Your job contains 1 sequence.
>psy5812
MSELQIIRIPDFNSENELESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIR
LRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGD
FAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLD
NQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRL
SLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGV
RSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADRAKKKPKAKEPTPLGNYIR
LCIFS
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5812
(365 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0010240 - symbol:Lcch3 "Ligand-gated chloride chan... 1343 3.6e-137 1
WB|WBGene00001512 - symbol:gab-1 species:6239 "Caenorhabd... 1040 4.6e-105 1
UNIPROTKB|F5H7N0 - symbol:GABRB3 "Gamma-aminobutyric acid... 929 2.7e-93 1
UNIPROTKB|P28472 - symbol:GABRB3 "Gamma-aminobutyric acid... 929 2.7e-93 1
MGI|MGI:95621 - symbol:Gabrb3 "gamma-aminobutyric acid (G... 929 2.7e-93 1
RGD|2651 - symbol:Gabrb3 "gamma-aminobutyric acid (GABA) ... 929 2.7e-93 1
ZFIN|ZDB-GENE-101102-2 - symbol:gabrb3 "gamma-aminobutyri... 929 2.7e-93 1
UNIPROTKB|P24045 - symbol:GABRB4 "Gamma-aminobutyric acid... 920 2.4e-92 1
UNIPROTKB|P19019 - symbol:GABRB3 "Gamma-aminobutyric acid... 918 3.9e-92 1
ZFIN|ZDB-GENE-070424-211 - symbol:si:dkey-169l5.3 "si:dke... 916 6.3e-92 1
MGI|MGI:95619 - symbol:Gabrb1 "gamma-aminobutyric acid (G... 914 1.0e-91 1
RGD|2649 - symbol:Gabrb1 "gamma-aminobutyric acid (GABA) ... 914 1.0e-91 1
UNIPROTKB|P08220 - symbol:GABRB1 "Gamma-aminobutyric acid... 911 2.1e-91 1
UNIPROTKB|P18505 - symbol:GABRB1 "Gamma-aminobutyric acid... 911 2.1e-91 1
ZFIN|ZDB-GENE-090313-230 - symbol:si:dkey-20i10.4 "si:dke... 911 2.1e-91 1
ZFIN|ZDB-GENE-111215-5 - symbol:gabrb2l "gamma-aminobutyr... 911 2.1e-91 1
UNIPROTKB|P0C2W5 - symbol:GABRB2 "Gamma-aminobutyric acid... 910 2.7e-91 1
UNIPROTKB|L7N0C0 - symbol:GABRB2 "Uncharacterized protein... 910 2.7e-91 1
UNIPROTKB|P47870 - symbol:GABRB2 "Gamma-aminobutyric acid... 910 2.7e-91 1
MGI|MGI:95620 - symbol:Gabrb2 "gamma-aminobutyric acid (G... 910 2.7e-91 1
RGD|2650 - symbol:Gabrb2 "gamma-aminobutyric acid (GABA) ... 910 2.7e-91 1
UNIPROTKB|F1NES7 - symbol:LOC100858201 "Uncharacterized p... 907 5.7e-91 1
ZFIN|ZDB-GENE-030131-8196 - symbol:gabrb2 "gamma-aminobut... 905 9.3e-91 1
UNIPROTKB|F1NB54 - symbol:GABRB2 "Uncharacterized protein... 904 1.2e-90 1
UNIPROTKB|Q90590 - symbol:GABARB "Uncharacterized protein... 904 1.2e-90 1
UNIPROTKB|E1BFC0 - symbol:GABRB2 "Gamma-aminobutyric acid... 835 2.4e-83 1
UNIPROTKB|J9P3X1 - symbol:GABRB3 "Uncharacterized protein... 830 8.2e-83 1
UNIPROTKB|E7EV50 - symbol:GABRB2 "Gamma-aminobutyric acid... 808 1.8e-80 1
UNIPROTKB|F1LRQ0 - symbol:Gabrb3 "Gamma-aminobutyric acid... 803 6.0e-80 1
UNIPROTKB|F1MAU5 - symbol:GABRB3 "Uncharacterized protein... 784 6.2e-78 1
UNIPROTKB|E1BW41 - symbol:LOC100858201 "Uncharacterized p... 778 2.7e-77 1
UNIPROTKB|F5GXV5 - symbol:GABRB1 "Gamma-aminobutyric acid... 769 2.4e-76 1
UNIPROTKB|E2QVJ3 - symbol:GABRQ "Uncharacterized protein"... 767 3.9e-76 1
UNIPROTKB|F6XRX3 - symbol:GABRQ "Uncharacterized protein"... 767 3.9e-76 1
UNIPROTKB|F5H3D2 - symbol:GABRB3 "Gamma-aminobutyric acid... 759 2.7e-75 1
UNIPROTKB|F1PEG2 - symbol:GABRB1 "Uncharacterized protein... 742 1.7e-73 1
UNIPROTKB|E1BQL4 - symbol:GABRD "Uncharacterized protein"... 720 2.5e-73 2
UNIPROTKB|E1BJH4 - symbol:GABRQ "Uncharacterized protein"... 740 2.8e-73 1
UNIPROTKB|F1S2D2 - symbol:GABRQ "Uncharacterized protein"... 737 5.9e-73 1
UNIPROTKB|K7GR83 - symbol:GABRQ "Uncharacterized protein"... 737 5.9e-73 1
UNIPROTKB|O14764 - symbol:GABRD "Gamma-aminobutyric acid ... 711 1.1e-72 2
UNIPROTKB|G3V875 - symbol:Gabrq "Gamma-aminobutyric acid ... 733 1.6e-72 1
UNIPROTKB|E2R3M6 - symbol:GABRD "Uncharacterized protein"... 711 1.8e-72 2
UNIPROTKB|Q9UN88 - symbol:GABRQ "Gamma-aminobutyric acid ... 732 2.0e-72 1
MGI|MGI:1888498 - symbol:Gabrq "gamma-aminobutyric acid (... 730 3.2e-72 1
UNIPROTKB|A2VE38 - symbol:GABRD "Gamma-aminobutyric acid ... 704 6.0e-72 2
WB|WBGene00017389 - symbol:lgc-38 species:6239 "Caenorhab... 724 1.4e-71 1
UNIPROTKB|E1C7Q7 - symbol:E1C7Q7 "Uncharacterized protein... 721 2.9e-71 1
ZFIN|ZDB-GENE-080303-26 - symbol:zgc:171544 "zgc:171544" ... 721 2.9e-71 1
UNIPROTKB|F1Q344 - symbol:GABRD "Uncharacterized protein"... 625 3.7e-71 3
UNIPROTKB|Q9BLY8 - symbol:Rdl "Gamma-aminobutyric acid re... 719 4.8e-71 1
FB|FBgn0004244 - symbol:Rdl "Resistant to dieldrin" speci... 717 7.7e-71 1
UNIPROTKB|Q75NA5 - symbol:Rdl "Gamma-aminobutyric acid re... 717 7.7e-71 1
MGI|MGI:95622 - symbol:Gabrd "gamma-aminobutyric acid (GA... 714 1.6e-70 1
UNIPROTKB|I3LKA9 - symbol:GABRR2 "Uncharacterized protein... 713 2.1e-70 1
RGD|61901 - symbol:Gabrd "gamma-aminobutyric acid (GABA) ... 713 2.1e-70 1
MGI|MGI:95626 - symbol:Gabrr2 "gamma-aminobutyric acid (G... 710 4.3e-70 1
RGD|61902 - symbol:Gabrr2 "gamma-aminobutyric acid (GABA)... 709 5.5e-70 1
UNIPROTKB|Q0II76 - symbol:GABRR2 "Gamma-aminobutyric acid... 708 7.0e-70 1
UNIPROTKB|P28476 - symbol:GABRR2 "Gamma-aminobutyric acid... 707 8.9e-70 1
ZFIN|ZDB-GENE-081105-170 - symbol:gabrd "gamma-aminobutyr... 683 1.2e-69 2
ZFIN|ZDB-GENE-081028-62 - symbol:gabrp "gamma-aminobutyri... 705 1.4e-69 1
UNIPROTKB|E2R4R0 - symbol:GABRR2 "Uncharacterized protein... 703 2.4e-69 1
MGI|MGI:95625 - symbol:Gabrr1 "gamma-aminobutyric acid (G... 702 3.0e-69 1
RGD|61900 - symbol:Gabrr1 "gamma-aminobutyric acid (GABA)... 702 3.0e-69 1
UNIPROTKB|P50572 - symbol:Gabrr1 "Gamma-aminobutyric acid... 702 3.0e-69 1
UNIPROTKB|F1ND89 - symbol:GABRR1 "Uncharacterized protein... 701 3.8e-69 1
UNIPROTKB|F1ND90 - symbol:GABRR2 "Uncharacterized protein... 699 6.3e-69 1
UNIPROTKB|P24046 - symbol:GABRR1 "Gamma-aminobutyric acid... 699 6.3e-69 1
ZFIN|ZDB-GENE-060825-164 - symbol:gabrr2a "gamma-aminobut... 699 6.3e-69 1
UNIPROTKB|E1BCQ5 - symbol:GABRR1 "Uncharacterized protein... 697 1.0e-68 1
UNIPROTKB|F1S0D1 - symbol:GABRR1 "Uncharacterized protein... 697 1.0e-68 1
ZFIN|ZDB-GENE-040724-212 - symbol:gabrr1 "gamma-aminobuty... 697 1.0e-68 1
ZFIN|ZDB-GENE-041014-174 - symbol:gabrr2b "gamma-aminobut... 693 2.7e-68 1
UNIPROTKB|G5E5K0 - symbol:GLRA2 "Uncharacterized protein"... 692 3.5e-68 1
UNIPROTKB|E2QZJ3 - symbol:GLRA2 "Uncharacterized protein"... 691 4.4e-68 1
UNIPROTKB|F6Y3F7 - symbol:GLRA2 "Uncharacterized protein"... 691 4.4e-68 1
UNIPROTKB|P23416 - symbol:GLRA2 "Glycine receptor subunit... 691 4.4e-68 1
MGI|MGI:95748 - symbol:Glra2 "glycine receptor, alpha 2 s... 691 4.4e-68 1
UNIPROTKB|E1BTB5 - symbol:GLRA2 "Uncharacterized protein"... 690 5.6e-68 1
UNIPROTKB|B7ZBQ7 - symbol:GABRR1 "Gamma-aminobutyric acid... 689 7.2e-68 1
UNIPROTKB|F1NY45 - symbol:GABRP "Uncharacterized protein"... 687 1.2e-67 1
UNIPROTKB|Q5EA06 - symbol:GABRP "Gamma-aminobutyric acid ... 685 1.9e-67 1
UNIPROTKB|F1RRX8 - symbol:GABRP "Uncharacterized protein"... 685 1.9e-67 1
ZFIN|ZDB-GENE-080722-20 - symbol:zgc:194845 "zgc:194845" ... 685 1.9e-67 1
ZFIN|ZDB-GENE-020402-1 - symbol:glra3 "glycine receptor, ... 684 2.4e-67 1
UNIPROTKB|E2R7P3 - symbol:GLRA3 "Uncharacterized protein"... 683 3.1e-67 1
UNIPROTKB|F1Q2X8 - symbol:GLRA3 "Uncharacterized protein"... 683 3.1e-67 1
UNIPROTKB|J9P291 - symbol:GLRA3 "Uncharacterized protein"... 683 3.1e-67 1
UNIPROTKB|O75311 - symbol:GLRA3 "Glycine receptor subunit... 683 3.1e-67 1
MGI|MGI:95749 - symbol:Glra3 "glycine receptor, alpha 3 s... 683 3.1e-67 1
RGD|2705 - symbol:Glra2 "glycine receptor, alpha 2" speci... 683 3.1e-67 1
RGD|621229 - symbol:Glra3 "glycine receptor, alpha 3" spe... 683 3.1e-67 1
UNIPROTKB|P22771 - symbol:Glra2 "Glycine receptor subunit... 683 3.1e-67 1
UNIPROTKB|E5RI57 - symbol:GABRP "Gamma-aminobutyric acid ... 677 1.3e-66 1
UNIPROTKB|O00591 - symbol:GABRP "Gamma-aminobutyric acid ... 677 1.3e-66 1
UNIPROTKB|F1MBQ3 - symbol:GABRR2 "Gamma-aminobutyric acid... 676 1.7e-66 1
UNIPROTKB|G5E635 - symbol:GABRR2 "Gamma-aminobutyric acid... 676 1.7e-66 1
UNIPROTKB|E2RS87 - symbol:GABRP "Uncharacterized protein"... 676 1.7e-66 1
UNIPROTKB|F1RQB7 - symbol:GLRA1 "Uncharacterized protein"... 675 2.2e-66 1
WARNING: Descriptions of 512 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0010240 [details] [associations]
symbol:Lcch3 "Ligand-gated chloride channel homolog 3"
species:7227 "Drosophila melanogaster" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0004890 "GABA-A receptor activity"
evidence=NAS;IDA] [GO:0016021 "integral to membrane"
evidence=IEA;NAS] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:AE014298 GO:GO:0034707 GO:GO:0005254
eggNOG:NOG77438 GeneTree:ENSGT00630000089685 KO:K05181 EMBL:L17436
EMBL:S62717 EMBL:AY060660 PIR:JN0603 RefSeq:NP_996469.1
UniGene:Dm.6661 ProteinModelPortal:Q08832 SMR:Q08832 STRING:Q08832
EnsemblMetazoa:FBtr0074129 GeneID:32554 KEGG:dme:Dmel_CG17336
CTD:32554 FlyBase:FBgn0010240 InParanoid:Q08832 OMA:ERSETCS
OrthoDB:EOG444J1S PhylomeDB:Q08832 ChiTaRS:Lcch3 GenomeRNAi:32554
NextBio:779108 Bgee:Q08832 GermOnline:CG17336 Uniprot:Q08832
Length = 496
Score = 1343 (477.8 bits), Expect = 3.6e-137, P = 3.6e-137
Identities = 259/322 (80%), Positives = 278/322 (86%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C +K RL NVTQTIS +L GYDIRLRPNFGG+PL+VGMDLTIASFD+ISEV+MDYT
Sbjct: 27 CIRKDVLAGRLENVTQTISNILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYT 86
Query: 93 ITMYLNQYWKDDRLAFSS-----EDE-------VLTLSGDFAEKIWVPDTFFANDKNSFL 140
ITMYLNQYW+D+RLAF+ +DE VLTLSGDFAEKIWVPDTFFANDKNSFL
Sbjct: 87 ITMYLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFL 146
Query: 141 HDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVM 200
HDVTERNKLVRL GDG++TYGMRFTTTLACMMDLHYYPLD+QNCTVEIESYGYTV DVVM
Sbjct: 147 HDVTERNKLVRLGGDGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVM 206
Query: 201 YWKETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
YWK TPVRGVE+A+LPQFTI+G+ETNDRKE+LATG YQRLSLSFKLQRNIGYFVFQTYLP
Sbjct: 207 YWKPTPVRGVEDAELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLP 266
Query: 261 SILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMC 320
SILIVMLSWVSFWINHEATSARVA RSSLPRISYVKAIDIYLVMC
Sbjct: 267 SILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMC 326
Query: 321 FVFVFAALLEYAAVNYSYWADR 342
FVFVFAALLEYAAVNY+YW R
Sbjct: 327 FVFVFAALLEYAAVNYTYWGKR 348
>WB|WBGene00001512 [details] [associations]
symbol:gab-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0004890 "GABA-A
receptor activity" evidence=IEA;IDA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA;IDA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=ISS] [GO:0045202 "synapse" evidence=IC] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0045202
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
EMBL:AF498370 EMBL:Z93397 PIR:T27614 RefSeq:NP_499661.2 HSSP:P23415
ProteinModelPortal:O18276 SMR:O18276 PaxDb:O18276
EnsemblMetazoa:ZC482.1 GeneID:176691 KEGG:cel:CELE_ZC482.1
UCSC:ZC482.1 CTD:176691 WormBase:ZC482.1 InParanoid:O18276
OMA:HEVTERN NextBio:893616 Uniprot:O18276
Length = 550
Score = 1040 (371.2 bits), Expect = 4.6e-105, P = 4.6e-105
Identities = 201/320 (62%), Positives = 243/320 (75%)
Query: 24 NSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDS 83
NS S+++ + T +N + +S LL YDIRLRP FGGD L + MD+ IASFDS
Sbjct: 33 NSTSDQMSSSWSNRSQT-MYSNASSLLSDLLLDYDIRLRPGFGGDALLLTMDIIIASFDS 91
Query: 84 ISEVSMDYTITMYLNQYWKDDRLAFSSE---DEVLTLSGDFAEKIWVPDTFFANDKNSFL 140
ISEV MDYT+TMYL+QYW D+RL +S+E DE +TLSG+F++ IWVPDTF ANDK+S+L
Sbjct: 92 ISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDE-MTLSGEFSQNIWVPDTFLANDKHSYL 150
Query: 141 HDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVM 200
H+VTERNK++R+N DG + YGMR T+TL+C M+L +PLD+QNCTVEIESYGYT +V+M
Sbjct: 151 HEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLM 210
Query: 201 YWK-ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYL 259
W V GVE+A +PQFTI G T D ATG+YQRLSL F+L+R++GYF+FQTYL
Sbjct: 211 KWNYPLAVHGVEQADVPQFTITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFQTYL 270
Query: 260 PSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVM 319
P +LIVMLSWVSFWINHEATSARVA R SLPRISYVK+IDIYLVM
Sbjct: 271 PCVLIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVM 330
Query: 320 CFVFVFAALLEYAAVNYSYW 339
CFVFVFAALLEYAAVNYSYW
Sbjct: 331 CFVFVFAALLEYAAVNYSYW 350
>UNIPROTKB|F5H7N0 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4083 ChiTaRS:GABRB3
EMBL:AC009878 EMBL:AC011196 EMBL:AC104569 EMBL:AC127511
EMBL:AC135999 EMBL:AC145167 EMBL:AC145196 EMBL:EU606048
IPI:IPI00470817 ProteinModelPortal:F5H7N0 SMR:F5H7N0
Ensembl:ENST00000541819 UCSC:uc001zbb.3 OMA:FYAIYET
ArrayExpress:F5H7N0 Bgee:F5H7N0 Uniprot:F5H7N0
Length = 529
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 172/296 (58%), Positives = 219/296 (73%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 93 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 152
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 153 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 212
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 213 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 272
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 273 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 332
Query: 284 AXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
A R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 333 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFF 388
>UNIPROTKB|P28472 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0060119 "inner ear
receptor cell development" evidence=IEA] [GO:0060384 "innervation"
evidence=IEA] [GO:0090102 "cochlea development" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005887 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 Orphanet:106 Orphanet:64280
DrugBank:DB00683 HOVERGEN:HBG051707 DrugBank:DB00189
DrugBank:DB00690 eggNOG:NOG77438 KO:K05181 OrthoDB:EOG45756F
CTD:2562 EMBL:M82919 EMBL:BC010641 EMBL:L04311 IPI:IPI00003467
IPI:IPI00217235 PIR:A55275 PIR:B45468 RefSeq:NP_000805.1
RefSeq:NP_001178249.1 RefSeq:NP_001178250.1 RefSeq:NP_068712.1
UniGene:Hs.302352 ProteinModelPortal:P28472 SMR:P28472
IntAct:P28472 STRING:P28472 PhosphoSite:P28472 DMDM:120773
PaxDb:P28472 PRIDE:P28472 DNASU:2562 Ensembl:ENST00000299267
Ensembl:ENST00000311550 GeneID:2562 KEGG:hsa:2562 UCSC:uc001zaz.3
UCSC:uc001zba.3 GeneCards:GC15M026788 HGNC:HGNC:4083 MIM:137192
MIM:612269 neXtProt:NX_P28472 PharmGKB:PA28497 PhylomeDB:P28472
BindingDB:P28472 ChEMBL:CHEMBL1847 ChiTaRS:GABRB3 GenomeRNAi:2562
NextBio:10121 ArrayExpress:P28472 Bgee:P28472 CleanEx:HS_GABRB3
Genevestigator:P28472 GermOnline:ENSG00000166206 Uniprot:P28472
Length = 473
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 172/296 (58%), Positives = 219/296 (73%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 37 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 96
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 97 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 216
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 217 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 276
Query: 284 AXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
A R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 277 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFF 332
>MGI|MGI:95621 [details] [associations]
symbol:Gabrb3 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 3" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0035612 "AP-2 adaptor complex binding" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048666 "neuron development" evidence=IMP] [GO:0051932
"synaptic transmission, GABAergic" evidence=ISO] [GO:0060077
"inhibitory synapse" evidence=ISO] [GO:0060119 "inner ear receptor
cell development" evidence=IMP] [GO:0060384 "innervation"
evidence=IMP] [GO:0090102 "cochlea development" evidence=IMP]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 MGI:MGI:95621 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007605
GO:GO:0034707 GO:GO:0005254 GO:GO:0090102 GO:GO:0060119
HOVERGEN:HBG051707 GO:GO:0060384 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F CTD:2562 ChiTaRS:GABRB3 EMBL:U14420 EMBL:AK039070
EMBL:AK147247 IPI:IPI00130546 PIR:S53532 RefSeq:NP_032097.1
UniGene:Mm.8004 ProteinModelPortal:P63080 SMR:P63080 STRING:P63080
PaxDb:P63080 PRIDE:P63080 DNASU:14402 Ensembl:ENSMUST00000039697
GeneID:14402 KEGG:mmu:14402 UCSC:uc011xte.1 BindingDB:P63080
ChEMBL:CHEMBL4231 NextBio:285953 Bgee:P63080 Genevestigator:P63080
GermOnline:ENSMUSG00000033676 Uniprot:P63080
Length = 473
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 172/296 (58%), Positives = 219/296 (73%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 37 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 96
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 97 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 216
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 217 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 276
Query: 284 AXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
A R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 277 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFF 332
>RGD|2651 [details] [associations]
symbol:Gabrb3 "gamma-aminobutyric acid (GABA) A receptor, beta 3"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA;TAS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0035612 "AP-2 adaptor complex binding" evidence=IPI] [GO:0043195
"terminal bouton" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0048666 "neuron development" evidence=ISO]
[GO:0051932 "synaptic transmission, GABAergic" evidence=IDA]
[GO:0060077 "inhibitory synapse" evidence=IDA] [GO:0060119 "inner ear
receptor cell development" evidence=ISO] [GO:0060384 "innervation"
evidence=ISO] [GO:0090102 "cochlea development" evidence=ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160
PROSITE:PS00236 RGD:2651 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043195
GO:GO:0034707 GO:GO:0005254 GO:GO:0051932 HOVERGEN:HBG051707
eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181 CTD:2562 EMBL:X15468
EMBL:L04310 IPI:IPI00327083 PIR:S04466 RefSeq:NP_058761.1
UniGene:Rn.208228 ProteinModelPortal:P63079 SMR:P63079 IntAct:P63079
STRING:P63079 PRIDE:P63079 GeneID:24922 KEGG:rno:24922 UCSC:RGD:2651
InParanoid:P63079 BindingDB:P63079 ChEMBL:CHEMBL316 NextBio:604867
ArrayExpress:P63079 Genevestigator:P63079
GermOnline:ENSRNOG00000014938 GO:GO:0060077 Uniprot:P63079
Length = 473
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 172/296 (58%), Positives = 219/296 (73%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 37 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 96
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 97 LAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ H
Sbjct: 157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEH 216
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 217 RLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 276
Query: 284 AXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
A R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 277 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFF 332
>ZFIN|ZDB-GENE-101102-2 [details] [associations]
symbol:gabrb3 "gamma-aminobutyric acid (GABA) A
receptor, beta 3" species:7955 "Danio rerio" [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-101102-2 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
EMBL:BX927286 EMBL:CR405707 IPI:IPI00898271
Ensembl:ENSDART00000087300 Uniprot:E7EXG0
Length = 532
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 175/316 (55%), Positives = 228/316 (72%)
Query: 27 SEKLRLCHKKSATTE-RLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSIS 85
++KL + SA ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +S
Sbjct: 51 NKKLFAIYDTSANEPGNMSFVKETVDKLLKGYDIRLRPDFGGAPVAVGMSIDVASIDMVS 110
Query: 86 EVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTE 145
EV+MDYT+TMY QYW+D RLA++ LTL A+++WVPDT+F NDK SF+H VT
Sbjct: 111 EVNMDYTLTMYFQQYWRDKRLAYTGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTV 170
Query: 146 RNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK-- 203
+N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YWK
Sbjct: 171 KNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGG 230
Query: 204 ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSIL 263
ET V GV +LPQF+I+ ++ R +TG Y RLSLSFKL+RNIGYF+ QTY+PSIL
Sbjct: 231 ETAVTGVSRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSIL 290
Query: 264 IVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVF 323
I +LSWVSFWIN++A++ARVA R +LP+I YVKAID+YL+ CFVF
Sbjct: 291 ITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVF 350
Query: 324 VFAALLEYAAVNYSYW 339
VF ALLEYA VNY ++
Sbjct: 351 VFLALLEYAFVNYIFF 366
>UNIPROTKB|P24045 [details] [associations]
symbol:GABRB4 "Gamma-aminobutyric acid receptor subunit
beta-4" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231335 EMBL:X56647 EMBL:X56648 EMBL:X56646
IPI:IPI00571160 IPI:IPI00596309 PIR:JH0359 RefSeq:NP_001161175.1
RefSeq:NP_001161176.1 UniGene:Gga.428 ProteinModelPortal:P24045
SMR:P24045 PRIDE:P24045 Ensembl:ENSGALT00000011746 GeneID:396288
KEGG:gga:396288 CTD:55879 InParanoid:P24045 OMA:ANNERHR
OrthoDB:EOG40S0FS NextBio:20816339 Uniprot:P24045
Length = 488
Score = 920 (328.9 bits), Expect = 2.4e-92, P = 2.4e-92
Identities = 170/309 (55%), Positives = 227/309 (73%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C +S +T ++ V + + +LL GYD+RLRP+FGG+P+ VGM + I+S D ISEV+MDYT
Sbjct: 23 CCAQSPSTGNISVVKEIVDKLLKGYDVRLRPDFGGNPVTVGMSIHISSIDQISEVNMDYT 82
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
ITMY Q W+D RLA++ LTL A+++W+PDT+F NDK SFLH VT +N+++RL
Sbjct: 83 ITMYFQQSWRDKRLAYNDLPLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRL 142
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYTV D+V +W+ ++ V G+
Sbjct: 143 HPDGTVLYGLRITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGM 202
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQFTI+ R+ TG+Y RLSLSF+++RNIGYF+ QTY+PSILI +LSWV
Sbjct: 203 EVLELPQFTIIEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWV 262
Query: 271 SFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVA R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 263 SFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLE 322
Query: 331 YAAVNYSYW 339
YA VNY ++
Sbjct: 323 YAFVNYIFF 331
>UNIPROTKB|P19019 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F EMBL:X54243 IPI:IPI00591128 PIR:S11440
RefSeq:NP_990677.1 UniGene:Gga.747 ProteinModelPortal:P19019
SMR:P19019 GeneID:396290 KEGG:gga:396290 CTD:2562 InParanoid:P19019
NextBio:20816341 ArrayExpress:P19019 Uniprot:P19019
Length = 476
Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
Identities = 169/296 (57%), Positives = 219/296 (73%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 37 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 96
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA++ LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 97 LAYAGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ +
Sbjct: 157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSIVEY 216
Query: 224 ETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARV 283
+ ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARV
Sbjct: 217 RLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARV 276
Query: 284 AXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
A R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 277 ALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFF 332
>ZFIN|ZDB-GENE-070424-211 [details] [associations]
symbol:si:dkey-169l5.3 "si:dkey-169l5.3"
species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
ZFIN:ZDB-GENE-070424-211 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685 EMBL:CABZ01006845
EMBL:CABZ01006846 EMBL:CABZ01006847 EMBL:CABZ01006848
EMBL:CABZ01006849 EMBL:CABZ01006850 EMBL:CABZ01006851
EMBL:CABZ01006852 EMBL:CABZ01006853 EMBL:CABZ01006854
EMBL:CABZ01006855 EMBL:CR932985 IPI:IPI00934600
Ensembl:ENSDART00000064718 Uniprot:F1Q4Y6
Length = 512
Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
Identities = 172/312 (55%), Positives = 229/312 (73%)
Query: 32 LCHKKSATTERLA-NVTQT-ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
+C +S++T +V +T + +LL GYDIRLRP+FGG P+ VGM + IAS DSISEV+M
Sbjct: 22 VCFAQSSSTGSTGISVAKTTVDKLLKGYDIRLRPDFGGPPVIVGMSINIASIDSISEVNM 81
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITMY Q W+D RLA++ LTL A+++W+PDT+F NDK SFLH VT +N++
Sbjct: 82 DYTITMYFQQSWRDKRLAYAEMALNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRM 141
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+V +W+ + V
Sbjct: 142 IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDNAV 201
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GV++ +LPQF+I+ R+ + TG+Y RLSLSF+++RNIGYF+ QTY+PSILI +L
Sbjct: 202 TGVDKLELPQFSIVELRLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILITIL 261
Query: 268 SWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVA R +LP+I YVKAID+YL+ CFVFVF A
Sbjct: 262 SWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLA 321
Query: 328 LLEYAAVNYSYW 339
LLEYA VNY ++
Sbjct: 322 LLEYAFVNYVFF 333
>MGI|MGI:95619 [details] [associations]
symbol:Gabrb1 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005253 "anion channel activity"
evidence=ISO] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=ISO] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0043235
"receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050811 "GABA receptor binding" evidence=ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 MGI:MGI:95619 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 CTD:2560 eggNOG:NOG77438 HOGENOM:HOG000231335
KO:K05181 OMA:YRKPMSS OrthoDB:EOG45756F EMBL:U14418 IPI:IPI00119283
PIR:S53530 RefSeq:NP_032095.1 UniGene:Mm.38567
ProteinModelPortal:P50571 SMR:P50571 STRING:P50571
PhosphoSite:P50571 PaxDb:P50571 PRIDE:P50571
Ensembl:ENSMUST00000031122 GeneID:14400 KEGG:mmu:14400
InParanoid:P50571 BindingDB:P50571 ChEMBL:CHEMBL2839 ChiTaRS:GABRB1
NextBio:285945 Bgee:P50571 Genevestigator:P50571
GermOnline:ENSMUSG00000029212 Uniprot:P50571
Length = 474
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 170/309 (55%), Positives = 221/309 (71%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C S ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSSNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVA R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYW 339
YA VNY ++
Sbjct: 324 YAFVNYIFF 332
>RGD|2649 [details] [associations]
symbol:Gabrb1 "gamma-aminobutyric acid (GABA) A receptor, beta 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005253 "anion channel activity"
evidence=IDA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=TAS] [GO:0009636 "response to toxic substance" evidence=IDA]
