98581.1| rCG55101 [Rattus norvegicus]
Length = 480
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 158/330 (47%), Positives = 220/330 (66%), Gaps = 12/330 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S +R +++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 54 AHKQGSPILKRSSDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 113
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 114 EVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 173
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 174 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKK 233
Query: 205 --TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 234 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 293
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 294 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 353
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
VFVF ++LEYAAVNY + +R ++K + K
Sbjct: 354 VFVFLSVLEYAAVNYLTTVQERKERKLREK 383
>gi|402534543|ref|NP_058987.2| gamma-aminobutyric acid receptor subunit rho-1 precursor [Rattus
norvegicus]
Length = 480
Score = 303 bits (776), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 160/347 (46%), Positives = 225/347 (64%), Gaps = 16/347 (4%)
Query: 20 SQIGNSDSEKLRLCH-----KKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGD 68
S+ G+ + R H + S +R +++T++ QLL +D +RP FGG
Sbjct: 37 SKKGSRPQRQRRGAHDDAHKQGSPILKRSSDITKSPLTKSEQLLRIDDHDFSMRPGFGGP 96
Query: 69 PLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWV 127
+ VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G +KIWV
Sbjct: 97 AIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWV 156
Query: 128 PDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVE 187
PD FF + K SF+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++E
Sbjct: 157 PDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLE 216
Query: 188 IESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSF 244
IESY YT D+++YWK+ ++ E L QF I H T +TG Y RL ++F
Sbjct: 217 IESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINF 276
Query: 245 KLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSL 304
L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+
Sbjct: 277 TLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASM 336
Query: 305 PRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 337 PRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREK 383
>gi|327261555|ref|XP_003215595.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Anolis carolinensis]
Length = 489
Score = 303 bits (776), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 151/305 (49%), Positives = 207/305 (67%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE-DEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S ++ +
Sbjct: 89 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSHMNKSM 148
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y MR T T C MD
Sbjct: 149 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 208
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEKLA 233
+PLD Q CT+E+ESY YT D+++YWK ++ E+ L QF I T R +
Sbjct: 209 RFPLDTQTCTLELESYAYTDEDLMLYWKNGNESLKTDEKISLSQFLIQKFHTTSRLAFYS 268
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 269 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 328
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF +++EYAAVNY + +R ++K + K
Sbjct: 329 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLTTVQERKQRKLRDKF 388
Query: 352 PTPLG 356
G
Sbjct: 389 SCTCG 393
>gi|402691983|ref|NP_032101.3| gamma-aminobutyric acid receptor subunit rho-1 precursor [Mus
musculus]
gi|223590211|sp|P56475.2|GBRR1_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit rho-1;
AltName: Full=GABA(A) receptor subunit rho-1; AltName:
Full=GABA(C) receptor; Flags: Precursor
Length = 480
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 158/330 (47%), Positives = 219/330 (66%), Gaps = 12/330 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S R +++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 54 AHKQGSPILRRSSDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 113
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 114 EVDMDFTMTLYLRHYWKDERLSFPSSNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 173
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 174 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKK 233
Query: 205 T--PVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 234 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 293
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 294 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 353
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
VFVF ++LEYAAVNY + +R ++K + K
Sbjct: 354 VFVFLSVLEYAAVNYLTTVQERKERKLREK 383
>gi|402911768|ref|XP_003918478.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Papio
anubis]
Length = 632
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 214/313 (68%), Gaps = 4/313 (1%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + K+ E A V + + ++L YD+RLRPNFGG P+ V + + + S + ISE++M
Sbjct: 45 LNLFNCKNCANE--AVVQKILDRVLSRYDVRLRPNFGGAPVPVRISIYVTSIEQISEMNM 102
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM+ +Q WKD RLA+ LTL EK+WVPD +F N K++F+HDVT N++
Sbjct: 103 DYTITMFFHQTWKDSRLAYYETTLNLTLDYRMHEKLWVPDCYFLNSKDAFVHDVTVENRV 162
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPV 207
+L+ DG++ YG+R TTT AC +DLH +P+D Q C + +ESYGYTV D++++W + +
Sbjct: 163 FQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNLVVESYGYTVEDIILFWDDNGNAI 222
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
EE +PQFT LG ++ TG+Y RL L F++QR + ++ Q Y P++L +
Sbjct: 223 HMTEELHIPQFTFLGRTITSKEVYFYTGSYIRLILKFQVQREVNSYLVQVYWPTVLTTIT 282
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SW+SFW+N+++++ARV +G+T++L +TTI + +R LP IS +KAIDIY+++C FVF +
Sbjct: 283 SWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKLPNISCIKAIDIYILVCLFFVFLS 342
Query: 328 LLEYAAVNYSYWA 340
LLEY +NY +++
Sbjct: 343 LLEYVYINYLFYS 355
>gi|224048437|ref|XP_002198040.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1
[Taeniopygia guttata]
Length = 478
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 157/331 (47%), Positives = 216/331 (65%), Gaps = 11/331 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S +R ++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 54 AHKQGSPILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 113
Query: 86 EVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S+ ++ +T G +KIWVPD FF + K SF+HD T
Sbjct: 114 EVDMDFTMTLYLRHYWKDERLSFPSTNNQSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 173
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK
Sbjct: 174 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKN 233
Query: 205 --TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 234 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 293
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 294 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 353
Query: 322 VFVFAALLEYAAVNYSYWADRAKKKPKAKEP 352
VFVF ++LEYAAVNY K++ +P
Sbjct: 354 VFVFLSVLEYAAVNYLTTVQERKERKLRDKP 384
>gi|380795453|gb|AFE69602.1| gamma-aminobutyric acid receptor subunit theta precursor, partial
[Macaca mulatta]
Length = 631
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 214/313 (68%), Gaps = 4/313 (1%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + K+ E A V + + ++L YD+RLRPNFGG P+ V + + + S + ISE++M
Sbjct: 44 LNLFNCKNCANE--AVVQKILDRVLSRYDVRLRPNFGGAPVPVRISIYVTSIEQISEMNM 101
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM+ +Q WKD RLA+ LTL EK+WVPD +F N K++F+HDVT N++
Sbjct: 102 DYTITMFFHQTWKDSRLAYYETTLNLTLDYRMHEKLWVPDCYFLNSKDAFVHDVTVENRV 161
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPV 207
+L+ DG++ YG+R TTT AC +DLH +P+D Q C + +ESYGYTV D++++W + +
Sbjct: 162 FQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNLVVESYGYTVEDIILFWDDNGNAI 221
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
EE +PQFT LG ++ TG+Y RL L F++QR + ++ Q Y P++L +
Sbjct: 222 HMTEELHIPQFTFLGRTITSKEVYFYTGSYIRLILKFQVQREVNSYLVQVYWPTVLTTIT 281
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SW+SFW+N+++++ARV +G+T++L +TTI + +R LP IS +KAIDIY+++C FVF +
Sbjct: 282 SWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKLPNISCIKAIDIYILVCLFFVFLS 341
Query: 328 LLEYAAVNYSYWA 340
LLEY +NY +++
Sbjct: 342 LLEYVYINYLFYS 354
>gi|5764187|gb|AAD51172.1|AF144648_1 GABA-A receptor theta [Homo sapiens]
Length = 627
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 214/313 (68%), Gaps = 4/313 (1%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + K+ E A V + + ++L YD+RLRPNFGG P+ V + + + S + ISE++M
Sbjct: 40 LNLFNCKNCANE--AVVQKILDRVLSRYDVRLRPNFGGAPVPVRISIYVTSIEQISEMNM 97
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM+ +Q WKD RLA+ LTL EK+WVPD +F N K++F+HDVT N++
Sbjct: 98 DYTITMFFHQTWKDSRLAYYETTLNLTLDYRMHEKLWVPDCYFLNSKDAFVHDVTVENRV 157
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPV 207
+L+ DG++ YG+R TTT AC +DLH +P+D Q C + +ESYGYTV D++++W + +
Sbjct: 158 FQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNLVVESYGYTVEDIILFWDDNGNAI 217
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
EE +PQFT LG ++ TG+Y RL L F++QR + ++ Q Y P++L +
Sbjct: 218 HMTEELHIPQFTFLGRTITSKEVYFYTGSYIRLILKFQVQREVNSYLVQVYWPTVLTTIT 277
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SW+SFW+N+++++ARV +G+T++L +TTI + +R LP IS +KAIDIY+++C FVF +
Sbjct: 278 SWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKLPNISCIKAIDIYILVCLFFVFLS 337
Query: 328 LLEYAAVNYSYWA 340
LLEY +NY +++
Sbjct: 338 LLEYVYINYLFYS 350
>gi|109132628|ref|XP_001093973.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Macaca
mulatta]
gi|355705252|gb|EHH31177.1| hypothetical protein EGK_21056 [Macaca mulatta]
gi|355757791|gb|EHH61316.1| hypothetical protein EGM_19303 [Macaca fascicularis]
Length = 632
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 214/313 (68%), Gaps = 4/313 (1%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + K+ E A V + + ++L YD+RLRPNFGG P+ V + + + S + ISE++M
Sbjct: 45 LNLFNCKNCANE--AVVQKILDRVLSRYDVRLRPNFGGAPVPVRISIYVTSIEQISEMNM 102
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM+ +Q WKD RLA+ LTL EK+WVPD +F N K++F+HDVT N++
Sbjct: 103 DYTITMFFHQTWKDSRLAYYETTLNLTLDYRMHEKLWVPDCYFLNSKDAFVHDVTVENRV 162
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPV 207
+L+ DG++ YG+R TTT AC +DLH +P+D Q C + +ESYGYTV D++++W + +
Sbjct: 163 FQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNLVVESYGYTVEDIILFWDDNGNAI 222
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
EE +PQFT LG ++ TG+Y RL L F++QR + ++ Q Y P++L +
Sbjct: 223 HMTEELHIPQFTFLGRTITSKEVYFYTGSYIRLILKFQVQREVNSYLVQVYWPTVLTTIT 282
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SW+SFW+N+++++ARV +G+T++L +TTI + +R LP IS +KAIDIY+++C FVF +
Sbjct: 283 SWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKLPNISCIKAIDIYILVCLFFVFLS 342
Query: 328 LLEYAAVNYSYWA 340
LLEY +NY +++
Sbjct: 343 LLEYVYINYLFYS 355
>gi|2565313|gb|AAB81964.1| gamma-aminobutyric acid receptor rho1 subunit [Mus musculus]
Length = 474
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 158/330 (47%), Positives = 219/330 (66%), Gaps = 12/330 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S R +++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 48 AHKQGSPILRRSSDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 107
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 108 EVDMDFTMTLYLRHYWKDERLSFPSSNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 167
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 168 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKK 227
Query: 205 T--PVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 228 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 287
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 288 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 347
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
VFVF ++LEYAAVNY + +R ++K + K
Sbjct: 348 VFVFLSVLEYAAVNYLTTVQERKERKLREK 377
>gi|7861736|gb|AAF70380.1|AF189259_1 GABA-A receptor theta subunit [Homo sapiens]
gi|80476592|gb|AAI09212.1| Gamma-aminobutyric acid (GABA) receptor, theta [Homo sapiens]
gi|80479041|gb|AAI09211.1| Gamma-aminobutyric acid (GABA) receptor, theta [Homo sapiens]
Length = 632
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 214/313 (68%), Gaps = 4/313 (1%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + K+ E A V + + ++L YD+RLRPNFGG P+ V + + + S + ISE++M
Sbjct: 45 LNLFNCKNCANE--AVVQKILDRVLSRYDVRLRPNFGGAPVPVRISIYVTSIEQISEMNM 102
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM+ +Q WKD RLA+ LTL EK+WVPD +F N K++F+HDVT N++
Sbjct: 103 DYTITMFFHQTWKDSRLAYYETTLNLTLDYRMHEKLWVPDCYFLNSKDAFVHDVTVENRV 162
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPV 207
+L+ DG++ YG+R TTT AC +DLH +P+D Q C + +ESYGYTV D++++W + +
Sbjct: 163 FQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNLVVESYGYTVEDIILFWDDNGNAI 222
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
EE +PQFT LG ++ TG+Y RL L F++QR + ++ Q Y P++L +
Sbjct: 223 HMTEELHIPQFTFLGRTITSKEVYFYTGSYIRLILKFQVQREVNSYLVQVYWPTVLTTIT 282
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SW+SFW+N+++++ARV +G+T++L +TTI + +R LP IS +KAIDIY+++C FVF +
Sbjct: 283 SWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKLPNISCIKAIDIYILVCLFFVFLS 342
Query: 328 LLEYAAVNYSYWA 340
LLEY +NY +++
Sbjct: 343 LLEYVYINYLFYS 355
>gi|148673542|gb|EDL05489.1| mCG12769 [Mus musculus]
Length = 474
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 158/330 (47%), Positives = 219/330 (66%), Gaps = 12/330 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S R +++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 48 AHKQGSPILRRSSDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 107
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
EV MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 108 EVDMDFTMTLYLRHYWKDERLSFPSSNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTT 167
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 168 TDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKK 227
Query: 205 T--PVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 228 GNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPA 287
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + F
Sbjct: 288 TLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSF 347
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
VFVF ++LEYAAVNY + +R ++K + K
Sbjct: 348 VFVFLSVLEYAAVNYLTTVQERKERKLREK 377
>gi|268838843|ref|NP_061028.2| gamma-aminobutyric acid receptor subunit theta precursor [Homo
sapiens]
gi|13959382|sp|Q9UN88.2|GBRT_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit theta;
AltName: Full=GABA(A) receptor subunit theta; Flags:
Precursor
gi|119619830|gb|EAW99424.1| gamma-aminobutyric acid (GABA) receptor, theta [Homo sapiens]
Length = 632
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 214/313 (68%), Gaps = 4/313 (1%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + K+ E A V + + ++L YD+RLRPNFGG P+ V + + + S + ISE++M
Sbjct: 45 LNLFNCKNCANE--AVVQKILDRVLSRYDVRLRPNFGGAPVPVRISIYVTSIEQISEMNM 102
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM+ +Q WKD RLA+ LTL EK+WVPD +F N K++F+HDVT N++
Sbjct: 103 DYTITMFFHQTWKDSRLAYYETTLNLTLDYRMHEKLWVPDCYFLNSKDAFVHDVTVENRV 162
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPV 207
+L+ DG++ YG+R TTT AC +DLH +P+D Q C + +ESYGYTV D++++W + +
Sbjct: 163 FQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNLVVESYGYTVEDIILFWDDNGNAI 222
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
EE +PQFT LG ++ TG+Y RL L F++QR + ++ Q Y P++L +
Sbjct: 223 HMTEELHIPQFTFLGRTITSKEVYFYTGSYIRLILKFQVQREVNSYLVQVYWPTVLTTIT 282
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SW+SFW+N+++++ARV +G+T++L +TTI + +R LP IS +KAIDIY+++C FVF +
Sbjct: 283 SWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKLPNISCIKAIDIYILVCLFFVFLS 342
Query: 328 LLEYAAVNYSYWA 340
LLEY +NY +++
Sbjct: 343 LLEYVYINYLFYS 355
>gi|410959654|ref|XP_003986418.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Felis catus]
Length = 392
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/301 (50%), Positives = 205/301 (68%), Gaps = 5/301 (1%)
Query: 61 LRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSG 119
+RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G
Sbjct: 1 MRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDG 60
Query: 120 DFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPL 179
+KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T C MD +PL
Sbjct: 61 RLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPL 120
Query: 180 DNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGT 236
D Q C++EIESY YT D+++YWK+ ++ E L QF I H T +TG
Sbjct: 121 DTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGW 180
Query: 237 YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTI 296
Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI
Sbjct: 181 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 240
Query: 297 STGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPL 355
TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P
Sbjct: 241 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREKLPCTC 300
Query: 356 G 356
G
Sbjct: 301 G 301
>gi|332861892|ref|XP_001136669.2| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Pan
troglodytes]
Length = 632
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 214/313 (68%), Gaps = 4/313 (1%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + K+ E A V + + ++L YD+RLRPNFGG P+ V + + + S + ISE++M
Sbjct: 45 LNLFNCKNCANE--AVVQKILDRVLSRYDVRLRPNFGGAPVPVRISIYVTSIEQISEMNM 102
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM+ +Q WKD RLA+ LTL EK+WVPD +F N K++F+HDVT N++
Sbjct: 103 DYTITMFFHQTWKDSRLAYYETTLNLTLDYRMHEKLWVPDCYFLNSKDAFVHDVTVENRV 162
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPV 207
+L+ DG++ YG+R TTT AC +DLH +P+D Q C + +ESYGYTV D++++W + +
Sbjct: 163 FQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNLVVESYGYTVEDIILFWDDNGNAI 222
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
EE +PQFT LG ++ TG+Y RL L F++QR + ++ Q Y P++L +
Sbjct: 223 HMTEELHIPQFTFLGRTITSKEVYFYTGSYIRLILKFQVQREVNSYLVQVYWPTVLTTIT 282
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SW+SFW+N+++++ARV +G+T++L +TTI + +R LP IS +KAIDIY+++C FVF +
Sbjct: 283 SWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKLPNISCIKAIDIYILVCLFFVFLS 342
Query: 328 LLEYAAVNYSYWA 340
LLEY +NY +++
Sbjct: 343 LLEYVYINYLFYS 355
>gi|395849982|ref|XP_003797583.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-2 [Otolemur garnettii]
Length = 509
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 153/308 (49%), Positives = 208/308 (67%), Gaps = 11/308 (3%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF S+ ++ +
Sbjct: 108 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSM 167
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 168 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 227
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 228 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 287
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGI TVLT
Sbjct: 288 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDCRAVPARVSLGIMTVLT 347
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY----SYWADRAKKKPK 348
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY W +R K +
Sbjct: 348 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQEWKER---KLR 404
Query: 349 AKEPTPLG 356
K P G
Sbjct: 405 EKFPCVCG 412
>gi|397465571|ref|XP_003804564.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Pan
paniscus]
Length = 632
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 214/313 (68%), Gaps = 4/313 (1%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + K+ E A V + + ++L YD+RLRPNFGG P+ V + + + S + ISE++M
Sbjct: 45 LNLFNCKNCANE--AVVQKILDRVLSRYDVRLRPNFGGAPVPVRISIYVTSIEQISEMNM 102
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM+ +Q WKD RLA+ LTL EK+WVPD +F N K++F+HDVT N++
Sbjct: 103 DYTITMFFHQTWKDSRLAYYETTLNLTLDYRMHEKLWVPDCYFLNSKDAFVHDVTVENRV 162
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPV 207
+L+ DG++ YG+R TTT AC +DLH +P+D Q C + +ESYGYTV D++++W + +
Sbjct: 163 FQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNLVVESYGYTVEDIILFWDDNGNAI 222
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
EE +PQFT LG ++ TG+Y RL L F++QR + ++ Q Y P++L +
Sbjct: 223 HMTEELHIPQFTFLGRTITSKEVYFYTGSYIRLILKFQVQREVNSYLVQVYWPTVLTTIT 282
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SW+SFW+N+++++ARV +G+T++L +TTI + +R LP IS +KAIDIY+++C FVF +
Sbjct: 283 SWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKLPNISCIKAIDIYILVCLFFVFLS 342
Query: 328 LLEYAAVNYSYWA 340
LLEY +NY +++
Sbjct: 343 LLEYVYINYLFYS 355
>gi|403261134|ref|XP_003922985.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Saimiri boliviensis boliviensis]
gi|403261136|ref|XP_003922986.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Saimiri boliviensis boliviensis]
Length = 392
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/301 (50%), Positives = 205/301 (68%), Gaps = 5/301 (1%)
Query: 61 LRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSG 119
+RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G
Sbjct: 1 MRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDG 60
Query: 120 DFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPL 179
+KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T C MD +PL
Sbjct: 61 RLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPL 120
Query: 180 DNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGT 236
D Q C++EIESY YT D+++YWK+ ++ E L QF I H T +TG
Sbjct: 121 DTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGW 180
Query: 237 YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTI 296
Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI
Sbjct: 181 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 240
Query: 297 STGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPL 355
TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P
Sbjct: 241 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTS 300
Query: 356 G 356
G
Sbjct: 301 G 301
>gi|410898114|ref|XP_003962543.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-1-like [Takifugu rubripes]
Length = 476
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/357 (45%), Positives = 229/357 (64%), Gaps = 20/357 (5%)
Query: 20 SQIGNSDSEKL---------RLCHKKSATTERLANVTQTI----SQLLH--GYDIRLRPN 64
SQ G+ +E++ R S +R ++T+++ QLL +D +RP
Sbjct: 26 SQAGDLHAEQIXKGGQDGSGRQSQIGSPIYKRSPDMTKSLMTKSEQLLRIDDHDFTMRPA 85
Query: 65 FGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAE 123
FGG P+ VG+D+ + S D+ISEV MD+T+T+YL YWKD+RL+F S+ ++ +T +
Sbjct: 86 FGGPPIPVGVDVQVESLDTISEVDMDFTMTLYLRHYWKDERLSFQSTNNQSMTFDSRLVK 145
Query: 124 KIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQN 183
KIWVPD FF + K SF+HD T N ++R+ DG++ Y +R T T C MDL +PLD Q
Sbjct: 146 KIWVPDMFFVHSKRSFIHDTTTDNVMLRVYPDGNVLYSLRVTVTAMCNMDLSRFPLDTQT 205
Query: 184 CTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRL 240
C++EIESY YT D+++YWK+ + + L QF I H T +TG Y RL
Sbjct: 206 CSLEIESYAYTDDDLMLYWKKGNESLNTDDRISLSQFLIQKFHTTTKLAFYSSTGWYNRL 265
Query: 241 SLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGV 300
+ F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV
Sbjct: 266 YIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGV 325
Query: 301 RSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
+S+PR+SY+KA+DIYL + FVFVF +++EYAAVNY S +R ++K + + P G
Sbjct: 326 NASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLSTVQERKERKLRERLPCTCG 382
>gi|348518730|ref|XP_003446884.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Oreochromis niloticus]
Length = 470
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 160/348 (45%), Positives = 225/348 (64%), Gaps = 8/348 (2%)
Query: 13 NSENELESQIGNSDSEK----LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGD 68
N E +G + +K + L KK +T+ L ++ + ++ +D +RP FGG
Sbjct: 29 NKRRNKEMYVGENARQKHGGRVDLKMKKLDSTKSLLIKSEQLLRI-EDHDFAMRPGFGGS 87
Query: 69 PLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWV 127
L VG+D+ + S DSISEV+MD+T+T+YL YW+DDRLAF SS ++ T +KIWV
Sbjct: 88 ALPVGIDVQVESIDSISEVNMDFTMTLYLRHYWQDDRLAFPSSNNKSRTFDARLVKKIWV 147
Query: 128 PDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVE 187
PD FF + K SF+HD T N ++R+ DG+I Y +R T T C MD +PLD QNC++E
Sbjct: 148 PDVFFVHSKRSFIHDTTMENIMLRVYPDGNILYSVRITVTALCSMDFSSFPLDTQNCSLE 207
Query: 188 IESYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTILGHETN-DRKEKLATGTYQRLSLSFK 245
+ESY Y D+++YWK +E L QF I + + +TG Y RL ++F
Sbjct: 208 LESYAYNENDLMLYWKNGNDSLRTDEIVLSQFFIEDFQPSFGLAFYSSTGWYNRLYINFI 267
Query: 246 LQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLP 305
L+R+I +F+ QTY P++L+VMLSWVSFWI+ A ARV+LGITTVLTM+TI TGV +S+P
Sbjct: 268 LRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVSASMP 327
Query: 306 RISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPT 353
++SYVKA+DIYL F+FVF +++EYAAVNY + KK +AK PT
Sbjct: 328 QVSYVKAVDIYLWASFLFVFLSVIEYAAVNYFTTVEEMKKLKRAKMPT 375
>gi|297291321|ref|XP_002803871.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Macaca mulatta]
gi|332218467|ref|XP_003258376.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Nomascus leucogenys]
gi|332218469|ref|XP_003258377.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Nomascus leucogenys]
gi|402867634|ref|XP_003897946.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Papio anubis]
gi|402867636|ref|XP_003897947.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Papio anubis]
gi|426353970|ref|XP_004044445.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Gorilla gorilla gorilla]
gi|426353972|ref|XP_004044446.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Gorilla gorilla gorilla]
Length = 392
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/301 (50%), Positives = 205/301 (68%), Gaps = 5/301 (1%)
Query: 61 LRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSG 119
+RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G
Sbjct: 1 MRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDG 60
Query: 120 DFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPL 179
+KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T C MD +PL
Sbjct: 61 RLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPL 120
Query: 180 DNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGT 236
D Q C++EIESY YT D+++YWK+ ++ E L QF I H T +TG
Sbjct: 121 DTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGW 180
Query: 237 YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTI 296
Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI
Sbjct: 181 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 240
Query: 297 STGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPL 355
TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P
Sbjct: 241 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTS 300
Query: 356 G 356
G
Sbjct: 301 G 301
>gi|332824528|ref|XP_003311431.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Pan
troglodytes]
gi|332824530|ref|XP_003311432.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Pan
troglodytes]
Length = 392
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/301 (50%), Positives = 205/301 (68%), Gaps = 5/301 (1%)
Query: 61 LRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSG 119
+RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G
Sbjct: 1 MRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDG 60
Query: 120 DFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPL 179
+KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T C MD +PL
Sbjct: 61 RLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPL 120
Query: 180 DNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGT 236
D Q C++EIESY YT D+++YWK+ ++ E L QF I H T +TG
Sbjct: 121 DTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGW 180
Query: 237 YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTI 296
Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI
Sbjct: 181 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 240
Query: 297 STGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPL 355
TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P
Sbjct: 241 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTS 300
Query: 356 G 356
G
Sbjct: 301 G 301
>gi|375493572|ref|NP_001243633.1| gamma-aminobutyric acid receptor subunit rho-1 isoform c [Homo
sapiens]
gi|389886549|ref|NP_001254511.1| gamma-aminobutyric acid receptor subunit rho-1 isoform c [Homo
sapiens]
Length = 392
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/301 (50%), Positives = 205/301 (68%), Gaps = 5/301 (1%)
Query: 61 LRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSG 119
+RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G
Sbjct: 1 MRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDG 60
Query: 120 DFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPL 179
+KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T C MD +PL
Sbjct: 61 RLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPL 120
Query: 180 DNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGT 236
D Q C++EIESY YT D+++YWK+ ++ E L QF I H T +TG
Sbjct: 121 DTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGW 180
Query: 237 YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTI 296
Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI
Sbjct: 181 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 240
Query: 297 STGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPL 355
TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P
Sbjct: 241 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTS 300
Query: 356 G 356
G
Sbjct: 301 G 301
>gi|194386474|dbj|BAG61047.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/301 (50%), Positives = 205/301 (68%), Gaps = 5/301 (1%)
Query: 61 LRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSG 119
+RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G
Sbjct: 1 MRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDG 60
Query: 120 DFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPL 179
+KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T C MD +PL
Sbjct: 61 RLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPL 120
Query: 180 DNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGT 236
D Q C++EIESY YT D+++YWK+ ++ E L QF I H T +TG
Sbjct: 121 DTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGW 180
Query: 237 YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTI 296
Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI
Sbjct: 181 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 240
Query: 297 STGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPL 355
TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K P
Sbjct: 241 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTS 300
Query: 356 G 356
G
Sbjct: 301 G 301
>gi|449485790|ref|XP_002190704.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3
[Taeniopygia guttata]
Length = 469
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 226/354 (63%), Gaps = 28/354 (7%)
Query: 22 IGNSDSEKLRLCHKKSATTERLANVTQTIS---------------QLLH--GYDIRLRPN 64
+ +S S+ RL ++ + R N + I QLLH +D LRP
Sbjct: 19 LHSSHSQHHRLHRRQPVSFSRKHNSKREIKMRKLDSTKVRPLKSEQLLHIEDHDFALRPG 78
Query: 65 FGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAE 123
FGG P+ VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S++++ +T G +
Sbjct: 79 FGGSPIPVGIDVQVESIDSISEVDMDFTMTLYLRHYWKDERLSFRSNKNKSMTFDGRLIK 138
Query: 124 KIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQN 183
KIWVPD FF + K SF+HD T N ++R+ DG++ + +R T + C MD +PLD QN
Sbjct: 139 KIWVPDVFFVHSKRSFIHDTTVENIMLRVYPDGNVLFSLRITVSAMCFMDFSRFPLDTQN 198
Query: 184 CTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEKLA----TGTY 237
C++E+ESY Y D+++YWK + E L QF I E LA TG Y
Sbjct: 199 CSLELESYAYNEDDLMLYWKHGNKSLSTDEHISLSQFFI---EEFSASSGLAFYSSTGWY 255
Query: 238 QRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTIS 297
RL ++F L+R+I +FV Q+Y P++L+VMLSWVSFWI+ A ARV+LGITTVLTM+TI
Sbjct: 256 NRLFINFALRRHIFFFVLQSYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIM 315
Query: 298 TGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
TGV +S+P++SY+KA+D+YL + F+FVF +++EYAAVNY + +R + K + K
Sbjct: 316 TGVSASMPQVSYIKAVDVYLWISFLFVFLSVIEYAAVNYLTTIEERKQLKKRGK 369
>gi|2317700|gb|AAB66600.1| gamma-aminobutyric-acid receptor rho-2B subunit [Morone americana]
Length = 473
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/284 (52%), Positives = 199/284 (70%), Gaps = 4/284 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP F G + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF SS ++ +
Sbjct: 67 HDFTMRPAFAGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSSTNKSM 126
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T AC MD
Sbjct: 127 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAACNMDFS 186
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
+PLD+Q CT+E+ESY YT D+++YWK + + + L QF I T R +
Sbjct: 187 RFPLDSQTCTLELESYAYTDEDLMLYWKSGDESLSTDDRISLSQFLIQKFHTTSRLAFYS 246
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 247 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 306
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY
Sbjct: 307 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNY 350
>gi|20750089|gb|AAM23270.1| glycine-gated ion channel alpha3 subunit [Morone americana]
Length = 440
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/303 (49%), Positives = 210/303 (69%), Gaps = 9/303 (2%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 28 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYAEYPDDS 87
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 88 LDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 147
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E PV+ E LPQF IL E++ R +
Sbjct: 148 KNFPMDVQTCIMQLESFGYTMNDLIFEWQENGPVQVAEGLTLPQF-ILKDESDLRYCTKH 206
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 207 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 266
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD----RAKKKP 347
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+ R ++ P
Sbjct: 267 TMTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRPP 326
Query: 348 KAK 350
K+K
Sbjct: 327 KSK 329
>gi|18026851|gb|AAL55656.1|AF228915_1 GABA receptor rho-1 subunit [Takifugu rubripes]
Length = 480
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/305 (49%), Positives = 208/305 (68%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG P+ VG+D+ + S D+ISEV MD+T+T+YL YWKD+RL+F S+ ++ +
Sbjct: 82 HDFTMRPAFGGPPIPVGVDVQVESLDTISEVDMDFTMTLYLRHYWKDERLSFQSTNNQSM 141
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T +KIWVPD FF + K SF+HD T N ++R+ DG++ Y +R T T C MDL
Sbjct: 142 TFDSRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVYPDGNVLYSLRVTVTAMCNMDLS 201
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKL 232
+PLD Q C++EIESY YT D+++YWK+ + + L QF I H T
Sbjct: 202 RFPLDTQTCSLEIESYAYTDDDLMLYWKKGNESLNTDDRISLSQFLIQKFHTTTKLAFYS 261
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
+TG Y RL + F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLT
Sbjct: 262 STGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLT 321
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF +++EYAAVNY S +R ++K + +
Sbjct: 322 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLSTVQERKERKLRERL 381
Query: 352 PTPLG 356
P G
Sbjct: 382 PCTCG 386
>gi|4336688|gb|AAD17895.1| gamma-aminobutyric-acid receptor rho-1B subunit precursor [Morone
americana]
Length = 466
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/308 (49%), Positives = 207/308 (67%), Gaps = 5/308 (1%)
Query: 54 LHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSED 112
+ +D +RP FGG + VG+D+ + S D+ISEV MD+T+T+YL YWKD+RL+F S+ +
Sbjct: 71 IEDHDFTMRPGFGGPAVPVGVDVQVESLDAISEVDMDFTMTLYLRHYWKDERLSFRSNTN 130
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ +T +KIWVPD FF + K SF HD T N ++R+ DG + Y +R T T C M
Sbjct: 131 QSMTFDSRLVKKIWVPDMFFVHSKKSFTHDTTTDNVMLRVYPDGKVLYSLRVTVTAMCSM 190
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRK 229
DL +PLD Q C++EIESY YT D+++YWKE + E L QF I H T
Sbjct: 191 DLSRFPLDTQTCSLEIESYAYTDDDLMLYWKEGNRSLNTDERISLSQFLIWEFHTTTKLA 250
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITT
Sbjct: 251 FYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITT 310
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPK 348
VLTM+TI TGV +S+PR+SY+KA+DIYL + FVFVF +++EYAAVNY S +R ++K +
Sbjct: 311 VLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLSTLQERKERKLR 370
Query: 349 AKEPTPLG 356
+ P G
Sbjct: 371 ERLPCTCG 378
>gi|194044856|ref|XP_001927219.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Sus
scrofa]
Length = 644
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/332 (43%), Positives = 225/332 (67%), Gaps = 5/332 (1%)
Query: 11 DFNSENELESQIGNSDSEK-LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDP 69
DF+S + ++ ++ E L L K+ E A V + + ++L YD+RLRPNFGG P
Sbjct: 25 DFSSTPKFHFELSSTVPEVVLDLFSCKNCANE--AVVHKILDRVLSKYDVRLRPNFGGAP 82
Query: 70 LYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPD 129
+ VG+ + ++S + ISE++MDYTITM+ +Q WKD RLA+ + LTL EK+WVPD
Sbjct: 83 VPVGVSIYVSSIEQISEMTMDYTITMFFHQTWKDPRLAYYETNLNLTLDYRMLEKLWVPD 142
Query: 130 TFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIE 189
+F N K++F+HDVT N++ +L DG++ YG+R TTT AC M+L +PLD Q C +E+E
Sbjct: 143 CYFLNSKDAFVHDVTVENRVFQLQPDGTVRYGIRLTTTAACSMNLQNFPLDKQTCKLEVE 202
Query: 190 SYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQ 247
SYGYTV D+++YW+ ++G E+ +PQF+ LG ++ TG+Y RL L F ++
Sbjct: 203 SYGYTVEDILLYWEGNGNAIQGTEKLHIPQFSFLGKTMTSKEVFFYTGSYVRLILRFLVK 262
Query: 248 RNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRI 307
R I ++ Q Y P++L ++SW+SFW+N+E ++ARV +G+T++L + I++ + LP+I
Sbjct: 263 REIISYLVQIYWPTVLTTVVSWISFWMNYECSAARVTVGLTSMLILNAINSHLWDKLPQI 322
Query: 308 SYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
+ +KAIDIY+V+CF FVF +L+EY +NY ++
Sbjct: 323 ACIKAIDIYMVVCFFFVFLSLMEYIYINYLFY 354
>gi|255069726|ref|NP_001020724.1| gamma-aminobutyric acid receptor subunit rho-1 precursor [Danio
rerio]
Length = 466
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/309 (48%), Positives = 211/309 (68%), Gaps = 6/309 (1%)
Query: 54 LHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSED 112
L +D +RP FGG + VG+D+ + S D+ISEV MD+T+T+YL YWKD RL+F S+ +
Sbjct: 66 LDDHDFTMRPGFGGPAIPVGVDVQLESLDTISEVDMDFTMTLYLRHYWKDARLSFPSNTN 125
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ +T G +KIWVPD FF + K SF+HD T N ++R++ DG + Y +R T T C M
Sbjct: 126 QSMTFDGRLVKKIWVPDIFFVHSKRSFIHDTTTENVMLRVHPDGKVLYSLRVTVTSMCNM 185
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRK 229
DL ++PLD Q C++EIESY YT D+++YWK ++ ++ L QF I H T
Sbjct: 186 DLSHFPLDTQTCSLEIESYAYTDDDLMLYWKRGNKSLQTDDKISLSQFLIQEFHTTTKLA 245
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITT
Sbjct: 246 FYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITT 305
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPK 348
VLTM+TI TGV +S+PR+SY+KA+DIYL + FVFVF +++EYAAVNY S +R ++
Sbjct: 306 VLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLSTLQERKERSQN 365
Query: 349 AKE-PTPLG 356
+++ P G
Sbjct: 366 SRQLPCTCG 374
>gi|432952216|ref|XP_004085005.1| PREDICTED: glycine receptor subunit alpha-3-like [Oryzias latipes]
Length = 620
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 203/285 (71%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 217 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYAEYPDDS 276
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 277 LDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 336
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E PV+ E LPQF IL E++ R +
Sbjct: 337 KNFPMDVQTCIMQLESFGYTMNDLIFQWQENGPVQVAEGLTLPQF-ILKDESDLRYCTKH 395
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 396 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 455
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 456 TMTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 500
>gi|397504698|ref|XP_003822920.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Pan paniscus]
gi|397504700|ref|XP_003822921.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Pan paniscus]
Length = 392
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/301 (49%), Positives = 205/301 (68%), Gaps = 5/301 (1%)
Query: 61 LRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSG 119
+RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G
Sbjct: 1 MRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDG 60
Query: 120 DFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPL 179
+KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T C MD +PL
Sbjct: 61 RLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPL 120
Query: 180 DNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGT 236
D Q C++EIESY YT D+++YWK+ ++ E L QF I H T +TG
Sbjct: 121 DTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGW 180
Query: 237 YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTI 296
Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI
Sbjct: 181 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 240
Query: 297 STGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPL 355
TGV +S+PR+SY+KA+D+YL + FVFVF ++LEYAAVNY + +R ++K + K P
Sbjct: 241 ITGVNASMPRVSYIKAVDVYLWVSFVFVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTS 300
Query: 356 G 356
G
Sbjct: 301 G 301
>gi|403305830|ref|XP_003943455.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Saimiri
boliviensis boliviensis]
Length = 625
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 140/313 (44%), Positives = 212/313 (67%), Gaps = 4/313 (1%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + KS E A V + + ++L YD+RLRPNFGG P+ V + + + S + ISEV+M
Sbjct: 45 LNLFNCKSCANE--AVVQKILDRVLSRYDVRLRPNFGGAPVPVRISIYVTSIEQISEVNM 102
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM+ +Q WKD RLA+ LTL EK+WVPD +F N K+ F+HDVT N++
Sbjct: 103 DYTITMFFHQTWKDSRLAYYETTLNLTLDYRMHEKLWVPDCYFLNSKDGFVHDVTVENRV 162
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPV 207
+L+ DG + YG++ TTT AC +DLH +P+D Q C + +ESYGYTV D++++W + V
Sbjct: 163 FQLHPDGVVRYGIQLTTTAACSLDLHKFPMDKQACKLVVESYGYTVEDIILFWDDNGNAV 222
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
+E +PQFT LG ++ TG+Y RL L F++QR + ++ Q Y P++L +
Sbjct: 223 HMTKELHIPQFTFLGRTITSKEVYFYTGSYIRLILKFQVQREVNSYLVQVYWPTVLTTIT 282
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SW+SFW+N+++++ARV +G+T++L +TTI + +R LP IS +KAIDIY+++C FVF +
Sbjct: 283 SWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKLPNISCIKAIDIYILVCLFFVFLS 342
Query: 328 LLEYAAVNYSYWA 340
LLEY +NY +++
Sbjct: 343 LLEYVYINYLFYS 355
>gi|431838151|gb|ELK00083.1| Gamma-aminobutyric acid receptor subunit rho-2 [Pteropus alecto]
Length = 460
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 211/314 (67%), Gaps = 14/314 (4%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF S+ ++ +
Sbjct: 50 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSASNKSM 109
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 110 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 169
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKL- 232
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R
Sbjct: 170 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 229
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAL------- 285
+TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+L
Sbjct: 230 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLAAELKLD 289
Query: 286 --GITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADR 342
GITTVLTM+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R
Sbjct: 290 VAGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQER 349
Query: 343 AKKKPKAKEPTPLG 356
++K + K P G
Sbjct: 350 KERKLREKFPCMCG 363
>gi|334331046|ref|XP_001371691.2| PREDICTED: glycine receptor subunit alpha-3 [Monodelphis domestica]
Length = 477
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 152/328 (46%), Positives = 219/328 (66%), Gaps = 9/328 (2%)
Query: 13 NSENELESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYV 72
N EN+L+S + +++ R + ++ L + S GYD R+RPNF G P+ V
Sbjct: 29 NIENDLKSLVATKETDSARSRSTPMSPSDFLDKLMGRTS----GYDARIRPNFKGPPVNV 84
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTF 131
++ I SF SI+E +MDY + ++L Q W D RLA+S D+ L L + IW PD F
Sbjct: 85 TCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLF 144
Query: 132 FANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY 191
FAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL +P+D Q C +++ES+
Sbjct: 145 FANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDVQTCIMQLESF 204
Query: 192 GYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQR 248
GYT+ D++ W+ E PV+ E LPQF +L E + R + TG + + + F L+R
Sbjct: 205 GYTMNDLIFQWQDEAPVQVAEGLTLPQF-VLKEEKDLRYCTKHYNTGKFTCIEVRFHLER 263
Query: 249 NIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS 308
+GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVLTMTT S+G R+SLP++S
Sbjct: 264 QMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVS 323
Query: 309 YVKAIDIYLVMCFVFVFAALLEYAAVNY 336
YVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 324 YVKAIDIWMAVCLLFVFSALLEYAAVNF 351
>gi|301779952|ref|XP_002925393.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2
[Ailuropoda melanoleuca]
Length = 452
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|344288591|ref|XP_003416031.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Loxodonta
africana]
Length = 452
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|256682095|gb|ACV07674.1| GABA gated chloride channel [Rhipicephalus microplus]
Length = 537
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/306 (48%), Positives = 209/306 (68%), Gaps = 5/306 (1%)
Query: 36 KSATTERLANVTQTISQLL-HGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTIT 94
+ T+R N+TQ ++ GYD R+RPN+GG P+ VG+ + I S ++SEV MD+T
Sbjct: 33 RPGQTQRGQNITQILNAFFTRGYDRRVRPNYGGVPVEVGVTMQIISISTVSEVQMDFTSD 92
Query: 95 MYLNQYWKDDRLAF--SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
Y Q W+D+RL+F S + E +T+ + AE+IWVPDTFFAN+K+++ H T N +R+
Sbjct: 93 FYFRQSWRDERLSFQKSPDLESMTVGAEVAERIWVPDTFFANEKSAYFHAATTPNTFLRI 152
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGV 210
G + +R T T +C MDL Y+P+D Q CT+EIES+GYT+ D+ W + T VR
Sbjct: 153 GSGGEVFRSIRLTVTASCPMDLRYFPMDRQACTIEIESFGYTMKDIRYRWSDGDTSVRIA 212
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+E +LPQF +LGH ++ L TG Y RL + R++GY++ Q Y+P+ LIV++SWV
Sbjct: 213 KEVELPQFKVLGHVQKAKEVALTTGNYSRLVCEIRFARSMGYYLIQIYIPAGLIVVISWV 272
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFW++ A+ ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VF ALLE
Sbjct: 273 SFWLHRNASPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFTALLE 332
Query: 331 YAAVNY 336
YAAV Y
Sbjct: 333 YAAVGY 338
>gi|300798570|ref|NP_001179843.1| glycine receptor subunit alpha-2 precursor [Bos taurus]
gi|296470482|tpg|DAA12597.1| TPA: glycine receptor, alpha 2-like isoform 1 [Bos taurus]
Length = 452
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|403255310|ref|XP_003920384.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 452
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|291221981|ref|XP_002730997.1| PREDICTED: glycine receptor, alpha 2-like [Saccoglossus
kowalevskii]
Length = 437
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 212/326 (65%), Gaps = 13/326 (3%)
Query: 38 ATTERLANVTQT-------ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMD 90
A+ + AN+TQ + L YD+R+RPNF G P+ V D+ ++S DS+ E +M
Sbjct: 20 ASIQSAANMTQDERKQSEFLDNLFRNYDLRIRPNFNGPPVEVITDMFVSSMDSVQETTMS 79
Query: 91 YTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLV 150
YT+ +++ Q W D RL+F+ + +++ ++W PD FF N+K ++ HDVT NKL+
Sbjct: 80 YTMDIFMRQQWNDPRLSFTEYNHSVSVHTQLLNRMWFPDLFFPNEKRAYQHDVTTDNKLL 139
Query: 151 RLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRG 209
RL +G I Y +R TL CMM L +P+D Q C V+ ESYG+T D++ W++ P++
Sbjct: 140 RLFPNGDILYSVRLLLTLTCMMSLQKFPMDRQQCAVQCESYGFTTKDLLFKWRDVEPIQR 199
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
QLPQF I+G T ++ TG Y + F + R +GY++ QTY+PS+LIV+LSW
Sbjct: 200 DSNLQLPQFDIVGTRTLLCTKQYNTGNYTCVEGRFIMTRQMGYYMIQTYIPSMLIVILSW 259
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWI+ E++ ARVALGITTVLTMTT S+G +LP++SYVKAIDI++ +C +FVFAAL+
Sbjct: 260 VSFWISAESSPARVALGITTVLTMTTQSSGANETLPKVSYVKAIDIWMAVCLLFVFAALV 319
Query: 330 EYAAVNYSYW-----ADRAKKKPKAK 350
E+AA NY ADR K++ + K
Sbjct: 320 EFAAANYKSRKKIGKADRQKRQKENK 345
>gi|426256678|ref|XP_004021964.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Ovis aries]
Length = 452
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|395837964|ref|XP_003791898.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Otolemur
garnettii]
Length = 453
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|296234942|ref|XP_002762679.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Callithrix
jacchus]
Length = 452
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|432936828|ref|XP_004082299.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Oryzias latipes]
Length = 455
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/305 (49%), Positives = 208/305 (68%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG P+ VG+D+ + S D+ISEV MD+T+T+YL YWKD+RL+F S+ ++ +
Sbjct: 57 HDFTMRPAFGGPPIPVGVDVQVESLDTISEVDMDFTMTLYLRHYWKDERLSFPSTNNQSM 116
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T +KIWVPD FF + K SF+HD T N ++R+ DG++ Y +R T T C MDL
Sbjct: 117 TFDSRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVYPDGNVLYSLRVTVTAMCNMDLS 176
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKL 232
+PLD Q C++EIESY YT D+++YWK+ + + L QF I H T
Sbjct: 177 RFPLDTQTCSLEIESYAYTDDDLMLYWKKGNESLNTDDRISLSQFLIQKFHTTTKLAFYS 236
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
+TG Y RL + F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLT
Sbjct: 237 STGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLT 296
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF +++EYAAVNY S +R ++K + +
Sbjct: 297 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLSTVQERKERKLRERL 356
Query: 352 PTPLG 356
P G
Sbjct: 357 PCTCG 361
>gi|194227682|ref|XP_001489514.2| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Equus
caballus]
Length = 452
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|348554549|ref|XP_003463088.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Cavia
porcellus]
Length = 452
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|74006497|ref|XP_857203.1| PREDICTED: glycine receptor subunit alpha-2 isoform 9 [Canis lupus
familiaris]
gi|114687826|ref|XP_001137046.1| PREDICTED: glycine receptor subunit alpha-2 isoform 7 [Pan
troglodytes]
gi|332223909|ref|XP_003261111.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Nomascus
leucogenys]
gi|397468135|ref|XP_003805750.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Pan
paniscus]
gi|402909538|ref|XP_003917474.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Papio
anubis]
gi|410988112|ref|XP_004000332.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Felis catus]
gi|426395226|ref|XP_004063876.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Gorilla
gorilla gorilla]
Length = 452
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|281353495|gb|EFB29079.1| hypothetical protein PANDA_014885 [Ailuropoda melanoleuca]
Length = 431
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 36 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 95
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 96 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 155
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 156 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 212
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 213 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 271
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 272 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 319
>gi|348537180|ref|XP_003456073.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2
[Oreochromis niloticus]
Length = 473
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 147/284 (51%), Positives = 199/284 (70%), Gaps = 4/284 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP F G + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF S+ ++ +
Sbjct: 67 HDFTMRPAFAGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSATNKSM 126
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T AC MD
Sbjct: 127 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAACNMDFS 186
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
+PLD+Q CT+E+ESY YT D+++YWK + + + L QF I T R +
Sbjct: 187 RFPLDSQTCTLELESYAYTDEDLMLYWKSGDESLSTDDRISLSQFLIQKFHTTSRLAFYS 246
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 247 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 306
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY
Sbjct: 307 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNY 350
>gi|221041716|dbj|BAH12535.1| unnamed protein product [Homo sapiens]
Length = 436
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 41 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 100
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 101 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 160
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 161 KNFPMDAQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 217
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 218 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 276
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 277 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 324
>gi|1710184|gb|AAB38273.1| glycine receptor alpha 2B subunit [Homo sapiens]
Length = 360
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|296234946|ref|XP_002762681.1| PREDICTED: glycine receptor subunit alpha-2 isoform 4 [Callithrix
jacchus]
gi|403255312|ref|XP_003920385.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 436
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 41 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 100
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 101 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 160
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 161 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 217
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 218 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 276
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 277 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 324
>gi|292624510|ref|XP_697486.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Danio
rerio]
Length = 464
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/284 (51%), Positives = 199/284 (70%), Gaps = 4/284 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE-DEVL 115
+D +RP F G + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S+ ++ +
Sbjct: 64 HDFTMRPAFAGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSKHNKSM 123
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T AC MD
Sbjct: 124 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTENIMIRVYPDGHVLYSLRVTVTSACNMDFS 183
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
+PLD Q CT+E+ESY YT D+++YWK + + ++ L QF I T R +
Sbjct: 184 RFPLDTQTCTLELESYAYTDEDLMLYWKSGDESLSTDDKISLSQFLIQKFHTTSRLAFYS 243
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 244 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 303
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY
Sbjct: 304 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNY 347
>gi|169646728|ref|NP_001112358.1| glycine receptor subunit alpha-2 isoform B precursor [Homo sapiens]
gi|40557002|gb|AAR87843.1| glycine receptor alpha2 subunit B [Homo sapiens]
gi|47496633|emb|CAG29339.1| GLRA2 [Homo sapiens]
gi|119619265|gb|EAW98859.1| glycine receptor, alpha 2, isoform CRA_b [Homo sapiens]
gi|158260145|dbj|BAF82250.1| unnamed protein product [Homo sapiens]
Length = 452
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|291407100|ref|XP_002719959.1| PREDICTED: glycine receptor, alpha 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 452
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|344288589|ref|XP_003416030.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Loxodonta
africana]
Length = 452
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 150/309 (48%), Positives = 210/309 (67%), Gaps = 17/309 (5%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY------SYWADR 342
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+ + R
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLR 352
Query: 343 AKKKPKAKE 351
++K + KE
Sbjct: 353 KRQKRQNKE 361
>gi|392355603|ref|XP_003752086.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Rattus
norvegicus]
Length = 452
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|301779950|ref|XP_002925392.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1
[Ailuropoda melanoleuca]
Length = 452
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|114687834|ref|XP_001136822.1| PREDICTED: glycine receptor subunit alpha-2 isoform 5 [Pan
troglodytes]
gi|332223911|ref|XP_003261112.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Nomascus
leucogenys]
gi|426395228|ref|XP_004063877.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Gorilla
gorilla gorilla]
Length = 436
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 41 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 100
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 101 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 160
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 161 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 217
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 218 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 276
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 277 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 324
>gi|432947228|ref|XP_004083955.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Oryzias latipes]
Length = 473
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 147/284 (51%), Positives = 199/284 (70%), Gaps = 4/284 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP F G + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF S+ ++ +
Sbjct: 67 HDFTMRPAFAGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSATNKSM 126
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T AC MD
Sbjct: 127 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTAACNMDFS 186
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
+PLD+Q CT+E+ESY YT D+++YWK + + + L QF I T R +
Sbjct: 187 RFPLDSQTCTLELESYAYTDEDLMLYWKSGDESLSTDDRISLSQFLIQKFHTTSRLAFYS 246
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 247 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 306
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY
Sbjct: 307 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNY 350
>gi|327268305|ref|XP_003218938.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Anolis
carolinensis]
Length = 455
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWMSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|296470483|tpg|DAA12598.1| TPA: glycine receptor, alpha 2-like isoform 2 [Bos taurus]
Length = 452
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|426256684|ref|XP_004021967.1| PREDICTED: glycine receptor subunit alpha-2 isoform 4 [Ovis aries]
Length = 436
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 41 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 100
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 101 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 160
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 161 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 217
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 218 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 276
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 277 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 324
>gi|426256680|ref|XP_004021965.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Ovis aries]
gi|426256682|ref|XP_004021966.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Ovis aries]
Length = 452
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|440899770|gb|ELR51025.1| Glycine receptor subunit alpha-2 [Bos grunniens mutus]
Length = 452
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|395526936|ref|XP_003765610.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Sarcophilus
harrisii]
Length = 452
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|402909540|ref|XP_003917475.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Papio
anubis]
Length = 436
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 41 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 100
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 101 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 160
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 161 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 217
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 218 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 276
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 277 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 324
>gi|403255308|ref|XP_003920383.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 452
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|395837966|ref|XP_003791899.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Otolemur
garnettii]
Length = 453
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|431921023|gb|ELK18791.1| Gamma-aminobutyric acid receptor subunit theta [Pteropus alecto]
Length = 661
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 135/303 (44%), Positives = 208/303 (68%), Gaps = 12/303 (3%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V + + ++L GYD+RLRPNFGG PL VG+ + ++S + ISE +M WKD R
Sbjct: 90 VHKILDRVLSGYDVRLRPNFGGAPLPVGISMYVSSIEQISEATMT----------WKDPR 139
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+ D+ LTL EK+WVPD +F N K+SF+HD+T N++ +L+ DG++ YG+R T
Sbjct: 140 LAYHETDQNLTLDYRLLEKLWVPDCYFLNSKDSFVHDMTVENRMFQLHPDGTVRYGIRLT 199
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT AC M+L +P+D C +E+ESYGYTV D+V+YW+ E ++G E+ +PQF+ LG
Sbjct: 200 TTAACFMNLEKFPMDKHTCKLEVESYGYTVDDIVLYWEGHENAIQGTEDLHIPQFSFLGK 259
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
++++ TG+Y+RL+L F +QR+I ++ Q Y P++L SWVSFW+N+E ARV
Sbjct: 260 TMSNKQVLFYTGSYERLTLKFLVQRDIFSYLVQVYWPTVLTTAASWVSFWMNYECPVARV 319
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA 343
+G+T++L + TI++ +++ LP+ S +KAIDIY+V+CF FVF +LLEY +NY ++ R
Sbjct: 320 TVGLTSMLILNTINSHLQNKLPQFSCIKAIDIYMVVCFFFVFLSLLEYVYINYVFYGRRG 379
Query: 344 KKK 346
++
Sbjct: 380 SRR 382
>gi|348554547|ref|XP_003463087.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Cavia
porcellus]
Length = 452
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|296234940|ref|XP_002762678.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Callithrix
jacchus]
gi|296234944|ref|XP_002762680.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Callithrix
jacchus]
Length = 452
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|338728947|ref|XP_003365793.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
gi|338728949|ref|XP_003365794.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
Length = 452
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|395837968|ref|XP_003791900.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Otolemur
garnettii]
Length = 437
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 41 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 100
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 101 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 160
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 161 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 217
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 218 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 276
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 277 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 324
>gi|388490372|ref|NP_001253855.1| glycine receptor subunit alpha-2 [Macaca mulatta]
gi|74006483|ref|XP_548866.2| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Canis lupus
familiaris]
gi|114687824|ref|XP_001137132.1| PREDICTED: glycine receptor subunit alpha-2 isoform 8 [Pan
troglodytes]
gi|332223907|ref|XP_003261110.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Nomascus
leucogenys]
gi|345806787|ref|XP_003435502.1| PREDICTED: glycine receptor subunit alpha-2 [Canis lupus
familiaris]
gi|397468133|ref|XP_003805749.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Pan
paniscus]
gi|402909536|ref|XP_003917473.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Papio
anubis]
gi|410988110|ref|XP_004000331.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Felis catus]
gi|410988114|ref|XP_004000333.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Felis catus]
gi|426395224|ref|XP_004063875.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Gorilla
gorilla gorilla]
gi|355757195|gb|EHH60720.1| Glycine receptor subunit alpha-2 [Macaca fascicularis]
gi|380785019|gb|AFE64385.1| glycine receptor subunit alpha-2 isoform A precursor [Macaca
mulatta]
Length = 452
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|345806789|ref|XP_857159.2| PREDICTED: glycine receptor subunit alpha-2 isoform 8 [Canis lupus
familiaris]
gi|410988116|ref|XP_004000334.1| PREDICTED: glycine receptor subunit alpha-2 isoform 4 [Felis catus]
Length = 436
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 41 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 100
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 101 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 160
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 161 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 217
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 218 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 276
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 277 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 324
>gi|338728951|ref|XP_003365795.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
Length = 436
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 41 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 100
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 101 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 160
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 161 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 217
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 218 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 276
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 277 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 324
>gi|297709452|ref|XP_002831442.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Pongo
abelii]
Length = 452
Score = 300 bits (768), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|1684900|gb|AAB38272.1| glycine receptor alpha 2 subunit [Homo sapiens]
Length = 360
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|4504021|ref|NP_002054.1| glycine receptor subunit alpha-2 isoform A precursor [Homo sapiens]
gi|169646723|ref|NP_001112357.1| glycine receptor subunit alpha-2 isoform A precursor [Homo sapiens]
gi|121578|sp|P23416.1|GLRA2_HUMAN RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor
gi|31849|emb|CAA36257.1| inhibitory glycine receptor [Homo sapiens]