[GO:0015276 "ligand-gated ion channel activity" evidence=TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0021954 "central nervous
system neuron development" evidence=IEP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IDA] [GO:0032570
"response to progesterone stimulus" evidence=IEP] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042698 "ovulation
cycle" evidence=IEP] [GO:0043235 "receptor complex" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0050811 "GABA
receptor binding" evidence=IPI] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 RGD:2649 GO:GO:0005886
GO:GO:0005737 GO:GO:0005635 GO:GO:0016020 GO:GO:0009636 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0030425 GO:GO:0015276 GO:GO:0043235 GO:GO:0032570
GO:GO:0042698 GO:GO:0005253 GO:GO:0034707 GO:GO:0005254 GO:GO:0021954
GO:GO:0006821 HOVERGEN:HBG051707 CTD:2560 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OMA:YRKPMSS OrthoDB:EOG45756F EMBL:X15466 IPI:IPI00209268 PIR:S04464
RefSeq:NP_037088.1 UniGene:Rn.207157 ProteinModelPortal:P15431
SMR:P15431 IntAct:P15431 TCDB:1.A.9.5.1 PhosphoSite:P15431
PRIDE:P15431 Ensembl:ENSRNOT00000003170 GeneID:25450 KEGG:rno:25450
UCSC:RGD:2649 InParanoid:P15431 BindingDB:P15431 ChEMBL:CHEMBL334
NextBio:606697 Genevestigator:P15431 GermOnline:ENSRNOG00000002327
Uniprot:P15431
Length = 474
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 170/309 (55%), Positives = 221/309 (71%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C S ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSSNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVA R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYW 339
YA VNY ++
Sbjct: 324 YAFVNYIFF 332
>UNIPROTKB|P08220 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 EMBL:X05718 IPI:IPI00718227 PIR:B27142
RefSeq:NP_776969.1 UniGene:Bt.173 ProteinModelPortal:P08220
SMR:P08220 PRIDE:P08220 Ensembl:ENSBTAT00000023711 GeneID:282239
KEGG:bta:282239 CTD:2560 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 InParanoid:P08220
KO:K05181 OMA:YRKPMSS OrthoDB:EOG45756F BindingDB:P08220
ChEMBL:CHEMBL2848 NextBio:20806058 Uniprot:P08220
Length = 474
Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
Identities = 169/309 (54%), Positives = 221/309 (71%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSANEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVA R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYW 339
YA VNY ++
Sbjct: 324 YAFVNYIFF 332
>UNIPROTKB|P18505 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0032570 "response to progesterone stimulus" evidence=IEA]
[GO:0042698 "ovulation cycle" evidence=IEA] [GO:0043235 "receptor
complex" evidence=IEA] [GO:0050811 "GABA receptor binding"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006810 "transport" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0005887 "integral to plasma
membrane" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005887 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 EMBL:CH471069 DrugBank:DB00683
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690 CTD:2560
eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181 OMA:YRKPMSS
OrthoDB:EOG45756F EMBL:X14767 EMBL:M59216 EMBL:M59212 EMBL:M59214
EMBL:M59215 EMBL:AK312720 EMBL:BC022449 EMBL:S70733 IPI:IPI00299122
PIR:A40336 RefSeq:NP_000803.2 UniGene:Hs.27283
ProteinModelPortal:P18505 SMR:P18505 IntAct:P18505 STRING:P18505
PhosphoSite:P18505 DMDM:23831128 PaxDb:P18505 PRIDE:P18505
DNASU:2560 Ensembl:ENST00000295454 GeneID:2560 KEGG:hsa:2560
UCSC:uc003gxh.3 GeneCards:GC04P046949 H-InvDB:HIX0004191
H-InvDB:HIX0164000 HGNC:HGNC:4081 HPA:HPA051297 MIM:137190
neXtProt:NX_P18505 PharmGKB:PA28495 InParanoid:P18505
PhylomeDB:P18505 BindingDB:P18505 ChEMBL:CHEMBL4558 GenomeRNAi:2560
NextBio:10111 ArrayExpress:P18505 Bgee:P18505 CleanEx:HS_GABRB1
Genevestigator:P18505 Uniprot:P18505
Length = 474
Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
Identities = 169/309 (54%), Positives = 221/309 (71%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM + +AS D +SEV+MDYT
Sbjct: 24 CAHSTNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYT 83
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 84 LTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV
Sbjct: 144 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGV 203
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+ +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWV
Sbjct: 204 NKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWV 263
Query: 271 SFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVA R +LP+I YVKAIDIYL+ CFVFVF ALLE
Sbjct: 264 SFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLE 323
Query: 331 YAAVNYSYW 339
YA VNY ++
Sbjct: 324 YAFVNYIFF 332
>ZFIN|ZDB-GENE-090313-230 [details] [associations]
symbol:si:dkey-20i10.4 "si:dkey-20i10.4"
species:7955 "Danio rerio" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
ZFIN:ZDB-GENE-090313-230 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685 EMBL:CT025771
EMBL:CU469104 IPI:IPI00923251 ProteinModelPortal:F1QPW7
Ensembl:ENSDART00000108535 Uniprot:F1QPW7
Length = 484
Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
Identities = 169/298 (56%), Positives = 221/298 (74%)
Query: 43 LANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWK 102
++ V T+ +LL GYDIRLRP+FGG P+ VGM + I+S D +SEV+MDYTITMY Q W+
Sbjct: 42 MSYVKVTVDKLLKGYDIRLRPDFGGPPVDVGMSIDISSIDMVSEVNMDYTITMYFQQSWR 101
Query: 103 DDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+
Sbjct: 102 DKRLSYTGIPLNLTLDNRVADQLWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGL 161
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTIL 221
R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV+ +LPQF+I+
Sbjct: 162 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWQGGSSVTGVDNIELPQFSII 221
Query: 222 GHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
++T +K ATG+Y RLSLSFKL+RNIGYF+ QTY+PS LI +LSWVSFWIN++A++A
Sbjct: 222 DYKTLSKKVVFATGSYPRLSLSFKLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAA 281
Query: 282 RVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
RVA R +LP+I YVKAIDIYL+ CFVFVF ALLEYA VNY ++
Sbjct: 282 RVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFF 339
>ZFIN|ZDB-GENE-111215-5 [details] [associations]
symbol:gabrb2l "gamma-aminobutyric acid (GABA) A
receptor, beta 2 like" species:7955 "Danio rerio" [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-111215-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG265706 EMBL:BC142872 IPI:IPI00854121 UniGene:Dr.111185
ProteinModelPortal:A5PLE3 Uniprot:A5PLE3
Length = 427
Score = 911 (325.7 bits), Expect = 2.1e-91, P = 2.1e-91
Identities = 169/310 (54%), Positives = 224/310 (72%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 24 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVGVGMNIDIASIDMVSEVNMDY 83
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 84 TLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 143
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ V G
Sbjct: 144 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGNHAVTG 203
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
VE +LPQF+I+ ++ + +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 204 VERIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 263
Query: 270 VSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVA R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 264 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALL 323
Query: 330 EYAAVNYSYW 339
EYA VNY ++
Sbjct: 324 EYALVNYIFF 333
>UNIPROTKB|P0C2W5 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 IPI:IPI00823907 UniGene:Bt.63930
ProteinModelPortal:P0C2W5 SMR:P0C2W5 STRING:P0C2W5 Uniprot:P0C2W5
Length = 472
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 168/310 (54%), Positives = 226/310 (72%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 20 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 79
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 80 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 139
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 140 LHPDGTVLYGLRITTTTACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 199
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 200 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 259
Query: 270 VSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVA R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 260 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 319
Query: 330 EYAAVNYSYW 339
EYA VNY ++
Sbjct: 320 EYALVNYIFF 329
>UNIPROTKB|L7N0C0 [details] [associations]
symbol:GABRB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
GeneTree:ENSGT00630000089685 EMBL:AAEX03003043
Ensembl:ENSCAFT00000015972 Uniprot:L7N0C0
Length = 474
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 168/310 (54%), Positives = 226/310 (72%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVA R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYW 339
EYA VNY ++
Sbjct: 322 EYALVNYIFF 331
>UNIPROTKB|P47870 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0090102 "cochlea development"
evidence=IEA] [GO:0005237 "inhibitory extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0006810
"transport" evidence=TAS] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] [GO:0051932 "synaptic
transmission, GABAergic" evidence=ISS] [GO:0004890 "GABA-A receptor
activity" evidence=ISS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005829 GO:GO:0005887
EMBL:CH471062 GO:GO:0030054 GO:GO:0045211 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0007605 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
GO:GO:0090102 GO:GO:0051932 DrugBank:DB00683 GO:GO:0060119
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690 GO:GO:0005237
TCDB:1.A.9.5.2 GO:GO:0060384 eggNOG:NOG77438 KO:K05181
OrthoDB:EOG45756F EMBL:S67368 EMBL:S77554 EMBL:S77553 EMBL:GU086163
EMBL:GU086164 EMBL:AK289730 EMBL:AK289815 EMBL:BC099705
EMBL:BC099719 EMBL:BC105639 IPI:IPI00026639 IPI:IPI00216394
IPI:IPI00954901 IPI:IPI00955985 PIR:I52656 RefSeq:NP_000804.1
RefSeq:NP_068711.1 UniGene:Hs.303527 ProteinModelPortal:P47870
SMR:P47870 MINT:MINT-268409 STRING:P47870 PhosphoSite:P47870
DMDM:292495010 PaxDb:P47870 PeptideAtlas:P47870 PRIDE:P47870
Ensembl:ENST00000274547 Ensembl:ENST00000353437
Ensembl:ENST00000393959 Ensembl:ENST00000520240 GeneID:2561
KEGG:hsa:2561 UCSC:uc003lyr.1 UCSC:uc003lys.1 UCSC:uc021yhg.1
CTD:2561 GeneCards:GC05M160715 HGNC:HGNC:4082 HPA:CAB001964
MIM:600232 neXtProt:NX_P47870 PharmGKB:PA28496 OMA:TSSIQYR
PhylomeDB:P47870 BindingDB:P47870 ChEMBL:CHEMBL1920 GenomeRNAi:2561
NextBio:10115 ArrayExpress:P47870 Bgee:P47870 CleanEx:HS_GABRB2
Genevestigator:P47870 GermOnline:ENSG00000145864 Uniprot:P47870
Length = 512
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 168/310 (54%), Positives = 226/310 (72%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVA R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYW 339
EYA VNY ++
Sbjct: 322 EYALVNYIFF 331
>MGI|MGI:95620 [details] [associations]
symbol:Gabrb2 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=ISO] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007605 "sensory perception
of sound" evidence=IMP] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISO] [GO:0060119 "inner ear receptor cell
development" evidence=IMP] [GO:0060384 "innervation" evidence=IMP]
[GO:0090102 "cochlea development" evidence=IMP] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
MGI:MGI:95620 GO:GO:0005829 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007605
GO:GO:0034707 GO:GO:0005254 GO:GO:0090102 GO:GO:0060119
HOVERGEN:HBG051707 GO:GO:0005237 GO:GO:0060384 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F CTD:2561 OMA:TSSIQYR EMBL:U14419 EMBL:GU086167
EMBL:AK090279 EMBL:AL627444 EMBL:AL645964 EMBL:CH466609
EMBL:BC145973 EMBL:BC145975 IPI:IPI00323554 IPI:IPI00955696
PIR:S53531 RefSeq:NP_032096.1 UniGene:Mm.338723 UniGene:Mm.471870
ProteinModelPortal:P63137 SMR:P63137 STRING:P63137
PhosphoSite:P63137 PRIDE:P63137 Ensembl:ENSMUST00000007797
GeneID:14401 KEGG:mmu:14401 UCSC:uc007imi.1 InParanoid:A6H6R7
ChEMBL:CHEMBL4545 NextBio:285949 Bgee:P63137 Genevestigator:P63137
GermOnline:ENSMUSG00000007653 Uniprot:P63137
Length = 512
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 168/310 (54%), Positives = 226/310 (72%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVA R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYW 339
EYA VNY ++
Sbjct: 322 EYALVNYIFF 331
>RGD|2650 [details] [associations]
symbol:Gabrb2 "gamma-aminobutyric acid (GABA) A receptor, beta 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IMP;TAS] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=IMP] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=TAS] [GO:0007605
"sensory perception of sound" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=ISO] [GO:0051932 "synaptic transmission,
GABAergic" evidence=IDA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA;ISO] [GO:0060384 "innervation"
evidence=IEA;ISO] [GO:0090102 "cochlea development" evidence=IEA;ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160
PROSITE:PS00236 RGD:2650 GO:GO:0005829 GO:GO:0005886 GO:GO:0016020
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0007605 GO:GO:0034707 GO:GO:0005254 GO:GO:0090102
GO:GO:0051932 GO:GO:0060119 HOVERGEN:HBG051707 GO:GO:0005237
GO:GO:0060384 eggNOG:NOG77438 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231335 KO:K05181 OrthoDB:EOG45756F CTD:2561 OMA:TSSIQYR
EMBL:X15467 EMBL:AY574251 IPI:IPI00209269 PIR:S04465
RefSeq:NP_037089.1 UniGene:Rn.207158 ProteinModelPortal:P63138
SMR:P63138 IntAct:P63138 STRING:P63138 PhosphoSite:P63138
PRIDE:P63138 Ensembl:ENSRNOT00000004970 GeneID:25451 KEGG:rno:25451
UCSC:RGD:2650 InParanoid:P63138 BindingDB:P63138 ChEMBL:CHEMBL295
NextBio:606701 Genevestigator:P63138 GermOnline:ENSRNOG00000003680
Uniprot:P63138
Length = 474
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 168/310 (54%), Positives = 226/310 (72%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVA R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYW 339
EYA VNY ++
Sbjct: 322 EYALVNYIFF 331
>UNIPROTKB|F1NES7 [details] [associations]
symbol:LOC100858201 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 IPI:IPI00591128 OMA:FYAIYET
EMBL:AADN02017665 EMBL:AADN02017666 EMBL:AADN02017667
EMBL:AADN02017668 EMBL:AC145944 ProteinModelPortal:F1NES7
Ensembl:ENSGALT00000027029 ArrayExpress:F1NES7 Uniprot:F1NES7
Length = 478
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 169/298 (56%), Positives = 219/298 (73%)
Query: 46 VTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDYT+TMY QYW+D R
Sbjct: 37 VKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKR 96
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
LA++ LTL A+++WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R T
Sbjct: 97 LAYAGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRIT 156
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGH 223
TT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE +LPQF+I+ +
Sbjct: 157 TTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSIVEY 216
Query: 224 ETNDRKEKLATG--TYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
+ ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++A
Sbjct: 217 RLVSKNVVFATGKCAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA 276
Query: 282 RVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
RVA R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 277 RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFF 334
>ZFIN|ZDB-GENE-030131-8196 [details] [associations]
symbol:gabrb2 "gamma-aminobutyric acid (GABA) A
receptor, beta 2" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-030131-8196
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG051707 KO:K05181 CTD:2561 HSSP:P23415 EMBL:AJ302649
IPI:IPI00852026 RefSeq:NP_001019558.2 UniGene:Dr.132858
ProteinModelPortal:Q9DDD9 SMR:Q9DDD9 GeneID:336252 KEGG:dre:336252
InParanoid:Q9DDD9 NextBio:20811647 Uniprot:Q9DDD9
Length = 519
Score = 905 (323.6 bits), Expect = 9.3e-91, P = 9.3e-91
Identities = 168/309 (54%), Positives = 222/309 (71%)
Query: 33 CHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYT 92
C + + V T+ +L+ GYDIRLRP+FGG P+ V M++ IAS D +SEV+MDYT
Sbjct: 22 CAQSIRDPSNMPVVKDTVDRLMKGYDIRLRPDFGGAPVAVRMNIDIASIDMVSEVNMDYT 81
Query: 93 ITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+TMY Q W+D RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL
Sbjct: 82 LTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRL 141
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGV 210
+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV
Sbjct: 142 HPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGV 201
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQF+I+G++ + +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWV
Sbjct: 202 ERIELPQFSIVGYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWV 261
Query: 271 SFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWIN++A++ARVA R +LP+I YVKAID+YL+ CFVFVF ALLE
Sbjct: 262 SFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLE 321
Query: 331 YAAVNYSYW 339
YA VNY ++
Sbjct: 322 YAFVNYIFF 330
>UNIPROTKB|F1NB54 [details] [associations]
symbol:GABRB2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 OMA:TSSIQYR EMBL:AADN02035869
EMBL:AADN02035870 EMBL:AADN02035871 EMBL:AADN02035872
EMBL:AADN02035873 EMBL:AADN02035874 IPI:IPI00587146
Ensembl:ENSGALT00000011745 Uniprot:F1NB54
Length = 475
Score = 904 (323.3 bits), Expect = 1.2e-90, P = 1.2e-90
Identities = 168/311 (54%), Positives = 225/311 (72%)
Query: 32 LCHKKSATT-ERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMD 90
+C + S ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MD
Sbjct: 22 VCAQSSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMD 81
Query: 91 YTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLV 150
YT+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++
Sbjct: 82 YTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMI 141
Query: 151 RLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVR 208
RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V
Sbjct: 142 RLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVT 201
Query: 209 GVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLS 268
GV + +LPQF+I+ ++ + +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LS
Sbjct: 202 GVTKIELPQFSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILS 261
Query: 269 WVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAAL 328
WVSFWIN++A++ARVA R +LP+I YVKAID+YL+ CFVFVF AL
Sbjct: 262 WVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMAL 321
Query: 329 LEYAAVNYSYW 339
LEYA VNY ++
Sbjct: 322 LEYALVNYIFF 332
>UNIPROTKB|Q90590 [details] [associations]
symbol:GABARB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG77438 GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335
OrthoDB:EOG45756F HSSP:P23415 EMBL:AADN02035869 EMBL:AADN02035870
EMBL:AADN02035871 EMBL:AADN02035872 EMBL:AADN02035873
EMBL:AADN02035874 EMBL:X72806 IPI:IPI00594639 PIR:JH0828
UniGene:Gga.734 Ensembl:ENSGALT00000002584 Uniprot:Q90590
Length = 430
Score = 904 (323.3 bits), Expect = 1.2e-90, P = 1.2e-90
Identities = 167/310 (53%), Positives = 224/310 (72%)
Query: 32 LCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDY 91
+C + ++ V +T+ +LL GYDIRLRP+FGG P+ VGM++ IAS D +SEV+MDY
Sbjct: 22 VCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDY 81
Query: 92 TITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
T+TMY Q W+D RL+++ LTL A+++WVPDT+F NDK SF+H VT +N+++R
Sbjct: 82 TLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIR 141
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRG 209
L+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V G
Sbjct: 142 LHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTG 201
Query: 210 VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
V + +LPQF+I+ ++ + +TG Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSW
Sbjct: 202 VTKIELPQFSIVDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSW 261
Query: 270 VSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN++A++ARVA R +LP+I YVKAID+YL+ CFVFVF ALL
Sbjct: 262 VSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALL 321
Query: 330 EYAAVNYSYW 339
EYA VNY ++
Sbjct: 322 EYALVNYIFF 331
>UNIPROTKB|E1BFC0 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9913 "Bos taurus" [GO:0090102 "cochlea development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007605 GO:GO:0090102
GO:GO:0060119 GO:GO:0060384 GeneTree:ENSGT00630000089685
OMA:TSSIQYR EMBL:DAAA02020899 EMBL:DAAA02020900 EMBL:DAAA02020901
EMBL:DAAA02020902 EMBL:DAAA02020903 EMBL:DAAA02020904
EMBL:DAAA02020905 IPI:IPI01001787 ProteinModelPortal:E1BFC0
Ensembl:ENSBTAT00000024736 BindingDB:E1BFC0 Uniprot:E1BFC0
Length = 519
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 154/277 (55%), Positives = 204/277 (73%)
Query: 65 FGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEK 124
F G P+ VGM++ IAS D +SEV+MDYT+TMY Q W+D RL+++ LTL A++
Sbjct: 62 FSGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQ 121
Query: 125 IWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNC 184
+WVPDT+F NDK SF+H VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNC
Sbjct: 122 LWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNC 181
Query: 185 TVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSL 242
T+EIESYGYT D+ YW+ + V GV + +LPQF+I+ ++ +K +TG+Y RLSL
Sbjct: 182 TLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSL 241
Query: 243 SFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRS 302
SFKL+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARVA R
Sbjct: 242 SFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRE 301
Query: 303 SLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
+LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 302 TLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFF 338
>UNIPROTKB|J9P3X1 [details] [associations]
symbol:GABRB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FYAIYET EMBL:AAEX03002176 EMBL:AAEX03002177 EMBL:AAEX03002178
Ensembl:ENSCAFT00000043201 Uniprot:J9P3X1
Length = 409
Score = 830 (297.2 bits), Expect = 8.2e-83, P = 8.2e-83
Identities = 154/268 (57%), Positives = 196/268 (73%)
Query: 74 MDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFA 133
M++ IAS D +SEV+MDYT+TMY QYW+D RLA+S LTL A+++WVPDT+F
Sbjct: 1 MNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFL 60
Query: 134 NDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGY 193
NDK SF+H VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGY
Sbjct: 61 NDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGY 120
Query: 194 TVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIG 251
T D+ YW+ + V GVE +LPQF+I+ H R ATG Y RLSLSF+L+RNIG
Sbjct: 121 TTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIG 180
Query: 252 YFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVK 311
YF+ QTY+PSILI +LSWVSFWIN++A++ARVA R +LP+I YVK
Sbjct: 181 YFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVK 240
Query: 312 AIDIYLVMCFVFVFAALLEYAAVNYSYW 339
AID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 241 AIDMYLMGCFVFVFLALLEYAFVNYIFF 268
>UNIPROTKB|E7EV50 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4082 EMBL:AC008712
EMBL:AC022120 EMBL:AC091882 EMBL:AC091989 IPI:IPI00982847
ProteinModelPortal:E7EV50 SMR:E7EV50 Ensembl:ENST00000517901
ArrayExpress:E7EV50 Bgee:E7EV50 Uniprot:E7EV50
Length = 411
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 149/268 (55%), Positives = 198/268 (73%)
Query: 74 MDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFA 133
M++ IAS D +SEV+MDYT+TMY Q W+D RL+++ LTL A+++WVPDT+F
Sbjct: 1 MNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDTYFL 60
Query: 134 NDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGY 193
NDK SF+H VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGY
Sbjct: 61 NDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGY 120
Query: 194 TVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIG 251
T D+ YW+ + V GV + +LPQF+I+ ++ +K +TG+Y RLSLSFKL+RNIG
Sbjct: 121 TTDDIEFYWRGDDNAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKRNIG 180
Query: 252 YFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVK 311
YF+ QTY+PSILI +LSWVSFWIN++A++ARVA R +LP+I YVK
Sbjct: 181 YFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVK 240
Query: 312 AIDIYLVMCFVFVFAALLEYAAVNYSYW 339
AID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 241 AIDMYLMGCFVFVFMALLEYALVNYIFF 268
>UNIPROTKB|F1LRQ0 [details] [associations]
symbol:Gabrb3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
RGD:2651 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 IPI:IPI00950928
Ensembl:ENSRNOT00000065223 ArrayExpress:F1LRQ0 Uniprot:F1LRQ0
Length = 402
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 149/260 (57%), Positives = 188/260 (72%)
Query: 82 DSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLH 141
D +EV MDYT+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H
Sbjct: 2 DMFAEVCMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVH 61
Query: 142 DVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMY 201
VT +N+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ Y
Sbjct: 62 GVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFY 121
Query: 202 WK--ETPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYL 259
W+ + V GVE +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+
Sbjct: 122 WRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYM 181
Query: 260 PSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVM 319
PSILI +LSWVSFWIN++A++ARVA R +LP+I YVKAID+YL+
Sbjct: 182 PSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMG 241
Query: 320 CFVFVFAALLEYAAVNYSYW 339
CFVFVF ALLEYA VNY ++
Sbjct: 242 CFVFVFLALLEYAFVNYIFF 261
>UNIPROTKB|F1MAU5 [details] [associations]
symbol:GABRB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0007605 "sensory perception of
sound" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FYAIYET EMBL:DAAA02051680 EMBL:DAAA02051681 EMBL:DAAA02051682
IPI:IPI00695874 Ensembl:ENSBTAT00000017858 ArrayExpress:F1MAU5
Uniprot:F1MAU5
Length = 392
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 145/252 (57%), Positives = 183/252 (72%)
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYT+TMY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N++
Sbjct: 1 DYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRM 60
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
+RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V
Sbjct: 61 IRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAV 120