gi|3598701|gb|AAC35290.1| glycine receptor alpha 2 subunit [Homo sapiens]
gi|34783246|gb|AAH32864.1| Glycine receptor, alpha 2 [Homo sapiens]
gi|40557000|gb|AAR87842.1| glycine receptor alpha2 subunit A [Homo sapiens]
gi|119619266|gb|EAW98860.1| glycine receptor, alpha 2, isoform CRA_c [Homo sapiens]
gi|189069147|dbj|BAG35485.1| unnamed protein product [Homo sapiens]
gi|261861444|dbj|BAI47244.1| glycine receptor, alpha 2 [synthetic construct]
gi|312151948|gb|ADQ32486.1| glycine receptor, alpha 2 [synthetic construct]
Length = 452
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|291407098|ref|XP_002719958.1| PREDICTED: glycine receptor, alpha 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 452
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|354482211|ref|XP_003503293.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1
[Cricetulus griseus]
Length = 452
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|34556195|ref|NP_906272.1| glycine receptor subunit alpha-2 precursor [Mus musculus]
gi|66774003|sp|Q7TNC8.1|GLRA2_MOUSE RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor
gi|33604080|gb|AAH56342.1| Glycine receptor, alpha 2 subunit [Mus musculus]
gi|46362565|gb|AAH68987.1| Glycine receptor, alpha 2 subunit [Mus musculus]
gi|74228154|dbj|BAE23962.1| unnamed protein product [Mus musculus]
Length = 452
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|6980952|ref|NP_036700.1| glycine receptor subunit alpha-2 precursor [Rattus norvegicus]
gi|392355605|ref|XP_003752087.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Rattus
norvegicus]
gi|56744|emb|CAA40549.1| neonatal type of glycine receptor [Rattus norvegicus]
gi|288345|emb|CAA43471.1| inhibitory glycine receptor alpha 2A subunit [Rattus norvegicus]
gi|13548661|emb|CAC35981.1| glycine receptor alpha 2 precursor [Rattus norvegicus]
gi|149035866|gb|EDL90533.1| rCG49701, isoform CRA_b [Rattus norvegicus]
gi|227683|prf||1709209A Gly receptor subtype
Length = 452
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|354482213|ref|XP_003503294.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2
[Cricetulus griseus]
Length = 452
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|327268303|ref|XP_003218937.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Anolis
carolinensis]
Length = 455
Score = 300 bits (767), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWMSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|224042764|ref|XP_002197622.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Taeniopygia
guttata]
Length = 452
Score = 300 bits (767), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 201/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEDKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|449270932|gb|EMC81575.1| Glycine receptor subunit alpha-2 [Columba livia]
Length = 452
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 201/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEDKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|363728848|ref|XP_003640566.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Gallus
gallus]
Length = 452
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 201/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEDKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|395526938|ref|XP_003765611.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Sarcophilus
harrisii]
Length = 452
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|148708798|gb|EDL40745.1| glycine receptor, alpha 2 subunit, isoform CRA_a [Mus musculus]
Length = 470
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 75 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 134
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 135 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 194
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 195 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 251
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 252 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 310
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 311 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 358
>gi|296195142|ref|XP_002745250.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Callithrix
jacchus]
Length = 464
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/285 (51%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 339
>gi|23308635|ref|NP_694497.1| glycine receptor subunit alpha-3 precursor [Danio rerio]
gi|14041784|emb|CAC38837.1| glycine receptor alphaZ3 subunit [Danio rerio]
Length = 450
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 203/285 (71%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E PV+ + LPQF IL E++ R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGPVQVADGLTLPQF-ILKDESDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|326675855|ref|XP_002662272.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Danio rerio]
Length = 517
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 211/312 (67%), Gaps = 7/312 (2%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF- 108
QLL +D +RP FGG P+ VG+D+ + S D+ISEV MD+T+T+YL YWKD+RL+F
Sbjct: 114 QLLRIDDHDFTMRPAFGGPPIPVGVDVQVESLDTISEVDMDFTMTLYLRHYWKDERLSFP 173
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S+ ++ +T +KIWVPD FF + K SF+HD T N ++R+ DG++ Y +R T T
Sbjct: 174 STNNQSMTFDSRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVYPDGNVLYSLRVTVTA 233
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HET 225
C MDL +PLD Q C++EIESY YT D+++YWK+ + + L QF I H T
Sbjct: 234 MCNMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKKGNESLNTDDRISLSQFFIQKFHTT 293
Query: 226 NDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAL 285
+TG Y RL + F L+R++ +F+ QTY P+ L+VMLSWVSFWI+ A ARV L
Sbjct: 294 TKLAFYSSTGWYNRLYIHFTLRRHVFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPL 353
Query: 286 GITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAK 344
GITTVLTM+TI TGV +S+PR+SY+KA+DIYL + FVFVF +++EYAAVNY + +R +
Sbjct: 354 GITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLTTVQERRE 413
Query: 345 KKPKAKEPTPLG 356
+K + + P G
Sbjct: 414 RKLRNQLPCTCG 425
>gi|296195144|ref|XP_002745251.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Callithrix
jacchus]
Length = 449
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/285 (51%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 339
>gi|441675485|ref|XP_003271905.2| PREDICTED: gamma-aminobutyric acid receptor subunit theta [Nomascus
leucogenys]
Length = 632
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 138/313 (44%), Positives = 214/313 (68%), Gaps = 4/313 (1%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + K+ E A V + + ++L YD+RLRPNF G P+ V + + + S + ISE++M
Sbjct: 45 LNLFNCKNCANE--AVVQKILDRVLSRYDVRLRPNFLGAPVPVRVSIYVTSIEQISEMNM 102
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM+ +Q WKD RLA+ LTL EK+WVPD +F N K++F+HDVT N++
Sbjct: 103 DYTITMFFHQTWKDSRLAYYETTLNLTLDYRMHEKLWVPDCYFLNSKDAFVHDVTVENRV 162
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPV 207
+L+ DG++ YG+R TTT AC +DLH +P+D Q C + +ESYGYTV D++++W + +
Sbjct: 163 FQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNLVVESYGYTVEDIILFWDDNGNAI 222
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
EE ++PQFT LG ++ TG+Y RL L F++QR + ++ Q Y P++L +
Sbjct: 223 HMTEELRIPQFTFLGRTITSKEVYFYTGSYIRLILKFQVQREVNSYLVQVYWPTVLTTIT 282
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SW+SFW+N+++++ARV +G+T++L +TTI + +R LP IS +KAIDIY+++C FVF +
Sbjct: 283 SWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKLPNISCIKAIDIYILVCLFFVFLS 342
Query: 328 LLEYAAVNYSYWA 340
LLEY +NY +++
Sbjct: 343 LLEYVYINYLFYS 355
>gi|192447409|ref|NP_001122232.1| gamma-aminobutyric acid receptor subunit rho-3 precursor [Danio
rerio]
gi|190337462|gb|AAI63099.1| Zgc:194845 [Danio rerio]
gi|190339844|gb|AAI63103.1| Zgc:194845 [Danio rerio]
Length = 472
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/321 (47%), Positives = 214/321 (66%), Gaps = 4/321 (1%)
Query: 35 KKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTIT 94
KKS +T+ L ++ + ++ +D +RP FGG + VG+D+ + S D ISEV+MD+T+T
Sbjct: 55 KKSDSTKSLLIKSEQLLRI-EDHDFAMRPGFGGSAIPVGIDVQVESIDGISEVNMDFTMT 113
Query: 95 MYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
+YL YW+DDRLAF SS ++ T +KIWVPD FF + K SF+HD T N ++R+
Sbjct: 114 LYLRHYWQDDRLAFPSSNNKSRTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVF 173
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TPVRGVEE 212
DG+I Y +R T T C MD +PLD QNC++E+ESY Y D+++YWK +E
Sbjct: 174 PDGNILYSVRITVTALCSMDFSRFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRTDE 233
Query: 213 AQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVS 271
L QF I H + +TG Y RL ++F L+R+I +F+ QTY P++L+VMLSWVS
Sbjct: 234 IALSQFFIEEFHPSYGLAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVMLSWVS 293
Query: 272 FWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEY 331
FWI+ A ARV+LGITTVLTM+TI TGV +S+P++SYVKA+DIYL F+FVF +++EY
Sbjct: 294 FWIDRRAVPARVSLGITTVLTMSTIITGVSASMPQVSYVKAVDIYLWASFLFVFLSVIEY 353
Query: 332 AAVNYSYWADRAKKKPKAKEP 352
AAVNY + KK K K P
Sbjct: 354 AAVNYFTTVEEMKKLQKGKLP 374
>gi|224042766|ref|XP_002197634.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Taeniopygia
guttata]
Length = 452
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 201/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEDKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|443716915|gb|ELU08208.1| hypothetical protein CAPTEDRAFT_110825, partial [Capitella teleta]
Length = 439
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/310 (48%), Positives = 205/310 (66%), Gaps = 5/310 (1%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
ANV++ I L++GYD RLRPN+ P+ VG+ + I+S SISEV MD+T+ Y Q W+D
Sbjct: 5 ANVSRLIDSLIYGYDKRLRPNYKAAPVEVGITMFISSVSSISEVDMDFTLDFYFRQNWQD 64
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F + L +S + EKIW PDTFFAN KN+ H T +N +R+ G + +R
Sbjct: 65 PRLQFPDNESELCISNEMLEKIWWPDTFFANAKNAKFHIATTKNAFLRIKPTGHVLQSIR 124
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV---EEAQLPQFTI 220
T T C MDL Y+P D Q C++EIESYGY+ D+V W E P V + ++PQF +
Sbjct: 125 LTVTAVCDMDLTYFPFDTQICSLEIESYGYSDKDIVYSWHEGPKDSVGIDSDVRMPQFHV 184
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
GH E+L+TG Y RL F R+IGY+V Q Y+PS LIV+LSWVSFW++ +A
Sbjct: 185 KGHRAEAMVERLSTGNYSRLGCQFHFSRSIGYYVIQIYVPSTLIVVLSWVSFWLSRDAVP 244
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
ARVALGITTVLTMTT+ + +SLP+ISY+K+ID++LV CF+ VF +L+EYA V S+ +
Sbjct: 245 ARVALGITTVLTMTTLISSTNASLPKISYMKSIDVFLVTCFIMVFGSLIEYAVV--SFIS 302
Query: 341 DRAKKKPKAK 350
++AK K +
Sbjct: 303 NKAKNTQKRR 312
>gi|410917370|ref|XP_003972159.1| PREDICTED: glycine receptor subunit alpha-3-like [Takifugu
rubripes]
Length = 510
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G + V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 96 GYDARIRPNFKGPAVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDS 155
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 156 LDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 215
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E PV+ E LPQF IL E++ R +
Sbjct: 216 KNFPMDVQTCIMQLESFGYTMNDLIFEWQENGPVQVAEGLTLPQF-ILKDESDLRYCTKH 274
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 275 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 334
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 335 TMTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 379
>gi|190337591|gb|AAI63529.1| Glycine receptor, alpha 3 [Danio rerio]
Length = 450
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 203/285 (71%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E PV+ + LPQF IL E++ R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGPVQVADGLTLPQF-ILKDESDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|118084056|ref|XP_001234291.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Gallus
gallus]
Length = 452
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 201/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEDKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|345327023|ref|XP_003431119.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2
[Ornithorhynchus anatinus]
Length = 452
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDTRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ + LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVADGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|410915462|ref|XP_003971206.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Takifugu rubripes]
Length = 472
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 153/306 (50%), Positives = 207/306 (67%), Gaps = 5/306 (1%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF- 108
QLL +D +RP FGG L VG+D+ + S DSISEV+MD+T+T+YL YW+DDRLAF
Sbjct: 69 QLLRIDDHDFAMRPGFGGSALPVGIDVQVESIDSISEVNMDFTMTLYLRHYWQDDRLAFP 128
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
SS ++ T +KIWVPD FF + K SF+HD T N ++R+ DG+I Y +R T T
Sbjct: 129 SSSNKSRTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILYSVRITVTA 188
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTILGHETN- 226
C MD +PLD QNC++E+ESY Y D+++YWK +E L QF I + +
Sbjct: 189 LCSMDFSSFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRTDEIVLSQFFIEDFQPSF 248
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+TG Y RL ++F L+R+I +F+ QTY P++L+VMLSWVSFWI+ A ARV+LG
Sbjct: 249 GLAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRAVPARVSLG 308
Query: 287 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKK 346
ITTVLTM+TI TGV +S+P++SYVKA+DIYL F+FVF +++EYAAVNY + KK
Sbjct: 309 ITTVLTMSTIITGVSASMPQVSYVKAVDIYLWASFLFVFLSVIEYAAVNYFTTVEEMKKL 368
Query: 347 PKAKEP 352
+AK P
Sbjct: 369 KRAKIP 374
>gi|348515583|ref|XP_003445319.1| PREDICTED: glycine receptor subunit alpha-4-like [Oreochromis
niloticus]
Length = 454
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 54 GYDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQKWNDPRLAYSEYPDDS 113
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ DGS+ Y +R T TL+C MDL
Sbjct: 114 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQDGSVLYSIRLTLTLSCPMDL 173
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W E PV+ ++ LPQF + LG+ T
Sbjct: 174 KNFPMDIQTCTMQLESFGYTMNDLIFEWLSENPVQVADDLTLPQFVLKEEKDLGYCT--- 230
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGIT
Sbjct: 231 -KHYNTGQFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGIT 289
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 290 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 337
>gi|14010349|gb|AAK51962.1|AF362764_1 glycine receptor alpha 3 subunit [Mus musculus]
Length = 463
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/284 (50%), Positives = 201/284 (70%), Gaps = 4/284 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVL 115
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+ L
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSYPDDSL 115
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 DLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLK 175
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEKL 232
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 NFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKHY 234
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITT LT
Sbjct: 235 NTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTDLT 294
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
MTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 338
>gi|296484083|tpg|DAA26198.1| TPA: gamma-aminobutyric acid receptor subunit rho-2-like [Bos
taurus]
Length = 421
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/319 (47%), Positives = 213/319 (66%), Gaps = 5/319 (1%)
Query: 43 LANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWK 102
L V + L Y + + +F + VG+D+ + S DSISEV MD+T+T+YL YWK
Sbjct: 6 LQTVPSSQKALSRCYLMLSKTSFTCPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWK 65
Query: 103 DDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYG 161
D+RLAF S+ ++ +T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y
Sbjct: 66 DERLAFPSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYS 125
Query: 162 MRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFT 219
MR T T C MD ++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF
Sbjct: 126 MRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFL 185
Query: 220 ILGHETNDRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEA 278
I T R + TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A
Sbjct: 186 IQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRA 245
Query: 279 TSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-S 337
ARV+LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY +
Sbjct: 246 VPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLT 305
Query: 338 YWADRAKKKPKAKEPTPLG 356
+R ++K + K P G
Sbjct: 306 TVQERKERKLQEKFPCMCG 324
>gi|449275793|gb|EMC84561.1| Gamma-aminobutyric acid receptor subunit rho-3, partial [Columba
livia]
Length = 425
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/305 (47%), Positives = 209/305 (68%), Gaps = 11/305 (3%)
Query: 54 LHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSED 112
+ +D LRP FGG P+ VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S+++
Sbjct: 24 IEDHDFALRPGFGGSPIPVGIDVQVESIDSISEVDMDFTMTLYLRHYWKDERLSFRSNKN 83
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ +T G +KIWVPD FF + K SF+HD T N ++R+ DG++ + +R T + C M
Sbjct: 84 KSMTFDGRLIKKIWVPDVFFVHSKRSFIHDTTVENIMLRVYPDGNVLFSLRITVSAMCFM 143
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKE 230
D +PLD QNC++E+ESY Y D+++YWK + E L QF I E
Sbjct: 144 DFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNKSLSTDEHISLSQFFI---EEFSASS 200
Query: 231 KLA----TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
LA TG Y RL ++F L+R+I +FV Q+Y P++L+VMLSWVSFWI+ A ARV+LG
Sbjct: 201 GLAFYSSTGWYNRLFINFALRRHIFFFVLQSYFPAMLMVMLSWVSFWIDRRAVPARVSLG 260
Query: 287 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKK 345
ITTVLTM+TI TGV +S+P++SY+KA+D+YL + F+FVF +++EYAAVNY + +R +
Sbjct: 261 ITTVLTMSTIMTGVSASMPQVSYIKAVDVYLWISFLFVFLSVIEYAAVNYLTTIEERKQL 320
Query: 346 KPKAK 350
K + K
Sbjct: 321 KKRGK 325
>gi|354493194|ref|XP_003508728.1| PREDICTED: glycine receptor subunit alpha-3 [Cricetulus griseus]
Length = 464
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|403285190|ref|XP_003933918.1| PREDICTED: glycine receptor subunit alpha-3 [Saimiri boliviensis
boliviensis]
Length = 464
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|326913085|ref|XP_003202872.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Meleagris gallopavo]
Length = 433
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 146/311 (46%), Positives = 210/311 (67%), Gaps = 10/311 (3%)
Query: 54 LHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSED 112
+ +D LRP FGG P+ VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S+++
Sbjct: 32 IEDHDFALRPGFGGSPIPVGIDVQVESIDSISEVDMDFTMTLYLRHYWKDERLSFRSTKN 91
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ +T G +KIWVPD FF + K SF+HD T N ++R+ DG++ + +R T + C M
Sbjct: 92 KSMTFDGRLIKKIWVPDVFFVHSKRSFIHDTTVENVMLRVYPDGNVLFSLRITVSAMCFM 151
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKE 230
D +PLD QNC++E+ESY Y D+++YWK + E L QF I E
Sbjct: 152 DFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNESLSTDEHISLSQFFI---EEFSASS 208
Query: 231 KLA----TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
LA TG Y RL ++F L+R+I +FV Q+Y P++L+VMLSWVSFWI+ A ARV+LG
Sbjct: 209 GLAFYSSTGWYNRLFINFALRRHIFFFVLQSYFPAMLMVMLSWVSFWIDRRAVPARVSLG 268
Query: 287 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKK 346
ITTVLTM+TI TGV +S+P++SY+KA+D+YL + F+FVF +++EYAAVNY + K+
Sbjct: 269 ITTVLTMSTIITGVSASMPQVSYIKAVDVYLWISFLFVFLSVIEYAAVNYLTTIEERKQL 328
Query: 347 PKAKEPTPLGN 357
K + + + N
Sbjct: 329 KKRGKASGMYN 339
>gi|281341890|gb|EFB17474.1| hypothetical protein PANDA_011670 [Ailuropoda melanoleuca]
Length = 442
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 36 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 95
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 96 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 155
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 156 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 214
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 215 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 274
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 275 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 319
>gi|121580|sp|P24524.1|GLRA3_RAT RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor
gi|204883|gb|AAA63492.1| inhibitory glycine receptor alpha subunit [Rattus norvegicus]
Length = 464
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|110347441|ref|NP_006520.2| glycine receptor subunit alpha-3 isoform a precursor [Homo sapiens]
gi|109076221|ref|XP_001088083.1| PREDICTED: glycine receptor subunit alpha-3-like [Macaca mulatta]
gi|114596937|ref|XP_517543.2| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Pan
troglodytes]
gi|297674705|ref|XP_002815347.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Pongo
abelii]
gi|397505899|ref|XP_003823478.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Pan
paniscus]
gi|426346047|ref|XP_004040701.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Gorilla
gorilla gorilla]
gi|116242496|sp|O75311.2|GLRA3_HUMAN RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor
gi|23241723|gb|AAH36086.1| Glycine receptor, alpha 3 [Homo sapiens]
gi|119625135|gb|EAX04730.1| glycine receptor, alpha 3, isoform CRA_a [Homo sapiens]
gi|119625137|gb|EAX04732.1| glycine receptor, alpha 3, isoform CRA_a [Homo sapiens]
gi|123980142|gb|ABM81900.1| glycine receptor, alpha 3 [synthetic construct]
gi|123994945|gb|ABM85074.1| glycine receptor, alpha 3 [synthetic construct]
gi|355687730|gb|EHH26314.1| hypothetical protein EGK_16247 [Macaca mulatta]
gi|355749674|gb|EHH54073.1| hypothetical protein EGM_14823 [Macaca fascicularis]
Length = 464
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|382928891|gb|AFG29911.1| GABA-gated chloride channel 1 [Tetranychus urticae]
Length = 812
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/321 (44%), Positives = 208/321 (64%), Gaps = 13/321 (4%)
Query: 44 ANVTQTISQLLH-----GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLN 98
++ ISQ+L+ GYD R+RPN+GG P+ VG+ + I + S+SEV MD+T Y
Sbjct: 43 GDIGSNISQILNSFFSSGYDKRVRPNYGGPPVKVGVTMHILTISSVSEVQMDFTADFYFR 102
Query: 99 QYWKDDRLAFSSEDEV--LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDG 156
Q W+D RL+F + + + + + A+KIWVPDTFFAN+K ++ H+ T +N +R++ DG
Sbjct: 103 QLWRDSRLSFKARHGISQILVDAEVADKIWVPDTFFANEKQAYFHEATTKNTFLRISHDG 162
Query: 157 SITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQL 215
+ +R T T +C M+L Y+P+D Q C +EIESYGY++ D++ W E V+ L
Sbjct: 163 QVLRSIRLTVTASCPMNLQYFPMDRQKCNIEIESYGYSMTDIIYNWVDENAVKIDSNLML 222
Query: 216 PQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWIN 275
PQF+I + + L TG Y RL +L R++GY++ Q Y+P+ LIV++SWVSFW++
Sbjct: 223 PQFSIASIRQSWKYISLTTGNYSRLMCEIQLTRSMGYYMIQIYVPASLIVIISWVSFWLH 282
Query: 276 HEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVN 335
AT ARV LG+ TVLTMTT+ + S LP+ISYVK+ID++L CFV VFAALLEYAAV
Sbjct: 283 RNATPARVHLGVITVLTMTTLMSSTNSQLPKISYVKSIDVFLGTCFVMVFAALLEYAAVG 342
Query: 336 Y-----SYWADRAKKKPKAKE 351
Y S +R ++ KA E
Sbjct: 343 YIGKRISMRKNRFQQLAKAAE 363
>gi|431918319|gb|ELK17546.1| Glycine receptor subunit alpha-3 [Pteropus alecto]
Length = 415
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|66774025|sp|Q91XP5.2|GLRA3_MOUSE RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor
gi|31322540|gb|AAP22967.1| glycine receptor alpha 3 subunit [Mus musculus]
Length = 464
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|313849050|dbj|BAJ41377.1| GABA receptor [Tetranychus urticae]
Length = 827
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/321 (44%), Positives = 208/321 (64%), Gaps = 13/321 (4%)
Query: 44 ANVTQTISQLLH-----GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLN 98
++ ISQ+L+ GYD R+RPN+GG P+ VG+ + I + S+SEV MD+T Y
Sbjct: 57 GDIGSNISQILNSFFSSGYDKRVRPNYGGPPVKVGVTMHILTISSVSEVQMDFTADFYFR 116
Query: 99 QYWKDDRLAFSSEDEV--LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDG 156
Q W+D RL+F + + + + + A+KIWVPDTFFAN+K ++ H+ T +N +R++ DG
Sbjct: 117 QLWRDSRLSFKARHGISQILVDAEVADKIWVPDTFFANEKQAYFHEATTKNTFLRISHDG 176
Query: 157 SITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQL 215
+ +R T T +C M+L Y+P+D Q C +EIESYGY++ D++ W E V+ L
Sbjct: 177 QVLRSIRLTVTASCPMNLQYFPMDRQKCNIEIESYGYSMTDIIYNWVDENAVKIDSNLML 236
Query: 216 PQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWIN 275
PQF+I + + L TG Y RL +L R++GY++ Q Y+P+ LIV++SWVSFW++
Sbjct: 237 PQFSIASIRQSWKYISLTTGNYSRLMCEIQLTRSMGYYMIQIYVPASLIVIISWVSFWLH 296
Query: 276 HEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVN 335
AT ARV LG+ TVLTMTT+ + S LP+ISYVK+ID++L CFV VFAALLEYAAV
Sbjct: 297 RNATPARVHLGVITVLTMTTLMSSTNSQLPKISYVKSIDVFLGTCFVMVFAALLEYAAVG 356
Query: 336 Y-----SYWADRAKKKPKAKE 351
Y S +R ++ KA E
Sbjct: 357 YIGKRISMRKNRFQQLAKAAE 377
>gi|332217779|ref|XP_003258041.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Nomascus
leucogenys]
Length = 464
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|149638346|ref|XP_001516922.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1
[Ornithorhynchus anatinus]
Length = 452
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/288 (50%), Positives = 202/288 (70%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDTRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ + LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVADGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|73993734|ref|XP_543200.2| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Canis lupus
familiaris]
Length = 464
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|149698066|ref|XP_001498366.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Equus
caballus]
Length = 464
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|344288255|ref|XP_003415866.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Loxodonta
africana]
Length = 449
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|3342792|gb|AAC39919.1| glycine receptor alpha 3 subunit [Homo sapiens]
Length = 465
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|350592347|ref|XP_003483449.1| PREDICTED: glycine receptor subunit alpha-3 [Sus scrofa]
Length = 464
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|344288257|ref|XP_003415867.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Loxodonta
africana]
Length = 464
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|354504643|ref|XP_003514383.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit theta-like [Cricetulus griseus]
Length = 629
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 135/311 (43%), Positives = 216/311 (69%), Gaps = 5/311 (1%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
A V + + ++L YD+RLRPNFGG P+ V + + ++S + ISE++MDYTITM+L+Q WKD
Sbjct: 52 AVVQKILDRVLSTYDVRLRPNFGGAPVPVSVSIYVSSIEQISEINMDYTITMFLHQTWKD 111
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RLA+ + LTL EK+WVPD +F N KN+F+HDVT N++ +L+ DG++ YG+R
Sbjct: 112 TRLAYYETNLNLTLDYRMHEKLWVPDCYFVNSKNAFVHDVTVENRVFQLHPDGTVRYGIR 171
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILG 222
T +DL +P+D Q C +E+ESYGYT+ D+V+ W+ E + +E +PQFT LG
Sbjct: 172 XVHT---YLDLQKFPMDKQACKLEVESYGYTIDDIVLSWEDENAIHITDELHIPQFTYLG 228
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
++ TG+Y RL + F++QR + ++ Q Y P++L +LSW+SFW+N+++++AR
Sbjct: 229 RTITSKEVYFYTGSYMRLIVKFQVQREVRSYLVQVYWPTVLTTILSWISFWMNYDSSAAR 288
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADR 342
V +G+T++L +TTI + +R LP IS +KAIDIY+++C FVF +LLEY +NY +++
Sbjct: 289 VTIGLTSILVLTTIDSHMRDKLPHISCIKAIDIYILVCLFFVFLSLLEYVYINYLFFSQE 348
Query: 343 AKK-KPKAKEP 352
+++ + + K+P
Sbjct: 349 SRRNRRRFKKP 359
>gi|110347433|ref|NP_001036008.1| glycine receptor subunit alpha-3 isoform b precursor [Homo sapiens]
gi|149698068|ref|XP_001498338.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Equus
caballus]
gi|332820616|ref|XP_003310621.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Pan
troglodytes]
gi|395735507|ref|XP_003776595.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Pongo
abelii]
gi|397505897|ref|XP_003823477.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Pan
paniscus]
gi|426346045|ref|XP_004040700.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Gorilla
gorilla gorilla]
gi|3342236|gb|AAC39917.1| glycine receptor alpha 3 subunit [Homo sapiens]
gi|119625136|gb|EAX04731.1| glycine receptor, alpha 3, isoform CRA_b [Homo sapiens]
Length = 449
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|301774520|ref|XP_002922679.1| PREDICTED: glycine receptor subunit alpha-3-like isoform 2
[Ailuropoda melanoleuca]
Length = 447
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|410956542|ref|XP_003984901.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Felis catus]
Length = 464
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|441619761|ref|XP_004088614.1| PREDICTED: glycine receptor subunit alpha-3 [Nomascus leucogenys]
Length = 449
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|345790724|ref|XP_003433410.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Canis lupus
familiaris]
Length = 449
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|301774518|ref|XP_002922678.1| PREDICTED: glycine receptor subunit alpha-3-like isoform 1
[Ailuropoda melanoleuca]
Length = 462
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|410956544|ref|XP_003984902.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Felis catus]
Length = 449
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|155369743|ref|NP_446176.3| glycine receptor subunit alpha-3 [Rattus norvegicus]
gi|13548663|emb|CAC35982.1| glycine receptor alpha 3 precursor [Rattus norvegicus]
Length = 480
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 72 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 131
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 132 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 191
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 192 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 250
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 251 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 310
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 311 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 355
>gi|348566767|ref|XP_003469173.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit
alpha-3-like [Cavia porcellus]
Length = 480
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 72 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 131
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 132 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 191
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 192 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 250
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 251 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 310
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 311 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 355
>gi|120300936|ref|NP_536686.2| glycine receptor subunit alpha-3 [Mus musculus]
gi|147897779|gb|AAI40462.1| Glycine receptor, alpha 3 subunit [synthetic construct]
gi|148696654|gb|EDL28601.1| glycine receptor, alpha 3 subunit [Mus musculus]
gi|151555313|gb|AAI48712.1| Glycine receptor, alpha 3 subunit [synthetic construct]
Length = 480
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 72 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 131
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 132 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 191
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 192 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 250
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 251 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 310
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 311 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 355
>gi|126336874|ref|XP_001364595.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Monodelphis
domestica]
Length = 452
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 201/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E L QF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLSQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|350592345|ref|XP_003132880.3| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Sus scrofa]
Length = 449
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|312382490|gb|EFR27933.1| hypothetical protein AND_04817 [Anopheles darlingi]
Length = 333
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 174/346 (50%), Positives = 202/346 (58%), Gaps = 71/346 (20%)
Query: 42 RLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYW 101
RL NVTQTIS++L GYDIRLRPNFG + V DYTITMYLNQYW
Sbjct: 5 RLENVTQTISRILEGYDIRLRPNFGASRI---------------AVPQDYTITMYLNQYW 49
Query: 102 KDDRLAFSS-----------------------EDEVLTLSGDFAEKIWVPDTFFANDKNS 138
KD+RLAF++ ++V+TLSGDFAEKIWVPDTFFANDKNS
Sbjct: 50 KDERLAFNAYALWGDNQHDHTSGGDIMIEDDGANDVITLSGDFAEKIWVPDTFFANDKNS 109
Query: 139 FLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDV 198
FLHDVTERNKLVRL GDG++TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTV DV
Sbjct: 110 FLHDVTERNKLVRLAGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDV 169
Query: 199 VMYWKETPVRGVEEAQLPQFTILGHETNDRK-EKLATGT-----YQRLSLS-FKLQRNIG 251
VMYW+ TP+RGVEEA+LPQFTI+G+ETNDRK EK T Q + +S RN
Sbjct: 170 VMYWRSTPIRGVEEAELPQFTIIGYETNDRKTEKTTCSTDDIIELQDIRMSPIASLRNRH 229
Query: 252 Y---------------FVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTI 296
Y V P + S+ S R A + I
Sbjct: 230 YPNSAAASSDSASAAETVDSAKFPPSFRIARSYGS--TTRSGLRYRNARAQGRPKMLHAI 287
Query: 297 STG---VRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
G +++S+P+I V ID Y + F FAA N YW
Sbjct: 288 KRGASVIKASIPKIKDVNVIDKYSRVIFPVSFAAF------NAGYW 327
>gi|301774574|ref|XP_002922711.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Ailuropoda melanoleuca]
Length = 476
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 154/334 (46%), Positives = 214/334 (64%), Gaps = 16/334 (4%)
Query: 35 KKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVS 88
K S +R ++T++ QLL +D +RP FGG + VG+D+ + S DSISEV
Sbjct: 56 KTSPILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISEVD 115
Query: 89 MDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERN 147
MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T N
Sbjct: 116 MDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDN 175
Query: 148 KLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPV 207
++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK
Sbjct: 176 VMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWK---- 231
Query: 208 RGVEEAQLPQFTILGHETNDRKE----KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSIL 263
+G + + + L H G Y RL ++F L+R+I +F+ QTY P+ L
Sbjct: 232 KGNDSLKTDERISLSHWGVGGGGGVILHFRKGWYNRLYINFTLRRHIFFFLLQTYFPATL 291
Query: 264 IVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVF 323
+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + FVF
Sbjct: 292 MVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVF 351
Query: 324 VFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
VF ++LEYAAVNY + +R ++K + K P G
Sbjct: 352 VFLSVLEYAAVNYLTTVQERKERKLREKLPCTCG 385
>gi|410909472|ref|XP_003968214.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Takifugu rubripes]
Length = 470
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 156/350 (44%), Positives = 226/350 (64%), Gaps = 10/350 (2%)
Query: 13 NSENELESQIGNSDSEKLRLCHKKSATTERLANVTQTI----SQLLH--GYDIRLRPNFG 66
NS + ++ ++ K + + +RL + T+T+ QLL +D +RP FG
Sbjct: 25 NSGRRKQKEVFLEENSKFKFGGRIDHKLKRL-DSTKTLLIKSEQLLRIEEHDFAMRPGFG 83
Query: 67 GDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED-EVLTLSGDFAEKI 125
G + VG+D+ + S DSISEV+MD+T+T+YL YWKD+RLAF S++ + T +KI
Sbjct: 84 GAAIPVGIDVQVESIDSISEVNMDFTMTLYLRHYWKDERLAFPSQNNQSRTFDSRLVKKI 143
Query: 126 WVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCT 185
WVPD FF + K SF+HD T N ++R+ DG+I + +R T T C MD +PLD QNC+
Sbjct: 144 WVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILFSVRVTVTALCSMDFSSFPLDTQNCS 203
Query: 186 VEIESYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLS 243
+E+ESY Y D+++YWK +E L QF I H ++ +TG Y RL ++
Sbjct: 204 LELESYAYNENDLMLYWKNGNDSLRTDEIVLSQFFIEQFHASSGLAFYSSTGWYNRLFIT 263
Query: 244 FKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSS 303
F L+R+I +F+ QTY P++L+V+LSWVSFWI+ A ARV+LGITTVLTM+TI TGV SS
Sbjct: 264 FILRRHIFFFMLQTYFPTMLMVVLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVSSS 323
Query: 304 LPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPT 353
+P++SYVKA+DIYL F+FVF +++EYAAVNY + +K + K P+
Sbjct: 324 MPQVSYVKAVDIYLWTSFLFVFLSVIEYAAVNYCTTLEETRKMKRGKIPS 373
>gi|351694568|gb|EHA97486.1| Glycine receptor subunit alpha-3 [Heterocephalus glaber]
Length = 464
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 145/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|348557518|ref|XP_003464566.1| PREDICTED: glycine receptor subunit alpha-1 [Cavia porcellus]
Length = 467
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 154/347 (44%), Positives = 220/347 (63%), Gaps = 12/347 (3%)
Query: 1 MSELQIIRIPDFNSENELESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLL------ 54
++ LQ + S++E E + L L K A R A + + S L
Sbjct: 7 LAALQQMDKARTQSQHEKEPSLTLCFPLSLSLAASKEAEAARSAPKSMSPSDFLDKLMGR 66
Query: 55 -HGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-ED 112
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D
Sbjct: 67 TSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPD 126
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC M
Sbjct: 127 DSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPM 186
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA-QLPQFTILGHETNDR--K 229
DL +P+D Q C +++ES+GYT+ D++ W+E V + LPQF IL E + R
Sbjct: 187 DLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQF-ILKEEKDLRYCT 245
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV LGITT
Sbjct: 246 KHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITT 305
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
VLTMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 306 VLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 352
>gi|327268742|ref|XP_003219155.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Anolis carolinensis]
Length = 447
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 148/313 (47%), Positives = 210/313 (67%), Gaps = 11/313 (3%)
Query: 54 LHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSED 112
+ +D +RP FGG P+ VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S+ +
Sbjct: 50 IEDHDFAMRPGFGGSPIPVGIDVQVESIDSISEVDMDFTMTLYLRHYWKDERLSFPSTRN 109
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ +T G +KIWVPD FF + K SF+HD T N ++R+ DG++ + +R T + C M
Sbjct: 110 KSMTFDGRLIKKIWVPDIFFVHSKRSFIHDTTMENVMLRVYPDGNVLFSLRITVSAMCFM 169
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKE 230
D +PLD QNC++E+ESY Y D+++YWK + E L QF I E
Sbjct: 170 DFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNESLATDEHISLSQFFI---EEFSASS 226
Query: 231 KLA----TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
LA TG Y RL ++F L+R+I +FV Q+Y PS+L+VMLSWVSFWI+ A ARV+LG
Sbjct: 227 GLAFYSSTGWYNRLFINFGLRRHIFFFVLQSYFPSMLMVMLSWVSFWIDRRAVPARVSLG 286
Query: 287 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKK 345
ITTVLTM+TI TGV +S+P++SY+KA+D+YL + F+FVF +++EYAAVNY + +R +
Sbjct: 287 ITTVLTMSTIITGVSASMPQVSYIKAVDVYLWISFLFVFLSVIEYAAVNYLTTVEERKQL 346
Query: 346 KPKAKEPTPLGNY 358
K + K G Y
Sbjct: 347 KRRGKVCIGAGMY 359
>gi|301607542|ref|XP_002933371.1| PREDICTED: glycine receptor subunit alpha-3-like [Xenopus
(Silurana) tropicalis]
Length = 449
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 144/285 (50%), Positives = 202/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ + SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFVNSFGSIAETTMDYRLNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ DG++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKDGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E PV+ + LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQENGPVQIADGLTLPQF-VLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|432897309|ref|XP_004076408.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Oryzias latipes]
Length = 479
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 154/328 (46%), Positives = 218/328 (66%), Gaps = 4/328 (1%)
Query: 29 KLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVS 88
++ L KK +T+ L ++ + ++ +D +RP FGG L VG+D+ + S DSISEV+
Sbjct: 56 RVDLKMKKLDSTKSLLIKSEQLLRI-EDHDFAMRPGFGGSALPVGIDVQVESIDSISEVN 114
Query: 89 MDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERN 147
MD+T+T+YL YW+DDRLAF SS ++ T +KIWVPD FF + K SF+HD T N
Sbjct: 115 MDFTMTLYLRHYWQDDRLAFPSSSNKSRTFDSRLIKKIWVPDVFFVHSKRSFIHDTTMEN 174
Query: 148 KLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TP 206
++R+ DG+I Y +R T T C MD +PLD QNC++E+ESY Y D+++YWK
Sbjct: 175 IMLRVFPDGNILYSVRITVTALCSMDFSSFPLDTQNCSLELESYAYNENDLMLYWKNGND 234
Query: 207 VRGVEEAQLPQFTILGHETN-DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIV 265
+E L QF + + + +TG Y RL ++F L+R+I +F+ QTY P++L+V
Sbjct: 235 SLRTDEIVLSQFFVEDFQPSFGLAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMV 294
Query: 266 MLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVF 325
MLSWVSFWI+ A ARV+LGITTVLTM+TI TGV +S+P++SYVKA+DIYL F+FVF
Sbjct: 295 MLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVSASMPQVSYVKAVDIYLWASFLFVF 354
Query: 326 AALLEYAAVNYSYWADRAKKKPKAKEPT 353
+++EYAAVNY + KK AK P+
Sbjct: 355 LSVIEYAAVNYFTTVEEMKKLKNAKIPS 382
>gi|121579|sp|P22771.1|GLRA2_RAT RecName: Full=Glycine receptor subunit alpha-2; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
Length = 452
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 145/288 (50%), Positives = 201/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+ YT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|301607057|ref|XP_002933116.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Xenopus (Silurana) tropicalis]
Length = 418
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 210/312 (67%), Gaps = 7/312 (2%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF- 108
QLL +D +RP FGG + VG+D+ I S DSISEV MD+T+T+YL YWKD+RL+F
Sbjct: 16 QLLRIDDHDFAMRPGFGGSAIPVGIDVQIESIDSISEVDMDFTMTLYLRHYWKDERLSFQ 75
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S+ + +T G +KIWVPD FF + K SF+HD T N ++R+ DG++ + +R T T
Sbjct: 76 STNNRSMTFDGRLIKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNVLFSLRITVTA 135
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHE-T 225
C MD +PLD QNC++E+ESY Y D+++YWK ++ E L QF I +
Sbjct: 136 MCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKRGNESLKTDEHIALSQFFIEEFSAS 195
Query: 226 NDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAL 285
N +TG Y RL ++F L+R+I +F+ Q+Y P++L+VMLSWVSFWI+ A ARV+L
Sbjct: 196 NGLAFYSSTGWYNRLFINFILRRHIFFFLLQSYFPAMLMVMLSWVSFWIDRRAVPARVSL 255
Query: 286 GITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK 345
GITTVLTM+TI TGV +S+P++SY+KA+D+YL + F+FVF +++EYAAVNY A+ K+
Sbjct: 256 GITTVLTMSTIITGVSASMPQVSYIKAVDVYLWISFLFVFLSVIEYAAVNYLTTAEERKQ 315
Query: 346 -KPKAKEPTPLG 356
K + K L
Sbjct: 316 LKRRGKSSATLN 327
>gi|126336876|ref|XP_001364655.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Monodelphis
domestica]
Length = 452
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 145/288 (50%), Positives = 201/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E L QF + LG+ T
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLSQFILKEEKELGYCT--- 233
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 234 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 292
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|348543243|ref|XP_003459093.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Oreochromis niloticus]
Length = 468
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 149/303 (49%), Positives = 203/303 (66%), Gaps = 9/303 (2%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG P+ VG+D+ + S DSISEV+MD+T+T+YL YWKD+RLAF S ++
Sbjct: 72 HDFAMRPGFGGAPIPVGIDVQVESIDSISEVNMDFTMTLYLRHYWKDERLAFPSGNNQSR 131
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T +KIWVPD FF + K SF+HD T N ++R+ DG I Y +R T T C MD
Sbjct: 132 TFDSRLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGKILYSVRVTVTALCSMDFS 191
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTILGHETNDRKEKLA- 233
+PLD QNC++E+ESY Y D+++YWK +E L QF I E LA
Sbjct: 192 SFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRTDEIVLSQFFI---EHFQASSGLAF 248
Query: 234 ---TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTV 290
TG Y RL ++F L+R+I +F+ QTY P++L+V+LSWVSFWI+ A ARV+LGITTV
Sbjct: 249 YSSTGWYNRLFITFILRRHIFFFMLQTYFPTMLMVVLSWVSFWIDRRAVPARVSLGITTV 308
Query: 291 LTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAK 350
LTM+TI TGV +S+P++SYVKA+DIYL F+FVF +++EYAAVNY + +K + K
Sbjct: 309 LTMSTIITGVSASMPQVSYVKAVDIYLWTSFLFVFLSVIEYAAVNYCTTLEEMRKMKRGK 368
Query: 351 EPT 353
P+
Sbjct: 369 IPS 371
>gi|62751765|ref|NP_001015618.1| gamma-aminobutyric acid receptor subunit pi precursor [Bos taurus]
gi|75057875|sp|Q5EA06.1|GBRP_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit pi; AltName:
Full=GABA(A) receptor subunit pi; Flags: Precursor
gi|59857891|gb|AAX08780.1| gamma-aminobutyric acid (GABA) A receptor, pi [Bos taurus]
gi|296475941|tpg|DAA18056.1| TPA: gamma-aminobutyric acid receptor subunit pi precursor [Bos
taurus]
gi|440891307|gb|ELR45079.1| Gamma-aminobutyric acid receptor subunit pi [Bos grunniens mutus]
Length = 440
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 148/303 (48%), Positives = 202/303 (66%), Gaps = 5/303 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L GY+ LRPNFGG+P+ + + L +AS SISE +MDYT T+YL Q W D RL F +
Sbjct: 44 LTAGYNKFLRPNFGGEPVQIALTLDVASISSISESNMDYTATIYLRQRWTDQRLVFEG-N 102
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC M
Sbjct: 103 KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNM 162
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T+ +
Sbjct: 163 DLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQQYFTSVTRS 222
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTV 290
+ TG Y RL L F+LQRN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TTV
Sbjct: 223 QQETGNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTV 282
Query: 291 LTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK-KPK 348
L+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K + K
Sbjct: 283 LSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDRGK 342
Query: 349 AKE 351
AKE
Sbjct: 343 AKE 345
>gi|47226189|emb|CAG08336.1| unnamed protein product [Tetraodon nigroviridis]
Length = 677
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 144/288 (50%), Positives = 200/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 281 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRLNVFLRQKWNDPRLAYREYPDDS 340
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ DGS+ Y +R T L+C MDL
Sbjct: 341 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQDGSVLYSIRLTLILSCPMDL 400
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W E PV+ ++ LPQF + LG+ T
Sbjct: 401 KNFPMDIQTCTMQLESFGYTMNDLIFEWLSENPVQVADDLTLPQFVLKEEKDLGYCT--- 457
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGIT
Sbjct: 458 -KYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGIT 516
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 517 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 564
>gi|395542375|ref|XP_003773108.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit alpha-3
[Sarcophilus harrisii]
Length = 481
Score = 296 bits (758), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 144/285 (50%), Positives = 201/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 72 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 131
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 132 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 191
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 192 KNFPMDVQTCIMQLESFGYTMNDLIFQWQDEAPVQVAEGLTLPQF-VLKEEKDLRYCTKH 250
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 251 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 310
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 311 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 355
>gi|440904075|gb|ELR54641.1| Glycine receptor subunit alpha-1, partial [Bos grunniens mutus]
Length = 443
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/318 (46%), Positives = 210/318 (66%), Gaps = 12/318 (3%)
Query: 30 LRLCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFD 82
L L K A R A+ + S L GYD R+RPNF G P+ V ++ I SF
Sbjct: 4 LSLAASKEAEAARSASKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFG 63
Query: 83 SISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLH 141
SI+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H
Sbjct: 64 SIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFH 123
Query: 142 DVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMY 201
++T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++
Sbjct: 124 EITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFE 183
Query: 202 WKET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTY 258
W+E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y
Sbjct: 184 WQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 242
Query: 259 LPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLV 318
+PS+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++
Sbjct: 243 IPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA 302
Query: 319 MCFVFVFAALLEYAAVNY 336
+C +FVF+ALLEYAAVN+
Sbjct: 303 VCLLFVFSALLEYAAVNF 320
>gi|301770749|ref|XP_002920804.1| PREDICTED: glycine receptor subunit alpha-1-like [Ailuropoda
melanoleuca]
Length = 469
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/328 (46%), Positives = 212/328 (64%), Gaps = 12/328 (3%)
Query: 20 SQIGNSDSEKLRLCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYV 72
S++G K L K A R A + S L GYD R+RPNF G P+ V
Sbjct: 28 SRVGPMVQLKRHLAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNV 87
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTF 131
++ I SF SI+E +MDY + ++L Q W D RLA++ D+ L L + IW PD F
Sbjct: 88 SCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLF 147
Query: 132 FANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY 191
FAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+
Sbjct: 148 FANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESF 207
Query: 192 GYTVLDVVMYWKETPVRGVEEA-QLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQR 248
GYT+ D++ W+E V + LPQF IL E + R + TG + + F L+R
Sbjct: 208 GYTMNDLIFEWQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLER 266
Query: 249 NIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS 308
+GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++S
Sbjct: 267 QMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVS 326
Query: 309 YVKAIDIYLVMCFVFVFAALLEYAAVNY 336
YVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 327 YVKAIDIWMAVCLLFVFSALLEYAAVNF 354
>gi|281344247|gb|EFB19831.1| hypothetical protein PANDA_011706 [Ailuropoda melanoleuca]
Length = 479
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/306 (48%), Positives = 202/306 (66%), Gaps = 10/306 (3%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-L 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +
Sbjct: 87 HDFSMRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSM 146
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T C MD
Sbjct: 147 TFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFS 206
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQLPQFTILGHETNDRKE----K 231
+PLD Q C++EIESY YT D+++YWK +G + + + L H
Sbjct: 207 RFPLDTQTCSLEIESYAYTEDDLMLYWK----KGNDSLKTDERISLSHWGVGGGGGVILH 262
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
G Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVL
Sbjct: 263 FRKGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVL 322
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
TM+TI TGV +S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY + +R ++K + K
Sbjct: 323 TMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLREK 382
Query: 351 EPTPLG 356
P G
Sbjct: 383 LPCTCG 388
>gi|432877241|ref|XP_004073116.1| PREDICTED: glycine receptor subunit alpha-4-like [Oryzias latipes]
Length = 486
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/288 (50%), Positives = 200/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D
Sbjct: 47 GYDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQNWNDPRLAYSEYPDNS 106
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ DGS+ Y +R T L+C MDL
Sbjct: 107 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQDGSVLYSIRLTLILSCPMDL 166
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ ++ LPQF + LG+ T
Sbjct: 167 KNFPMDIQTCTMQLESFGYTMNDLIFEWLSDNPVQVADDLTLPQFVLKEEKDLGYCT--- 223
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGIT
Sbjct: 224 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGIT 282
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 283 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 330
>gi|301621138|ref|XP_002939917.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 450
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/288 (50%), Positives = 201/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RL++S D+
Sbjct: 55 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQTWNDPRLSYSEYPDDS 114
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 115 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 174
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q C +++ES+GYT+ D++ W T PV+ + LPQF + LG+ T
Sbjct: 175 KNFPMDVQTCAMQLESFGYTMNDLIFEWLSTSPVQVADGLTLPQFILKEENELGYCT--- 231
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 232 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 290
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 291 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 338
>gi|268833702|ref|NP_001161371.1| glycine receptor subunit alpha-2 precursor [Danio rerio]
gi|262478803|gb|ACY68415.1| glycine receptor alpha 2 subunit [Danio rerio]
Length = 448
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/288 (50%), Positives = 199/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D
Sbjct: 54 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQKWNDPRLAYSEYPDSS 113
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R+ DG++ Y +R T L+C MDL
Sbjct: 114 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLYSIRLTLILSCPMDL 173
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ + LPQF I LG+ T
Sbjct: 174 KNFPMDVQTCTMQLESFGYTMNDLIFEWLDKGPVQVADGLTLPQFLIRDEKDLGYCT--- 230
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 231 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 289
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYA VN+
Sbjct: 290 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAGVNF 337
>gi|327279422|ref|XP_003224455.1| PREDICTED: glycine receptor subunit alpha-1-like [Anolis
carolinensis]
Length = 548
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/285 (49%), Positives = 199/285 (69%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+ D+
Sbjct: 150 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQTWNDPRLAYHEFPDDA 209
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 210 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISKNGNVLYSIRITLTLACPMDL 269
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTILGHETN--DRKEK 231
+P+D Q C +++ES+GYT+ D++ W K V+ E LPQF IL E + D ++
Sbjct: 270 KNFPMDVQTCIMQLESFGYTMNDLIFKWQKANAVQIAEGLTLPQF-ILKEEKDLRDCTKE 328
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV LGITTVL
Sbjct: 329 YNTGMFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 388
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 389 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 433
>gi|363728585|ref|XP_428531.3| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Gallus gallus]
Length = 461
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/311 (46%), Positives = 210/311 (67%), Gaps = 10/311 (3%)
Query: 54 LHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSED 112
+ +D LRP FGG P+ VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S+++
Sbjct: 60 IEDHDFALRPGFGGSPIPVGIDVQVESIDSISEVDMDFTMTLYLRHYWKDERLSFRSTKN 119
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ +T G +KIWVPD FF + K SF+HD T N ++R+ DG++ + +R T + C M
Sbjct: 120 KSMTFDGRLIKKIWVPDVFFVHSKRSFIHDTTVENVMLRVYPDGNVLFSLRITVSAMCFM 179
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKE 230
D +PLD QNC++E+ESY Y D+++YWK + E L QF I E
Sbjct: 180 DFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNESLSTDEHISLSQFFI---EEFSASS 236
Query: 231 KLA----TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
LA TG Y RLS++F L+R+I +FV Q+Y P++L+VMLSWVSF I+ A ARV+LG
Sbjct: 237 GLAFYSSTGWYNRLSINFALRRHIFFFVLQSYFPAMLMVMLSWVSFGIDRRAVPARVSLG 296
Query: 287 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKK 346
ITTVLTM+TI TGV +S+P++SY+KA+D+YL + F+FVF +++EYAAVNY + K+
Sbjct: 297 ITTVLTMSTIITGVSASMPQVSYIKAVDVYLWISFLFVFLSVIEYAAVNYLTTIEERKQL 356
Query: 347 PKAKEPTPLGN 357
K + + + N
Sbjct: 357 KKRGKASGMYN 367
>gi|2388693|gb|AAB70007.1| GABA-A receptor delta subunit [Homo sapiens]
Length = 452
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/306 (49%), Positives = 211/306 (68%), Gaps = 6/306 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 47 LIAGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 106
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 107 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 166
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILG-HETNDRK 229
DL YP+D Q C +++ESYGY+ D+V YW E+ + G+++ QL QFTI H T +
Sbjct: 167 DLAKYPMDEQECMLDLESYGYSSEDIVYYWSESQEHIHGLDKLQLAQFTITSYHFTTELM 226
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 227 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 286
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-RAKKKPK 348
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ AD R K+K K
Sbjct: 287 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN--ADYRKKQKAK 344
Query: 349 AKEPTP 354
K P
Sbjct: 345 VKVSRP 350
>gi|410966112|ref|XP_003989580.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta, partial
[Felis catus]
Length = 439
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/302 (50%), Positives = 208/302 (68%), Gaps = 6/302 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + + +AS D ISEV+M+YT+T++L+Q W+D RLA++ +
Sbjct: 34 LIEGYARNFRPGIGGPPVNVALAIEVASIDHISEVNMEYTMTVFLHQSWRDSRLAYNHTN 93
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 94 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 153
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILG-HETNDRK 229
DL YP+D Q C + +ESYGY+ D+V YW E + G+ + QL QFTI H +
Sbjct: 154 DLAKYPMDEQECMLHLESYGYSSEDIVYYWSENQEQIHGLNKLQLAQFTITSYHFATELM 213
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F+L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV+LGITT
Sbjct: 214 NFKSAGQFPRLSLHFRLRRNRGVYIIQSYMPSILLVAMSWVSFWISQAAVPARVSLGITT 273
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-RAKKKPK 348
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ AD R K+K K
Sbjct: 274 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN--ADYRKKQKAK 331
Query: 349 AK 350
K
Sbjct: 332 VK 333
>gi|301621136|ref|XP_002939916.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 450
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/288 (50%), Positives = 201/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RL++S D+
Sbjct: 55 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQTWNDPRLSYSEYPDDS 114
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 115 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 174
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q C +++ES+GYT+ D++ W T PV+ + LPQF + LG+ T
Sbjct: 175 KNFPMDVQTCAMQLESFGYTMNDLIFEWLSTSPVQVADGLTLPQFILKEENELGYCT--- 231
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 232 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 290
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 291 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 338
>gi|301623311|ref|XP_002940962.1| PREDICTED: glycine receptor subunit alpha-1-like, partial [Xenopus
(Silurana) tropicalis]
Length = 354
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/287 (50%), Positives = 201/287 (70%), Gaps = 5/287 (1%)
Query: 54 LHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-ED 112
+ GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D
Sbjct: 50 ISGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRLNIFLRQQWNDPRLAYSEYPD 109
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ L L + IW PD FFAN+K + H++T NKL+R+ +G++ Y +R T TLAC M
Sbjct: 110 DSLDLDPSMLDSIWKPDLFFANEKGANFHEITTDNKLLRIFKNGNVLYSIRLTLTLACPM 169
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--K 229
DL +P+D Q C +++ES+GYT+ D++ W+E V+ E LPQF IL E + R
Sbjct: 170 DLKNFPMDVQTCIMQLESFGYTMNDLIFEWEEVGAVQVAEGLTLPQF-ILKEEKDLRYCT 228
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ +TG + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGITT
Sbjct: 229 KHYSTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITT 288
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
VLTMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 289 VLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 335
>gi|326928291|ref|XP_003210314.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Meleagris gallopavo]
Length = 613
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/299 (48%), Positives = 198/299 (66%), Gaps = 4/299 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L GY+ LRP FGG+P+ + M L +AS SISE MDYT T+YL Q W D RL F +
Sbjct: 211 LTMGYNKYLRPYFGGEPVQIAMSLDVASISSISESDMDYTATIYLRQRWTDPRLVFHG-N 269
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ TL E +WVPDT+ K SFLHDVT N+L+RL +G+I Y +R TTT+AC M
Sbjct: 270 KSFTLDARLVELLWVPDTYIVESKRSFLHDVTVGNRLIRLFSNGTILYALRITTTVACNM 329
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY DV+ W V G+E+ +L Q+T+ + T K
Sbjct: 330 DLSKYPMDTQTCRLQLESWGYDENDVIFTWLRGNDSVHGIEKLRLSQYTVERYYTLISKS 389
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTV 290
+ TG+Y RL L F+L+RN+ YF+ +TY+PS L+VMLSWVSFWI ++ AR +G+TTV
Sbjct: 390 QQETGSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTV 449
Query: 291 LTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPK 348
L+MTT+ G RSSL + + ++KAID+YL +CF F+F AL+EYA +YS R K P+
Sbjct: 450 LSMTTLMIGSRSSLSKTNCFIKAIDVYLGICFTFIFGALVEYAVAHYSSSQKRTAKTPQ 508
>gi|149726160|ref|XP_001503680.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Equus
caballus]
Length = 449
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 149/316 (47%), Positives = 209/316 (66%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARVALGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|297666681|ref|XP_002811644.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Pongo
abelii]
Length = 428
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/306 (49%), Positives = 212/306 (69%), Gaps = 6/306 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 23 LIAGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 82
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 83 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 142
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +++ESYGY+ D+V YW E+ + G+++ QL QFTI + T +
Sbjct: 143 DLAKYPMDEQECMLDLESYGYSSEDIVYYWSESQEHIHGLDKLQLAQFTITSYRFTTELM 202
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F+L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 203 NFKSAGQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 262
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-RAKKKPK 348
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ AD R K+K K
Sbjct: 263 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN--ADYRKKQKAK 320
Query: 349 AKEPTP 354
K P
Sbjct: 321 VKVSRP 326
>gi|432098837|gb|ELK28332.1| Glycine receptor subunit alpha-1 [Myotis davidii]
Length = 460
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 151/330 (45%), Positives = 212/330 (64%), Gaps = 13/330 (3%)
Query: 19 ESQIGNSDSEKLRL-CHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPL 70
+ Q ++S RL K A R A + S L GYD R+RPNF G P+
Sbjct: 17 KPQSAQNNSSPFRLLAASKEADAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPV 76
Query: 71 YVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPD 129
V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+ L L + IW PD
Sbjct: 77 NVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPD 136
Query: 130 TFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIE 189
FFAN+K + H++T NKL+R++ G++ Y +R T TLAC MDL +P+D Q C +++E
Sbjct: 137 LFFANEKGAHFHEITTDNKLLRISRSGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLE 196
Query: 190 SYGYTVLDVVMYWKETPVRGVEEA-QLPQFTILGHETNDR--KEKLATGTYQRLSLSFKL 246
S+GYT+ D++ W+E V + LPQF IL E + R + TG + + F L
Sbjct: 197 SFGYTMNDLIFEWQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHL 255
Query: 247 QRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPR 306
+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP+
Sbjct: 256 ERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPK 315
Query: 307 ISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 316 VSYVKAIDIWMAVCLLFVFSALLEYAAVNF 345
>gi|449267244|gb|EMC78210.1| Gamma-aminobutyric acid receptor subunit pi [Columba livia]
Length = 445
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 200/312 (64%), Gaps = 4/312 (1%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRP FGGDP+ + M L +AS SISE MDYT T+YL Q W D RL F
Sbjct: 42 NLTMGYNKYLRPYFGGDPVQIAMTLDVASISSISESDMDYTATIYLQQRWTDPRLVFHG- 100
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
++ +L E +WVPDT+ K SFLHDVT N+L+RL +G+I Y +R TTT+AC
Sbjct: 101 NKSFSLDARLVELLWVPDTYIVESKRSFLHDVTVGNRLIRLFSNGTILYALRITTTVACN 160
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
MDL YP+D Q C +++ES+GY DVV W V G+E+ QL Q+T+ + T K
Sbjct: 161 MDLSKYPMDTQTCRLQLESWGYDENDVVFTWLRGNDSVHGLEKLQLSQYTVEHYYTLVSK 220
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
++ TG Y RL L F+L+RN+ YF+ +TY+PS L+VMLSWVSFWI ++ AR +G+TT
Sbjct: 221 SQMETGNYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTT 280
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPK 348
VL+MTT+ G RSSL + + ++KAID+YL +CF F+F AL+EYA +YS K P+
Sbjct: 281 VLSMTTLMIGSRSSLSKTNCFIKAIDVYLGICFSFIFGALVEYAMAHYSSSQKCGAKAPQ 340
Query: 349 AKEPTPLGNYIR 360
L +R
Sbjct: 341 EGPANELTKEMR 352
>gi|348536058|ref|XP_003455514.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Oreochromis
niloticus]
Length = 449
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 197/288 (68%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D
Sbjct: 53 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSKYPDSS 112
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R+ DG++ Y +R T L+C MDL
Sbjct: 113 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLYSIRLTLILSCPMDL 172
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA-QLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D+V W E V E LPQF + LG+ T
Sbjct: 173 KNFPMDVQTCTMQLESFGYTMNDLVFEWLENGAVQVSEGLTLPQFIMRDEKELGYCT--- 229
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 230 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 288