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GVE +LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +L
Sbjct: 121 TGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITIL 180
Query: 268 SWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SWVSFWIN++A++ARVA R +LP+I YVKAID+YL+ CFVFVF A
Sbjct: 181 SWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLA 240
Query: 328 LLEYAAVNYSYW 339
LLEYA VNY ++
Sbjct: 241 LLEYAFVNYIFF 252
>UNIPROTKB|E1BW41 [details] [associations]
symbol:LOC100858201 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
EMBL:AADN02017665 EMBL:AADN02017666 EMBL:AADN02017667
EMBL:AADN02017668 EMBL:AC145944 IPI:IPI00589447
Ensembl:ENSGALT00000027028 ArrayExpress:E1BW41 Uniprot:E1BW41
Length = 397
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 143/253 (56%), Positives = 184/253 (72%)
Query: 89 MDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNK 148
MDYT+TMY QYW+D RLA++ LTL A+++WVPDT+F NDK SF+H VT +N+
Sbjct: 1 MDYTLTMYFQQYWRDKRLAYAGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNR 60
Query: 149 LVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETP 206
++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ +
Sbjct: 61 MIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNA 120
Query: 207 VRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVM 266
V GVE +LPQF+I+ + + ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +
Sbjct: 121 VTGVERIELPQFSIVEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITI 180
Query: 267 LSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFA 326
LSWVSFWIN++A++ARVA R +LP+I YVKAID+YL+ CFVFVF
Sbjct: 181 LSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFL 240
Query: 327 ALLEYAAVNYSYW 339
ALLEYA VNY ++
Sbjct: 241 ALLEYAFVNYIFF 253
>UNIPROTKB|F5GXV5 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:AC107383 HGNC:HGNC:4081
EMBL:AC097712 EMBL:AC105394 EMBL:AC107392 IPI:IPI01009264
ProteinModelPortal:F5GXV5 SMR:F5GXV5 Ensembl:ENST00000538619
UCSC:uc011bze.2 ArrayExpress:F5GXV5 Bgee:F5GXV5 Uniprot:F5GXV5
Length = 404
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 143/254 (56%), Positives = 183/254 (72%)
Query: 88 SMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERN 147
S DYT+TMY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N
Sbjct: 9 SEDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKN 68
Query: 148 KLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ET 205
+++RL+ DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E
Sbjct: 69 RMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEG 128
Query: 206 PVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIV 265
V GV + +LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI
Sbjct: 129 AVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLIT 188
Query: 266 MLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVF 325
+LSWVSFWIN++A++ARVA R +LP+I YVKAIDIYL+ CFVFVF
Sbjct: 189 ILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVF 248
Query: 326 AALLEYAAVNYSYW 339
ALLEYA VNY ++
Sbjct: 249 LALLEYAFVNYIFF 262
>UNIPROTKB|E2QVJ3 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008101 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01725 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 PANTHER:PTHR18945:SF87
Ensembl:ENSCAFT00000030427 Uniprot:E2QVJ3
Length = 649
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 139/313 (44%), Positives = 209/313 (66%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + K E + V + + ++L YD+RLRPNFGG P+ VG+ + ++S + ISE++M
Sbjct: 45 LNLFNCKKCANEGV--VHKILDRVLSNYDVRLRPNFGGAPVPVGVSMYVSSIEQISEMTM 102
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM+ +Q WKD RLA+ D LTL EK+WVPD +F N K++F+HDVT N++
Sbjct: 103 DYTITMFFHQTWKDPRLAYHETDLNLTLDYRMLEKLWVPDCYFLNSKDAFVHDVTVENRV 162
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PV 207
+L+ DG++ YGMR TTT AC +DL +PLD Q C +E+ESYGYTV D+V+YW+ +
Sbjct: 163 FQLHPDGTVRYGMRLTTTAACSLDLQKFPLDKQTCKLEVESYGYTVEDIVLYWEGNGNAI 222
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
+G E+ +PQF+ LG + ++ TG+Y RL L F +QR + ++ Q Y P++L ++
Sbjct: 223 QGTEKLHIPQFSFLGKTMSSKEVFFYTGSYVRLILRFLVQREVTSYLVQIYWPTVLTTVV 282
Query: 268 SWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SW+SFW+N+E+++ARV R LP+++ +KAIDIY+V+CF+FVF +
Sbjct: 283 SWISFWMNYESSAARVTVGLTSMLILNAINSHLRDKLPQVACIKAIDIYMVVCFLFVFLS 342
Query: 328 LLEYAAVNYSYWA 340
LLEY +NY Y++
Sbjct: 343 LLEYVYINYLYYS 355
>UNIPROTKB|F6XRX3 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008101 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01725 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FFHQTWK PANTHER:PTHR18945:SF87 Ensembl:ENSCAFT00000030427
EMBL:AAEX03027062 Uniprot:F6XRX3
Length = 643
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 139/313 (44%), Positives = 209/313 (66%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + K E + V + + ++L YD+RLRPNFGG P+ VG+ + ++S + ISE++M
Sbjct: 45 LNLFNCKKCANEGV--VHKILDRVLSNYDVRLRPNFGGAPVPVGVSMYVSSIEQISEMTM 102
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM+ +Q WKD RLA+ D LTL EK+WVPD +F N K++F+HDVT N++
Sbjct: 103 DYTITMFFHQTWKDPRLAYHETDLNLTLDYRMLEKLWVPDCYFLNSKDAFVHDVTVENRV 162
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PV 207
+L+ DG++ YGMR TTT AC +DL +PLD Q C +E+ESYGYTV D+V+YW+ +
Sbjct: 163 FQLHPDGTVRYGMRLTTTAACSLDLQKFPLDKQTCKLEVESYGYTVEDIVLYWEGNGNAI 222
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
+G E+ +PQF+ LG + ++ TG+Y RL L F +QR + ++ Q Y P++L ++
Sbjct: 223 QGTEKLHIPQFSFLGKTMSSKEVFFYTGSYVRLILRFLVQREVTSYLVQIYWPTVLTTVV 282
Query: 268 SWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SW+SFW+N+E+++ARV R LP+++ +KAIDIY+V+CF+FVF +
Sbjct: 283 SWISFWMNYESSAARVTVGLTSMLILNAINSHLRDKLPQVACIKAIDIYMVVCFLFVFLS 342
Query: 328 LLEYAAVNYSYWA 340
LLEY +NY Y++
Sbjct: 343 LLEYVYINYLYYS 355
>UNIPROTKB|F5H3D2 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 KO:K05181
CTD:2562 RefSeq:NP_001178249.1 UniGene:Hs.302352 DNASU:2562
GeneID:2562 KEGG:hsa:2562 HGNC:HGNC:4083 ChiTaRS:GABRB3
GenomeRNAi:2562 NextBio:10121 EMBL:AC009878 EMBL:AC011196
EMBL:AC104569 EMBL:AC127511 EMBL:AC135999 EMBL:AC145167
EMBL:AC145196 EMBL:EU606048 IPI:IPI00975640
ProteinModelPortal:F5H3D2 SMR:F5H3D2 PRIDE:F5H3D2
Ensembl:ENST00000545868 ArrayExpress:F5H3D2 Bgee:F5H3D2
Uniprot:F5H3D2
Length = 388
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 141/247 (57%), Positives = 178/247 (72%)
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MY QYW+D RLA+S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHP 60
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEE 212
DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW+ + V GVE
Sbjct: 61 DGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVER 120
Query: 213 AQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSF 272
+LPQF+I+ H R ATG Y RLSLSF+L+RNIGYF+ QTY+PSILI +LSWVSF
Sbjct: 121 IELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSF 180
Query: 273 WINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 332
WIN++A++ARVA R +LP+I YVKAID+YL+ CFVFVF ALLEYA
Sbjct: 181 WINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYA 240
Query: 333 AVNYSYW 339
VNY ++
Sbjct: 241 FVNYIFF 247
>UNIPROTKB|F1PEG2 [details] [associations]
symbol:GABRB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:YRKPMSS EMBL:AAEX03009038 Ensembl:ENSCAFT00000002993
Uniprot:F1PEG2
Length = 390
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 138/247 (55%), Positives = 177/247 (71%)
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
MY Q WKD RL++S LTL A+++WVPDT+F NDK SF+H VT +N+++RL+
Sbjct: 1 MYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHP 60
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEE 212
DG++ YG+R TTT ACMMDL YPLD QNCT+EIESYGYT D+ YW E V GV +
Sbjct: 61 DGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNK 120
Query: 213 AQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSF 272
+LPQF+I+ ++ +K + TG Y RLSLSF+L+RNIGYF+ QTY+PS LI +LSWVSF
Sbjct: 121 IELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSF 180
Query: 273 WINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 332
WIN++A++ARVA R +LP+I YVKAIDIYL+ CFVFVF ALLEYA
Sbjct: 181 WINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYA 240
Query: 333 AVNYSYW 339
VNY ++
Sbjct: 241 FVNYIFF 247
>UNIPROTKB|E1BQL4 [details] [associations]
symbol:GABRD "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 OMA:EYTMTVF
GeneTree:ENSGT00630000089571 EMBL:AADN02040874 IPI:IPI00599008
Ensembl:ENSGALT00000001958 Uniprot:E1BQL4
Length = 430
Score = 720 (258.5 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 132/291 (45%), Positives = 193/291 (66%)
Query: 50 ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
+ L+ GY RP GG P+ V + + +AS D ISEV+M+YT+T++L+Q W+DDRL+++
Sbjct: 20 LDDLMKGYARNFRPGIGGPPVNVALAIEVASIDHISEVNMEYTMTVFLHQSWRDDRLSYN 79
Query: 110 SEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLA 169
+E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+A
Sbjct: 80 HTNETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVA 139
Query: 170 CMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHE-TN 226
C MDL YP+D Q C +++ESYGY+ D+V +W E + G+++ QL QFTI ++ T
Sbjct: 140 CDMDLSKYPMDEQECMLDLESYGYSSEDIVYHWSENQDEIHGLDKLQLAQFTITNYQFTT 199
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXX 286
+ + G + RLSL F L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV+
Sbjct: 200 ELMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYVPSILLVAMSWVSFWISQSAVPARVSLG 259
Query: 287 XXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 260 ITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 310
Score = 39 (18.8 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 308 SYVKAIDIYLVMCFV-FVFAALLEYAAVNYSYW 339
S K ID + + VF A +AAVN YW
Sbjct: 383 SLFKPIDADTIDIYARAVFPAA--FAAVNVIYW 413
>UNIPROTKB|E1BJH4 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008101 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01725 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
CTD:55879 KO:K05192 OMA:FFHQTWK PANTHER:PTHR18945:SF87
EMBL:DAAA02068181 IPI:IPI00727908 RefSeq:NP_001179568.1
UniGene:Bt.106437 ProteinModelPortal:E1BJH4
Ensembl:ENSBTAT00000060999 GeneID:527180 KEGG:bta:527180
NextBio:20874535 Uniprot:E1BJH4
Length = 642
Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
Identities = 140/335 (41%), Positives = 214/335 (63%)
Query: 11 DFNSENELESQIGNSDSEK-LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDP 69
D +S + ++ ++ E L L K+ E A V + + ++L YD RLRPNFGG P
Sbjct: 25 DLSSTPKFHVELSSTVPEVVLNLFDCKNCANE--ATVHKILDRVLSNYDSRLRPNFGGTP 82
Query: 70 LYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPD 129
+ VG+ + ++S + ISEV+MDYTITM+ +Q WKD RLA+ + LTL EK+WVPD
Sbjct: 83 VPVGVSIYVSSIEQISEVTMDYTITMFFHQTWKDPRLAYHETNLNLTLDYRLFEKLWVPD 142
Query: 130 TFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIE 189
+F N K +F+HD T N++ +L+ DG++ YG+R TTT AC M+L +PLD Q C +E+E
Sbjct: 143 CYFLNSKEAFVHDATVENRVFQLHPDGTVRYGIRLTTTAACSMNLEKFPLDKQTCKLEVE 202
Query: 190 SYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQ 247
SYGYTV D+++YW+ + V+G E+ +PQF+ LG + ++ TG+Y RL L F ++
Sbjct: 203 SYGYTVDDILLYWEGSGNAVQGTEKLHIPQFSFLGKTISTKEVFFYTGSYVRLILRFLVK 262
Query: 248 RNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRI 307
R + ++ Q Y PS+L ++SW+SFW+N+E+++ARV R+ P+
Sbjct: 263 REVTSYLVQIYWPSVLTTVVSWISFWMNYESSAARVTVGLTSMLILNSINSHLRNQFPQF 322
Query: 308 SYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADR 342
S +KAIDIY+V+CF FVF +L+EY +NY ++ R
Sbjct: 323 SCIKAIDIYMVVCFFFVFLSLVEYVYINYLFYNRR 357
>UNIPROTKB|F1S2D2 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008101 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01725 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FFHQTWK PANTHER:PTHR18945:SF87 EMBL:CU468868
Ensembl:ENSSSCT00000013945 Uniprot:F1S2D2
Length = 655
Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
Identities = 140/335 (41%), Positives = 215/335 (64%)
Query: 11 DFNSENELESQIGNSDSEK-LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDP 69
DF+S + ++ ++ E L L K+ E A V + + ++L YD+RLRPNFGG P
Sbjct: 25 DFSSTPKFHFELSSTVPEVVLDLFSCKNCANE--AVVHKILDRVLSKYDVRLRPNFGGAP 82
Query: 70 LYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPD 129
+ VG+ + ++S + ISE++MDYTITM+ +Q WKD RLA+ + LTL EK+WVPD
Sbjct: 83 VPVGVSIYVSSIEQISEMTMDYTITMFFHQTWKDPRLAYYETNLNLTLDYRMLEKLWVPD 142
Query: 130 TFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIE 189
+F N K++F+HDVT N++ +L DG++ YG+R TTT AC M+L +PLD Q C +E+E
Sbjct: 143 CYFLNSKDAFVHDVTVENRVFQLQPDGTVRYGIRLTTTAACSMNLQNFPLDKQTCKLEVE 202
Query: 190 SYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQ 247
SYGYTV D+++YW+ ++G E+ +PQF+ LG ++ TG+Y RL L F ++
Sbjct: 203 SYGYTVEDILLYWEGNGNAIQGTEKLHIPQFSFLGKTMTSKEVFFYTGSYVRLILRFLVK 262
Query: 248 RNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRI 307
R I ++ Q Y P++L ++SW+SFW+N+E ++ARV LP+I
Sbjct: 263 REIISYLVQIYWPTVLTTVVSWISFWMNYECSAARVTVGLTSMLILNAINSHLWDKLPQI 322
Query: 308 SYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADR 342
+ +KAIDIY+V+CF FVF +L+EY +NY +++ R
Sbjct: 323 ACIKAIDIYMVVCFFFVFLSLMEYIYINYLFYSRR 357
>UNIPROTKB|K7GR83 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008101
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
PANTHER:PTHR18945:SF87 EMBL:CU468868 Ensembl:ENSSSCT00000033178
Uniprot:K7GR83
Length = 385
Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
Identities = 140/335 (41%), Positives = 215/335 (64%)
Query: 11 DFNSENELESQIGNSDSEK-LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDP 69
DF+S + ++ ++ E L L K+ E A V + + ++L YD+RLRPNFGG P
Sbjct: 25 DFSSTPKFHFELSSTVPEVVLDLFSCKNCANE--AVVHKILDRVLSKYDVRLRPNFGGAP 82
Query: 70 LYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPD 129
+ VG+ + ++S + ISE++MDYTITM+ +Q WKD RLA+ + LTL EK+WVPD
Sbjct: 83 VPVGVSIYVSSIEQISEMTMDYTITMFFHQTWKDPRLAYYETNLNLTLDYRMLEKLWVPD 142
Query: 130 TFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIE 189
+F N K++F+HDVT N++ +L DG++ YG+R TTT AC M+L +PLD Q C +E+E
Sbjct: 143 CYFLNSKDAFVHDVTVENRVFQLQPDGTVRYGIRLTTTAACSMNLQNFPLDKQTCKLEVE 202
Query: 190 SYGYTVLDVVMYWKET--PVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQ 247
SYGYTV D+++YW+ ++G E+ +PQF+ LG ++ TG+Y RL L F ++
Sbjct: 203 SYGYTVEDILLYWEGNGNAIQGTEKLHIPQFSFLGKTMTSKEVFFYTGSYVRLILRFLVK 262
Query: 248 RNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRI 307
R I ++ Q Y P++L ++SW+SFW+N+E ++ARV LP+I
Sbjct: 263 REIISYLVQIYWPTVLTTVVSWISFWMNYECSAARVTVGLTSMLILNAINSHLWDKLPQI 322
Query: 308 SYVKAIDIYLVMCFVFVFAALLEYAAVNYSYWADR 342
+ +KAIDIY+V+CF FVF +L+EY +NY +++ R
Sbjct: 323 ACIKAIDIYMVVCFFFVFLSLMEYIYINYLFYSRR 357
>UNIPROTKB|O14764 [details] [associations]
symbol:GABRD "Gamma-aminobutyric acid receptor subunit
delta" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 GO:GO:0005887 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0006810 GO:GO:0034707
GO:GO:0005254 Orphanet:307 HOVERGEN:HBG051707 HOGENOM:HOG000231335
EMBL:AF016917 EMBL:AL391845 EMBL:BC033801 IPI:IPI00375475
RefSeq:NP_000806.2 UniGene:Hs.113882 ProteinModelPortal:O14764
SMR:O14764 IntAct:O14764 MINT:MINT-1461496 STRING:O14764
PhosphoSite:O14764 PRIDE:O14764 DNASU:2563 Ensembl:ENST00000378585
GeneID:2563 KEGG:hsa:2563 UCSC:uc001aip.2 CTD:2563
GeneCards:GC01P001950 HGNC:HGNC:4084 MIM:137163 MIM:613060
neXtProt:NX_O14764 Orphanet:36387 Orphanet:1606 PharmGKB:PA28498
eggNOG:NOG308574 InParanoid:O14764 KO:K05184 OMA:EYTMTVF
OrthoDB:EOG4H9XKN PhylomeDB:O14764 BindingDB:O14764
ChEMBL:CHEMBL3591 GenomeRNAi:2563 NextBio:10127 Bgee:O14764
CleanEx:HS_GABRD Genevestigator:O14764 GermOnline:ENSG00000187730
Uniprot:O14764
Length = 452
Score = 711 (255.3 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 131/288 (45%), Positives = 190/288 (65%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 47 LIAGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 106
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 107 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 166
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +++ESYGY+ D+V YW E+ + G+++ QL QFTI + T +
Sbjct: 167 DLAKYPMDEQECMLDLESYGYSSEDIVYYWSESQEHIHGLDKLQLAQFTITSYRFTTELM 226
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXX 289
+ G + RLSL F L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+
Sbjct: 227 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 286
Query: 290 XXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 287 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 334
Score = 42 (19.8 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 313 IDIYLVMCFVFVFAALLEYAAVNYSYWA 340
IDIY VF A +AAVN YWA
Sbjct: 427 IDIYARA----VFPAA--FAAVNVIYWA 448
>UNIPROTKB|G3V875 [details] [associations]
symbol:Gabrq "Gamma-aminobutyric acid A receptor, theta,
isoform CRA_b" species:10116 "Rattus norvegicus" [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008101 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01725 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 OMA:FFHQTWK PANTHER:PTHR18945:SF87
EMBL:CH474110 UniGene:Rn.81067 ProteinModelPortal:G3V875
Ensembl:ENSRNOT00000022880 RGD:68331 Uniprot:G3V875
Length = 640
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 133/312 (42%), Positives = 205/312 (65%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + K+ E A V + + ++L YD+RLRPNFGG P+ V + + ++S + ISE++M
Sbjct: 45 LDLFNCKNCANE--AVVQKILDRVLSTYDVRLRPNFGGAPVPVSISIYVSSIEQISEINM 102
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM+L+Q WKD RLA+ + LTL EK+WVPD +F N K++F+HDVT N++
Sbjct: 103 DYTITMFLHQTWKDTRLAYYETNLNLTLDYRMHEKLWVPDCYFVNSKDAFVHDVTAENRV 162
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TPVR 208
+L+ DG++ YG+R TTT AC +DL +P+D Q+C +E+ESYGYTV D+V+ W++ +
Sbjct: 163 FQLHPDGTVQYGIRLTTTAACSLDLQKFPMDKQSCKLEVESYGYTVEDIVLSWEDDNAIH 222
Query: 209 GVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLS 268
+E +PQ+T LG ++ TG+Y RL + F++QR + ++ Q Y P++L +LS
Sbjct: 223 ITDELHIPQYTYLGRTITSKEVYFYTGSYMRLIVKFQVQREVRSYLVQVYWPTVLTTILS 282
Query: 269 WVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAAL 328
W+SFW+N+ +++ARV R LP IS +KAIDIY+++C FVF +L
Sbjct: 283 WISFWMNYGSSAARVTIGLTSILVLTTIDSHMRDKLPHISCIKAIDIYILVCLFFVFLSL 342
Query: 329 LEYAAVNYSYWA 340
LEY +NY +++
Sbjct: 343 LEYVYINYLFFS 354
>UNIPROTKB|E2R3M6 [details] [associations]
symbol:GABRD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 CTD:2563 KO:K05184
GeneTree:ENSGT00630000089571 EMBL:AAEX03003861 RefSeq:XP_546729.3
ProteinModelPortal:E2R3M6 Ensembl:ENSCAFT00000030791 GeneID:489609
KEGG:cfa:489609 NextBio:20862765 Uniprot:E2R3M6
Length = 456
Score = 711 (255.3 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 133/288 (46%), Positives = 187/288 (64%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + + +AS D ISEV+M+YT+T++L+Q W+D RLA++ +
Sbjct: 47 LMDGYARNFRPGIGGPPVNVALAIEVASIDHISEVNMEYTMTVFLHQSWRDSRLAYNHTN 106
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 107 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 166
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILG-HETNDRK 229
DL YP+D Q C + +ESYGY+ D+V YW E + G+ + QL QFTI H +
Sbjct: 167 DLAKYPMDEQECMLHLESYGYSSEDIVYYWSENQEQIHGLNKLQLAQFTITSYHFATELM 226
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXX 289
+ G + RLSL F L+RN G ++ Q+Y+PSIL+V +SWVSFWI+ A ARV+
Sbjct: 227 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSILLVAMSWVSFWISQAAVPARVSLGITT 286
Query: 290 XXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 287 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 334
Score = 40 (19.1 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 313 IDIYLVMCFVFVFAALLEYAAVNYSYWA 340
IDIY + VF A + AVN YWA
Sbjct: 431 IDIYARV----VFPAA--FVAVNVLYWA 452
>UNIPROTKB|Q9UN88 [details] [associations]
symbol:GABRQ "Gamma-aminobutyric acid receptor subunit
theta" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004888 "transmembrane
signaling receptor activity" evidence=TAS] [GO:0005326
"neurotransmitter transporter activity" evidence=TAS] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0006836 "neurotransmitter
transport" evidence=TAS] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008101
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01725 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
GO:GO:0004888 EMBL:CH471169 GO:GO:0005326 CTD:55879 EMBL:AF189259
EMBL:AF002997 EMBL:BC109210 EMBL:BC109211 EMBL:AF144648
IPI:IPI00297913 RefSeq:NP_061028.2 UniGene:Hs.283081
ProteinModelPortal:Q9UN88 SMR:Q9UN88 STRING:Q9UN88
PhosphoSite:Q9UN88 DMDM:13959382 PRIDE:Q9UN88
Ensembl:ENST00000370306 GeneID:55879 KEGG:hsa:55879 UCSC:uc004ffp.1
GeneCards:GC0XP151806 H-InvDB:HIX0056145 HGNC:HGNC:14454
HPA:HPA002063 MIM:300349 neXtProt:NX_Q9UN88 PharmGKB:PA28504
eggNOG:NOG317370 HOGENOM:HOG000049189 HOVERGEN:HBG051708
InParanoid:Q9UN88 KO:K05192 OMA:FFHQTWK OrthoDB:EOG48SGSN
PhylomeDB:Q9UN88 BindingDB:Q9UN88 ChEMBL:CHEMBL2843
GenomeRNAi:55879 NextBio:61204 ArrayExpress:Q9UN88 Bgee:Q9UN88
CleanEx:HS_GABRQ Genevestigator:Q9UN88 GermOnline:ENSG00000147402
PANTHER:PTHR18945:SF87 Uniprot:Q9UN88
Length = 632
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 133/313 (42%), Positives = 201/313 (64%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L L + K+ E A V + + ++L YD+RLRPNFGG P+ V + + + S + ISE++M
Sbjct: 45 LNLFNCKNCANE--AVVQKILDRVLSRYDVRLRPNFGGAPVPVRISIYVTSIEQISEMNM 102
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYTITM+ +Q WKD RLA+ LTL EK+WVPD +F N K++F+HDVT N++
Sbjct: 103 DYTITMFFHQTWKDSRLAYYETTLNLTLDYRMHEKLWVPDCYFLNSKDAFVHDVTVENRV 162
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET--PV 207
+L+ DG++ YG+R TTT AC +DLH +P+D Q C + +ESYGYTV D++++W + +
Sbjct: 163 FQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNLVVESYGYTVEDIILFWDDNGNAI 222
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
EE +PQFT LG ++ TG+Y RL L F++QR + ++ Q Y P++L +
Sbjct: 223 HMTEELHIPQFTFLGRTITSKEVYFYTGSYIRLILKFQVQREVNSYLVQVYWPTVLTTIT 282
Query: 268 SWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAA 327
SW+SFW+N+++++ARV R LP IS +KAIDIY+++C FVF +
Sbjct: 283 SWISFWMNYDSSAARVTIGLTSMLILTTIDSHLRDKLPNISCIKAIDIYILVCLFFVFLS 342
Query: 328 LLEYAAVNYSYWA 340
LLEY +NY +++
Sbjct: 343 LLEYVYINYLFYS 355
>MGI|MGI:1888498 [details] [associations]
symbol:Gabrq "gamma-aminobutyric acid (GABA) A receptor,
subunit theta" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISS] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006821 "chloride transport" evidence=ISS] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008101
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01725 PROSITE:PS00236 MGI:MGI:1888498
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 GeneTree:ENSGT00630000089685 CTD:55879
eggNOG:NOG317370 HOGENOM:HOG000049189 HOVERGEN:HBG051708 KO:K05192
OrthoDB:EOG48SGSN PANTHER:PTHR18945:SF87 EMBL:AF189260
IPI:IPI00124252 RefSeq:NP_065234.1 UniGene:Mm.117125
UniGene:Mm.487532 ProteinModelPortal:Q9JLF1 SMR:Q9JLF1
PhosphoSite:Q9JLF1 PRIDE:Q9JLF1 Ensembl:ENSMUST00000033711
GeneID:57249 KEGG:mmu:57249 InParanoid:Q9JLF1 BindingDB:Q9JLF1
ChEMBL:CHEMBL3249 NextBio:313527 Bgee:Q9JLF1 Genevestigator:Q9JLF1
GermOnline:ENSMUSG00000031344 Uniprot:Q9JLF1
Length = 638
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 134/322 (41%), Positives = 210/322 (65%)
Query: 21 QIGNSDSEK-LRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIA 79
++ +S E L L + K+ E A V + + ++L YD+RLRPNFGG P+ V + + ++
Sbjct: 35 ELSSSTPEVILDLFNCKNCANE--AVVQKILDRVLSTYDVRLRPNFGGAPVPVSVSIYVS 92
Query: 80 SFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSF 139
S + ISE++MDYTITM+L+Q WKD RLA+ + LTL EK+WVPD +F N K++F
Sbjct: 93 SIEQISEINMDYTITMFLHQTWKDTRLAYYETNLNLTLDYRMHEKLWVPDCYFVNSKDAF 152
Query: 140 LHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVV 199
+HDVT N++ +L+ DG++ YG+R TTT AC +DL +P+D Q+C +E+ESYGYTV D+V
Sbjct: 153 VHDVTVENRVFQLHPDGTVRYGIRLTTTAACSLDLQKFPMDKQSCKLEVESYGYTVEDIV 212
Query: 200 MYWKE-TPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTY 258
+ W++ + + +PQ+T LG ++ TG+Y RL + F++QR + ++ Q Y
Sbjct: 213 LSWEDDNAIHITDGLHIPQYTYLGRTITSKEVYFYTGSYMRLIVKFQVQREVRSYLVQVY 272
Query: 259 LPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLV 318
P++L +LSW+SFW+N+++++ARV R LP IS +KAIDIY++
Sbjct: 273 WPTVLTTILSWISFWMNYDSSAARVTIGLTSILVLTTIDSHMRDKLPHISCIKAIDIYIL 332
Query: 319 MCFVFVFAALLEYAAVNYSYWA 340
+C FVF +LLEY +NY +++
Sbjct: 333 VCLFFVFLSLLEYVYINYLFFS 354
>UNIPROTKB|A2VE38 [details] [associations]
symbol:GABRD "Gamma-aminobutyric acid (GABA) A receptor,
delta" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008098 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01722 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2563 eggNOG:NOG308574
KO:K05184 OMA:EYTMTVF OrthoDB:EOG4H9XKN
GeneTree:ENSGT00630000089571 EMBL:DAAA02043224 EMBL:BC133557
IPI:IPI00710785 RefSeq:NP_001075184.1 UniGene:Bt.25568
Ensembl:ENSBTAT00000011434 GeneID:508711 KEGG:bta:508711
InParanoid:A2VE38 NextBio:20868645 Uniprot:A2VE38
Length = 450
Score = 704 (252.9 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 130/288 (45%), Positives = 188/288 (65%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG + V + + +AS D ISEV+M+YT+T++L+Q W+D RL+++ +
Sbjct: 46 LIEGYARNFRPGIGGPAVNVALAIEVASIDHISEVNMEYTMTVFLHQSWRDSRLSYNHTN 105
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 106 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 165
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C + +ESYGY+ D+V YW E + G+++ QL QFTI + T +
Sbjct: 166 DLAKYPMDEQECMLHLESYGYSSEDIVYYWSENQEQIHGLDKLQLAQFTITSYRFTTELM 225
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXX 289
+ G + RLSL F L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+
Sbjct: 226 NFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 285
Query: 290 XXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 286 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 333
Score = 42 (19.8 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 313 IDIYLVMCFVFVFAALLEYAAVNYSYWA 340
IDIY VF A +AAVN YWA
Sbjct: 425 IDIYARA----VFPAA--FAAVNVIYWA 446
>WB|WBGene00017389 [details] [associations]
symbol:lgc-38 species:6239 "Caenorhabditis elegans"
[GO:0004890 "GABA-A receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:FO080391
GeneTree:ENSGT00630000089685 HSSP:P23415 eggNOG:NOG265706 KO:K05195
HOGENOM:HOG000231336 PIR:T16035 RefSeq:NP_498532.3
ProteinModelPortal:Q19358 SMR:Q19358 PaxDb:Q19358
EnsemblMetazoa:F11H8.2 GeneID:3565717 KEGG:cel:CELE_F11H8.2
UCSC:F11H8.2 CTD:3565717 WormBase:F11H8.2 InParanoid:Q19358
OMA:RESIIEP NextBio:957591 Uniprot:Q19358
Length = 459
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 130/294 (44%), Positives = 189/294 (64%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NVT+ + +L+ +D R+RPN+GG P+ V + + + ++SEVSMDYT+ +YL Q WKD
Sbjct: 50 NVTRLLDKLIASHDRRIRPNYGGPPIEVNITAHVTTISAVSEVSMDYTLDLYLRQIWKDP 109
Query: 105 RLAFSSE-DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RLA+ S+ ++ LT+ D + IW PDTFF N+K SF H+ T N +R++ G++ +R
Sbjct: 110 RLAWESDVEDSLTIGIDMVKTIWTPDTFFPNEKKSFFHEATSHNSFLRIDNHGNVLRSIR 169
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEE-AQLPQFTILG 222
T T C M LH +PLD Q C +E+ESYGY+ D++ +W T ++E L FTI
Sbjct: 170 LTVTANCPMSLHTFPLDRQECALEVESYGYSTKDIIYHWHGTNAVTIDENVHLAHFTIGE 229
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
H+ +R L+TG Y RL+ F +RNIG+++ Q Y PS LIV++SWVSFW+N EA AR
Sbjct: 230 HKHIERTISLSTGNYSRLTAYFLFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQAR 289
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
VA +SLP++SYVK++D++L +CF VFA+LLEYAA+ Y
Sbjct: 290 VAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDVFLGVCFFIVFASLLEYAAIGY 343
>UNIPROTKB|E1C7Q7 [details] [associations]
symbol:E1C7Q7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
EMBL:AADN02046491 EMBL:AADN02046492 EMBL:AADN02046493
EMBL:AADN02046494 EMBL:AADN02046495 IPI:IPI00602664
ProteinModelPortal:E1C7Q7 Ensembl:ENSGALT00000011429 OMA:VKNPYHI
Uniprot:E1C7Q7
Length = 437
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 134/291 (46%), Positives = 191/291 (65%)
Query: 49 TISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF 108
TI ++ GY+ LRP F P+ VGM L IAS D+ISE++MDYT T++L Q W D+RL F
Sbjct: 36 TIQNIIKGYNKYLRPFFDNGPVSVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLCF 95
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
++ L+L G E +WVPDTF + K SFLHD+T N+L+R+ +G++ Y +R TTT+
Sbjct: 96 DG-NKSLSLDGRLVEMLWVPDTFIVDSKKSFLHDITVENRLIRIYPNGTVLYAIRITTTV 154
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
AC MDL YP+D Q CT+++ES+GY + DV+ YW VRG++ QL Q+T+ H T+
Sbjct: 155 ACSMDLTKYPMDKQTCTLQLESWGYNINDVMFYWTRGNDSVRGLDTLQLAQYTVEDHFTS 214
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXX 286
+ TG Y +L F+L+RNI YF+ +TY+PSIL+V+LSWVSFWI+ + AR+
Sbjct: 215 VSEAVYETGRYPKLVFHFELKRNILYFILETYVPSILLVVLSWVSFWISQSSVPARICIG 274
Query: 287 XXXXXXXXXXXXXXRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP + ++KAID+YL +CF F+F ALLEYA ++
Sbjct: 275 VTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALLEYAVAHF 325
>ZFIN|ZDB-GENE-080303-26 [details] [associations]
symbol:zgc:171544 "zgc:171544" species:7955 "Danio
rerio" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008100 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236
ZFIN:ZDB-GENE-080303-26 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571 EMBL:AL732488
EMBL:BX248124 EMBL:CT573003 IPI:IPI00886548
ProteinModelPortal:F1QZB5 Ensembl:ENSDART00000076322 OMA:GSVANTE
Bgee:F1QZB5 Uniprot:F1QZB5
Length = 447
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 137/309 (44%), Positives = 197/309 (63%)
Query: 31 RLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMD 90
R+ A TE + + TI +L+ GY+ LRP FG P+ VGM L IAS D+ISE++MD
Sbjct: 18 RIMDGSVANTEEI--LPPTIQKLMKGYNKYLRPFFGNGPVTVGMSLDIASIDTISEINMD 75
Query: 91 YTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLV 150
YT T++L Q W D+RL F ++ L+L G E +WVPDTF + K SFLHD+T N+L+
Sbjct: 76 YTATIFLRQRWTDERLCFDG-NKSLSLDGRLVELLWVPDTFIVDSKKSFLHDITVENRLI 134
Query: 151 RLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVR 208
R+ +G++ Y +R TTT+AC MDL YP+D Q C +++ES+GY V DVV YW V
Sbjct: 135 RIFPNGTVLYALRITTTVACSMDLTKYPMDRQTCMLQLESWGYNVKDVVFYWTRGNQSVS 194
Query: 209 GVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLS 268
G++ QL Q+T+ H T++ + TG Y +L FKL+R+I YF+ +TY+PS +V+LS
Sbjct: 195 GLDHLQLAQYTLEDHYTSESEAVYETGNYPKLIFHFKLKRSILYFILETYVPSSALVVLS 254
Query: 269 WVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRIS-YVKAIDIYLVMCFVFVFAA 327
WVSFWI+ + AR+ R+SLP + ++KAID+YL +CF F+F A
Sbjct: 255 WVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFGA 314
Query: 328 LLEYAAVNY 336
L+EYA ++
Sbjct: 315 LIEYAVAHF 323
>UNIPROTKB|F1Q344 [details] [associations]
symbol:GABRD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 OMA:EYTMTVF
GeneTree:ENSGT00630000089571 EMBL:AAEX03003861
Ensembl:ENSCAFT00000035570 Uniprot:F1Q344
Length = 488
Score = 625 (225.1 bits), Expect = 3.7e-71, Sum P(3) = 3.7e-71
Identities = 116/251 (46%), Positives = 164/251 (65%)
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
+YT+T++L+Q W+D RLA++ +E L L F +K+W+PDTF N K+++ HDVT NKL
Sbjct: 116 EYTMTVFLHQSWRDSRLAYNHTNETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKL 175
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--V 207
+RL DG I Y +R T+T+AC MDL YP+D Q C + +ESYGY+ D+V YW E +
Sbjct: 176 IRLQPDGVILYSIRITSTVACDMDLAKYPMDEQECMLHLESYGYSSEDIVYYWSENQEQI 235
Query: 208 RGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVM 266
G+ + QL QFTI H + + G + RLSL F L+RN G ++ Q+Y+PSIL+V
Sbjct: 236 HGLNKLQLAQFTITSYHFATELMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSILLVA 295
Query: 267 LSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFA 326
+SWVSFWI+ A ARV+ RSSLPR S +KA+D+Y +C+VFVFA
Sbjct: 296 MSWVSFWISQAAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFA 355
Query: 327 ALLEYAAVNYS 337
AL+EYA +++
Sbjct: 356 ALVEYAFAHFN 366
Score = 86 (35.3 bits), Expect = 3.7e-71, Sum P(3) = 3.7e-71
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM 89
L+ GY RP GG P+ V + + +AS D ISEV+M
Sbjct: 47 LMDGYARNFRPGIGGPPVNVALAIEVASIDHISEVNM 83
Score = 40 (19.1 bits), Expect = 3.7e-71, Sum P(3) = 3.7e-71
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 313 IDIYLVMCFVFVFAALLEYAAVNYSYWA 340
IDIY + VF A + AVN YWA
Sbjct: 463 IDIYARV----VFPAA--FVAVNVLYWA 484
>UNIPROTKB|Q9BLY8 [details] [associations]
symbol:Rdl "Gamma-aminobutyric acid receptor subunit beta"
species:7240 "Drosophila simulans" [GO:0006811 "ion transport"
evidence=ISS] [GO:0007268 "synaptic transmission" evidence=ISS]
[GO:0030594 "neurotransmitter receptor activity" evidence=ISS]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0006811 GO:GO:0034707
GO:GO:0005254 OrthoDB:EOG44B8HM EMBL:AY017266
ProteinModelPortal:Q9BLY8 FlyBase:FBgn0012851 Uniprot:Q9BLY8
Length = 606
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 136/296 (45%), Positives = 185/296 (62%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 117
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 118 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 177
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR-GVE-EAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P GV E LPQF +
Sbjct: 178 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 237
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 238 LGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATP 297
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVA ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 298 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 353
>FB|FBgn0004244 [details] [associations]
symbol:Rdl "Resistant to dieldrin" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0046682 "response to cyclodiene" evidence=NAS] [GO:0004890
"GABA-A receptor activity" evidence=IEA;NAS;TAS] [GO:0016021
"integral to membrane" evidence=IEA;NAS] [GO:0050805 "negative
regulation of synaptic transmission" evidence=IMP] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0009612 "response to mechanical
stimulus" evidence=IGI] [GO:0030424 "axon" evidence=IDA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0090328 "regulation of
olfactory learning" evidence=IMP] [GO:0030431 "sleep" evidence=IMP]
[GO:0042749 "regulation of circadian sleep/wake cycle"
evidence=IMP] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 EMBL:AE014296 GO:GO:0009612 GO:GO:0030431
GO:GO:0030594 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0006811
GO:GO:0030425 GO:GO:0050805 GO:GO:0034707 GO:GO:0005254
GeneTree:ENSGT00630000089685 EMBL:M69057 EMBL:U02042 EMBL:AY051418
EMBL:S61113 PIR:A41145 RefSeq:NP_523991.2 RefSeq:NP_729461.1
RefSeq:NP_729462.2 ProteinModelPortal:P25123 SMR:P25123
STRING:P25123 PaxDb:P25123 EnsemblMetazoa:FBtr0076536 GeneID:39054
KEGG:dme:Dmel_CG10537 CTD:39054 FlyBase:FBgn0004244
eggNOG:NOG265706 InParanoid:P25123 KO:K05195 OMA:GGMFGDV
OrthoDB:EOG44B8HM PhylomeDB:P25123 ChiTaRS:Rdl GenomeRNAi:39054
NextBio:811688 Bgee:P25123 GermOnline:CG10537 GO:GO:0042749
GO:GO:0090328 Uniprot:P25123
Length = 606
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 133/296 (44%), Positives = 187/296 (63%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDP 117
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 118 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 177
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ +W++ + V E +LPQF +
Sbjct: 178 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRV 237
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 238 LGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATP 297
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVA ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 298 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 353
>UNIPROTKB|Q75NA5 [details] [associations]
symbol:Rdl "Gamma-aminobutyric acid receptor subunit beta"
species:7370 "Musca domestica" [GO:0001505 "regulation of
neurotransmitter levels" evidence=ISS] [GO:0006836
"neurotransmitter transport" evidence=ISS] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISS]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISS]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISS]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030285
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006836
GO:GO:0034707 GO:GO:0005254 GO:GO:0001505 GO:GO:0008503 HSSP:P23415
EMBL:AB177547 EMBL:AF070935 ProteinModelPortal:Q75NA5
BindingDB:Q75NA5 ChEMBL:CHEMBL3986 DrugBank:DB00431 Uniprot:Q75NA5
Length = 576
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 136/296 (45%), Positives = 185/296 (62%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N++ + YD R+RPN+GG P+ VG+ + + S S+SEV MD+T+ Y Q+W D
Sbjct: 56 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 115
Query: 105 RLAFSSEDEVLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
RLA+ V TLS +F + IWVPDTFF N+K S+ H T N+ +R++ GSIT +
Sbjct: 116 RLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSI 175
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR-GVE-EAQLPQFTI 220
R T T +C M+L Y+P+D Q C +EIES+GYT+ D+ W E P GV E LPQF +
Sbjct: 176 RLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEVSLPQFKV 235
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LGH + L TG Y RL+ + R++GY++ Q Y+PS LIV++SWVSFW+N AT
Sbjct: 236 LGHRQRAVEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWLNRNATP 295
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARVA ++LP+ISYVK+ID+YL CFV VFA+LLEYA V Y
Sbjct: 296 ARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGY 351
>MGI|MGI:95622 [details] [associations]
symbol:Gabrd "gamma-aminobutyric acid (GABA) A receptor,
subunit delta" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 MGI:MGI:95622 GO:GO:0005886
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2563 eggNOG:NOG308574
KO:K05184 OMA:EYTMTVF OrthoDB:EOG4H9XKN EMBL:AH001900 EMBL:S42882
IPI:IPI00323796 PIR:A36303 PIR:I52630 RefSeq:NP_032098.2
UniGene:Mm.388925 ProteinModelPortal:P22933 SMR:P22933
STRING:P22933 PhosphoSite:P22933 PRIDE:P22933
Ensembl:ENSMUST00000030925 GeneID:14403 KEGG:mmu:14403
InParanoid:P22933 BindingDB:P22933 ChEMBL:CHEMBL3907 NextBio:285959
Bgee:P22933 Genevestigator:P22933 GermOnline:ENSMUSG00000029054
Uniprot:P22933
Length = 449
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 132/288 (45%), Positives = 189/288 (65%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 47 LMEGYARNFRPGIGGAPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 106
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 107 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 166
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHE-TNDRK 229
DL YPLD Q C +++ESYGY+ D+V YW E + G++ QL QFTI + T +
Sbjct: 167 DLAKYPLDEQECMLDLESYGYSSEDIVYYWSENQEQIHGLDRLQLAQFTITSYRFTTELM 226
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXX 289
+ G + RLSL F+L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+
Sbjct: 227 NFKSAGQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 286
Query: 290 XXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 287 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 334
>UNIPROTKB|I3LKA9 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007601 "visual perception" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0007601 GeneTree:ENSGT00630000089571 OMA:GFRIFQN
EMBL:CU075926 Ensembl:ENSSSCT00000028234 Uniprot:I3LKA9
Length = 488
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 139/318 (43%), Positives = 199/318 (62%)
Query: 23 GNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFD 82
G ++ K +KK+ ++ N + +D +RP FGG + VG+D+ + S D
Sbjct: 53 GQLETSKPSHLYKKNLDMTKIRNGKPQPLLRVDDHDFTMRPAFGGPAIPVGVDVQVESLD 112
Query: 83 SISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLH 141
SISEV MD+T+T+YL YWKD+RLAF S+ ++ +T G +KIWVPD FF + K SF+H
Sbjct: 113 SISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSMTFDGRLVKKIWVPDVFFVHSKRSFIH 172
Query: 142 DVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMY 201
D T N ++R+ DG + Y MR T T C MD ++PLD+Q C++E+ESY YT D+++Y
Sbjct: 173 DTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLY 232
Query: 202 WK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQTY 258
WK + ++ E+ L QF I T R + TG Y RL ++F L+R+I +F+ QTY
Sbjct: 233 WKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTY 292
Query: 259 LPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLV 318
P+ L+VMLSWVSFWI+ A ARV+ +S+PR+SY+KA+DIYL
Sbjct: 293 FPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLW 352
Query: 319 MCFVFVFAALLEYAAVNY 336
+ FVFVF ++LEYAAVNY
Sbjct: 353 VSFVFVFLSVLEYAAVNY 370
>RGD|61901 [details] [associations]
symbol:Gabrd "gamma-aminobutyric acid (GABA) A receptor, delta"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 RGD:61901 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707
HOGENOM:HOG000231335 CTD:2563 eggNOG:NOG308574 KO:K05184 OMA:EYTMTVF
OrthoDB:EOG4H9XKN EMBL:L08496 EMBL:BC087714 EMBL:M35162
IPI:IPI00192644 PIR:A34625 RefSeq:NP_058985.1 UniGene:Rn.10927
ProteinModelPortal:P18506 STRING:P18506 Ensembl:ENSRNOT00000022246
GeneID:29689 KEGG:rno:29689 GeneTree:ENSGT00630000089571
InParanoid:P18506 BindingDB:P18506 ChEMBL:CHEMBL337 NextBio:610071
ArrayExpress:P18506 Genevestigator:P18506
GermOnline:ENSRNOG00000016385 Uniprot:P18506
Length = 449
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 131/288 (45%), Positives = 189/288 (65%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L+ GY RP GG P+ V + L +AS D ISE +M+YT+T++L+Q W+D RL+++ +
Sbjct: 47 LMEGYARNFRPGIGGPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSYNHTN 106
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
E L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I Y +R T+T+AC M
Sbjct: 107 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDM 166
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHE-TNDRK 229
DL YP+D Q C +++ESYGY+ D+V YW E + G++ QL QFTI + T +
Sbjct: 167 DLAKYPMDEQECMLDLESYGYSSEDIVYYWSENQEQIHGLDRLQLAQFTITSYRFTTELM 226
Query: 230 EKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXX 289
+ G + RLSL F+L+RN G ++ Q+Y+PS+L+V +SWVSFWI+ A ARV+
Sbjct: 227 NFKSAGQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITT 286
Query: 290 XXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +++
Sbjct: 287 VLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFN 334
>MGI|MGI:95626 [details] [associations]
symbol:Gabrr2 "gamma-aminobutyric acid (GABA) C receptor,
subunit rho 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO;IMP] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=TAS]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IMP] [GO:0007601 "visual perception" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030424 "axon" evidence=TAS] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=IMP] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
MGI:MGI:95626 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0007601 EMBL:CH466538 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571 KO:K05190
OrthoDB:EOG4RJG1G CTD:2570 OMA:GFRIFQN EMBL:AF024621 EMBL:BC057957
IPI:IPI00113786 RefSeq:NP_032102.2 UniGene:Mm.6227
ProteinModelPortal:P56476 STRING:P56476 PhosphoSite:P56476
PRIDE:P56476 Ensembl:ENSMUST00000024035 Ensembl:ENSMUST00000108162
GeneID:14409 KEGG:mmu:14409 InParanoid:Q6PEP0 ChEMBL:CHEMBL2220
NextBio:285985 Bgee:P56476 Genevestigator:P56476
GermOnline:ENSMUSG00000023267 Uniprot:P56476
Length = 465
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 134/284 (47%), Positives = 188/284 (66%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YW+D+RLAF SS ++ +
Sbjct: 64 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSNKSM 123
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y MR T T C MD
Sbjct: 124 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 183
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 184 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 243
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXX 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+H A ARV+
Sbjct: 244 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLT 303
Query: 293 XXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+S+PR+SY++A+DIYL + FVFVF ++LEYAAVNY
Sbjct: 304 MSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVLEYAAVNY 347
>RGD|61902 [details] [associations]
symbol:Gabrr2 "gamma-aminobutyric acid (GABA) A receptor, rho 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=ISO;IDA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=TAS] [GO:0005254
"chloride channel activity" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA;ISO] [GO:0007601 "visual perception"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=ISO] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 RGD:61902 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707 GO:GO:0005237
eggNOG:NOG77438 HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571
KO:K05190 OrthoDB:EOG4RJG1G CTD:2570 EMBL:D38494 IPI:IPI00231130
PIR:I56523 RefSeq:NP_058988.1 UniGene:Rn.48659 STRING:P47742
Ensembl:ENSRNOT00000009973 GeneID:29695 KEGG:rno:29695
UCSC:RGD:61902 InParanoid:P47742 OMA:KIRTGKP BindingDB:P47742
ChEMBL:CHEMBL2953 NextBio:610094 Genevestigator:P47742
GermOnline:ENSRNOG00000007490 Uniprot:P47742
Length = 465
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 138/318 (43%), Positives = 198/318 (62%)
Query: 23 GNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFD 82
G+ ++ K +KK+ ++ + +D +RP FGG + VG+D+ + S D
Sbjct: 30 GHLETSKPSHLYKKNLDVTKIRTGKPRPLLRVEDHDFTMRPAFGGPAIPVGVDVQVESLD 89
Query: 83 SISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLH 141
SISEV MD+T+T+YL YW+D+RLAF SS + +T G +KIWVPD FF + K SF H
Sbjct: 90 SISEVDMDFTMTLYLRHYWRDERLAFPSSSNRSMTFDGRLVKKIWVPDVFFVHSKRSFTH 149
Query: 142 DVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMY 201
D T N ++R+ DG + Y MR T T C MD ++PLD+Q C++E+ESY YT D+++Y
Sbjct: 150 DTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLY 209
Query: 202 WK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQTY 258
WK + ++ E+ L QF I T R + TG Y RL ++F L+R+I +F+ QTY
Sbjct: 210 WKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTY 269
Query: 259 LPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLV 318
P+ L+VMLSWVSFWI+H A ARV+ +S+PR+SY++A+DIYL
Sbjct: 270 FPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLTMSTIITGVNASMPRVSYIRAVDIYLW 329
Query: 319 MCFVFVFAALLEYAAVNY 336
+ FVFVF ++LEYAAVNY
Sbjct: 330 VSFVFVFLSVLEYAAVNY 347
>UNIPROTKB|Q0II76 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 KO:K05190 OrthoDB:EOG4RJG1G EMBL:BC122770
IPI:IPI00694785 RefSeq:NP_001071414.2 UniGene:Bt.74488
GeneID:522099 KEGG:bta:522099 CTD:2570 InParanoid:Q0II76
NextBio:20873445 Uniprot:Q0II76
Length = 465
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 138/318 (43%), Positives = 199/318 (62%)
Query: 23 GNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFD 82
G ++ K +KK+ ++ + + +D +RP FGG + VG+D+ + S D
Sbjct: 30 GQLETSKPSHLYKKNPDMTKIRHGKPQPLLRVDDHDFTMRPAFGGPAIPVGVDVQVESLD 89
Query: 83 SISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLH 141
SISEV MD+T+T+YL YWKD+RLAF S+ ++ +T G +KIWVPD FF + K SF+H
Sbjct: 90 SISEVDMDFTMTLYLRHYWKDERLAFPSASNKSMTFDGRLVKKIWVPDVFFVHSKRSFIH 149
Query: 142 DVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMY 201
D T N ++R+ DG + Y MR T T C MD ++PLD+Q C++E+ESY YT D+++Y
Sbjct: 150 DTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLY 209
Query: 202 WK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQTY 258
WK + ++ E+ L QF I T R + TG Y RL ++F L+R+I +F+ QTY
Sbjct: 210 WKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTY 269
Query: 259 LPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLV 318
P+ L+VMLSWVSFWI+ A ARV+ +S+PR+SY+KA+DIYL
Sbjct: 270 FPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLW 329
Query: 319 MCFVFVFAALLEYAAVNY 336
+ FVFVF ++LEYAAVNY
Sbjct: 330 VSFVFVFLSVLEYAAVNY 347
>UNIPROTKB|P28476 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
GO:GO:0005887 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0007601 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05190
OrthoDB:EOG4RJG1G CTD:2570 EMBL:M86868 EMBL:AL121833 EMBL:BC130352
EMBL:BC130354 IPI:IPI00293005 PIR:A38079 RefSeq:NP_002034.3
UniGene:Hs.719891 ProteinModelPortal:P28476 STRING:P28476
PhosphoSite:P28476 DMDM:306526281 PRIDE:P28476 DNASU:2570
Ensembl:ENST00000402938 GeneID:2570 KEGG:hsa:2570 UCSC:uc003pnb.2
GeneCards:GC06M089967 H-InvDB:HIX0200918 HGNC:HGNC:4091
HPA:HPA016467 MIM:137162 neXtProt:NX_P28476 PharmGKB:PA28506
InParanoid:P28476 OMA:GFRIFQN PhylomeDB:P28476 BindingDB:P28476
ChEMBL:CHEMBL2375 ChiTaRS:GABRR2 GenomeRNAi:2570 NextBio:10165
ArrayExpress:P28476 Bgee:P28476 Genevestigator:P28476
GermOnline:ENSG00000111886 Uniprot:P28476
Length = 465
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 136/284 (47%), Positives = 186/284 (65%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAFSS ++ +
Sbjct: 64 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSM 123
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 124 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 183
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 184 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 243
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXX 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+
Sbjct: 244 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 303
Query: 293 XXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+S+PR+SYVKA+DIYL + FVFVF ++LEYAAVNY
Sbjct: 304 MTTIITGVNASMPRVSYVKAVDIYLWVSFVFVFLSVLEYAAVNY 347
>ZFIN|ZDB-GENE-081105-170 [details] [associations]
symbol:gabrd "gamma-aminobutyric acid (GABA) A
receptor, delta" species:7955 "Danio rerio" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 ZFIN:ZDB-GENE-081105-170
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 EMBL:FP017199 IPI:IPI00998683
Ensembl:ENSDART00000132000 ArrayExpress:E9QHL0 Bgee:E9QHL0
Uniprot:E9QHL0
Length = 469
Score = 683 (245.5 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 130/301 (43%), Positives = 190/301 (63%)
Query: 50 ISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSM----------DYTITMYLNQ 99
+ L+ GY RP GG P+ V M + +AS D ISE +M +YT+T++L Q
Sbjct: 45 LDDLMKGYARNFRPGIGGPPVNVAMAIEVASIDHISEANMRIDTDMFVLKEYTMTVFLRQ 104
Query: 100 YWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSIT 159
W+DDRL+++ ++ L L F +K+W+PDTF N K+++ HDVT NKL+RL DG I
Sbjct: 105 SWRDDRLSYNHTNKTLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVIL 164
Query: 160 YGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQ 217
Y R T+T+AC MDL YP+D Q C +++ESYGY+ D+V +W E+ + G+++ +L Q
Sbjct: 165 YSSRITSTVACDMDLTKYPMDEQECMLDLESYGYSSEDIVYHWSESQKLIHGLDKLELSQ 224
Query: 218 FTILGHE-TNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 276
FTI + + + G + RLSL F+L+RN G ++ Q+Y+PSIL+V +SWVSFWI+
Sbjct: 225 FTITDYRFVTEMMNFKSAGRFPRLSLRFQLRRNRGVYIIQSYMPSILLVAMSWVSFWISQ 284
Query: 277 EATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
A ARV+ RSSLPR S +KA+D+Y +C+VFVFAAL+EYA +Y
Sbjct: 285 SAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALIEYAFAHY 344
Query: 337 S 337
+
Sbjct: 345 N 345
Score = 41 (19.5 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 12/27 (44%), Positives = 12/27 (44%)
Query: 313 IDIYLVMCFVFVFAALLEYAAVNYSYW 339
IDIY F F FA VN YW
Sbjct: 444 IDIYARAVFPFTFAV------VNVIYW 464
>ZFIN|ZDB-GENE-081028-62 [details] [associations]
symbol:gabrp "gamma-aminobutyric acid (GABA) A
receptor, pi" species:7955 "Danio rerio" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236
ZFIN:ZDB-GENE-081028-62 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 EMBL:BX248097 IPI:IPI00495215
ProteinModelPortal:F1Q6Y8 Ensembl:ENSDART00000074819 Uniprot:F1Q6Y8
Length = 464
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 130/291 (44%), Positives = 189/291 (64%)
Query: 49 TISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF 108
TI +L+ GY+ LRPNF P+ +GM L IAS D+ISE++MDYT T++L Q W+D RL F
Sbjct: 57 TIQKLMKGYNRYLRPNFNEGPVEIGMSLDIASIDAISEINMDYTATIFLRQRWRDSRLIF 116
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
+E L+L G +W+PDTF + K SFLHDVT N+L+R+ +G++ Y +R T T+
Sbjct: 117 PG-NESLSLDGRLVSLLWIPDTFIPDSKRSFLHDVTVENRLIRIFSNGTVLYALRITATI 175
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
AC MDL YP+D Q CT+++ES+GY + DVV YW V+G++ +L Q+++ + T+
Sbjct: 176 ACNMDLTKYPMDRQECTLQLESWGYNLEDVVFYWTRGNDSVKGLDTLRLAQYSVESYYTS 235
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXX 286
K TG Y +L L F L+RN+ +F+ +TY+PS L+V+LSWVSFWI+ + AR
Sbjct: 236 VTKAVYETGLYPKLILHFALRRNVLFFILETYVPSTLLVVLSWVSFWISQSSVPARTCIG 295
Query: 287 XXXXXXXXXXXXXXRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP + ++KAID+YL +CF F+F ALLEYA ++
Sbjct: 296 VTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFTFIFGALLEYACAHF 346
>UNIPROTKB|E2R4R0 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007601 "visual perception" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GeneTree:ENSGT00630000089571 KO:K05190 CTD:2570 EMBL:AAEX03008512
EMBL:AAEX03008511 RefSeq:XP_539039.2 Ensembl:ENSCAFT00000004973
GeneID:481918 KEGG:cfa:481918 Uniprot:E2R4R0
Length = 490
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 134/284 (47%), Positives = 186/284 (65%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF S+ ++ +
Sbjct: 89 HDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSM 148
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF HD T N ++R+ DG + Y MR T T C MD
Sbjct: 149 TFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFS 208
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
++PLD+Q C++E+ESY YT D+++YWK + ++ E+ L QF I T R +