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYA VN+
Sbjct: 289 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAGVNF 336
>gi|351707767|gb|EHB10686.1| Glycine receptor subunit alpha-1 [Heterocephalus glaber]
Length = 464
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 209/316 (66%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSAPKSMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|291416480|ref|XP_002724475.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, delta,
partial [Oryctolagus cuniculus]
Length = 434
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/306 (49%), Positives = 210/306 (68%), Gaps = 6/306 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISEV+M+YT+T++L+Q W+D RL+++
Sbjct: 24 LVEGYARNFRPGIGGPPVNVALALEVASIDHISEVNMEYTMTVFLHQSWRDSRLSYNHTS 83
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG + Y +R T+T+AC M
Sbjct: 84 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVVLYSIRITSTVACDM 143
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +E+ESYGY+ D+V YW E + G++ QL QFTI + + +
Sbjct: 144 DLAKYPMDEQECMLELESYGYSSEDIVYYWSENQEQIHGLDRLQLAQFTITSYRFSTELM 203
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F+L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 204 NFKSAGQFPRLSLHFRLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 263
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-RAKKKPK 348
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ AD R K+K K
Sbjct: 264 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN--ADYRRKRKAK 321
Query: 349 AKEPTP 354
K P
Sbjct: 322 VKVTKP 327
>gi|432933168|ref|XP_004081837.1| PREDICTED: glycine receptor subunit alpha-2-like [Oryzias latipes]
Length = 453
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/288 (51%), Positives = 197/288 (68%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D
Sbjct: 58 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSKYPDSS 117
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R+ DG++ Y +R T L+C MDL
Sbjct: 118 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLYSIRLTLILSCPMDL 177
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA-QLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D+V W E V E LPQF + LG+ T
Sbjct: 178 KNFPMDVQTCTMQLESFGYTMNDLVFEWLEYGAVQVSEGLTLPQFIMKEEKELGYCT--- 234
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 235 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 293
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYA VN+
Sbjct: 294 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAGVNF 341
>gi|27805793|ref|NP_776746.1| glycine receptor subunit alpha-1 precursor [Bos taurus]
gi|12644526|sp|P57695.1|GLRA1_BOVIN RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|10180959|gb|AAG14346.1|AF268375_1 glycine receptor alpha 1 subunit [Bos taurus]
gi|296485141|tpg|DAA27256.1| TPA: glycine receptor subunit alpha-1 precursor [Bos taurus]
Length = 457
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 209/316 (66%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A+ + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSASKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|149726162|ref|XP_001503682.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Equus
caballus]
Length = 457
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 149/316 (47%), Positives = 209/316 (66%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARVALGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|426229948|ref|XP_004009045.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Ovis aries]
Length = 457
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 209/316 (66%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A+ + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSASKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|426220599|ref|XP_004004502.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit alpha-3
[Ovis aries]
Length = 480
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/285 (50%), Positives = 201/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G + V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 72 GYDARIRPNFKGPAVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 131
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 132 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 191
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 192 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 250
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 251 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 310
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 311 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 355
>gi|281339746|gb|EFB15330.1| hypothetical protein PANDA_009579 [Ailuropoda melanoleuca]
Length = 435
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 149/318 (46%), Positives = 209/318 (65%), Gaps = 12/318 (3%)
Query: 30 LRLCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFD 82
L L K A R A + S L GYD R+RPNF G P+ V ++ I SF
Sbjct: 4 LSLAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFG 63
Query: 83 SISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLH 141
SI+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H
Sbjct: 64 SIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFH 123
Query: 142 DVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMY 201
++T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++
Sbjct: 124 EITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFE 183
Query: 202 WKET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTY 258
W+E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y
Sbjct: 184 WQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 242
Query: 259 LPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLV 318
+PS+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++
Sbjct: 243 IPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA 302
Query: 319 MCFVFVFAALLEYAAVNY 336
+C +FVF+ALLEYAAVN+
Sbjct: 303 VCLLFVFSALLEYAAVNF 320
>gi|426229946|ref|XP_004009044.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Ovis aries]
Length = 449
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 209/316 (66%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A+ + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSASKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|395840823|ref|XP_003793251.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Otolemur
garnettii]
Length = 451
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 151/306 (49%), Positives = 211/306 (68%), Gaps = 6/306 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 47 LMAGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 106
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 107 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 166
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +++ESYGY+ DVV YW ++ + G+++ QL QFTI + T +
Sbjct: 167 DLAKYPMDKQECVLDLESYGYSSEDVVYYWSDSQEHIHGLDKLQLAQFTITSYRFTTELM 226
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV+LGITT
Sbjct: 227 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSILLVAMSWVSFWISQAAVPARVSLGITT 286
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-RAKKKPK 348
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ AD R K+K K
Sbjct: 287 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN--ADYRKKQKAK 344
Query: 349 AKEPTP 354
K P
Sbjct: 345 VKVTKP 350
>gi|118097444|ref|XP_425210.2| PREDICTED: glycine receptor subunit alpha-1 [Gallus gallus]
Length = 570
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/285 (49%), Positives = 199/285 (69%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 172 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDS 231
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 232 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 291
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA-QLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V + LPQF IL E + R +
Sbjct: 292 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVADGLTLPQF-ILKEEKDLRYCTKH 350
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV LGITTVL
Sbjct: 351 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 410
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 411 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 455
>gi|358413362|ref|XP_003582551.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Bos taurus]
gi|359067890|ref|XP_003586404.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Bos taurus]
Length = 462
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/285 (50%), Positives = 201/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G + V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPAVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|410914369|ref|XP_003970660.1| PREDICTED: glycine receptor subunit alpha-4-like [Takifugu
rubripes]
Length = 455
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/288 (50%), Positives = 200/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRLNVFLRQKWNDPRLAYREYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ DGS+ Y +R T L+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQDGSVLYSIRLTLILSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W E PV+ ++ LPQF + LG+ T
Sbjct: 176 KNFPMDIQTCTMQLESFGYTMNDLIFEWLSENPVQVADDLTLPQFVLKEEKDLGYCT--- 232
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGIT
Sbjct: 233 -KYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGIT 291
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 292 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 339
>gi|350594490|ref|XP_003134181.3| PREDICTED: glycine receptor subunit alpha-1-like isoform 1 [Sus
scrofa]
Length = 456
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 209/316 (66%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A+ + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSASKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|194669246|ref|XP_614803.4| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Bos taurus]
gi|297477618|ref|XP_002689498.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Bos taurus]
gi|296484973|tpg|DAA27088.1| TPA: glycine receptor, alpha 3-like [Bos taurus]
Length = 447
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/285 (50%), Positives = 201/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G + V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPAVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|440908969|gb|ELR58936.1| Glycine receptor subunit alpha-3, partial [Bos grunniens mutus]
Length = 462
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/285 (50%), Positives = 201/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G + V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPAVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|114550671|ref|XP_001156161.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Pan
troglodytes]
gi|397471538|ref|XP_003807346.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Pan
paniscus]
gi|426327485|ref|XP_004024548.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Gorilla
gorilla gorilla]
gi|119576541|gb|EAW56137.1| gamma-aminobutyric acid (GABA) A receptor, delta [Homo sapiens]
Length = 428
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 150/306 (49%), Positives = 211/306 (68%), Gaps = 6/306 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 23 LIAGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 82
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 83 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 142
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +++ESYGY+ D+V YW E+ + G+++ QL QFTI + T +
Sbjct: 143 DLAKYPMDEQECMLDLESYGYSSEDIVYYWSESQEHIHGLDKLQLAQFTITSYRFTTELM 202
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 203 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 262
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-RAKKKPK 348
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ AD R K+K K
Sbjct: 263 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN--ADYRKKQKAK 320
Query: 349 AKEPTP 354
K P
Sbjct: 321 VKVSRP 326
>gi|31851|emb|CAA36258.1| inhibitory glycine receptor [Homo sapiens]
Length = 449
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSATKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|34734071|ref|NP_000806.2| gamma-aminobutyric acid receptor subunit delta precursor [Homo
sapiens]
gi|59802571|sp|O14764.2|GBRD_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit delta;
AltName: Full=GABA(A) receptor subunit delta; Flags:
Precursor
gi|21707470|gb|AAH33801.1| Gamma-aminobutyric acid (GABA) A receptor, delta [Homo sapiens]
gi|123982470|gb|ABM82976.1| gamma-aminobutyric acid (GABA) A receptor, delta [synthetic
construct]
gi|168277880|dbj|BAG10918.1| gamma-aminobutyric-acid receptor subunit delta precursor [synthetic
construct]
Length = 452
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 150/306 (49%), Positives = 211/306 (68%), Gaps = 6/306 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 47 LIAGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 106
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 107 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 166
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +++ESYGY+ D+V YW E+ + G+++ QL QFTI + T +
Sbjct: 167 DLAKYPMDEQECMLDLESYGYSSEDIVYYWSESQEHIHGLDKLQLAQFTITSYRFTTELM 226
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 227 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 286
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-RAKKKPK 348
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ AD R K+K K
Sbjct: 287 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN--ADYRKKQKAK 344
Query: 349 AKEPTP 354
K P
Sbjct: 345 VKVSRP 350
>gi|449268505|gb|EMC79369.1| Gamma-aminobutyric acid receptor subunit delta, partial [Columba
livia]
Length = 429
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/309 (47%), Positives = 213/309 (68%), Gaps = 4/309 (1%)
Query: 49 TISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF 108
+ L+ GY RP GG P+ V + + +AS D ISEV+M+YT+T++L+Q W+DDRL++
Sbjct: 20 NLDDLMKGYARNFRPGIGGPPVNVALAIEVASIDHISEVNMEYTMTVFLHQSWRDDRLSY 79
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
+ +E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+
Sbjct: 80 NHTNETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTV 139
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-T 225
AC MDL YP+D Q C +++ESYGY+ D+V +W E + G+++ QL QFTI ++ T
Sbjct: 140 ACDMDLSKYPMDEQECMLDLESYGYSSEDIVYHWSENQEEIHGLDKLQLAQFTITNYQFT 199
Query: 226 NDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAL 285
+ + G + RLSL F L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV+L
Sbjct: 200 TEMMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYVPSILLVAMSWVSFWISQSAVPARVSL 259
Query: 286 GITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSY-WADRAK 344
GITTVLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ + + K
Sbjct: 260 GITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFNADYMKKQK 319
Query: 345 KKPKAKEPT 353
K KA+ +
Sbjct: 320 NKIKARRQS 328
>gi|395737478|ref|XP_002817187.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Pongo
abelii]
Length = 492
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 150/295 (50%), Positives = 203/295 (68%), Gaps = 5/295 (1%)
Query: 67 GDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKI 125
G + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +T G +KI
Sbjct: 144 GPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKI 203
Query: 126 WVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCT 185
WVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD ++PLD+Q C+
Sbjct: 204 WVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCS 263
Query: 186 VEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKE-KLATGTYQRLSL 242
+E+ESY YT D+++YWK + ++ E+ L QF I T R +TG Y RL +
Sbjct: 264 LELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYI 323
Query: 243 SFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRS 302
+F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+LGITTVLTM+TI TGV +
Sbjct: 324 NFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNA 383
Query: 303 SLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
S+PR+SYVKA+DIYL + FVFVF ++LEYAAVNY + +R ++K K P G
Sbjct: 384 SMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKLPEKFPCMCG 438
>gi|327261515|ref|XP_003215575.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-1-like [Anolis carolinensis]
Length = 479
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 157/337 (46%), Positives = 217/337 (64%), Gaps = 12/337 (3%)
Query: 28 EKLRLCHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIAS 80
E + HK+ S +R ++T++ QLL +D +RP FGG + VG+D+ + S
Sbjct: 49 ETHEVSHKQGSPILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVES 108
Query: 81 FDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSF 139
DSISEV MD+T+T+YL YWKD+RL+F S+ ++ +T G +KIWVPD FF + K SF
Sbjct: 109 LDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNQSMTFDGRLVKKIWVPDMFFVHSKRSF 168
Query: 140 LHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVV 199
+HD T N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D++
Sbjct: 169 IHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLM 228
Query: 200 MYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQ 256
+YWK ++ E L QF I H T +TG Y RL ++F L+R+I +F+ Q
Sbjct: 229 LYWKNGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQ 288
Query: 257 TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY 316
TY P+ L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIY
Sbjct: 289 TYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIY 348
Query: 317 LVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKEP 352
L + FV LEYAAVNY + +R ++K + K P
Sbjct: 349 LWVSFVSSSFRYLEYAAVNYLATVQEREERKLRDKLP 385
>gi|291387674|ref|XP_002710218.1| PREDICTED: glycine receptor, alpha 1 (startle
disease/hyperekplexia, stiff man syndrome)-like
[Oryctolagus cuniculus]
Length = 449
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 13 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 72
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 73 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 132
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 133 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 192
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 193 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 251
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 252 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 311
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 312 LLFVFSALLEYAAVNF 327
>gi|350594488|ref|XP_003483909.1| PREDICTED: glycine receptor subunit alpha-1-like isoform 2 [Sus
scrofa]
Length = 448
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 209/316 (66%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A+ + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSASKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|395504924|ref|XP_003756796.1| PREDICTED: glycine receptor subunit alpha-1 [Sarcophilus harrisii]
Length = 450
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 141/285 (49%), Positives = 201/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 52 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDS 111
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 112 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 171
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V+ ++ LPQF IL E + R +
Sbjct: 172 KNFPMDVQTCIMQLESFGYTMNDLIFQWQEQGAVQVADDLTLPQF-ILKEEKDLRYCTKH 230
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV LGITTVL
Sbjct: 231 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 290
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 291 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 335
>gi|354493555|ref|XP_003508906.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-3-like [Cricetulus griseus]
Length = 468
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 203/294 (69%), Gaps = 12/294 (4%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF- 108
QLLH +D RP FGG P+ VG+D+ + S DSISEV+MD+T+T YL YWKD+RLAF
Sbjct: 63 QLLHIEDHDFSTRPGFGGSPVPVGIDVQVESIDSISEVNMDFTMTFYLRHYWKDERLAFP 122
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S+ ++ +T +KIWVPD FF + K SF+HD T N ++R++ DG++ + +R T +
Sbjct: 123 STTNKSMTFDHRLIQKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGNVLFSLRITVSA 182
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
C+MD +PLD QNC++E+ESY Y D+++YWK + E L QF I E
Sbjct: 183 MCLMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKHGNKSLNTEEHISLSQFFI---EEF 239
Query: 227 DRKEKLA----TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
LA TG Y RL ++F L+R+I +FV QTY P++L+VMLSWVSFWI+ A AR
Sbjct: 240 SASSGLAFYSSTGWYYRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPAR 299
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
V+LGITTVLTM+TI TGV +S+P++SY+KA+D+Y+ + +FVF +++EYAAVNY
Sbjct: 300 VSLGITTVLTMSTIVTGVSASMPQVSYIKAVDVYMWVSSLFVFLSVIEYAAVNY 353
>gi|334311152|ref|XP_001379288.2| PREDICTED: glycine receptor subunit alpha-1-like [Monodelphis
domestica]
Length = 532
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 141/285 (49%), Positives = 201/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 134 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDS 193
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 194 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 253
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V+ ++ LPQF IL E + R +
Sbjct: 254 KNFPMDVQTCIMQLESFGYTMNDLIFQWQEQGAVQVADDLTLPQF-ILKEEKDLRYCTKH 312
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV LGITTVL
Sbjct: 313 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 372
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 373 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 417
>gi|348536056|ref|XP_003455513.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Oreochromis
niloticus]
Length = 449
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 197/288 (68%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D
Sbjct: 53 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQKWNDPRLAYSKYPDSS 112
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R+ DG++ Y +R T L+C MDL
Sbjct: 113 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLYSIRLTLILSCPMDL 172
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA-QLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D+V W E V E LPQF + LG+ T
Sbjct: 173 KNFPMDVQTCTMQLESFGYTMNDLVFEWLENGAVQVSEGLTLPQFIMRDEKELGYCT--- 229
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 230 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 288
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYA VN+
Sbjct: 289 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAGVNF 336
>gi|115361507|gb|ABI95854.1| GABA-alpha subunit [Lepeophtheirus salmonis]
Length = 478
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 136/296 (45%), Positives = 194/296 (65%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ ++ GYD R+RPN+GG P+ VG+ + I S S+SEV MD+T+ MY Q+W+D
Sbjct: 9 NISAILNSFQMGYDKRVRPNYGGPPVTVGVTMYILSISSVSEVMMDFTLDMYFRQFWQDP 68
Query: 105 RLAFSSED--EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RL+F+ E L + ++ IWVPDTFF N+K ++ H T N+ +R+ G I +
Sbjct: 69 RLSFTGRPGLEKLVVGAEYIRLIWVPDTFFVNEKTAYFHKATTENQFLRILHTGEILRSI 128
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C MDL Y+P+D Q C +EIES+GYT+ D+ W + V+ + LPQF +
Sbjct: 129 RLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLNSVQISSDVSLPQFKV 188
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L+TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N A
Sbjct: 189 LGHRQKTIEASLSTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGAAP 248
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV LG+TTV TMTT+ ++LP+ISYVK+ID+YL CF VFA+LLEYA+V Y
Sbjct: 249 ARVGLGVTTVHTMTTLMASTNAALPKISYVKSIDVYLGACFFIVFASLLEYASVGY 304
>gi|332261398|ref|XP_003279759.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit delta [Nomascus leucogenys]
Length = 428
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 150/306 (49%), Positives = 211/306 (68%), Gaps = 6/306 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 23 LIAGYARXFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 82
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 83 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 142
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +++ESYGY+ D+V YW E+ + G+++ QL QFTI + T +
Sbjct: 143 DLAKYPMDEQECMLDLESYGYSSEDIVYYWSESQEHIHGLDKLQLAQFTITSYRFTTELM 202
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 203 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 262
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-RAKKKPK 348
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ AD R K+K K
Sbjct: 263 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN--ADYRKKQKAK 320
Query: 349 AKEPTP 354
K P
Sbjct: 321 VKVSRP 326
>gi|291385942|ref|XP_002709524.1| PREDICTED: Glycine receptor subunit alpha-3-like isoform 2
[Oryctolagus cuniculus]
Length = 449
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 143/285 (50%), Positives = 201/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ ++GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLGNFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|432926471|ref|XP_004080845.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Oryzias latipes]
Length = 470
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 204/300 (68%), Gaps = 3/300 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE-DEVL 115
+D +RP FGG + VG+D+ + S DSISEV+MD+T+T+YL YWKD+RL+F S ++
Sbjct: 74 HDFAMRPGFGGAAIPVGIDVQVESIDSISEVNMDFTMTLYLRHYWKDERLSFPSRTNQSR 133
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T +KIWVPD FF + K SF+HD T N ++R+ DG+I Y +R T T C MD
Sbjct: 134 TFDSRLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILYSVRVTVTALCSMDFS 193
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTILG-HETNDRKEKLA 233
+PLD QNC++E+ESY Y D+++YWK +E L QF I H ++ +
Sbjct: 194 SFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRTDEIVLSQFFIEHFHASSGLAFYSS 253
Query: 234 TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTM 293
TG Y RL ++F L+R+I +F+ QTY P++L+V+LSWVSFWI+ A ARV+LG+TTVLTM
Sbjct: 254 TGWYNRLFINFILRRHIFFFMLQTYFPTMLMVVLSWVSFWIDRRAVPARVSLGMTTVLTM 313
Query: 294 TTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPT 353
+TI TGV SS+P++SYVKA+DIYL F+FVF +++EYAAVNY + +K + K P+
Sbjct: 314 STIITGVSSSMPQVSYVKAVDIYLWTSFLFVFLSVIEYAAVNYCTTLEEMRKMRRGKIPS 373
>gi|225903367|ref|NP_001139512.1| glycine receptor subunit alpha-1 isoform 1 precursor [Homo sapiens]
gi|114603001|ref|XP_001169235.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pan
troglodytes]
gi|397517674|ref|XP_003829032.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Pan
paniscus]
gi|426350696|ref|XP_004042905.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Gorilla
gorilla gorilla]
gi|116242495|sp|P23415.2|GLRA1_HUMAN RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|109732076|gb|AAI14948.1| GLRA1 protein [Homo sapiens]
Length = 457
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|291385940|ref|XP_002709523.1| PREDICTED: Glycine receptor subunit alpha-3-like isoform 1
[Oryctolagus cuniculus]
Length = 464
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 143/285 (50%), Positives = 201/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ ++GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLGNFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVL
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>gi|119372310|ref|NP_000162.2| glycine receptor subunit alpha-1 isoform 2 precursor [Homo sapiens]
gi|114602999|ref|XP_527090.2| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Pan
troglodytes]
gi|397517672|ref|XP_003829031.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pan
paniscus]
gi|426350694|ref|XP_004042904.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Gorilla
gorilla gorilla]
gi|49901658|gb|AAH74980.1| Glycine receptor, alpha 1 [Homo sapiens]
gi|119582061|gb|EAW61657.1| glycine receptor, alpha 1 (startle disease/hyperekplexia, stiff man
syndrome), isoform CRA_b [Homo sapiens]
gi|189053414|dbj|BAG35580.1| unnamed protein product [Homo sapiens]
Length = 449
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 207/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ETPVRGVEEA-QLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|431918064|gb|ELK17292.1| Glycine receptor subunit alpha-1 [Pteropus alecto]
Length = 443
Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 14 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 73
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 74 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 133
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 134 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 193
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 194 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 252
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 253 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 312
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 313 LLFVFSALLEYAAVNF 328
>gi|194208149|ref|XP_001495300.2| PREDICTED: gamma-aminobutyric acid receptor subunit delta-like
[Equus caballus]
Length = 546
Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 150/302 (49%), Positives = 209/302 (69%), Gaps = 6/302 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + + +AS D ISEV+M+YT+T++L+Q W+D RL+++ +
Sbjct: 141 LMEGYARNFRPGIGGPPVNVALAIEVASIDHISEVNMEYTMTVFLHQSWRDSRLSYNHTN 200
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 201 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 260
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C + +ESYGY+ D+V YW E + G+++ QL QFTI + T +
Sbjct: 261 DLAKYPMDEQECMLHLESYGYSSEDIVYYWSENQEQIHGLDKLQLAQFTITSYRFTTELM 320
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV+LGITT
Sbjct: 321 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSILLVAMSWVSFWISQAAVPARVSLGITT 380
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-RAKKKPK 348
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ AD R K+K K
Sbjct: 381 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN--ADYRKKQKAK 438
Query: 349 AK 350
K
Sbjct: 439 VK 440
>gi|60416032|gb|AAH90676.1| Glra4a protein [Danio rerio]
gi|262478805|gb|ACY68416.1| glycine receptor alpha 4a subunit [Danio rerio]
Length = 457
Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 149/322 (46%), Positives = 212/322 (65%), Gaps = 18/322 (5%)
Query: 29 KLRLCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASF 81
+L C ++ ++ R A + S L GYD R+RPNF G P+ V ++ I SF
Sbjct: 23 RLGSCKEEIKSSSRPAQKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSF 82
Query: 82 DSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFL 140
SI+E +MDY + ++L Q W D RLA+S D L L + IW PD FFAN+K +
Sbjct: 83 GSITETTMDYRLNVFLRQQWNDPRLAYSEYPDASLDLDPSMLDSIWKPDLFFANEKGANF 142
Query: 141 HDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVM 200
H+VT NKL+R+ +G++ Y +R T L+C MDL +P+D Q CT+++ES+GYT+ D++
Sbjct: 143 HEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIF 202
Query: 201 YW-KETPVRGVEEAQLPQFTI-----LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFV 254
W + PV+ ++ LPQF + LG+ T + TG + + + F L+R +GY++
Sbjct: 203 EWLSDNPVQVADDLTLPQFVLKEEKDLGYCT----KHYNTGKFTCIEVKFHLERQMGYYL 258
Query: 255 FQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID 314
Q Y+PS+LIV+LSWVSFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAID
Sbjct: 259 IQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAID 318
Query: 315 IYLVMCFVFVFAALLEYAAVNY 336
I++ +C +FVFAALLEYAAVN+
Sbjct: 319 IWMAVCLLFVFAALLEYAAVNF 340
>gi|326932329|ref|XP_003212272.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta-like
[Meleagris gallopavo]
Length = 428
Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 147/309 (47%), Positives = 213/309 (68%), Gaps = 4/309 (1%)
Query: 49 TISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF 108
+ L+ GY RP GG P+ V + + +AS D ISEV+M+YT+T++L+Q W+DDRL++
Sbjct: 19 NLDDLMKGYARNFRPGIGGPPVNVALAIEVASIDHISEVNMEYTMTVFLHQSWRDDRLSY 78
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
+ +E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+
Sbjct: 79 NHTNETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTV 138
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-T 225
AC MDL YP+D Q C +++ESYGY+ D+V +W E + G+++ QL QFTI ++ T
Sbjct: 139 ACDMDLSKYPMDEQECMLDLESYGYSSEDIVYHWSENQDEIHGLDKLQLAQFTITNYQFT 198
Query: 226 NDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAL 285
+ + G + RLSL F L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV+L
Sbjct: 199 TELMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYVPSILLVAMSWVSFWISQSAVPARVSL 258
Query: 286 GITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSY-WADRAK 344
GITTVLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ + + K
Sbjct: 259 GITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFNADYMKKQK 318
Query: 345 KKPKAKEPT 353
K KA+ +
Sbjct: 319 NKIKARRQS 327
>gi|444723710|gb|ELW64349.1| Glycine receptor subunit alpha-1 [Tupaia chinensis]
Length = 449
Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 207/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ETPVRGVEEA-QLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|326928546|ref|XP_003210438.1| PREDICTED: glycine receptor subunit alpha-1-like [Meleagris
gallopavo]
Length = 474
Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 141/285 (49%), Positives = 200/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 76 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDS 135
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 136 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 195
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V+ + LPQF IL E + R +
Sbjct: 196 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVADGLTLPQF-ILKEEKDLRYCTKH 254
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV LGITTVL
Sbjct: 255 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 314
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 315 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 359
>gi|148675854|gb|EDL07801.1| glycine receptor, alpha 1 subunit [Mus musculus]
Length = 430
Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 1 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 60
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 61 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 120
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 121 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 180
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 181 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 239
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 240 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 299
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 300 LLFVFSALLEYAAVNF 315
>gi|449486896|ref|XP_002197205.2| PREDICTED: gamma-aminobutyric acid receptor subunit delta
[Taeniopygia guttata]
Length = 452
Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 147/308 (47%), Positives = 213/308 (69%), Gaps = 4/308 (1%)
Query: 50 ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
+ L+ GY RP GG P+ V + + +AS D ISEV+M+YT+T++L+Q W+DDRL+++
Sbjct: 44 LDDLMKGYARNFRPGIGGPPVNVALAIEVASIDHISEVNMEYTMTVFLHQSWRDDRLSYN 103
Query: 110 SEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLA 169
+E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+A
Sbjct: 104 HTNETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVA 163
Query: 170 CMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-TN 226
C MDL YP+D Q C +++ESYGY+ D+V +W E + G+++ QL QFTI ++ T
Sbjct: 164 CDMDLSKYPMDEQECMLDLESYGYSSEDIVYHWSENQEEIHGLDKLQLAQFTITNYQFTT 223
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+ + G + RLSL F L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV+LG
Sbjct: 224 EIMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYVPSILLVAMSWVSFWISQSAVPARVSLG 283
Query: 287 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSY-WADRAKK 345
ITTVLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ + + K
Sbjct: 284 ITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFNADYMKKQKN 343
Query: 346 KPKAKEPT 353
K KA+ +
Sbjct: 344 KIKARRQS 351
>gi|291233005|ref|XP_002736450.1| PREDICTED: Glycine receptor, alpha 3-like [Saccoglossus
kowalevskii]
Length = 446
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 134/311 (43%), Positives = 212/311 (68%), Gaps = 3/311 (0%)
Query: 30 LRLCHK-KSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVS 88
L C++ ++ TT+ ++ + ++ YD R RPN G P+ + ++L I+SFDS++E +
Sbjct: 20 LVFCNRAQNNTTDYISEAGNVLDSIMLNYDKRFRPNMKGPPVIITLNLFISSFDSVTEST 79
Query: 89 MDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNK 148
MDY + ++L + W D RL F+ D + + GD A +W PD +F+N+K+ LHDVT N+
Sbjct: 80 MDYGVLIFLREQWNDPRLQFNDTDP-MVMHGDAATNLWKPDLYFSNEKSGHLHDVTTENR 138
Query: 149 LVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PV 207
L+R++ +G I R++ TL+C MD +PLD+Q C + +ESYGYT D++ W E PV
Sbjct: 139 LLRIHPNGDILLSSRYSLTLSCYMDFKKFPLDDQVCGMTMESYGYTTDDLLFLWDEPDPV 198
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
+ + LPQ+ I T + + TG++ L + F L R++GY++ Q YLPSIL+V+L
Sbjct: 199 QMEDNLTLPQYVIQKTTTENCTKSYITGSFTCLQVLFFLHRDVGYYILQAYLPSILLVVL 258
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWV+FWI ++A ARVALG+TT+LTMTT+ +G+R++LP+++Y KAIDI++ +C VFVF+A
Sbjct: 259 SWVAFWITYDAAPARVALGVTTILTMTTLDSGIRATLPKVAYAKAIDIWMAVCQVFVFSA 318
Query: 328 LLEYAAVNYSY 338
L+E+A VNY +
Sbjct: 319 LVEFAVVNYVH 329
>gi|291400826|ref|XP_002716794.1| PREDICTED: gamma-aminobutyric acid (GABA) receptor, rho 3
[Oryctolagus cuniculus]
Length = 468
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 144/294 (48%), Positives = 203/294 (69%), Gaps = 12/294 (4%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
QLLH +D +RP FGG P+ VG+D+ + S DSISEV+MD+T+T YL YWKD+RL+F
Sbjct: 63 QLLHIEEHDFAMRPGFGGSPVPVGIDVQVESIDSISEVNMDFTMTFYLRHYWKDERLSFP 122
Query: 110 SE-DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S ++ +T +KIWVPD FF + K SF+HD T N ++R++ DG++ + +R T +
Sbjct: 123 SRTNKSMTFDHRLIKKIWVPDVFFVHSKRSFIHDTTVENIMLRVHPDGNVLFSLRITVSA 182
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
C MD +PLD QNC++E+ESY Y+ D+++YWK + E L QF + E
Sbjct: 183 MCFMDFTRFPLDTQNCSLELESYAYSEEDLMLYWKHGNKSLNTEEHISLSQFFV---EEF 239
Query: 227 DRKEKLA----TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
LA TG Y RL ++F L+R+I +FV QTY P++L+VMLSWVSFWI+ A AR
Sbjct: 240 SASSGLAFYSSTGWYYRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPAR 299
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
V+LGITTVLTM+TI TGV +S+P++SY+KA+D+YL + +FVF +++EYAAVNY
Sbjct: 300 VSLGITTVLTMSTIVTGVSASMPQVSYIKAVDVYLWVSSLFVFLSVIEYAAVNY 353
>gi|118101018|ref|XP_001234041.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Gallus
gallus]
Length = 775
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/300 (49%), Positives = 210/300 (70%), Gaps = 5/300 (1%)
Query: 50 ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
+ L+ GY RP GG P+ V + + +AS D ISEV+M+YT+T++L+Q W+DDRL+++
Sbjct: 20 LDDLMKGYARNFRPGIGGPPVNVALAIEVASIDHISEVNMEYTMTVFLHQSWRDDRLSYN 79
Query: 110 SEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLA 169
+E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+A
Sbjct: 80 HTNETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVA 139
Query: 170 CMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-TN 226
C MDL YP+D Q C +++ESYGY+ D+V +W E + G+++ QL QFTI ++ T
Sbjct: 140 CDMDLSKYPMDEQECMLDLESYGYSSEDIVYHWSENQDEIHGLDKLQLAQFTITNYQFTT 199
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+ + G + RLSL F L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV+LG
Sbjct: 200 ELMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYVPSILLVAMSWVSFWISQSAVPARVSLG 259
Query: 287 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKK 346
ITTVLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ AD KK+
Sbjct: 260 ITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN--ADYMKKQ 317
>gi|449267128|gb|EMC78094.1| Glycine receptor subunit alpha-1, partial [Columba livia]
Length = 452
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 141/285 (49%), Positives = 199/285 (69%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 54 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDS 113
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 114 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 173
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA-QLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V + LPQF IL E + R +
Sbjct: 174 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVADGLTLPQF-ILKEEKDLRYCTKH 232
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV LGITTVL
Sbjct: 233 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 292
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 293 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 337
>gi|47230062|emb|CAG10476.1| unnamed protein product [Tetraodon nigroviridis]
Length = 447
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/307 (48%), Positives = 205/307 (66%), Gaps = 8/307 (2%)
Query: 55 HGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDE 113
H YD P G P+ VG+D+ + S D+ISEV MD+T+T+YL YWKD+RL+F S+ ++
Sbjct: 50 HDYDT---PGSAGPPIPVGVDVQVESLDTISEVDMDFTMTLYLRHYWKDERLSFQSTNNQ 106
Query: 114 VLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMD 173
+T +KIWVPD FF + K SF+HD T N ++R+ DG++ Y +R T T C MD
Sbjct: 107 SMTFDSRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVYPDGNVLYSLRVTVTAMCNMD 166
Query: 174 LHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKE 230
L +PLD Q C++EIESY YT D+++YWK+ + + L QF I H T
Sbjct: 167 LSRFPLDTQTCSLEIESYAYTDDDLMLYWKKGNESLNTDDRISLSQFLIQKFHTTTKLAF 226
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTV 290
+TG Y RL + F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTV
Sbjct: 227 YSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTV 286
Query: 291 LTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKA 349
LTM+TI TGV +S+PR+SY+KA+DIYL + FVFVF +++EYAAVNY S +R ++K +
Sbjct: 287 LTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLSTVQERKERKLRE 346
Query: 350 KEPTPLG 356
+ P G
Sbjct: 347 RLPCTCG 353
>gi|334349706|ref|XP_001373416.2| PREDICTED: gamma-aminobutyric acid receptor subunit delta
[Monodelphis domestica]
Length = 428
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/304 (49%), Positives = 211/304 (69%), Gaps = 6/304 (1%)
Query: 50 ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
+ L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++
Sbjct: 20 LDDLMEGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDGRLSYN 79
Query: 110 SEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLA 169
+E L L F +K+W+PDTF N K+++ HDVT NKL+RL +G I Y +R T+T+A
Sbjct: 80 HTNETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPNGVILYSIRITSTVA 139
Query: 170 CMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-TN 226
C MDL YP+D Q C +++ESYGY+ D+V YW E + G+++ QL QFTI ++ T
Sbjct: 140 CDMDLSKYPMDEQECMLDLESYGYSSEDIVYYWSENQEQIHGLDKLQLAQFTITNYQFTT 199
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+ + G + RLSL F L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV+LG
Sbjct: 200 ELMNFKSAGQFPRLSLHFNLRRNRGVYIIQSYVPSILLVAMSWVSFWISQSAVPARVSLG 259
Query: 287 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKK 346
ITTVLTMTT+ RSSLPR S +KA+D+Y MC+VFVFAAL+EYA +++ AD KK+
Sbjct: 260 ITTVLTMTTLMVSARSSLPRASAIKALDVYFWMCYVFVFAALVEYAFAHFN--ADYMKKQ 317
Query: 347 PKAK 350
KAK
Sbjct: 318 -KAK 320
>gi|213513249|ref|NP_001133361.1| Gamma-aminobutyric acid receptor subunit delta [Salmo salar]
gi|209151957|gb|ACI33090.1| Gamma-aminobutyric acid receptor subunit delta precursor [Salmo
salar]
Length = 462
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/308 (49%), Positives = 216/308 (70%), Gaps = 12/308 (3%)
Query: 50 ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
+ +L+ GY RP GG P+ V M + +AS D ISE +M+YT+T++L Q W+DDRL+++
Sbjct: 45 LDELMKGYARNFRPGIGGPPVNVAMAIEVASIDHISEANMEYTMTIFLRQSWRDDRLSYN 104
Query: 110 SEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLA 169
++ L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y R T+T+A
Sbjct: 105 HTNKTLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSSRITSTVA 164
Query: 170 CMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGH---- 223
C MDL YP+D Q C +++ESYGY+ D+V +W E+ + G+++ +L QFTI+ +
Sbjct: 165 CDMDLTKYPMDEQECMLDLESYGYSSEDIVYHWCESQIHIHGLDKLELSQFTIIDYKFVT 224
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
ET + K + G + RLSL F+L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV
Sbjct: 225 ETMNFK---SAGRFPRLSLRFQLRRNRGVYIIQSYMPSILLVAMSWVSFWISQTAVPARV 281
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-R 342
+LGITTVLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +Y+ AD R
Sbjct: 282 SLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALIEYAFAHYN--ADYR 339
Query: 343 AKKKPKAK 350
K+K K+K
Sbjct: 340 LKEKAKSK 347
>gi|55250367|gb|AAH85599.1| Glra4b protein, partial [Danio rerio]
Length = 532
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/288 (49%), Positives = 199/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+ D+
Sbjct: 96 GYDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYKEYPDDS 155
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 156 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMDL 215
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W E PV+ ++ LPQF + LG+ T
Sbjct: 216 KNFPMDTQTCTMQLESFGYTMNDLIFQWLDEGPVQVADDLMLPQFVLKEEKDLGYCT--- 272
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+L V+LSWVSFWIN +A ARV LGIT
Sbjct: 273 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGIT 331
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 332 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 379
>gi|297676459|ref|XP_002816153.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Pongo
abelii]
Length = 457
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|119582060|gb|EAW61656.1| glycine receptor, alpha 1 (startle disease/hyperekplexia, stiff man
syndrome), isoform CRA_a [Homo sapiens]
Length = 422
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 141/285 (49%), Positives = 200/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 16 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDS 75
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 76 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 135
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V+ + LPQF IL E + R +
Sbjct: 136 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKH 194
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV LGITTVL
Sbjct: 195 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 254
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 255 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 299
>gi|297676457|ref|XP_002816152.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pongo
abelii]
Length = 449
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|440897658|gb|ELR49302.1| Gamma-aminobutyric acid receptor subunit rho-3 [Bos grunniens
mutus]
Length = 418
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/306 (48%), Positives = 205/306 (66%), Gaps = 12/306 (3%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
Q+LH +D +RP FGG P+ VG+D+ + S DSISEV MD+T+T YL YWKD+RLAF
Sbjct: 16 QILHIEDHDFAMRPGFGGSPVPVGIDVQVESIDSISEVDMDFTMTFYLRHYWKDERLAFP 75
Query: 110 SE-DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S+ ++ +T +KIWVPD FF + K SF+HD T N ++R++ DGS+ + +R T +
Sbjct: 76 SKTNKSMTFDHRLIKKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGSVLFSVRITVSA 135
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
C MD +PLD QNC++E+ESY Y D+++YWK + E L QF I E
Sbjct: 136 MCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKHGNKSLNTDEHISLSQFFI---EEF 192
Query: 227 DRKEKLA----TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
A TG Y RL ++F L+R+I +FV QTY P++L+VMLSWVSFWI+ A AR
Sbjct: 193 SASSGFAFYSSTGWYNRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPAR 252
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADR 342
V+LGITTVLTM+TI +GV +S+P++SY+KA+D+YL + +FVF +++EYAAVNY +
Sbjct: 253 VSLGITTVLTMSTILSGVSASMPQVSYIKAVDVYLWVSSLFVFLSVIEYAAVNYLTTVEE 312
Query: 343 AKKKPK 348
KK K
Sbjct: 313 FKKTRK 318
>gi|158295190|ref|XP_316071.4| AGAP006028-PA [Anopheles gambiae str. PEST]
gi|157015916|gb|EAA44137.4| AGAP006028-PA [Anopheles gambiae str. PEST]
Length = 555
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 201/296 (67%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + GYD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 53 NISAILDSFSVGYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 112
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 113 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 172
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +WK+ + V E +LPQF +
Sbjct: 173 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWKDGLSSVGMSSEVELPQFRV 232
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 233 LGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 292
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 293 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 348
>gi|12644459|sp|Q64018.2|GLRA1_MOUSE RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|9247216|gb|AAB32158.2| inhibitory glycine receptor alpha 1 subunit long form [Mus sp.]
Length = 457
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|403285576|ref|XP_003934098.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 457
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/321 (45%), Positives = 214/321 (66%), Gaps = 9/321 (2%)
Query: 20 SQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIA 79
S ++++E R K + ++ L + S GYD R+RPNF G P+ V ++ I
Sbjct: 19 SLAASNEAEAARSAPKPMSPSDFLDKLMGRTS----GYDARIRPNFKGPPVNVSCNIFIN 74
Query: 80 SFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNS 138
SF SI+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K +
Sbjct: 75 SFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGA 134
Query: 139 FLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDV 198
H++T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D+
Sbjct: 135 HFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDL 194
Query: 199 VMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVF 255
+ W+E V+ + LPQF IL E + R + TG + + F L+R +GY++
Sbjct: 195 IFEWQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLI 253
Query: 256 QTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDI 315
Q Y+PS+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI
Sbjct: 254 QMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDI 313
Query: 316 YLVMCFVFVFAALLEYAAVNY 336
++ +C +FVF+ALLEYAAVN+
Sbjct: 314 WMAVCLLFVFSALLEYAAVNF 334
>gi|297295509|ref|XP_002804635.1| PREDICTED: glycine receptor subunit alpha-1-like isoform 2 [Macaca
mulatta]
gi|345799501|ref|XP_003434572.1| PREDICTED: glycine receptor subunit alpha-1 [Canis lupus
familiaris]
gi|355691772|gb|EHH26957.1| hypothetical protein EGK_17048 [Macaca mulatta]
gi|355750348|gb|EHH54686.1| hypothetical protein EGM_15574 [Macaca fascicularis]
Length = 457
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|296193299|ref|XP_002744457.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Callithrix
jacchus]
Length = 457
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|302565620|ref|NP_001181426.1| glycine receptor subunit alpha-1 precursor [Macaca mulatta]
gi|73953614|ref|XP_546290.2| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Canis lupus
familiaris]
Length = 449
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|296193297|ref|XP_002744456.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Callithrix
jacchus]
Length = 449
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|410949421|ref|XP_003981420.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Felis catus]
Length = 457
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEADAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|56181507|gb|AAV83800.1| glycine receptor alpha 1 variant [Rattus norvegicus]
Length = 419
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEADAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|12230887|sp|P07727.4|GLRA1_RAT RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|56469|emb|CAA38987.1| inhibitory glycine receptor alpha-1 subunit [Rattus norvegicus]
gi|13548657|emb|CAC35979.1| glycine receptor alpha 1 [Rattus norvegicus]
gi|149052670|gb|EDM04487.1| glycine receptor, alpha 1 subunit, isoform CRA_a [Rattus
norvegicus]
Length = 457
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEADAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|321267538|ref|NP_001189440.1| glycine receptor, alpha 4b precursor [Danio rerio]
Length = 492
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/288 (49%), Positives = 199/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+ D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYKEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W E PV+ ++ LPQF + LG+ T
Sbjct: 176 KNFPMDTQTCTMQLESFGYTMNDLIFQWLDEGPVQVADDLMLPQFVLKEEKDLGYCT--- 232
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+L V+LSWVSFWIN +A ARV LGIT
Sbjct: 233 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGIT 291
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 292 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 339
>gi|300795702|ref|NP_001179448.1| gamma-aminobutyric acid receptor subunit rho-3 precursor [Bos
taurus]
gi|296491566|tpg|DAA33609.1| TPA: gamma-aminobutyric acid receptor subunit rho-3-like [Bos
taurus]
Length = 468
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/294 (48%), Positives = 201/294 (68%), Gaps = 12/294 (4%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
Q+LH +D +RP FGG P+ VG+D+ + S DSISEV MD+T+T YL YWKD+RLAF
Sbjct: 63 QILHIEDHDFAMRPGFGGSPVPVGIDVQVESIDSISEVDMDFTMTFYLRHYWKDERLAFP 122
Query: 110 SE-DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S+ ++ +T +KIWVPD FF + K SF+HD T N ++R++ DGS+ + +R T +
Sbjct: 123 SKTNKSMTFDHRLIKKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGSVLFSVRITVSA 182
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
C MD +PLD QNC++E+ESY Y D+++YWK + E L QF I E
Sbjct: 183 MCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKHGNKSLNTDEHISLSQFFI---EEF 239
Query: 227 DRKEKLA----TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
A TG Y RL ++F L+R+I +FV QTY P++L+VMLSWVSFWI+ A AR
Sbjct: 240 SASSGFAFYSSTGWYNRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPAR 299
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
V+LGITTVLTM+TI +GV +S+P++SY+KA+D+YL + +FVF +++EYAAVNY
Sbjct: 300 VSLGITTVLTMSTILSGVSASMPQVSYIKAVDVYLWVSSLFVFLSVIEYAAVNY 353
>gi|158295192|ref|XP_001688775.1| AGAP006028-PB [Anopheles gambiae str. PEST]
gi|157015917|gb|EDO63781.1| AGAP006028-PB [Anopheles gambiae str. PEST]
Length = 555
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 198/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + GYD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 53 NISAILDSFSVGYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 112
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 113 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 172
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 173 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 232
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 233 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 292
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 293 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 348
>gi|403285574|ref|XP_003934097.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 449
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/321 (45%), Positives = 214/321 (66%), Gaps = 9/321 (2%)
Query: 20 SQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIA 79
S ++++E R K + ++ L + S GYD R+RPNF G P+ V ++ I
Sbjct: 19 SLAASNEAEAARSAPKPMSPSDFLDKLMGRTS----GYDARIRPNFKGPPVNVSCNIFIN 74
Query: 80 SFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNS 138
SF SI+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K +
Sbjct: 75 SFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGA 134
Query: 139 FLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDV 198
H++T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D+
Sbjct: 135 HFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDL 194
Query: 199 VMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVF 255
+ W+E V+ + LPQF IL E + R + TG + + F L+R +GY++
Sbjct: 195 IFEWQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLI 253
Query: 256 QTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDI 315
Q Y+PS+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI
Sbjct: 254 QMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDI 313
Query: 316 YLVMCFVFVFAALLEYAAVNY 336
++ +C +FVF+ALLEYAAVN+
Sbjct: 314 WMAVCLLFVFSALLEYAAVNF 334
>gi|363733515|ref|XP_003641258.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-1-like [Gallus gallus]
Length = 536
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/258 (55%), Positives = 188/258 (72%), Gaps = 3/258 (1%)
Query: 43 LANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWK 102
++ V +T +LLHGYDIRL P+FGG P+ VGM + IAS D +SEV+ DYT+TMY Q W+
Sbjct: 113 MSYVKETXDRLLHGYDIRLGPDFGGPPVDVGMRIEIASIDVVSEVNTDYTLTMYFQQSWR 172
Query: 103 DDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
+ RL +S LTL A+ +WV DT+F NDKNSF+ V + + ++ + DG++ YG+
Sbjct: 173 EKRLPYSGISLNLTLDNRAADHLWVSDTYFQNDKNSFVQGVMVKKQTIQYHPDGTVLYGL 232
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTI 220
R TT ACMMDLH YPLD QNCT+EI SYGYT D+ YW ++ V GV +LPQF+I
Sbjct: 233 RITTA-ACMMDLHRYPLDEQNCTLEISSYGYTTNDIEFYWNGGKSAVTGVSNIELPQFSI 291
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+ ++T ++ + TGTY +LSLSF L+RN GYF QT++PS LI +LS VSFWIN++A++
Sbjct: 292 VDYKTVSKRVEFPTGTYPQLSLSFWLKRNTGYFTLQTHMPSTLITILSRVSFWINNDASA 351
Query: 281 ARVALGITTVLTMTTIST 298
ARVALGITTVLTMTTIST
Sbjct: 352 ARVALGITTVLTMTTIST 369
>gi|403297709|ref|XP_003939695.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Saimiri
boliviensis boliviensis]
Length = 430
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/302 (49%), Positives = 210/302 (69%), Gaps = 6/302 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 23 LIAGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 82
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 83 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 142
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +++ESYGY+ D+V YW E+ + G+++ QL QFTI + T +
Sbjct: 143 DLAKYPMDEQECMLDLESYGYSSEDIVYYWSESQEHIHGLDKLQLAQFTITSYRFTTELM 202
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 203 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 262
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-RAKKKPK 348
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ AD R K+K K
Sbjct: 263 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN--ADYRKKQKQK 320
Query: 349 AK 350
K
Sbjct: 321 TK 322
>gi|755778|emb|CAA68378.1| glycine receptor strychnine binding subunit [Rattus norvegicus]
Length = 427
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 141/285 (49%), Positives = 199/285 (69%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 29 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDS 88
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 89 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 148
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA-QLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V + LPQF IL E + R +
Sbjct: 149 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKH 207
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV LGITTVL
Sbjct: 208 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 267
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 268 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 312
>gi|449474917|ref|XP_002195083.2| PREDICTED: glycine receptor subunit alpha-1 [Taeniopygia guttata]
Length = 450
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/285 (49%), Positives = 200/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 52 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDS 111
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 112 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 171
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V+ + LPQF IL E + R +
Sbjct: 172 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVADGLTLPQF-ILKEEKDLRYCTKH 230
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV LGITTVL
Sbjct: 231 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 290
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 291 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 335
>gi|1363141|pir||B49970 glycine receptor alpha-2 chain - mouse
Length = 451
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/288 (50%), Positives = 200/288 (69%), Gaps = 12/288 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GY R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GY-ARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T
Sbjct: 176 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT--- 232
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 233 -KHYNTGKFTCIEVKFHLDRQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 291
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 292 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 339
>gi|225659|prf||1309300A Gly receptor
Length = 427
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/285 (49%), Positives = 199/285 (69%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 29 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDS 88
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 89 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 148
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA-QLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V + LPQF IL E + R +
Sbjct: 149 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKH 207
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV LGITTVL
Sbjct: 208 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 267
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 268 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 312
>gi|402873157|ref|XP_003900452.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit alpha-1
[Papio anubis]
Length = 481
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/318 (46%), Positives = 208/318 (65%), Gaps = 12/318 (3%)
Query: 30 LRLCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFD 82
L L K A R A + S L GYD R+RPNF G P+ V ++ I SF
Sbjct: 50 LSLAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFG 109
Query: 83 SISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLH 141
SI+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H
Sbjct: 110 SIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFH 169
Query: 142 DVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMY 201
++T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++
Sbjct: 170 EITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFE 229
Query: 202 WKET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTY 258
W+E V+ + LPQF L E + R + TG + + F L+R +GY++ Q Y
Sbjct: 230 WQEQGAVQVADGLTLPQFX-LKEEKDLRYCXKHYNTGKFTCIEARFHLERQMGYYLIQMY 288
Query: 259 LPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLV 318
+PS+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++
Sbjct: 289 IPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA 348
Query: 319 MCFVFVFAALLEYAAVNY 336
+C +FVF+ALLEYAAVN+
Sbjct: 349 VCLLFVFSALLEYAAVNF 366
>gi|410949419|ref|XP_003981419.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Felis catus]
Length = 449
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEADAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|410970262|ref|XP_003991605.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Felis
catus]
Length = 468
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/348 (43%), Positives = 221/348 (63%), Gaps = 27/348 (7%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLH--GYDIRLRPNFGGDPLYVGMDL 76
E+++ N+DS K L K QLLH +D +RP FGG P+ VG+D+
Sbjct: 45 ETRMRNNDSTKAWLLKYK---------------QLLHIEDHDFAMRPGFGGSPVPVGIDV 89
Query: 77 TIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFAND 135
I S DSISEV+MD+T+T YL YWKD+RL+F S+ ++ +T +KIWVPD FF +
Sbjct: 90 QIESLDSISEVNMDFTMTFYLRHYWKDERLSFPSTTNKSMTFDHRLIKKIWVPDIFFVHS 149
Query: 136 KNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTV 195
K SF+HD T N ++R+ DG++ + +R T + C MD +PLD QNC++E+ESY YT
Sbjct: 150 KRSFIHDTTVENIMLRVYPDGNVLFSLRITVSAMCFMDFSRFPLDTQNCSLELESYAYTE 209
Query: 196 LDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEKLA----TGTYQRLSLSFKLQRN 249
D+++YWK + E L QF + E A TG Y RL ++F L+R+
Sbjct: 210 EDLMLYWKHGNKSLNTDEHISLSQFFV---EEFSASSGFAFYSSTGWYNRLFINFVLRRH 266
Query: 250 IGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISY 309
I +FV QTY P++L+VMLSWVSFWI+ A ARV+LGITTVLTM+TI +G+ +S+P++SY
Sbjct: 267 IFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIISGMSASMPQVSY 326
Query: 310 VKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPTPLGN 357
+KA+D+YL + +FVF +++EYAAVNY + K+ K + + + N
Sbjct: 327 IKAVDVYLWVSSLFVFLSVIEYAAVNYLTTVEEWKQFKKTGKISGMYN 374
>gi|354474419|ref|XP_003499428.1| PREDICTED: glycine receptor subunit alpha-1-like [Cricetulus
griseus]
Length = 448
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/316 (47%), Positives = 207/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVHIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ETPVRGVEEA-QLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVGHGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +AT ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDATPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|426217333|ref|XP_004002908.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Ovis
aries]
Length = 468
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/311 (47%), Positives = 207/311 (66%), Gaps = 13/311 (4%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
Q+LH +D +RP FGG P+ VG+D+ + S DSISEV MD+T+T YL YWKD+RLAF
Sbjct: 63 QILHIEDHDFAMRPGFGGSPVPVGIDVQVESIDSISEVDMDFTMTFYLRHYWKDERLAFP 122
Query: 110 SE-DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S+ ++ +T EKIWVPD FF + K SF+HD N ++R++ DG++ + +R T +
Sbjct: 123 SKTNKSMTFDHRLIEKIWVPDIFFVHSKRSFIHDTAVENIMLRVHPDGNVLFSVRITVSA 182
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
C MD +PLD QNC++E+ESY Y D+++YWK + E L QF I E
Sbjct: 183 MCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKHGNKSLNTDEHISLSQFFI---EEF 239
Query: 227 DRKEKLA----TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
A TG Y RL ++F L+R+I +FV QTY P++L+VMLSWVSFWI+ A AR
Sbjct: 240 SASSGFAFYSSTGWYNRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPAR 299
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWAD 341
V+LGITTVLTM+TI +GV +S+P++SY+KA+D+YL + +FVF +++EYAAVNY + +
Sbjct: 300 VSLGITTVLTMSTILSGVSASMPQVSYIKAVDVYLWVSSLFVFLSVIEYAAVNYLTTVEE 359
Query: 342 RAKKKPKAKEP 352
R + K K P
Sbjct: 360 RKRFKKTGKIP 370
>gi|31982694|ref|NP_065238.2| glycine receptor subunit alpha-1 precursor [Mus musculus]
gi|9247215|gb|AAB32157.2| inhibitory glycine receptor alpha 1 subunit short form [Mus sp.]