Sbjct: 209 HFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYS 268
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXX 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+
Sbjct: 269 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 328
Query: 293 XXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY
Sbjct: 329 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNY 372
>MGI|MGI:95625 [details] [associations]
symbol:Gabrr1 "gamma-aminobutyric acid (GABA) C receptor,
subunit rho 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016917 "GABA receptor activity"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008058
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671 PROSITE:PS00236
MGI:MGI:95625 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571 CTD:2569
KO:K05190 OrthoDB:EOG4RJG1G EMBL:AF024620 EMBL:AL670464
IPI:IPI00113785 RefSeq:NP_032101.3 UniGene:Mm.14116
ProteinModelPortal:P56475 SMR:P56475 STRING:P56475
PhosphoSite:P56475 PRIDE:P56475 Ensembl:ENSMUST00000029947
GeneID:14408 KEGG:mmu:14408 UCSC:uc008sfr.1 InParanoid:A3KG51
ChEMBL:CHEMBL2790 NextBio:285981 Bgee:P56475 Genevestigator:P56475
GermOnline:ENSMUSG00000028280 Uniprot:P56475
Length = 480
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 141/314 (44%), Positives = 196/314 (62%)
Query: 34 HKK-SATTERLANVTQT----ISQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISE 86
HK+ S R +++T++ QLL +D +RP FGG + VG+D+ + S DSISE
Sbjct: 55 HKQGSPILRRSSDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISE 114
Query: 87 VSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVTE 145
V MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 115 VDMDFTMTLYLRHYWKDERLSFPSSNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTT 174
Query: 146 RNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE- 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 175 DNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKG 234
Query: 205 -TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSI 262
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 235 NDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPAT 294
Query: 263 LIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFV 322
L+VMLSWVSFWI+ A ARV +S+PR+SY+KA+DIYL + FV
Sbjct: 295 LMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFV 354
Query: 323 FVFAALLEYAAVNY 336
FVF ++LEYAAVNY
Sbjct: 355 FVFLSVLEYAAVNY 368
>RGD|61900 [details] [associations]
symbol:Gabrr1 "gamma-aminobutyric acid (GABA) A receptor, rho 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007601 "visual perception" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016917 "GABA receptor activity"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008058 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671
PROSITE:PS00236 RGD:61900 GO:GO:0005886 GO:GO:0042803 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007601 GO:GO:0046982 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05190
OrthoDB:EOG4RJG1G EMBL:U21070 EMBL:X95579 IPI:IPI00199471
UniGene:Rn.33552 ProteinModelPortal:P50572 STRING:P50572
PhosphoSite:P50572 PRIDE:P50572 KEGG:rno:29694 UCSC:RGD:61900
InParanoid:P50572 BindingDB:P50572 ChEMBL:CHEMBL3588 NextBio:610090
ArrayExpress:P50572 Genevestigator:P50572
GermOnline:ENSRNOG00000007603 GO:GO:0016917 Uniprot:P50572
Length = 480
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 141/314 (44%), Positives = 197/314 (62%)
Query: 34 HKK-SATTERLANVTQT----ISQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISE 86
HK+ S +R +++T++ QLL +D +RP FGG + VG+D+ + S DSISE
Sbjct: 55 HKQGSPILKRSSDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISE 114
Query: 87 VSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVTE 145
V MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 115 VDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTT 174
Query: 146 RNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE- 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 175 DNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKG 234
Query: 205 -TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSI 262
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 235 NDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPAT 294
Query: 263 LIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFV 322
L+VMLSWVSFWI+ A ARV +S+PR+SY+KA+DIYL + FV
Sbjct: 295 LMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFV 354
Query: 323 FVFAALLEYAAVNY 336
FVF ++LEYAAVNY
Sbjct: 355 FVFLSVLEYAAVNY 368
>UNIPROTKB|P50572 [details] [associations]
symbol:Gabrr1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008058 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671
PROSITE:PS00236 RGD:61900 GO:GO:0005886 GO:GO:0042803 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007601 GO:GO:0046982 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 KO:K05190 OrthoDB:EOG4RJG1G EMBL:U21070
EMBL:X95579 IPI:IPI00199471 UniGene:Rn.33552
ProteinModelPortal:P50572 STRING:P50572 PhosphoSite:P50572
PRIDE:P50572 KEGG:rno:29694 UCSC:RGD:61900 InParanoid:P50572
BindingDB:P50572 ChEMBL:CHEMBL3588 NextBio:610090
ArrayExpress:P50572 Genevestigator:P50572
GermOnline:ENSRNOG00000007603 GO:GO:0016917 Uniprot:P50572
Length = 480
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 141/314 (44%), Positives = 197/314 (62%)
Query: 34 HKK-SATTERLANVTQT----ISQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISE 86
HK+ S +R +++T++ QLL +D +RP FGG + VG+D+ + S DSISE
Sbjct: 55 HKQGSPILKRSSDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISE 114
Query: 87 VSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVTE 145
V MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 115 VDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTT 174
Query: 146 RNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE- 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 175 DNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKG 234
Query: 205 -TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSI 262
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 235 NDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPAT 294
Query: 263 LIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFV 322
L+VMLSWVSFWI+ A ARV +S+PR+SY+KA+DIYL + FV
Sbjct: 295 LMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFV 354
Query: 323 FVFAALLEYAAVNY 336
FVF ++LEYAAVNY
Sbjct: 355 FVFLSVLEYAAVNY 368
>UNIPROTKB|F1ND89 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008058
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01671 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
OMA:RMMVQLA EMBL:AADN02002380 EMBL:AADN02002378 EMBL:AADN02002379
IPI:IPI00595666 Ensembl:ENSGALT00000025445 Uniprot:F1ND89
Length = 438
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 141/314 (44%), Positives = 196/314 (62%)
Query: 34 HKK-SATTERLANVTQT----ISQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISE 86
HK+ S +R ++T++ QLL +D +RP FGG + VG+D+ + S DSISE
Sbjct: 15 HKQGSPILKRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISE 74
Query: 87 VSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTE 145
V MD+T+T+YL YWKD+RL+F S+ ++ +T G +KIWVPD FF + K SF+HD T
Sbjct: 75 VDMDFTMTLYLRHYWKDERLSFPSTNNQSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTT 134
Query: 146 RNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE- 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK
Sbjct: 135 DNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKNG 194
Query: 205 -TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSI 262
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 195 NDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPAT 254
Query: 263 LIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFV 322
L+VMLSWVSFWI+ A ARV +S+PR+SY+KA+DIYL + FV
Sbjct: 255 LMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFV 314
Query: 323 FVFAALLEYAAVNY 336
FVF ++LEYAAVNY
Sbjct: 315 FVFLSVLEYAAVNY 328
>UNIPROTKB|F1ND90 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008059 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01672 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GeneTree:ENSGT00630000089571 OMA:GFRIFQN EMBL:AADN02002377
IPI:IPI00593556 Ensembl:ENSGALT00000025443 Uniprot:F1ND90
Length = 436
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 137/291 (47%), Positives = 187/291 (64%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF- 108
QLL +D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F
Sbjct: 29 QLLRVDDHDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFP 88
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S+ + +T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y MR T T
Sbjct: 89 STTNNSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTA 148
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
C MD +PLD+Q C++E+ESY YT D+++YWK ++ E+ L QF I T
Sbjct: 149 MCNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKNGNESLKTDEKISLSQFLIQKFHTT 208
Query: 227 DRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAX 285
R + TG Y RL +SF L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+
Sbjct: 209 SRLAFYSSTGWYNRLYISFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSL 268
Query: 286 XXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY
Sbjct: 269 GITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNY 319
>UNIPROTKB|P24046 [details] [associations]
symbol:GABRR1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008058
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671 PROSITE:PS00236
GO:GO:0005887 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00466
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 EMBL:M62400
EMBL:AK296124 EMBL:AL353659 EMBL:AL353135 EMBL:BC130344
IPI:IPI00747264 IPI:IPI00921480 PIR:A38627 RefSeq:NP_001243632.1
RefSeq:NP_002033.2 UniGene:Hs.99927 ProteinModelPortal:P24046
SMR:P24046 IntAct:P24046 STRING:P24046 PhosphoSite:P24046
DMDM:223590210 PRIDE:P24046 DNASU:2569 Ensembl:ENST00000435811
Ensembl:ENST00000454853 GeneID:2569 KEGG:hsa:2569 UCSC:uc003pna.2
UCSC:uc011dzv.1 CTD:2569 GeneCards:GC06M089944 HGNC:HGNC:4090
MIM:137161 neXtProt:NX_P24046 PharmGKB:PA28505 InParanoid:P24046
KO:K05190 OMA:RMMVQLA OrthoDB:EOG4RJG1G BindingDB:P24046
ChEMBL:CHEMBL3561 GenomeRNAi:2569 NextBio:10161 ArrayExpress:P24046
Bgee:P24046 CleanEx:HS_GABRR1 Genevestigator:P24046
GermOnline:ENSG00000146276 Uniprot:P24046
Length = 479
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 141/314 (44%), Positives = 195/314 (62%)
Query: 34 HKK-SATTERLANVTQT----ISQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISE 86
HK+ S R ++T++ QLL +D +RP FGG + VG+D+ + S DSISE
Sbjct: 54 HKQVSPILRRSPDITKSPLTKSEQLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISE 113
Query: 87 VSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVTE 145
V MD+T+T+YL YWKD+RL+F S + + +T G +KIWVPD FF + K SF+HD T
Sbjct: 114 VDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTT 173
Query: 146 RNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE- 204
N ++R+ DG + Y +R T T C MD +PLD Q C++EIESY YT D+++YWK+
Sbjct: 174 DNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKG 233
Query: 205 -TPVRGVEEAQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSI 262
++ E L QF I H T +TG Y RL ++F L+R+I +F+ QTY P+
Sbjct: 234 NDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPAT 293
Query: 263 LIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFV 322
L+VMLSWVSFWI+ A ARV +S+PR+SY+KA+DIYL + FV
Sbjct: 294 LMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFV 353
Query: 323 FVFAALLEYAAVNY 336
FVF ++LEYAAVNY
Sbjct: 354 FVFLSVLEYAAVNY 367
>ZFIN|ZDB-GENE-060825-164 [details] [associations]
symbol:gabrr2a "gamma-aminobutyric acid (GABA) A
receptor, rho 2a" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
ZFIN:ZDB-GENE-060825-164 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571 EMBL:CR759878
IPI:IPI00920044 ProteinModelPortal:F1QX34
Ensembl:ENSDART00000130881 Bgee:F1QX34 Uniprot:F1QX34
Length = 475
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 134/284 (47%), Positives = 186/284 (65%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVL 115
+D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F SS ++ +
Sbjct: 69 HDFTMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFTSSTNKSM 128
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T AC MD
Sbjct: 129 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTENIMLRVFPDGHVLYSLRVTVTAACNMDFS 188
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
+PLD+Q C++E+ESY YT D+++YWK + + E+ L QF I T R +
Sbjct: 189 RFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLSIDEKISLSQFLIQKFHTTSRLAFYS 248
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXX 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+
Sbjct: 249 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 308
Query: 293 XXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY
Sbjct: 309 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNY 352
>UNIPROTKB|E1BCQ5 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 OMA:RMMVQLA EMBL:DAAA02026450
IPI:IPI00714608 Ensembl:ENSBTAT00000015496 Uniprot:E1BCQ5
Length = 422
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 136/291 (46%), Positives = 185/291 (63%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
QLL +D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F
Sbjct: 20 QLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFP 79
Query: 110 SEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S + + +T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T
Sbjct: 80 STNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTA 139
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HET 225
C MD +PLD Q C++EIESY YT D+++YWK+ ++ E L QF I H T
Sbjct: 140 MCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTT 199
Query: 226 NDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAX 285
+TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV
Sbjct: 200 TKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPL 259
Query: 286 XXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY
Sbjct: 260 GITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNY 310
>UNIPROTKB|F1S0D1 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 OMA:RMMVQLA EMBL:CU075926
Ensembl:ENSSSCT00000004771 Uniprot:F1S0D1
Length = 422
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 136/291 (46%), Positives = 185/291 (63%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
QLL +D +RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F
Sbjct: 20 QLLRIDDHDFSMRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFP 79
Query: 110 SEDEV-LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S + + +T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T
Sbjct: 80 STNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTA 139
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HET 225
C MD +PLD Q C++EIESY YT D+++YWK+ ++ E L QF I H T
Sbjct: 140 MCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTT 199
Query: 226 NDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAX 285
+TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV
Sbjct: 200 TKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPL 259
Query: 286 XXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY
Sbjct: 260 GITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNY 310
>ZFIN|ZDB-GENE-040724-212 [details] [associations]
symbol:gabrr1 "gamma-aminobutyric acid (GABA)
receptor, rho 1" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 ZFIN:ZDB-GENE-040724-212 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571 CTD:2569
OrthoDB:EOG4RJG1G EMBL:BX537249 EMBL:BX248418 IPI:IPI00509581
RefSeq:NP_001020724.1 UniGene:Dr.92000 SMR:Q5TZ16
Ensembl:ENSDART00000012376 GeneID:568984 KEGG:dre:568984
eggNOG:NOG244283 InParanoid:Q5TZ16 OMA:ENIMLRI NextBio:20889441
Uniprot:Q5TZ16
Length = 466
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 136/298 (45%), Positives = 192/298 (64%)
Query: 44 ANVTQTISQL-LHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWK 102
A VT++ L L +D +RP FGG + VG+D+ + S D+ISEV MD+T+T+YL YWK
Sbjct: 55 APVTKSEQLLKLDDHDFTMRPGFGGPAIPVGVDVQLESLDTISEVDMDFTMTLYLRHYWK 114
Query: 103 DDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYG 161
D RL+F S+ ++ +T G +KIWVPD FF + K SF+HD T N ++R++ DG + Y
Sbjct: 115 DARLSFPSNTNQSMTFDGRLVKKIWVPDIFFVHSKRSFIHDTTTENVMLRVHPDGKVLYS 174
Query: 162 MRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFT 219
+R T T C MDL ++PLD Q C++EIESY YT D+++YWK ++ ++ L QF
Sbjct: 175 LRVTVTSMCNMDLSHFPLDTQTCSLEIESYAYTDDDLMLYWKRGNKSLQTDDKISLSQFL 234
Query: 220 ILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEA 278
I H T +TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A
Sbjct: 235 IQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRA 294
Query: 279 TSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
ARV +S+PR+SY+KA+DIYL + FVFVF +++EYAAVNY
Sbjct: 295 VPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNY 352
>ZFIN|ZDB-GENE-041014-174 [details] [associations]
symbol:gabrr2b "gamma-aminobutyric acid (GABA) A
receptor, rho 2b" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 ZFIN:ZDB-GENE-041014-174 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
EMBL:BX248418 IPI:IPI00497783 ProteinModelPortal:F1Q9D5
Ensembl:ENSDART00000023304 ArrayExpress:F1Q9D5 Uniprot:F1Q9D5
Length = 427
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 132/284 (46%), Positives = 184/284 (64%)
Query: 57 YDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE-DEVL 115
+D +RP F G + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S+ ++ +
Sbjct: 27 HDFTMRPAFAGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSKHNKSM 86
Query: 116 TLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLH 175
T G +KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T AC MD
Sbjct: 87 TFDGRLVKKIWVPDVFFVHSKRSFIHDTTTENIMIRVYPDGHVLYSLRVTVTSACNMDFS 146
Query: 176 YYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA 233
+PLD Q CT+E+ESY YT D+++YWK + + ++ L QF I T R +
Sbjct: 147 RFPLDTQTCTLELESYAYTDEDLMLYWKSGDESLSTDDKISLSQFLIQKFHTTSRLAFYS 206
Query: 234 -TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXX 292
TG Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+
Sbjct: 207 STGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLT 266
Query: 293 XXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY
Sbjct: 267 MSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNY 310
>UNIPROTKB|G5E5K0 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008129 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675
PROSITE:PS00236 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0016934
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:2742
KO:K05194 OMA:TTLFAFF EMBL:DAAA02074899 EMBL:DAAA02074900
RefSeq:NP_001179843.1 UniGene:Bt.74452 ProteinModelPortal:G5E5K0
Ensembl:ENSBTAT00000022869 GeneID:537660 KEGG:bta:537660
NextBio:20877182 Uniprot:G5E5K0
Length = 452
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 132/284 (46%), Positives = 185/284 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTILGH-ETNDRKEKL 232
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + E +
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHY 236
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXX 292
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 293 XXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>UNIPROTKB|E2QZJ3 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0016594 GO:GO:0022824
Ensembl:ENSCAFT00000018822 Uniprot:E2QZJ3
Length = 374
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 131/284 (46%), Positives = 185/284 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTILGH-ETNDRKEKL 232
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + E +
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHY 236
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXX 292
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 293 XXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>UNIPROTKB|F6Y3F7 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 CTD:2742 KO:K05194 OMA:TTLFAFF
Ensembl:ENSCAFT00000018822 EMBL:AAEX03026154 RefSeq:XP_003435502.1
RefSeq:XP_548866.2 ProteinModelPortal:F6Y3F7 GeneID:491746
KEGG:cfa:491746 Uniprot:F6Y3F7
Length = 452
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 131/284 (46%), Positives = 185/284 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTILGH-ETNDRKEKL 232
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + E +
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHY 236
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXX 292
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 293 XXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>UNIPROTKB|P23416 [details] [associations]
symbol:GLRA2 "Glycine receptor subunit alpha-2"
species:9606 "Homo sapiens" [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=NAS] [GO:0006811 "ion transport"
evidence=IDA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IDA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IDA] [GO:0016594 "glycine binding"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
EMBL:U77731 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 EMBL:CH471074
GO:GO:0007416 GO:GO:0016934 DrugBank:DB00145 GO:GO:0034707
DrugBank:DB00898 HOVERGEN:HBG051707 eggNOG:NOG265706
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0022824 TCDB:1.A.9.3.1
EMBL:X52008 EMBL:AF053495 EMBL:AF053487 EMBL:AF053488 EMBL:AF053489
EMBL:AF053490 EMBL:AF053491 EMBL:AF053492 EMBL:AF053493
EMBL:AF053494 EMBL:AY437083 EMBL:AY437084 EMBL:CR450343
EMBL:AK289561 EMBL:AK297304 EMBL:AK312591 EMBL:AC003658
EMBL:AC003683 EMBL:BC032864 EMBL:U77724 EMBL:U77725 EMBL:U77726
EMBL:U77727 EMBL:U77728 EMBL:U77729 EMBL:U77730 IPI:IPI00011566
IPI:IPI00220450 PIR:S12381 RefSeq:NP_001112357.1
RefSeq:NP_001112358.1 RefSeq:NP_001165413.1 RefSeq:NP_002054.1
UniGene:Hs.2700 ProteinModelPortal:P23416 SMR:P23416 IntAct:P23416
MINT:MINT-1412636 STRING:P23416 PhosphoSite:P23416 DMDM:121578
PRIDE:P23416 DNASU:2742 Ensembl:ENST00000218075
Ensembl:ENST00000355020 Ensembl:ENST00000443437 GeneID:2742
KEGG:hsa:2742 UCSC:uc004cwe.4 UCSC:uc010nep.3 CTD:2742
GeneCards:GC0XP014457 H-InvDB:HIX0016955 HGNC:HGNC:4327 MIM:305990
neXtProt:NX_P23416 PharmGKB:PA28728 InParanoid:P23416 KO:K05194
OMA:TTLFAFF OrthoDB:EOG4WWRJJ PhylomeDB:P23416 BindingDB:P23416
ChEMBL:CHEMBL5871 ChiTaRS:GLRA2 GenomeRNAi:2742 NextBio:10808
ArrayExpress:P23416 Bgee:P23416 CleanEx:HS_GLRA2
Genevestigator:P23416 GermOnline:ENSG00000101958 Uniprot:P23416
Length = 452
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 131/284 (46%), Positives = 185/284 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTILGH-ETNDRKEKL 232
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + E +
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHY 236
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXX 292
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 293 XXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>MGI|MGI:95748 [details] [associations]
symbol:Glra2 "glycine receptor, alpha 2 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=ISO] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=ISO] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
MGI:MGI:95748 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416
GO:GO:0016934 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:BC056342
EMBL:BC068987 IPI:IPI00270265 RefSeq:NP_906272.1 UniGene:Mm.113877
ProteinModelPortal:Q7TNC8 SMR:Q7TNC8 STRING:Q7TNC8
PhosphoSite:Q7TNC8 PRIDE:Q7TNC8 Ensembl:ENSMUST00000058787
GeneID:237213 KEGG:mmu:237213 InParanoid:Q7TNC8 NextBio:383251
Bgee:Q7TNC8 CleanEx:MM_GLRA2 Genevestigator:Q7TNC8
GermOnline:ENSMUSG00000018589 Uniprot:Q7TNC8
Length = 452
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 131/284 (46%), Positives = 185/284 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTILGH-ETNDRKEKL 232
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + E +
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHY 236
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXX 292
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 293 XXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>UNIPROTKB|E1BTB5 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218
GO:GO:0016934 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OMA:TTLFAFF EMBL:AADN02011338
EMBL:AADN02011339 EMBL:AADN02011340 EMBL:AADN02011341
IPI:IPI00575771 RefSeq:XP_003640566.1 Ensembl:ENSGALT00000026747
GeneID:772019 KEGG:gga:772019 Uniprot:E1BTB5
Length = 452
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 132/284 (46%), Positives = 184/284 (64%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTIL-GHETNDRKEKL 232
+P+D Q CT+++ES+GYT+ D++ W + PV+ E LPQF + E +
Sbjct: 177 KNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEDKELGYCTKHY 236
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXX 292
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 293 XXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>UNIPROTKB|B7ZBQ7 [details] [associations]
symbol:GABRR1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 EMBL:AL353659 EMBL:AL353135
UniGene:Hs.99927 GeneID:2569 KEGG:hsa:2569 CTD:2569 HGNC:HGNC:4090
KO:K05190 GenomeRNAi:2569 GO:GO:0016917 IPI:IPI00940134
RefSeq:NP_001243633.1 RefSeq:NP_001254511.1 SMR:B7ZBQ7
STRING:B7ZBQ7 Ensembl:ENST00000369451 Uniprot:B7ZBQ7
Length = 392
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 132/280 (47%), Positives = 180/280 (64%)
Query: 61 LRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEV-LTLSG 119
+RP FGG + VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S + + +T G
Sbjct: 1 MRPGFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTFDG 60
Query: 120 DFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPL 179
+KIWVPD FF + K SF+HD T N ++R+ DG + Y +R T T C MD +PL
Sbjct: 61 RLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAMCNMDFSRFPL 120
Query: 180 DNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG-HETNDRKEKLATGT 236
D Q C++EIESY YT D+++YWK+ ++ E L QF I H T +TG
Sbjct: 121 DTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTTKLAFYSSTGW 180
Query: 237 YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXX 296
Y RL ++F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV
Sbjct: 181 YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI 240
Query: 297 XXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY
Sbjct: 241 ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNY 280
>UNIPROTKB|F1NY45 [details] [associations]
symbol:GABRP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
OMA:ISESDMD EMBL:AADN02035937 IPI:IPI00582090
Ensembl:ENSGALT00000003373 Uniprot:F1NY45
Length = 444