gi|22535390|gb|AAM97291.1| glycine receptor alpha 1 subunit [Mus musculus]
gi|124297278|gb|AAI31950.1| Glycine receptor, alpha 1 subunit [Mus musculus]
gi|187952699|gb|AAI37726.1| Glycine receptor, alpha 1 subunit [Mus musculus]
Length = 449
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|158295194|ref|XP_316070.4| AGAP006028-PC [Anopheles gambiae str. PEST]
gi|157015918|gb|EAA44136.4| AGAP006028-PC [Anopheles gambiae str. PEST]
Length = 555
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 201/296 (67%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + GYD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 53 NISAILDSFSVGYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 112
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 113 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 172
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +WK+ + V E +LPQF +
Sbjct: 173 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWKDGLSSVGMSSEVELPQFRV 232
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 233 LGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 292
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 293 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 348
>gi|357607543|gb|EHJ65581.1| Gaba-gated chloride channel [Danaus plexippus]
Length = 474
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + L YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 6 NISAILDSLSVSYDKRVRPNYGGPPVDVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 65
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 66 RLAYKKRPGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 125
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C MDL Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 126 RLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 185
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 186 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 245
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 246 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 301
>gi|348551538|ref|XP_003461587.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta-like
[Cavia porcellus]
Length = 450
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/306 (49%), Positives = 209/306 (68%), Gaps = 6/306 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 47 LMEGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 106
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 107 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSVRITSTVACDM 166
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +++ESYGY+ D+V YW E + G++ QL QFTI + T +
Sbjct: 167 DLAKYPMDEQECMLDLESYGYSSEDIVYYWSENQEQIHGLDRLQLAQFTITSYRFTTELM 226
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 227 NFKSAGRFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 286
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-RAKKKPK 348
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ AD R K+K K
Sbjct: 287 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN--ADYRKKRKAK 344
Query: 349 AKEPTP 354
K P
Sbjct: 345 IKVTKP 350
>gi|321474710|gb|EFX85675.1| hypothetical protein DAPPUDRAFT_20229 [Daphnia pulex]
Length = 319
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 207/296 (69%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ ++ L GYD R+RPN+GG P+ + + + I + S+SEV+MD+T+ +Y Q+W DD
Sbjct: 1 NISGILNGLQVGYDKRVRPNYGGIPVQIQVSMGIITISSLSEVTMDFTLDVYFRQFWTDD 60
Query: 105 RLAFSSED--EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RL+F + E+L++S ++ +WVPDTFF N+K ++LH VT N+ VR+ DG IT M
Sbjct: 61 RLSFQRQRGVEILSVSTEYLRNMWVPDTFFPNEKTAYLHTVTTSNEFVRIRHDGEITRSM 120
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+PLD+Q C +EIES+G+T ++ W ++P V E +LPQF +
Sbjct: 121 RITITASCPMNLKYFPLDSQLCPIEIESFGFTTNEIWYKWVDSPKAVSIFPEVELPQFQV 180
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G+ + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFWIN A+
Sbjct: 181 MGYRKREYSYSLTTGNYSRLACDIQFVRSMGYYLIQIYIPSSLIVVISWVSFWINRNASP 240
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + + LP+ISYVK+IDIYL CFV VFA+LLEYAAV Y
Sbjct: 241 ARVSLGVTTVLTMTTLMSSTNAQLPKISYVKSIDIYLGTCFVMVFASLLEYAAVGY 296
>gi|6980950|ref|NP_037265.1| glycine receptor subunit alpha-1 precursor [Rattus norvegicus]
gi|220751|dbj|BAA00707.1| glycine receptor alpha 1 precursor [Rattus norvegicus]
gi|13548655|emb|CAC35978.1| glycine receptor alpha 1 precursor [Rattus norvegicus]
gi|149052671|gb|EDM04488.1| glycine receptor, alpha 1 subunit, isoform CRA_b [Rattus
norvegicus]
Length = 449
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEADAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|395529681|ref|XP_003766937.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta
[Sarcophilus harrisii]
Length = 479
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/304 (49%), Positives = 211/304 (69%), Gaps = 6/304 (1%)
Query: 50 ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
+ L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++
Sbjct: 71 LDDLMEGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYN 130
Query: 110 SEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLA 169
+E L L F +K+W+PDTF N K+++ HDVT NKL+RL +G I Y +R T+T+A
Sbjct: 131 HTNETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPNGVILYSIRITSTVA 190
Query: 170 CMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-TN 226
C MDL YP+D Q C +++ESYGY+ D+V YW E + G+++ QL QFTI ++ T
Sbjct: 191 CDMDLSKYPMDEQECMLDLESYGYSSEDIVYYWSENQEQIHGLDKLQLAQFTITNYQFTT 250
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+ + G + RLSL F L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV+LG
Sbjct: 251 ELMNFKSAGQFPRLSLHFNLRRNRGVYIIQSYMPSILLVAMSWVSFWISQSAVPARVSLG 310
Query: 287 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKK 346
ITTVLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ AD KK+
Sbjct: 311 ITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN--ADYMKKQ 368
Query: 347 PKAK 350
KAK
Sbjct: 369 -KAK 371
>gi|444525812|gb|ELV14162.1| Protein kinase C zeta type, partial [Tupaia chinensis]
Length = 980
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 151/306 (49%), Positives = 210/306 (68%), Gaps = 6/306 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 36 LVEGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 95
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 96 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 155
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +++ESYGY+ D+V YW E + G+++ QL QFTI + T +
Sbjct: 156 DLAKYPMDEQECMLDLESYGYSSEDIVYYWSENQEQIHGLDKLQLAQFTITSYRFTTELM 215
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV+LGITT
Sbjct: 216 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSILLVAMSWVSFWISQAAVPARVSLGITT 275
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-RAKKKPK 348
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ AD R K+K K
Sbjct: 276 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN--ADYRKKQKAK 333
Query: 349 AKEPTP 354
K P
Sbjct: 334 VKVTKP 339
>gi|326679648|ref|XP_689576.5| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Danio rerio]
Length = 471
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/319 (46%), Positives = 209/319 (65%), Gaps = 5/319 (1%)
Query: 35 KKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTIT 94
+K +T L Q + + +D +RP FGG + VG+D+ + S DSISEV+MD+T+T
Sbjct: 55 RKDSTKSLLIKTEQLLR--IEDHDFAMRPAFGGSAIPVGIDVQVESIDSISEVNMDFTMT 112
Query: 95 MYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
+YL YWKD+RLAF S + + T G +KIW PD FF + K SF+HD T N ++R+
Sbjct: 113 LYLRHYWKDERLAFPSSNNLSRTFDGRLVKKIWKPDVFFVHSKRSFIHDTTMENIMLRVY 172
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TPVRGVEE 212
DG+I Y +R T T C MD +PLD QNC++E+ESY Y D+++YWK +E
Sbjct: 173 PDGNILYSVRITVTSLCSMDFSRFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRTDE 232
Query: 213 AQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVS 271
L QF I H ++ +TG Y RL ++F L+R+I +F+ QTY P++L+V+LSWVS
Sbjct: 233 IALSQFFIEEFHVSHGLALYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVVLSWVS 292
Query: 272 FWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEY 331
FWI+ A ARV+LGITTVLTM+TI TGV +S+P++SYVKA+D+YL F+FVF ++EY
Sbjct: 293 FWIDRRAVPARVSLGITTVLTMSTIITGVSTSMPQVSYVKAVDVYLWTSFLFVFLTVIEY 352
Query: 332 AAVNYSYWADRAKKKPKAK 350
AAVNY + KK + K
Sbjct: 353 AAVNYFTTKEEMKKLKQLK 371
>gi|20302089|ref|NP_620252.1| gamma-aminobutyric acid receptor subunit rho-3 precursor [Rattus
norvegicus]
gi|1730196|sp|P50573.1|GBRR3_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit rho-3;
AltName: Full=GABA(A) receptor subunit rho-3; AltName:
Full=GABA(C) receptor; Flags: Precursor
gi|1060975|dbj|BAA09322.1| GABA receptor rho-3 subunit precursor [Rattus norvegicus]
gi|149060280|gb|EDM10994.1| gamma-aminobutyric acid (GABA) receptor, rho 3 [Rattus norvegicus]
gi|1587165|prf||2206298A GABA receptor:SUBUNIT=rho3
Length = 464
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 202/294 (68%), Gaps = 12/294 (4%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF- 108
QLLH +D RP FGG P+ VG+D+ + S DSISEV+MD+T+T YL YWKD+RL+F
Sbjct: 60 QLLHIEDHDFSTRPGFGGSPVPVGIDVQVESIDSISEVNMDFTMTFYLRHYWKDERLSFP 119
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S+ ++ +T +KIWVPD FF + K SF+HD T N ++R++ DG++ + +R T +
Sbjct: 120 STTNKSMTFDRRLIQKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGNVLFSLRITVSA 179
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
C MD +PLD QNC++E+ESY Y D+++YWK + E L QF I E
Sbjct: 180 MCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKHGNKSLNTEEHISLSQFFI---EEF 236
Query: 227 DRKEKLA----TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
LA TG Y RL ++F L+R+I +FV QTY P++L+VMLSWVSFWI+ A AR
Sbjct: 237 SASSGLAFYSSTGWYYRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPAR 296
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
V+LGITTVLTM+TI TGV +S+P++SYVKA+D+Y+ + +FVF +++EYAAVNY
Sbjct: 297 VSLGITTVLTMSTIVTGVSASMPQVSYVKAVDVYMWVSSLFVFLSVIEYAAVNY 350
>gi|345307955|ref|XP_001508794.2| PREDICTED: glycine receptor subunit alpha-1 [Ornithorhynchus
anatinus]
Length = 477
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/285 (49%), Positives = 200/285 (70%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 73 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDS 132
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 133 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 192
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V+ + LPQF IL E + R +
Sbjct: 193 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKH 251
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV LGITTVL
Sbjct: 252 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 311
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 312 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 356
>gi|344252733|gb|EGW08837.1| Glycine receptor subunit alpha-1 [Cricetulus griseus]
Length = 413
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/285 (49%), Positives = 199/285 (69%), Gaps = 5/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 16 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVHIFLRQQWNDPRLAYNEYPDDS 75
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 76 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 135
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA-QLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V LPQF IL E + R +
Sbjct: 136 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVGHGLTLPQF-ILKEEKDLRYCTKH 194
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +AT ARV LGITTVL
Sbjct: 195 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDATPARVGLGITTVL 254
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 255 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 299
>gi|301344568|gb|ADK74004.1| GABA receptor [Chilo suppressalis]
Length = 496
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + L YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 42 NISAILDSLSVSYDKRVRPNYGGPPVDVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 101
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 102 RLAYKKRTGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 161
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C MDL Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 162 RLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 221
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 222 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 281
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 282 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 337
>gi|148694612|gb|EDL26559.1| gamma-aminobutyric acid (GABA-A) receptor, subunit theta [Mus
musculus]
Length = 629
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 134/312 (42%), Positives = 212/312 (67%), Gaps = 16/312 (5%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
A V + + ++L YD+RLRPNFG + ++S + ISE++MDYTITM+L+Q WKD
Sbjct: 57 AVVQKILDRVLSTYDVRLRPNFG---------VYVSSIEQISEINMDYTITMFLHQTWKD 107
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RLA+ + LTL EK+WVPD +F N K++F+HDVT N++ +L+ DG++ YG+R
Sbjct: 108 TRLAYYETNLNLTLDYRMHEKLWVPDCYFVNSKDAFVHDVTVENRVFQLHPDGTVRYGIR 167
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILG 222
TTT AC +DL +P+D Q+C +E+ESYGYTV D+V+ W+ + + + +PQ+T LG
Sbjct: 168 LTTTAACSLDLQKFPMDKQSCKLEVESYGYTVEDIVLSWEDDNAIHITDGLHIPQYTYLG 227
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
++ TG+Y RL + F++QR + ++ Q Y P++L +LSW+SFW+N+++++AR
Sbjct: 228 RTITSKEVYFYTGSYMRLIVKFQVQREVRSYLVQVYWPTVLTTILSWISFWMNYDSSAAR 287
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD- 341
V +G+T++L +TTI + +R LP IS +KAIDIY+++C FVF +LLEY +NY +++
Sbjct: 288 VTIGLTSILVLTTIDSHMRDKLPHISCIKAIDIYILVCLFFVFLSLLEYVYINYLFFSQV 347
Query: 342 -----RAKKKPK 348
R +KP+
Sbjct: 348 PRRNHRRCRKPR 359
>gi|11890616|gb|AAG41140.1| glycine receptor alpha 1 subunit isoform b [Bos taurus]
Length = 449
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 147/316 (46%), Positives = 207/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A+ + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSASKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D R A++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRXAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLXRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|224503958|gb|ACN53551.1| gamma-aminobutyric acid receptor isoform 3a [Plutella xylostella]
Length = 490
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + L YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 12 NISAILDSLSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 71
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 72 RLAYKKRPGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 131
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C MDL Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 132 RLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 191
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 192 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 251
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 252 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 307
>gi|224503959|gb|ACN53552.1| gamma-aminobutyric acid receptor isoform 3b [Plutella xylostella]
Length = 490
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + L YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 12 NISAILDSLSVSYDKRVRPNYGGPPVDVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 71
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 72 RLAYKKRPGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 131
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C MDL Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 132 RLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 191
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 192 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 251
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 252 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 307
>gi|11890617|gb|AAG41141.1| glycine receptor alpha 1 subunit isoform a [Bos taurus]
Length = 457
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 147/316 (46%), Positives = 207/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A+ + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSASKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E +MDY + ++L Q W D R A++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTMDYRVNIFLRQQWNDPRXAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLXRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|297670546|ref|XP_002813426.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Pongo
abelii]
Length = 467
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/363 (42%), Positives = 224/363 (61%), Gaps = 14/363 (3%)
Query: 6 IIRIPDFNSENELESQIGNSDSEKLRLCHKKS--ATTERLANVTQTISQLLH--GYDIRL 61
II IP+ + + ++ S + C +++ +R Q QLLH D +
Sbjct: 15 IILIPNVCAASNIKMTHQRCSSSMKQTCKQETRMKKDDRTKVRPQKYEQLLHIEDDDFAM 74
Query: 62 RPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGD 120
RP FGG P+ VG+D+ + S DSISE +MD+T+T YL YWKD+RL+F S+ ++ +T
Sbjct: 75 RPGFGGSPVPVGIDVHVESIDSISETNMDFTMTFYLRHYWKDERLSFPSTANKSMTFDHR 134
Query: 121 FAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLD 180
KIWVPD FF + K SF+HD T N ++R++ DG++ +R T + C MD +PLD
Sbjct: 135 LTRKIWVPDIFFVHSKRSFIHDTTMENIMLRVHPDGNVLLSLRITVSAMCFMDFSRFPLD 194
Query: 181 NQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEKLA----T 234
QNC++E+ESY Y D+++YWK + E L QF I E LA T
Sbjct: 195 TQNCSLELESYAYNEDDLMLYWKHGNRSLNAEEHMSLSQFFI---EDFSASSGLAFYSST 251
Query: 235 GTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 294
G Y RL ++F L+R++ +FV QTY P+IL+VMLSWVSFWI+ A ARV+LGITTVLTM+
Sbjct: 252 GWYNRLFINFVLRRHVFFFVLQTYFPAILMVMLSWVSFWIDRRAVPARVSLGITTVLTMS 311
Query: 295 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPTP 354
TI T V +S+P++SY+KA+D+YL + +FVF +++EYAAVNY + K+ K + +
Sbjct: 312 TIITAVSASMPQVSYLKAVDVYLWVSSLFVFLSVIEYAAVNYLTTVEERKQFKKTGKISR 371
Query: 355 LGN 357
+ N
Sbjct: 372 MYN 374
>gi|2245656|gb|AAB62563.1| GABA-gated chloride channel isoform a2 [Heliothis virescens]
Length = 496
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + L YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 42 NISAILDSLSVSYDKRVRPNYGGPPVDVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 101
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 102 RLAYKKRTGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 161
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C MDL Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 162 RLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 221
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 222 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 281
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 282 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 337
>gi|881590|gb|AAA68961.1| GABA receptor subunit [Aedes aegypti]
Length = 533
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 201/296 (67%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + GYD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 53 NISAILDSFSVGYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 112
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 113 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 172
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M L Y+P+D Q C +EIES+GYT+ D+ +WK+ + V E +LPQF +
Sbjct: 173 RLTITASCPMGLQYFPMDRQLCHIEIESFGYTMRDIRYFWKDGLSSVGMSSEVELPQFRV 232
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N +AT
Sbjct: 233 LGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRDATP 292
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 293 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 348
>gi|224496447|gb|ACN52600.1| gamma-aminobutyric acid receptor isoform 3b [Plutella xylostella]
Length = 520
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + L YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 42 NISAILDSLSVSYDKRVRPNYGGPPVDVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 101
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 102 RLAYKKRPGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 161
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C MDL Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 162 RLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 221
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 222 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 281
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 282 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 337
>gi|158255158|dbj|BAF83550.1| unnamed protein product [Homo sapiens]
Length = 452
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 149/306 (48%), Positives = 210/306 (68%), Gaps = 6/306 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 47 LIAGYARNFRPGIGGPPVNVALAPEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 106
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 107 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 166
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +++ESYGY+ D+V YW E+ + G+++ QL QFTI + T +
Sbjct: 167 DLAKYPMDEQECMLDLESYGYSSEDIVYYWSESQEHIHGLDKLQLAQFTITSYRFTTELM 226
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 227 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 286
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-RAKKKPK 348
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++ AD R K+K K
Sbjct: 287 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN--ADYRKKQKAK 344
Query: 349 AKEPTP 354
K P
Sbjct: 345 VKVSRP 350
>gi|118092885|ref|XP_426524.2| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like [Gallus
gallus]
Length = 441
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 148/306 (48%), Positives = 210/306 (68%), Gaps = 9/306 (2%)
Query: 49 TISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF 108
TI ++ GY+ LRP F P+ VGM L IAS D+ISE++MDYT T++L Q W D+RL F
Sbjct: 36 TIQNIIKGYNKYLRPFFDNGPVSVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLCF 95
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
++ L+L G E +WVPDTF + K SFLHD+T N+L+R+ +G++ Y +R TTT+
Sbjct: 96 DG-NKSLSLDGRLVEMLWVPDTFIVDSKKSFLHDITVENRLIRIYPNGTVLYAIRITTTV 154
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
AC MDL YP+D Q CT+++ES+GY + DV+ YW VRG++ QL Q+T+ H T+
Sbjct: 155 ACSMDLTKYPMDKQTCTLQLESWGYNINDVMFYWTRGNDSVRGLDTLQLAQYTVEDHFTS 214
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+ TG Y +L F+L+RNI YF+ +TY+PSIL+V+LSWVSFWI+ + AR+ +G
Sbjct: 215 VSEAVYETGRYPKLVFHFELKRNILYFILETYVPSILLVVLSWVSFWISQSSVPARICIG 274
Query: 287 ITTVLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK 345
+TTVLTMTT+ G R+SLP + ++KAID+YL +CF F+F ALLEYA ++ A
Sbjct: 275 VTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALLEYAVAHFC-----ALH 329
Query: 346 KPKAKE 351
+P +KE
Sbjct: 330 RPSSKE 335
>gi|410896852|ref|XP_003961913.1| PREDICTED: glycine receptor subunit alpha-2-like [Takifugu
rubripes]
Length = 454
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 145/288 (50%), Positives = 197/288 (68%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D
Sbjct: 59 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSKYPDPS 118
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 119 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 178
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA-QLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D+V W E V + LPQF + LG+ T
Sbjct: 179 KNFPMDVQTCTMQLESFGYTMNDLVFEWLENGAVQVSDGLTLPQFIMRDEKELGYCT--- 235
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 236 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 294
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYA VN+
Sbjct: 295 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAGVNF 342
>gi|326670382|ref|XP_700099.4| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Danio
rerio]
Length = 435
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/307 (48%), Positives = 212/307 (69%), Gaps = 6/307 (1%)
Query: 50 ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
+ L+ GY RP GG P+ V M + +AS D ISE +M+YT+T++L Q W+DDRL+++
Sbjct: 21 LDDLMKGYARNFRPGIGGPPVNVAMAIEVASIDHISEANMEYTMTVFLRQSWRDDRLSYN 80
Query: 110 SEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLA 169
++ L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y R T+T+A
Sbjct: 81 HTNKTLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSSRITSTVA 140
Query: 170 CMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHE-TN 226
C MDL YP+D Q C +++ESYGY+ D+V +W E+ + G+++ +L QFTI +
Sbjct: 141 CDMDLTKYPMDEQECMLDLESYGYSSEDIVYHWSESQKLIHGLDKLELSQFTITDYRFVT 200
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+ + G + RLSL F+L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV+LG
Sbjct: 201 EMMNFKSAGRFPRLSLRFQLRRNRGVYIIQSYMPSILLVAMSWVSFWISQSAVPARVSLG 260
Query: 287 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKK 346
ITTVLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +Y+ AD +KK+
Sbjct: 261 ITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALIEYAFAHYN--ADYSKKE 318
Query: 347 PKAKEPT 353
KAK T
Sbjct: 319 -KAKVKT 324
>gi|157118574|ref|XP_001653205.1| gaba receptor invertebrate [Aedes aegypti]
gi|108875659|gb|EAT39884.1| AAEL008354-PA [Aedes aegypti]
Length = 533
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/296 (48%), Positives = 201/296 (67%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + GYD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 53 NISAILDSFSVGYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWSDP 112
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 113 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 172
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +WK+ + V E +LPQF +
Sbjct: 173 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWKDGLSSVGMSSEVELPQFRV 232
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 233 LGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 292
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 293 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 348
>gi|114650274|dbj|BAF31884.1| GABA-gated chloride channel subunit [Laodelphax striatella]
Length = 487
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 40 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 99
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 100 RLAFRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 159
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 160 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKV 219
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 220 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 279
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 280 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 335
>gi|5725305|emb|CAB52398.1| unnamed protein product [Mus musculus]
Length = 457
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 147/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E ++DY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTIDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|167466290|ref|NP_001107764.1| GABA receptor isoform c precursor [Tribolium castaneum]
gi|156447607|gb|ABU63596.1| GABA-gated anion channel splice variant 3c6b [Tribolium castaneum]
Length = 482
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 36 NISAILDSFSVSYDKRVRPNYGGPPVVVGVTMYVLSISSLSEVQMDFTLDFYFRQFWTDP 95
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 96 RLAFRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 155
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 156 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKV 215
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 216 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 275
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 276 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 331
>gi|340716835|ref|XP_003396898.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
isoform 1 [Bombus terrestris]
Length = 477
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 43 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 102
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 103 RLAFKKRAGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 162
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 163 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKV 222
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 223 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 282
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 283 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 338
>gi|18858759|ref|NP_571477.1| glycine receptor subunit alphaZ1 precursor [Danio rerio]
gi|6647527|sp|O93430.1|GLRA1_DANRE RecName: Full=Glycine receptor subunit alphaZ1; Flags: Precursor
gi|3378596|emb|CAA06711.1| glycine receptor, alphaZ1 subunit [Danio rerio]
gi|190339620|gb|AAI62943.1| Glycine receptor, alpha 1 [Danio rerio]
gi|190339628|gb|AAI62956.1| Glycine receptor, alpha 1 [Danio rerio]
Length = 444
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 143/287 (49%), Positives = 199/287 (69%), Gaps = 5/287 (1%)
Query: 54 LHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-ED 112
+ GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D
Sbjct: 45 VSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPD 104
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ L L + IW PD FFAN+K + H+VT NKL+R++ +G++ Y +R T LAC M
Sbjct: 105 DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVLACPM 164
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--K 229
DL +P+D Q C +++ES+GYT+ D++ W E V+ + LPQF IL E + R
Sbjct: 165 DLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQF-ILKEEKDLRYCT 223
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGITT
Sbjct: 224 KHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITT 283
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
VLTMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 284 VLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 330
>gi|170044966|ref|XP_001850097.1| GABA receptor [Culex quinquefasciatus]
gi|167868041|gb|EDS31424.1| GABA receptor [Culex quinquefasciatus]
Length = 501
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 144/296 (48%), Positives = 201/296 (67%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + GYD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 15 NISAILDSFSVGYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 74
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 75 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 134
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +WK+ + V E +LPQF +
Sbjct: 135 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWKDGLSSVGMSSEVELPQFRV 194
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 195 LGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 254
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 255 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 310
>gi|5725306|emb|CAB52399.1| unnamed protein product [Mus musculus]
Length = 449
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 147/316 (46%), Positives = 208/316 (65%), Gaps = 12/316 (3%)
Query: 32 LCHKKSATTERLANVTQTISQLL-------HGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
L K A R A + S L GYD R+RPNF G P+ V ++ I SF SI
Sbjct: 20 LAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSI 79
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+E ++DY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++
Sbjct: 80 AETTIDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEI 139
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+
Sbjct: 140 TTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQ 199
Query: 204 ET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+P
Sbjct: 200 EQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIP 258
Query: 261 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 320
S+LIV+LSW+SFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C
Sbjct: 259 SLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Query: 321 FVFVFAALLEYAAVNY 336
+FVF+ALLEYAAVN+
Sbjct: 319 LLFVFSALLEYAAVNF 334
>gi|312191390|gb|ADQ43749.1| gamma-aminobutyric acid receptor subunit rho-3 [Xenopus laevis]
Length = 303
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/299 (47%), Positives = 205/299 (68%), Gaps = 5/299 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ I S DSISEV MD+T+T YL YWKD+RL+F S+ + +
Sbjct: 4 HDFAMRPGFGGSAIPVGIDVQIESIDSISEVDMDFTMTFYLRHYWKDERLSFQSTNNRSM 63
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG++ + +R T + C MD
Sbjct: 64 TFDGRLIKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNVLFSLRITVSAMCFMDFS 123
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHE-TNDRKEKL 232
+PLD QNC++E+ESY Y D+++YWK+ ++ E L QF I +N
Sbjct: 124 RFPLDTQNCSLELESYAYNEEDLMLYWKQGNESLKTDEHIALSQFFIEEFSASNGLAFYS 183
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
+TG Y RL ++F L+R+I +F+ Q+Y P++L+VMLSWVSFWI+ A ARV+LGITTVLT
Sbjct: 184 STGWYNRLFINFILRRHIFFFLLQSYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLT 243
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
M+TI TGV +S+P++SYVKA+ +YL + F+FVF +++EYAAVNY + +R + K + K
Sbjct: 244 MSTIITGVSASMPQVSYVKAVHVYLWISFLFVFLSVIEYAAVNYLTTVEERKQLKRRGK 302
>gi|110555508|gb|ABG75734.1| GABA-gated chloride channel [Apis mellifera]
Length = 445
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 11 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 70
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 71 RLAFKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 130
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 131 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKV 190
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 191 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 250
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 251 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 306
>gi|296231841|ref|XP_002761339.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3
[Callithrix jacchus]
Length = 467
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 150/319 (47%), Positives = 209/319 (65%), Gaps = 12/319 (3%)
Query: 48 QTISQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
Q QLLH D +RP FGG P+ VG+D+ + S DSISE +MD+T+T YL YWKD+R
Sbjct: 59 QKYEQLLHIEDNDFAMRPGFGGSPVPVGIDVHVESIDSISETNMDFTMTFYLRHYWKDER 118
Query: 106 LAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
L+F S+ ++ +T +KIWVPD FF + K SF+HD T N ++R++ DG+I +R
Sbjct: 119 LSFPSAVNKSMTFDHRLIQKIWVPDIFFVHSKRSFIHDTTMENIMLRVHPDGNILLSLRI 178
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG 222
T + C MD +PLD QNC++E+ESY Y D+++YWK + E L QF I
Sbjct: 179 TVSAMCFMDFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNKSLNTEEHISLSQFFI-- 236
Query: 223 HETNDRKEKLA----TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEA 278
E LA TG Y RL ++F L+R+I +FV QTY P+IL+VMLSWVSFWI+ A
Sbjct: 237 -EEFSASSGLAFYSSTGWYNRLFINFVLRRHIFFFVLQTYFPAILMVMLSWVSFWIDRRA 295
Query: 279 TSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSY 338
ARV+LGITTVLTM+TI T V +S+P++SY+KA+D+YL + +FVF +++EYAAVNY
Sbjct: 296 VPARVSLGITTVLTMSTIITAVGASMPQVSYLKAVDVYLWVSSLFVFLSVIEYAAVNYLT 355
Query: 339 WADRAKKKPKAKEPTPLGN 357
A+ K+ K + + + N
Sbjct: 356 TAEERKQFKKTGKISRMYN 374
>gi|395821320|ref|XP_003783992.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Otolemur
garnettii]
Length = 468
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 150/330 (45%), Positives = 215/330 (65%), Gaps = 17/330 (5%)
Query: 35 KKSATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVS 88
+K T R ++T+ QLLH +D +RP FGG P+ V +D+ + S DSISEV+
Sbjct: 45 RKQETRMRKDDITKVWPLKHEQLLHIEDHDFAMRPGFGGSPVPVAIDVQVESIDSISEVN 104
Query: 89 MDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERN 147
MD+T+T YL YWKD+RL+F S+ ++ +T +KIWVPD FF + K SF+HD T N
Sbjct: 105 MDFTMTFYLRHYWKDERLSFPSTTNKSMTFDHRLIQKIWVPDIFFVHSKRSFIHDTTMEN 164
Query: 148 KLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--T 205
++R+ DG+I + +R T + C MD +PLD QNC++E+ESY Y D+++YWK+
Sbjct: 165 IMLRVYPDGNILFSLRITVSAMCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKQGNK 224
Query: 206 PVRGVEEAQLPQFTILGHETNDRKEKLA----TGTYQRLSLSFKLQRNIGYFVFQTYLPS 261
+ E L QF + E A TG Y RL ++F L+R+I +FV QTY P+
Sbjct: 225 SLNTEEHISLSQFFV---EEFSASSGFAFYSSTGWYNRLFINFVLRRHIFFFVLQTYFPA 281
Query: 262 ILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCF 321
+L+VMLSWVSFWI+ A ARV+LGITTVLTM+TI+T V +S+P++SYVKA+D+YL +
Sbjct: 282 MLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTITTSVSASMPQVSYVKAVDVYLWVSS 341
Query: 322 VFVFAALLEYAAVNY-SYWADRAKKKPKAK 350
FVF +++EYAAVNY + +R + K + K
Sbjct: 342 TFVFLSVIEYAAVNYLTTVEERKRFKKRGK 371
>gi|328711150|ref|XP_001947125.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
isoform 1 [Acyrthosiphon pisum]
Length = 568
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 198/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 44 NISAILDSFSLSYDKRVRPNYGGTPIEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 103
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 104 RLAFTKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 163
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 164 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKV 223
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 224 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 283
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 284 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 339
>gi|167234243|ref|NP_001107809.1| GABA receptor isoform b precursor [Tribolium castaneum]
gi|156447605|gb|ABU63595.1| GABA-gated anion channel splice variant 3b6b [Tribolium castaneum]
gi|270016495|gb|EFA12941.1| resistant to dieldrin [Tribolium castaneum]
Length = 482
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 36 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 95
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 96 RLAFRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 155
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 156 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKV 215
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 216 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 275
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 276 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 331
>gi|432100008|gb|ELK28901.1| Gamma-aminobutyric acid receptor subunit pi [Myotis davidii]
Length = 456
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 151/320 (47%), Positives = 203/320 (63%), Gaps = 7/320 (2%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F
Sbjct: 59 NLTVGYNKFLRPNFGGEPVQIALTLDIASIYSISESNMDYTATIYLRQRWTDQRLVFEGN 118
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
V TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC
Sbjct: 119 KSV-TLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACN 177
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
MDL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T +
Sbjct: 178 MDLSKYPMDTQTCQLQLESWGYDSSDVRFSWLRGNDSVRGLENLRLAQYTIQRYFTLVTR 237
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TT
Sbjct: 238 SQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTT 297
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKK-- 346
VL+MTT+ G R+SLP + ++KAID++L +CF FVF ALLEYA +YS A K
Sbjct: 298 VLSMTTLMIGSRTSLPNTNCFIKAIDVFLGICFSFVFGALLEYAVAHYSSLQQMAAKDRG 357
Query: 347 -PKAKEPTPLGNYIRLCIFS 365
PK E + N I I S
Sbjct: 358 MPKEVEEVNITNIINSSISS 377
>gi|50746507|ref|XP_420527.1| PREDICTED: glycine receptor subunit alpha-3 [Gallus gallus]
Length = 463
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 143/288 (49%), Positives = 199/288 (69%), Gaps = 7/288 (2%)
Query: 54 LHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-ED 112
+ GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D
Sbjct: 70 MSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQNWNDPRLAYSEYPD 129
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C M
Sbjct: 130 DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPM 189
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--- 228
DL +P+D Q C +++ES+GYT+ D++ W+E V+ E LPQF L E D
Sbjct: 190 DLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVAEGLTLPQF--LLKEEKDLCYC 247
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 248 TKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 307
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 308 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 355
>gi|332225167|ref|XP_003261751.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Nomascus
leucogenys]
Length = 467
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 153/363 (42%), Positives = 225/363 (61%), Gaps = 14/363 (3%)
Query: 6 IIRIPDFNSENELESQIGNSDSEKLRLCHKKSATTERLANVT--QTISQLLH--GYDIRL 61
II IP+ + + ++ S + C +++ + + Q QLLH D +
Sbjct: 15 IILIPNVCAASNVKMTHQRCSSSMKQTCKQQTRMKKDDSTKVRPQKYEQLLHIEDNDFAI 74
Query: 62 RPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGD 120
RP FGG P+ VG+D+ + S DSISE +MD+T+T YL YWKD+RL+F S+ ++ +T
Sbjct: 75 RPGFGGSPVPVGIDVHVESIDSISETNMDFTMTFYLRHYWKDERLSFPSTANKSMTFDHR 134
Query: 121 FAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLD 180
KIWVPD FF + K SF+HD T N ++R++ DG++ +R T + C MD +PLD
Sbjct: 135 LTRKIWVPDIFFVHSKRSFIHDTTMENIMLRVHPDGNVLLSLRITVSAMCFMDFSRFPLD 194
Query: 181 NQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEKLA----T 234
QNC++E+ESY Y D+++YWK + E L QF I E LA T
Sbjct: 195 TQNCSLELESYAYNEDDLMLYWKHGNKSLNTEEHMSLSQFFI---EDFSASSGLAFYSST 251
Query: 235 GTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 294
G Y RL ++F L+R++ +FV QTY P+IL+VMLSWVSFWI+ A +ARV+LGITTVLTM+
Sbjct: 252 GWYNRLFINFVLRRHVFFFVLQTYFPAILMVMLSWVSFWIDRRAVAARVSLGITTVLTMS 311
Query: 295 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPTP 354
TI T V +S+P++SY+KA+D+YL + +FVF +++EYAAVNY + K+ K + +
Sbjct: 312 TIITAVSASMPQVSYLKAVDVYLWVSSLFVFLSVIEYAAVNYLTTVEERKQFKKTGKISR 371
Query: 355 LGN 357
+ N
Sbjct: 372 MYN 374
>gi|377550340|dbj|BAL63029.1| GABA-gated chloride channel subunit [Sogatella furcifera]
Length = 479
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 41 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 100
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 101 RLAFRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 160
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 161 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKV 220
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 221 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 280
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 281 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 336
>gi|405123|gb|AAA19249.1| GABA receptor [Drosophila melanogaster]
Length = 606
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 58 NISAILDSFSISYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 117
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 118 RLAYGKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 177
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 178 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 237
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 238 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATP 297
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 298 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 353
>gi|24661416|ref|NP_523991.2| resistant to dieldrin, isoform A [Drosophila melanogaster]
gi|442631234|ref|NP_001261616.1| resistant to dieldrin, isoform F [Drosophila melanogaster]
gi|7294983|gb|AAF50311.1| resistant to dieldrin, isoform A [Drosophila melanogaster]
gi|440215528|gb|AGB94311.1| resistant to dieldrin, isoform F [Drosophila melanogaster]
Length = 606
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 117
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 118 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 177
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 178 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 237
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 238 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 297
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 298 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 353
>gi|327261016|ref|XP_003215328.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like [Anolis
carolinensis]
Length = 526
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/311 (46%), Positives = 197/311 (63%), Gaps = 4/311 (1%)
Query: 29 KLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVS 88
K L HK AT R L GY+ LRPNFGG+P+ + M L +AS SISE
Sbjct: 110 KFILGHKVDATDYRATPSLPGFGNLTQGYNRYLRPNFGGEPVVIAMSLNVASISSISESD 169
Query: 89 MDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNK 148
MDYT T+YL Q W D RL F ++ TL + +WVPDT+ K SFLH+VT N+
Sbjct: 170 MDYTATIYLRQRWTDSRLVFQG-NKSFTLDARLVKYLWVPDTYIVESKKSFLHEVTAENR 228
Query: 149 LVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETP 206
L+RL +G++ Y +R TTT+AC MDL YPLD Q C +++ES+GY DV+ W
Sbjct: 229 LIRLFSNGTVLYALRITTTVACNMDLSKYPLDTQTCKLQMESWGYDENDVLFTWLRGNDS 288
Query: 207 VRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVM 266
V G+E +L Q+T+ + T TG Y RL L F+L+RNI YF+ +TY+PS L+V+
Sbjct: 289 VHGLENLRLSQYTVERYCTLSAMSHQETGNYPRLVLQFELKRNILYFILETYVPSTLLVI 348
Query: 267 LSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVF 325
LSWVSFWI ++ AR +G+TTVL+MTT+ G R+S+ + + ++KAIDIYL +CF F+F
Sbjct: 349 LSWVSFWITLDSVPARTCIGVTTVLSMTTLMMGSRNSITKTNGFIKAIDIYLGICFSFIF 408
Query: 326 AALLEYAAVNY 336
AL+EYA +Y
Sbjct: 409 GALVEYAVAHY 419
>gi|44887891|sp|Q9BLY8.1|GBRB_DROSI RecName: Full=Gamma-aminobutyric acid receptor subunit beta;
AltName: Full=GABA(A) receptor; AltName: Full=Protein
cyclodiene resistance; Flags: Precursor
gi|12699096|gb|AAK00512.1| GABA receptor [Drosophila simulans]
Length = 606
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 117
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 118 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 177
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 178 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 237
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 238 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATP 297
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 298 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 353
>gi|284795247|ref|NP_001165353.1| glycine receptor precursor [Ciona intestinalis]
gi|283945411|dbj|BAI66458.1| glycine receptor [Ciona intestinalis]
Length = 491
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/338 (45%), Positives = 219/338 (64%), Gaps = 9/338 (2%)
Query: 2 SELQIIRIPDF-NSENELESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIR 60
+EL I R D+ N E+ Q + S + H +S T E+ A T + L +GYD R
Sbjct: 43 AELPIDREYDYDNYYGEIPKQRKKTVSTQ---THTES-TEEKKA--TYFLDNLFNGYDQR 96
Query: 61 LRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDE-VLTLSG 119
+RP+ P+ V +++ + SF SI+E +MDY + ++L W D R+AF+ DE + L
Sbjct: 97 IRPHHKRSPVNVTVNIFVNSFGSIAETTMDYRVNIFLRCRWNDQRMAFTGFDEDAVALHP 156
Query: 120 DFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPL 179
E IW PD FFAN+K++ H+VT NKL+R+ +G + +R + TLAC M L +P+
Sbjct: 157 SMLENIWRPDLFFANEKHANFHEVTTENKLLRIYKNGDVYSSVRLSLTLACAMHLQNFPM 216
Query: 180 DNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDRKEKLATGTYQ 238
D Q C +++ES+GY + D+ W+E PV+ LPQF ILG++ + TG++
Sbjct: 217 DIQTCKMQLESFGYDMRDLAFQWQEDLPVQLPPSLTLPQFRILGYKLGSCTKVYNTGSFT 276
Query: 239 RLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTIST 298
+ +SF L+R +GY+V QTY+PS LIV+LSWVSFWIN EA AR ALGITTVLTMTT S+
Sbjct: 277 CIEVSFILERQMGYYVIQTYVPSALIVILSWVSFWINMEAAPARTALGITTVLTMTTQSS 336
Query: 299 GVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
G R+SLP++SYVKAID ++ +C +FVFAALLE+A VN+
Sbjct: 337 GARASLPKVSYVKAIDTWMAVCLLFVFAALLEFAVVNF 374
>gi|355344078|gb|AER59668.1| gamma-aminobutyric receptor alpha 2 subunit [Spodoptera litura]
Length = 499
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 196/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + L YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 42 NISAILDSLSVSYDKRVRPNYGGPPVDVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 101
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F IWVPD FF N+K S+ H T N+ +R++ GSIT +
Sbjct: 102 RLAYKKRTGVETLSVGSEFIRNIWVPDAFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 161
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C MDL Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 162 RLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 221
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 222 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 281
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 282 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 337
>gi|449500541|ref|XP_002188642.2| PREDICTED: glycine receptor subunit alpha-3 [Taeniopygia guttata]
Length = 434
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/288 (49%), Positives = 199/288 (69%), Gaps = 7/288 (2%)
Query: 54 LHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-ED 112
+ GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D
Sbjct: 33 MSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQNWNDPRLAYSEYPD 92
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C M
Sbjct: 93 DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPM 152
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--- 228
DL +P+D Q C +++ES+GYT+ D++ W+E V+ E LPQF L E D
Sbjct: 153 DLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVAEGLTLPQF--LLKEEKDLCYC 210
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 211 TKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 270
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 271 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 318
>gi|348537425|ref|XP_003456195.1| PREDICTED: glycine receptor subunit alpha-3-like [Oreochromis
niloticus]
Length = 455
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 146/307 (47%), Positives = 207/307 (67%), Gaps = 15/307 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+ D+
Sbjct: 26 GYDARIRPNFKGSPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYKEYPDDS 85
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 86 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLTLSCPMDL 145
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D+Q CT+++ES+GYT+ D++ W + V+ ++ LPQF + LG+ T
Sbjct: 146 KNFPMDSQTCTMQLESFGYTMNDLIFEWLDVGAVQVADDLMLPQFVLKEEKGLGYCT--- 202
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+L V+LSWVSFWIN +A ARV LGIT
Sbjct: 203 -KHYNTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGIT 261
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD----RAK 344
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+ R K
Sbjct: 262 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFFRMK 321
Query: 345 KKPKAKE 351
KK K ++
Sbjct: 322 KKLKEQQ 328
>gi|397739455|gb|AFO62384.1| GABA-gated chloride channel, partial [Laodelphax striatella]
Length = 401
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/307 (47%), Positives = 200/307 (65%), Gaps = 5/307 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 6 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVQMDFTLDFYFRQFWTDP 65
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 66 RLAFRKRPGVETLSVGSEFTKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 125
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 126 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKV 185
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 186 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 245
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYW 339
ARV LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y + W
Sbjct: 246 ARVNLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKW 305
Query: 340 ADRAKKK 346
K +
Sbjct: 306 IQMRKNR 312
>gi|326918628|ref|XP_003205590.1| PREDICTED: glycine receptor subunit alpha-3-like [Meleagris
gallopavo]
Length = 486
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/288 (49%), Positives = 199/288 (69%), Gaps = 7/288 (2%)
Query: 54 LHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-ED 112
+ GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D
Sbjct: 93 MSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQNWNDPRLAYSEYPD 152
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C M
Sbjct: 153 DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPM 212
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--- 228
DL +P+D Q C +++ES+GYT+ D++ W+E V+ E LPQF L E D
Sbjct: 213 DLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVAEGLTLPQF--LLKEEKDLCYC 270
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 271 TKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 330
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 331 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 378
>gi|15291147|gb|AAK92842.1| GH09619p [Drosophila melanogaster]
Length = 454
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 200/296 (67%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 117
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 118 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 177
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +W++ + V E +LPQF +
Sbjct: 178 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRV 237
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 238 LGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATP 297
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 298 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 353
>gi|153792493|ref|NP_001093294.1| GABA-gated chlorine channel alpha subunit precursor [Bombyx mori]
gi|145843755|gb|ABP96889.1| GABA-gated chlorine channel alpha subunit [Bombyx mori]
Length = 482
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 198/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 39 NISAILDSFSISYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 98
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 99 RLAYKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHYSGSITRSI 158
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T++C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 159 RLTITVSCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 218
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 219 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 278
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 279 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 334
>gi|328711148|ref|XP_003244457.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
isoform 2 [Acyrthosiphon pisum]
Length = 568
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 198/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 44 NISAILDSFSLSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 103
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 104 RLAFTKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 163
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 164 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKV 223
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 224 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 283
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 284 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 339
>gi|442631236|ref|NP_001261617.1| resistant to dieldrin, isoform G [Drosophila melanogaster]
gi|440215529|gb|AGB94312.1| resistant to dieldrin, isoform G [Drosophila melanogaster]
Length = 608
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 200/296 (67%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 117
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 118 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 177
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +W++ + V E +LPQF +
Sbjct: 178 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRV 237
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 238 LGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 297
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 298 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 353
>gi|442631232|ref|NP_001261615.1| resistant to dieldrin, isoform E [Drosophila melanogaster]
gi|440215527|gb|AGB94310.1| resistant to dieldrin, isoform E [Drosophila melanogaster]
Length = 606
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 117
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 118 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 177
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 178 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 237
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 238 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 297
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 298 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 353
>gi|386770879|ref|NP_729462.2| resistant to dieldrin, isoform D [Drosophila melanogaster]
gi|383291841|gb|AAN11989.2| resistant to dieldrin, isoform D [Drosophila melanogaster]
Length = 579
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 200/296 (67%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 117
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 118 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 177
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +W++ + V E +LPQF +
Sbjct: 178 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRV 237
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 238 LGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 297
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 298 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 353
>gi|124487131|ref|NP_001074659.1| gamma-aminobutyric acid receptor subunit rho-3 precursor [Mus
musculus]
gi|148665807|gb|EDK98223.1| mCG129069 [Mus musculus]
gi|187956351|gb|AAI51106.1| Gamma-aminobutyric acid (GABA) receptor, rho 3 [Mus musculus]
Length = 464
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/294 (48%), Positives = 201/294 (68%), Gaps = 12/294 (4%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF- 108
QLLH +D RP FGG P+ VG+D+ + S DSISEV+MD+T+T YL YWKD+RL+F
Sbjct: 60 QLLHIEDHDFSTRPGFGGSPVPVGIDVQVESIDSISEVNMDFTMTFYLRHYWKDERLSFP 119
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S+ ++ +T +KIWVPD FF + K SF+HD T N ++R++ DG++ + +R T +
Sbjct: 120 STTNKSMTFDRRLLQKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGNVLFSLRITVSA 179
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
C MD +PLD QNC++E+ESY Y D+++YWK + E L QF I E
Sbjct: 180 MCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKHGNKSLNTEERISLSQFFI---EEF 236
Query: 227 DRKEKLA----TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
LA TG Y RL ++F L+R++ +FV QTY P++L+VMLSWVSFWI+ A AR
Sbjct: 237 SASSGLAFYSSTGWYYRLFINFVLRRHVFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPAR 296
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
V+LGITTVLTM+T+ TGV +S+P++SYVKA+D+Y+ + +FVF +++EYA VNY
Sbjct: 297 VSLGITTVLTMSTVVTGVSASMPQVSYVKAVDVYMWVSSLFVFLSVIEYATVNY 350
>gi|387538826|gb|AFJ79638.1| GABA-gated chloride channel subunit, partial [Laodelphax
striatella]
Length = 401
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 196/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 6 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVQMDFTLDFYFRQFWTDP 65
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 66 RLAFRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 125
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 126 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKV 185
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 186 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 245
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 246 ARVNLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 301
>gi|354494412|ref|XP_003509331.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta-like
[Cricetulus griseus]
gi|344244238|gb|EGW00342.1| Gamma-aminobutyric acid receptor subunit delta [Cricetulus griseus]
Length = 425
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/288 (49%), Positives = 201/288 (69%), Gaps = 3/288 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 23 LMEGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 82
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 83 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 142
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +++ESYGY+ D+V YW E + G++ QL QFTI + T +
Sbjct: 143 DLAKYPMDEQECMLDLESYGYSSEDIVYYWSENQEQIHGLDRLQLAQFTITSYRFTTELM 202
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F+L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 203 NSKSAGQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 262
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 263 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 310
>gi|74919269|sp|Q75NA5.2|GBRB_MUSDO RecName: Full=Gamma-aminobutyric acid receptor subunit beta;
AltName: Full=GABA(A) receptor subunit beta; AltName:
Full=MdRdl; Flags: Precursor
gi|49205114|dbj|BAD16658.2| GABA-gated chloride channel subunit [Musca domestica]
Length = 576
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 56 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 115
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 116 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 175
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 176 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 235
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 236 LGHRQRAVEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATP 295
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 296 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 351
>gi|402852664|ref|XP_003891036.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta [Papio
anubis]
Length = 454
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/288 (49%), Positives = 202/288 (70%), Gaps = 3/288 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 47 LIAGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 106
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 107 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 166
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +E+ESYGY+ D+V YW E+ + G+++ QL QFTI + T +
Sbjct: 167 DLAKYPMDEQECMLELESYGYSSEDIVYYWSESQEHIHGLDKLQLAQFTITSYRFTTELM 226
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 227 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 286
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 287 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 334
>gi|5762320|gb|AAD51101.1|AF172352_1 GABA receptor subunit [Ceratitis capitata]
Length = 541
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 40 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 99
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 100 RLAYGKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 159
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 160 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 219
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 220 LGHRQXAVEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATP 279
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 280 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 335
>gi|260821583|ref|XP_002606112.1| hypothetical protein BRAFLDRAFT_88022 [Branchiostoma floridae]
gi|229291450|gb|EEN62122.1| hypothetical protein BRAFLDRAFT_88022 [Branchiostoma floridae]
Length = 446
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/308 (44%), Positives = 203/308 (65%), Gaps = 4/308 (1%)
Query: 33 CHKKSATTERLANVTQTISQLLHG----YDIRLRPNFGGDPLYVGMDLTIASFDSISEVS 88
C +K+ + T S LL YD R+RPNF G+P+ V ++ + S SI E +
Sbjct: 25 CEEKNCAVDISKRKQDTPSDLLDSMLCDYDHRIRPNFEGEPVIVTCEMFVKSIGSIEERT 84
Query: 89 MDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNK 148
MDY++ ++L Q W D RLAF+ + + + +++W PD FF N+K++ H VT NK
Sbjct: 85 MDYSVNIFLRQKWNDPRLAFTKYNHTIAVDVSLLKQLWQPDLFFVNEKSAKFHSVTVDNK 144
Query: 149 LVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR 208
+R++ +G I Y R T LAC M+L +PLD Q C +++ESYG+T ++++ WKE
Sbjct: 145 FLRISPNGDILYSSRLTLQLACEMNLEKFPLDYQRCDIQMESYGFTTENLILQWKEDNPV 204
Query: 209 GVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLS 268
+ ++L +F I+G +T D + TGTY +++ F LQR IGY++ Q Y+PSILIV++S
Sbjct: 205 QLGNSELSKFNIIGVDTIDCPQNYTTGTYTCIAVQFHLQRKIGYYLIQLYIPSILIVIIS 264
Query: 269 WVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAAL 328
W+SFWI E+ AR ALGITTVLTMTT ST R+S+P +SY+++IDI++ +C +FVFAAL
Sbjct: 265 WISFWITMESAPARTALGITTVLTMTTQSTSSRASMPEVSYIRSIDIWMAVCQMFVFAAL 324
Query: 329 LEYAAVNY 336
LE+AAVN+
Sbjct: 325 LEFAAVNF 332
>gi|387542806|gb|AFJ72030.1| gamma-aminobutyric acid receptor subunit delta precursor [Macaca
mulatta]
Length = 454
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/288 (49%), Positives = 202/288 (70%), Gaps = 3/288 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 47 LIAGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 106
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 107 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 166
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +E+ESYGY+ D+V YW E+ + G+++ QL QFTI + T +
Sbjct: 167 DLAKYPMDEQECMLELESYGYSSEDIVYYWSESQEHIHGLDKLQLAQFTITSYRFTTELM 226
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 227 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 286
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 287 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 334
>gi|160707923|ref|NP_032098.2| gamma-aminobutyric acid receptor subunit delta precursor [Mus
musculus]
gi|120792|sp|P22933.1|GBRD_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit delta;
AltName: Full=GABA(A) receptor subunit delta; Flags:
Precursor
gi|193402|gb|AAA37652.1| GABA-alpha receptor delta-subunit [Mus musculus]
gi|109733707|gb|AAI16833.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit delta [Mus
musculus]
gi|109734118|gb|AAI16837.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit delta [Mus
musculus]
gi|148683055|gb|EDL15002.1| gamma-aminobutyric acid (GABA-A) receptor, subunit delta, isoform
CRA_b [Mus musculus]
Length = 449
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/288 (49%), Positives = 201/288 (69%), Gaps = 3/288 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 47 LMEGYARNFRPGIGGAPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 106
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 107 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 166
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-TNDRK 229
DL YPLD Q C +++ESYGY+ D+V YW E + G++ QL QFTI + T +
Sbjct: 167 DLAKYPLDEQECMLDLESYGYSSEDIVYYWSENQEQIHGLDRLQLAQFTITSYRFTTELM 226
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F+L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 227 NFKSAGQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 286
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 287 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 334
>gi|315666576|gb|ADU55585.1| GABA receptor [Anopheles funestus]
Length = 368
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/296 (48%), Positives = 198/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + GYD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 53 NISAILDSFSVGYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVRMDFTLDFYFRQFWTDP 112
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T ++ +R++ GSIT +
Sbjct: 113 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSSEFIRIHHSGSITRSI 172
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 173 RLTITASCPMGLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 232
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N +AT
Sbjct: 233 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRDATP 292
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 293 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 348
>gi|344282993|ref|XP_003413257.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta
[Loxodonta africana]
Length = 726
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/288 (50%), Positives = 200/288 (69%), Gaps = 3/288 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISEV+M+YT+T++L+Q W+D RL++S +
Sbjct: 47 LVEGYARNFRPGIGGPPVNVALALEVASIDHISEVNMEYTMTIFLHQSWRDSRLSYSHTN 106
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +++W+PDTF N K+++ HDVT NKL+RL DG I Y R T+T+AC M
Sbjct: 107 ETLGLDSRFVDRLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSTRITSTVACDM 166
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +++ESYGY+ D+V YW E + G+++ QL QFTI T +
Sbjct: 167 DLAKYPMDEQECMLDLESYGYSSEDIVYYWSENQEQIHGLDKLQLAQFTITSFRFTTELM 226
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV+LGITT
Sbjct: 227 NFKSAGQFPRLSLRFHLRRNRGVYIIQSYMPSILLVAMSWVSFWISQAAVPARVSLGITT 286
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 287 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 334
>gi|328908383|gb|AEB60992.1| GABA receptor [Anopheles funestus]
Length = 557
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/296 (48%), Positives = 198/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + GYD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 53 NISAILDSFSVGYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVRMDFTLDFYFRQFWTDP 112
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T ++ +R++ GSIT +
Sbjct: 113 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSSEFIRIHHSGSITRSI 172
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 173 RLTITASCPMGLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 232
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N +AT
Sbjct: 233 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRDATP 292
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 293 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 348
>gi|297284832|ref|XP_001087158.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Macaca
mulatta]
Length = 467
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/348 (43%), Positives = 215/348 (61%), Gaps = 27/348 (7%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLH--GYDIRLRPNFGGDPLYVGMDL 76
E+++ DS K+R Q QLLH D +RP FGG P+ VG+D+
Sbjct: 45 ETRMKKDDSTKVR---------------PQKYEQLLHIEDNDFAMRPGFGGSPVPVGIDV 89
Query: 77 TIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFAND 135
+ S DSISE +MD+T+T YL YWKD+RL+F S+ ++ +T KIWVPD FF +
Sbjct: 90 HVESIDSISETNMDFTMTFYLRHYWKDERLSFPSTANKSMTFDHRLIRKIWVPDIFFVHS 149
Query: 136 KNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTV 195
K SF+HD T N ++R++ DG++ +R T + C MD +PLD QNC++E+ESY Y
Sbjct: 150 KRSFIHDTTMENIMLRVHPDGNVLLSLRITVSAMCFMDFSRFPLDTQNCSLELESYAYNE 209
Query: 196 LDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEKLA----TGTYQRLSLSFKLQRN 249
D+++YWK + E L QF I E LA TG Y RL ++F L+R+
Sbjct: 210 DDLMLYWKHGNKSLNTEEHMSLSQFFI---EDFSASSGLAFYSSTGWYNRLFINFVLRRH 266
Query: 250 IGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISY 309
I +FV QTY P+IL+VMLSWVSFWI+ A ARV+LGITTVLTM+TI T V +S+P++SY
Sbjct: 267 IFFFVLQTYFPAILMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITAVSASMPQVSY 326
Query: 310 VKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPTPLGN 357
+KA+D+YL + FVF +++EYAAVNY + K+ K + + + N
Sbjct: 327 LKAVDVYLWVSSFFVFLSVIEYAAVNYLTTVEERKQFKKTGKISRMYN 374
>gi|146771445|gb|ABQ45398.1| GABA-gated chloride channel a2 subunit [Spodoptera exigua]
Length = 499
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 195/296 (65%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + L YD R+RPN+GG P+ VG + + S S+SEV MD+T+ Y Q+W D
Sbjct: 42 NISAILDSLSVSYDKRVRPNYGGPPVDVGATMHVLSISSLSEVKMDFTLDFYFRQFWTDP 101
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 102 RLAYKKRTGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 161
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C MD Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 162 RLTITASCPMDPQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPNSVGVPSEVSLPQFKV 221
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 222 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 281
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 282 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 337
>gi|157743288|ref|NP_001099050.1| gamma-aminobutyric acid receptor subunit rho-3 precursor [Homo
sapiens]
gi|187471177|sp|A8MPY1.2|GBRR3_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit rho-3;
AltName: Full=GABA(A) receptor subunit rho-3; AltName:
Full=GABA(C) receptor; Flags: Precursor
Length = 467
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/319 (46%), Positives = 207/319 (64%), Gaps = 12/319 (3%)
Query: 48 QTISQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
Q QLLH D +RP FGG P+ VG+D+ + S DSISE +MD+T+T YL YWKD+R
Sbjct: 59 QKYEQLLHIEDNDFAMRPGFGGSPVPVGIDVHVESIDSISETNMDFTMTFYLRHYWKDER 118
Query: 106 LAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
L+F S+ ++ +T KIWVPD FF + K SF+HD T N ++R++ DG++ +R
Sbjct: 119 LSFPSTANKSMTFDHRLTRKIWVPDIFFVHSKRSFIHDTTMENIMLRVHPDGNVLLSLRI 178
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG 222
T + C MD +PLD QNC++E+ESY Y D+++YWK + E L QF I
Sbjct: 179 TVSAMCFMDFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNKSLNTEEHMSLSQFFI-- 236
Query: 223 HETNDRKEKLA----TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEA 278
E LA TG Y RL ++F L+R++ +FV QTY P+IL+VMLSWVSFWI+ A
Sbjct: 237 -EDFSASSGLAFYSSTGWYNRLFINFVLRRHVFFFVLQTYFPAILMVMLSWVSFWIDRRA 295
Query: 279 TSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSY 338
ARV+LGITTVLTM+TI T V +S+P++SY+KA+D+YL + +FVF +++EYAAVNY
Sbjct: 296 VPARVSLGITTVLTMSTIITAVSASMPQVSYLKAVDVYLWVSSLFVFLSVIEYAAVNYLT 355
Query: 339 WADRAKKKPKAKEPTPLGN 357
+ K+ K + + + N
Sbjct: 356 TVEERKQFKKTGKISRMYN 374
>gi|301778022|ref|XP_002924426.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit delta-like [Ailuropoda melanoleuca]
Length = 428
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/288 (49%), Positives = 200/288 (69%), Gaps = 3/288 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + + +AS D ISEV+M+YT+T++L+Q W+D RLA++ +
Sbjct: 23 LMEGYARNFRPGIGGPPVNVALAIEVASIDHISEVNMEYTMTVFLHQSWRDSRLAYNHTN 82
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 83 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 142
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C + +ESYGY+ D+V YW E + G+ + QL QFTI + + +
Sbjct: 143 DLAKYPMDEQECMLHLESYGYSSEDIVYYWSENQEQIHGLNKLQLAQFTITSYRFATELR 202
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV+LGITT
Sbjct: 203 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYVPSILLVAMSWVSFWISQAAVPARVSLGITT 262
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 263 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 310
>gi|345800631|ref|XP_546729.3| PREDICTED: gamma-aminobutyric acid receptor subunit delta isoform 1
[Canis lupus familiaris]
Length = 456
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/288 (50%), Positives = 199/288 (69%), Gaps = 3/288 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + + +AS D ISEV+M+YT+T++L+Q W+D RLA++ +
Sbjct: 47 LMDGYARNFRPGIGGPPVNVALAIEVASIDHISEVNMEYTMTVFLHQSWRDSRLAYNHTN 106
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 107 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 166
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILG-HETNDRK 229
DL YP+D Q C + +ESYGY+ D+V YW E + G+ + QL QFTI H +
Sbjct: 167 DLAKYPMDEQECMLHLESYGYSSEDIVYYWSENQEQIHGLNKLQLAQFTITSYHFATELM 226
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV+LGITT
Sbjct: 227 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSILLVAMSWVSFWISQAAVPARVSLGITT 286
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 287 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 334
>gi|306448459|gb|ADM88012.1| ionotropic GABA-aminobutyric acid receptor BRL3-3b6a [Bombyx mori]
Length = 489
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/296 (48%), Positives = 198/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 37 NISAILDSFSISYDKRVRPNYGGPPVEVGITMYVLSISSLSEVHMDFTLDFYFRQFWTDP 96
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 97 RLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 156
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+V WK+ + V E QLPQF +
Sbjct: 157 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIVYVWKDGASSVGMSSEVQLPQFRV 216
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH L+TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 217 LGHRQRATVVTLSTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 276
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VF +LLEYA V Y
Sbjct: 277 ARVQLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFTSLLEYATVGY 332
>gi|306448447|gb|ADM88006.1| ionotropic GABA-aminobutyric acid receptor RLD1-3b6b [Bombyx mori]
Length = 482
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 39 NISAILDSFSISYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 98
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 99 RLAYKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHYSGSITRSI 158
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 159 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 218
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 219 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 278
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 279 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 334
>gi|410899000|ref|XP_003962985.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta-like
[Takifugu rubripes]
Length = 461
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/305 (48%), Positives = 209/305 (68%), Gaps = 6/305 (1%)
Query: 50 ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
+ +L+ GY RP GG P+ V M + +AS D ISE +M+YT+T++L Q W DDRL+++
Sbjct: 45 LDELMKGYARNFRPGIGGPPVNVAMAIEVASIDHISEANMEYTMTVFLRQSWHDDRLSYN 104
Query: 110 SEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLA 169
++ L L F +K+W+PDTF N K+++ HDVT NKL+RL +G I Y R T+T+A
Sbjct: 105 HTNKTLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPNGVILYSSRITSTVA 164
Query: 170 CMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHETND 227
C MDL YP+D Q C +++ESYGY+ D+V +W E+ + G+++ +L QFTI + +
Sbjct: 165 CDMDLTKYPMDEQECRLDLESYGYSSEDIVYHWSESQQHIHGLDKLELSQFTITDYRFDT 224
Query: 228 RKEKL-ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+ G + RLSL F+L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV LG
Sbjct: 225 EIMNFKSAGRFPRLSLCFQLRRNRGVYIIQSYMPSILLVAMSWVSFWISQSAVPARVTLG 284
Query: 287 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-RAKK 345
ITTVLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +Y+ AD R K+
Sbjct: 285 ITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALIEYAFAHYN--ADYRLKE 342
Query: 346 KPKAK 350
K K K
Sbjct: 343 KAKVK 347
>gi|348570472|ref|XP_003471021.1| PREDICTED: glycine receptor subunit alpha-4 [Cavia porcellus]
Length = 457
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYQEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF + LG+ T +
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTKN 236
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 237 YN----TGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 292
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 341
>gi|327268587|ref|XP_003219078.1| PREDICTED: glycine receptor subunit alpha-3-like [Anolis
carolinensis]
Length = 462
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/288 (49%), Positives = 199/288 (69%), Gaps = 7/288 (2%)
Query: 54 LHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-ED 112
+ GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D
Sbjct: 65 MSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQNWNDPRLAYSEYPD 124
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C M
Sbjct: 125 DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPM 184
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--- 228
DL +P+D Q C +++ES+GYT+ D++ W+E V+ + LPQF L E D
Sbjct: 185 DLKNFPMDVQTCIMQLESFGYTMNDLIFEWQENGAVQVADGLTLPQF--LLKEDKDLVYC 242
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGIT
Sbjct: 243 TKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGIT 302
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 303 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 350
>gi|306448451|gb|ADM88008.1| ionotropic GABA-aminobutyric acid receptor RDL1-3b6a [Bombyx mori]
Length = 482
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 199/296 (67%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 39 NISAILDSFSISYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 98
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 99 RLAYKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHYSGSITRSI 158
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +WK+ + V E QLPQF +
Sbjct: 159 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYHWKDGHSSVGMSNEVQLPQFRV 218
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 219 LGHRQRATVITLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 278
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 279 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 334
>gi|426341341|ref|XP_004035998.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Gorilla
gorilla gorilla]
Length = 467
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 147/319 (46%), Positives = 207/319 (64%), Gaps = 12/319 (3%)
Query: 48 QTISQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
Q QLLH D +RP FGG P+ VG+D+ + S DSISE +MD+T+T YL YWKD+R
Sbjct: 59 QKYEQLLHIEDNDFTMRPGFGGSPVPVGIDVHVESIDSISETNMDFTMTFYLRHYWKDER 118
Query: 106 LAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
L+F S+ ++ +T KIWVPD FF + K SF+HD T N ++R++ DG++ +R
Sbjct: 119 LSFPSTANKSMTFDHRLTRKIWVPDIFFVHSKRSFIHDTTMENIMLRVHPDGNVLLSLRI 178
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG 222
T + C MD +PLD QNC++E+ESY Y D+++YWK + E L QF I
Sbjct: 179 TVSAMCFMDFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNKSLNTEEHMSLSQFFI-- 236
Query: 223 HETNDRKEKLA----TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEA 278
E LA TG Y RL ++F L+R++ +FV QTY P+IL+VMLSWVSFWI+ A
Sbjct: 237 -EDFSASSGLAFYSSTGWYNRLFINFVLRRHVFFFVLQTYFPAILMVMLSWVSFWIDRRA 295
Query: 279 TSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSY 338
ARV+LGITTVLTM+TI T V +S+P++SY+KA+D+YL + +FVF +++EYAAVNY
Sbjct: 296 VPARVSLGITTVLTMSTIITAVSASMPQVSYLKAVDVYLWVSSLFVFLSVIEYAAVNYLT 355
Query: 339 WADRAKKKPKAKEPTPLGN 357
+ K+ K + + + N
Sbjct: 356 TVEERKQFKKTGKISRMYN 374
>gi|307611927|ref|NP_001182629.1| ionotropic GABA-aminobutyric acid receptor RDL2 precursor [Bombyx
mori]
gi|306448453|gb|ADM88009.1| ionotropic GABA-aminobutyric acid receptor RDL2 [Bombyx mori]
Length = 495
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 195/296 (65%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + L YD R+RPN+GG P+ VG+ + S S+SEV MDYT+ Y Q+W D
Sbjct: 42 NISAILDSLSVSYDKRVRPNYGGPPVDVGVTTYVLSISSLSEVKMDYTLDFYFRQFWTDP 101
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 102 RLAYKKRTGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 161
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C MDL Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 162 RLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 221
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+ AT
Sbjct: 222 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLYRNATP 281
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 282 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 337
>gi|24661412|ref|NP_729461.1| resistant to dieldrin, isoform C [Drosophila melanogaster]
gi|109933036|sp|P25123.3|GBRB_DROME RecName: Full=Gamma-aminobutyric acid receptor subunit beta;
AltName: Full=GABA(A) receptor subunit beta; AltName:
Full=Protein cyclodiene resistance; Flags: Precursor
gi|23093867|gb|AAN11988.1| resistant to dieldrin, isoform C [Drosophila melanogaster]
Length = 606
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 200/296 (67%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 117
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 118 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 177
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +W++ + V E +LPQF +
Sbjct: 178 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRV 237
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 238 LGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 297
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 298 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 353
>gi|157474|gb|AAA28558.1| GABA-alpha receptor [Drosophila melanogaster]
Length = 595
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 200/296 (67%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 47 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 106
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 107 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 166
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +W++ + V E +LPQF +
Sbjct: 167 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRV 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 227 LGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 287 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 342
>gi|17225419|gb|AAL37392.1|AF326546_1 gamma-aminobutyric acid receptor, subunit delta [Mus musculus]
gi|17225455|gb|AAL37410.1|AF326564_1 gamma-aminobutyric acid receptor, subunit delta [Mus musculus]
Length = 449
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/288 (49%), Positives = 201/288 (69%), Gaps = 3/288 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 47 LMEGYARNFRPGIGGAPVNVALVLEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 106
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 107 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 166
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-TNDRK 229
DL YPLD Q C +++ESYGY+ D+V YW E + G++ QL QFTI + T +
Sbjct: 167 DLAKYPLDEQECMLDLESYGYSSEDIVYYWSENQEQIHGLDRLQLAQFTITSYRFTTELM 226
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F+L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 227 NFKSAGQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 286
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 287 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 334
>gi|157472|gb|AAA28556.1| GABA-alpha receptor [Drosophila melanogaster]
Length = 606
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 200/296 (67%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 117
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 118 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 177
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +W++ + V E +LPQF +
Sbjct: 178 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRV 237
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 238 LGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATP 297
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 298 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 353
>gi|165935826|gb|ABY75185.1| GABA-gated chloride channel receptor [Haemonchus contortus]
Length = 456
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 150/332 (45%), Positives = 216/332 (65%), Gaps = 10/332 (3%)
Query: 8 RIPDFNSENELESQIGNSDSEKLRLCHKKSATTERLAN-VTQTISQLLHGYDIRLRPNFG 66
R P S+ E+E ++S++ R E+L N V++ + +L+ +D R+RPN+G
Sbjct: 22 RPPVMRSDKEIEYGYTETESDETR-------PNEKLENNVSRLLDKLIASHDRRIRPNYG 74
Query: 67 GDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE-DEVLTLSGDFAEKI 125
G P+ V + I + +I+EVSMDYT+ +YL Q WKD RLA+ S+ LT+ D + I
Sbjct: 75 GPPIEVNITAHITTISAITEVSMDYTLDLYLRQIWKDPRLAWESDVQSSLTIGIDMVKTI 134
Query: 126 WVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCT 185
W PDTFF N+K SF H+ T N +R++ G++ +R T T C M+LH +PLD Q C
Sbjct: 135 WTPDTFFPNEKKSFFHEATSHNSFLRIDSHGNVLRSIRLTVTANCPMNLHTFPLDIQECA 194
Query: 186 VEIESYGYTVLDVVMYWKETPVRGVEE-AQLPQFTILGHETNDRKEKLATGTYQRLSLSF 244
+EIESYGY+ D++ +W + ++E L F+I H +R L+TG Y RLS F
Sbjct: 195 LEIESYGYSTRDIIYHWHDANAVTIDENVHLAHFSIGDHYHIERTISLSTGNYSRLSAYF 254
Query: 245 KLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSL 304
+RN+G+++ Q Y PS LIV++SWVSFW+N EA ARVA+G+TTVLTMTT+ T +SL
Sbjct: 255 TFKRNLGFYLIQIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMTTLMTSTNASL 314
Query: 305 PRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
P++SYVK++DI+L MCF VFA+LLEYAA+ Y
Sbjct: 315 PKVSYVKSLDIFLGMCFFIVFASLLEYAAIGY 346
>gi|157473|gb|AAA28557.1| GABA-alpha receptor [Drosophila melanogaster]
Length = 601
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 200/296 (67%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 53 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 112
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 113 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 172
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +W++ + V E +LPQF +
Sbjct: 173 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRV 232
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 233 LGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATP 292
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 293 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 348
>gi|306448463|gb|ADM88014.1| ionotropic GABA-aminobutyric acid receptor RLD1-3a6 [Bombyx mori]
Length = 482
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 39 NISAILDSFSISYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 98
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 99 RLAYKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHYSGSITRSI 158
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 159 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 218
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 219 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 278
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 279 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 334
>gi|291235943|ref|XP_002737898.1| PREDICTED: glycine receptor alpha 4 subunit-like protein-like
[Saccoglossus kowalevskii]
Length = 464
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/288 (47%), Positives = 197/288 (68%), Gaps = 2/288 (0%)
Query: 50 ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
I L+ YD R+RPN G+P+ V +D+ I SFDSI E +MDY +TMY Q+W D RLAF+
Sbjct: 38 IDSLMDKYDRRIRPNSKGNPVKVYVDMFITSFDSIRETTMDYAVTMYFRQHWNDTRLAFN 97
Query: 110 SEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLA 169
+ E + ++ + E+ WVPD FF N K + H VT N R++ G I Y +R + TL+
Sbjct: 98 -DTETIVVTDNVRERFWVPDLFFVNVKRANFHYVTRDNVFFRVHPTGLILYSVRLSLTLS 156
Query: 170 CMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR 228
C M L +P+D Q C ++IE YGYT D+ +YW+++ V E ++ Q+ + G + ++R
Sbjct: 157 CHMTLEDFPMDRQFCGIQIEPYGYTTKDIELYWQDSNAVAWDPELKMAQYVLEGSDLSER 216
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ +TG + +++ F L R +G++V QTY+PSIL+V+LSWVSFWI+ A ARVALGIT
Sbjct: 217 IQDYSTGFFGHVNVVFVLTRQLGFYVLQTYIPSILLVVLSWVSFWIDVTAAPARVALGIT 276
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLT+TT +GVRS LP+++Y KAIDI++ C VFVFAAL+E+A VNY
Sbjct: 277 TVLTLTTQGSGVRSELPKVAYAKAIDIWMAACLVFVFAALVEFALVNY 324
>gi|224496443|gb|ACN52598.1| gamma-aminobutyric acid receptor isoform 3b [Plutella xylostella]
Length = 485
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 39 NISAILDSFSISYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 98
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 99 RLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHYSGSITRSI 158
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 159 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 218
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 219 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 278
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 279 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 334
>gi|8393393|ref|NP_058985.1| gamma-aminobutyric acid receptor subunit delta precursor [Rattus
norvegicus]
gi|544363|sp|P18506.2|GBRD_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit delta;
AltName: Full=GABA(A) receptor subunit delta; Flags:
Precursor
gi|204208|gb|AAA41182.1| GABA-A receptor delta subunit [Rattus norvegicus]
gi|204216|gb|AAC42035.1| GABA-A receptor delta-subunit [Rattus norvegicus]
gi|56585218|gb|AAH87714.1| Gamma-aminobutyric acid (GABA) A receptor, delta [Rattus
norvegicus]
gi|149024799|gb|EDL81296.1| gamma-aminobutyric acid A receptor, delta [Rattus norvegicus]
Length = 449
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/288 (49%), Positives = 201/288 (69%), Gaps = 3/288 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 47 LMEGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 106
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 107 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 166
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +++ESYGY+ D+V YW E + G++ QL QFTI + T +
Sbjct: 167 DLAKYPMDEQECMLDLESYGYSSEDIVYYWSENQEQIHGLDRLQLAQFTITSYRFTTELM 226
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F+L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 227 NFKSAGQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 286
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 287 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 334
>gi|306448455|gb|ADM88010.1| ionotropic GABA-aminobutyric acid receptor RDL3-3a6a [Bombyx mori]
Length = 489
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 144/296 (48%), Positives = 198/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 37 NISAILDSFSISYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 96
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 97 RLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 156
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+V WK+ + V E QLPQF +
Sbjct: 157 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIVYVWKDGASSVGMSSEVQLPQFRV 216
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH L+TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 217 LGHRQRATVVTLSTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 276
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VF +LLEYA V Y
Sbjct: 277 ARVQLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFTSLLEYATVGY 332
>gi|397739453|gb|AFO62383.1| GABA-gated chloride channel, partial [Laodelphax striatella]
Length = 400
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 196/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 6 NISAILDPFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 65
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 66 RLAFRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 125
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 126 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKV 185
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 186 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 245
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 246 ARVNLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 301
>gi|18858761|ref|NP_571857.1| glycine receptor subunit alpha-4 [Danio rerio]
gi|11322384|emb|CAC16687.1| glycine receptor alphaZ2 subunit [Danio rerio]
Length = 456
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/288 (49%), Positives = 199/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYSEYPDAS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D Q CT+++ES+GYT+ D++ W + PV+ ++ LPQF + LG+ T
Sbjct: 176 KNFPMDIQTCTMQLESFGYTMNDLIFEWLSDNPVQVADDLTLPQFVLKEEKDLGYCT--- 232
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGIT
Sbjct: 233 -KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGIT 291
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C + VFAALLEYAAVN+
Sbjct: 292 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLIVFAALLEYAAVNF 339
>gi|338729463|ref|XP_001489094.3| PREDICTED: glycine receptor subunit alpha-4-like [Equus caballus]
Length = 457
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF + LG+ T
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 234
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 235 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 292
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 341
>gi|2245681|gb|AAB62572.1| GABA-gated chloride channel isoform a3 [Heliothis virescens]
Length = 481
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 35 NISAILDSFSISYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 94
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 95 RLAYKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHYSGSITRSI 154
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 155 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 214
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 215 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 274
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 275 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 330
>gi|306448449|gb|ADM88007.1| ionotropic GABA-aminobutyric acid receptor RDL1-3a6a [Bombyx mori]
Length = 482
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 199/296 (67%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 39 NISAILDSFSISYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 98
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 99 RLAYKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHYSGSITRSI 158
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +WK+ + V E QLPQF +
Sbjct: 159 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYHWKDGHSSVGMSNEVQLPQFRV 218
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 219 LGHRQRATVITLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 278
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 279 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 334
>gi|55620730|ref|XP_526252.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Pan
troglodytes]
gi|397502590|ref|XP_003821935.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Pan
paniscus]
Length = 467
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 224/363 (61%), Gaps = 14/363 (3%)
Query: 6 IIRIPDFNSENELESQIGNSDSEKLRLCHKKSATTERLANVT--QTISQLLH--GYDIRL 61
II IP+ + + ++ S + C +++ + + Q QLLH D +
Sbjct: 15 IILIPNVCAASNIKMTHQRCSSSMKQTCKQETRMKKDDSTKVRPQKYEQLLHIEDNDFAM 74
Query: 62 RPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGD 120
RP FGG P+ VG+D+ + S DSISE +MD+T+T YL YWKD+RL+F S+ ++ +T
Sbjct: 75 RPGFGGSPVPVGIDVHVESIDSISETNMDFTMTFYLRHYWKDERLSFLSTANKSMTFDHR 134
Query: 121 FAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLD 180
KIWVPD FF + K S++HD T N ++R++ DG++ +R T + C MD +PLD
Sbjct: 135 LTRKIWVPDIFFVHSKRSYIHDTTMENIMLRVHPDGNVLLSLRITVSAMCFMDFSRFPLD 194
Query: 181 NQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEKLA----T 234
QNC++E+ESY Y D+++YWK + E L QF I E LA T
Sbjct: 195 TQNCSLELESYAYNEDDLMLYWKHGNKSLNTEEHMSLSQFFI---EDFSASSGLAFYSST 251
Query: 235 GTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 294
G Y RL ++F L+R++ +FV QTY P+IL+VMLSWVSFWI+ A ARV+LGITTVLTM+
Sbjct: 252 GWYNRLFINFVLRRHVFFFVLQTYFPAILMVMLSWVSFWIDRRAVPARVSLGITTVLTMS 311
Query: 295 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPTP 354
TI T V +S+P++SY+KA+D+YL + +FVF +++EYAAVNY + K+ K + +
Sbjct: 312 TIITAVSASMPQVSYLKAVDVYLWVSSLFVFLSVIEYAAVNYLTTVEERKQFKKTGKISR 371
Query: 355 LGN 357
+ N
Sbjct: 372 MYN 374
>gi|395546413|ref|XP_003775082.1| PREDICTED: glycine receptor subunit alpha-4 [Sarcophilus harrisii]
Length = 470
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 151/323 (46%), Positives = 209/323 (64%), Gaps = 21/323 (6%)
Query: 31 RLCHKKSATTERLANVTQTIS------QLL---HGYDIRLRPNFGGDPLYVGMDLTIASF 81
RL K N+ Q +S +L+ GYD R+RPNF G P+ V ++ I SF
Sbjct: 24 RLVSGKEEVKSASKNIPQPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSF 83
Query: 82 DSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFL 140
S++E +MDY + ++L Q W D RLA+ D+ L L + IW PD FFAN+K +
Sbjct: 84 SSVTETTMDYRVNVFLRQQWNDPRLAYLEYPDDSLDLDPSMLDSIWKPDLFFANEKGANF 143
Query: 141 HDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVM 200
H+VT NKL+R+ +GS+ Y +R T L+C MDL +P+D Q CT+++ES+GYT+ D+V
Sbjct: 144 HEVTTDNKLLRIFKNGSVLYSIRLTLVLSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVF 203
Query: 201 YWKE--TPVRGVEEAQLPQFTI-----LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYF 253
W E V+ E LPQF + LG+ T + TG + + + F L+R +GY+
Sbjct: 204 EWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT----KYYNTGKFTCIEVKFHLERQMGYY 259
Query: 254 VFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAI 313
+ Q Y+PS+LIV+LSWVSFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAI
Sbjct: 260 LIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAI 319
Query: 314 DIYLVMCFVFVFAALLEYAAVNY 336
DI++ +C +FVFAALLEYAAVN+
Sbjct: 320 DIWMAVCLLFVFAALLEYAAVNF 342
>gi|296206511|ref|XP_002750247.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta
[Callithrix jacchus]
Length = 430
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/288 (49%), Positives = 202/288 (70%), Gaps = 3/288 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 23 LIAGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 82
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 83 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 142
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +++ESYGY+ D+V YW E+ + G+++ QL QFTI + T +
Sbjct: 143 DLAKYPMDEQECMLDLESYGYSSEDIVYYWSESQEHIHGLDKLQLAQFTITSYRFTTELM 202
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 203 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 262
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 263 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 310
>gi|160714735|gb|ABX47168.1| GABA-gated chloride channel alpha subunit [Plutella xylostella]
Length = 485
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 39 NISSILDSFSISYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 98
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 99 RLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHYSGSITRSI 158
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 159 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 218
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 219 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 278
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 279 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 334
>gi|311276712|ref|XP_003135319.1| PREDICTED: glycine receptor subunit alpha-4-like [Sus scrofa]
Length = 457
Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 143/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF + LG+ T
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 234
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 235 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 292
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 341
>gi|449505422|ref|XP_002191130.2| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Taeniopygia guttata]
Length = 422
Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 144/291 (49%), Positives = 205/291 (70%), Gaps = 4/291 (1%)
Query: 49 TISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF 108
TI +++ GY+ LRP F P+ VGM L IAS D+ISE++MDYT T++L Q W D+RL F
Sbjct: 16 TIQKIIKGYNKYLRPFFDNGPVSVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLCF 75
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
++ L+L G E +WVPDTF + K SFLHDVT N+L+R+ +G++ Y +R TTT+
Sbjct: 76 DG-NKSLSLDGRLVEMLWVPDTFIVDSKKSFLHDVTVENRLIRIYPNGTVLYAIRITTTV 134
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
+C MDL YP+D Q CT+++ES+GY + DV+ YW VRG++ QL Q+T+ H T+
Sbjct: 135 SCSMDLTKYPMDKQTCTLQLESWGYNINDVMFYWTRGNDSVRGLDTLQLAQYTVEDHFTS 194
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+ TG Y +L F+L+RNI YF+ +TY+PSIL+V+LSWVSFWI+ + AR+ +G
Sbjct: 195 VTEAVYETGRYPKLVFHFELKRNILYFILETYVPSILLVVLSWVSFWISQSSVPARICIG 254
Query: 287 ITTVLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+TTVLTMTT+ G R+SLP + ++KAID+YL +CF F+F ALLEYA ++
Sbjct: 255 VTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALLEYAVTHF 305
>gi|351707180|gb|EHB10099.1| Glycine receptor subunit alpha-4 [Heterocephalus glaber]
Length = 488
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 143/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 88 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYWVNVFLRQQWNDPRLAYQEYPDDS 147
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 148 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLMLSCPMDL 207
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF + LG+ T +
Sbjct: 208 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTKN 267
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 268 YN----TGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 323
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 324 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 372
>gi|18448711|gb|AAL69899.1|AF462147_1 glycine receptor alpha 4 subunit [Mus musculus]
Length = 416
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 143/289 (49%), Positives = 199/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 16 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 75
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L+ E IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 76 LDLNPSMLESIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 135
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D++ W E V+ E LPQF + LG+ T
Sbjct: 136 KNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 193
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 194 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 251
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 252 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 300
>gi|194770055|ref|XP_001967114.1| GF15901 [Drosophila ananassae]
gi|190618585|gb|EDV34109.1| GF15901 [Drosophila ananassae]
Length = 212
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 138/150 (92%), Positives = 143/150 (95%)
Query: 199 VMYWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTY 258
VMYWK PVRGVE+A LPQFTI+G+ETNDRKE+LATG YQRLSLSFKLQRNIGYFVFQTY
Sbjct: 3 VMYWKPMPVRGVEDADLPQFTIIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTY 62
Query: 259 LPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLV 318
LPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLV
Sbjct: 63 LPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLV 122
Query: 319 MCFVFVFAALLEYAAVNYSYWADRAKKKPK 348
MCFVFVFAALLEYAAVNY+YW RAKKK K
Sbjct: 123 MCFVFVFAALLEYAAVNYTYWGKRAKKKIK 152
>gi|281342623|gb|EFB18207.1| hypothetical protein PANDA_015554 [Ailuropoda melanoleuca]
Length = 397
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 143/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 37 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYLEYPDDS 96
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 97 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 156
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF + LG+ T
Sbjct: 157 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 214
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 215 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 272
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 273 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 321
>gi|269856295|gb|ACZ51430.1| GABA-gated chloride channel [Nasonia vitripennis]
Length = 460
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 142/296 (47%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 5 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 64
Query: 105 RLAFSSED--EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF E+L++ +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 65 RLAFKKRAGVEILSVGSEFIKNIWVPDTFFVNEKQSYFHVATTSNEFIRIHHTGSITRSI 124
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E V + LPQF +
Sbjct: 125 RLTITASCPMNLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGLASVGVSNDVSLPQFKV 184
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 185 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 244
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 245 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 300
>gi|403273149|ref|XP_003928384.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Saimiri
boliviensis boliviensis]
Length = 467
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 148/319 (46%), Positives = 208/319 (65%), Gaps = 12/319 (3%)
Query: 48 QTISQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
Q QLLH D +RP FGG P+ VG+D+ + S DSISE +MD+T+T YL YWKD+R
Sbjct: 59 QKYEQLLHIEDNDFAMRPGFGGSPVPVGIDVHVESIDSISETNMDFTMTFYLRHYWKDER 118
Query: 106 LAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
L+F S+ ++ +T +KIWVPD FF + K SF+HD T N ++R++ DG++ +R
Sbjct: 119 LSFPSAVNKSMTFDHRLIQKIWVPDIFFVHSKRSFIHDTTMENIMLRVHPDGNVLLSLRI 178
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG 222
T + C MD +PLD QNC++E+ESY Y D+++YWK + E L QF I
Sbjct: 179 TVSAMCFMDFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNESLNTGEHISLSQFFI-- 236
Query: 223 HETNDRKEKLA----TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEA 278
E LA TG Y RL ++F L+R+I +FV QTY P+IL+VMLSWVSFWI+ A
Sbjct: 237 -EEFSASSGLAFYGSTGWYNRLFINFVLRRHIFFFVLQTYFPAILMVMLSWVSFWIDRRA 295
Query: 279 TSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSY 338
ARV+LGITTVLTM+TI T V +S+P++SY+KA+D+YL + +FVF +++EYAAVNY
Sbjct: 296 VPARVSLGITTVLTMSTIITAVGASMPQVSYLKAVDVYLWVSSLFVFLSVIEYAAVNYLT 355
Query: 339 WADRAKKKPKAKEPTPLGN 357
+ K+ K + + + N
Sbjct: 356 TVEERKQFKKTGKISRMYN 374
>gi|168229184|ref|NP_001108214.1| gamma-aminobutyric acid (GABA) A receptor, pi precursor [Danio
rerio]
gi|166796467|gb|AAI59113.1| Zgc:171544 protein [Danio rerio]
Length = 447
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 147/309 (47%), Positives = 210/309 (67%), Gaps = 6/309 (1%)
Query: 31 RLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMD 90
R+ A TE + + TI +L+ GY+ LRP FG P+ VGM L IAS D+ISE++MD
Sbjct: 18 RIMDGSVANTEEI--LPPTIQRLMKGYNKYLRPFFGNGPVTVGMSLDIASIDTISEINMD 75
Query: 91 YTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLV 150
YT T++L Q W D+RL F ++ L+L G E +WVPDTF + K SFLHD+T N+L+
Sbjct: 76 YTATIFLRQRWTDERLCFDG-NKSLSLDGRLVELLWVPDTFIVDSKKSFLHDITVENRLI 134
Query: 151 RLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVR 208
R+ +G++ Y +R TTT+AC MDL YP+D Q C +++ES+GY V DVV YW V
Sbjct: 135 RIFPNGTVLYALRITTTVACSMDLTKYPMDRQTCMLQLESWGYNVKDVVFYWTRGNQSVS 194
Query: 209 GVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLS 268
G++ QL Q+T+ H T++ + TG Y +L FKL+R+I YF+ +TY+PS +V+LS
Sbjct: 195 GLDHLQLAQYTLEDHYTSESEAVYETGNYPKLIFHFKLKRSILYFILETYVPSSALVVLS 254
Query: 269 WVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAA 327
WVSFWI+ + AR+ +G+TTVLTMTT+ G R+SLP + ++KAID+YL +CF F+F A
Sbjct: 255 WVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFGA 314
Query: 328 LLEYAAVNY 336
L+EYA ++
Sbjct: 315 LIEYAVAHF 323
>gi|253880|gb|AAB22967.1| GABAA receptor delta subunit [Mus sp.]
Length = 449
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 142/288 (49%), Positives = 201/288 (69%), Gaps = 3/288 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 47 LMEGYARNFRPGIGGAPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 106
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 107 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 166
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-TNDRK 229
DL YPLD Q C +++ESYGY+ D+V YW E + G++ QL QFTI + T +
Sbjct: 167 DLAKYPLDEQECMLDLESYGYSSEDIVYYWSENQEQIHGLDRLQLAQFTITSYRFTTELM 226
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F+L+RN G ++ Q+++PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 227 NFKSAGQFPRLSLHFQLRRNRGVYIIQSHMPSVLLVAMSWVSFWISQAAVPARVSLGITT 286
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 287 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 334
>gi|395860492|ref|XP_003802546.1| PREDICTED: glycine receptor subunit alpha-4 [Otolemur garnettii]
Length = 457
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 143/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF + LG+ T
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 234
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 235 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 292
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 341
>gi|224496441|gb|ACN52597.1| gamma-aminobutyric acid receptor isoform 3a [Plutella xylostella]
Length = 485
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 39 NISAILDSFSISYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 98
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 99 RLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHYSGSITRSI 158
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 159 RLTITASCPMNLQYFPMDRQLCHMEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 218
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 219 LGHRQRAMEVSLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 278
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 279 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 334
>gi|296236669|ref|XP_002763428.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta
[Callithrix jacchus]
Length = 627
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 134/313 (42%), Positives = 209/313 (66%), Gaps = 8/313 (2%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + KS E A V + + ++L YD+RLRPNFGG PL V + + I S + ISE++M
Sbjct: 45 LNLFNCKSCANE--AVVQKILDRVLSRYDVRLRPNFGGAPLPVRISIYITSIEQISEMNM 102
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYT+TM+ +Q WKD RLA+ LTL EK+WVPD +F N + F+HDVT N++
Sbjct: 103 DYTVTMFFHQTWKDSRLAYYETTLNLTLDYRMYEKLWVPDCYFLNSNDGFVHDVTVENRV 162
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPV 207
+L+ DG + YG++ TTT AC +DLH +P+D Q C + +ESYGYTV D++++W + +
Sbjct: 163 FQLHPDGMVQYGIQLTTTAACSLDLHKFPMDKQACKLVVESYGYTVEDIILFWDDNGNAI 222
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
+E +PQFT LG ++ TG+Y RL L F++QR++ + ++PS+L +
Sbjct: 223 HMTKELHIPQFTFLGRTITSKEVYFYTGSYIRLILKFQVQRDVNSY----FVPSVLTTIT 278
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SW+SFW+N +++ARV +G+T++L +TT+ + +R +P IS +KAIDIY+++C FVF +
Sbjct: 279 SWISFWMNCHSSAARVTIGLTSMLILTTVDSHLRDKVPNISCIKAIDIYILVCLFFVFLS 338
Query: 328 LLEYAAVNYSYWA 340
L+EY +NY +++
Sbjct: 339 LVEYVYINYLFYS 351
>gi|4691327|emb|CAB41615.1| Gaba-gated chloride channel [Heliothis virescens]
Length = 494
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + L YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 42 NISAILDSLSVSYDKRVRPNYGGPPVDVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 101
Query: 105 RLAF--SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ S+ E L++ +F IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 102 RLAYKKSTGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 161
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C MDL Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 162 RLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 221
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + ++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 222 LGHRQRAMEISLTTGNYSRLACEIQFVGSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 281
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VF +LLEYA V Y
Sbjct: 282 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFTSLLEYATVGY 337
>gi|325995208|gb|ADZ49077.1| RE22322p [Drosophila melanogaster]
Length = 606
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 144/295 (48%), Positives = 196/295 (66%), Gaps = 4/295 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 117
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 118 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 177
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 178 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 237
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 238 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATP 297
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVN 335
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V
Sbjct: 298 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVG 352
>gi|307611925|ref|NP_001182630.1| ionotropic GABA-aminobutyric acid receptor RDL3 precursor [Bombyx
mori]
gi|306448461|gb|ADM88013.1| ionotropic GABA-aminobutyric acid receptor RDL3-3b6b [Bombyx mori]
Length = 489
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 196/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 37 NISAILDSFSISYDKRVRPNYGGPPVEVGITMYVLSISSLSEVHMDFTLDFYFRQFWTDP 96
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 97 RLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 156
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V +E LPQF +
Sbjct: 157 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSKEVSLPQFKV 216
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 217 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 276
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VF +LLEYA V Y
Sbjct: 277 ARVQLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFTSLLEYATVGY 332
>gi|348535804|ref|XP_003455388.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta-like
[Oreochromis niloticus]
Length = 504
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 147/305 (48%), Positives = 209/305 (68%), Gaps = 6/305 (1%)
Query: 50 ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
+ L+ GY RP GG P+ V M + +AS D ISE +M+YT+T++L Q W DDRL+++
Sbjct: 87 LDDLMKGYARNFRPGIGGPPVNVAMAIEVASIDHISEANMEYTMTVFLRQSWHDDRLSYN 146
Query: 110 SEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLA 169
++ L L F +K+W+PDTF N K+++ HDVT NKL+RL +G I Y R T+T+A
Sbjct: 147 HTNKTLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPNGVILYSSRITSTVA 206
Query: 170 CMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHETND 227
C MDL YP+D Q C +++ESYGY+ D+V +W E+ + G+++ +L QFTI + +
Sbjct: 207 CDMDLTKYPMDEQECMLDLESYGYSSEDIVYHWSESQRHIHGLDKLELSQFTITDYRFDT 266
Query: 228 RKEKL-ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+ G + RLSL F+L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV+LG
Sbjct: 267 EMMNFKSAGRFPRLSLRFQLRRNRGVYIIQSYMPSILLVAMSWVSFWISQSAVPARVSLG 326
Query: 287 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-RAKK 345
ITTVLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +Y+ AD R K+
Sbjct: 327 ITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALIEYAFAHYN--ADYRLKE 384
Query: 346 KPKAK 350
K K K
Sbjct: 385 KAKVK 389
>gi|410915546|ref|XP_003971248.1| PREDICTED: glycine receptor subunit alpha-3-like [Takifugu
rubripes]
Length = 460
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 140/288 (48%), Positives = 199/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+ D+
Sbjct: 26 GYDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYKEYPDDS 85
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 86 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMDL 145
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D+Q CT+++ES+GYT+ D++ W + V+ ++ LPQF + LG+ T
Sbjct: 146 KNFPMDSQTCTMQLESFGYTMNDLIFEWLDVGAVQVADDLMLPQFVLKEEKGLGYCT--- 202
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+L V+LSWVSFWIN +A ARV LGIT
Sbjct: 203 -KHYNTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGIT 261
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 262 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 309
>gi|224503956|gb|ACN53550.1| gamma-aminobutyric acid receptor isoform 3b [Plutella xylostella]
Length = 458
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 144/297 (48%), Positives = 197/297 (66%), Gaps = 4/297 (1%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
N++ + YD R++PN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 11 VNISAILDSFSISYDKRVKPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTD 70
Query: 104 DRLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYG 161
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT
Sbjct: 71 PRLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHYSGSITRS 130
Query: 162 MRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFT 219
+R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF
Sbjct: 131 IRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFK 190
Query: 220 ILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT 279
+LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 191 VLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNAT 250
Query: 280 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 251 PARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 307
>gi|345478909|ref|XP_001601103.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta [Nasonia
vitripennis]
Length = 476
Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 142/296 (47%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 21 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 80
Query: 105 RLAFSSED--EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF E+L++ +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 81 RLAFKKRAGVEILSVGSEFIKNIWVPDTFFVNEKQSYFHVATTSNEFIRIHHTGSITRSI 140
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E V + LPQF +
Sbjct: 141 RLTITASCPMNLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGLASVGVSNDVSLPQFKV 200
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 201 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 260
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 261 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 316
>gi|301781106|ref|XP_002925968.1| PREDICTED: glycine receptor subunit alpha-4-like [Ailuropoda
melanoleuca]
Length = 457
Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 143/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYLEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF + LG+ T
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 234
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 235 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 292
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 341
>gi|817957|emb|CAA53468.1| glycine receptor subunit alpha 4 [Mus musculus]
Length = 337
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 33 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 92
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 93 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 152
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D++ W E V+ E LPQF + LG+ T
Sbjct: 153 KNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 210
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 211 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 268
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 269 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 317
>gi|411147305|dbj|BAM66322.1| GABA-gated chloride channel [Oulema oryzae]
Length = 475
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 196/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV+ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 36 NVSAILDSFSASYDKRVRPNYGGPPVDVGVTMYVLSISSLSEVQMDFTLDFYFRQFWTDP 95
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF V TLS +F + +WVPDTFF N+K S H T N+ +R++ GSIT +
Sbjct: 96 RLAFRKRPGVETLSVGSEFIKNMWVPDTFFVNEKQSSFHIATTLNEFIRIHHSGSITRSI 155
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 156 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKV 215
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 216 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 275
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 276 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 331
>gi|74008431|ref|XP_549155.2| PREDICTED: glycine receptor subunit alpha-4 [Canis lupus
familiaris]
Length = 457
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 199/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYQEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF + LG+ T
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 234
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV+LGI
Sbjct: 235 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVSLGI 292
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 341
>gi|149731732|ref|XP_001502550.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like
[Equus caballus]
Length = 468
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 141/294 (47%), Positives = 198/294 (67%), Gaps = 12/294 (4%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF- 108
QL H +D RP FGG P+ VG+D+ + S DSISEV+MD+T+T YL YWKD+RL+F
Sbjct: 63 QLFHIEDHDFATRPGFGGSPVPVGIDVQVESIDSISEVNMDFTMTFYLRHYWKDERLSFP 122
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S+ + +T +KIWVPD FF + K SF+HD T N ++R++ DG++ + +R T +
Sbjct: 123 STTNRSMTFDHRLIKKIWVPDIFFVHSKRSFIHDTTMENIMLRVHPDGNVLFSLRITVSA 182
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
C MD +PLD QNC++E+ESY Y D+++YWK + E L QF + E
Sbjct: 183 MCFMDFGRFPLDTQNCSLELESYAYNEEDLMLYWKHGNKSLNTDEHISLSQFFV---EEF 239
Query: 227 DRKEKLA----TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
A TG Y RL ++F L+R+I +F+ QTY P++L+VMLSWVSFWI+ A AR
Sbjct: 240 SASSGFAFYSSTGWYNRLFINFVLRRHIFFFMLQTYFPAVLMVMLSWVSFWIDRRAVPAR 299
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
V+LGITTVLTM TI +GV +S+P++SYVKA+D+YL + +FVF +++EYAAVNY
Sbjct: 300 VSLGITTVLTMATIVSGVSASMPQVSYVKAVDVYLWVSSLFVFLSVIEYAAVNY 353
>gi|355344076|gb|AER59667.1| gamma-aminobutyric receotor alpha2 subunit [Spodoptera litura]
Length = 499
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 144/296 (48%), Positives = 196/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + L YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ + Q+W D
Sbjct: 42 NISAILDSLSVSYDKRVRPNYGGPPVDVGVTMYVLSISSLSEVKMDFTLDFHFRQFWTDP 101
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 102 RLAYKKRTGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 161
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C MDL Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQ +
Sbjct: 162 RLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQSKV 221
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 222 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 281
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 282 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 337
>gi|306448457|gb|ADM88011.1| ionotropic GABA-aminobutyric acid receptor RDL3-3a6b [Bombyx mori]
Length = 489
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 196/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 37 NISAILDSFSISYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 96
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 97 RLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 156
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V +E LPQF +
Sbjct: 157 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSKEVSLPQFKV 216
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 217 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 276
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VF +LLEYA V Y
Sbjct: 277 ARVQLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFTSLLEYATVGY 332
>gi|269856293|gb|ACZ51429.1| GABA-gated chloride channel [Nasonia vitripennis]
Length = 460
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 142/296 (47%), Positives = 197/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 5 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 64
Query: 105 RLAFSSED--EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF E+L++ +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 65 RLAFKKRAGVEILSVGSEFIKNIWVPDTFFVNEKQSYFHVATTSNEFIRIHHTGSITRSI 124
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W V E +LPQF +
Sbjct: 125 RLTITASCPMNLQYFPMDRQLCNIEIESFGYTMRDIRYKWNSGLQSVGISSEVELPQFRV 184
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH L+TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 185 LGHRQRQTTIHLSTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 244
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 245 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 300
>gi|432954882|ref|XP_004085578.1| PREDICTED: gamma-aminobutyric acid receptor subunit delta-like,
partial [Oryzias latipes]
Length = 354
Score = 286 bits (732), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 146/305 (47%), Positives = 210/305 (68%), Gaps = 6/305 (1%)
Query: 50 ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
+ +L+ GY RP GG P+ V M + +AS D ISE +M+YT+T++L Q W DDRL+++
Sbjct: 45 LDELMKGYARNFRPGIGGPPVNVAMAIEVASIDHISEANMEYTMTIFLRQSWHDDRLSYN 104
Query: 110 SEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLA 169
++ L L F +K+W+PDTF N K+++ HDVT NKL+RL +G I Y R T+T+A
Sbjct: 105 HTNKTLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPNGVILYSSRITSTVA 164
Query: 170 CMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHE-TN 226
C MDL YP+D Q C +++ESYGY+ D+V +W ++ + G+++ +L QFTI+ +
Sbjct: 165 CDMDLTKYPMDEQECMLDLESYGYSSEDIVYHWSDSQRHIHGLDKLELSQFTIIDYRFVT 224
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+ + G + RLSL F+L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV LG
Sbjct: 225 ELMNFKSAGRFPRLSLRFQLRRNRGVYIIQSYMPSILLVAMSWVSFWISQSAVPARVTLG 284
Query: 287 ITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-RAKK 345
ITTVLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +Y+ AD R K+
Sbjct: 285 ITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALIEYAFAHYN--ADYRLKE 342
Query: 346 KPKAK 350
K K K
Sbjct: 343 KSKVK 347
>gi|431899510|gb|ELK07476.1| Glycine receptor subunit alpha-4 [Pteropus alecto]
Length = 454
Score = 286 bits (732), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D++ W E V+ E LPQF + LG+ T
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 234
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 235 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 292
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 341
>gi|224503955|gb|ACN53549.1| gamma-aminobutyric acid receptor isoform 3a [Plutella xylostella]
Length = 458
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 144/297 (48%), Positives = 197/297 (66%), Gaps = 4/297 (1%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
N++ + YD R++PN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 11 VNISAILDSFSISYDKRVKPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTD 70
Query: 104 DRLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYG 161
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT
Sbjct: 71 PRLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHYSGSITRS 130
Query: 162 MRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFT 219
+R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF
Sbjct: 131 IRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFK 190
Query: 220 ILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT 279
+LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 191 VLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNAT 250
Query: 280 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 251 PARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 307
>gi|71984488|ref|NP_498532.3| Protein LGC-38 [Caenorhabditis elegans]
gi|373218821|emb|CCD63396.1| Protein LGC-38 [Caenorhabditis elegans]
Length = 459
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/294 (47%), Positives = 202/294 (68%), Gaps = 2/294 (0%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NVT+ + +L+ +D R+RPN+GG P+ V + + + ++SEVSMDYT+ +YL Q WKD
Sbjct: 50 NVTRLLDKLIASHDRRIRPNYGGPPIEVNITAHVTTISAVSEVSMDYTLDLYLRQIWKDP 109
Query: 105 RLAFSSE-DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RLA+ S+ ++ LT+ D + IW PDTFF N+K SF H+ T N +R++ G++ +R
Sbjct: 110 RLAWESDVEDSLTIGIDMVKTIWTPDTFFPNEKKSFFHEATSHNSFLRIDNHGNVLRSIR 169
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEE-AQLPQFTILG 222
T T C M LH +PLD Q C +E+ESYGY+ D++ +W T ++E L FTI
Sbjct: 170 LTVTANCPMSLHTFPLDRQECALEVESYGYSTKDIIYHWHGTNAVTIDENVHLAHFTIGE 229
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
H+ +R L+TG Y RL+ F +RNIG+++ Q Y PS LIV++SWVSFW+N EA AR
Sbjct: 230 HKHIERTISLSTGNYSRLTAYFLFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQAR 289
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
VA+G+TTVLTMTT+ T +SLP++SYVK++D++L +CF VFA+LLEYAA+ Y
Sbjct: 290 VAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLLEYAAIGY 343
>gi|449277142|gb|EMC85418.1| Gamma-aminobutyric acid receptor subunit pi [Columba livia]
Length = 414
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/291 (49%), Positives = 204/291 (70%), Gaps = 4/291 (1%)
Query: 49 TISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF 108
TI +++ GY+ LRP F P+ VGM L IAS D+ISE++MDYT T++L Q W D+RL F
Sbjct: 26 TIQKIIKGYNKYLRPFFDNGPVSVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLCF 85
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
++ L+L G E +WVPDTF + K SFLHD+T N+L+R+ +G++ Y +R TTT+
Sbjct: 86 DG-NKSLSLDGRLVEMLWVPDTFIVDSKKSFLHDITVENRLIRIYPNGTVLYALRITTTV 144
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHETN 226
AC MDL YP+D Q CT+++ES+GY + DV YW VRG++ +L Q+T+ H T+
Sbjct: 145 ACSMDLTKYPMDKQTCTLQLESWGYNINDVTFYWTRGNDSVRGLDTLRLAQYTVEDHFTS 204
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+ TG Y +L F+L+RNI YF+ +TY+PSIL+V+LSWVSFWI+ + AR+ +G
Sbjct: 205 VSEAVYETGHYPKLVFHFELKRNILYFILETYVPSILLVVLSWVSFWISQSSVPARICIG 264
Query: 287 ITTVLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+TTVLTMTT+ G R+SLP + ++KAID+YL +CF F+F ALLEYA ++
Sbjct: 265 VTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALLEYAVAHF 315
>gi|344286252|ref|XP_003414873.1| PREDICTED: glycine receptor subunit alpha-4-like [Loxodonta
africana]
Length = 458
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 197/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 58 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYQEYPDDS 117
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 118 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 177
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q C +++ES+GYT+ D+V W E V+ E LPQF + LG+ T
Sbjct: 178 KNFPMDIQTCAMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 235
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 236 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 293
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 294 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 342
>gi|440906155|gb|ELR56457.1| Glycine receptor subunit alpha-4 [Bos grunniens mutus]
Length = 457
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D++ W E V+ E LPQF + LG+ T
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 234
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 235 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 292
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 341
>gi|119575082|gb|EAW54695.1| hCG17971 [Homo sapiens]
Length = 458
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/289 (48%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S+++ +MDY + ++L Q W D RL++ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFSSVTKTTMDYRVNVFLRQQWNDPRLSYREYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C+MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCLMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF + LG T
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGCCT-- 234
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 235 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 292
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAA+N+
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAINF 341
>gi|156368051|ref|XP_001627510.1| predicted protein [Nematostella vectensis]
gi|156214422|gb|EDO35410.1| predicted protein [Nematostella vectensis]
Length = 319
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/308 (43%), Positives = 205/308 (66%), Gaps = 7/308 (2%)
Query: 36 KSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITM 95
KS + N T + LL GYD R+RP G+P+ V +D+ +++ ++ E++MD+TI +
Sbjct: 12 KSTPAGKYWNSTLVLKNLLEGYDRRIRPGSKGEPVVVYVDMYVSNIWAMQEMNMDFTIDI 71
Query: 96 YLNQYWKDDRLAFSSE--DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
YL QYW+D+RL F ++ +LTLS D ++IWVP T+F K ++ HDVT N L+++
Sbjct: 72 YLRQYWRDERLQFETQTPGAMLTLSSDINKQIWVPSTYFLATKKAYFHDVTTDNYLLQVK 131
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE-----TPVR 208
DGS+ Y +R T T +C +DL +P D Q+C++ +ESYGY DV+ W E + +
Sbjct: 132 PDGSLFYSIRLTITTSCRLDLRDFPHDTQSCSLSLESYGYQSTDVLYVWNERLDNTSAIY 191
Query: 209 GVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLS 268
++ +LPQF +LG + + K G + L +F+++R IGYF+ TY+PS +IV++S
Sbjct: 192 IHDDLELPQFEVLGVSRSAKMNKYNIGNHSSLVANFRMKRRIGYFLIDTYIPSTIIVIIS 251
Query: 269 WVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAAL 328
W+SFWI+ E ARVALGITTVLTMTT+ + R++LP++SYVKAID YL++C +FVF ++
Sbjct: 252 WISFWIDPETAPARVALGITTVLTMTTLISSARANLPKVSYVKAIDWYLLLCLIFVFGSI 311
Query: 329 LEYAAVNY 336
LEY V Y
Sbjct: 312 LEYTCVTY 319
>gi|402910975|ref|XP_003918120.1| PREDICTED: glycine receptor subunit alpha-4 [Papio anubis]
Length = 457
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RL++ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLSYREYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF + LG+ T
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 234
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 235 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 292
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 341
>gi|300793839|ref|NP_001178843.1| glycine receptor subunit alpha-4 precursor [Rattus norvegicus]
Length = 456
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D++ W E V+ E LPQF + LG+ T
Sbjct: 176 KNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 233
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 234 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 291
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 292 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|194248074|ref|NP_034427.2| glycine receptor subunit alpha-4 precursor [Mus musculus]
gi|78099775|sp|Q61603.3|GLRA4_MOUSE RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor
gi|70997254|gb|AAZ17380.1| glycine receptor alpha4 subunit [Mus musculus]
Length = 456
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D++ W E V+ E LPQF + LG+ T
Sbjct: 176 KNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 233
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 234 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 291
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 292 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>gi|296236079|ref|XP_002763171.1| PREDICTED: glycine receptor subunit alpha-4 [Callithrix jacchus]
Length = 452
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 197/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RL++ D
Sbjct: 52 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLSYQEYPDNS 111
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 112 LDLDPSMLDSIWKPDLFFANEKGASFHEVTTDNKLLRIFKNGNVLYSIRLTLVLSCPMDL 171
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF + LG+ T
Sbjct: 172 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 229
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 230 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 287
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 288 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 336
>gi|449269965|gb|EMC80700.1| Glycine receptor subunit alpha-4, partial [Columba livia]
Length = 432
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 141/289 (48%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 24 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 83
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 84 LDLDPSMLDSIWKPDLFFANEKGASFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 143
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D++ W ++ V+ E LPQF + LG+ T
Sbjct: 144 KNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQEAVQVAEGLTLPQFILRDEKDLGYCT-- 201
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 202 --KYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 259
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 260 TTVLTMTTQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 308
>gi|402858824|ref|XP_003893885.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Papio
anubis]
Length = 467
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 214/348 (61%), Gaps = 27/348 (7%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLH--GYDIRLRPNFGGDPLYVGMDL 76
E+++ DS K+R Q Q LH D +RP FGG P+ VG+D+
Sbjct: 45 ETRMKKDDSTKVR---------------PQKYEQPLHIEDNDFAMRPGFGGSPVPVGIDV 89
Query: 77 TIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFAND 135
+ S DSISE +MD+T+T YL YWKD+RL+F S+ ++ +T KIWVPD FF +
Sbjct: 90 HVESIDSISETNMDFTMTFYLRHYWKDERLSFPSTANKSMTFDHRLIRKIWVPDIFFVHS 149
Query: 136 KNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTV 195
K SF+HD T N ++R++ DG++ +R T + C MD +PLD QNC++E+ESY Y
Sbjct: 150 KRSFIHDTTMENIMLRVHPDGNVLLSLRITVSAMCFMDFSRFPLDTQNCSLELESYAYNE 209
Query: 196 LDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEKLA----TGTYQRLSLSFKLQRN 249
D+++YWK + E L QF I E LA TG Y RL ++F L+R+
Sbjct: 210 DDLMLYWKHGNKSLNTEEHMSLSQFFI---EDFSASSGLAFYSSTGWYNRLFINFVLRRH 266
Query: 250 IGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISY 309
I +FV QTY P+IL+VMLSWVSFWI+ A ARV+LGITTVLTM+TI T V +S+P++SY
Sbjct: 267 IFFFVLQTYFPAILMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITAVSASMPQVSY 326
Query: 310 VKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPTPLGN 357
+KA+D+YL + FVF +++EYAAVNY + K+ K + + + N
Sbjct: 327 LKAVDVYLWVSSFFVFLSVIEYAAVNYLTTVEERKQFKKTGKISRMYN 374
>gi|426257803|ref|XP_004022512.1| PREDICTED: glycine receptor subunit alpha-4 [Ovis aries]
Length = 457
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D++ W E V+ E LPQF + LG+ T
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 234
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 235 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 292
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 341
>gi|444515642|gb|ELV10946.1| Gamma-aminobutyric acid receptor subunit theta [Tupaia chinensis]
Length = 699
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 124/276 (44%), Positives = 196/276 (71%), Gaps = 2/276 (0%)
Query: 66 GGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKI 125
GG P+ V + + ++S + ISE +MDYTITM+ +Q WKD RLA+ + L+L E +
Sbjct: 141 GGAPVPVKVSIYVSSIEQISEKNMDYTITMFFHQTWKDSRLAYYETNLNLSLDSRLHEML 200
Query: 126 WVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCT 185
WVPD +F N KN+FLH+VT N++ RL+ DG++ YG+R T T AC +DL +PLD Q+C
Sbjct: 201 WVPDCYFLNSKNAFLHEVTTENRMFRLHPDGTVRYGIRLTATAACSLDLRKFPLDKQDCK 260
Query: 186 VEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLS 243
+E+ESYGYTV D++++W+ E V+ EE +PQFT LG ++ TG+Y+RL L
Sbjct: 261 LEVESYGYTVEDIILFWEDNEDAVQMTEELLIPQFTFLGRTVTSKEVYFYTGSYKRLILK 320
Query: 244 FKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSS 303
F++QR + ++ Q Y P++L + SW+SFW+++++++ARV LG++++L +TTI++ +R
Sbjct: 321 FQVQREVHGYLVQVYWPTVLTTIFSWISFWMDYDSSAARVTLGLSSMLILTTINSHLRDR 380
Query: 304 LPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
LP +SY+KAID+Y+++C FVF +LLEY +NY ++
Sbjct: 381 LPHVSYIKAIDVYILVCLFFVFLSLLEYVYINYLFY 416
>gi|118089348|ref|XP_001232995.1| PREDICTED: glycine receptor subunit alpha-4-like [Gallus gallus]
Length = 435
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/289 (48%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 36 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 95
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 96 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 155
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D++ W ++ V+ E LPQF + LG+ T
Sbjct: 156 KNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQEAVQVAEGLTLPQFILRDEKDLGYCT-- 213
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 214 --KYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 271
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 272 TTVLTMTTQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 320
>gi|432094422|gb|ELK25993.1| Glycine receptor subunit alpha-4 [Myotis davidii]
Length = 472
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/286 (49%), Positives = 196/286 (68%), Gaps = 6/286 (2%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 76 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWHDPRLAYQEYPDDS 135
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 136 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 195
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDR--KE 230
+P+D Q C +++ES+GYT+ D+V W E V+ E LPQF IL E + +
Sbjct: 196 KNFPMDIQTCIMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQF-ILRDEKDLSYCTK 254
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTV 290
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGITTV
Sbjct: 255 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 314
Query: 291 LTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
LTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 315 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 360
>gi|354499886|ref|XP_003512035.1| PREDICTED: glycine receptor subunit alpha-4 [Cricetulus griseus]
Length = 416
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 16 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 75
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 76 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 135
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D++ W E V+ E LPQF + LG+ T
Sbjct: 136 KNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 193
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 194 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 251
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 252 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 300
>gi|218156328|ref|NP_001019623.2| glycine receptor subunit alpha-4 isoform 1 precursor [Homo sapiens]
gi|262527577|sp|Q5JXX5.3|GLRA4_HUMAN RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor
Length = 417
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/289 (48%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI++ +MDY + ++L Q W D RL++ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFSSITKTTMDYRVNVFLRQQWNDPRLSYREYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C+MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCLMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF + LG T
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGCCT-- 234
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 235 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 292
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAA+N+
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAINF 341
>gi|403307748|ref|XP_003944345.1| PREDICTED: glycine receptor subunit alpha-4 [Saimiri boliviensis
boliviensis]
Length = 635
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 196/289 (67%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RL++ D
Sbjct: 235 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLSYQEYPDNS 294
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 295 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 354
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF + LG+ T
Sbjct: 355 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 412
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 413 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 470
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ C +FVFAALLEYAAVN+
Sbjct: 471 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAACLLFVFAALLEYAAVNF 519
>gi|149033178|gb|EDL87985.1| similar to Glycine receptor alpha-4 chain precursor (predicted)
[Rattus norvegicus]
Length = 416
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 16 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 75
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 76 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 135
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D++ W E V+ E LPQF + LG+ T
Sbjct: 136 KNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 193
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 194 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 251
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 252 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 300
>gi|224098606|ref|XP_002187221.1| PREDICTED: glycine receptor subunit alpha-4 [Taeniopygia guttata]
Length = 418
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/289 (48%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 19 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 78
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 79 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 138
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D++ W ++ V+ E LPQF + LG+ T
Sbjct: 139 KNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQEAVQVAEGLTLPQFILRDEKDLGYCT-- 196
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 197 --KYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 254
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 255 TTVLTMTTQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 303
>gi|297304473|ref|XP_001085545.2| PREDICTED: glycine receptor subunit alpha-4-like [Macaca mulatta]
Length = 457
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RL++ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLSYREYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF + LG+ T
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 234
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 235 --KYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 292
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 341
>gi|83405071|gb|AAI10631.1| Glycine receptor, alpha 4 subunit [Mus musculus]
gi|148691927|gb|EDL23874.1| glycine receptor, alpha 4 subunit [Mus musculus]
Length = 416
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 16 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 75
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 76 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 135
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D++ W E V+ E LPQF + LG+ T
Sbjct: 136 KNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 193
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 194 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 251
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 252 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 300
>gi|269785259|ref|NP_001161557.1| glycine receptor alpha 3 subunit-like protein precursor
[Saccoglossus kowalevskii]
gi|268054101|gb|ACY92537.1| glycine receptor alpha 3 subunit-like protein [Saccoglossus
kowalevskii]
Length = 450
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/332 (43%), Positives = 211/332 (63%), Gaps = 13/332 (3%)
Query: 45 NVTQT---ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYW 101
NVT T ++ LL YD R+RPNF GDP+ V +D+ I+ D+I+EV+MDY IT+ L Q W
Sbjct: 57 NVTSTSTFLNTLLKTYDKRIRPNFDGDPVNVTVDMLISRIDNINEVTMDYGITIVLRQTW 116
Query: 102 KDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYG 161
D RL +++ + + + + E+IWVPD FF N+K+S HD T N L+R++ G I Y
Sbjct: 117 VDTRLEYNAVKQHIPPTSELLERIWVPDMFFTNEKDSHFHDQTRDNVLLRISPSGEILYS 176
Query: 162 MRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTI 220
R T T+AC M L +P+D Q+C +++ESY YTV + V W + PV+ ++ +L QF I
Sbjct: 177 TRLTLTVACHMQLSRFPMDEQHCKLKMESYSYTVDEPVFVWTDYRPVQHEDDLELQQFDI 236
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
L +ET + TG + L L + L R +GY++ T+LPS L+V+LSWVSFWIN EA
Sbjct: 237 LENETIEIVHMYHTGNFSALELHYTLHRKLGYYIISTFLPSSLLVVLSWVSFWINPEAAP 296
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
ARVAL ITTVLT+TT++ VR LP++SYV A+D+++ C FVF +L+E+A VN+ S
Sbjct: 297 ARVALCITTVLTITTMAIAVRDDLPKVSYVTAVDVWMSSCLFFVFGSLVEFAFVNFVSSL 356
Query: 339 WADRAKKK-------PKAKEPTPLGNYIRLCI 363
+ KKK K K+ L + + C+
Sbjct: 357 RKNEKKKKTDLKINVEKTKDGNDLADAVEKCL 388
>gi|432899526|ref|XP_004076602.1| PREDICTED: glycine receptor subunit alpha-2-like [Oryzias latipes]
Length = 505
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/288 (48%), Positives = 199/288 (69%), Gaps = 11/288 (3%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+ D+
Sbjct: 73 GYDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYKEYPDDS 132
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 133 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMDL 192
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTI-----LGHETNDR 228
+P+D+Q CT+++ES+GYT+ D++ W + V+ ++ LPQF + LG+ T
Sbjct: 193 KNFPMDSQMCTMQLESFGYTMNDLIFEWLDVGAVQVADDLMLPQFVLKEEKGLGYCT--- 249
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGIT 288
+ TG + + + F L+R +GY++ Q Y+PS+L V+LSWVSFWIN +A ARV LGIT
Sbjct: 250 -KYYNTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGIT 308
Query: 289 TVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 309 TVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 356
>gi|355705027|gb|EHH30952.1| Glycine receptor subunit alpha-4 [Macaca mulatta]
gi|355757581|gb|EHH61106.1| Glycine receptor subunit alpha-4 [Macaca fascicularis]
Length = 453
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 198/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RL++ D+
Sbjct: 53 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLSYREYPDDS 112
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 113 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 172
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF + LG+ T
Sbjct: 173 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 230
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 231 --KYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 288
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 289 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 337
>gi|410989076|ref|XP_004000793.1| PREDICTED: glycine receptor subunit alpha-4 [Felis catus]
Length = 457
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 197/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYGEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGASFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF + LG+ T
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 234
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV L I
Sbjct: 235 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLDI 292
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 341
>gi|308465493|ref|XP_003095006.1| CRE-LGC-38 protein [Caenorhabditis remanei]
gi|308246271|gb|EFO90223.1| CRE-LGC-38 protein [Caenorhabditis remanei]
Length = 460
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/294 (47%), Positives = 201/294 (68%), Gaps = 2/294 (0%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NVT+ + +L+ +D R+RPN+GG P+ V + + + ++SEVSMDYT+ +YL Q WKD
Sbjct: 51 NVTRLLDKLIASHDRRIRPNYGGPPIEVNITAHVTTISAVSEVSMDYTLDLYLRQIWKDP 110
Query: 105 RLAFSSE-DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RLA+ S+ ++ LT+ D + IW PDTFF N+K SF H+ T N +R++ G++ +R
Sbjct: 111 RLAWESDVEDSLTIGIDMVKTIWTPDTFFPNEKKSFFHEATSHNSFLRIDSHGNVLRSIR 170
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEE-AQLPQFTILG 222
T T C M LH +PLD Q C +E+ESYGY+ D++ +W T ++E L FTI
Sbjct: 171 LTVTANCPMSLHTFPLDRQECALEVESYGYSTKDIIYHWHGTNAVTIDENVHLAHFTIGE 230
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
H +R L+TG Y RL+ F +RNIG+++ Q Y PS LIV++SWVSFW+N EA AR
Sbjct: 231 HYHIERTISLSTGNYSRLTAYFMFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQAR 290
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
VA+G+TTVLTMTT+ T +SLP++SYVK++D++L +CF VFA+LLEYAA+ Y
Sbjct: 291 VAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLLEYAAIGY 344
>gi|332861324|ref|XP_521197.3| PREDICTED: glycine receptor subunit alpha-4 [Pan troglodytes]
gi|397497800|ref|XP_003819692.1| PREDICTED: glycine receptor subunit alpha-4 [Pan paniscus]
Length = 457
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/286 (49%), Positives = 197/286 (68%), Gaps = 6/286 (2%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RL++ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFSSVTETTMDYRVNVFLRQQWNDPRLSYREYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDR--KE 230
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF IL E + +
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQF-ILRDEKDLGCCTK 235
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTV 290
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGITTV
Sbjct: 236 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 291 LTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
LTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 341
>gi|426396913|ref|XP_004064673.1| PREDICTED: glycine receptor subunit alpha-4 [Gorilla gorilla
gorilla]
Length = 457
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 197/289 (68%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RL++ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFSSVTETTMDYRVNVFLRQQWNDPRLSYREYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D+V W E V+ E LPQF + LG T
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGCCT-- 234
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 235 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 292
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 341
>gi|321464674|gb|EFX75680.1| hypothetical protein DAPPUDRAFT_55650 [Daphnia pulex]
Length = 499
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/306 (48%), Positives = 207/306 (67%), Gaps = 5/306 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NVT + +L GYD R+RPN+GG P+ VG+ + I S S+SEV MD+T Y QYWKD
Sbjct: 16 NVTAILDKLQRGYDKRVRPNYGGPPVEVGVTMFIISISSVSEVQMDFTTDFYFRQYWKDP 75
Query: 105 RLAFSSED--EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF E + +S ++ + IWVPDTFFAN+K+S+LH T N+ +R+ G I +
Sbjct: 76 RLAFDRLPGVERIMVSTEYLKNIWVPDTFFANEKSSYLHMATTSNEFLRITHLGEINRSI 135
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C++EIES+G+ + ++ +W + V + QLPQF +
Sbjct: 136 RLTITASCPMNLQYFPMDRQLCSIEIESFGFAMSEITYHWLGGKKAVDVSPDVQLPQFHV 195
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LG+ R E L TG Y R+SL + R++GY++ Q Y+PS LIV++SWVSFW+N +AT
Sbjct: 196 LGYRQGYRVEMLTTGNYSRMSLEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRQATP 255
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL-EYAAVNYSYW 339
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+IDI+L CFV VFA+LL +YA V Y
Sbjct: 256 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDIFLGTCFVMVFASLLGKYATVGYVEK 315
Query: 340 ADRAKK 345
R +K
Sbjct: 316 RIRLRK 321
>gi|410915042|ref|XP_003970996.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Takifugu rubripes]
Length = 457
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 145/351 (41%), Positives = 209/351 (59%), Gaps = 16/351 (4%)
Query: 5 QIIRIPDFNSENELESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPN 64
Q++R+ F S +GN SE ++ L N+T+ + +LL GYD RLRP
Sbjct: 15 QMLRLMPFPPPGGAGSVLGNQHSE----------SSIYLDNITRILDRLLDGYDNRLRPG 64
Query: 65 FGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEK 124
FGG V D+ + SF +S+V M+YT+ ++ Q W D+RL F E+L L+ K
Sbjct: 65 FGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEILRLNNLMVSK 124
Query: 125 IWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNC 184
IW PDTFF N K S H++T NKL R+ +G+I Y MR T C M L +P+D C
Sbjct: 125 IWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLMNFPMDGHAC 184
Query: 185 TVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFTILGHETNDRKEKLATGTYQRL 240
++ SY Y + ++V WK+ P+ VE Q L Q+ ++G + + K TG Y +
Sbjct: 185 PLKFGSYAYPISEIVYTWKKGPLSSVEVPQESSSLLQYDLIGQTVSSERLKSNTGEYVIM 244
Query: 241 SLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGV 300
++ F LQR +G+F+ QTY+P I+ V+L+ VSFWIN E+ AR GITTVLTMTT+S
Sbjct: 245 TVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTMTTLSISA 304
Query: 301 RSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SYWADRAKKKPKA 349
R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY + A+R +K A
Sbjct: 305 RHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAAA 355
>gi|159131954|gb|ABW88017.1| gamma-aminobutyric acid receptor [Drosophila melanogaster]
Length = 460
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 144/296 (48%), Positives = 196/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 117
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 118 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 177
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 178 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 237
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++S VSFW+N AT
Sbjct: 238 LGHRQRAMEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISRVSFWLNRNATP 297
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 298 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 353
>gi|224496445|gb|ACN52599.1| gamma-aminobutyric acid receptor isoform 3a [Plutella xylostella]
Length = 520
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 144/296 (48%), Positives = 195/296 (65%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + L YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 42 NISAILDSLSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 101
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
LA+ V TLS +F IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 102 SLAYKKRPGVETLSVGSEFIRNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 161
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C MDL Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 162 RLTITASCPMDLQYFPMDRQLCNIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 221
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++ Y++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 222 LGHRQRAMEISLTTGNYSRLACEIQFVRSMVYYLIQIYIPSGLIVIISWVSFWLNRNATP 281
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 282 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 337
>gi|110555506|gb|ABG75733.1| GABA-gated chloride channel [Apis mellifera]
Length = 445
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 144/296 (48%), Positives = 196/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 11 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 70
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 71 RLAFKKRTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 130
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W V E +LPQF +
Sbjct: 131 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNAGLQSVGISNEVELPQFRV 190
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH L+TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 191 LGHRQRHSTIHLSTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 250
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 251 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 306
>gi|327287938|ref|XP_003228685.1| PREDICTED: glycine receptor subunit alpha-4-like [Anolis
carolinensis]
Length = 472
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 142/293 (48%), Positives = 197/293 (67%), Gaps = 20/293 (6%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 59 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 118
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 119 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 178
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ------LPQFTI-----LGH 223
+P+D Q C +++ES+GYT+ D++ W V+G E Q LPQF + LG+
Sbjct: 179 KNFPMDIQTCIMQLESFGYTMNDLIFQW----VKGQEAVQVAEGLTLPQFILRDEKDLGY 234
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
T + TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV
Sbjct: 235 CT----KSYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARV 290
Query: 284 ALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
LGITTVLTMTT S G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 291 GLGITTVLTMTTQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 343
>gi|260827220|ref|XP_002608563.1| hypothetical protein BRAFLDRAFT_157776 [Branchiostoma floridae]
gi|229293914|gb|EEN64573.1| hypothetical protein BRAFLDRAFT_157776 [Branchiostoma floridae]
Length = 273
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 145/274 (52%), Positives = 178/274 (64%), Gaps = 15/274 (5%)
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTIT++L QYW+D+RLAF+ + L+L G AEK+WVPDTF N K SFLH VT NKL
Sbjct: 2 DYTITVFLRQYWRDERLAFAGSNHSLSLDGRLAEKLWVPDTFIPNAKESFLHKVTVDNKL 61
Query: 150 VRLNGDGSITYGMR--FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET-- 205
+RL DG I YGMR T C MDL YP+D+QNCT+ ESYGY D+ WK
Sbjct: 62 IRLFPDGGILYGMRQMITAKAECNMDLEKYPMDSQNCTLGFESYGYKTEDIRFRWKSGND 121
Query: 206 PVRGVEEAQLPQFTILGHETNDRKEKL--------ATGTYQRLSLSFKLQRNIGYFVFQT 257
+ GVE QL QF I + + TG Y + F L R YF+FQT
Sbjct: 122 SIYGVESLQLQQFKIGAYNVINGMATYESVLIYFHPTGDYSNVKFCFLLHRQAFYFIFQT 181
Query: 258 YLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYL 317
Y+PSIL+V+LSWV FWIN EA ARVALGITTVLTMTT+ G R+++P+ISY+KAID+YL
Sbjct: 182 YIPSILLVVLSWVGFWINAEAVPARVALGITTVLTMTTLIGGARATMPKISYIKAIDVYL 241
Query: 318 VMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKE 351
+ CF+F FAAL+EYAAVN+ KK +AK
Sbjct: 242 ITCFLFTFAALVEYAAVNFR---SSVKKMKEAKR 272
>gi|126165262|ref|NP_001075184.1| gamma-aminobutyric acid receptor subunit delta precursor [Bos
taurus]
gi|126010643|gb|AAI33558.1| Gamma-aminobutyric acid (GABA) A receptor, delta [Bos taurus]
gi|296478976|tpg|DAA21091.1| TPA: gamma-aminobutyric acid (GABA) A receptor, delta [Bos taurus]
Length = 450
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 141/288 (48%), Positives = 200/288 (69%), Gaps = 3/288 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG + V + + +AS D ISEV+M+YT+T++L+Q W+D RL+++ +
Sbjct: 46 LIEGYARNFRPGIGGPAVNVALAIEVASIDHISEVNMEYTMTVFLHQSWRDSRLSYNHTN 105
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 106 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 165
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C + +ESYGY+ D+V YW E + G+++ QL QFTI + T +
Sbjct: 166 DLAKYPMDEQECMLHLESYGYSSEDIVYYWSENQEQIHGLDKLQLAQFTITSYRFTTELM 225
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 226 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 285
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 286 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 333
>gi|440911706|gb|ELR61343.1| Gamma-aminobutyric acid receptor subunit delta, partial [Bos
grunniens mutus]
Length = 430
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 141/288 (48%), Positives = 200/288 (69%), Gaps = 3/288 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG + V + + +AS D ISEV+M+YT+T++L+Q W+D RL+++ +
Sbjct: 26 LIEGYARNFRPGIGGPAVNVALAIEVASIDHISEVNMEYTMTVFLHQSWRDSRLSYNHTN 85
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 86 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 145
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C + +ESYGY+ D+V YW E + G+++ QL QFTI + T +
Sbjct: 146 DLAKYPMDEQECMLHLESYGYSSEDIVYYWSENQEQIHGLDKLQLAQFTITSYRFTTELM 205
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ G + RLSL F L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITT
Sbjct: 206 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 265
Query: 290 VLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
VLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 266 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 313
>gi|2565319|gb|AAB81966.1| gamma-aminobutyric acid receptor subunit [Lucilia cuprina]
Length = 550
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 144/296 (48%), Positives = 196/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+ D
Sbjct: 56 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFRTDP 115
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 116 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 175
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 176 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSNEVSLPQFKV 235
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 236 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATP 295
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 296 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGACFVMVFASLLEYATVGY 351
>gi|167234236|ref|NP_001107808.1| GABA receptor isoform a precursor [Tribolium castaneum]
gi|156447603|gb|ABU63594.1| GABA-gated anion channel splice variant 3a6a [Tribolium castaneum]
Length = 482
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 145/297 (48%), Positives = 197/297 (66%), Gaps = 6/297 (2%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 36 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 95
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLAF V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 96 RLAFRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSI 155
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV---EEAQLPQFT 219
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W V+ V E +LPQF
Sbjct: 156 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNSG-VKSVGISNEVELPQFR 214
Query: 220 ILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT 279
+LGH L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 215 VLGHRQRATVINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNAT 274
Query: 280 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVALG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 275 PARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 331
>gi|124494581|gb|ABN13426.1| GABA receptor alpha 3 subunit [Plutella xylostella]
Length = 483
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 195/296 (65%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 37 NISAILDSFSISYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 96
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N K S+ H T N+ +R++ GSIT +
Sbjct: 97 RLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNKKQSYFHIATTSNEFIRIHYSGSITRSI 156
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 157 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 216
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 217 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 276
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+ISYVK+ID+YL CFV VFA+ LEYA V Y
Sbjct: 277 ARVSLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASSLEYATVGY 332
>gi|119656392|gb|ABL86443.1| gamma aminobutyric acid receptor alpha 3 subunit [Plutella
xylostella]
Length = 483
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 196/296 (66%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 37 NISAILDSFSISYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 96
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 97 RLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHYSGSITRSI 156
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P V E LPQF +
Sbjct: 157 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 216
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 217 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 276
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV+LG+TTVLTMTT+ + ++LP+IS VK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 277 ARVSLGVTTVLTMTTLMSSTNAALPKISCVKSIDVYLGTCFVMVFASLLEYATVGY 332
>gi|297710654|ref|XP_002831982.1| PREDICTED: glycine receptor subunit alpha-4 [Pongo abelii]
Length = 458
Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 141/286 (49%), Positives = 196/286 (68%), Gaps = 6/286 (2%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RL++ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFSSVTETTMDYRVNVFLRQQWNDPRLSYREYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDR--KE 230
+P+D Q C +++ES+GYT+ D+V W E V+ E LPQF IL E + +
Sbjct: 177 KNFPMDIQTCAMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQF-ILRDEKDLGCCTK 235
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTV 290
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGITTV
Sbjct: 236 HYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTV 295
Query: 291 LTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
LTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 296 LTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 341
>gi|395817720|ref|XP_003782304.1| PREDICTED: glycine receptor subunit alpha-1 [Otolemur garnettii]
Length = 590
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 155/345 (44%), Positives = 211/345 (61%), Gaps = 20/345 (5%)
Query: 11 DFNSENELESQIGN---SDSEKLR---LCHKKSATTERLANVTQTISQLL-------HGY 57
D S E+ +G S E R L K A R A + S L GY
Sbjct: 133 DMGSFEEVNMAVGGGTGSGKEVYRVPSLAASKEAEAARSAPKPMSPSDFLDKLMGRTSGY 192
Query: 58 DIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLT 116
D R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+ L
Sbjct: 193 DARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLD 252
Query: 117 LSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYG--MRFTTTLACMMDL 174
L + IW PD FFAN+K + H++T NKL+ + G SI R T TLAC MDL
Sbjct: 253 LDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLXVYGSSSIQLPSLFRITLTLACPMDL 312
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA-QLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V + LPQF IL E + R +
Sbjct: 313 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKH 371
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV LGITTVL
Sbjct: 372 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 431
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 432 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 476
>gi|444524995|gb|ELV13930.1| Glycine receptor subunit alpha-2 [Tupaia chinensis]
Length = 451
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 140/280 (50%), Positives = 195/280 (69%), Gaps = 11/280 (3%)
Query: 64 NFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFA 122
N+ G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+ L L
Sbjct: 41 NYHGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSML 100
Query: 123 EKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQ 182
+ IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL +P+D Q
Sbjct: 101 DSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQ 160
Query: 183 NCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDRKEKLATGT 236
CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T + TG
Sbjct: 161 TCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT----KHYNTGK 216
Query: 237 YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTI 296
+ + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVLTMTT
Sbjct: 217 FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ 276
Query: 297 STGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 277 SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 316
>gi|291408013|ref|XP_002720405.1| PREDICTED: glycine receptor, alpha 4 subunit-like [Oryctolagus
cuniculus]
Length = 457
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 196/289 (67%), Gaps = 12/289 (4%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++E GYT+ D+V W E V+ E LPQF + LG+ T
Sbjct: 177 KNFPMDIQTCTMQLERVGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 234
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 235 --KYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 292
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 293 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 341
>gi|292620898|ref|XP_002664479.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Danio
rerio]
Length = 471
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/296 (47%), Positives = 204/296 (68%), Gaps = 4/296 (1%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+ + TI +L+ GY+ LRPNF P+ +GM L IAS D+ISE++MDYT T++L Q W+D
Sbjct: 59 SQLQPTIQKLMKGYNRYLRPNFNEGPVEIGMSLDIASIDAISEINMDYTATIFLRQRWRD 118
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F +E L+L G +W+PDTF + K SFLHDVT N+L+R+ +G++ Y +R
Sbjct: 119 SRLIFPG-NESLSLDGRLVSLLWIPDTFIPDSKRSFLHDVTVENRLIRIFSNGTVLYALR 177
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTIL 221
T T+AC MDL YP+D Q CT+++ES+GY + DVV YW V+G++ +L Q+++
Sbjct: 178 ITATIACNMDLTKYPMDRQECTLQLESWGYNLEDVVFYWTRGNDSVKGLDTLRLAQYSVE 237
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
+ T+ K TG Y +L L F L+RN+ +F+ +TY+PS L+V+LSWVSFWI+ + A
Sbjct: 238 SYYTSVTKAVYETGLYPKLILHFALRRNVLFFILETYVPSTLLVVLSWVSFWISQSSVPA 297
Query: 282 RVALGITTVLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +G+TTVLTMTT+ G R+SLP + ++KAID+YL +CF F+F ALLEYA ++
Sbjct: 298 RTCIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFTFIFGALLEYACAHF 353
>gi|391327458|ref|XP_003738217.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-like [Metaseiulus occidentalis]
Length = 514
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/299 (47%), Positives = 196/299 (65%), Gaps = 10/299 (3%)
Query: 48 QTISQLLHG------YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYW 101
Q +S +L YD R+RPN+GG P+ VG+ + I S ++SEV MD+T Y Q W
Sbjct: 4 QNVSNILRSFFESGKYDKRVRPNYGGKPVDVGITMQIISISTVSEVQMDFTSDFYFRQTW 63
Query: 102 KDDRLAFSSEDEV--LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSIT 159
+D+RL+F+ ++ + + + A+KIWVPDTFFAN+K+++ H T N +R+ G I
Sbjct: 64 RDERLSFTRTKDLDSMIVGAEVADKIWVPDTFFANEKSAYFHTATTDNTFLRIKAGGDIL 123
Query: 160 YGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQ 217
+R T T C MDL Y+P+D Q+C +EIES+GYT D+ W E VR + +LPQ
Sbjct: 124 RSIRLTVTATCPMDLRYFPMDRQSCAIEIESFGYTTTDISYKWADGEKSVRISPDVELPQ 183
Query: 218 FTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHE 277
F +LGH+ L+TG Y RL + R +GY++ Q Y+P+ LIV++SWVSFW++
Sbjct: 184 FKVLGHQQKTIVVTLSTGNYSRLVCEIRFGRAMGYYLIQIYIPAGLIVVISWVSFWLHRN 243
Query: 278 ATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AT ARVALG+TTVLTMTT+ + S LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 244 ATPARVALGVTTVLTMTTLMSSTNSQLPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 302
>gi|71991392|ref|NP_001022782.1| Protein UNC-49, isoform b [Caenorhabditis elegans]
gi|5354166|gb|AAD42382.1|AF151640_1 ionotropic GABA receptor subunit UNC-49A [Caenorhabditis elegans]
gi|14530577|emb|CAC42346.1| Protein UNC-49, isoform b [Caenorhabditis elegans]
Length = 487
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/328 (45%), Positives = 212/328 (64%), Gaps = 18/328 (5%)
Query: 37 SATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMY 96
S+ +RL N T YD RLRP +G P+ VG+ + ++S ++SEV MD+T+ Y
Sbjct: 35 SSVLDRLTNRTT--------YDKRLRPRYGEKPVDVGITIHVSSISAVSEVDMDFTLDFY 86
Query: 97 LNQYWKDDRLAFSSED-------EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
+ Q W+D RLAF S D + LT+ D+ +++W PDTFF N+K SF H T N
Sbjct: 87 MRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDRLWKPDTFFPNEKKSFFHLATTHNSF 146
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRG 209
+R+ GDG++ R T T C MDL +P+D+Q+C +EIESYGY++LD++ E
Sbjct: 147 LRIEGDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESYGYSILDIMYVSHEKKSVS 206
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
E +LPQF + + + +KL++G Y RL F +RNIG+++ Q YLPS+LIV++SW
Sbjct: 207 TESYELPQFVLQSIKVVNHTQKLSSGEYSRLCWFFLFKRNIGFYIIQIYLPSVLIVVISW 266
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFW++ +AT ARVALG+TTVLTMTT+ T SS+P++SYVK+IDI+L +CF+ VF +LL
Sbjct: 267 VSFWLSRDATPARVALGVTTVLTMTTLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLL 326
Query: 330 EYAAVNY---SYWADRAKKKPKAKEPTP 354
EYAAV Y RA+K+ + P P
Sbjct: 327 EYAAVGYISKRMKLVRARKESRMLTPLP 354
>gi|308497234|ref|XP_003110804.1| CRE-UNC-49 protein [Caenorhabditis remanei]
gi|308242684|gb|EFO86636.1| CRE-UNC-49 protein [Caenorhabditis remanei]
Length = 794
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/328 (45%), Positives = 212/328 (64%), Gaps = 18/328 (5%)
Query: 37 SATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMY 96
S +RL N T YD RLRP +G P+ VG+ + ++S ++SEV MD+T+ Y
Sbjct: 35 STVLDRLTNRTT--------YDKRLRPRYGEKPVDVGITIHVSSISAVSEVDMDFTLDFY 86
Query: 97 LNQYWKDDRLAFSSED-------EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
+ Q W+D RLAF S D + LT+ D+ +K+W PDTFF N+K SF H T N
Sbjct: 87 MRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDKLWKPDTFFPNEKKSFFHLATTHNSF 146
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRG 209
+R++ DG++ R T T C MDL +P+D+Q+C +EIESYGY++LD+V E
Sbjct: 147 LRIDSDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESYGYSILDIVYVSHEKKSVS 206
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
E +LPQF + + ++ +KL++G Y RL F +RNIG+++ Q YLPS+LIV++SW
Sbjct: 207 TESYELPQFVLQSIKVVNQTQKLSSGEYSRLCWFFLFKRNIGFYIIQIYLPSVLIVVISW 266
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFW++ +AT ARVALG+TTVLTMTT+ T SS+P++SYVK+IDI+L +CF+ VF +LL
Sbjct: 267 VSFWLSRDATPARVALGVTTVLTMTTLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLL 326
Query: 330 EYAAVNY---SYWADRAKKKPKAKEPTP 354
EYAAV Y RA+K+ + P P
Sbjct: 327 EYAAVGYISKRMKLVRARKESRMLTPLP 354
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 105/186 (56%), Gaps = 26/186 (13%)
Query: 192 GYTVLDVVMYWK------ETPVRGVEEAQLPQFTILGHETNDRKEKLATG---------- 235
GY D+ YW ET + QLPQF + N K + ++G
Sbjct: 456 GYQTKDIDYYWGKKRTDLETTAVKFDTFQLPQFQPTLYFVNTTKAETSSGGISICYEDST 515
Query: 236 --------TYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
Y RL+L L RN+G++ +PSILIV +SWVSFW+N EA+ ARV LG+
Sbjct: 516 CSKSQFPGKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVGLGV 575
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SYWADRAKK 345
TTVLTMTT+ T +S+P++SYVK +D++L CFV VFA+LLEYA V+Y R +K
Sbjct: 576 TTVLTMTTLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLLEYAIVSYMNKRLVLRREK 635
Query: 346 KPKAKE 351
+ KA E
Sbjct: 636 RRKAAE 641
>gi|348520330|ref|XP_003447681.1| PREDICTED: glycine receptor subunit alphaZ1-like [Oreochromis
niloticus]
Length = 504
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 207/323 (64%), Gaps = 22/323 (6%)
Query: 35 KKSATTERLANVTQTISQLLHGYDIRLRPNFG-----------------GDPLYVGMDLT 77
+K+A+ + + + GYD R+RPNF G P+ V ++
Sbjct: 70 RKAASPMPPSEFLDKLMGKVSGYDARIRPNFKVWNKDPKGSKNEATHKKGPPVNVTCNIF 129
Query: 78 IASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDK 136
I SF SI+E +MDY + ++L Q W D RLA+S D+ L L + IW PD FFAN+K
Sbjct: 130 INSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEK 189
Query: 137 NSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVL 196
+ H+VT NKL+R++ +G++ Y +R T LAC MDL +P+D Q C +++ES+GYT+
Sbjct: 190 GANFHEVTTDNKLLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMN 249
Query: 197 DVVMYW-KETPVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYF 253