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 134/288 (46%), Positives = 181/288 (62%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L GY+ LRP FGG+P+ + M L IAS SISE MDYT T+YL Q W D RL F +
Sbjct: 42 LTMGYNKYLRPYFGGEPVQIAMSLDIASISSISESDMDYTATIYLRQRWTDPRLVFHG-N 100
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ TL E +WVPDT+ K SFLHDVT N+L+RL +G+I Y +R TTT+AC M
Sbjct: 101 KSFTLDARLVELLWVPDTYIVESKRSFLHDVTVGNRLIRLFSNGTILYALRITTTVACNM 160
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY DV+ W V G+E+ +L Q+T+ + T K
Sbjct: 161 DLSKYPMDTQTCRLQLESWGYDENDVIFTWLRGNDSVHGIEKLRLSQYTVERYYTLISKS 220
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXX 290
+ TG+Y RL L F+L+RN+ YF+ +TY+PS L+VMLSWVSFWI ++ AR
Sbjct: 221 QQETGSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTV 280
Query: 291 XXXXXXXXXXRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
RSSL + + ++KAID+YL +CF F+F AL+EYA +YS
Sbjct: 281 LSMTTLMIGSRSSLSKTNCFIKAIDVYLGICFTFIFGALVEYAVAHYS 328
>UNIPROTKB|Q5EA06 [details] [associations]
symbol:GABRP "Gamma-aminobutyric acid receptor subunit pi"
species:9913 "Bos taurus" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 HSSP:P23415
GeneTree:ENSGT00630000089571 EMBL:BT020763 IPI:IPI00707024
RefSeq:NP_001015618.1 UniGene:Bt.25960 ProteinModelPortal:Q5EA06
Ensembl:ENSBTAT00000003604 GeneID:517459 KEGG:bta:517459 CTD:2568
eggNOG:NOG255582 InParanoid:Q5EA06 KO:K05189 OMA:ISESDMD
OrthoDB:EOG4N04F2 NextBio:20872445 Uniprot:Q5EA06
Length = 440
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 133/288 (46%), Positives = 182/288 (63%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L GY+ LRPNFGG+P+ + + L +AS SISE +MDYT T+YL Q W D RL F +
Sbjct: 44 LTAGYNKFLRPNFGGEPVQIALTLDVASISSISESNMDYTATIYLRQRWTDQRLVFEG-N 102
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC M
Sbjct: 103 KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNM 162
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T+ +
Sbjct: 163 DLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQQYFTSVTRS 222
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXX 290
+ TG Y RL L F+LQRN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR
Sbjct: 223 QQETGNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTV 282
Query: 291 XXXXXXXXXXRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
R+SLP + ++KAID+YL +CF FVF ALLEYA +YS
Sbjct: 283 LSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYS 330
>UNIPROTKB|F1RRX8 [details] [associations]
symbol:GABRP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
KO:K05189 OMA:ISESDMD EMBL:CU856091 RefSeq:XP_003134108.1
Ensembl:ENSSSCT00000026800 GeneID:100525792 KEGG:ssc:100525792
Uniprot:F1RRX8
Length = 440
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 136/307 (44%), Positives = 190/307 (61%)
Query: 34 HKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTI 93
H +++ +++L+ L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT
Sbjct: 27 HVEASRSDKLS--LPGFENLTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTA 84
Query: 94 TMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
T+YL Q W D RL F ++ TL E +WVPDT+ K SFLH+VT N+L+RL
Sbjct: 85 TIYLRQRWTDQRLVFEG-NKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLF 143
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVE 211
+G++ Y +R TTT+AC MDL YP+D Q C +++ES+GY DV W VRG+E
Sbjct: 144 SNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLE 203
Query: 212 EAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVS 271
+L Q+TI + T + + TG Y RL L F+LQRN+ YF+ +TY+PS +V+LSWVS
Sbjct: 204 NLRLAQYTIQQYFTLVTRSQQETGNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVS 263
Query: 272 FWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRIS-YVKAIDIYLVMCFVFVFAALLE 330
FWI+ ++ AR R+SLP + ++KAID+YL +CF FVF ALLE
Sbjct: 264 FWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLE 323
Query: 331 YAAVNYS 337
YA +YS
Sbjct: 324 YAVAHYS 330
>ZFIN|ZDB-GENE-080722-20 [details] [associations]
symbol:zgc:194845 "zgc:194845" species:7955 "Danio
rerio" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 ZFIN:ZDB-GENE-080722-20
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG77438 HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571
KO:K05190 OrthoDB:EOG41G343 EMBL:CR376845 EMBL:CR925774
EMBL:BC163099 EMBL:BC163103 IPI:IPI00502511 RefSeq:NP_001122232.1
UniGene:Dr.116763 Ensembl:ENSDART00000048430 GeneID:570876
KEGG:dre:570876 OMA:YLRHYWQ NextBio:20890333 Uniprot:B3DIE5
Length = 472
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 135/305 (44%), Positives = 193/305 (63%)
Query: 35 KKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTIT 94
KKS +T+ L ++ + ++ +D +RP FGG + VG+D+ + S D ISEV+MD+T+T
Sbjct: 55 KKSDSTKSLLIKSEQLLRI-EDHDFAMRPGFGGSAIPVGIDVQVESIDGISEVNMDFTMT 113
Query: 95 MYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
+YL YW+DDRLAF SS ++ T +KIWVPD FF + K SF+HD T N ++R+
Sbjct: 114 LYLRHYWQDDRLAFPSSNNKSRTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVF 173
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TPVRGVEE 212
DG+I Y +R T T C MD +PLD QNC++E+ESY Y D+++YWK +E
Sbjct: 174 PDGNILYSVRITVTALCSMDFSRFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRTDE 233
Query: 213 AQLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVS 271
L QF I H + +TG Y RL ++F L+R+I +F+ QTY P++L+VMLSWVS
Sbjct: 234 IALSQFFIEEFHPSYGLAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVMLSWVS 293
Query: 272 FWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEY 331
FWI+ A ARV+ +S+P++SYVKA+DIYL F+FVF +++EY
Sbjct: 294 FWIDRRAVPARVSLGITTVLTMSTIITGVSASMPQVSYVKAVDIYLWASFLFVFLSVIEY 353
Query: 332 AAVNY 336
AAVNY
Sbjct: 354 AAVNY 358
>ZFIN|ZDB-GENE-020402-1 [details] [associations]
symbol:glra3 "glycine receptor, alpha 3" species:7955
"Danio rerio" [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
ZFIN:ZDB-GENE-020402-1 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 HSSP:P23415
KO:K05195 GO:GO:0016594 GO:GO:0022824 CTD:8001 EMBL:AJ308516
IPI:IPI00500173 RefSeq:NP_694497.1 UniGene:Dr.12384
ProteinModelPortal:Q90W14 SMR:Q90W14 GeneID:192124 KEGG:dre:192124
NextBio:20797134 Uniprot:Q90W14
Length = 450
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 132/285 (46%), Positives = 189/285 (66%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E PV+ + LPQF IL E++ R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGPVQVADGLTLPQF-ILKDESDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>UNIPROTKB|E2R7P3 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 KO:K05195
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:8001
OMA:PKNSDEM EMBL:AAEX03014316 RefSeq:XP_543200.2
ProteinModelPortal:E2R7P3 Ensembl:ENSCAFT00000012633 GeneID:486074
KEGG:cfa:486074 NextBio:20859920 Uniprot:E2R7P3
Length = 464
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 132/285 (46%), Positives = 188/285 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>UNIPROTKB|F1Q2X8 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 EMBL:AAEX03014316
Ensembl:ENSCAFT00000012641 Ensembl:ENSCAFT00000043558
Uniprot:F1Q2X8
Length = 409
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 132/285 (46%), Positives = 188/285 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 16 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 75
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 76 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 135
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 136 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 194
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA
Sbjct: 195 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 254
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 255 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 299
>UNIPROTKB|J9P291 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 KO:K05195
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:8001
EMBL:AAEX03014316 GeneID:486074 KEGG:cfa:486074
RefSeq:XP_003433410.1 Ensembl:ENSCAFT00000049653 Uniprot:J9P291
Length = 449
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 132/285 (46%), Positives = 188/285 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>UNIPROTKB|O75311 [details] [associations]
symbol:GLRA3 "Glycine receptor subunit alpha-3"
species:9606 "Homo sapiens" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0007268 "synaptic transmission" evidence=NAS]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
EMBL:AF017724 GO:GO:0016021 GO:GO:0005886 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 EMBL:CH471056
DrugBank:DB00145 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
KO:K05195 HOGENOM:HOG000231336 OrthoDB:EOG4TF0KF GO:GO:0016594
GO:GO:0022824 TCDB:1.A.9.3.1 EMBL:AF017715 EMBL:AF017716
EMBL:AF017717 EMBL:AF017718 EMBL:AF017719 EMBL:AF017720
EMBL:AF017721 EMBL:AF017722 EMBL:AF017723 EMBL:U93917 EMBL:BC036086
IPI:IPI00025243 IPI:IPI00216193 RefSeq:NP_001036008.1
RefSeq:NP_006520.2 UniGene:Hs.413099 ProteinModelPortal:O75311
SMR:O75311 STRING:O75311 PhosphoSite:O75311 PRIDE:O75311 DNASU:8001
Ensembl:ENST00000274093 Ensembl:ENST00000340217 GeneID:8001
KEGG:hsa:8001 UCSC:uc003ity.1 UCSC:uc003itz.1 CTD:8001
GeneCards:GC04M175558 HGNC:HGNC:4328 HPA:HPA014805 MIM:600421
neXtProt:NX_O75311 PharmGKB:PA28729 InParanoid:O75311 OMA:PKNSDEM
PhylomeDB:O75311 BindingDB:O75311 ChEMBL:CHEMBL1075092
GenomeRNAi:8001 NextBio:30552 ArrayExpress:O75311 Bgee:O75311
CleanEx:HS_GLRA3 Genevestigator:O75311 GermOnline:ENSG00000145451
Uniprot:O75311
Length = 464
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 132/285 (46%), Positives = 188/285 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>MGI|MGI:95749 [details] [associations]
symbol:Glra3 "glycine receptor, alpha 3 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
MGI:MGI:95749 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0034707
HOVERGEN:HBG051707 eggNOG:NOG265706 KO:K05195 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 CTD:8001
EMBL:AF362764 EMBL:AY230204 IPI:IPI00380761 RefSeq:NP_536686.2
UniGene:Mm.307061 ProteinModelPortal:Q91XP5 SMR:Q91XP5
STRING:Q91XP5 PhosphoSite:Q91XP5 PaxDb:Q91XP5 PRIDE:Q91XP5
DNASU:110304 GeneID:110304 KEGG:mmu:110304 UCSC:uc009ujb.2
InParanoid:Q91XP5 NextBio:363729 Bgee:Q91XP5 CleanEx:MM_GLRA3
Genevestigator:Q91XP5 GermOnline:ENSMUSG00000038257 Uniprot:Q91XP5
Length = 464
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 132/285 (46%), Positives = 188/285 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>RGD|2705 [details] [associations]
symbol:Glra2 "glycine receptor, alpha 2" species:10116 "Rattus
norvegicus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0006811 "ion transport" evidence=ISO] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA;ISO] [GO:0007416 "synapse assembly"
evidence=IEP] [GO:0016594 "glycine binding" evidence=IEA;ISO]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA;ISO;TAS] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673
PRINTS:PR01675 PROSITE:PS00236 RGD:2705 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416
GO:GO:0016934 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:X57281
EMBL:X61159 EMBL:AJ310837 IPI:IPI00210383 IPI:IPI00231543 PIR:S14816
PIR:S18836 RefSeq:NP_036700.1 RefSeq:XP_003752087.1 UniGene:Rn.10379
ProteinModelPortal:P22771 SMR:P22771 STRING:P22771
Ensembl:ENSRNOT00000004443 GeneID:100910572 GeneID:24397
KEGG:rno:100910572 KEGG:rno:24397 UCSC:RGD:2705 InParanoid:P22771
BindingDB:P22771 ChEMBL:CHEMBL2328 NextBio:603187 ArrayExpress:P22771
Genevestigator:P22771 GermOnline:ENSRNOG00000003313 Uniprot:P22771
Length = 452
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 130/284 (45%), Positives = 184/284 (64%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTILGH-ETNDRKEKL 232
+P+D Q CT+++ES+ YT+ D++ W + PV+ E LPQF + E +
Sbjct: 177 KNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHY 236
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXX 292
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 293 XXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>RGD|621229 [details] [associations]
symbol:Glra3 "glycine receptor, alpha 3" species:10116 "Rattus
norvegicus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IDA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008130 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676
PROSITE:PS00236 RGD:621229 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0034707
HOVERGEN:HBG051707 eggNOG:NOG265706 GO:GO:0016594 GO:GO:0022824
EMBL:M55250 IPI:IPI00392219 PIR:A23682 UniGene:Rn.10038
ProteinModelPortal:P24524 SMR:P24524 BindingDB:P24524
ChEMBL:CHEMBL2677 Genevestigator:P24524 Uniprot:P24524
Length = 464
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 132/285 (46%), Positives = 188/285 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T TL+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+ E PV+ E LPQF +L E + R +
Sbjct: 176 KNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQF-LLKEEKDLRYCTKH 234
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA
Sbjct: 235 YNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVL 294
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 295 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 339
>UNIPROTKB|P22771 [details] [associations]
symbol:Glra2 "Glycine receptor subunit alpha-2"
species:10116 "Rattus norvegicus" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236 RGD:2705
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416 GO:GO:0016934
GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:X57281
EMBL:X61159 EMBL:AJ310837 IPI:IPI00210383 IPI:IPI00231543
PIR:S14816 PIR:S18836 RefSeq:NP_036700.1 RefSeq:XP_003752087.1
UniGene:Rn.10379 ProteinModelPortal:P22771 SMR:P22771 STRING:P22771
Ensembl:ENSRNOT00000004443 GeneID:100910572 GeneID:24397
KEGG:rno:100910572 KEGG:rno:24397 UCSC:RGD:2705 InParanoid:P22771
BindingDB:P22771 ChEMBL:CHEMBL2328 NextBio:603187
ArrayExpress:P22771 Genevestigator:P22771
GermOnline:ENSRNOG00000003313 Uniprot:P22771
Length = 452
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 130/284 (45%), Positives = 184/284 (64%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTILGH-ETNDRKEKL 232
+P+D Q CT+++ES+ YT+ D++ W + PV+ E LPQF + E +
Sbjct: 177 KNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHY 236
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXX 292
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLT 296
Query: 293 XXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>UNIPROTKB|E5RI57 [details] [associations]
symbol:GABRP "Gamma-aminobutyric acid receptor subunit pi"
species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4089 EMBL:AC008514
IPI:IPI00980228 ProteinModelPortal:E5RI57 SMR:E5RI57
Ensembl:ENST00000519598 ArrayExpress:E5RI57 Bgee:E5RI57
Uniprot:E5RI57
Length = 349
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 133/288 (46%), Positives = 181/288 (62%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F +
Sbjct: 44 LTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWMDQRLVFEG-N 102
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC M
Sbjct: 103 KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNM 162
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T +
Sbjct: 163 DLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGNDSVRGLEHLRLAQYTIERYFTLVTRS 222
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXX 290
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR
Sbjct: 223 QQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTV 282
Query: 291 XXXXXXXXXXRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
R+SLP + ++KAID+YL +CF FVF ALLEYA +YS
Sbjct: 283 LSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYS 330
>UNIPROTKB|O00591 [details] [associations]
symbol:GABRP "Gamma-aminobutyric acid receptor subunit pi"
species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0005886
EMBL:CH471062 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2568 eggNOG:NOG255582
KO:K05189 OMA:ISESDMD OrthoDB:EOG4N04F2 EMBL:U95367 EMBL:AF009702
EMBL:AF009694 EMBL:AF009695 EMBL:AF009696 EMBL:AF009697
EMBL:AF009698 EMBL:AF009699 EMBL:AF009700 EMBL:AF009701
EMBL:AK292901 EMBL:BC074810 EMBL:BC074865 EMBL:BC109105
EMBL:BC109106 IPI:IPI00012181 RefSeq:NP_055026.1 UniGene:Hs.26225
ProteinModelPortal:O00591 SMR:O00591 STRING:O00591
PhosphoSite:O00591 PaxDb:O00591 PRIDE:O00591
Ensembl:ENST00000265294 Ensembl:ENST00000518525 GeneID:2568
KEGG:hsa:2568 UCSC:uc003mau.3 GeneCards:GC05P170143 HGNC:HGNC:4089
HPA:CAB014883 MIM:602729 neXtProt:NX_O00591 PharmGKB:PA28503
InParanoid:O00591 PhylomeDB:O00591 BindingDB:O00591
ChEMBL:CHEMBL3506 GenomeRNAi:2568 NextBio:10157 ArrayExpress:O00591
Bgee:O00591 CleanEx:HS_GABRP Genevestigator:O00591
GermOnline:ENSG00000094755 Uniprot:O00591
Length = 440
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 133/288 (46%), Positives = 181/288 (62%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F +
Sbjct: 44 LTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWMDQRLVFEG-N 102
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC M
Sbjct: 103 KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNM 162
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T +
Sbjct: 163 DLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGNDSVRGLEHLRLAQYTIERYFTLVTRS 222
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXX 290
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR
Sbjct: 223 QQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTV 282
Query: 291 XXXXXXXXXXRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
R+SLP + ++KAID+YL +CF FVF ALLEYA +YS
Sbjct: 283 LSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYS 330
>UNIPROTKB|F1MBQ3 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008057 InterPro:IPR008059 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
IPI:IPI00694785 EMBL:DAAA02026443 Ensembl:ENSBTAT00000024526
Uniprot:F1MBQ3
Length = 392
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 129/274 (47%), Positives = 180/274 (65%)
Query: 67 GDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKI 125
G + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF S+ ++ +T G +KI
Sbjct: 1 GPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSASNKSMTFDGRLVKKI 60
Query: 126 WVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCT 185
WVPD FF + K SF+HD T N ++R+ DG + Y MR T T C MD ++PLD+Q C+
Sbjct: 61 WVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCS 120
Query: 186 VEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA-TGTYQRLSL 242
+E+ESY YT D+++YWK + ++ E+ L QF I T R + TG Y RL +
Sbjct: 121 LELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYI 180
Query: 243 SFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRS 302
+F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+ +
Sbjct: 181 NFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNA 240
Query: 303 SLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY
Sbjct: 241 SMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNY 274
>UNIPROTKB|G5E635 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0007601 "visual perception"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GeneTree:ENSGT00630000089571 OMA:GFRIFQN EMBL:DAAA02026443
Ensembl:ENSBTAT00000050515 Uniprot:G5E635
Length = 412
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 129/274 (47%), Positives = 180/274 (65%)
Query: 67 GDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKI 125
G + VG+D+ + S DSISEV MD+T+T+YL YWKD+RLAF S+ ++ +T G +KI
Sbjct: 1 GPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSASNKSMTFDGRLVKKI 60
Query: 126 WVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCT 185
WVPD FF + K SF+HD T N ++R+ DG + Y MR T T C MD ++PLD+Q C+
Sbjct: 61 WVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAMCNMDFSHFPLDSQTCS 120
Query: 186 VEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDRKEKLA-TGTYQRLSL 242
+E+ESY YT D+++YWK + ++ E+ L QF I T R + TG Y RL +
Sbjct: 121 LELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYI 180
Query: 243 SFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRS 302
+F L+R+I +F+ QTY P+ L+VMLSWVSFWI+ A ARV+ +
Sbjct: 181 NFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNA 240
Query: 303 SLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
S+PR+SY+KA+DIYL + FVFVF ++LEYAAVNY
Sbjct: 241 SMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNY 274
>UNIPROTKB|E2RS87 [details] [associations]
symbol:GABRP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
CTD:2568 KO:K05189 OMA:ISESDMD EMBL:AAEX03003017 RefSeq:XP_546242.3
ProteinModelPortal:E2RS87 Ensembl:ENSCAFT00000026815 GeneID:489124
KEGG:cfa:489124 NextBio:20862340 Uniprot:E2RS87
Length = 440
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 132/288 (45%), Positives = 181/288 (62%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L GY+ LRPNFGG+P+ + + + IAS SISE +MDYT T+YL Q W D RL F +
Sbjct: 44 LTAGYNKFLRPNFGGEPVQIALTMDIASISSISESNMDYTATIYLRQRWTDQRLVFEG-N 102
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC M
Sbjct: 103 KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNM 162
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T +
Sbjct: 163 DLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQRYFTLVTRS 222
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXX 290
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR
Sbjct: 223 QQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTV 282
Query: 291 XXXXXXXXXXRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
R+SLP + ++KAID+YL +CF FVF ALLEYA +YS
Sbjct: 283 LSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYS 330
>UNIPROTKB|F1RQB7 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000344 "positive regulation of acrosome reaction"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:0060013 "righting reflex"
evidence=IEA] [GO:0060012 "synaptic transmission, glycinergic"
evidence=IEA] [GO:0051970 "negative regulation of transmission of
nerve impulse" evidence=IEA] [GO:0050884 "neuromuscular process
controlling posture" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0030977 "taurine binding"
evidence=IEA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007340 "acrosome
reaction" evidence=IEA] [GO:0007218 "neuropeptide signaling
pathway" evidence=IEA] [GO:0006936 "muscle contraction"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0001964
"startle response" evidence=IEA] [GO:0001508 "regulation of action
potential" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008128
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
GO:GO:0043231 GO:GO:0005887 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0007628
GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
GeneTree:ENSGT00550000074453 OMA:NTANPVP GO:GO:0016594
GO:GO:0030977 GO:GO:0022824 GO:GO:0051970 GO:GO:0060012
EMBL:CU570659 EMBL:CU463090 Ensembl:ENSSSCT00000018594
Uniprot:F1RQB7
Length = 443
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 136/318 (42%), Positives = 196/318 (61%)
Query: 30 LRLCHKKSATTERLANVTQTISQLLH-------GYDIRLRPNFGGDPLYVGMDLTIASFD 82
L L K A R A+ + S L GYD R+RPNF G P+ V ++ I SF
Sbjct: 5 LSLAASKEAEAARSASKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFG 64
Query: 83 SISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLH 141
SI+E +MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H
Sbjct: 65 SIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFH 124
Query: 142 DVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMY 201
++T NKL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++
Sbjct: 125 EITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFE 184
Query: 202 WKET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTY 258
W+E V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y
Sbjct: 185 WQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMY 243
Query: 259 LPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLV 318
+PS+LIV+LSW+SFWIN +A ARV R+SLP++SYVKAIDI++
Sbjct: 244 IPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMA 303
Query: 319 MCFVFVFAALLEYAAVNY 336
+C +FVF+ALLEYAAVN+
Sbjct: 304 VCLLFVFSALLEYAAVNF 321
>RGD|620532 [details] [associations]
symbol:Gabrp "gamma-aminobutyric acid (GABA-A) receptor, pi"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 RGD:620532 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2568 eggNOG:NOG255582
KO:K05189 OrthoDB:EOG4N04F2 EMBL:U95368 IPI:IPI00192631
RefSeq:NP_112291.1 UniGene:Rn.21401 ProteinModelPortal:O09028
STRING:O09028 PRIDE:O09028 GeneID:81658 KEGG:rno:81658
UCSC:RGD:620532 InParanoid:O09028 BindingDB:O09028 ChEMBL:CHEMBL294
NextBio:615218 ArrayExpress:O09028 Genevestigator:O09028
GermOnline:ENSRNOG00000032417 Uniprot:O09028
Length = 440
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 134/288 (46%), Positives = 179/288 (62%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L GY+ LRPNFGGDP+ + + L IAS SISE +MDYT T+YL Q W D RL F +
Sbjct: 44 LTAGYNKFLRPNFGGDPVRIALTLDIASISSISESNMDYTATIYLRQRWTDPRLVFEG-N 102
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+ C M
Sbjct: 103 KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVTCNM 162
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T
Sbjct: 163 DLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQQYFTLVTVS 222
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXX 290
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ E+ AR
Sbjct: 223 QQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLESVPARTCIGVTTV 282
Query: 291 XXXXXXXXXXRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
R+SLP + ++KAID+YL +CF FVF ALLEYA +YS
Sbjct: 283 LSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYS 330
>UNIPROTKB|O09028 [details] [associations]
symbol:Gabrp "Gamma-aminobutyric acid receptor subunit pi"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 RGD:620532
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2568 eggNOG:NOG255582
KO:K05189 OrthoDB:EOG4N04F2 EMBL:U95368 IPI:IPI00192631
RefSeq:NP_112291.1 UniGene:Rn.21401 ProteinModelPortal:O09028
STRING:O09028 PRIDE:O09028 GeneID:81658 KEGG:rno:81658
UCSC:RGD:620532 InParanoid:O09028 BindingDB:O09028 ChEMBL:CHEMBL294
NextBio:615218 ArrayExpress:O09028 Genevestigator:O09028
GermOnline:ENSRNOG00000032417 Uniprot:O09028
Length = 440
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 134/288 (46%), Positives = 179/288 (62%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L GY+ LRPNFGGDP+ + + L IAS SISE +MDYT T+YL Q W D RL F +
Sbjct: 44 LTAGYNKFLRPNFGGDPVRIALTLDIASISSISESNMDYTATIYLRQRWTDPRLVFEG-N 102
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+ C M
Sbjct: 103 KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVTCNM 162
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T
Sbjct: 163 DLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQQYFTLVTVS 222
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXX 290
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ E+ AR
Sbjct: 223 QQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLESVPARTCIGVTTV 282
Query: 291 XXXXXXXXXXRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
R+SLP + ++KAID+YL +CF FVF ALLEYA +YS
Sbjct: 283 LSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYS 330
>UNIPROTKB|F1NH12 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0001508
"regulation of action potential" evidence=IEA] [GO:0001964 "startle
response" evidence=IEA] [GO:0002087 "regulation of respiratory
gaseous exchange by neurological system process" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0006936
"muscle contraction" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0030977 "taurine binding" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0051970 "negative regulation of transmission of
nerve impulse" evidence=IEA] [GO:0060012 "synaptic transmission,
glycinergic" evidence=IEA] [GO:0060013 "righting reflex"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:2000344 "positive regulation
of acrosome reaction" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0001508
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0043576
GO:GO:2000344 GeneTree:ENSGT00550000074453 OMA:NTANPVP
GO:GO:0016594 GO:GO:0030977 GO:GO:0022824 GO:GO:0051970
EMBL:AADN02028653 IPI:IPI00580687 Ensembl:ENSGALT00000034504
Uniprot:F1NH12
Length = 452
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 128/285 (44%), Positives = 186/285 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 54 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDS 113
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 114 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 173
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V+ + LPQF IL E + R +
Sbjct: 174 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVADGLTLPQF-ILKEEKDLRYCTKH 232
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV
Sbjct: 233 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 292
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 293 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 337
>UNIPROTKB|P57695 [details] [associations]
symbol:GLRA1 "Glycine receptor subunit alpha-1"
species:9913 "Bos taurus" [GO:0016594 "glycine binding"
evidence=ISS] [GO:0006936 "muscle contraction" evidence=ISS]
[GO:0006821 "chloride transport" evidence=ISS] [GO:0001964 "startle
response" evidence=ISS] [GO:0051970 "negative regulation of
transmission of nerve impulse" evidence=ISS] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISS]
[GO:0030977 "taurine binding" evidence=ISS] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISS] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISS] [GO:0006811 "ion transport" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:2000344 "positive
regulation of acrosome reaction" evidence=IEA] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=IEA] [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007340 "acrosome
reaction" evidence=IEA] [GO:0002087 "regulation of respiratory
gaseous exchange by neurological system process" evidence=IEA]
[GO:0001508 "regulation of action potential" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0034707
GO:GO:0007628 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
HOVERGEN:HBG051707 eggNOG:NOG265706 EMBL:AF268375 EMBL:AF268366
EMBL:AF268358 EMBL:AF268360 EMBL:AF268361 EMBL:AF268359
EMBL:AF268362 EMBL:AF268364 EMBL:AF268365 EMBL:AF268363
IPI:IPI00700898 IPI:IPI00807328 RefSeq:NP_776746.1 UniGene:Bt.5559
ProteinModelPortal:P57695 SMR:P57695 PRIDE:P57695
Ensembl:ENSBTAT00000019143 GeneID:281783 KEGG:bta:281783 CTD:2741
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 InParanoid:P57695
KO:K05193 OMA:NTANPVP OrthoDB:EOG4TF0KF NextBio:20805696
GO:GO:0016594 GO:GO:0030977 GO:GO:0022824 GO:GO:0051970
GO:GO:0060012 Uniprot:P57695
Length = 457
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 128/285 (44%), Positives = 186/285 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 51 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDS 110
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 111 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 170
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V+ + LPQF IL E + R +
Sbjct: 171 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKH 229
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 334
>UNIPROTKB|F1PC16 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008128
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 CTD:2741
GeneTree:ENSGT00550000074453 KO:K05193 OMA:NTANPVP GO:GO:0016594
GO:GO:0022824 EMBL:AAEX03003083 RefSeq:XP_003434572.1
Ensembl:ENSCAFT00000028284 GeneID:489172 KEGG:cfa:489172
Uniprot:F1PC16
Length = 457
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 128/285 (44%), Positives = 186/285 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 51 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDS 110
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 111 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 170
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V+ + LPQF IL E + R +
Sbjct: 171 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKH 229
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 334
>UNIPROTKB|P23415 [details] [associations]
symbol:GLRA1 "Glycine receptor subunit alpha-1"
species:9606 "Homo sapiens" [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0001508 "regulation of action potential" evidence=IEA]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0050884
"neuromuscular process controlling posture" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051291
"protein heterooligomerization" evidence=IEA] [GO:0060012 "synaptic
transmission, glycinergic" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IGI;IMP;IDA] [GO:0005887 "integral to plasma membrane"
evidence=IMP;IDA;NAS] [GO:0006811 "ion transport" evidence=IDA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IDA]
[GO:0030977 "taurine binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0001964 "startle response" evidence=IMP]
[GO:0006821 "chloride transport" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0006936 "muscle contraction" evidence=IMP] [GO:0016021
"integral to membrane" evidence=NAS] [GO:0051970 "negative
regulation of transmission of nerve impulse" evidence=IMP]
[GO:0016594 "glycine binding" evidence=IDA] [GO:2000344 "positive
regulation of acrosome reaction" evidence=IMP] [GO:0042391
"regulation of membrane potential" evidence=IMP] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_15518 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 EMBL:CH471062 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0042391 GO:GO:0001508
GO:GO:0006936 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
DrugBank:DB00145 DrugBank:DB01159 GO:GO:0034707 GO:GO:0007628
DrugBank:DB01189 DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028
DrugBank:DB01236 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
DrugBank:DB00898 HOVERGEN:HBG051707 eggNOG:NOG265706 Orphanet:3197
CTD:2741 HOGENOM:HOG000231336 KO:K05193 OMA:NTANPVP
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0030977 GO:GO:0022824
GO:GO:0051970 GO:GO:0060012 EMBL:X52009 EMBL:AK312702 EMBL:BC074980
EMBL:BC114947 IPI:IPI00011565 IPI:IPI00795343 PIR:S12382
RefSeq:NP_000162.2 RefSeq:NP_001139512.1 UniGene:Hs.121490 PDB:1MOT
PDB:1VRY PDBsum:1MOT PDBsum:1VRY ProteinModelPortal:P23415
SMR:P23415 DIP:DIP-48768N STRING:P23415 TCDB:1.A.9.3.1
PhosphoSite:P23415 DMDM:116242495 PRIDE:P23415
Ensembl:ENST00000274576 Ensembl:ENST00000455880 GeneID:2741
KEGG:hsa:2741 UCSC:uc003lur.3 UCSC:uc003lut.3 GeneCards:GC05M151182
HGNC:HGNC:4326 HPA:HPA016502 MIM:138491 MIM:149400
neXtProt:NX_P23415 PharmGKB:PA28727 InParanoid:P23415
BindingDB:P23415 ChEMBL:CHEMBL5845 EvolutionaryTrace:P23415
GenomeRNAi:2741 NextBio:10804 ArrayExpress:P23415 Bgee:P23415
CleanEx:HS_GLRA1 Genevestigator:P23415 GermOnline:ENSG00000145888
Uniprot:P23415
Length = 457
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 128/285 (44%), Positives = 186/285 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 51 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDS 110
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 111 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 170
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V+ + LPQF IL E + R +
Sbjct: 171 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKH 229
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 334
>MGI|MGI:95747 [details] [associations]
symbol:Glra1 "glycine receptor, alpha 1 subunit" species:10090
"Mus musculus" [GO:0001508 "regulation of action potential"
evidence=IMP] [GO:0001964 "startle response" evidence=ISO;IMP]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IMP] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=ISO] [GO:0006820
"anion transport" evidence=ISO] [GO:0006821 "chloride transport"
evidence=ISO;IMP;IDA] [GO:0006936 "muscle contraction"
evidence=ISO] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=IMP]
[GO:0007340 "acrosome reaction" evidence=IMP] [GO:0007601 "visual
perception" evidence=IMP] [GO:0007628 "adult walking behavior"
evidence=IMP] [GO:0009897 "external side of plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016594 "glycine binding"
evidence=ISO;IDA;IMP] [GO:0016933 "extracellular-glycine-gated ion
channel activity" evidence=ISO] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO;IMP;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030977 "taurine binding" evidence=ISO] [GO:0034220 "ion
transmembrane transport" evidence=ISO;IMP;IDA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042391 "regulation of
membrane potential" evidence=ISO;IMP;IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043576 "regulation of respiratory gaseous exchange"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0050884 "neuromuscular
process controlling posture" evidence=IMP] [GO:0050905
"neuromuscular process" evidence=IMP] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051291 "protein
heterooligomerization" evidence=ISO] [GO:0051970 "negative
regulation of transmission of nerve impulse" evidence=ISO]
[GO:0060012 "synaptic transmission, glycinergic" evidence=ISO;IMP]
[GO:0060013 "righting reflex" evidence=IMP] [GO:0060080 "regulation
of inhibitory postsynaptic membrane potential" evidence=IMP]
[GO:2000344 "positive regulation of acrosome reaction"
evidence=ISO] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008128 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674
PROSITE:PS00236 MGI:MGI:95747 GO:GO:0043231 GO:GO:0005887
GO:GO:0009897 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601 GO:GO:0002087
GO:GO:0060080 GO:GO:0001508 GO:GO:0006936 GO:GO:0016934
GO:GO:0007340 GO:GO:0060013 GO:GO:0034707 GO:GO:0007628
EMBL:AL596207 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
HOVERGEN:HBG051707 eggNOG:NOG265706 GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 OMA:NTANPVP GO:GO:0016594 GO:GO:0030977
GO:GO:0022824 GO:GO:0051970 GO:GO:0060012 EMBL:S73717 EMBL:S73718
EMBL:X75832 EMBL:X75833 EMBL:X75834 EMBL:X75835 EMBL:X75836
EMBL:X75837 EMBL:X75838 EMBL:X75839 EMBL:X75840 IPI:IPI00405549
IPI:IPI00466207 PIR:C49970 UniGene:Mm.89320
ProteinModelPortal:Q64018 SMR:Q64018 STRING:Q64018
PhosphoSite:Q64018 PRIDE:Q64018 Ensembl:ENSMUST00000075603
Ensembl:ENSMUST00000102716 InParanoid:Q5NCT8 Bgee:Q64018
CleanEx:MM_GLRA1 Genevestigator:Q64018
GermOnline:ENSMUSG00000000263 Uniprot:Q64018
Length = 457
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 128/285 (44%), Positives = 186/285 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 51 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDS 110
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 111 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 170
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V+ + LPQF IL E + R +
Sbjct: 171 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKH 229
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 334
>RGD|2704 [details] [associations]
symbol:Glra1 "glycine receptor, alpha 1" species:10116 "Rattus
norvegicus" [GO:0001508 "regulation of action potential"
evidence=IEA;ISO] [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IEA;ISO] [GO:0005622
"intracellular" evidence=ISO] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=ISO;ISS] [GO:0006811 "ion transport" evidence=ISO;ISS]
[GO:0006820 "anion transport" evidence=IDA] [GO:0006821 "chloride
transport" evidence=ISO;ISS;IDA] [GO:0006936 "muscle contraction"
evidence=ISO;ISS] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISO;ISS] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0007340 "acrosome reaction" evidence=IEA;ISO] [GO:0007601 "visual
perception" evidence=IEA;ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0009897 "external side of plasma membrane"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO;IDA]
[GO:0016594 "glycine binding" evidence=ISO;ISS;IDA] [GO:0016933
"extracellular-glycine-gated ion channel activity" evidence=IDA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=ISO;ISS;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030977 "taurine binding" evidence=ISO;ISS] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO;ISS] [GO:0043576 "regulation of respiratory gaseous
exchange" evidence=ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0050884 "neuromuscular process controlling
posture" evidence=IEA;ISO] [GO:0050905 "neuromuscular process"
evidence=ISO] [GO:0051260 "protein homooligomerization" evidence=IDA]
[GO:0051291 "protein heterooligomerization" evidence=IDA] [GO:0051970
"negative regulation of transmission of nerve impulse"
evidence=ISO;ISS] [GO:0060012 "synaptic transmission, glycinergic"
evidence=ISO;IDA] [GO:0060013 "righting reflex" evidence=IEA;ISO]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA;ISO] [GO:2000344 "positive regulation of
acrosome reaction" evidence=IEA;ISO] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673
PRINTS:PR01674 PROSITE:PS00236 RGD:2704 GO:GO:0005783 GO:GO:0051291
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0051260 GO:GO:0006936
GO:GO:0016934 GO:GO:0034707 GO:GO:0001964 HOVERGEN:HBG051707
eggNOG:NOG265706 CTD:2741 HOGENOM:HOG000231336 KO:K05193
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0030977 GO:GO:0022824
GO:GO:0051970 GO:GO:0060012 EMBL:D00833 EMBL:X55246 EMBL:M63915
EMBL:AJ310835 EMBL:Y00276 IPI:IPI00206855 IPI:IPI00324218 PIR:JN0014
PIR:S20662 RefSeq:NP_037265.1 UniGene:Rn.10109
ProteinModelPortal:P07727 SMR:P07727 DIP:DIP-48879N STRING:P07727
Ensembl:ENSRNOT00000063889 GeneID:25674 KEGG:rno:25674 UCSC:RGD:2704
InParanoid:P07727 BindingDB:P07727 ChEMBL:CHEMBL3246 NextBio:607619
ArrayExpress:P07727 Genevestigator:P07727
GermOnline:ENSRNOG00000013588 Uniprot:P07727
Length = 457
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 128/285 (44%), Positives = 186/285 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 51 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDS 110
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 111 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 170
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V+ + LPQF IL E + R +
Sbjct: 171 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKH 229
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 334
>UNIPROTKB|E9PT06 [details] [associations]
symbol:Glra1 "Glycine receptor subunit alpha-1"
species:10116 "Rattus norvegicus" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 RGD:2704
GO:GO:0043231 GO:GO:0005887 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0007628
GO:GO:2000344 GO:GO:0001964 GO:GO:0050884 GO:GO:0016594
GO:GO:0030977 GO:GO:0022824 GO:GO:0051970 GO:GO:0060012
IPI:IPI01007606 Ensembl:ENSRNOT00000066564 ArrayExpress:E9PT06
Uniprot:E9PT06
Length = 456
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 128/285 (44%), Positives = 186/285 (65%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA++ D+
Sbjct: 51 GYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDS 110
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H++T NKL+R++ +G++ Y +R T TLAC MDL
Sbjct: 111 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDL 170
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEK 231
+P+D Q C +++ES+GYT+ D++ W+E V+ + LPQF IL E + R +
Sbjct: 171 KNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQF-ILKEEKDLRYCTKH 229
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + F L+R +GY++ Q Y+PS+LIV+LSW+SFWIN +A ARV
Sbjct: 230 YNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVL 289
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 290 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 334
>UNIPROTKB|E1B988 [details] [associations]
symbol:GABRR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 KO:K05190 CTD:200959 OMA:MDFTMTF
EMBL:DAAA02000976 EMBL:DAAA02000977 IPI:IPI00686902
RefSeq:NP_001179448.1 UniGene:Bt.106502 ProteinModelPortal:E1B988
Ensembl:ENSBTAT00000001857 GeneID:520166 KEGG:bta:520166
NextBio:20873038 Uniprot:E1B988
Length = 468
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 129/291 (44%), Positives = 186/291 (63%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFS 109
Q+LH +D +RP FGG P+ VG+D+ + S DSISEV MD+T+T YL YWKD+RLAF
Sbjct: 63 QILHIEDHDFAMRPGFGGSPVPVGIDVQVESIDSISEVDMDFTMTFYLRHYWKDERLAFP 122
Query: 110 SE-DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S+ ++ +T +KIWVPD FF + K SF+HD T N ++R++ DGS+ + +R T +
Sbjct: 123 SKTNKSMTFDHRLIKKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGSVLFSVRITVSA 182
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
C MD +PLD QNC++E+ESY Y D+++YWK + E L QF I +
Sbjct: 183 MCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKHGNKSLNTDEHISLSQFFIEEFSAS 242
Query: 227 DRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAX 285
+ TG Y RL ++F L+R+I +FV QTY P++L+VMLSWVSFWI+ A ARV+
Sbjct: 243 SGFAFYSSTGWYNRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPARVSL 302
Query: 286 XXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+S+P++SY+KA+D+YL + +FVF +++EYAAVNY
Sbjct: 303 GITTVLTMSTILSGVSASMPQVSYIKAVDVYLWVSSLFVFLSVIEYAAVNY 353
>MGI|MGI:2387597 [details] [associations]
symbol:Gabrp "gamma-aminobutyric acid (GABA) A receptor, pi"
species:10090 "Mus musculus" [GO:0004890 "GABA-A receptor activity"
evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 MGI:MGI:2387597 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335
GeneTree:ENSGT00630000089571 CTD:2568 eggNOG:NOG255582 KO:K05189
OMA:ISESDMD OrthoDB:EOG4N04F2 EMBL:AK028946 EMBL:AK160577
EMBL:AL669814 EMBL:BC023693 EMBL:BC025550 EMBL:BC027245
EMBL:BC031196 IPI:IPI00154070 RefSeq:NP_666129.1 UniGene:Mm.99989
ProteinModelPortal:Q8QZW7 SMR:Q8QZW7 PhosphoSite:Q8QZW7
PRIDE:Q8QZW7 Ensembl:ENSMUST00000020366 GeneID:216643
KEGG:mmu:216643 UCSC:uc007ikm.1 InParanoid:Q8QZW7 BindingDB:Q8QZW7
ChEMBL:CHEMBL2746 NextBio:375250 Bgee:Q8QZW7 CleanEx:MM_GABRP
Genevestigator:Q8QZW7 GermOnline:ENSMUSG00000020159 Uniprot:Q8QZW7
Length = 440
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 133/288 (46%), Positives = 179/288 (62%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L GY+ LRPNFGGDP+ + + L IAS SISE +MDYT T+YL Q W D RL F +
Sbjct: 44 LTAGYNKFLRPNFGGDPVRIALTLDIASISSISESNMDYTATIYLRQRWTDPRLVFEG-N 102
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+ C M
Sbjct: 103 KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVTCNM 162
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T
Sbjct: 163 DLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQQYFTLVTVS 222
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXX 290
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR
Sbjct: 223 QQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTV 282
Query: 291 XXXXXXXXXXRSSLPRIS-YVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
R+SLP + ++KAID+YL +CF FVF ALLEYA +YS
Sbjct: 283 LSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYS 330
>ZFIN|ZDB-GENE-010410-3 [details] [associations]
symbol:glra4a "glycine receptor, alpha 4a"
species:7955 "Danio rerio" [GO:0016594 "glycine binding"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA;IDA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0043200 "response to amino acid stimulus" evidence=IDA]
[GO:0007417 "central nervous system development" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 ZFIN:ZDB-GENE-010410-3 GO:GO:0045664
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007417 GO:GO:0016934 GO:GO:0043200
HOVERGEN:HBG051707 eggNOG:NOG265706 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ EMBL:BC090676
EMBL:GQ406229 IPI:IPI00496864 UniGene:Dr.82595 SMR:Q5CZW5
Uniprot:Q5CZW5
Length = 457
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 128/284 (45%), Positives = 183/284 (64%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYSEYPDAS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTILGHETNDRKEK-L 232
+P+D Q CT+++ES+GYT+ D++ W + PV+ ++ LPQF + + K
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLIFEWLSDNPVQVADDLTLPQFVLKEEKDLGYCTKHY 236
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXX 292
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV
Sbjct: 237 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLT 296
Query: 293 XXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 297 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>ZFIN|ZDB-GENE-020402-2 [details] [associations]
symbol:glra4b "glycine receptor, alpha 4b"
species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 ZFIN:ZDB-GENE-020402-2 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 EMBL:BX470076 IPI:IPI00998123
ProteinModelPortal:F1QTT1 Ensembl:ENSDART00000006474
ArrayExpress:F1QTT1 Uniprot:F1QTT1
Length = 537
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 127/284 (44%), Positives = 182/284 (64%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+ D+
Sbjct: 101 GYDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYKEYPDDS 160
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 161 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLILSCPMDL 220
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTILGHETNDRKEK-L 232
+P+D Q CT+++ES+GYT+ D++ W E PV+ ++ LPQF + + K
Sbjct: 221 KNFPMDTQTCTMQLESFGYTMNDLIFQWLDEGPVQVADDLMLPQFVLKEEKDLGYCTKHY 280
Query: 233 ATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXX 292
TG + + + F L+R +GY++ Q Y+PS+L V+LSWVSFWIN +A ARV
Sbjct: 281 NTGKFTCIEVKFHLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAPARVGLGITTVLT 340
Query: 293 XXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 341 MTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 384
>RGD|621564 [details] [associations]
symbol:Gabrr3 "gamma-aminobutyric acid (GABA) A receptor, rho 3"
species:10116 "Rattus norvegicus" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 RGD:621564 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707
eggNOG:NOG77438 HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571
KO:K05190 CTD:200959 EMBL:D50671 IPI:IPI00199472 PIR:S65756
RefSeq:NP_620252.1 UniGene:Rn.10670 ProteinModelPortal:P50573
Ensembl:ENSRNOT00000002281 GeneID:192258 KEGG:rno:192258
UCSC:RGD:621564 InParanoid:P50573 OMA:MDFTMTF OrthoDB:EOG41G343
BindingDB:P50573 ChEMBL:CHEMBL5454 NextBio:622926
Genevestigator:P50573 GermOnline:ENSRNOG00000001679 Uniprot:P50573
Length = 464
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 128/291 (43%), Positives = 186/291 (63%)
Query: 52 QLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF- 108
QLLH +D RP FGG P+ VG+D+ + S DSISEV+MD+T+T YL YWKD+RL+F
Sbjct: 60 QLLHIEDHDFSTRPGFGGSPVPVGIDVQVESIDSISEVNMDFTMTFYLRHYWKDERLSFP 119
Query: 109 SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTL 168
S+ ++ +T +KIWVPD FF + K SF+HD T N ++R++ DG++ + +R T +
Sbjct: 120 STTNKSMTFDRRLIQKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGNVLFSLRITVSA 179
Query: 169 ACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETN 226
C MD +PLD QNC++E+ESY Y D+++YWK + E L QF I +
Sbjct: 180 MCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKHGNKSLNTEEHISLSQFFIEEFSAS 239
Query: 227 DRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAX 285
+ TG Y RL ++F L+R+I +FV QTY P++L+VMLSWVSFWI+ A ARV+
Sbjct: 240 SGLAFYSSTGWYYRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPARVSL 299
Query: 286 XXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+S+P++SYVKA+D+Y+ + +FVF +++EYAAVNY
Sbjct: 300 GITTVLTMSTIVTGVSASMPQVSYVKAVDVYMWVSSLFVFLSVIEYAAVNY 350
>UNIPROTKB|F1NHG7 [details] [associations]
symbol:GABRR3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 EMBL:AADN02032647 EMBL:AADN02032648
EMBL:AADN02032649 EMBL:AADN02032650 EMBL:AADN02032651
IPI:IPI00576866 Ensembl:ENSGALT00000023288 OMA:ASGMYNI
Uniprot:F1NHG7
Length = 427
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 125/289 (43%), Positives = 186/289 (64%)
Query: 54 LHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAF-SSED 112
+ +D LRP FGG P+ VG+D+ + S DSISEV MD+T+T+YL YWKD+RL+F S+++
Sbjct: 24 IEDHDFALRPGFGGSPIPVGIDVQVESIDSISEVDMDFTMTLYLRHYWKDERLSFRSTKN 83
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR-FTTTLACM 171
+ +T G +KIWVPD FF + K SF+HD T N ++R+ DG++ + +R T + C
Sbjct: 84 KSMTFDGRLIKKIWVPDVFFVHSKRSFIHDTTVENVMLRVYPDGNVLFSLRRITVSAMCF 143
Query: 172 MDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRK 229
MD +PLD QNC++E+ESY Y D+++YWK + E L QF I +
Sbjct: 144 MDFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNESLSTDEHISLSQFFIEEFSASSGL 203
Query: 230 EKLAT--GTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXX 287
++ G Y RL ++F L+R+I +FV Q+Y P++L+VMLSWVSFWI+ A ARV+
Sbjct: 204 AFYSSTAGWYNRLFINFALRRHIFFFVLQSYFPAMLMVMLSWVSFWIDRRAVPARVSLGI 263
Query: 288 XXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+S+P++SY+KA+D+YL + F+FVF +++EYAAVNY
Sbjct: 264 TTVLTMSTIITGVSASMPQVSYIKAVDVYLWISFLFVFLSVIEYAAVNY 312
>UNIPROTKB|A8MPY1 [details] [associations]
symbol:GABRR3 "Gamma-aminobutyric acid receptor subunit
rho-3" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=NAS] [GO:0007268 "synaptic transmission" evidence=NAS;TAS]
[GO:0004890 "GABA-A receptor activity" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_15518 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
KO:K05190 EMBL:AC026100 EMBL:Y18994 IPI:IPI00879466
RefSeq:NP_001099050.1 UniGene:Hs.534578 ProteinModelPortal:A8MPY1
SMR:A8MPY1 PhosphoSite:A8MPY1 PRIDE:A8MPY1 GeneID:200959
KEGG:hsa:200959 CTD:200959 GeneCards:GC03M097705 HGNC:HGNC:17969
neXtProt:NX_A8MPY1 PharmGKB:PA134952133 BindingDB:A8MPY1