D++ W K+ V+ + LPQF IL E + R + TG + + F L+R +GY+
Sbjct: 250 DLIFEWDKKGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYY 308
Query: 254 VFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAI 313
+ Q Y+PS+LIV+LSWVSFWIN +A ARV LGITTVLTMTT S+G R+SLP++SYVKAI
Sbjct: 309 LIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAI 368
Query: 314 DIYLVMCFVFVFAALLEYAAVNY 336
DI++ +C +FVF+ALLEYAAVN+
Sbjct: 369 DIWMAVCLLFVFSALLEYAAVNF 391
>gi|426246261|ref|XP_004016913.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Ovis aries]
Length = 440
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/303 (49%), Positives = 202/303 (66%), Gaps = 5/303 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F +
Sbjct: 44 LTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWTDQRLVFEG-N 102
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC M
Sbjct: 103 KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNM 162
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T+ +
Sbjct: 163 DLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQQYFTSVTRS 222
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTV 290
+ TG Y RL L F+LQRN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TTV
Sbjct: 223 QQETGNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTV 282
Query: 291 LTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK-KPK 348
L+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K + K
Sbjct: 283 LSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDRGK 342
Query: 349 AKE 351
AKE
Sbjct: 343 AKE 345
>gi|348541123|ref|XP_003458036.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Oreochromis niloticus]
Length = 519
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/291 (48%), Positives = 203/291 (69%), Gaps = 4/291 (1%)
Query: 49 TISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF 108
TI +L+ GY+ LRP F P+ VGM L IAS D+ISE++MDYT T++L Q W D+RL F
Sbjct: 97 TIQRLMKGYNKYLRPFFDNGPVTVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVF 156
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
++ L+L G E +WVPDTF + K SFLHD+T N+L+R+ +G++ Y +R TTT+
Sbjct: 157 EG-NKSLSLDGRLVELLWVPDTFIVDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTV 215
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
AC MDL YP+D Q CT+++ES+GY + DV+ YW V G++ QL Q+T+ H T+
Sbjct: 216 ACNMDLTKYPMDKQTCTLQLESWGYNINDVMFYWTRGNESVSGLDSLQLAQYTVEDHYTS 275
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+ TG Y RL F+L+R+I YF+ +TY+PS L+V+LSWVSFWI+ + AR+ +G
Sbjct: 276 VSEAIYETGHYPRLVFHFELKRSILYFILETYVPSSLLVVLSWVSFWISLSSVPARICIG 335
Query: 287 ITTVLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+TTVLTMTT+ G R+SLP + ++KAID+YL +CF F+F AL+EYA ++
Sbjct: 336 VTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALIEYAVAHF 386
>gi|4336686|gb|AAD17894.1| gamma-aminobutyric-acid receptor rho-1A subunit precursor [Morone
americana]
Length = 476
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 148/305 (48%), Positives = 205/305 (67%), Gaps = 5/305 (1%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG P+ VG+D+ + S D+ISEV MD+T+T+YL YWKD+RL+F S+ ++ +
Sbjct: 78 HDFTMRPAFGGPPIPVGVDVQVESLDTISEVDMDFTMTLYLRHYWKDERLSFPSTNNQSM 137
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T +KIWVPD FF + K SF+HD T N ++R+ DG++ Y +R T T C MDL
Sbjct: 138 TFDSRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVYPDGNVLYSLRVTVTAMCNMDLS 197
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKL 232
+PLD Q C++EIESY YT D+++ WK+ + + L QF I H T
Sbjct: 198 RFPLDTQTCSLEIESYAYTDDDLMLSWKKGNESLNTDDRISLSQFLIQKFHTTTKLAFYS 257
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
+TG Y RL + F L+R +F+ QTY P+ L+VMLSWVSFWI+ A ARV LGITTVLT
Sbjct: 258 STGWYNRLYIHFTLRRTFFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLT 317
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-SYWADRAKKKPKAKE 351
M+TI TGV +S+PR+SY+KA+DIYL + FVFVF +++EYAAVNY S +R ++K + +
Sbjct: 318 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLSTVQERKERKLRERL 377
Query: 352 PTPLG 356
P G
Sbjct: 378 PCTCG 382
>gi|148708799|gb|EDL40746.1| glycine receptor, alpha 2 subunit, isoform CRA_b [Mus musculus]
Length = 407
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 139/277 (50%), Positives = 193/277 (69%), Gaps = 11/277 (3%)
Query: 67 GDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKI 125
G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+ L L + I
Sbjct: 6 GPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSI 65
Query: 126 WVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCT 185
W PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL +P+D Q CT
Sbjct: 66 WKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCT 125
Query: 186 VEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDRKEKLATGTYQR 239
+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T + TG +
Sbjct: 126 MQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT----KHYNTGKFTC 181
Query: 240 LSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTG 299
+ + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVLTMTT S+G
Sbjct: 182 IEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSG 241
Query: 300 VRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 242 SRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 278
>gi|311273938|ref|XP_003134108.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like [Sus
scrofa]
Length = 440
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 153/331 (46%), Positives = 213/331 (64%), Gaps = 13/331 (3%)
Query: 31 RLC------HKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
R+C H +++ +++L+ L GY+ LRPNFGG+P+ + + L IAS SI
Sbjct: 18 RMCIRENQFHVEASRSDKLS--LPGFENLTAGYNKFLRPNFGGEPVQIALTLDIASISSI 75
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
SE +MDYT T+YL Q W D RL F ++ TL E +WVPDT+ K SFLH+VT
Sbjct: 76 SESNMDYTATIYLRQRWTDQRLVFEG-NKSFTLDARLVEFLWVPDTYIVESKKSFLHEVT 134
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW-- 202
N+L+RL +G++ Y +R TTT+AC MDL YP+D Q C +++ES+GY DV W
Sbjct: 135 VGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLR 194
Query: 203 KETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSI 262
VRG+E +L Q+TI + T + + TG Y RL L F+LQRN+ YF+ +TY+PS
Sbjct: 195 GNDSVRGLENLRLAQYTIQQYFTLVTRSQQETGNYTRLVLQFELQRNVLYFILETYVPST 254
Query: 263 LIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCF 321
+V+LSWVSFWI+ ++ AR +G+TTVL+MTT+ G R+SLP + ++KAID+YL +CF
Sbjct: 255 FLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICF 314
Query: 322 VFVFAALLEYAAVNYSYWADRAKK-KPKAKE 351
FVF ALLEYA +YS A K + KAKE
Sbjct: 315 SFVFGALLEYAVAHYSSLQQMAAKDRGKAKE 345
>gi|19881338|gb|AAM00910.1|AF488379_1 glycine receptor alphaZ1L subunit [Danio rerio]
Length = 459
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 143/302 (47%), Positives = 199/302 (65%), Gaps = 20/302 (6%)
Query: 54 LHGYDIRLRPNFG---------------GDPLYVGMDLTIASFDSISEVSMDYTITMYLN 98
+ GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L
Sbjct: 45 VSGYDARIRPNFKVVDPQGSKSDGTHKKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLR 104
Query: 99 QYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGS 157
Q W D RLA+S D+ L L + IW PD FFAN+K + H+VT NKL+R++ +G+
Sbjct: 105 QQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGN 164
Query: 158 ITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLP 216
+ Y +R T LAC MDL +P+D Q C +++ES+GYT+ D++ W E V+ + LP
Sbjct: 165 VLYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLP 224
Query: 217 QFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
QF IL E + R + TG + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWI
Sbjct: 225 QF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWI 283
Query: 275 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
N +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAV
Sbjct: 284 NMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAV 343
Query: 335 NY 336
N+
Sbjct: 344 NF 345
>gi|382928895|gb|AFG29913.1| GABA-gated chloride channel 3, partial [Tetranychus urticae]
Length = 675
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 195/285 (68%), Gaps = 4/285 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV- 114
GYD R+RPN+GG P+ +G+ + I S ++SEV MD+T Y Q+W+D RLAF +
Sbjct: 6 GYDKRVRPNYGGPPVEIGVSMHIISISTVSEVQMDFTSDFYFRQFWEDPRLAFIPLPRIT 65
Query: 115 -LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMD 173
L + + A++IWVPDTFFAN+K++ H T +N +R+ +G + +R T T +C M+
Sbjct: 66 ELYVGAEVADRIWVPDTFFANEKSASFHFATTKNTFLRIGSNGEVFRSIRLTVTASCPME 125
Query: 174 LHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEK 231
L Y+P+D Q C++EIESYGY++ D++ W+E +R + LPQF +LGH +
Sbjct: 126 LQYFPMDRQKCSLEIESYGYSMSDMIYIWREGKKSIRMNSDLSLPQFKVLGHAQKSQANA 185
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVL 291
L+TG Y RL K R++G+++ Q Y+P+ LIV++SWVSFW++ AT ARV+LG+TTVL
Sbjct: 186 LSTGNYSRLICEIKFARSLGFYLIQIYIPASLIVVISWVSFWLHRNATPARVSLGVTTVL 245
Query: 292 TMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TMTT+ + + LP+ISY+K+ID++L CFV VFA+LLEYA V Y
Sbjct: 246 TMTTLMSSTNAQLPKISYIKSIDVFLGTCFVMVFASLLEYATVGY 290
>gi|326673195|ref|XP_691298.4| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like [Danio
rerio]
Length = 518
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 141/291 (48%), Positives = 203/291 (69%), Gaps = 4/291 (1%)
Query: 49 TISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF 108
TI +L+ GY+ LRP F P+ VGM L IAS D+ISE++MDYT T++L Q W D+RL F
Sbjct: 102 TIQKLMKGYNKYLRPFFDNGPVTVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLLF 161
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
++ L+L G E +WVPDTF + K SFLHD+T N+L+R+ +G++ Y +R TTT+
Sbjct: 162 EG-NKSLSLDGRLVELLWVPDTFIVDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTV 220
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
AC MDL YP+D Q CT+++ES+GY V DV+ YW V G++ +L Q+T+ H T+
Sbjct: 221 ACNMDLTKYPMDKQTCTLQLESWGYNVNDVMFYWARGNESVSGLDTLRLAQYTVEDHYTS 280
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+ TG Y +L F+L+R+I YF+ +TY+PS L+V+LSWVSFWI+ + AR+ +G
Sbjct: 281 ASEAVYETGNYPKLIFHFELKRSILYFILETYVPSSLLVVLSWVSFWISQSSVPARICIG 340
Query: 287 ITTVLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+TTVLTMTT+ G R+SLP + ++KAID+YL +CF F+F AL+EYA ++
Sbjct: 341 VTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALIEYAVAHF 391
>gi|355704623|gb|EHH30548.1| Glycine receptor subunit alpha-2, partial [Macaca mulatta]
Length = 385
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 138/277 (49%), Positives = 193/277 (69%), Gaps = 11/277 (3%)
Query: 67 GDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKI 125
G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+ L L + I
Sbjct: 1 GPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSI 60
Query: 126 WVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCT 185
W PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL +P+D Q CT
Sbjct: 61 WKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCT 120
Query: 186 VEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDRKEKLATGTYQR 239
+++ES+GYT+ D++ W + PV+ E LPQF + LG+ T + TG +
Sbjct: 121 MQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT----KHYNTGKFTC 176
Query: 240 LSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTG 299
+ + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVLTMTT S+G
Sbjct: 177 IEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSG 236
Query: 300 VRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 237 SRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 273
>gi|120419440|gb|ABM21539.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [Bos taurus]
Length = 343
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 132/215 (61%), Positives = 168/215 (78%), Gaps = 2/215 (0%)
Query: 139 FLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDV 198
F+H VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+
Sbjct: 1 FVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDI 60
Query: 199 VMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQ 256
YW+ + V GVE +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ Q
Sbjct: 61 EFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQ 120
Query: 257 TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY 316
TY+PSILI +LSWVSFWIN++A++ARVALGITTVLTMTTI+T +R +LP+I YVKAID+Y
Sbjct: 121 TYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMY 180
Query: 317 LVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKE 351
L+ CFVFVF ALLEYA VNY ++ +++ K E
Sbjct: 181 LMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKLAE 215
>gi|432901748|ref|XP_004076927.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Oryzias latipes]
Length = 432
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 142/291 (48%), Positives = 203/291 (69%), Gaps = 4/291 (1%)
Query: 49 TISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF 108
TI +L+ GY+ LRP F P+ VGM L IAS D+ISE++MDYT T++L Q W D+RL F
Sbjct: 10 TIHRLMKGYNKYLRPFFDNGPVTVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVF 69
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
++ L+L G E +WVPDTF + K SFLHD+T N+L+R+ +G++ Y +R TTT+
Sbjct: 70 EG-NKSLSLDGRLVELLWVPDTFIVDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTV 128
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
AC MDL YP+D Q CT+++ES+GY + DV+ YW V G++ QL Q+T+ H T+
Sbjct: 129 ACNMDLTKYPMDKQTCTLQLESWGYNINDVMFYWTRGNESVSGLDTLQLAQYTVEDHYTS 188
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+ TG Y RL F+L+R+I YF+ +TY+PS L+V+LSWVSFWI+ + AR+ +G
Sbjct: 189 VSEAVYETGRYPRLVFHFELKRSILYFILETYVPSSLLVVLSWVSFWISLSSVPARICIG 248
Query: 287 ITTVLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+TTVLTMTT+ G R+SLP + ++KAID+YL +CF F+F AL+EYA ++
Sbjct: 249 VTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALIEYAVAHF 299
>gi|20750081|gb|AAM23269.1| glycine-gated ion channel alpha1 subunit [Morone americana]
Length = 448
Score = 280 bits (716), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 142/302 (47%), Positives = 197/302 (65%), Gaps = 22/302 (7%)
Query: 56 GYDIRLRPNFG-----------------GDPLYVGMDLTIASFDSISEVSMDYTITMYLN 98
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L
Sbjct: 35 GYDARIRPNFKVYNKDPKGSKNEATHKKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLR 94
Query: 99 QYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGS 157
Q W D RLA+S D+ L L + IW PD FFAN+K + H+VT NKL+R++ +G+
Sbjct: 95 QQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGN 154
Query: 158 ITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA-QLP 216
+ Y +R T LAC MDL +P+D Q C +++ES+GYT+ D++ W E V + LP
Sbjct: 155 VLYSIRITLILACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLP 214
Query: 217 QFTILGHETNDRK--EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
QF +L E + R + TG + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWI
Sbjct: 215 QF-LLKEEKDLRHCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWI 273
Query: 275 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
N +A ARV LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAV
Sbjct: 274 NMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAV 333
Query: 335 NY 336
N+
Sbjct: 334 NF 335
>gi|348519036|ref|XP_003447037.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Oreochromis niloticus]
Length = 436
Score = 280 bits (716), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 193/307 (62%), Gaps = 4/307 (1%)
Query: 34 HKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTI 93
++ S T+ L N+T+ + +LL GYD RLRP FGG V D+ + SF +S+V M+YT+
Sbjct: 13 NQHSETSIYLDNITRILDRLLDGYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTM 72
Query: 94 TMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
++ Q W D+RL F E+L L+ KIW PDTFF N K S H++T NKL R+
Sbjct: 73 DVFFRQTWIDERLKFEGPIEILRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIM 132
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA 213
+G+I Y MR T C M L +P+D C ++ SY Y + ++V WK+ P+ VE
Sbjct: 133 QNGTILYTMRLTINAECPMRLMNFPMDGHACPLKFGSYAYPISEIVYTWKKGPLSSVEVP 192
Query: 214 Q----LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
Q L Q+ ++G + + K TG Y +++ F LQR +G+F+ QTY+P I+ V+L+
Sbjct: 193 QESSSLLQYDLIGQTVSSERLKSNTGEYVIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQ 252
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN E+ AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+
Sbjct: 253 VSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 312
Query: 330 EYAAVNY 336
E+AAVNY
Sbjct: 313 EFAAVNY 319
>gi|354495030|ref|XP_003509635.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
1 [Cricetulus griseus]
Length = 453
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 194/318 (61%), Gaps = 6/318 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL RL +G+I Y MR
Sbjct: 91 RLKFRGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEPTPLG 356
+ RA++K + P P+
Sbjct: 331 QSQRAERKAQTTAPPPVA 348
>gi|260835282|ref|XP_002612638.1| hypothetical protein BRAFLDRAFT_219579 [Branchiostoma floridae]
gi|229298016|gb|EEN68647.1| hypothetical protein BRAFLDRAFT_219579 [Branchiostoma floridae]
Length = 390
Score = 280 bits (715), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 138/297 (46%), Positives = 194/297 (65%), Gaps = 4/297 (1%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVL 115
Y+IR + G P+ V D+ + S S+ E +MDY I ++ Q W D RL+F +E L
Sbjct: 6 SYEIRF--SLPGAPVNVTCDIFVQSMGSVKETTMDYIINVFFRQRWNDPRLSFKQFNETL 63
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
TL KIWVPD FF N+K + HDVT N+++R++ G+I Y R T TLAC M+L+
Sbjct: 64 TLDASVVGKIWVPDVFFVNEKGANFHDVTTANRMLRVDPTGTILYSTRLTLTLACPMNLY 123
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDRKEKLAT 234
+P+D Q C +++ESYG T D++++WK T PV +LPQF + TN + T
Sbjct: 124 RFPMDRQQCGLKMESYGKTEADIMLHWKWTRPVEFDASVELPQFYVENIRTNRTVQNYNT 183
Query: 235 GTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 294
G Y RL+ +F LQR +G+++ Q Y+P++LIV+LSWVSFWIN EA ARVALGITTVLTMT
Sbjct: 184 GQYTRLTATFDLQRQMGFYLIQVYIPTMLIVILSWVSFWINIEAAPARVALGITTVLTMT 243
Query: 295 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKE 351
T + + ++SYVKAIDI+L +C +FVFAAL+E+AAVN+ D+ + + KE
Sbjct: 244 TQGSAQGGDV-KVSYVKAIDIWLAVCLLFVFAALIEFAAVNFMSRQDKNRDDRRRKE 299
>gi|348516876|ref|XP_003445963.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Oreochromis niloticus]
Length = 488
Score = 280 bits (715), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 138/291 (47%), Positives = 203/291 (69%), Gaps = 4/291 (1%)
Query: 49 TISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF 108
TI +L+ GY+ LRPNF P+ +GM L IAS D+ISE++MDYT T++L Q W+D RL F
Sbjct: 76 TIQKLMKGYNRYLRPNFNEGPVEIGMSLDIASIDAISEINMDYTATIFLRQRWRDSRLMF 135
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
+E +++ G +W+PDTF + K SFLHDVT N+L+R+ +G++ Y +R T T+
Sbjct: 136 PG-NESVSVDGRLVSLLWIPDTFIPDSKRSFLHDVTVENRLIRIFSNGTVLYALRITATI 194
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHETN 226
AC MDL YP+D Q CT+++ES+GY + DVV YW V+G++ +L Q+++ + T+
Sbjct: 195 ACNMDLTKYPMDRQVCTLQLESWGYNLQDVVFYWTRGNDSVKGLDTLRLAQYSVESYYTS 254
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+ TG Y +L L F L+RN+ +F+ +TY+PSIL+V+LSWVSFWI+ + AR +G
Sbjct: 255 VSEAVYETGNYPKLVLHFALRRNVLFFILETYVPSILLVVLSWVSFWISQSSVPARTCIG 314
Query: 287 ITTVLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+TTVLTMTT+ G R+SLP + ++KAID+YL +CF F+F ALLEYA ++
Sbjct: 315 VTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFTFIFGALLEYACAHF 365
>gi|195174774|ref|XP_002028146.1| GL18208 [Drosophila persimilis]
gi|194116600|gb|EDW38643.1| GL18208 [Drosophila persimilis]
Length = 219
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 132/170 (77%), Positives = 146/170 (85%), Gaps = 13/170 (7%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C +K RL NVTQTIS++L GYDIRLRPNFGGDPL+VGMDLTIASFD+ISEV+MDYT
Sbjct: 29 CKQKDMLAGRLENVTQTISKILQGYDIRLRPNFGGDPLHVGMDLTIASFDAISEVNMDYT 88
Query: 93 ITMYLNQYWKDDRLAFS-------------SEDEVLTLSGDFAEKIWVPDTFFANDKNSF 139
ITMYLNQYW+D+RLAF+ ++VLTLSGDFAEKIWVPDTFFANDKNSF
Sbjct: 89 ITMYLNQYWRDERLAFNIYGPYYNGDADDDGVNDVLTLSGDFAEKIWVPDTFFANDKNSF 148
Query: 140 LHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIE 189
LHDVTERNKLVRL GDG++TYGMRFTTTLACMMDLHYYPLD+QNCTVEIE
Sbjct: 149 LHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIE 198
>gi|410914193|ref|XP_003970572.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Takifugu rubripes]
Length = 450
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/291 (47%), Positives = 201/291 (69%), Gaps = 4/291 (1%)
Query: 49 TISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF 108
TI +L+ GY+ LRPNF P+ +GM L IAS D+ISE++MDYT T++L Q W+D RL F
Sbjct: 38 TIQKLMKGYNRYLRPNFNEGPVEIGMSLDIASIDAISEINMDYTATIFLRQRWRDSRLVF 97
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
+E +++ G +W+PDTF + K SFLHDVT N+L+R+ +G++ Y +R T T+
Sbjct: 98 PG-NESISVDGRLVSLLWIPDTFIPDSKRSFLHDVTVENRLIRIFSNGTVLYALRITATI 156
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHETN 226
AC MDL YP+D Q CT+++ES+GY + DVV YW V+G++ +L Q+++ + T
Sbjct: 157 ACNMDLTKYPMDRQVCTLQLESWGYNLQDVVFYWTRGNDSVKGLDTLRLAQYSVESYHTT 216
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+ TG Y +L L F L+RN+ +F+ +TY+PS L+V+LSWVSFWI+ + AR +G
Sbjct: 217 VSEAVYETGKYPKLVLHFALRRNVLFFILETYVPSTLLVVLSWVSFWISQSSVPARTCIG 276
Query: 287 ITTVLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+TTVLTMTT+ G R+SLP + ++KAID+YL +CF F+F ALLEYA ++
Sbjct: 277 VTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFTFIFGALLEYACAHF 327
>gi|301616665|ref|XP_002937778.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Xenopus (Silurana) tropicalis]
Length = 401
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 192/301 (63%), Gaps = 4/301 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
++ Y+ LRP F P+ + + L +AS D++SE +MDYT T+ L Q W D+RL F +
Sbjct: 10 IMKDYNKYLRPKFNEKPIEIAVSLEVASIDAVSEENMDYTATINLRQRWTDERLVFEG-N 68
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+TL E +WVPDT+ + K SFLHDVT N+LVRL +G++ Y +R TTT+AC M
Sbjct: 69 RSITLDARLVESLWVPDTYIVDSKKSFLHDVTVENRLVRLFANGTVLYAIRITTTVACKM 128
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY+ D+ W VRG++ QL Q+T+ + T +
Sbjct: 129 DLTKYPMDRQTCKLQLESWGYSEKDLTYVWMRANDSVRGMDHLQLAQYTVEQYYTTNSIG 188
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTV 290
K TG Y RL+L F L+RN+ YF+ +TY+PS L+V+LSWVSFWI+ + AR G+TTV
Sbjct: 189 KDETGNYPRLALCFILRRNVVYFILETYIPSALLVVLSWVSFWISMSSVPARTCFGVTTV 248
Query: 291 LTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKA 349
L MTTI G R + P + +KAID+YL +CF FVF ALLEYA +Y + A K K
Sbjct: 249 LAMTTIMMGSRFNFPTANCIIKAIDVYLGICFSFVFGALLEYAFAHYCSELNSAVNKEKI 308
Query: 350 K 350
K
Sbjct: 309 K 309
>gi|351701164|gb|EHB04083.1| Gamma-aminobutyric acid receptor subunit pi [Heterocephalus glaber]
Length = 440
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/319 (47%), Positives = 204/319 (63%), Gaps = 7/319 (2%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F +
Sbjct: 44 LTEGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWTDQRLVFEG-N 102
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC M
Sbjct: 103 KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNM 162
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T +
Sbjct: 163 DLSKYPMDTQTCKLQLESWGYDGNDVEFIWLRGNDSVRGLENLRLAQYTIQRYFTLVTRS 222
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTV 290
+ TG Y RL L F+LQRN+ YF+ +TY+PS +V+LSW+SFWI+ ++ AR +G+TTV
Sbjct: 223 QQETGNYTRLILQFELQRNVLYFILETYVPSTFLVVLSWISFWISLDSVPARTCIGVTTV 282
Query: 291 LTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK---K 346
L+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K K
Sbjct: 283 LSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDRGK 342
Query: 347 PKAKEPTPLGNYIRLCIFS 365
K E + N I I S
Sbjct: 343 VKEAEEVNIANIINSSISS 361
>gi|327267644|ref|XP_003218609.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like [Anolis
carolinensis]
Length = 582
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/301 (46%), Positives = 204/301 (67%), Gaps = 4/301 (1%)
Query: 49 TISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF 108
TI +++ GY+ LRP F P+ VGM + IAS D+ISE++MDYT T++L Q W D+RL F
Sbjct: 178 TIQKIMKGYNKYLRPFFDNGPVSVGMSMDIASIDTISEINMDYTATIFLRQRWTDERLCF 237
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
++ L+L G E +WVPDTF + K SFLHD+T N+L+R+ +G++ Y +R T T+
Sbjct: 238 EG-NKSLSLDGRLVEMLWVPDTFIVDSKKSFLHDITVENRLIRIYPNGTVLYAIRITATV 296
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHETN 226
AC MDL YP+D Q CT+++ES+GY + DV+ YW V G++ +L Q+T+ + T+
Sbjct: 297 ACSMDLTKYPMDKQTCTLQLESWGYNINDVMFYWTRGNDSVSGLDTLRLAQYTVEDYYTS 356
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALG 286
+ TG Y +L F+L+RNI YF+ +TY+PS L+V+LSWVSFWI+ + AR+ +G
Sbjct: 357 ASEAVYETGHYPKLVFHFELKRNILYFILETYVPSSLLVVLSWVSFWISQSSVPARICIG 416
Query: 287 ITTVLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK 345
+TTVLTMTT+ G R+SLP + ++KAID+YL +CF F+F ALLEYA ++ K
Sbjct: 417 VTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALLEYAVAHFCTLNRAGMK 476
Query: 346 K 346
K
Sbjct: 477 K 477
>gi|395840067|ref|XP_003792888.1| PREDICTED: glycine receptor subunit alpha-3 [Otolemur garnettii]
Length = 474
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/277 (49%), Positives = 194/277 (70%), Gaps = 5/277 (1%)
Query: 64 NFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFA 122
+F G P+ V ++ I S SI+E +MDY + ++L Q W D RLA+S D+ L L
Sbjct: 74 SFPGPPVNVTCNIFINSVGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSML 133
Query: 123 EKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQ 182
+ IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL +P+D Q
Sbjct: 134 DSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQ 193
Query: 183 NCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQR 239
C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R + TG +
Sbjct: 194 TCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKHYNTGKFTC 252
Query: 240 LSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTG 299
+ + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVLTMTT S+G
Sbjct: 253 IEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSG 312
Query: 300 VRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 313 SRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 349
>gi|431918134|gb|ELK17362.1| Gamma-aminobutyric acid receptor subunit pi [Pteropus alecto]
Length = 729
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/316 (47%), Positives = 204/316 (64%), Gaps = 7/316 (2%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVL 115
GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F +E +
Sbjct: 336 GYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWTDPRLVFEG-NESV 394
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC MDL
Sbjct: 395 TLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTIACNMDLS 454
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T + +
Sbjct: 455 KYPMDTQTCQLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQRYFTLVTRSQQE 514
Query: 234 TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTM 293
TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TTVL+M
Sbjct: 515 TGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSM 574
Query: 294 TTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKK---PKA 349
TT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K PK
Sbjct: 575 TTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDRGMPKE 634
Query: 350 KEPTPLGNYIRLCIFS 365
E + N I I S
Sbjct: 635 VEEVNITNIINSSISS 650
>gi|260822699|ref|XP_002606739.1| hypothetical protein BRAFLDRAFT_82378 [Branchiostoma floridae]
gi|229292083|gb|EEN62749.1| hypothetical protein BRAFLDRAFT_82378 [Branchiostoma floridae]
Length = 446
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/318 (44%), Positives = 202/318 (63%), Gaps = 12/318 (3%)
Query: 38 ATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYL 97
T++ T I+ LL GYD RLRP++ G+ L VG+ + ++SFD S+ +M+Y +T Y+
Sbjct: 34 GTSQTSITYTNMINSLLKGYDARLRPHYAGEALRVGVTVDVSSFDHFSDTNMEYNLTFYM 93
Query: 98 NQYWKDDRLAFSSE-DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDG 156
+Q+W D RL +S + LTL G + IWVPDT+F N K S H VT N++V +N G
Sbjct: 94 HQHWTDYRLQHTSTLNRNLTLHGANVDVIWVPDTYFVNAKRSLFHTVTTENRVVYINTTG 153
Query: 157 SITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQ 214
+ Y +R + LAC M+ YP+D Q C +++ S+GY+ D+V YW++ + V G +
Sbjct: 154 GVMYILRVSAALACNMNFDTYPMDVQKCELQVGSHGYSAQDLVYYWRDGLSSVEGFSNSY 213
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
LP F+I +R + Y L SF+L R + YF+ T++P ILIV+LSWVSFW+
Sbjct: 214 LPYFSI-----QNRTIVETSDEYSYLYFSFELHRKVAYFMIHTFIPPILIVILSWVSFWV 268
Query: 275 NHEATSARVALGITTVLTMTTI--STGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 332
+H + +ARV LGITTVL+MT I + S LP++SY KAID+YL+ CF+FVFAA LE A
Sbjct: 269 DHRSVAARVTLGITTVLSMTNIIMNDPTTSFLPKVSYSKAIDVYLIWCFMFVFAAFLECA 328
Query: 333 AVNYS--YWADRAKKKPK 348
AV Y+ YW R+K P+
Sbjct: 329 AVTYNCYYWELRSKNPPE 346
>gi|345307468|ref|XP_001505679.2| PREDICTED: glycine receptor subunit alpha-3-like [Ornithorhynchus
anatinus]
Length = 447
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 137/277 (49%), Positives = 194/277 (70%), Gaps = 5/277 (1%)
Query: 64 NFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFA 122
+F G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+ L L
Sbjct: 52 SFSGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSML 111
Query: 123 EKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQ 182
+ IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL +P+D Q
Sbjct: 112 DSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDVQ 171
Query: 183 NCTVEIESYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQR 239
C +++ES+GYT+ D++ W+E PV+ + LPQF +L E + R + TG +
Sbjct: 172 TCIMQLESFGYTMNDLIFEWQEEAPVQVADGLTLPQF-LLKEEKDLRYCTKHYNTGKFTC 230
Query: 240 LSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTG 299
+ + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVLTMTT S+G
Sbjct: 231 IEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSG 290
Query: 300 VRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C VFVF+ALLEYAAVN+
Sbjct: 291 SRASLPKVSYVKAIDIWMAVCLVFVFSALLEYAAVNF 327
>gi|198459451|ref|XP_002136079.1| GA28709 [Drosophila pseudoobscura pseudoobscura]
gi|198140265|gb|EDY71040.1| GA28709 [Drosophila pseudoobscura pseudoobscura]
Length = 196
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/170 (77%), Positives = 146/170 (85%), Gaps = 13/170 (7%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C +K RL NVTQTIS++L GYDIRLRPNFGGDPL+VGMDLTIASFD+ISEV+MDYT
Sbjct: 6 CKQKDMLAGRLENVTQTISKILQGYDIRLRPNFGGDPLHVGMDLTIASFDAISEVNMDYT 65
Query: 93 ITMYLNQYWKDDRLAFS-------------SEDEVLTLSGDFAEKIWVPDTFFANDKNSF 139
ITMYLNQYW+D+RLAF+ ++VLTLSGDFAEKIWVPDTFFANDKNSF
Sbjct: 66 ITMYLNQYWRDERLAFNIYGPYYNGDADDDGVNDVLTLSGDFAEKIWVPDTFFANDKNSF 125
Query: 140 LHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIE 189
LHDVTERNKLVRL GDG++TYGMRFTTTLACMMDLHYYPLD+QNCTVEIE
Sbjct: 126 LHDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIE 175
>gi|198456240|ref|XP_002136347.1| GA22552 [Drosophila pseudoobscura pseudoobscura]
gi|198142702|gb|EDY71425.1| GA22552 [Drosophila pseudoobscura pseudoobscura]
Length = 291
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/141 (93%), Positives = 138/141 (97%)
Query: 200 MYWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYL 259
MYWK TPVRGVE+A+LPQFTI+G+ETNDRKE+LATG YQRLSLSFKLQRNIGYFVFQTYL
Sbjct: 1 MYWKPTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYL 60
Query: 260 PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM 319
PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM
Sbjct: 61 PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM 120
Query: 320 CFVFVFAALLEYAAVNYSYWA 340
CFVFVFAALLEYAAVNY+YW
Sbjct: 121 CFVFVFAALLEYAAVNYTYWG 141
>gi|296192673|ref|XP_002744174.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Callithrix jacchus]
Length = 453
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/317 (42%), Positives = 193/317 (60%), Gaps = 6/317 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NISRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEPTPL 355
+AK+K + P P+
Sbjct: 331 QTQKAKRKAQIASPPPV 347
>gi|403287098|ref|XP_003934794.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Saimiri boliviensis boliviensis]
Length = 453
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/317 (42%), Positives = 193/317 (60%), Gaps = 6/317 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NISRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEPTPL 355
+AK+K + P P+
Sbjct: 331 QTQKAKRKAQLASPPPV 347
>gi|348528651|ref|XP_003451830.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Oreochromis niloticus]
Length = 556
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 205/344 (59%), Gaps = 12/344 (3%)
Query: 30 LRLCHKK-SATT---ERL--ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDS 83
L C KK SA T ER+ N T+ + +LL GYD RLRP FGG V D+ + SF
Sbjct: 27 LLTCMKKISAQTRKDERIYPENFTRILDRLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGP 86
Query: 84 ISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 143
+S+V M+YT+ ++ Q W D RL + E+L L+ K+W PDTFF N K S H++
Sbjct: 87 VSDVEMEYTMDVFFRQMWVDRRLMYEGPIEILRLNNLMVTKVWTPDTFFRNGKRSVAHNM 146
Query: 144 TERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK 203
T N+L R+ +G+I Y MR T + C M L +P+D C ++ SY Y +++ W
Sbjct: 147 TAPNRLFRIMKNGTILYTMRLTISAECPMKLVDFPMDAHACPLKFGSYAYPKTEMIYTWT 206
Query: 204 ETPVRGV----EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYL 259
+ P V E + L Q+ ++G + K TG Y +++ F L+R +GYF+ QTY+
Sbjct: 207 KGPEHSVEVPPESSSLVQYDLIGQTVSSETIKSITGEYVVMTVYFHLKRKMGYFMIQTYI 266
Query: 260 PSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVM 319
P I+ V+LS VSFWIN E+ AR GITTVLTMTT+S R SLP++SY A+D ++ +
Sbjct: 267 PCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAV 326
Query: 320 CFVFVFAALLEYAAVNYSYWA--DRAKKKPKAKEPTPLGNYIRL 361
CF FVF+AL+E+AAVNY A +RAKKKP P P +++
Sbjct: 327 CFAFVFSALIEFAAVNYFTNAQIERAKKKPAKCPPGPQSTPVKV 370
>gi|47227188|emb|CAG00550.1| unnamed protein product [Tetraodon nigroviridis]
Length = 351
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 141/279 (50%), Positives = 190/279 (68%), Gaps = 9/279 (3%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG L VG+D+ + S DSISEV+MD+T+T+YL YW+DDRLAF SS ++
Sbjct: 76 HDFAMRPGFGGSALPVGIDVQVESIDSISEVNMDFTMTLYLRHYWQDDRLAFPSSSNKSR 135
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T +KIWVPD FF + K SF+HD T N ++R+ DG+I Y +R T T C MD
Sbjct: 136 TFDARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILYSVRITVTALCSMDFS 195
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTILGHETNDRKEKLA- 233
+PLD QNC++E+ESY Y D+++YWK +E L QF I E LA
Sbjct: 196 SFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRTDEIVLSQFFI---EDFQPSFGLAF 252
Query: 234 ---TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTV 290
TG Y RL ++F L+R+I +F+ QTY P++L+VMLSWVSFWI+ A ARV+LGITTV
Sbjct: 253 YSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRAVPARVSLGITTV 312
Query: 291 LTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
LTM+TI TGV +S+P++SYVKA+DIYL F+FVF +++
Sbjct: 313 LTMSTIITGVSASMPQVSYVKAVDIYLWASFLFVFLSVI 351
>gi|395528733|ref|XP_003766481.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3-like,
partial [Sarcophilus harrisii]
Length = 388
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 139/296 (46%), Positives = 197/296 (66%), Gaps = 10/296 (3%)
Query: 69 PLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWV 127
P+ VG+D+ I S DSISE+ MD+T+T YL YWKD+RL F S+ ++ +T G +KIWV
Sbjct: 2 PIPVGIDVQIESIDSISEIDMDFTMTFYLRHYWKDERLTFPSTRNKSMTFDGRLIQKIWV 61
Query: 128 PDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVE 187
PD FF + K SF+HD T N ++R+ DG+I + +R T + C MD +PLD QNC++E
Sbjct: 62 PDVFFVHSKRSFIHDTTVENIMLRVYPDGNILFSLRITVSAMCFMDFSRFPLDTQNCSLE 121
Query: 188 IESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEKLA----TGTYQRLS 241
+ESY Y D+++YWK + E L QF I E LA TG Y RL
Sbjct: 122 LESYAYNEEDLMLYWKHGNKSLNTDEHISLSQFFI---EDFSASSGLAFYSSTGWYNRLF 178
Query: 242 LSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVR 301
++F L+R+I +FV Q+Y P++L+VMLSWVSFWI+ A AR++LGITTVLTM+TI TG
Sbjct: 179 INFVLRRHIFFFVLQSYFPAMLMVMLSWVSFWIDRRAVPARLSLGITTVLTMSTIITGAS 238
Query: 302 SSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPTPLGN 357
+S+P++SY+KA+DIYL + F+FVF +++EYAAVNY + K+ K + + + N
Sbjct: 239 ASVPQVSYIKAVDIYLWVSFLFVFLSVIEYAAVNYLTTVEERKQFKKRGKISGIHN 294
>gi|4336690|gb|AAD17896.1| gamma-aminobutyric-acid receptor rho-3 subunit precursor [Morone
americana]
Length = 470
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 155/350 (44%), Positives = 218/350 (62%), Gaps = 13/350 (3%)
Query: 13 NSENELESQIGNSDSEK----LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGD 68
N E IG + +K + L KK +T+ + ++ + ++ +D +RP FGG
Sbjct: 27 NKRRHKELYIGENTKQKHGGRVDLKLKKVDSTKSMLIKSEQLLRI-EDHDFAMRPGFGGS 85
Query: 69 PLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWV 127
+ VG+D+ + S DSISEV+MD+T+T+YL YW+DDR AF SS ++ T KIWV
Sbjct: 86 AIPVGIDVQVESIDSISEVNMDFTMTLYLRHYWQDDRPAFPSSSNKSRTFDARLV-KIWV 144
Query: 128 PDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVE 187
PD FF + K SF+HD T N ++R+ DG+I Y +R T T C MD +PLD QNC++E
Sbjct: 145 PDVFFVHSKRSFIHDTTMENIMLRVYPDGNILYSVRITVTALCSMDFSSFPLDTQNCSLE 204
Query: 188 IESYGYTV----LDVVMYWKETPVRGVEEAQLPQFTILGHETN-DRKEKLATGTYQRLSL 242
+ESY Y L P+R +E L QF + + + +TG Y RL +
Sbjct: 205 LESYAYAYNENDLCSTGRTGTIPLR-TDEIVLSQFFVEDFQPSFGLAFYSSTGWYNRLYI 263
Query: 243 SFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRS 302
+F L+R+I +F+ QTY P++L+VMLSWVSFWI+ A ARV+LGITTVLTM+TI TGV +
Sbjct: 264 NFILRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVSA 323
Query: 303 SLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEP 352
S+P++SYVKA+DIYL F+FVF +++EYAAVNY + KK AK P
Sbjct: 324 SMPQVSYVKAVDIYLWASFLFVFLSVIEYAAVNYFTTVEEMKKLKSAKIP 373
>gi|410949236|ref|XP_003981329.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi isoform 1
[Felis catus]
Length = 470
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 147/303 (48%), Positives = 200/303 (66%), Gaps = 5/303 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F +
Sbjct: 44 LTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWTDQRLVFEG-N 102
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC M
Sbjct: 103 KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNM 162
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T +
Sbjct: 163 DLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQRYFTLVTRS 222
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTV 290
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TTV
Sbjct: 223 QQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTV 282
Query: 291 LTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK-KPK 348
L+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K +
Sbjct: 283 LSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDRGT 342
Query: 349 AKE 351
AKE
Sbjct: 343 AKE 345
>gi|326914205|ref|XP_003203417.1| PREDICTED: glycine receptor subunit alpha-2-like [Meleagris
gallopavo]
Length = 410
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 137/275 (49%), Positives = 191/275 (69%), Gaps = 11/275 (4%)
Query: 69 PLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWV 127
P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+ L L + IW
Sbjct: 28 PVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWK 87
Query: 128 PDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVE 187
PD FFAN+K + HDVT NKL+R++ G + Y +R T TL+C MDL +P+D Q CT++
Sbjct: 88 PDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQ 147
Query: 188 IESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHETNDRKEKLATGTYQRLS 241
+ES+GYT+ D++ W + PV+ E LPQF + LG+ T + TG + +
Sbjct: 148 LESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEDKELGYCT----KHYNTGKFTCIE 203
Query: 242 LSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVR 301
+ F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVALGITTVLTMTT S+G R
Sbjct: 204 VKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSR 263
Query: 302 SSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 264 ASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 298
>gi|1149457|emb|CAA64068.1| neurotransmitter receptor subunit [Carassius auratus]
gi|1589638|prf||2211380B GABA type A receptor:SUBUNIT=alpha6
Length = 438
Score = 276 bits (707), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 135/309 (43%), Positives = 193/309 (62%), Gaps = 4/309 (1%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
L + + T L N+T+ + +LL GYD RLRP FGG V D+ + SF +S+V M+Y
Sbjct: 17 LANPPTETRVYLDNITRILDRLLDGYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEY 76
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+ ++ Q W DDRL F E+L L+ KIW PDTFF N K S H++T NKL R
Sbjct: 77 TMDVFFRQTWIDDRLKFEGPIEILRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFR 136
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE 211
+ +G+I Y MR T C M L +P+D +C ++ SY Y + ++V WK+ P+ VE
Sbjct: 137 IMQNGTILYTMRLTINAECPMRLINFPMDGHSCPLKFGSYAYPMSEIVYTWKKGPLFSVE 196
Query: 212 EAQ----LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
Q L Q+ ++G + + K TG Y +++ F LQR +G+F+ QTY+P I+ V+L
Sbjct: 197 VPQESSSLLQYDLIGQTVSSERLKSNTGEYIVMTVYFHLQRKMGFFLIQTYIPCIMTVIL 256
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
+ VSFWI+ E+ AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+A
Sbjct: 257 AQVSFWIDKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSA 316
Query: 328 LLEYAAVNY 336
L+E+AAVNY
Sbjct: 317 LIEFAAVNY 325
>gi|297711334|ref|XP_002832300.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta, partial
[Pongo abelii]
Length = 571
Score = 276 bits (707), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 123/276 (44%), Positives = 191/276 (69%), Gaps = 2/276 (0%)
Query: 67 GDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIW 126
G P+ V + + + S + ISE++MDYTITM+ +Q WKD RLA+ LTL EK+W
Sbjct: 19 GAPVPVRISIYVTSIEQISEMNMDYTITMFFHQTWKDSRLAYYETTLNLTLDYRMHEKLW 78
Query: 127 VPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTV 186
VPD +F N K++F+HDVT N++ +L+ DG++ YG+R TTT AC +DLH +P+D Q C +
Sbjct: 79 VPDCYFLNSKDAFVHDVTVENRVFQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNL 138
Query: 187 EIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSF 244
+ESYGYTV D++++W + + EE +PQFT LG ++ TG+Y RL L F
Sbjct: 139 VVESYGYTVEDIILFWDDNGNAIHMTEELHIPQFTFLGRTITSKEVYFYTGSYIRLILKF 198
Query: 245 KLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSL 304
++QR + ++ Q Y P++L + SW+SFW+N+++++ARV +G+T++L +TTI + +R L
Sbjct: 199 QVQREVNSYLVQVYWPTVLTTITSWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKL 258
Query: 305 PRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
P IS +KAIDIY+++C FVF +LLEY +NY +++
Sbjct: 259 PNISCIKAIDIYILVCLFFVFLSLLEYVYINYLFYS 294
>gi|395817130|ref|XP_003782028.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Otolemur garnettii]
Length = 453
Score = 276 bits (707), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 135/317 (42%), Positives = 193/317 (60%), Gaps = 6/317 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NISRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVHFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEPTPL 355
+AK+K + TP+
Sbjct: 331 QTQKAKRKAQMAASTPV 347
>gi|351697422|gb|EHB00341.1| Gamma-aminobutyric acid receptor subunit delta [Heterocephalus
glaber]
Length = 438
Score = 276 bits (707), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 142/300 (47%), Positives = 200/300 (66%), Gaps = 15/300 (5%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMD------------LTIASFDSISEVSMDYTITMYLNQY 100
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q
Sbjct: 23 LVEGYARNFRPGSGGPPVNVALAPFLGPPVNVALALEVASIDHISEANMEYTMTVFLHQS 82
Query: 101 WKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITY 160
W+D RL+++ +E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y
Sbjct: 83 WRDSRLSYNHTNETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILY 142
Query: 161 GMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGVEEAQLPQF 218
+R T+T+AC MDL YP+D Q C +++ESYGY+ D+V YW E + G++ QL QF
Sbjct: 143 SIRITSTVACDMDLAKYPMDEQECMLDLESYGYSSEDIVYYWSENQEQIHGLDRLQLAQF 202
Query: 219 TILGHE-TNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHE 277
TI + T + + G + RLSL F L+RN G ++ Q+Y+PS+L+V +SWVSFWI+
Sbjct: 203 TITSYRFTTELMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQA 262
Query: 278 ATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
A ARV+LGITTVLTMTT+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 263 AVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 322
>gi|348574947|ref|XP_003473251.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like [Cavia
porcellus]
Length = 440
Score = 276 bits (707), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 146/304 (48%), Positives = 200/304 (65%), Gaps = 5/304 (1%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F
Sbjct: 43 NLTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWTDQRLVFEG- 101
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
++ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC
Sbjct: 102 NKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACN 161
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
MDL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T +
Sbjct: 162 MDLSKYPMDTQTCKLQLESWGYDGNDVEFIWLRGNDSVRGLENLRLAQYTIQRYFTLVTQ 221
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSW+SFWI+ ++ AR +G+TT
Sbjct: 222 SQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWISFWISLDSVPARTCIGVTT 281
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK-KP 347
VL+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K +
Sbjct: 282 VLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDRG 341
Query: 348 KAKE 351
K KE
Sbjct: 342 KVKE 345
>gi|149052305|gb|EDM04122.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6, isoform
CRA_a [Rattus norvegicus]
Length = 453
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/322 (43%), Positives = 193/322 (59%), Gaps = 13/322 (4%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL RL +G+I Y MR
Sbjct: 91 RLKFKGPAEILSLNNLMVSKIWTPDTFFQNGKKSIAHNMTTPNKLFRLMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY---- 336
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 337 -SYWADR----AKKKPKAKEPT 353
S A+R A K P AK T
Sbjct: 331 QSQKAERQAQTAAKPPVAKSKT 352
>gi|118097240|ref|XP_414507.2| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Gallus
gallus]
Length = 433
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/299 (48%), Positives = 197/299 (65%), Gaps = 4/299 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L GY+ LRP FGG+P+ + M L IAS SISE MDYT T+YL Q W D RL F +
Sbjct: 31 LTMGYNKYLRPYFGGEPVQIAMSLDIASISSISESDMDYTATIYLRQRWTDPRLVFHG-N 89
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ TL E +WVPDT+ K SFLHDVT N+L+RL +G+I Y +R TTT+AC M
Sbjct: 90 KSFTLDARLVELLWVPDTYIVESKRSFLHDVTVGNRLIRLFSNGTILYALRITTTVACNM 149
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY DV+ W V G+E+ +L Q+T+ + T K
Sbjct: 150 DLSKYPMDTQTCRLQLESWGYDENDVIFTWLRGNDSVHGIEKLRLSQYTVERYYTLISKS 209
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTV 290
+ TG+Y RL L F+L+RN+ YF+ +TY+PS L+VMLSWVSFWI ++ AR +G+TTV
Sbjct: 210 QQETGSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTV 269
Query: 291 LTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPK 348
L+MTT+ G RSSL + + ++KAID+YL +CF F+F AL+EYA +YS K P+
Sbjct: 270 LSMTTLMIGSRSSLSKTNCFIKAIDVYLGICFTFIFGALVEYAVAHYSSSQKHTAKTPQ 328
>gi|395817070|ref|XP_003781998.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Otolemur
garnettii]
Length = 440
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/303 (48%), Positives = 200/303 (66%), Gaps = 5/303 (1%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F +
Sbjct: 44 LTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWTDQRLVFEG-N 102
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC M
Sbjct: 103 KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNM 162
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T +
Sbjct: 163 DLSKYPMDTQTCKLQLESWGYDGHDVEYTWLRGNDSVRGLENLRLAQYTIQRYFTLVTRS 222
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTV 290
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TTV
Sbjct: 223 QQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTV 282
Query: 291 LTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK-KPK 348
L+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K +
Sbjct: 283 LSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDRAT 342
Query: 349 AKE 351
AKE
Sbjct: 343 AKE 345
>gi|403290182|ref|XP_003936209.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Saimiri
boliviensis boliviensis]
Length = 519
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/319 (47%), Positives = 204/319 (63%), Gaps = 7/319 (2%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F +
Sbjct: 123 LTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWMDQRLVFEG-N 181
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC M
Sbjct: 182 KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNM 241
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T +
Sbjct: 242 DLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGNDSVRGLEHLRLAQYTIQRYFTLVTRS 301
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTV 290
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TTV
Sbjct: 302 QQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTV 361
Query: 291 LTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKK--- 346
L+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K
Sbjct: 362 LSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDRGT 421
Query: 347 PKAKEPTPLGNYIRLCIFS 365
KA E + N I I S
Sbjct: 422 TKAVEEVSITNIINSSISS 440
>gi|426350886|ref|XP_004042994.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
2 [Gorilla gorilla gorilla]
Length = 449
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 191/314 (60%), Gaps = 6/314 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 27 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 86
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 87 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 146
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 147 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 206
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 207 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 266
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 267 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 326
Query: 339 WADRAKKKPKAKEP 352
+AK+K + P
Sbjct: 327 QTQKAKRKAQIAAP 340
>gi|11177872|ref|NP_068613.1| gamma-aminobutyric acid receptor subunit alpha-6 precursor [Rattus
norvegicus]
gi|232127|sp|P30191.1|GBRA6_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6;
AltName: Full=GABA(A) receptor subunit alpha-6; Flags:
Precursor
gi|204214|gb|AAC42034.1| GABA-A receptor alpha-6 subunit [Rattus norvegicus]
gi|288180|emb|CAA39273.1| GABA-A receptor alpha-6 subunit [Rattus norvegicus]
gi|227076|prf||1613454A GABAa receptor alpha6
Length = 453
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/322 (43%), Positives = 193/322 (59%), Gaps = 13/322 (4%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL RL +G+I Y MR
Sbjct: 91 RLKFKGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMHNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY---- 336
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 337 -SYWADR----AKKKPKAKEPT 353
S A+R A K P AK T
Sbjct: 331 QSQKAERQAQTAAKPPVAKSKT 352
>gi|126331781|ref|XP_001372368.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Monodelphis domestica]
Length = 555
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/325 (41%), Positives = 196/325 (60%), Gaps = 6/325 (1%)
Query: 42 RLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYW 101
R N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W
Sbjct: 44 RPENFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTW 103
Query: 102 KDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYG 161
D RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y
Sbjct: 104 IDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYT 163
Query: 162 MRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQ 217
MR T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q
Sbjct: 164 MRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQ 223
Query: 218 FTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHE 277
+ ++G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E
Sbjct: 224 YDLVGQTVSSETIKSITGEYIVMTVHFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKE 283
Query: 278 ATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY- 336
+ AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 284 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYF 343
Query: 337 -SYWADRAKKKPKAKEPTPLGNYIR 360
+ ++AK+KP + PL ++
Sbjct: 344 TNVQMEKAKRKPSKPQQEPLAPSVQ 368
>gi|109079634|ref|XP_001086065.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Macaca
mulatta]
gi|402873304|ref|XP_003900519.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Papio
anubis]
gi|355691820|gb|EHH27005.1| hypothetical protein EGK_17099 [Macaca mulatta]
gi|355750394|gb|EHH54732.1| hypothetical protein EGM_15624 [Macaca fascicularis]
Length = 453
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 191/314 (60%), Gaps = 6/314 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEP 352
+AK+K + P
Sbjct: 331 QTQKAKRKAQIAAP 344
>gi|426350884|ref|XP_004042993.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
1 [Gorilla gorilla gorilla]
Length = 453
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 191/314 (60%), Gaps = 6/314 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEP 352
+AK+K + P
Sbjct: 331 QTQKAKRKAQIAAP 344
>gi|397473110|ref|XP_003808063.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Pan
paniscus]
Length = 453
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 191/314 (60%), Gaps = 6/314 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEP 352
+AK+K + P
Sbjct: 331 QTQKAKRKAQIAAP 344
>gi|297676573|ref|XP_002816205.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Pongo
abelii]
Length = 453
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 191/314 (60%), Gaps = 6/314 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEP 352
+AK+K + P
Sbjct: 331 QTQKAKRKAQIAAP 344
>gi|114603240|ref|XP_001144345.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
2 [Pan troglodytes]
Length = 453
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 191/314 (60%), Gaps = 6/314 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEP 352
+AK+K + P
Sbjct: 331 QTQKAKRKAQIAAP 344
>gi|301769329|ref|XP_002920081.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-3-like [Ailuropoda melanoleuca]
Length = 468
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/290 (46%), Positives = 197/290 (67%), Gaps = 6/290 (2%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF- 108
QLLH +D +RP FGG P+ VG+D+ + S DSISEV+MD+T+T YL YWKD+RL+F
Sbjct: 63 QLLHIEDHDFAMRPGFGGSPVPVGIDVQVESIDSISEVNMDFTMTFYLRHYWKDERLSFP 122
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S+ ++ +T +KIWVPD FF + K SF+H T N ++ + DG++ + +R T +
Sbjct: 123 STTNKSMTFDHRLIKKIWVPDIFFVHSKRSFIHATTVENIVLCIYPDGNVLFSLRITVSA 182
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
C MD +PLD QNC++E+ESY Y D+++YWK+ + E L QF I +
Sbjct: 183 ICFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKQGNKSLNTDEHISLSQFFIEEFSAS 242
Query: 227 DRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAL 285
+ TG Y RL ++F L+++I +FV QTY P++L+VMLSWVSFWI+ A RV+L
Sbjct: 243 SGFTFYSSTGWYNRLFINFVLRKHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPTRVSL 302
Query: 286 GITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVN 335
GITTVLTM+TI +G+ +S+P++SY+KA+D+YL + +FVF ++EYAAVN
Sbjct: 303 GITTVLTMSTILSGMSASMPQVSYIKAVDVYLWVSSLFVFLXVIEYAAVN 352
>gi|332238943|ref|XP_003268662.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Nomascus leucogenys]
Length = 453
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 191/314 (60%), Gaps = 6/314 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEP 352
+AK+K + P
Sbjct: 331 QTQKAKRKAQIAAP 344
>gi|83779000|gb|ABC47324.1| GABA receptor [Tetranychus urticae]
Length = 585
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/297 (44%), Positives = 191/297 (64%), Gaps = 8/297 (2%)
Query: 63 PNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV--LTLSGD 120
P G P+ VG+ + I + S+SEV MD+T Y Q W+D RL+F + + + + +
Sbjct: 63 PIMVGPPVKVGVTMHILTISSVSEVQMDFTADFYFRQLWRDSRLSFKARHGISQILVDAE 122
Query: 121 FAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLD 180
A+KIWVPDTFFAN+K ++ H+ T +N +R++ DG + +R T T +C M+L Y+P+D
Sbjct: 123 VADKIWVPDTFFANEKQAYFHEATTKNTFLRISHDGQVLRSIRLTVTASCPMNLQYFPMD 182
Query: 181 NQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQR 239
Q C +EIESYGY++ D++ W E V+ LPQF+I + + L TG Y R
Sbjct: 183 RQKCNIEIESYGYSMTDIIYNWVDENAVKIDSNLMLPQFSIASIRQSWKYISLTTGNYSR 242
Query: 240 LSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTG 299
L +L R++GY++ Q Y+P+ LIV++SWVSFW++ AT ARV LG+ TVLTMTT+ +
Sbjct: 243 LMCEIQLTRSMGYYMIQIYVPASLIVIISWVSFWLHRNATPARVHLGVITVLTMTTLMSS 302
Query: 300 VRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY-----SYWADRAKKKPKAKE 351
S LP+ISYVK+ID++L CFV VFAALLEYAAV Y S +R ++ KA E
Sbjct: 303 TNSQLPKISYVKSIDVFLGTCFVMVFAALLEYAAVGYIGKRISMRKNRFQQLAKAAE 359
>gi|1470364|gb|AAB36480.1| gamma-aminobutyric acid type A receptor alpha 6 subunit [Homo
sapiens]
Length = 453
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/314 (43%), Positives = 189/314 (60%), Gaps = 4/314 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 341 DRAKKKPKAKEPTP 354
K K KA+ P
Sbjct: 331 QTQKAKRKAQFAAP 344
>gi|157389018|ref|NP_000802.2| gamma-aminobutyric acid receptor subunit alpha-6 precursor [Homo
sapiens]
gi|126302548|sp|Q16445.2|GBRA6_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6;
AltName: Full=GABA(A) receptor subunit alpha-6; Flags:
Precursor
gi|64654354|gb|AAH96242.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|64654801|gb|AAH96241.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|68563331|gb|AAH99641.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|68563375|gb|AAH99640.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|119581946|gb|EAW61542.1| gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Homo sapiens]
gi|158259945|dbj|BAF82150.1| unnamed protein product [Homo sapiens]
Length = 453
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 191/314 (60%), Gaps = 6/314 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEP 352
+AK+K + P
Sbjct: 331 QTQKAKRKAQFAAP 344
>gi|382928893|gb|AFG29912.1| GABA-gated chloride channel 2, partial [Tetranychus urticae]
Length = 496
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 141/307 (45%), Positives = 199/307 (64%), Gaps = 13/307 (4%)
Query: 41 ERLANVTQTISQLLH-----GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITM 95
E+ + Q I+++L+ GYD R+RPN+GG P+ VG+ + S S+SEV MD+T
Sbjct: 8 EKGNALGQNITKILNAFFSSGYDKRVRPNYGGPPVEVGISVYFTSISSVSEVKMDFTSDF 67
Query: 96 YLNQYWKDDRLAFSSEDEV--LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
Y Q WKD RL+F + L + + A+KIWVPDTFFAN+K ++ H T N+ +R+
Sbjct: 68 YFRQEWKDPRLSFDPLPGISNLYVGAEVAKKIWVPDTFFANEKQAYFHVATTPNRFLRIA 127
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW----KETPVRG 209
G I +R T T +C M L Y+P+D Q C++EIESYGY++ D+ W K V+G
Sbjct: 128 FSGLIYQSIRLTVTASCPMSLQYFPMDRQACSIEIESYGYSMRDIKYVWLNGNKSVDVQG 187
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
+ LPQF I+GHE L TG Y RL K R++G+++ Q Y+P+ LIV++SW
Sbjct: 188 --DVTLPQFKIMGHEQESAIAALTTGNYSRLICKIKFSRSLGFYLIQIYIPASLIVVISW 245
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFW++ AT ARV+LG+TTVLTMTT+ + + LP+ISY+K+ID++L CFV VFA+LL
Sbjct: 246 VSFWLHRNATPARVSLGVTTVLTMTTLMSSTNAQLPKISYIKSIDVFLGTCFVMVFASLL 305
Query: 330 EYAAVNY 336
EYA V Y
Sbjct: 306 EYATVGY 312
>gi|410913345|ref|XP_003970149.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Takifugu rubripes]
Length = 556
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 196/321 (61%), Gaps = 8/321 (2%)
Query: 36 KSATTERL--ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTI 93
++ T ER+ N T+ + QLL GYD RLRP FGG V D+ + SF +S+V M+YT+
Sbjct: 37 QTKTDERIYPENFTRILDQLLDGYDSRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTM 96
Query: 94 TMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
++ Q W D RL + + E+L L+ K+W PDTFF N K S H++T NKL R+
Sbjct: 97 DVFFRQTWVDRRLMYEGQVEILRLNNLMVTKVWTPDTFFRNGKKSVAHNMTAPNKLFRIM 156
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV--- 210
+G+I Y MR T + C M L +P+D C ++ SY Y +++ W + P V
Sbjct: 157 KNGTILYTMRLTISAECPMKLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPQHSVEVP 216
Query: 211 -EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
E + L Q+ ++G + + TG Y +++ F L+R +GYF+ QTY+P I+ V+LS
Sbjct: 217 PESSSLVQYDLIGQTVSSETIQSITGEYVVMTVYFHLKRKLGYFLIQTYIPCIMTVILSQ 276
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN E+ AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+
Sbjct: 277 VSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 336
Query: 330 EYAAVNYSYWADRAKKKPKAK 350
E+AAVN Y+ D K+PK K
Sbjct: 337 EFAAVN--YFTDEQIKRPKGK 355
>gi|432880405|ref|XP_004073681.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Oryzias latipes]
Length = 570
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/323 (42%), Positives = 193/323 (59%), Gaps = 6/323 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + +LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 48 NFTRILDRLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQMWIDR 107
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 108 RLMYEGPMEILRLNNLMVTKVWTPDTFFRNGKRSVAHNMTAPNKLFRIMKNGTILYTMRL 167
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ W + P V E + L Q+ +
Sbjct: 168 TIIAQCPMKLVDFPMDAHACPLKFGSYAYPKTEMIYTWTKGPEHSVEVPPESSSLVQYDL 227
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 228 TGQTVSSETIKSITGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 287
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY A
Sbjct: 288 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNA 347
Query: 341 --DRAKKKPKAKEPTPLGNYIRL 361
+RAKKKP P P +++
Sbjct: 348 QIERAKKKPAKCPPGPQTTPVKV 370
>gi|326677934|ref|XP_002667403.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Danio
rerio]
Length = 442
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/298 (44%), Positives = 189/298 (63%), Gaps = 4/298 (1%)
Query: 43 LANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWK 102
L N+T+ + +LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W
Sbjct: 28 LDNITRILDRLLDGYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWI 87
Query: 103 DDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
DDRL F E+L L+ KIW PDTFF N K S H++T NKL R+ +G+I Y M
Sbjct: 88 DDRLKFEGPIEILRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTM 147
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQF 218
R T C M L +P+D +C ++ SY Y + ++V WK+ P+ VE Q L Q+
Sbjct: 148 RLTINAECPMRLINFPMDGHSCPLKFGSYAYPMSEIVYTWKKGPLFSVEVPQESSSLLQY 207
Query: 219 TILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEA 278
++G + + K TG Y +++ F LQR +G+F+ QTY+P I+ V+L+ VSFWI+ E+
Sbjct: 208 DLIGQTVSSERLKSNTGEYIVMTVYFHLQRKMGFFLIQTYIPCIMTVILAQVSFWIDKES 267
Query: 279 TSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 268 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 325
>gi|348575239|ref|XP_003473397.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
isoform 1 [Cavia porcellus]
Length = 453
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 192/316 (60%), Gaps = 6/316 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFVGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVHFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEPTP 354
R+K+K + +P
Sbjct: 331 QIQRSKRKTQIAATSP 346
>gi|5813764|gb|AAD52002.1| GABAA receptor alpha 6 subunit [Mus musculus]
Length = 452
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 134/319 (42%), Positives = 193/319 (60%), Gaps = 6/319 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 30 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 89
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL RL +G+I Y MR
Sbjct: 90 RLKFKGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTMRL 149
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 150 TINADCPMRLVNFPMDGHACPLKFGSYAYPKTEIIYTWKKGPLYSVEVPEESSSLLQYDL 209
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 210 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 269
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 270 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 329
Query: 339 WADRAKKKPKAKEPTPLGN 357
+ +A+++ + P+
Sbjct: 330 QSQKAERQAQTAATPPVAK 348
>gi|449267232|gb|EMC78198.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Columba livia]
Length = 465
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/296 (44%), Positives = 184/296 (62%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+T+ + +LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NITRILDKLLDGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL FS E+L L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFSGPTEILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ VE Q L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLHSVEVPQESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 326
>gi|291387808|ref|XP_002710421.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, pi
[Oryctolagus cuniculus]
Length = 440
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/297 (48%), Positives = 196/297 (65%), Gaps = 4/297 (1%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F
Sbjct: 43 NLTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWADQRLVFEG- 101
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
++ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC
Sbjct: 102 NKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACN 161
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
MDL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T +
Sbjct: 162 MDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGNDSVRGLENLRLAQYTIQRYFTLVTR 221
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TT
Sbjct: 222 SQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTT 281
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK 345
VL+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K
Sbjct: 282 VLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAK 338
>gi|334311447|ref|XP_001380372.2| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Monodelphis
domestica]
Length = 441
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/304 (48%), Positives = 199/304 (65%), Gaps = 5/304 (1%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRPNFGG P+ + + L IAS SISE +MDYT T+YL Q W D RL F
Sbjct: 44 NLTEGYNKFLRPNFGGKPVVIALTLDIASISSISESNMDYTATIYLRQRWSDQRLVFDG- 102
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
++ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC
Sbjct: 103 NKSFTLDARLVEFLWVPDTYIVESKTSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACN 162
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
MDL YP+D Q C +++ES+GY DV W VRG+E +L Q+T+ + T K
Sbjct: 163 MDLSKYPMDTQTCKLQLESWGYDGNDVEFMWLRGNDSVRGLENLRLAQYTVQRYFTLVTK 222
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TT
Sbjct: 223 SQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVILSWVSFWISLDSVPARTCIGVTT 282
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD-RAKKKP 347
VL+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS AK +
Sbjct: 283 VLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQKLAAKDRG 342
Query: 348 KAKE 351
+KE
Sbjct: 343 TSKE 346
>gi|426230034|ref|XP_004009088.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Ovis
aries]
Length = 453
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 134/317 (42%), Positives = 192/317 (60%), Gaps = 6/317 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NISRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMKLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEPTPL 355
+AK+K + P+
Sbjct: 331 QTQKAKRKAQIAASPPV 347
>gi|402873378|ref|XP_003900554.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Papio
anubis]
Length = 440
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/333 (45%), Positives = 207/333 (62%), Gaps = 21/333 (6%)
Query: 16 NELESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMD 75
N+L ++G SD KL L L GY+ LRPNFGG+P+ + +
Sbjct: 24 NQLNVEVGRSD--KLSL---------------PGFENLTAGYNKFLRPNFGGEPVQIALT 66
Query: 76 LTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFAND 135
L IAS SISE +MDYT T+YL Q W D RL F ++ TL E +WVPDT+
Sbjct: 67 LDIASISSISESNMDYTATIYLRQRWMDQRLVFEG-NKSFTLDARLVEFLWVPDTYIVES 125
Query: 136 KNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTV 195
K SFLH+VT N+L+RL +G++ Y +R TTT+AC MDL YP+D Q C +++ES+GY
Sbjct: 126 KKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDG 185
Query: 196 LDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYF 253
DV W VRG+E +L Q+TI + T + + TG Y RL L F+L+RN+ YF
Sbjct: 186 NDVEFTWLRGNDSVRGLEHLRLAQYTIERYFTLVTRSQQETGNYTRLILQFELRRNVLYF 245
Query: 254 VFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS-YVKA 312
+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TTVL+MTT+ G R+SLP + ++KA
Sbjct: 246 ILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKA 305
Query: 313 IDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK 345
ID+YL +CF FVF ALLEYA +YS A K
Sbjct: 306 IDVYLGICFSFVFGALLEYAVAHYSSLQQMAAK 338
>gi|301775017|ref|XP_002922932.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Ailuropoda melanoleuca]
gi|281339592|gb|EFB15176.1| hypothetical protein PANDA_011970 [Ailuropoda melanoleuca]
Length = 440
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/304 (48%), Positives = 200/304 (65%), Gaps = 5/304 (1%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F
Sbjct: 43 NLTAGYNKFLRPNFGGEPVKIALSLDIASISSISESNMDYTATIYLRQRWTDQRLVFEG- 101
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
++ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC
Sbjct: 102 NKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACN 161
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
MDL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T +
Sbjct: 162 MDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQRYFTLVTR 221
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TT
Sbjct: 222 SRQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTT 281
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK-KP 347
VL+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K +
Sbjct: 282 VLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDRG 341
Query: 348 KAKE 351
AKE
Sbjct: 342 TAKE 345
>gi|224068165|ref|XP_002193341.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Taeniopygia guttata]
Length = 465
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/296 (44%), Positives = 184/296 (62%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+T+ + +LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NITRILDKLLDGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL FS E+L L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFSGPTEILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ VE Q L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLHSVEVPQESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 326
>gi|153792343|ref|NP_001093111.1| gamma-aminobutyric acid receptor subunit alpha-6 isoform 1
precursor [Mus musculus]
gi|341941084|sp|P16305.3|GBRA6_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6;
AltName: Full=GABA(A) receptor subunit alpha-6; Flags:
Precursor
gi|74149350|dbj|BAE22438.1| unnamed protein product [Mus musculus]
gi|148877527|gb|AAI45703.1| Gabra6 protein [Mus musculus]
gi|219519815|gb|AAI45159.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6 [Mus
musculus]
Length = 453
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/319 (42%), Positives = 193/319 (60%), Gaps = 6/319 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL RL +G+I Y MR
Sbjct: 91 RLKFKGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKTEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEPTPLGN 357
+ +A+++ + P+
Sbjct: 331 QSQKAERQAQTAATPPVAK 349
>gi|11055259|gb|AAG28024.1|AF256197_1 GABA-A receptor alpha-6 subunit protein long splice variant [Mus
musculus]
gi|11055261|gb|AAG28025.1|AF256198_1 GABA-A receptor alpha-6 subunit protein long splice variant [Mus
musculus]
gi|5813766|gb|AAD52004.1| GABAA receptor alpha 6 subunit [Mus musculus]
gi|148700395|gb|EDL32342.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 6, isoform
CRA_a [Mus musculus]
Length = 453
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/319 (42%), Positives = 193/319 (60%), Gaps = 6/319 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL RL +G+I Y MR
Sbjct: 91 RLKFKGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKTEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEPTPLGN 357
+ +A+++ + P+
Sbjct: 331 QSQKAERQAQTAATPPVAK 349
>gi|221136860|ref|NP_001137557.1| gamma-aminobutyric acid receptor subunit alpha-6 [Bos taurus]
gi|296485091|tpg|DAA27206.1| TPA: gamma-aminobutyric acid (GABA) A receptor, alpha 6 [Bos
taurus]
gi|440913395|gb|ELR62848.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Bos grunniens
mutus]
Length = 453
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/317 (42%), Positives = 192/317 (60%), Gaps = 6/317 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NISRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMKLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEPTPL 355
+AK+K + P+
Sbjct: 331 QTQKAKRKAQIAASPPV 347
>gi|109079726|ref|XP_001093483.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi isoform 3
[Macaca mulatta]
gi|355691837|gb|EHH27022.1| hypothetical protein EGK_17122 [Macaca mulatta]
gi|355750415|gb|EHH54753.1| hypothetical protein EGM_15649 [Macaca fascicularis]
Length = 440
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/333 (45%), Positives = 207/333 (62%), Gaps = 21/333 (6%)
Query: 16 NELESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMD 75
N+L ++G SD KL L L GY+ LRPNFGG+P+ + +
Sbjct: 24 NQLNVEVGRSD--KLSL---------------PGFENLTAGYNKFLRPNFGGEPVQIALT 66
Query: 76 LTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFAND 135
L IAS SISE +MDYT T+YL Q W D RL F ++ TL E +WVPDT+
Sbjct: 67 LDIASISSISESNMDYTATIYLRQRWMDQRLVFEG-NKSFTLDARLVEFLWVPDTYIVES 125
Query: 136 KNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTV 195
K SFLH+VT N+L+RL +G++ Y +R TTT+AC MDL YP+D Q C +++ES+GY
Sbjct: 126 KKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDG 185
Query: 196 LDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYF 253
DV W VRG+E +L Q+TI + T + + TG Y RL L F+L+RN+ YF
Sbjct: 186 NDVEFTWLRGNDSVRGLEHLRLAQYTIERYFTLVTRSQQETGNYTRLILQFELRRNVLYF 245
Query: 254 VFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRIS-YVKA 312
+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TTVL+MTT+ G R+SLP + ++KA
Sbjct: 246 ILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKA 305
Query: 313 IDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK 345
ID+YL +CF FVF ALLEYA +YS A K
Sbjct: 306 IDVYLGICFSFVFGALLEYAVAHYSSLQQMAAK 338
>gi|326923782|ref|XP_003208113.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Meleagris gallopavo]
Length = 457
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 198/286 (69%), Gaps = 9/286 (3%)
Query: 69 PLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVP 128
P+ VGM L IAS D+ISE++MDYT T++L Q W D+RL F ++ L+L G E +WVP
Sbjct: 72 PVSVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLCFDG-NKSLSLDGRLVEMLWVP 130
Query: 129 DTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEI 188
DTF + K SFLHD+T N+L+R+ +G++ Y +R TTT+AC MDL YP+D Q CT+++
Sbjct: 131 DTFIVDSKKSFLHDITVENRLIRIYPNGTVLYAIRITTTVACSMDLTKYPMDKQTCTLQL 190
Query: 189 ESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKL 246
ES+GY + DV+ YW VRG++ QL Q+T+ H T+ + TG Y +L F+L
Sbjct: 191 ESWGYNINDVMFYWTRGNDSVRGLDTLQLAQYTVEDHFTSVSEAVYETGRYPKLVFHFEL 250
Query: 247 QRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPR 306
+RNI YF+ +TY+PSIL+V+LSWVSFWI+ + AR+ +G+TTVLTMTT+ G R+SLP
Sbjct: 251 KRNILYFILETYVPSILLVVLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPN 310
Query: 307 IS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKE 351
+ ++KAID+YL +CF F+F ALLEYA ++ +P +KE
Sbjct: 311 ANCFIKAIDVYLGICFSFIFGALLEYAVAHFC-----TLHRPSSKE 351
>gi|80475030|gb|AAI09107.1| Gamma-aminobutyric acid (GABA) A receptor, pi [Homo sapiens]
gi|80478944|gb|AAI09106.1| Gamma-aminobutyric acid (GABA) A receptor, pi [Homo sapiens]
Length = 440
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/297 (48%), Positives = 196/297 (65%), Gaps = 4/297 (1%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F
Sbjct: 43 NLTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWMDQRLVFEG- 101
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
++ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC
Sbjct: 102 NKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACN 161
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
MDL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T +
Sbjct: 162 MDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGNDSVRGLEHLRLAQYTIERYFTLVTR 221
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TT
Sbjct: 222 SQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTT 281
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK 345
VL+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K
Sbjct: 282 VLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAK 338
>gi|291387763|ref|XP_002710401.1| PREDICTED: gamma-aminobutyric acid A receptor, alpha 4 [Oryctolagus
cuniculus]
Length = 453
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 188/310 (60%), Gaps = 4/310 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NISRILDSLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNV 330
Query: 341 DRAKKKPKAK 350
K K KA+
Sbjct: 331 QTQKAKRKAQ 340
>gi|355557459|gb|EHH14239.1| hypothetical protein EGK_00127 [Macaca mulatta]
Length = 475
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 146/333 (43%), Positives = 204/333 (61%), Gaps = 48/333 (14%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 23 LIAGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 82
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 83 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 142
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGH----ETN 226
DL YP+D Q C +E+ESYGY+ D+V YW E+ + G+++ QL QFTI + E
Sbjct: 143 DLAKYPMDEQECMLELESYGYSSEDIVYYWSESQEHIHGLDKLQLAQFTITSYRFTTELM 202
Query: 227 DRKEKL------------------------------------------ATGTYQRLSLSF 244
+ K L A G + RLSL F
Sbjct: 203 NFKSALQVYRKREGVGSSLSPSCQALPPLSPTVGLGWAGTGALTVAVPAAGQFPRLSLHF 262
Query: 245 KLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSL 304
L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+LGITTVLTMTT+ RSSL
Sbjct: 263 HLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITTVLTMTTLMVSARSSL 322
Query: 305 PRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
PR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 323 PRASAIKALDVYFWICYVFVFAALVEYAFAHFN 355
>gi|332248250|ref|XP_003273278.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Nomascus
leucogenys]
Length = 440
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 144/297 (48%), Positives = 196/297 (65%), Gaps = 4/297 (1%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F
Sbjct: 43 NLTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWMDQRLVFEG- 101
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
++ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC
Sbjct: 102 NKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACN 161
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
MDL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T +
Sbjct: 162 MDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGNDSVRGLEHLRLAQYTIERYFTLVTR 221
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TT
Sbjct: 222 SQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTT 281
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK 345
VL+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K
Sbjct: 282 VLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAK 338
>gi|332822676|ref|XP_001150902.2| PREDICTED: gamma-aminobutyric acid receptor subunit pi isoform 1
[Pan troglodytes]
gi|397479327|ref|XP_003810975.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Pan
paniscus]
gi|426350963|ref|XP_004043030.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Gorilla
gorilla gorilla]
Length = 440
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 144/297 (48%), Positives = 196/297 (65%), Gaps = 4/297 (1%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F
Sbjct: 43 NLTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWMDQRLVFEG- 101
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
++ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC
Sbjct: 102 NKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACN 161
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
MDL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T +
Sbjct: 162 MDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGNDSVRGLEHLRLAQYTIERYFTLVTR 221
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TT
Sbjct: 222 SQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTT 281
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK 345
VL+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K
Sbjct: 282 VLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAK 338
>gi|118090514|ref|XP_420724.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
2 [Gallus gallus]
Length = 554
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/308 (43%), Positives = 190/308 (61%), Gaps = 6/308 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T ++ LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 46 NFTSILNSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDK 105
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 106 RLKYDGPIEILRLNNLMVSKVWTPDTFFRNGKKSVAHNMTAPNKLFRIMRNGTILYTMRL 165
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 166 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPEESSSLVQYDL 225
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 226 LGHTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 285
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 286 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 345
Query: 339 WADRAKKK 346
+RAK+K
Sbjct: 346 QMERAKRK 353
>gi|7657106|ref|NP_055026.1| gamma-aminobutyric acid receptor subunit pi precursor [Homo
sapiens]
gi|6016089|sp|O00591.1|GBRP_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit pi; AltName:
Full=GABA(A) receptor subunit pi; Flags: Precursor
gi|2197001|gb|AAC51357.1| GABA-A receptor pi subunit [Homo sapiens]
gi|3252852|gb|AAC24194.1| GABA-A receptor pi subunit [Homo sapiens]
gi|50959884|gb|AAH74810.1| Gamma-aminobutyric acid (GABA) A receptor, pi [Homo sapiens]
gi|50960321|gb|AAH74865.1| Gamma-aminobutyric acid (GABA) A receptor, pi [Homo sapiens]
gi|119581871|gb|EAW61467.1| gamma-aminobutyric acid (GABA) A receptor, pi, isoform CRA_b [Homo
sapiens]
gi|119581872|gb|EAW61468.1| gamma-aminobutyric acid (GABA) A receptor, pi, isoform CRA_b [Homo
sapiens]
gi|158259263|dbj|BAF85590.1| unnamed protein product [Homo sapiens]
Length = 440
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 144/297 (48%), Positives = 196/297 (65%), Gaps = 4/297 (1%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F
Sbjct: 43 NLTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWMDQRLVFEG- 101
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
++ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC
Sbjct: 102 NKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACN 161
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
MDL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T +
Sbjct: 162 MDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGNDSVRGLEHLRLAQYTIERYFTLVTR 221
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TT
Sbjct: 222 SQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTT 281
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK 345
VL+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K
Sbjct: 282 VLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAK 338
>gi|47211172|emb|CAF91158.1| unnamed protein product [Tetraodon nigroviridis]
Length = 514
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 194/321 (60%), Gaps = 8/321 (2%)
Query: 36 KSATTERL--ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTI 93
++ + ER+ N T + QLL GYD RLRP FGG V D+ + SF +S+V M+YT+
Sbjct: 2 QTKSDERIYPENFTHILDQLLDGYDNRLRPGFGGRVTEVKTDIYVTSFGPVSDVEMEYTM 61
Query: 94 TMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
++ Q W D RL + E+L L+ K+W PDTFF N K S H++T NKL R+
Sbjct: 62 DVFFRQTWVDRRLMYEGPVEILRLNNLMVTKVWTPDTFFRNGKKSVAHNMTAPNKLFRIM 121
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV--- 210
+G+I Y MR T + C M L +P+D C ++ SY Y +++ W + P V
Sbjct: 122 KNGTILYTMRLTISAECPMKLVDFPMDRHACPLKFGSYAYPKTEMIYTWTKGPQHSVEVP 181
Query: 211 -EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
E + L Q+ ++G + + TG Y +++ F L+R IGYF+ QTY+P I+ V+LS
Sbjct: 182 PESSSLVQYDLIGQTVSSETIQSITGEYVVMTVYFHLKRKIGYFLIQTYIPCIMTVILSQ 241
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN E+ AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+
Sbjct: 242 VSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 301
Query: 330 EYAAVNYSYWADRAKKKPKAK 350
E+AAVN Y+ D K+PK K
Sbjct: 302 EFAAVN--YFTDEQIKRPKGK 320
>gi|312082830|ref|XP_003143607.1| hypothetical protein LOAG_08027 [Loa loa]
Length = 1340
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 145/335 (43%), Positives = 216/335 (64%), Gaps = 19/335 (5%)
Query: 47 TQTISQLL------HGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQY 100
T+ IS++L + YD RLRP G +P+ VG+ L ++S +ISEV MD+TI YL Q
Sbjct: 6 TRKISEILDVLIDNNTYDRRLRPKHGEEPVNVGITLHVSSVSAISEVDMDFTIDFYLRQT 65
Query: 101 WKDDRLAFSS------EDEV--LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
W D RLAFS E+ + LT+ D+ +K+W PDTFF N+K S+ H T N +R+
Sbjct: 66 WNDPRLAFSHYLYGIFENNIDSLTVGVDYLQKLWKPDTFFPNEKRSYFHVTTTHNSFLRI 125
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGV 210
+G++ R T T C M+L +P+D+Q C +EIESYGY+VLD+V ++ + PV
Sbjct: 126 YPNGNVFTSQRLTVTAICNMELQLFPMDSQKCKLEIESYGYSVLDIVYFFNNSKNPV-SK 184
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF ++ + R L +G Y RL+ +F +RNIG+++ Q YLPSILIV++SWV
Sbjct: 185 SEFELPQFVLIDIQVASRNVALVSGNYSRLTCTFLFKRNIGFYIIQVYLPSILIVIISWV 244
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFW+N +AT ARVAL + T+LTMTT++ +S+P++SYVK+IDI+L + F+ VF++LLE
Sbjct: 245 SFWLNRDATPARVALSVLTILTMTTLTATTNASMPKVSYVKSIDIFLGVSFIMVFSSLLE 304
Query: 331 YAAVNYSYWADRAKKKPKAKEPTPLGNYIRLCIFS 365
+AAV Y + R K + + L + + C ++
Sbjct: 305 FAAV--GYISKRIKLNERKQMDMKLPSALSACFYT 337
>gi|45384230|ref|NP_990389.1| gamma-aminobutyric acid receptor subunit alpha-6 precursor [Gallus
gallus]
gi|3023835|sp|Q90845.1|GBRA6_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6;
AltName: Full=GABA(A) receptor subunit alpha-6; Flags:
Precursor
gi|1149507|emb|CAA64069.1| GABA-A receptor a6 subunit [Gallus gallus]
gi|1589637|prf||2211380A GABA type A receptor:SUBUNIT=alpha6
Length = 465
Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 183/296 (61%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+T+ + +LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NITRILDKLLDGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ VE Q L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLHSVEVPQESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 326
>gi|345799376|ref|XP_546242.3| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Canis lupus
familiaris]
Length = 440
Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 145/304 (47%), Positives = 200/304 (65%), Gaps = 5/304 (1%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRPNFGG+P+ + + + IAS SISE +MDYT T+YL Q W D RL F
Sbjct: 43 NLTAGYNKFLRPNFGGEPVQIALTMDIASISSISESNMDYTATIYLRQRWTDQRLVFEG- 101
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
++ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC
Sbjct: 102 NKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACN 161
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
MDL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T +
Sbjct: 162 MDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQRYFTLVTR 221
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TT
Sbjct: 222 SQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTT 281
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK-KP 347
VL+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K +
Sbjct: 282 VLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDRG 341
Query: 348 KAKE 351
+KE
Sbjct: 342 TSKE 345
>gi|13591945|ref|NP_112291.1| gamma-aminobutyric acid receptor subunit pi precursor [Rattus
norvegicus]
gi|3023821|sp|O09028.1|GBRP_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit pi; AltName:
Full=GABA(A) receptor subunit pi; Flags: Precursor
gi|2197003|gb|AAC53255.1| GABA-A receptor pi subunit [Rattus norvegicus]
Length = 440
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 147/304 (48%), Positives = 198/304 (65%), Gaps = 5/304 (1%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRPNFGGDP+ + + L IAS SISE +MDYT T+YL Q W D RL F
Sbjct: 43 NLTAGYNKFLRPNFGGDPVRIALTLDIASISSISESNMDYTATIYLRQRWTDPRLVFEG- 101
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
++ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+ C
Sbjct: 102 NKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVTCN 161
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
MDL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T
Sbjct: 162 MDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQQYFTLVTV 221
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ E+ AR +G+TT
Sbjct: 222 SQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLESVPARTCIGVTT 281
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA-KKKP 347
VL+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K +
Sbjct: 282 VLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAVKDRG 341
Query: 348 KAKE 351
AK+
Sbjct: 342 PAKD 345
>gi|363733739|ref|XP_003641288.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Gallus gallus]
Length = 536
Score = 273 bits (698), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 134/308 (43%), Positives = 190/308 (61%), Gaps = 6/308 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T ++ LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 28 NFTSILNSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDK 87
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 88 RLKYDGPIEILRLNNLMVSKVWTPDTFFRNGKKSVAHNMTAPNKLFRIMRNGTILYTMRL 147
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 148 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPEESSSLVQYDL 207
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 208 LGHTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 267
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 268 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 327
Query: 339 WADRAKKK 346
+RAK+K
Sbjct: 328 QMERAKRK 335
>gi|344265226|ref|XP_003404686.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Loxodonta africana]
Length = 453
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 191/317 (60%), Gaps = 6/317 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NISRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + + TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIQSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEPTPL 355
AK+ + P P+
Sbjct: 331 QTQEAKRNAQIAAPPPV 347
>gi|73954094|ref|XP_546263.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Canis
lupus familiaris]
Length = 453
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 192/317 (60%), Gaps = 6/317 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NISRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEPTPL 355
+AK++ + P+
Sbjct: 331 QTQKAKRRAQNAASPPV 347
>gi|410949389|ref|XP_003981405.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Felis
catus]
Length = 453
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 192/317 (60%), Gaps = 6/317 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NISRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEPTPL 355
+AK++ + P+
Sbjct: 331 QTQKAKRRAQIAASPPV 347
>gi|432949781|ref|XP_004084255.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Oryzias latipes]
Length = 473
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/319 (42%), Positives = 194/319 (60%), Gaps = 6/319 (1%)
Query: 34 HKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTI 93
++ S T+ L N+T+ + +LL GYD RLRP FGG V D+ + SF +S+V M+YT+
Sbjct: 39 NQNSDTSIYLDNITRILDRLLDGYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTM 98
Query: 94 TMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
++ Q W D+RL F E+L L+ KIW PDTFF N K S H++T NKL R+
Sbjct: 99 DVFFRQTWIDERLKFDGPIEILRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIM 158
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA 213
+G+I Y MR T C M L +P+D C ++ SY Y + ++V WK+ P VE
Sbjct: 159 QNGTILYTMRLTINAECPMRLMNFPMDGHACPLKFGSYAYPISEIVYTWKKGPSSSVEVP 218
Query: 214 Q----LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
Q L Q+ ++G G Y +++ F LQR +G+F+ QTY+P I+ V+L+
Sbjct: 219 QESSSLLQYDLIGQTXXXXXVASLAGEYAIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQ 278
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN E+ AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+
Sbjct: 279 VSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 338
Query: 330 EYAAVNY--SYWADRAKKK 346
E+AAVNY + A+R +K
Sbjct: 339 EFAAVNYFSTLQANRELRK 357
>gi|301753447|ref|XP_002912565.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Ailuropoda melanoleuca]
gi|281345131|gb|EFB20715.1| hypothetical protein PANDA_000326 [Ailuropoda melanoleuca]
Length = 453
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 192/317 (60%), Gaps = 6/317 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NISRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEPTPL 355
+AK++ + P+
Sbjct: 331 QTQKAKRRAQIAASPPV 347
>gi|395509796|ref|XP_003759176.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Sarcophilus harrisii]
Length = 441
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/304 (47%), Positives = 199/304 (65%), Gaps = 5/304 (1%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F
Sbjct: 44 NLTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWTDQRLVFEG- 102
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
++ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+ C
Sbjct: 103 NKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVTCN 162
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
MDL YP+D Q C +++ES+GY DV W VRG+E +L Q+T+ + T K
Sbjct: 163 MDLSKYPMDTQTCKLQLESWGYDGSDVEFTWLRGNDSVRGLENLRLAQYTVQRYFTLVTK 222
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TT
Sbjct: 223 SQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVILSWVSFWISLDSVPARTCIGVTT 282
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK-KP 347
VL+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K +
Sbjct: 283 VLSMTTLMIGSRTSLPSTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSSQKMAAKDRG 342
Query: 348 KAKE 351
+KE
Sbjct: 343 TSKE 346
>gi|348535496|ref|XP_003455236.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Oreochromis niloticus]
Length = 440
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/313 (42%), Positives = 192/313 (61%), Gaps = 6/313 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+T+ + +LL GYD RLRP GG V D+ + SF +S+V M+YT+ M+ Q W D+
Sbjct: 30 NITRILDRLLDGYDNRLRPGSGGGVTEVKTDIFVTSFGPVSDVEMEYTMDMFFRQMWVDE 89
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L L+ +KIW PDTFF N K S H++T NKL R+ +G++ Y MR
Sbjct: 90 RLKFEGPTEILRLNNLMVDKIWTPDTFFRNSKKSISHNMTTPNKLFRIMQNGTVLYTMRL 149
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D +C + SY YT +++ W++ P+ V E L Q+ +
Sbjct: 150 TISAECPMSLMDFPMDGHSCPLRFGSYAYTSSEIIFTWRKGPINSVDCPKESMSLLQYDL 209
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y + F LQR +GY++ QTY+P I++V+LS VSFWIN E+
Sbjct: 210 VGQTLSSEIFKSNTGHYSVQVVHFHLQRKLGYYLIQTYIPLIMVVVLSQVSFWINKESVP 269
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP+++Y A+D ++ +CF FV +AL+E+AAVNY +
Sbjct: 270 ARTVAGITTVLTMTTLSISARQSLPKVAYATAMDWFIAVCFAFVASALVEFAAVNYFATL 329
Query: 339 WADRAKKKPKAKE 351
A R KKK +E
Sbjct: 330 QAHRLKKKAARQE 342
>gi|341878818|gb|EGT34753.1| CBN-UNC-49 protein [Caenorhabditis brenneri]
Length = 853
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/340 (43%), Positives = 213/340 (62%), Gaps = 30/340 (8%)
Query: 37 SATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMY 96
S+ +RL N T YD RLRP +G P+ VG+ + ++S ++SEV MD+T+ Y
Sbjct: 37 SSVLDRLTNRTT--------YDKRLRPRYGEKPVDVGITIHVSSISAVSEVDMDFTLDFY 88
Query: 97 LNQYWKDDRLAFSSED-------EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
+ Q W+D RLAF S D + LT+ D+ +K+W PDTFF N+K SF H T N
Sbjct: 89 MRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDKLWKPDTFFPNEKKSFFHLATTHNSF 148
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY------------GYTVLD 197
+R++ DG++ R T T C MDL +P+D+Q+C +EIES+ GY++LD
Sbjct: 149 LRIDSDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESFTNQKHPKRMKNDGYSILD 208
Query: 198 VVMYWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQT 257
+V E E +LPQF + + ++ +KL++G Y RL F +RNIG+++ Q
Sbjct: 209 IVYVSHEKKSVSTESYELPQFVLQSIKVVNQTQKLSSGEYSRLCWYFLFKRNIGFYIIQI 268
Query: 258 YLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYL 317
YLPS+LIV++SWVSFW++ +AT ARVALG+TTVLTMTT+ T S++P++SYVK+IDI+L
Sbjct: 269 YLPSVLIVVISWVSFWLSRDATPARVALGVTTVLTMTTLMTMTNSAMPKVSYVKSIDIFL 328
Query: 318 VMCFVFVFAALLEYAAVNY---SYWADRAKKKPKAKEPTP 354
+CF+ VF +LLEYAAV Y RA+K+ + P P
Sbjct: 329 GVCFMMVFCSLLEYAAVGYISKRMKLVRARKESRMLTPLP 368
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
R + GTY RL +SF R+ G++ Q + P+ L+V+LSW+SFWIN ++ +R +G
Sbjct: 637 RPKSSTIGTYSRLRVSFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSAPSRTLIGT 696
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD---RAK 344
TVLT T + TG LP ++YVKA+D++L C++ V AL+EYA V YS + R +
Sbjct: 697 MTVLTETHLMTGTNRRLPPVAYVKAVDVFLGFCYLLVILALIEYACVAYSKKKNEDRRRR 756
Query: 345 KKPKAKEPTP 354
+K +P P
Sbjct: 757 EKKMEHKPAP 766
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 89/134 (66%), Gaps = 2/134 (1%)
Query: 220 ILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT 279
+LG + L Y RL+L L RN+G++ +PSILIV +SWVSFW+N EA+
Sbjct: 426 MLGRSNSQASVFLYQRKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREAS 485
Query: 280 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--S 337
ARV LG+TTVLTMTT+ T +S+P++SYVK +D++L CFV VFA+LLEYA V+Y
Sbjct: 486 PARVGLGVTTVLTMTTLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLLEYAIVSYMNK 545
Query: 338 YWADRAKKKPKAKE 351
R +K+ KA E
Sbjct: 546 RLVLRREKRRKAAE 559
>gi|395542829|ref|XP_003773327.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Sarcophilus harrisii]
Length = 556
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/316 (42%), Positives = 192/316 (60%), Gaps = 6/316 (1%)
Query: 42 RLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYW 101
R N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W
Sbjct: 44 RPENFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTW 103
Query: 102 KDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYG 161
D RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y
Sbjct: 104 IDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYT 163
Query: 162 MRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQ 217
MR T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q
Sbjct: 164 MRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQ 223
Query: 218 FTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHE 277
+ ++G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E
Sbjct: 224 YDLVGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKE 283
Query: 278 ATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY- 336
+ AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 284 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYF 343
Query: 337 -SYWADRAKKKPKAKE 351
+ ++AKKKP +
Sbjct: 344 TNVQMEKAKKKPSKPQ 359
>gi|22122485|ref|NP_666129.1| gamma-aminobutyric acid receptor subunit pi precursor [Mus
musculus]
gi|62901524|sp|Q8QZW7.1|GBRP_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit pi; AltName:
Full=GABA(A) receptor subunit pi; Flags: Precursor
gi|19343800|gb|AAH25550.1| Gamma-aminobutyric acid (GABA-A) receptor, pi [Mus musculus]
gi|20071049|gb|AAH27245.1| Gamma-aminobutyric acid (GABA-A) receptor, pi [Mus musculus]
gi|21410495|gb|AAH31196.1| Gamma-aminobutyric acid (GABA-A) receptor, pi [Mus musculus]
gi|23272171|gb|AAH23693.1| Gamma-aminobutyric acid (GABA-A) receptor, pi [Mus musculus]
gi|26324910|dbj|BAC26209.1| unnamed protein product [Mus musculus]
gi|74141143|dbj|BAE35885.1| unnamed protein product [Mus musculus]
gi|148691791|gb|EDL23738.1| gamma-aminobutyric acid (GABA-A) receptor, pi [Mus musculus]
Length = 440
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/304 (48%), Positives = 198/304 (65%), Gaps = 5/304 (1%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRPNFGGDP+ + + L IAS SISE +MDYT T+YL Q W D RL F
Sbjct: 43 NLTAGYNKFLRPNFGGDPVRIALTLDIASISSISESNMDYTATIYLRQRWTDPRLVFEG- 101
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
++ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+ C
Sbjct: 102 NKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVTCN 161
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
MDL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T
Sbjct: 162 MDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQQYFTLVTV 221
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TT
Sbjct: 222 SQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTT 281
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRA-KKKP 347
VL+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K +
Sbjct: 282 VLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAVKDRG 341
Query: 348 KAKE 351
AK+
Sbjct: 342 PAKD 345
>gi|449500682|ref|XP_004174868.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit alpha-4 [Taeniopygia guttata]
Length = 554
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/308 (43%), Positives = 190/308 (61%), Gaps = 6/308 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T ++ LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 46 NFTNILNSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDK 105
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 106 RLKYDGPIEILRLNNLMVSKVWTPDTFFRNGKKSVAHNMTAPNKLFRIMRNGTILYTMRL 165
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 166 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPEESSSLVQYDL 225
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 226 LGHTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 285
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 286 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 345
Query: 339 WADRAKKK 346
++AK+K
Sbjct: 346 QMEKAKRK 353
>gi|354491376|ref|XP_003507831.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4,
partial [Cricetulus griseus]
Length = 378
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/325 (41%), Positives = 194/325 (59%), Gaps = 6/325 (1%)
Query: 36 KSATTERLA--NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTI 93
++A E+L N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+
Sbjct: 36 QNAKDEKLCPENFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTM 95
Query: 94 TMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
++ Q W D RL + E+L L+ K+W PDTFF N K S H++T NKL R+
Sbjct: 96 DVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIM 155
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE-- 211
+G+I Y MR T + C M L +P+D C ++ SY Y +++ W + P + VE
Sbjct: 156 RNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVP 215
Query: 212 --EAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
+ L Q+ ++G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS
Sbjct: 216 KESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQ 275
Query: 270 VSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN E+ AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+
Sbjct: 276 VSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
Query: 330 EYAAVNYSYWADRAKKKPKAKEPTP 354
E+AAVNY K K K +P P
Sbjct: 336 EFAAVNYFTNIQMQKAKKKTSKPPP 360
>gi|395542831|ref|XP_003773328.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
2 [Sarcophilus harrisii]
Length = 537
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/316 (42%), Positives = 192/316 (60%), Gaps = 6/316 (1%)
Query: 42 RLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYW 101
R N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W
Sbjct: 25 RPENFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTW 84
Query: 102 KDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYG 161
D RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y
Sbjct: 85 IDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYT 144
Query: 162 MRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQ 217
MR T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q
Sbjct: 145 MRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQ 204
Query: 218 FTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHE 277
+ ++G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E
Sbjct: 205 YDLVGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKE 264
Query: 278 ATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY- 336
+ AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 265 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYF 324
Query: 337 -SYWADRAKKKPKAKE 351
+ ++AKKKP +
Sbjct: 325 TNVQMEKAKKKPSKPQ 340
>gi|311273995|ref|XP_003134138.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Sus
scrofa]
Length = 453
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 183/296 (61%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVQTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYAIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 326
>gi|194219610|ref|XP_001500055.2| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Equus
caballus]
Length = 440
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/297 (48%), Positives = 194/297 (65%), Gaps = 4/297 (1%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F
Sbjct: 43 NLTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWTDRRLVFEGN 102
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC
Sbjct: 103 TS-FTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACN 161
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
MDL YP+D Q C +++ES+GY DV W VRG+E +L Q+T+ + T +
Sbjct: 162 MDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGNDSVRGLENLRLAQYTVQRYFTLVTR 221
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TT
Sbjct: 222 SQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTT 281
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK 345
VL+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K
Sbjct: 282 VLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAK 338
>gi|149412486|ref|XP_001508755.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi
[Ornithorhynchus anatinus]
Length = 441
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/297 (48%), Positives = 197/297 (66%), Gaps = 4/297 (1%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F+
Sbjct: 44 NLTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWTDQRLVFNG- 102
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
++ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC
Sbjct: 103 NKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACN 162
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
MDL YP+D Q C +++ES+GY DV W VRG+E +L Q+T+ + T +
Sbjct: 163 MDLSKYPMDTQMCKLQLESWGYDGNDVEFTWLRGNDSVRGLENLRLAQYTVQRYFTLVTR 222
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TT
Sbjct: 223 SQQETGNYTRLILQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTT 282
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK 345
VL+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K
Sbjct: 283 VLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAIAHYSSLQQLAAK 339
>gi|449273442|gb|EMC82936.1| Gamma-aminobutyric acid receptor subunit alpha-4 [Columba livia]
Length = 554
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/308 (43%), Positives = 190/308 (61%), Gaps = 6/308 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T ++ LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 46 NFTSILNSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDK 105
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 106 RLKYDGPIEILRLNNLMVSKVWTPDTFFRNGKKSVAHNMTAPNKLFRIMRNGTILYTMRL 165
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 166 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPEESSSLVQYDL 225
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 226 LGHTVSTETIKSITGEYVVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 285
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 286 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 345
Query: 339 WADRAKKK 346
++AK+K
Sbjct: 346 QMEKAKRK 353
>gi|194374555|dbj|BAG57173.1| unnamed protein product [Homo sapiens]
Length = 366
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/269 (50%), Positives = 185/269 (68%), Gaps = 5/269 (1%)
Query: 93 ITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
+T+YL YWKD+RLAFSS ++ +T G +KIWVPD FF + K SF HD T N ++R
Sbjct: 1 MTLYLRHYWKDERLAFSSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLR 60
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
+ DG + Y MR T T C MD ++PLD+Q C++E+ESY YT D+++YWK + ++
Sbjct: 61 VFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKT 120
Query: 210 VEEAQLPQFTILGHETNDRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLS 268
E+ L QF I T R + TG Y RL ++F L+R+I +F+ QTY P+ L+VMLS
Sbjct: 121 DEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLS 180
Query: 269 WVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAAL 328
WVSFWI+ A ARV+LGITTVLTMTTI TGV +S+PR+SYVKA+DIYL + FVFVF ++
Sbjct: 181 WVSFWIDRRAVPARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSV 240
Query: 329 LEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
LEYAAVNY + +R ++K + K P G
Sbjct: 241 LEYAAVNYLTTVQERKERKLREKFPCMCG 269
>gi|351696716|gb|EHA99634.1| Gamma-aminobutyric acid receptor subunit alpha-6 [Heterocephalus
glaber]
Length = 453
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/317 (42%), Positives = 192/317 (60%), Gaps = 6/317 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NISRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHVCPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY S
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTSL 330
Query: 339 WADRAKKKPKAKEPTPL 355
A++K + +P+
Sbjct: 331 QTRGARRKAQITAISPV 347
>gi|393911522|gb|EJD76346.1| gamma-aminobutyric acid receptor subunit beta [Loa loa]
Length = 478
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 141/306 (46%), Positives = 205/306 (66%), Gaps = 17/306 (5%)
Query: 47 TQTISQLL------HGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQY 100
T+ IS++L + YD RLRP G +P+ VG+ L ++S +ISEV MD+TI YL Q
Sbjct: 30 TRKISEILDVLIDNNTYDRRLRPKHGEEPVNVGITLHVSSVSAISEVDMDFTIDFYLRQT 89
Query: 101 WKDDRLAFSS------EDEV--LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
W D RLAFS E+ + LT+ D+ +K+W PDTFF N+K S+ H T N +R+
Sbjct: 90 WNDPRLAFSHYLYGIFENNIDSLTVGVDYLQKLWKPDTFFPNEKRSYFHVTTTHNSFLRI 149
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PVRGV 210
+G++ R T T C M+L +P+D+Q C +EIESYGY+VLD+V ++ + PV
Sbjct: 150 YPNGNVFTSQRLTVTAICNMELQLFPMDSQKCKLEIESYGYSVLDIVYFFNNSKNPVSK- 208
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF ++ + R L +G Y RL+ +F +RNIG+++ Q YLPSILIV++SWV
Sbjct: 209 SEFELPQFVLIDIQVASRNVALVSGNYSRLTCTFLFKRNIGFYIIQVYLPSILIVIISWV 268
Query: 271 SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFW+N +AT ARVAL + T+LTMTT++ +S+P++SYVK+IDI+L + F+ VF++LLE
Sbjct: 269 SFWLNRDATPARVALSVLTILTMTTLTATTNASMPKVSYVKSIDIFLGVSFIMVFSSLLE 328
Query: 331 YAAVNY 336
+AAV Y
Sbjct: 329 FAAVGY 334
>gi|14041786|emb|CAC38838.1| glycine receptor alphaZ4 subunit [Danio rerio]
Length = 426
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/275 (48%), Positives = 187/275 (68%), Gaps = 7/275 (2%)
Query: 67 GDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKI 125
G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+ D+ L L + I
Sbjct: 1 GPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYKEYPDDSLDLDPSMLDSI 60
Query: 126 WVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCT 185
W PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL +P+D Q CT
Sbjct: 61 WKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMDLKNFPMDTQTCT 120
Query: 186 VEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTILGHETNDR---KEKLATGTYQRLS 241
V++ES+GYT+ D++ W E PV+ ++ LPQF + E D + TG + +
Sbjct: 121 VQLESFGYTMNDLIFQWLDEGPVQVADDLMLPQFVL--KEEKDLGYCAKHYNTGKFTCIE 178
Query: 242 LSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVR 301
+ F L+R + Y++ Q Y+PS+L V+LSWVSFWIN +A ARV LGITTVLTMTT S+G R
Sbjct: 179 VKFHLERQMAYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSR 238
Query: 302 SSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 239 ASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 273
>gi|392896495|ref|NP_001022781.2| Protein UNC-49, isoform a [Caenorhabditis elegans]
gi|339730631|emb|CAA90318.2| Protein UNC-49, isoform a [Caenorhabditis elegans]
Length = 1095
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 147/340 (43%), Positives = 211/340 (62%), Gaps = 30/340 (8%)
Query: 37 SATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMY 96
S+ +RL N T YD RLRP +G P+ VG+ + ++S ++SEV MD+T+ Y
Sbjct: 35 SSVLDRLTNRTT--------YDKRLRPRYGEKPVDVGITIHVSSISAVSEVDMDFTLDFY 86
Query: 97 LNQYWKDDRLAFSSED-------EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
+ Q W+D RLAF S D + LT+ D+ +++W PDTFF N+K SF H T N
Sbjct: 87 MRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDRLWKPDTFFPNEKKSFFHLATTHNSF 146
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESY------------GYTVLD 197
+R+ GDG++ R T T C MDL +P+D+Q+C +EIES GY++LD
Sbjct: 147 LRIEGDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESCKSLCSPDIFSPNGYSILD 206
Query: 198 VVMYWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQT 257
++ E E +LPQF + + + +KL++G Y RL F +RNIG+++ Q
Sbjct: 207 IMYVSHEKKSVSTESYELPQFVLQSIKVVNHTQKLSSGEYSRLCWFFLFKRNIGFYIIQI 266
Query: 258 YLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYL 317
YLPS+LIV++SWVSFW++ +AT ARVALG+TTVLTMTT+ T SS+P++SYVK+IDI+L
Sbjct: 267 YLPSVLIVVISWVSFWLSRDATPARVALGVTTVLTMTTLMTMTNSSMPKVSYVKSIDIFL 326
Query: 318 VMCFVFVFAALLEYAAVNY---SYWADRAKKKPKAKEPTP 354
+CF+ VF +LLEYAAV Y RA+K+ + P P
Sbjct: 327 GVCFMMVFCSLLEYAAVGYISKRMKLVRARKESRMLTPLP 366
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 108/179 (60%), Gaps = 8/179 (4%)
Query: 181 NQNCTVEIESYGYTVLDVVMYWK------ETPVRGVEEAQLPQFTILGHETNDRKEKLAT 234
N +V + GY D+ YW E + QLPQF + N K + ++
Sbjct: 441 NSQASVFLYQNGYETKDIDYYWGKKRTDLEITAVKFDTFQLPQFQPTLYFVNTTKAETSS 500
Query: 235 GTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 294
G Y RL+L L RN+G++ +PSILIV +SWVSFW+N EA+ ARV LG+TTVLTMT
Sbjct: 501 GKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMT 560
Query: 295 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SYWADRAKKKPKAKE 351
T+ T +S+P++SYVK +D++L CFV VFA+LLEYA V+Y R +K+ KA E
Sbjct: 561 TLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLLEYAIVSYMNKRLVLRREKRRKAAE 619
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 80/125 (64%), Gaps = 3/125 (2%)
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLT 292
++GTY RL +SF R+ G++ Q + P+ L+V+LSW+SFWIN ++ +R +G TVLT
Sbjct: 884 SSGTYSRLRVSFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSAPSRTLIGTMTVLT 943
Query: 293 MTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD---RAKKKPKA 349
T + TG LP ++YVKA+D++L C++ V AL+EYA V YS + R ++K
Sbjct: 944 ETHLMTGTNRRLPPVAYVKAVDVFLGFCYLLVILALIEYACVAYSKKKNEDRRRREKKTE 1003
Query: 350 KEPTP 354
+P P
Sbjct: 1004 HKPAP 1008
>gi|195125047|ref|XP_002006994.1| GI12687 [Drosophila mojavensis]
gi|193918603|gb|EDW17470.1| GI12687 [Drosophila mojavensis]
Length = 609
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 200/342 (58%), Gaps = 50/342 (14%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 117
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 118 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 177
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK------------ETP---- 206
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +W+ E P
Sbjct: 178 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRV 237
Query: 207 ----VRGVE----------------------------EAQLPQFTILGHETNDRKEKLAT 234
R E E LPQF +LGH + L T
Sbjct: 238 LGHRQRATEINLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTT 297
Query: 235 GTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 294
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 298 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 357
Query: 295 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
T+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 358 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 399
>gi|194219631|ref|XP_001503447.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 [Equus
caballus]
Length = 453
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 191/317 (60%), Gaps = 6/317 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+++ + LL GYD RLRP FG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NISRILDNLLEGYDNRLRPGFGNAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ V E + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNL 330
Query: 339 WADRAKKKPKAKEPTPL 355
+AK+K + P+
Sbjct: 331 QTQKAKRKAQIAASPPV 347
>gi|195374728|ref|XP_002046155.1| GJ12672 [Drosophila virilis]
gi|194153313|gb|EDW68497.1| GJ12672 [Drosophila virilis]
Length = 607
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 200/342 (58%), Gaps = 50/342 (14%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 117
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 118 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 177
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK------------ETP---- 206
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +W+ E P
Sbjct: 178 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRV 237
Query: 207 ----VRGVE----------------------------EAQLPQFTILGHETNDRKEKLAT 234
R E E LPQF +LGH + L T
Sbjct: 238 LGHRQRATEINLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTT 297
Query: 235 GTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 294
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 298 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 357
Query: 295 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
T+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 358 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 399
>gi|344265257|ref|XP_003404701.1| PREDICTED: gamma-aminobutyric acid receptor subunit pi-like
[Loxodonta africana]
Length = 440
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 146/304 (48%), Positives = 198/304 (65%), Gaps = 5/304 (1%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F
Sbjct: 43 NLTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWTDLRLVFEG- 101
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
++ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+ C
Sbjct: 102 NKSFTLDARLVEFLWVPDTYIVESKTSFLHEVTVGNRLIRLFSNGTVLYALRITTTVGCN 161
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
MDL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T
Sbjct: 162 MDLSKYPMDTQTCKLQLESWGYDGNDVEFRWLRGNDSVRGLENLRLAQYTIQRYFTLVTW 221
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR +G+TT
Sbjct: 222 SQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTT 281
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKK-KP 347
VL+MTT+ G R+SLP + ++KAID+YL +CF FVF ALLEYA +YS A K +
Sbjct: 282 VLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDRG 341
Query: 348 KAKE 351
AKE
Sbjct: 342 TAKE 345
>gi|194865690|ref|XP_001971555.1| GG15035 [Drosophila erecta]
gi|195326231|ref|XP_002029833.1| GM24889 [Drosophila sechellia]
gi|190653338|gb|EDV50581.1| GG15035 [Drosophila erecta]
gi|194118776|gb|EDW40819.1| GM24889 [Drosophila sechellia]
Length = 631
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 200/342 (58%), Gaps = 50/342 (14%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 117
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 118 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 177
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK------------ETP---- 206
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +W+ E P
Sbjct: 178 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRV 237
Query: 207 ----VRGVE----------------------------EAQLPQFTILGHETNDRKEKLAT 234
R E E LPQF +LGH + L T
Sbjct: 238 LGHRQRATEINLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTT 297
Query: 235 GTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 294
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 298 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 357
Query: 295 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
T+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 358 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 399
>gi|344248984|gb|EGW05088.1| Gamma-aminobutyric acid receptor subunit theta [Cricetulus griseus]
Length = 619
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 133/326 (40%), Positives = 213/326 (65%), Gaps = 19/326 (5%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + K+ E A V + + ++L YD+RLRPNFGG P+ V + + ++S + ISE++M
Sbjct: 40 LDLFNCKNCANE--AVVQKILDRVLSTYDVRLRPNFGGAPVPVSVSIYVSSIEQISEINM 97
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM+L+Q WKD RLA+ + LTL EK+WVPD +F N KN+F+HDVT N++
Sbjct: 98 DYTITMFLHQTWKDTRLAYYETNLNLTLDYRMHEKLWVPDCYFVNSKNAFVHDVTVENRV 157
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIES-YGYTVLDVVMYWK-ETPV 207
+L+ DG++ YG+R T N TV ++ YGYT+ D+V+ W+ E +
Sbjct: 158 FQLHPDGTVRYGIRADT--------------KANFTVSAQTEYGYTIDDIVLSWEDENAI 203
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
+E +PQFT LG ++ TG+Y RL + F++QR + ++ Q Y P++L +L
Sbjct: 204 HITDELHIPQFTYLGRTITSKEVYFYTGSYMRLIVKFQVQREVRSYLVQVYWPTVLTTIL 263
Query: 268 SWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SW+SFW+N+++++ARV +G+T++L +TTI + +R LP IS +KAIDIY+++C FVF +
Sbjct: 264 SWISFWMNYDSSAARVTIGLTSILVLTTIDSHMRDKLPHISCIKAIDIYILVCLFFVFLS 323
Query: 328 LLEYAAVNYSYWADRAKK-KPKAKEP 352
LLEY +NY +++ +++ + + K+P
Sbjct: 324 LLEYVYINYLFFSQESRRNRRRFKKP 349
>gi|327260699|ref|XP_003215171.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6-like
[Anolis carolinensis]
Length = 614
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 131/296 (44%), Positives = 183/296 (61%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+++ + +LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 178 NISRILDKLLDGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDE 237
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 238 RLKFGGPTEILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 297
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ VE Q L Q+ +
Sbjct: 298 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEIPQESSSLLQYDL 357
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 358 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 417
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 418 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 473
>gi|357607538|gb|EHJ65576.1| GABA-gated chloride channel isoform a3 [Danaus plexippus]
Length = 665
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 199/342 (58%), Gaps = 50/342 (14%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 174 NISAILDSFSISYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 233
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 234 RLAYKKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHYSGSITRSI 293
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK------------------- 203
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +WK
Sbjct: 294 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYHWKDGLMSVGMSNEVQLPQFRV 353
Query: 204 ---------------------------ETP--VRGVEEAQLPQFTILGHETNDRKEKLAT 234
E P V E LPQF +LGH + L T
Sbjct: 354 LGHRQRATVVTLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTT 413
Query: 235 GTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 294
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 414 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 473
Query: 295 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
T+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 474 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 515
>gi|431909787|gb|ELK12933.1| Glycine receptor subunit alpha-2 [Pteropus alecto]
Length = 352
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 138/292 (47%), Positives = 193/292 (66%), Gaps = 25/292 (8%)
Query: 66 GGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEK 124
G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+ L L +
Sbjct: 11 AGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDS 70
Query: 125 IWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR--------------FTTTLAC 170
IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C
Sbjct: 71 IWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRNMVSVFLEQPTEARLTLTLSC 130
Query: 171 MMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTI-----LGHE 224
MDL +P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + LG+
Sbjct: 131 PMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYC 190
Query: 225 TNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVA 284
T + TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA
Sbjct: 191 T----KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVA 246
Query: 285 LGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
LGITTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 247 LGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 298
>gi|332861886|ref|XP_521313.3| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-3 [Pan
troglodytes]
Length = 504
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 137/319 (42%), Positives = 190/319 (59%), Gaps = 5/319 (1%)
Query: 39 TTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLN 98
+T+ + T+ + +LL GYD RLRP G V D+ + SF +S+ M+YTI ++
Sbjct: 60 STDNITIFTRILDRLLDGYDNRLRPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFR 119
Query: 99 QYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSI 158
Q W D+RL F ++L L+ A KIW PDTFF N K S H++T NKL+RL +G++
Sbjct: 120 QTWHDERLKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTL 179
Query: 159 TYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ---- 214
Y MR T C M L +P+D C ++ SY YT +VV W + VE AQ
Sbjct: 180 LYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSR 239
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
L Q+ +LGH + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+
Sbjct: 240 LNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWL 299
Query: 275 NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
N E+ AR GIT+VLTMTT+ T R + PR+SY+ A+D Y+ +CFVF F ALLE+A +
Sbjct: 300 NRESVPARTVFGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALLEFAVL 359
Query: 335 NY-SYWADRAKKKPKAKEP 352
N+ Y +A PK + P
Sbjct: 360 NFLIYNQTKAHASPKLRHP 378
>gi|194752009|ref|XP_001958315.1| GF23583 [Drosophila ananassae]
gi|190625597|gb|EDV41121.1| GF23583 [Drosophila ananassae]
Length = 637
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 200/342 (58%), Gaps = 50/342 (14%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 59 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 118
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 119 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 178
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK------------ETP---- 206
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +W+ E P
Sbjct: 179 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRV 238
Query: 207 ----VRGVE----------------------------EAQLPQFTILGHETNDRKEKLAT 234
R E E LPQF +LGH + L T
Sbjct: 239 LGHRQRATEINLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTT 298
Query: 235 GTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 294
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 299 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 358
Query: 295 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
T+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 359 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 400
>gi|195442824|ref|XP_002069146.1| GK24333 [Drosophila willistoni]
gi|194165231|gb|EDW80132.1| GK24333 [Drosophila willistoni]
Length = 643
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 200/342 (58%), Gaps = 50/342 (14%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 117
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 118 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 177
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK------------ETP---- 206
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +W+ E P
Sbjct: 178 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRV 237
Query: 207 ----VRGVE----------------------------EAQLPQFTILGHETNDRKEKLAT 234
R E E LPQF +LGH + L T
Sbjct: 238 LGHRQRATEINLTTVGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKVLGHRQRAMEISLTT 297
Query: 235 GTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMT 294
G Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT ARVALG+TTVLTMT
Sbjct: 298 GNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 357
Query: 295 TISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
T+ + ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 358 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 399
>gi|296196621|ref|XP_002745921.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4
[Callithrix jacchus]
Length = 554
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/318 (42%), Positives = 193/318 (60%), Gaps = 9/318 (2%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 346
Query: 339 WADRAKK---KPKAKEPT 353
++AKK KP + PT
Sbjct: 347 QMEKAKKKTSKPPQEAPT 364
>gi|403284710|ref|XP_003933701.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4
[Saimiri boliviensis boliviensis]
Length = 553
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/318 (42%), Positives = 193/318 (60%), Gaps = 9/318 (2%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 346
Query: 339 WADRAKK---KPKAKEPT 353
++AKK KP + PT
Sbjct: 347 QMEKAKKKTSKPPQEAPT 364
>gi|149412517|ref|XP_001505750.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Ornithorhynchus anatinus]
Length = 451
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 183/296 (61%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+T+ + +LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NITRILDKLLDGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFRGPTEILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ VE Q L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPQESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYIIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 326
>gi|110645496|gb|AAI18789.1| gabrg1 protein [Xenopus (Silurana) tropicalis]
Length = 374
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 189/294 (64%), Gaps = 2/294 (0%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 65 DVTSILNGLLKGYDNKLRPDIGVKPTVIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDR 124
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 125 RLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRL 184
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTILG 222
T C + LH +P+D +C +E SYGY +++ WK + V V +L QF+ +G
Sbjct: 185 TIDAECQLQLHNFPMDEHSCPLEFSSYGYPKEEIIYQWKRSSVEVGDVRSWRLYQFSFVG 244
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ K +G Y +++ F L R +GYF QTY+P LIV+LSWVSFWIN +A AR
Sbjct: 245 LRNTTEEVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPAR 304
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVFAAL+EY ++Y
Sbjct: 305 TSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHY 358
>gi|426248632|ref|XP_004018064.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3 [Ovis
aries]
Length = 475
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 137/339 (40%), Positives = 205/339 (60%), Gaps = 9/339 (2%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTI 78
E + +S S + + KS T+ VT +++LL YD +LRP+ G P + +D+ +
Sbjct: 32 EDEYEDSSSNQKWVLAPKSQDTD----VTLILNKLLREYDKKLRPDIGIKPTVIDVDIYV 87
Query: 79 ASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNS 138
S +S ++M+Y I ++ Q W D RL F+S ++LTL+ + IW+PDT F N K +
Sbjct: 88 NSIGPVSSINMEYQIDIFFAQTWTDSRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTA 147
Query: 139 FLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDV 198
H +T N+L+R+ DG I Y +R T C + LH +P+D +C + SYGY ++
Sbjct: 148 EAHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEM 207
Query: 199 VMYWKETPVRGVEEA--QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQ 256
+ W++ V ++ +L QF +G + + G Y +++ F+L R +GYF Q
Sbjct: 208 IYRWRKNSVEAADQKSWRLYQFDFMGLRNTTEIVQTSAGDYVVMTIYFELSRRMGYFTIQ 267
Query: 257 TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY 316
TY+P IL V+LSWVSFWI +AT AR ALGITTVLTMTT+ST R SLPR+SYV A+D++
Sbjct: 268 TYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLF 327
Query: 317 LVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPTPL 355
+ +CF+FVFAAL+EYA +NY +K P K+ T L
Sbjct: 328 VTVCFLFVFAALMEYATLNY---YSSCRKPPTTKKKTSL 363
>gi|194676758|ref|XP_001789268.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3 [Bos
taurus]
Length = 495
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 137/339 (40%), Positives = 206/339 (60%), Gaps = 9/339 (2%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTI 78
E + +S S + + KS T+ VT +++LL YD +LRP+ G P + +D+ +
Sbjct: 52 EDEYEDSSSNQKWVLAPKSQDTD----VTLILNKLLREYDKKLRPDIGIKPTVIDVDIYV 107
Query: 79 ASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNS 138
S +S ++M+Y I ++ Q W D RL F+S ++LTL+ + IW+PDT F N K +
Sbjct: 108 NSIGPVSSINMEYQIDIFFAQTWTDSRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTA 167
Query: 139 FLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDV 198
H +T N+L+R+ DG I Y +R T C + LH +P+D +C + SYGY ++
Sbjct: 168 EAHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEM 227
Query: 199 VMYWKETPVRGVEEA--QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQ 256
+ W++ V ++ +L QF +G + + G Y +++ F+L R +GYF Q
Sbjct: 228 IYRWRKNSVEAADQKSWRLYQFDFMGLRNTTEIVQTSAGDYVVMTIYFELSRRMGYFTIQ 287
Query: 257 TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY 316
TY+P IL V+LSWVSFWI +AT AR ALGITTVLTMTT+ST R+SLPR+SYV A+D++
Sbjct: 288 TYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTLSTIARNSLPRVSYVTAMDLF 347
Query: 317 LVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPTPL 355
+ +CF+FVFAAL+EYA +NY +K P K+ T L
Sbjct: 348 VTVCFLFVFAALMEYATLNY---YSSCRKPPTTKKKTSL 383
>gi|410957682|ref|XP_003985454.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Felis catus]
Length = 554
Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 135/323 (41%), Positives = 195/323 (60%), Gaps = 7/323 (2%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 346
Query: 339 WADRAKKK-PKAKEPTPLGNYIR 360
++AK+K KA + P +R
Sbjct: 347 QMEKAKRKSSKAPQEIPAAPVLR 369
>gi|297673418|ref|XP_002814765.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit alpha-4 [Pongo abelii]
Length = 554
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 187/312 (59%), Gaps = 4/312 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPXEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 346
Query: 341 DRAKKKPKAKEP 352
K K K +P
Sbjct: 347 QMEKAKRKTSKP 358
>gi|410957684|ref|XP_003985455.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
2 [Felis catus]
Length = 535
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/323 (41%), Positives = 195/323 (60%), Gaps = 7/323 (2%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 28 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 87
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 88 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 147
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 148 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 207
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 208 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 267
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 268 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 327
Query: 339 WADRAKKK-PKAKEPTPLGNYIR 360
++AK+K KA + P +R
Sbjct: 328 QMEKAKRKSSKAPQEIPAAPVLR 350
>gi|334311425|ref|XP_001379989.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6 isoform
1 [Monodelphis domestica]
Length = 449
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 183/296 (61%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 30 NISRILDNLLDGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 89
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F ++L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 90 RLKFRGPSKILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 149
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ VE Q L Q+ +
Sbjct: 150 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPQESSSLLQYDL 209
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 210 IGQTVSSEIIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 269
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 270 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 325
>gi|301624789|ref|XP_002941681.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2
[Xenopus (Silurana) tropicalis]
Length = 505
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 189/294 (64%), Gaps = 2/294 (0%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 95 DVTSILNGLLKGYDNKLRPDIGVKPTVIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDR 154
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 155 RLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRL 214
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTILG 222
T C + LH +P+D +C +E SYGY +++ WK + V V +L QF+ +G
Sbjct: 215 TIDAECQLQLHNFPMDEHSCPLEFSSYGYPKEEIIYQWKRSSVEVGDVRSWRLYQFSFVG 274
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ K +G Y +++ F L R +GYF QTY+P LIV+LSWVSFWIN +A AR
Sbjct: 275 LRNTTEEVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPAR 334
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVFAAL+EY ++Y
Sbjct: 335 TSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHY 388
>gi|327281247|ref|XP_003225360.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like,
partial [Anolis carolinensis]
Length = 377
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 184/299 (61%), Gaps = 4/299 (1%)
Query: 42 RLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYW 101
R N T+ + +LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W
Sbjct: 43 RPENFTRILDRLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTW 102
Query: 102 KDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYG 161
D RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y
Sbjct: 103 VDKRLRYDGPIEILRLNNLMVTKVWTPDTFFRNGKKSVAHNMTAPNKLFRIMRNGTILYT 162
Query: 162 MRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE----EAQLPQ 217
MR T + C M L +P+D C ++ SY Y +++ W + P VE + L Q
Sbjct: 163 MRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPQHSVEVPEESSSLVQ 222
Query: 218 FTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHE 277
+ +LGH + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E
Sbjct: 223 YDLLGHTASTDTVKSITGEYIVMTVHFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKE 282
Query: 278 ATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 283 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 341
>gi|33468895|ref|NP_034381.1| gamma-aminobutyric acid receptor subunit alpha-4 precursor [Mus
musculus]
gi|13959377|sp|Q9D6F4.1|GBRA4_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4;
AltName: Full=GABA(A) receptor subunit alpha-4; Flags:
Precursor
gi|12851205|dbj|BAB28975.1| unnamed protein product [Mus musculus]
gi|26335917|dbj|BAC31659.1| unnamed protein product [Mus musculus]
gi|63101340|gb|AAH94603.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 4 [Mus
musculus]
gi|148705864|gb|EDL37811.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 4, isoform
CRA_b [Mus musculus]
Length = 552
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/334 (41%), Positives = 197/334 (58%), Gaps = 17/334 (5%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTI 78
ES NS EKL C + N T+ + LL GYD RLRP FGG V D+ +
Sbjct: 32 ESPGQNSKDEKL--CPE---------NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYV 80
Query: 79 ASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNS 138
SF +S+V M+YT+ ++ Q W D RL + E+L L+ K+W PDTFF N K S
Sbjct: 81 TSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKS 140
Query: 139 FLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDV 198
H++T NKL R+ +G+I Y MR T + C M L +P+D C ++ SY Y ++
Sbjct: 141 VSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEM 200
Query: 199 VMYWKETPVRGVE----EAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFV 254
+ W + P + VE + L Q+ ++G + K TG Y +++ F L+R +GYF+
Sbjct: 201 IYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFM 260
Query: 255 FQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID 314
QTY+P I+ V+LS VSFWIN E+ AR GITTVLTMTT+S R SLP++SY A+D
Sbjct: 261 IQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMD 320
Query: 315 IYLVMCFVFVFAALLEYAAVNY--SYWADRAKKK 346
++ +CF FVF+AL+E+AAVNY + +AKKK
Sbjct: 321 WFIAVCFAFVFSALIEFAAVNYFTNIQMQKAKKK 354
>gi|94400793|ref|NP_542154.3| gamma-aminobutyric acid receptor subunit alpha-4 precursor [Rattus
norvegicus]
gi|120763|sp|P28471.1|GBRA4_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4;
AltName: Full=GABA(A) receptor subunit alpha-4; Flags:
Precursor
gi|204210|gb|AAC42032.1| GABA-A receptor alpha-4 subunit [Rattus norvegicus]
gi|236012|gb|AAB19902.1| GABAA receptor alpha 4 subunit [Rattus sp.]
gi|149035301|gb|EDL90005.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 4 [Rattus
norvegicus]
Length = 552
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/334 (41%), Positives = 197/334 (58%), Gaps = 17/334 (5%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTI 78
ES NS EKL C + N T+ + LL GYD RLRP FGG V D+ +
Sbjct: 32 ESPGQNSKDEKL--CPE---------NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYV 80
Query: 79 ASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNS 138
SF +S+V M+YT+ ++ Q W D RL + E+L L+ K+W PDTFF N K S
Sbjct: 81 TSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKS 140
Query: 139 FLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDV 198
H++T NKL R+ +G+I Y MR T + C M L +P+D C ++ SY Y ++
Sbjct: 141 VSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEM 200
Query: 199 VMYWKETPVRGVE----EAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFV 254
+ W + P + VE + L Q+ ++G + K TG Y +++ F L+R +GYF+
Sbjct: 201 IYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFM 260
Query: 255 FQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID 314
QTY+P I+ V+LS VSFWIN E+ AR GITTVLTMTT+S R SLP++SY A+D
Sbjct: 261 IQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMD 320
Query: 315 IYLVMCFVFVFAALLEYAAVNY--SYWADRAKKK 346
++ +CF FVF+AL+E+AAVNY + +AKKK
Sbjct: 321 WFIAVCFAFVFSALIEFAAVNYFTNIQMQKAKKK 354
>gi|449475342|ref|XP_002188723.2| PREDICTED: gamma-aminobutyric acid receptor subunit pi [Taeniopygia
guttata]
Length = 411
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/300 (47%), Positives = 196/300 (65%), Gaps = 4/300 (1%)
Query: 52 QLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE 111
L GY+ LRP FGG+P+ + + L IAS SISE MDYT T+ L Q W D RL F
Sbjct: 8 NLTMGYNKYLRPYFGGEPVQIAISLDIASISSISESDMDYTATISLQQRWTDPRLVFHG- 66
Query: 112 DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACM 171
++ TL E +WVPDT+ K SFLHDVT N+LVRL +G++ Y +R TTT+AC
Sbjct: 67 NKSFTLDARLVELLWVPDTYIVESKRSFLHDVTVGNRLVRLFSNGTVLYALRITTTVACN 126
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYW--KETPVRGVEEAQLPQFTILGHETNDRK 229
M+L YP+D Q C +++ES+GY DV W VRG+E+ +L Q+T+ + T K
Sbjct: 127 MELSKYPMDTQTCRLQLESWGYDENDVTFTWLRGNNSVRGIEKLRLSQYTVEHYHTLVSK 186
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITT 289
+ TG+Y RL L F+L+RN+ YF+ +TY+PS L+VMLSWVSFWI ++ AR +G+TT
Sbjct: 187 SQQETGSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTT 246
Query: 290 VLTMTTISTGVRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPK 348
VL+MTT+ G RS L + + ++KAID+YL +CF F+F AL+EYA +YS A K P+
Sbjct: 247 VLSMTTLMVGSRSLLSKTNCFIKAIDVYLGICFSFIFGALVEYAVAHYSSSQKCAAKVPE 306
>gi|395509128|ref|XP_003758857.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-6
[Sarcophilus harrisii]
Length = 459
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 183/296 (61%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 35 NISRILDNLLDGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 94
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F ++L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 95 RLKFRGPSKILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 154
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ VE Q L Q+ +
Sbjct: 155 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPQESSSLLQYDL 214
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 215 IGQTVSSEIIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 274
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 275 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 330
>gi|148705863|gb|EDL37810.1| gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 4, isoform
CRA_a [Mus musculus]
Length = 603
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/334 (41%), Positives = 197/334 (58%), Gaps = 17/334 (5%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTI 78
ES NS EKL C + N T+ + LL GYD RLRP FGG V D+ +
Sbjct: 83 ESPGQNSKDEKL--CPE---------NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYV 131
Query: 79 ASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNS 138
SF +S+V M+YT+ ++ Q W D RL + E+L L+ K+W PDTFF N K S
Sbjct: 132 TSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKS 191
Query: 139 FLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDV 198
H++T NKL R+ +G+I Y MR T + C M L +P+D C ++ SY Y ++
Sbjct: 192 VSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEM 251
Query: 199 VMYWKETPVRGVE----EAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFV 254
+ W + P + VE + L Q+ ++G + K TG Y +++ F L+R +GYF+
Sbjct: 252 IYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFM 311
Query: 255 FQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID 314
QTY+P I+ V+LS VSFWIN E+ AR GITTVLTMTT+S R SLP++SY A+D
Sbjct: 312 IQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMD 371
Query: 315 IYLVMCFVFVFAALLEYAAVNY--SYWADRAKKK 346
++ +CF FVF+AL+E+AAVNY + +AKKK
Sbjct: 372 WFIAVCFAFVFSALIEFAAVNYFTNIQMQKAKKK 405
>gi|297678672|ref|XP_002817186.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-1 [Pongo abelii]
Length = 478
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 209/335 (62%), Gaps = 12/335 (3%)
Query: 33 CHKK-SATTERLANVTQTI----SQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
HK+ S R ++T++ QLL +D +RP FGG + VG+D+ + S DSIS
Sbjct: 54 AHKQVSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSIS 113
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTE 145
EV MD+T+T+YL+ +D+RL+F + + G + F + K SF+HD T
Sbjct: 114 EVDMDFTMTLYLSXLLEDERLSFPAPPPQHDIDGRLVRRSGSXHVF-VHSKRSFIHDTTT 172
Query: 146 RNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE- 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 173 DNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKG 232
Query: 205 -TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSI 262
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 233 NDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPAT 292
Query: 263 LIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 322
L+VMLSWVSFWI+ A ARV LGITTVLTM+TI TGV +S+PR+SY+KA+DIYL + FV
Sbjct: 293 LMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFV 352
Query: 323 FVFAALLEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
FVF ++LEYAAVNY + +R ++K + K P G
Sbjct: 353 FVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSG 387
>gi|109074156|ref|XP_001101231.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 [Macaca
mulatta]
gi|355687260|gb|EHH25844.1| GABA(A) receptor subunit alpha-4 [Macaca mulatta]
gi|355749254|gb|EHH53653.1| GABA(A) receptor subunit alpha-4 [Macaca fascicularis]
Length = 554
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 187/312 (59%), Gaps = 4/312 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 346
Query: 341 DRAKKKPKAKEP 352
K K K +P
Sbjct: 347 QMEKAKRKTSKP 358
>gi|348571820|ref|XP_003471693.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 1 [Cavia porcellus]
Length = 536
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/341 (40%), Positives = 199/341 (58%), Gaps = 16/341 (4%)
Query: 18 LESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLT 77
L G ++ E+ +LC + N T+ + LL GYD RLRP FGG V D+
Sbjct: 11 LNESPGQNEKEE-KLCPE---------NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIY 60
Query: 78 IASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKN 137
+ SF +S+V M+YT+ ++ Q W D RL + E+L L+ K+W PDTFF N K
Sbjct: 61 VTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKK 120
Query: 138 SFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLD 197
S H++T NKL R+ +G+I Y MR T + C M L +P+D C ++ SY Y +
Sbjct: 121 SVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSE 180
Query: 198 VVMYWKETPVRGV----EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYF 253
++ W + P + V E + L Q+ ++G + K TG Y +++ F L+R +GYF
Sbjct: 181 MIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVHFHLRRKMGYF 240
Query: 254 VFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAI 313
+ QTY+P I+ V+LS VSFWIN E+ AR GITTVLTMTT+S R SLP++SY A+
Sbjct: 241 MIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAM 300
Query: 314 DIYLVMCFVFVFAALLEYAAVNY--SYWADRAKKKPKAKEP 352
D ++ +CF FVF+AL+E+AAVNY + +AKKK P
Sbjct: 301 DWFIAVCFAFVFSALIEFAAVNYFTNIQMQKAKKKTSKSVP 341
>gi|74200707|dbj|BAE24741.1| unnamed protein product [Mus musculus]
Length = 547
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/334 (41%), Positives = 197/334 (58%), Gaps = 17/334 (5%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTI 78
ES NS EKL C + N T+ + LL GYD RLRP FGG V D+ +
Sbjct: 32 ESPGQNSKDEKL--CPE---------NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYV 80
Query: 79 ASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNS 138
SF +S+V M+YT+ ++ Q W D RL + E+L L+ K+W PDTFF N K S
Sbjct: 81 TSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKS 140
Query: 139 FLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDV 198
H++T NKL R+ +G+I Y MR T + C M L +P+D C ++ SY Y ++
Sbjct: 141 VSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPRSEM 200
Query: 199 VMYWKETPVRGVE----EAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFV 254
+ W + P + VE + L Q+ ++G + K TG Y +++ F L+R +GYF+
Sbjct: 201 IYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFM 260
Query: 255 FQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID 314
QTY+P I+ V+LS VSFWIN E+ AR GITTVLTMTT+S R SLP++SY A+D
Sbjct: 261 IQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMD 320
Query: 315 IYLVMCFVFVFAALLEYAAVNY--SYWADRAKKK 346
++ +CF FVF+AL+E+AAVNY + +AKKK
Sbjct: 321 WFIAVCFAFVFSALIEFAAVNYFTNIQMQKAKKK 354
>gi|402869290|ref|XP_003898696.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 [Papio
anubis]
Length = 554
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 187/312 (59%), Gaps = 4/312 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 346
Query: 341 DRAKKKPKAKEP 352
K K K +P
Sbjct: 347 QMEKAKRKTSKP 358
>gi|291385736|ref|XP_002709462.1| PREDICTED: gamma-aminobutyric acid A receptor, alpha 4 [Oryctolagus
cuniculus]
Length = 554
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/323 (41%), Positives = 194/323 (60%), Gaps = 7/323 (2%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 346
Query: 339 WADRAKKKP-KAKEPTPLGNYIR 360
++AK+K K + P +R
Sbjct: 347 QMEKAKRKASKTPQENPAAPVLR 369
>gi|47219236|emb|CAG11698.1| unnamed protein product [Tetraodon nigroviridis]
Length = 461
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/319 (42%), Positives = 198/319 (62%), Gaps = 12/319 (3%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
++VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 57 SDVTHILNSLLDGYDNKLRPDIGVKPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTWFD 116
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG I Y +R
Sbjct: 117 RRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLR 176
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + L+ +P+D +C +E SYGY ++V WK + V V +L QF+ +
Sbjct: 177 LTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSVEVGDVRSWRLYQFSFV 236
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G + +G Y L++ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 237 GLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 296
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD 341
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVFAAL+EY ++Y
Sbjct: 297 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYFV--- 353
Query: 342 RAKKKPKA------KEPTP 354
+ +KP A K PTP
Sbjct: 354 -SNRKPSAKKDKKKKNPTP 371
>gi|74137499|dbj|BAE35793.1| unnamed protein product [Mus musculus]
Length = 362
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/269 (49%), Positives = 186/269 (69%), Gaps = 5/269 (1%)
Query: 93 ITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
+T+YL YW+D+RLAF SS ++ +T G +KIWVPD FF + K SF+HD T N ++R
Sbjct: 1 MTLYLRHYWRDERLAFPSSSNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLR 60
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
+ DG + Y MR T T C MD ++PLD+Q C++E+ESY YT D+++YWK + ++
Sbjct: 61 VFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKT 120
Query: 210 VEEAQLPQFTILGHETNDRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLS 268
E+ L QF I T R + TG Y RL ++F L+R+I +F+ QTY P+ L+VMLS
Sbjct: 121 DEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLS 180
Query: 269 WVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAAL 328
WVSFWI+H A ARV+LGI TVLTM+TI TGV +S+PR+SY++A+DIYL + FVFVF ++
Sbjct: 181 WVSFWIDHRAVPARVSLGIMTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSV 240
Query: 329 LEYAAVNY-SYWADRAKKKPKAKEPTPLG 356
LEYAAVNY + ++ ++K + K P G
Sbjct: 241 LEYAAVNYLTTLQEQKERKFREKLPCMCG 269
>gi|905393|gb|AAB52519.1| GABAA receptor subunit alpha4 [Homo sapiens]
Length = 554
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 188/312 (60%), Gaps = 4/312 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
AR GITTVLTMTT+S R SLP++SY+ A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYLTAMDWFIAVCFAFVFSALIEFAAVNYFTNI 346
Query: 341 DRAKKKPKAKEP 352
K K K +P
Sbjct: 347 QMEKAKRKTSKP 358
>gi|395843745|ref|XP_003794634.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4
[Otolemur garnettii]
Length = 555
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/308 (42%), Positives = 188/308 (61%), Gaps = 6/308 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE----EAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ W + P + VE + L Q+ +
Sbjct: 167 TINAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 346
Query: 339 WADRAKKK 346
++AKKK
Sbjct: 347 QMEKAKKK 354
>gi|34452723|ref|NP_000800.2| gamma-aminobutyric acid receptor subunit alpha-4 isoform 1
precursor [Homo sapiens]
gi|114594937|ref|XP_526774.2| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
3 [Pan troglodytes]
gi|206729865|sp|P48169.2|GBRA4_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4;
AltName: Full=GABA(A) receptor subunit alpha-4; Flags:
Precursor
gi|23272311|gb|AAH35055.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 4 [Homo sapiens]
gi|119613435|gb|EAW93029.1| gamma-aminobutyric acid (GABA) A receptor, alpha 4 [Homo sapiens]
gi|123981552|gb|ABM82605.1| gamma-aminobutyric acid (GABA) A receptor, alpha 4 [synthetic
construct]
gi|123996377|gb|ABM85790.1| gamma-aminobutyric acid (GABA) A receptor, alpha 4 [synthetic
construct]
gi|157928220|gb|ABW03406.1| gamma-aminobutyric acid (GABA) A receptor, alpha 4 [synthetic
construct]
gi|193786905|dbj|BAG52228.1| unnamed protein product [Homo sapiens]
Length = 554
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 187/312 (59%), Gaps = 4/312 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 346
Query: 341 DRAKKKPKAKEP 352
K K K +P
Sbjct: 347 QMEKAKRKTSKP 358
>gi|397490151|ref|XP_003816071.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Pan paniscus]
Length = 554
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 187/312 (59%), Gaps = 4/312 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 346
Query: 341 DRAKKKPKAKEP 352
K K K +P
Sbjct: 347 QMEKAKRKTSKP 358
>gi|338723634|ref|XP_003364763.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 2 [Equus caballus]
Length = 536
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 199/339 (58%), Gaps = 19/339 (5%)
Query: 14 SENELESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVG 73
S NE Q N EKL C + N T+ + LL GYD RLRP FGG V
Sbjct: 10 SLNETPGQ--NQKEEKL--CQE---------NFTRILDGLLDGYDNRLRPGFGGPVTEVK 56
Query: 74 MDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFA 133
D+ + SF +S+V M+YT+ ++ Q W D RL + E+L L+ K+W PDTFF
Sbjct: 57 TDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFR 116
Query: 134 NDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGY 193
N K S H++T NKL R+ +G+I Y MR T + C M L +P+D C ++ SY Y
Sbjct: 117 NGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAY 176
Query: 194 TVLDVVMYWKETPVRGV----EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRN 249
+++ W + P + V E + L Q+ ++G + K TG Y +++ F L+R
Sbjct: 177 PKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRK 236
Query: 250 IGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISY 309
+GYF+ QTY+P I+ V+LS VSFWIN E+ AR GITTVLTMTT+S R SLP++SY
Sbjct: 237 MGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSY 296
Query: 310 VKAIDIYLVMCFVFVFAALLEYAAVNY--SYWADRAKKK 346
A+D ++ +CF FVF+AL+E+AAVNY + ++AKKK
Sbjct: 297 ATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKKK 335
>gi|149702776|ref|XP_001496046.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 1 [Equus caballus]
Length = 555
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/337 (41%), Positives = 198/337 (58%), Gaps = 19/337 (5%)
Query: 16 NELESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMD 75
NE Q N EKL C + N T+ + LL GYD RLRP FGG V D
Sbjct: 31 NETPGQ--NQKEEKL--CQE---------NFTRILDGLLDGYDNRLRPGFGGPVTEVKTD 77
Query: 76 LTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFAND 135
+ + SF +S+V M+YT+ ++ Q W D RL + E+L L+ K+W PDTFF N
Sbjct: 78 IYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNG 137
Query: 136 KNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTV 195
K S H++T NKL R+ +G+I Y MR T + C M L +P+D C ++ SY Y
Sbjct: 138 KKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPK 197
Query: 196 LDVVMYWKETPVRGV----EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIG 251
+++ W + P + V E + L Q+ ++G + K TG Y +++ F L+R +G
Sbjct: 198 SEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMG 257
Query: 252 YFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVK 311
YF+ QTY+P I+ V+LS VSFWIN E+ AR GITTVLTMTT+S R SLP++SY
Sbjct: 258 YFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYAT 317
Query: 312 AIDIYLVMCFVFVFAALLEYAAVNY--SYWADRAKKK 346
A+D ++ +CF FVF+AL+E+AAVNY + ++AKKK
Sbjct: 318 AMDWFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKKK 354
>gi|344288339|ref|XP_003415908.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 1 [Loxodonta africana]
Length = 555
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 187/312 (59%), Gaps = 4/312 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 167 TISAECPMRLVNFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 346
Query: 341 DRAKKKPKAKEP 352
K K K +P
Sbjct: 347 QMEKAKRKTSKP 358
>gi|443730618|gb|ELU16042.1| hypothetical protein CAPTEDRAFT_114809, partial [Capitella teleta]
Length = 316
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 123/271 (45%), Positives = 186/271 (68%), Gaps = 4/271 (1%)
Query: 69 PLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED----EVLTLSGDFAEK 124
P V + + I SF +ISE +MD+++ +YL Q W+D+RL + +D + L L ++
Sbjct: 1 PTIVQLGIYINSFYAISEQTMDFSLNLYLRQQWRDNRLQYDKKDNNGQDKLKLGDGMWDR 60
Query: 125 IWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNC 184
+W PD FF N+K + H VT N+L+ L+ +G++ Y + T TL+C M LH YPLD Q+C
Sbjct: 61 LWTPDVFFRNEKKAAFHVVTTPNRLLNLHSNGTVWYVSKITATLSCPMRLHKYPLDTQDC 120
Query: 185 TVEIESYGYTVLDVVMYWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSF 244
+ ES+GYT+ ++ W +PV+ + +LPQF ++ H ND + TG Y L + F
Sbjct: 121 PMMFESFGYTMEHIIYKWLPSPVQREKGLELPQFRLVDHSLNDCSQNYTTGAYPCLEVRF 180
Query: 245 KLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSL 304
L+R+IGY++ Q Y+P++LIV+LSWV+FWI+ +A ARV +G+ TVLTMTT STG R+ L
Sbjct: 181 ILKRDIGYYMIQLYVPTVLIVILSWVAFWISIDAIPARVTIGLLTVLTMTTQSTGARTQL 240
Query: 305 PRISYVKAIDIYLVMCFVFVFAALLEYAAVN 335
PR+SY+KAID+++V+C +FVFA+LLE+A VN
Sbjct: 241 PRVSYIKAIDVWMVVCLIFVFASLLEFAVVN 271
>gi|380796557|gb|AFE70154.1| gamma-aminobutyric acid receptor subunit alpha-4 isoform 1
precursor, partial [Macaca mulatta]
Length = 541
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 187/312 (59%), Gaps = 4/312 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 34 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 93
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 94 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 153
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 154 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 213
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 214 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 273
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 274 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 333
Query: 341 DRAKKKPKAKEP 352
K K K +P
Sbjct: 334 QMEKAKRKTSKP 345
>gi|351698146|gb|EHB01065.1| Gamma-aminobutyric acid receptor subunit alpha-4 [Heterocephalus
glaber]
Length = 555
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/308 (42%), Positives = 188/308 (61%), Gaps = 6/308 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 346
Query: 339 WADRAKKK 346
+AKKK
Sbjct: 347 QMQKAKKK 354
>gi|410915006|ref|XP_003970978.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Takifugu rubripes]
Length = 472
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 130/308 (42%), Positives = 194/308 (62%), Gaps = 6/308 (1%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
++VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 60 SDVTHILNSLLDGYDNKLRPDIGVKPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTWYD 119
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG I Y +R
Sbjct: 120 RRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLR 179
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + L+ +P+D +C +E SYGY ++V WK + V + +L QF+ +
Sbjct: 180 LTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSVEVGDIRSWRLYQFSFV 239
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G + +G Y L++ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 240 GLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 299
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD 341
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVFAAL+EY ++Y
Sbjct: 300 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYFV--- 356
Query: 342 RAKKKPKA 349
+ +KP A
Sbjct: 357 -SNRKPSA 363
>gi|344288341|ref|XP_003415909.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 2 [Loxodonta africana]
Length = 536
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 187/312 (59%), Gaps = 4/312 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 28 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 87
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 88 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 147
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 148 TISAECPMRLVNFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 207
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 208 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 267
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 268 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 327
Query: 341 DRAKKKPKAKEP 352
K K K +P
Sbjct: 328 QMEKAKRKTSKP 339
>gi|143811394|sp|P20237.2|GBRA4_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4;
AltName: Full=GABA(A) receptor subunit alpha-4; Flags:
Precursor
gi|115305322|gb|AAI23425.1| Gamma-aminobutyric acid (GABA) A receptor, alpha 4 [Bos taurus]
gi|440908384|gb|ELR58405.1| Gamma-aminobutyric acid receptor subunit alpha-4 [Bos grunniens
mutus]
Length = 555
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 189/308 (61%), Gaps = 6/308 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNV 346
Query: 339 WADRAKKK 346
++AK+K
Sbjct: 347 QMEKAKRK 354
>gi|397490153|ref|XP_003816072.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
2 [Pan paniscus]
Length = 535
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 187/312 (59%), Gaps = 4/312 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 28 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 87
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 88 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 147
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 148 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 207
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 208 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 267
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 268 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 327
Query: 341 DRAKKKPKAKEP 352
K K K +P
Sbjct: 328 QMEKAKRKTSKP 339
>gi|348518924|ref|XP_003446981.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Oreochromis niloticus]
Length = 472
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 130/308 (42%), Positives = 194/308 (62%), Gaps = 6/308 (1%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
++VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 60 SDVTHILNSLLDGYDNKLRPDIGVKPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTWYD 119
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG I Y +R
Sbjct: 120 RRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLR 179
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + L+ +P+D +C +E SYGY ++V WK + V + +L QF+ +
Sbjct: 180 LTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSVEVGDIRSWRLYQFSFV 239
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G + +G Y L++ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 240 GLRNTSEIVRTVSGDYVVLTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 299
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD 341
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVFAAL+EY ++Y
Sbjct: 300 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYFV--- 356
Query: 342 RAKKKPKA 349
+ +KP A
Sbjct: 357 -SNRKPSA 363
>gi|324021688|ref|NP_001191195.1| gamma-aminobutyric acid receptor subunit alpha-4 isoform 2 [Homo
sapiens]
gi|332819944|ref|XP_003310456.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Pan troglodytes]
Length = 535
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 187/312 (59%), Gaps = 4/312 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 28 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 87
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 88 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 147
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 148 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 207
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 208 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 267
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 268 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 327
Query: 341 DRAKKKPKAKEP 352
K K K +P
Sbjct: 328 QMEKAKRKTSKP 339
>gi|426231659|ref|XP_004009856.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
1 [Ovis aries]
Length = 555
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 189/308 (61%), Gaps = 6/308 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNV 346
Query: 339 WADRAKKK 346
++AK+K
Sbjct: 347 QMEKAKRK 354
>gi|126337124|ref|XP_001362811.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Monodelphis domestica]
Length = 466
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 135/314 (42%), Positives = 195/314 (62%), Gaps = 7/314 (2%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+VT +++LL YD +LRP+ G P + +D+ + S +S ++M+Y I ++ Q W D
Sbjct: 46 DVTLILNKLLREYDKKLRPDIGLKPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTDS 105
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S ++LTL+ + IW+PDT F N K + H +T N+L+R+ DG I Y +R
Sbjct: 106 RLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRL 165
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA--QLPQFTILG 222
T C + LH +P+D +C + SYGY ++V W++ V ++ +L QF +G
Sbjct: 166 TINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMVYRWRKNSVEAADQKSWRLYQFDFMG 225
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
K + G Y +++ F L R +GYF QTY+P IL V+LSWVSFWI +AT AR
Sbjct: 226 LRNTTEIVKTSAGDYVVMTIYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPAR 285
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADR 342
ALGITTVLTMTT+ST R SLPR+SYV A+D+++ +CF+FVFAAL+EYA +NY Y + R
Sbjct: 286 TALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNY-YSSCR 344
Query: 343 ----AKKKPKAKEP 352
AKKK P
Sbjct: 345 KPNCAKKKKSLMHP 358
>gi|432895803|ref|XP_004076169.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
[Oryzias latipes]
Length = 475
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 189/295 (64%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
++VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 63 SDVTHVLNSLLDGYDNKLRPDIGVKPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTWYD 122
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG I Y +R
Sbjct: 123 RRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLR 182
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + L+ +P+D +C +E SYGY ++V WK + V + +L QF+ +
Sbjct: 183 LTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYRWKRSSVEVGDIRSWRLYQFSFV 242
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G + +G Y L++ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 243 GLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 302
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVFAAL+EY ++Y
Sbjct: 303 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHY 357
>gi|1836080|gb|AAB46866.1| gamma-aminobutyric acid A receptor alpha 4 subunit, GABAA receptor
alpha subunit [human, fetal brain, Peptide, 554 aa]
Length = 554
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 187/312 (59%), Gaps = 4/312 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V ++YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEVEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C V+ SY Y +++ W + P + V E + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPVKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWA 340
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 346
Query: 341 DRAKKKPKAKEP 352
K K K +P
Sbjct: 347 QMEKAKRKTSKP 358
>gi|22652235|gb|AAN03654.1|AF411007_1 gamma-aminobutyric acid A receptor beta 1 subunit [Rana
catesbeiana]
Length = 210
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 163/210 (77%), Gaps = 2/210 (0%)
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTE 145
EV+MDYT+TMY Q W+D RL++S LTL A+++WVPDT+ NDK SF+H VT
Sbjct: 1 EVNMDYTMTMYFQQSWRDKRLSYSGIPLNLTLDNRVADQLWVPDTYIHNDKRSFVHGVTV 60
Query: 146 RNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK-- 203
+N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW
Sbjct: 61 KNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGG 120
Query: 204 ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSIL 263
+ + GVE+ +LPQF+I+ ++ +K +TG+Y RLSLSF+L+RNIGYF+ QTY+PS L
Sbjct: 121 DKAITGVEKIELPQFSIIDYKMVSKKVVFSTGSYPRLSLSFRLKRNIGYFILQTYMPSTL 180
Query: 264 IVMLSWVSFWINHEATSARVALGITTVLTM 293
I +LSWVSFWIN++A++ARVALGITTVLTM
Sbjct: 181 ITILSWVSFWINYDASAARVALGITTVLTM 210
>gi|268573708|ref|XP_002641831.1| Hypothetical protein CBG16500 [Caenorhabditis briggsae]
Length = 454
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/321 (42%), Positives = 199/321 (61%), Gaps = 29/321 (9%)
Query: 45 NVTQTISQLLHGYDIRLRPNFG---------------------------GDPLYVGMDLT 77
NVT+ + +L+ +D R+RPN+G P+ V +
Sbjct: 52 NVTRLLDKLIASHDRRIRPNYGVHAFQKRYSVSKLSRNFLFKCSYCAEKSPPIEVNITAH 111
Query: 78 IASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE-DEVLTLSGDFAEKIWVPDTFFANDK 136
+ + ++SEVSMDYT+ +YL Q WKD RLA+ S+ ++ LT+ D + IW PDTFF N+K
Sbjct: 112 VTTISAVSEVSMDYTLDLYLRQIWKDPRLAWESDVEDSLTIGIDMVKTIWTPDTFFPNEK 171
Query: 137 NSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVL 196
SF H+ T N +R++ G++ +R T T C M LH +PLD Q C +E+ESYGY+
Sbjct: 172 KSFFHEATSHNSFLRIDSHGNVLRSIRLTVTANCPMSLHTFPLDRQECALEVESYGYSTK 231
Query: 197 DVVMYWKETPVRGVEE-AQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVF 255
D++ +W ++E L FTI H +R L+TG Y RL+ F +RNIG+++
Sbjct: 232 DIIYHWHGANAVTIDENVHLAHFTIGEHYHIERTISLSTGNYSRLTAYFMFKRNIGFYLI 291
Query: 256 QTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDI 315
Q Y PS LIV++SWVSFW+N EA ARVA+G+TTVLTMTT+ T +SLP++SYVK++D+
Sbjct: 292 QIYFPSSLIVVISWVSFWLNREAVQARVAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDV 351
Query: 316 YLVMCFVFVFAALLEYAAVNY 336
+L +CF VFA+LLEYAA+ Y
Sbjct: 352 FLGVCFFIVFASLLEYAAIGY 372
>gi|31637|emb|CAA33437.1| GABA-A receptor gamma 2 subunit [Homo sapiens]
gi|226325|prf||1506443A GABAa receptor gamma2
Length = 467
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQMWYD 123
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYSLR 183
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>gi|301763284|ref|XP_002917059.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
[Ailuropoda melanoleuca]
gi|281338654|gb|EFB14238.1| hypothetical protein PANDA_005231 [Ailuropoda melanoleuca]
Length = 555
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 189/308 (61%), Gaps = 6/308 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 VGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 346
Query: 339 WADRAKKK 346
++AK+K
Sbjct: 347 QMEKAKRK 354
>gi|62531075|gb|AAH93254.1| LOC553402 protein, partial [Danio rerio]
Length = 372
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 189/295 (64%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
++VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 61 SDVTHILNSLLDGYDNKLRPDIGVKPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTWYD 120
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG I Y +R
Sbjct: 121 RRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLR 180
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + L+ +P+D +C +E SYGY ++V WK + V + +L QF+ +
Sbjct: 181 LTIDAECQLKLNNFPMDEHSCPLEFSSYGYPKEEIVYKWKRSSVEVGDIRSWRLYQFSFV 240
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G + +G Y L++ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 241 GLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 300
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVFAAL+EY ++Y
Sbjct: 301 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHY 355
>gi|17981007|gb|AAL50804.1|AF453437_1 GABAa receptor gamma2 subunit [Morone americana]
Length = 472
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/308 (42%), Positives = 194/308 (62%), Gaps = 6/308 (1%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
++VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 60 SDVTHILNSLLDGYDNKLRPDIGVKPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTWYD 119
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG I Y +R
Sbjct: 120 RRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLR 179
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + L+ +P+D +C +E SYGY ++V WK + V + +L QF+ +
Sbjct: 180 LTIDAECQLKLNNFPMDEHSCPLEFSSYGYPREEIVYKWKRSSVEVGDIRSWRLYQFSFV 239
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G + +G Y L++ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 240 GLRNTSEIVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 299
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD 341
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVFAAL+EY ++Y
Sbjct: 300 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHYFV--- 356
Query: 342 RAKKKPKA 349
+ +KP A
Sbjct: 357 -SNRKPSA 363
>gi|426231661|ref|XP_004009857.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 isoform
2 [Ovis aries]
Length = 536
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 189/308 (61%), Gaps = 6/308 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 28 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 87
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 88 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 147
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 148 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 207
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 208 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 267
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 268 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNV 327
Query: 339 WADRAKKK 346
++AK+K
Sbjct: 328 QMEKAKRK 335
>gi|335293404|ref|XP_003356954.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 1 [Sus scrofa]
Length = 554
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 189/308 (61%), Gaps = 6/308 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDGLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 346
Query: 339 WADRAKKK 346
++AK+K
Sbjct: 347 QMEKAKRK 354
>gi|372266072|ref|NP_001243179.1| gamma-aminobutyric acid receptor subunit gamma-2 [Danio rerio]
Length = 476
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 189/295 (64%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
++VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 SDVTHILNSLLDGYDNKLRPDIGVKPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG I Y +R
Sbjct: 124 RRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLR 183
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + L+ +P+D +C +E SYGY ++V WK + V + +L QF+ +
Sbjct: 184 LTIDAECQLKLNNFPMDEHSCPLEFSSYGYPKEEIVYKWKRSSVEVGDIRSWRLYQFSFV 243
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G + +G Y L++ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 244 GLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVFAAL+EY ++Y
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTLHY 358
>gi|359321074|ref|XP_539251.3| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4 [Canis
lupus familiaris]
Length = 568
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 189/308 (61%), Gaps = 6/308 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 60 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 119
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 120 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 179
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + V E + L Q+ +
Sbjct: 180 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 239
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 240 VGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 299
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY--SY 338
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY +
Sbjct: 300 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNI 359
Query: 339 WADRAKKK 346
++AK+K
Sbjct: 360 QMEKAKRK 367
>gi|344256890|gb|EGW12994.1| Glycine receptor subunit alpha-4 [Cricetulus griseus]
Length = 455
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 138/289 (47%), Positives = 191/289 (66%), Gaps = 23/289 (7%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +M W D RLA+ D+
Sbjct: 66 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTM-----------WNDPRLAYREYPDDS 114
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 115 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 174
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI-----LGHETND 227
+P+D Q CT+++ES+GYT+ D++ W E V+ E LPQF + LG+ T
Sbjct: 175 KNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCT-- 232
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGI 287
+ TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV LGI
Sbjct: 233 --KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGI 290
Query: 288 TTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
TTVLTMTT S+G R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 291 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 339
>gi|148700392|gb|EDL32339.1| gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2, isoform
CRA_b [Mus musculus]
Length = 393
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 72 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 131
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 132 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 191
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 192 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 251
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 252 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 311
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 312 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 366
>gi|354500347|ref|XP_003512262.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1-like
isoform 2 [Cricetulus griseus]
Length = 466
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 131/315 (41%), Positives = 194/315 (61%), Gaps = 4/315 (1%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
++TQ ++ LL GYD +LRP+ G P + D+ + S + ++M+YTI + Q W D
Sbjct: 61 GDITQILNSLLQGYDNKLRPDIGVRPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 120
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N + S H +T N+L+R+ DG + Y +R
Sbjct: 121 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLR 180
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA--QLPQFTIL 221
T C + LH +P+D +C +E SYGY ++ WK+ V + +L QF +
Sbjct: 181 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 240
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G + +G Y +++ F L R +GYF QTY+P IL V+LSWVSFWIN +A A
Sbjct: 241 GLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 300
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD 341
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVFAAL+EY ++Y +
Sbjct: 301 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFTSNN 360
Query: 342 RAK--KKPKAKEPTP 354
+ K + K K P+P
Sbjct: 361 KGKTTRHRKHKNPSP 375
>gi|344298013|ref|XP_003420689.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Loxodonta africana]
Length = 466
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 197/320 (61%), Gaps = 7/320 (2%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTI 78
E + +S ++K L K T +VT +++LL YD +LRP+ G P + +D+ +
Sbjct: 24 EDEYEDSSNQKWVLAPKSQDT-----DVTLILNKLLREYDKKLRPDIGIKPTVIDVDIYV 78
Query: 79 ASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNS 138
S +S ++M+Y I ++ Q W D RL F+S ++LTL+ + IW+PDT F N K +
Sbjct: 79 NSIGPVSSINMEYQIDIFFAQTWTDTRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTA 138
Query: 139 FLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDV 198
H +T N+L+R+ DG I Y +R T C + LH +P+D +C + SYGY ++
Sbjct: 139 EAHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEM 198
Query: 199 VMYWKETPVRGVEEA--QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQ 256
+ W++ V ++ +L QF +G + G Y +++ F+L R +GYF Q
Sbjct: 199 IYRWRKNSVEAADQKSWRLYQFDFMGLRNTTETVTTSAGDYVVMTIYFELSRRMGYFTIQ 258
Query: 257 TYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIY 316
TY+P IL V+LSWVSFWI +AT AR ALGITTVLTMTT+ST R SLPR+SYV A+D++
Sbjct: 259 TYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLF 318
Query: 317 LVMCFVFVFAALLEYAAVNY 336
+ +CF+FVFAAL+EYA +NY
Sbjct: 319 VTVCFLFVFAALMEYATLNY 338
>gi|335293406|ref|XP_003356955.1| PREDICTED: gamma-aminobutyric acid receptor subunit alpha-4-like
isoform 2 [Sus scrofa]
Length = 535
Score = 267 bits (683), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 138/334 (41%), Positives = 197/334 (58%), Gaps = 17/334 (5%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTI 78
ES N EKL C + N T+ + LL GYD RLRP FGG V D+ +
Sbjct: 13 ESPGPNQKEEKL--CPE---------NFTRILDGLLDGYDNRLRPGFGGPVTEVKTDIYV 61
Query: 79 ASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNS 138
SF +S+V M+YT+ ++ Q W D RL + E+L L+ K+W PDTFF N K S
Sbjct: 62 TSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKS 121
Query: 139 FLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDV 198
H++T NKL R+ +G+I Y MR T + C M L +P+D C ++ SY Y ++
Sbjct: 122 VSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEM 181
Query: 199 VMYWKETPVRGV----EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFV 254
+ W + P + V E + L Q+ ++G + K TG Y +++ F L+R +GYF+
Sbjct: 182 IYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFM 241
Query: 255 FQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAID 314
QTY+P I+ V+LS VSFWIN E+ AR GITTVLTMTT+S R SLP++SY A+D
Sbjct: 242 IQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMD 301
Query: 315 IYLVMCFVFVFAALLEYAAVNY--SYWADRAKKK 346
++ +CF FVF+AL+E+AAVNY + ++AK+K
Sbjct: 302 WFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKRK 335
>gi|403284721|ref|XP_003933706.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-1
[Saimiri boliviensis boliviensis]
Length = 465
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 129/311 (41%), Positives = 191/311 (61%), Gaps = 2/311 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
++TQ ++ LL GYD +LRP+ G P + D+ + S + ++M+YTI + Q W D
Sbjct: 62 GDITQILNSLLQGYDNKLRPDIGVRPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFD 121
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N + S H +T N+L+R+ DG + Y +R
Sbjct: 122 SRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLR 181
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA--QLPQFTIL 221
T C + LH +P+D +C +E SYGY ++ WK+ V + +L QF +
Sbjct: 182 LTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFV 241
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G + +G Y +++ F L R +GYF QTY+P IL V+LSWVSFWIN +A A
Sbjct: 242 GLRNSTEISHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPA 301
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWAD 341
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVFAAL+EY ++Y
Sbjct: 302 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFTSNK 361
Query: 342 RAKKKPKAKEP 352
R + K ++P
Sbjct: 362 RGRTTTKDRKP 372
>gi|344265230|ref|XP_003404688.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Loxodonta africana]
Length = 475
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>gi|73953524|ref|XP_867037.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
5 [Canis lupus familiaris]
Length = 475
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>gi|26340598|dbj|BAC33961.1| unnamed protein product [Mus musculus]
Length = 384
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 63 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 122
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 123 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 182
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 183 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 242
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 243 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 302
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 303 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 357
>gi|62955617|ref|NP_001017822.1| gamma-aminobutyric acid receptor subunit alpha-4 [Danio rerio]
gi|62202172|gb|AAH92794.1| Zgc:110204 [Danio rerio]
gi|182889054|gb|AAI64581.1| Zgc:110204 protein [Danio rerio]
Length = 557
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 127/296 (42%), Positives = 183/296 (61%), Gaps = 4/296 (1%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + +LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDRLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDR 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T N+L R+ +G+I Y MR
Sbjct: 107 RLRYEGPVEILRLNNLMVTKVWTPDTFFRNGKRSVAHNMTAPNRLFRIMKNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D +C ++ SY Y +++ W + P V E + L Q+ +
Sbjct: 167 TISAECPMRLVNFPMDGHSCPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETVKSITGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR GITTVLTMTT+S R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 342
>gi|6679915|ref|NP_032099.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 1
precursor [Mus musculus]
gi|20141351|sp|P22723.3|GBRG2_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|14626496|gb|AAK71573.1|AF233775_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626500|gb|AAK71575.1|AF233777_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626510|gb|AAK71580.1|AF233782_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626514|gb|AAK71582.1|AF233784_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626520|gb|AAK71585.1|AF233787_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626522|gb|AAK71586.1|AF233788_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626524|gb|AAK71587.1|AF233789_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626526|gb|AAK71588.1|AF233790_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626528|gb|AAK71589.1|AF233791_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626536|gb|AAK71593.1|AF233795_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626542|gb|AAK71596.1|AF233798_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626546|gb|AAK71598.1|AF233800_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626548|gb|AAK71599.1|AF233801_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|193404|gb|AAA37653.1| GABA-alpha receptor gamma-2 subunit [Mus musculus]
gi|21619326|gb|AAH31762.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2 [Mus
musculus]
gi|148700391|gb|EDL32338.1| gamma-aminobutyric acid (GABA-A) receptor, subunit gamma 2, isoform
CRA_a [Mus musculus]
Length = 474
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 63 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 122
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 123 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 182
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 183 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 242
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 243 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 302
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 303 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 357
>gi|395817118|ref|XP_003782022.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 1 [Otolemur garnettii]
Length = 475
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>gi|363728960|ref|XP_001233421.2| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3 [Gallus
gallus]
Length = 456
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 131/312 (41%), Positives = 193/312 (61%), Gaps = 3/312 (0%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+VT +++LL YD +LRP+ G P + +D+ + S +S ++M+Y I ++ Q W D
Sbjct: 46 DVTLILNKLLREYDKKLRPDIGLKPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTDS 105
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S ++LTL+ + IW+PDT F N K + H +T N+L+R+ DG I Y +R
Sbjct: 106 RLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRL 165
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA--QLPQFTILG 222
T C + LH +P+D +C + SYGY +++ W++ V ++ +L QF +G
Sbjct: 166 TINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFMG 225
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ G Y +++ F L R +GYF QTY+P IL V+LSWVSFWI +AT AR
Sbjct: 226 LRNTSEIVNTSAGDYVVMTIYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPAR 285
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADR 342
ALGITTVLTMTT+ST R SLPR+SYV A+D+++ +CF+FVFAAL+EYA +NY Y + R
Sbjct: 286 TALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNY-YSSCR 344
Query: 343 AKKKPKAKEPTP 354
K K+ P
Sbjct: 345 KPNCTKKKKSLP 356
>gi|348575247|ref|XP_003473401.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 1 [Cavia porcellus]
Length = 475
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>gi|224043002|ref|XP_002197411.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-3
[Taeniopygia guttata]
Length = 446
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/294 (43%), Positives = 187/294 (63%), Gaps = 2/294 (0%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+VT +++LL YD +LRP+ G P + +D+ + S +S ++M+Y I ++ Q W D
Sbjct: 46 DVTLILNKLLREYDKKLRPDIGIKPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTDS 105
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S ++LTL+ + IW+PDT F N K + H +T N+L+R+ DG I Y +R
Sbjct: 106 RLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRL 165
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA--QLPQFTILG 222
T C + LH +P+D +C + SYGY +++ W++ V ++ +L QF +G
Sbjct: 166 TINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFMG 225
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
K + G Y +++ F L R +GYF QTY+P IL V+LSWVSFWI +AT AR
Sbjct: 226 LRNTSEIVKTSAGDYVVMTIYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPAR 285
Query: 283 VALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ALGITTVLTMTT+ST R SLPR+SYV A+D+++ +CF+FVFAAL+EYA +NY
Sbjct: 286 TALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNY 339
>gi|410949358|ref|XP_003981390.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Felis catus]
Length = 475
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>gi|57085659|ref|XP_546259.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Canis lupus familiaris]
Length = 467
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>gi|38788155|ref|NP_944494.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 1
precursor [Homo sapiens]
gi|332238953|ref|XP_003268667.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Nomascus leucogenys]
gi|397473094|ref|XP_003808055.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Pan paniscus]
gi|426350892|ref|XP_004042997.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Gorilla gorilla gorilla]
gi|119581936|gb|EAW61532.1| gamma-aminobutyric acid (GABA) A receptor, gamma 2, isoform CRA_a
[Homo sapiens]
gi|380783785|gb|AFE63768.1| gamma-aminobutyric acid receptor subunit gamma-2 isoform 1
precursor [Macaca mulatta]
Length = 475
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>gi|395505014|ref|XP_003756841.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
1 [Sarcophilus harrisii]
Length = 475
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 188/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 GDVTFILNGLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPQEEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F+L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFELSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>gi|46371159|gb|AAS90348.1| GABA-A gamma2 long isoform [Rattus norvegicus]
gi|149052302|gb|EDM04119.1| gamma-aminobutyric acid A receptor, gamma 2 [Rattus norvegicus]
Length = 474
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 63 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 122
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 123 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 182
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 183 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 242
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 243 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 302
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 303 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 357
>gi|395817120|ref|XP_003782023.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2-like
isoform 2 [Otolemur garnettii]
Length = 467
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>gi|431918113|gb|ELK17341.1| Gamma-aminobutyric acid receptor subunit gamma-2 [Pteropus alecto]
Length = 467
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>gi|344265232|ref|XP_003404689.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Loxodonta africana]
Length = 467
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>gi|395505016|ref|XP_003756842.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Sarcophilus harrisii]
Length = 467
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 188/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 GDVTFILNGLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPQEEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F+L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFELSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>gi|189092755|gb|ACD75818.1| gamma-aminobutyric acid A receptor gamma 2 [Felis catus]
Length = 453
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 50 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 109
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 110 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 169
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 170 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 229
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 230 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 289
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 290 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 344
>gi|410949360|ref|XP_003981391.1| PREDICTED: gamma-aminobutyric acid receptor subunit gamma-2 isoform
2 [Felis catus]
Length = 467
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 123
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 124 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 183
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 184 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 243
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 244 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 303
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 304 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>gi|26338570|dbj|BAC32956.1| unnamed protein product [Mus musculus]
Length = 453
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 42 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 101
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 102 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 161
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 162 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 221
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 222 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 281
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 282 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 336
>gi|14626498|gb|AAK71574.1|AF233776_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626502|gb|AAK71576.1|AF233778_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626504|gb|AAK71577.1|AF233779_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626506|gb|AAK71578.1|AF233780_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626508|gb|AAK71579.1|AF233781_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626512|gb|AAK71581.1|AF233783_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626516|gb|AAK71583.1|AF233785_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626518|gb|AAK71584.1|AF233786_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626530|gb|AAK71590.1|AF233792_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626532|gb|AAK71591.1|AF233793_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626534|gb|AAK71592.1|AF233794_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626538|gb|AAK71594.1|AF233796_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626540|gb|AAK71595.1|AF233797_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626544|gb|AAK71597.1|AF233799_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
gi|14626550|gb|AAK71600.1|AF233802_1 GABA(A) receptor gamma 2 subunit [Mus musculus]
Length = 474
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 63 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 122
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 123 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 182
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 183 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 242
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 243 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 302
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 303 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 357
>gi|34328527|ref|NP_899156.1| gamma-aminobutyric acid receptor subunit gamma-2 precursor [Rattus
norvegicus]
gi|120788|sp|P18508.1|GBRG2_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-2;
AltName: Full=GABA(A) receptor subunit gamma-2; Flags:
Precursor
gi|204218|gb|AAC42036.1| GABA-A receptor gamma-2 subunit [Rattus norvegicus]
Length = 466
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 63 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 122
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 123 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 182
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 183 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 242
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 243 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 302
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 303 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 357
>gi|193406|gb|AAB59635.1| gamma-aminobutyric acid A receptor gamma-2 subunit [Mus musculus]
Length = 466
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 63 GDVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYD 122
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 123 RRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLR 182
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTIL 221
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +
Sbjct: 183 LTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFV 242
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
G K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A A
Sbjct: 243 GLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPA 302
Query: 282 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R +LGITTVLTMTT+ST R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 303 RTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 357
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,539,751,958
Number of Sequences: 23463169
Number of extensions: 219156526
Number of successful extensions: 529548
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3189
Number of HSP's successfully gapped in prelim test: 2794
Number of HSP's that attempted gapping in prelim test: 518729
Number of HSP's gapped (non-prelim): 6653
length of query: 365
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 221
effective length of database: 8,980,499,031
effective search space: 1984690285851
effective search space used: 1984690285851
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)