ChEMBL:CHEMBL2394 GenomeRNAi:200959 NextBio:90035 CleanEx:HS_GABRR3
Genevestigator:A8MPY1 Uniprot:A8MPY1
Length = 467
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 128/295 (43%), Positives = 184/295 (62%)
Query: 48 QTISQLLH--GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDR 105
Q QLLH D +RP FGG P+ VG+D+ + S DSISE +MD+T+T YL YWKD+R
Sbjct: 59 QKYEQLLHIEDNDFAMRPGFGGSPVPVGIDVHVESIDSISETNMDFTMTFYLRHYWKDER 118
Query: 106 LAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
L+F S+ ++ +T KIWVPD FF + K SF+HD T N ++R++ DG++ +R
Sbjct: 119 LSFPSTANKSMTFDHRLTRKIWVPDIFFVHSKRSFIHDTTMENIMLRVHPDGNVLLSLRI 178
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILG 222
T + C MD +PLD QNC++E+ESY Y D+++YWK + E L QF I
Sbjct: 179 TVSAMCFMDFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNKSLNTEEHMSLSQFFIED 238
Query: 223 HETNDRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSA 281
+ + TG Y RL ++F L+R++ +FV QTY P+IL+VMLSWVSFWI+ A A
Sbjct: 239 FSASSGLAFYSSTGWYNRLFINFVLRRHVFFFVLQTYFPAILMVMLSWVSFWIDRRAVPA 298
Query: 282 RVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
RV+ +S+P++SY+KA+D+YL + +FVF +++EYAAVNY
Sbjct: 299 RVSLGITTVLTMSTIITAVSASMPQVSYLKAVDVYLWVSSLFVFLSVIEYAAVNY 353
>UNIPROTKB|F1RYC5 [details] [associations]
symbol:LOC100525376 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 KO:K05271 EMBL:FP015842 EMBL:FP326726
RefSeq:XP_003135319.1 UniGene:Ssc.93565 Ensembl:ENSSSCT00000013704
GeneID:100525376 KEGG:ssc:100525376 OMA:FYFASLC Uniprot:F1RYC5
Length = 457
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 129/285 (45%), Positives = 182/285 (63%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TP-VRGVEEAQLPQFTILGHETNDRKEK- 231
+P+D Q CT+++ES+GYT+ D+V W E P V+ E LPQF + + K
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTKH 236
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV
Sbjct: 237 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVL 296
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 297 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 341
>UNIPROTKB|E2RCM7 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 CTD:441509 KO:K05271 OMA:IQESRFY
EMBL:AAEX03026730 RefSeq:XP_549155.2 ProteinModelPortal:E2RCM7
Ensembl:ENSCAFT00000028247 GeneID:492035 KEGG:cfa:492035
NextBio:20864703 Uniprot:E2RCM7
Length = 457
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 128/285 (44%), Positives = 183/285 (64%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYQEYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TP-VRGVEEAQLPQFTILGHETNDRKEK- 231
+P+D Q CT+++ES+GYT+ D+V W E P V+ E LPQF + + K
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTKH 236
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV+
Sbjct: 237 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVSLGITTVL 296
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 297 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 341
>UNIPROTKB|Q5JXX5 [details] [associations]
symbol:GLRA4 "Glycine receptor subunit alpha-4"
species:9606 "Homo sapiens" [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] Reactome:REACT_15518 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG265706 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ EMBL:Z93848
EMBL:AL049610 IPI:IPI00456931 RefSeq:NP_001019623.2
UniGene:Hs.533289 ProteinModelPortal:Q5JXX5 SMR:Q5JXX5
STRING:Q5JXX5 PhosphoSite:Q5JXX5 DMDM:262527577 PRIDE:Q5JXX5
Ensembl:ENST00000372617 GeneID:441509 KEGG:hsa:441509
UCSC:uc010nou.2 CTD:441509 GeneCards:GC0XM102962 HGNC:HGNC:31715
HPA:HPA044759 neXtProt:NX_Q5JXX5 PharmGKB:PA142671731
InParanoid:Q5JXX5 KO:K05271 OMA:IQESRFY GenomeRNAi:441509
NextBio:110250 ArrayExpress:Q5JXX5 Bgee:Q5JXX5 CleanEx:HS_GLRA4
Genevestigator:Q5JXX5 Uniprot:Q5JXX5
Length = 417
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 127/285 (44%), Positives = 183/285 (64%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF SI++ +MDY + ++L Q W D RL++ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFSSITKTTMDYRVNVFLRQQWNDPRLSYREYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C+MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCLMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TP-VRGVEEAQLPQFTILGHETNDRKEK- 231
+P+D Q CT+++ES+GYT+ D+V W E P V+ E LPQF + + K
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAPAVQVAEGLTLPQFILRDEKDLGCCTKH 236
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV
Sbjct: 237 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVL 296
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAA+N+
Sbjct: 297 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAINF 341
>UNIPROTKB|F1NEM1 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 OMA:FYFASLC EMBL:AADN02013212 IPI:IPI00580780
Ensembl:ENSGALT00000007899 Uniprot:F1NEM1
Length = 453
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 127/285 (44%), Positives = 181/285 (63%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 54 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 113
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 114 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 173
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKETP--VRGVEEAQLPQFTILGHETNDRKEKL 232
+P+D Q CT+++ES+GYT+ D++ W E V+ E LPQF + + K
Sbjct: 174 KNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQEAVQVAEGLTLPQFILRDEKDLGYCTKY 233
Query: 233 A-TGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV
Sbjct: 234 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVL 293
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 294 TMTTQSAGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 338
>UNIPROTKB|E1BHI1 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:IQESRFY EMBL:DAAA02071337
EMBL:DAAA02071338 IPI:IPI00708020 Ensembl:ENSBTAT00000022870
Uniprot:E1BHI1
Length = 457
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 128/285 (44%), Positives = 182/285 (63%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 57 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 116
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 176
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TP-VRGVEEAQLPQFTILGHETNDRKEK- 231
+P+D Q CT+++ES+GYT+ D++ W E P V+ E LPQF + + K
Sbjct: 177 KNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTKH 236
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV
Sbjct: 237 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVL 296
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 297 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 341
>MGI|MGI:95750 [details] [associations]
symbol:Glra4 "glycine receptor, alpha 4 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 MGI:MGI:95750 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707
eggNOG:NOG265706 GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ CTD:441509 KO:K05271
EMBL:DQ109809 EMBL:AL671887 EMBL:X75850 EMBL:X75851 EMBL:X75852
EMBL:X75853 EMBL:AF462147 IPI:IPI00474759 PIR:A49970
RefSeq:NP_034427.2 UniGene:Mm.215168 ProteinModelPortal:Q61603
SMR:Q61603 PhosphoSite:Q61603 PRIDE:Q61603
Ensembl:ENSMUST00000018739 GeneID:14657 KEGG:mmu:14657
UCSC:uc007izn.1 InParanoid:A2AEA9 BindingDB:Q61603
ChEMBL:CHEMBL3500 NextBio:286518 Bgee:Q61603 CleanEx:MM_GLRA4
Genevestigator:Q61603 GermOnline:ENSMUSG00000018595 Uniprot:Q61603
Length = 456
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 128/285 (44%), Positives = 182/285 (63%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TP-VRGVEEAQLPQFTILGHETNDRKEK- 231
+P+D Q CT+++ES+GYT+ D++ W E P V+ E LPQF + + K
Sbjct: 176 KNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTKH 235
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV
Sbjct: 236 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVL 295
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 296 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>RGD|1564103 [details] [associations]
symbol:Glra4 "glycine receptor, alpha 4" species:10116 "Rattus
norvegicus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 RGD:1564103
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ CTD:441509 KO:K05271
OMA:IQESRFY IPI:IPI00361637 RefSeq:NP_001178843.1 UniGene:Rn.228202
ProteinModelPortal:D4A4R5 Ensembl:ENSRNOT00000052302 GeneID:367912
KEGG:rno:367912 UCSC:RGD:1564103 NextBio:691840 ArrayExpress:D4A4R5
Uniprot:D4A4R5
Length = 456
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 128/285 (44%), Positives = 182/285 (63%)
Query: 56 GYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEV 114
GYD R+RPNF G P+ V ++ I SF S++E +MDY + ++L Q W D RLA+ D+
Sbjct: 56 GYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDS 115
Query: 115 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDL 174
L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C MDL
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDL 175
Query: 175 HYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TP-VRGVEEAQLPQFTILGHETNDRKEK- 231
+P+D Q CT+++ES+GYT+ D++ W E P V+ E LPQF + + K
Sbjct: 176 KNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILRDEKDLGYCTKH 235
Query: 232 LATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXX 291
TG + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV
Sbjct: 236 YNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVL 295
Query: 292 XXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 296 TMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 340
>UNIPROTKB|F1NMN1 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008130 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824
EMBL:AC145915 IPI:IPI00572144 Ensembl:ENSGALT00000017534
OMA:HANFHEV Uniprot:F1NMN1
Length = 444
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 128/289 (44%), Positives = 185/289 (64%)
Query: 54 LHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-ED 112
+ GYD R+RPNF G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D
Sbjct: 49 MSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQNWNDPRLAYSEYPD 108
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ L L + IW PD FFAN+K + H+VT NKL+R+ +G++ Y +R T L+C M
Sbjct: 109 DSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPM 168
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETN----D 227
DL +P+D Q C +++ES+GYT+ D++ W+E V+ E LPQF +L E +
Sbjct: 169 DLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVAEGLTLPQF-LLKEEKDLCYCT 227
Query: 228 RKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXX 287
+ G + + + F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA
Sbjct: 228 KHYNTEKGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGI 287
Query: 288 XXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 288 TTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 336
>UNIPROTKB|F1SQV0 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0016594 GO:GO:0022824
OMA:TTLFAFF EMBL:CU207369 EMBL:CU914724 Ensembl:ENSSSCT00000013268
Uniprot:F1SQV0
Length = 385
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 123/271 (45%), Positives = 175/271 (64%)
Query: 69 PLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWV 127
P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+ L L + IW
Sbjct: 3 PVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWK 62
Query: 128 PDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVE 187
PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL +P+D Q CT++
Sbjct: 63 PDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQ 122
Query: 188 IESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTILGH-ETNDRKEKLATGTYQRLSLSFK 245
+ES+GYT+ D++ W + PV+ E LPQF + E + TG + + + F
Sbjct: 123 LESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFH 182
Query: 246 LQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLP 305
L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA R+SLP
Sbjct: 183 LERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLP 242
Query: 306 RISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 243 KVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 273
>UNIPROTKB|K7GSI6 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
EMBL:CU207369 EMBL:CU914724 Ensembl:ENSSSCT00000033189
Uniprot:K7GSI6
Length = 385
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 122/271 (45%), Positives = 175/271 (64%)
Query: 69 PLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWV 127
P+ V ++ I SF S++E +MDY + ++L Q W D RLA+S D+ L L + IW
Sbjct: 3 PVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLDPSMLDSIWK 62
Query: 128 PDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVE 187
PD FFAN+K + HDVT NKL+R++ +G + Y +R T TL+C MDL +P+D Q CT++
Sbjct: 63 PDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQ 122
Query: 188 IESYGYTVLDVVMYW-KETPVRGVEEAQLPQFTILGH-ETNDRKEKLATGTYQRLSLSFK 245
+ES+GYT+ D++ W + PV+ E LPQF + E + TG + + + F
Sbjct: 123 LESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCTKHYNTGKFTCIEVKFH 182
Query: 246 LQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLP 305
L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARVA R+SLP
Sbjct: 183 LERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLP 242
Query: 306 RISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
++SYVKAIDI++ +C +FVFAALLEYAAVN+
Sbjct: 243 KVSYVKAIDIWMAVCLLFVFAALLEYAAVNF 273
>ZFIN|ZDB-GENE-080815-1 [details] [associations]
symbol:gabra6b "gamma-aminobutyric acid (GABA) A
receptor, alpha 6b" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-080815-1 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
EMBL:CABZ01078876 EMBL:CABZ01078877 EMBL:CABZ01078878
EMBL:CABZ01078879 IPI:IPI00962798 ProteinModelPortal:F1QGW0
Ensembl:ENSDART00000124708 Uniprot:F1QGW0
Length = 444
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 122/298 (40%), Positives = 177/298 (59%)
Query: 43 LANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWK 102
L N+T+ + +LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W
Sbjct: 28 LDNITRILDRLLDGYDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWI 87
Query: 103 DDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGM 162
DDRL F E+L L+ KIW PDTFF N K S H++T NKL R+ +G+I Y M
Sbjct: 88 DDRLKFEGPIEILRLNNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTM 147
Query: 163 RFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQF 218
R T C M L +P+D +C ++ SY Y + ++V WK+ P+ VE Q L Q+
Sbjct: 148 RLTINAECPMRLINFPMDGHSCPLKFGSYAYPMSEIVYTWKKGPLFSVEVPQESSSLLQY 207
Query: 219 TILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEA 278
++G + + K TG Y +++ F LQR +G+F+ QTY+P I+ V+L+ VSFWI+ E+
Sbjct: 208 DLIGQTVSSERLKSNTGEYIVMTVYFHLQRKMGFFLIQTYIPCIMTVILAQVSFWIDKES 267
Query: 279 TSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 268 VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 325
>UNIPROTKB|Q90845 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4MPHQ4 EMBL:X94343 IPI:IPI00571969
RefSeq:NP_990389.1 UniGene:Gga.550 ProteinModelPortal:Q90845
SMR:Q90845 Ensembl:ENSGALT00000002601 GeneID:395931 KEGG:gga:395931
CTD:2559 InParanoid:Q90845 OMA:HSDSKYH NextBio:20815996
Uniprot:Q90845
Length = 465
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 121/296 (40%), Positives = 171/296 (57%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+T+ + +LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NITRILDKLLDGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILRLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ VE Q L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLHSVEVPQESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 326
>ZFIN|ZDB-GENE-991117-1 [details] [associations]
symbol:glra1 "glycine receptor, alpha 1" species:7955
"Danio rerio" [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA;IDA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0007417 "central nervous system development" evidence=IMP]
[GO:0043200 "response to amino acid stimulus" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0005254 "chloride
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
ZFIN:ZDB-GENE-991117-1 GO:GO:0045664 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007417 GO:GO:0016934
GO:GO:0043200 HOVERGEN:HBG051707 HSSP:P23415 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 EMBL:AF488379
IPI:IPI00486644 UniGene:Dr.75842 ProteinModelPortal:Q8QG93
SMR:Q8QG93 PRIDE:Q8QG93 InParanoid:Q8QG93 ArrayExpress:Q8QG93
Bgee:Q8QG93 Uniprot:Q8QG93
Length = 459
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 122/274 (44%), Positives = 175/274 (63%)
Query: 67 GDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKI 125
G P+ V ++ I SF SI+E +MDY + ++L Q W D RLA+S D+ L L + I
Sbjct: 73 GPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSI 132
Query: 126 WVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCT 185
W PD FFAN+K + H+VT NKL+R++ +G++ Y +R T LAC MDL +P+D Q C
Sbjct: 133 WKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQTCI 192
Query: 186 VEIESYGYTVLDVVMYWKET-PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSL 242
+++ES+GYT+ D++ W E V+ + LPQF IL E + R + TG + +
Sbjct: 193 MQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEA 251
Query: 243 SFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRS 302
F L+R +GY++ Q Y+PS+LIV+LSWVSFWIN +A ARV R+
Sbjct: 252 RFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRA 311
Query: 303 SLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
SLP++SYVKAIDI++ +C +FVF+ALLEYAAVN+
Sbjct: 312 SLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNF 345
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 70/165 (42%), Positives = 101/165 (61%)
Query: 56 GYDIRLRPNF------G---------GDPLYVGMDLTIASFDSISEVSMDYTITMYLNQY 100
GYD R+RPNF G G P+ V ++ I SF SI+E +MDY + ++L Q
Sbjct: 47 GYDARIRPNFKVVDPQGSKSDGTHKKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQ 106
Query: 101 WKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSIT 159
W D RLA+S D+ L L + IW PD FFAN+K + H+VT NKL+R++ +G++
Sbjct: 107 WNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVL 166
Query: 160 YGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
Y +R T LAC MDL +P+D Q C +++ES+GYT+ D++ W E
Sbjct: 167 YSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDE 211
>MGI|MGI:95618 [details] [associations]
symbol:Gabra6 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 6" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=ISO] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008144 "drug binding" evidence=ISO]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0022851 "GABA-gated chloride ion
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO] [GO:0032809
"neuronal cell body membrane" evidence=ISO] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0043235 "receptor complex" evidence=ISO]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=ISO] [GO:0051291 "protein heterooligomerization"
evidence=ISO] [GO:0051932 "synaptic transmission, GABAergic"
evidence=ISO] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 MGI:MGI:95618 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0042734
GO:GO:0043083 GO:GO:0043235 GO:GO:0032809 GO:GO:0034707
GO:GO:0005254 GO:GO:0051932 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0008503 GO:GO:0005237 OrthoDB:EOG4MPHQ4
CTD:2559 OMA:HSDSKYH GO:GO:0022851 EMBL:X51986 EMBL:U77411
EMBL:U77409 EMBL:U77410 EMBL:AF256197 EMBL:AF256198 EMBL:AK135145
EMBL:AL645823 EMBL:BC145158 EMBL:BC145702 IPI:IPI00133501
IPI:IPI00648214 IPI:IPI00857474 IPI:IPI01008575 PIR:S11396
RefSeq:NP_001093111.1 RefSeq:NP_032094.2 UniGene:Mm.4915
ProteinModelPortal:P16305 SMR:P16305 STRING:P16305
PhosphoSite:P16305 PRIDE:P16305 Ensembl:ENSMUST00000020703
Ensembl:ENSMUST00000109286 Ensembl:ENSMUST00000155218 GeneID:14399
KEGG:mmu:14399 InParanoid:Q5SUU5 BindingDB:P16305 ChEMBL:CHEMBL4710
NextBio:285939 Bgee:P16305 Genevestigator:P16305
GermOnline:ENSMUSG00000020428 Uniprot:P16305
Length = 453
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 121/296 (40%), Positives = 171/296 (57%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL RL +G+I Y MR
Sbjct: 91 RLKFKGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE----EAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ VE + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKTEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 326
>RGD|61861 [details] [associations]
symbol:Gabra6 "gamma-aminobutyric acid (GABA) A receptor, alpha 6"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005237 "inhibitory
extracellular ligand-gated ion channel activity" evidence=IMP]
[GO:0005254 "chloride channel activity" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IDA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008144 "drug binding" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0032809 "neuronal cell body
membrane" evidence=IDA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IDA]
[GO:0043235 "receptor complex" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA;IDA] [GO:0051291 "protein
heterooligomerization" evidence=IPI] [GO:0051932 "synaptic
transmission, GABAergic" evidence=IMP] [GO:0008503 "benzodiazepine
receptor activity" evidence=IMP] [GO:0022851 "GABA-gated chloride
ion channel activity" evidence=IMP] InterPro:IPR001390
InterPro:IPR005436 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236 RGD:61861
GO:GO:0051291 GO:GO:0005887 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0042734 GO:GO:0043235 GO:GO:0032809
GO:GO:0034707 GO:GO:0005254 GO:GO:0051932 KO:K05175 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 GO:GO:0005237 CTD:2559
EMBL:L08495 EMBL:X55742 IPI:IPI00206049 PIR:S11087
RefSeq:NP_068613.1 UniGene:Rn.29890 ProteinModelPortal:P30191
SMR:P30191 STRING:P30191 GeneID:29708 KEGG:rno:29708 UCSC:RGD:61861
BindingDB:P30191 ChEMBL:CHEMBL293 NextBio:610131 ArrayExpress:P30191
Genevestigator:P30191 GermOnline:ENSRNOG00000003569 Uniprot:P30191
Length = 453
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 121/296 (40%), Positives = 171/296 (57%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL RL +G+I Y MR
Sbjct: 91 RLKFKGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMHNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE----EAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ VE + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 326
>UNIPROTKB|F1LWJ7 [details] [associations]
symbol:Gabra6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005436 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236 RGD:61861
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 IPI:IPI00565653 Ensembl:ENSRNOT00000047262
ArrayExpress:F1LWJ7 Uniprot:F1LWJ7
Length = 452
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 121/296 (40%), Positives = 171/296 (57%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 30 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 89
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL RL +G+I Y MR
Sbjct: 90 RLKFKGPAEILSLNNLMVSKIWTPDTFFQNGKKSIAHNMTTPNKLFRLMQNGTILYTMRL 149
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE----EAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ VE + L Q+ +
Sbjct: 150 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 209
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 210 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 269
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 270 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 325
>UNIPROTKB|P30191 [details] [associations]
symbol:Gabra6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 RGD:61861 GO:GO:0051291 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0042734
GO:GO:0043235 GO:GO:0032809 GO:GO:0034707 GO:GO:0005254
GO:GO:0051932 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0005237 CTD:2559 EMBL:L08495 EMBL:X55742
IPI:IPI00206049 PIR:S11087 RefSeq:NP_068613.1 UniGene:Rn.29890
ProteinModelPortal:P30191 SMR:P30191 STRING:P30191 GeneID:29708
KEGG:rno:29708 UCSC:RGD:61861 BindingDB:P30191 ChEMBL:CHEMBL293
NextBio:610131 ArrayExpress:P30191 Genevestigator:P30191
GermOnline:ENSRNOG00000003569 Uniprot:P30191
Length = 453
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 121/296 (40%), Positives = 171/296 (57%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL RL +G+I Y MR
Sbjct: 91 RLKFKGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMHNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE----EAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ VE + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 326
>UNIPROTKB|E1BE96 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2559
OMA:HSDSKYH EMBL:DAAA02020909 EMBL:DAAA02020910 IPI:IPI00704287
RefSeq:NP_001137557.1 UniGene:Bt.39107 ProteinModelPortal:E1BE96
Ensembl:ENSBTAT00000017637 GeneID:539194 KEGG:bta:539194
NextBio:20877838 Uniprot:E1BE96
Length = 453
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 119/296 (40%), Positives = 171/296 (57%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NISRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE----EAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ VE + L Q+ +
Sbjct: 151 TINADCPMKLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 326
>UNIPROTKB|E2R4R7 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01670 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
EMBL:AAEX03008512 EMBL:AAEX03008511 Ensembl:ENSCAFT00000004969
OMA:RWTGTVE Uniprot:E2R4R7
Length = 364
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 118/252 (46%), Positives = 164/252 (65%)
Query: 89 MDYTITMYLNQYWKDDRLAF-SSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERN 147
MD+T+T+YL YWKD+RLAF S+ ++ +T G +KIWVPD FF + K SF HD T N
Sbjct: 1 MDFTMTLYLRHYWKDERLAFPSTSNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDN 60
Query: 148 KLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ET 205
++R+ DG + Y MR T T C MD ++PLD+Q C++E+ESY YT D+++YWK +
Sbjct: 61 IMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDE 120
Query: 206 PVRGVEEAQLPQFTILGHETNDRKEKLA-TGTYQRLSLSFKLQRNIGYFVFQTYLPSILI 264
++ E+ L QF I T R + TG Y RL ++F L+R+I +F+ QTY P+ L+
Sbjct: 121 SLKTDEKISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLM 180
Query: 265 VMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFV 324
VMLSWVSFWI+ A ARV+ +S+PR+SY+KA+DIYL + FVFV
Sbjct: 181 VMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFV 240
Query: 325 FAALLEYAAVNY 336
F ++LEYAAVNY
Sbjct: 241 FLSVLEYAAVNY 252
>UNIPROTKB|E2RSQ0 [details] [associations]
symbol:GABRG2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030534 "adult behavior" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:GFTSQKS EMBL:AAEX03003042
Ensembl:ENSCAFT00000027292 NextBio:20862353 Uniprot:E2RSQ0
Length = 453
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 122/323 (37%), Positives = 186/323 (57%)
Query: 18 LESQIGNSDSEKLRLCHKKSATTERL--ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMD 75
L SQ + D E +K T ++ +VT ++ LL GYD +LRP+ G P + D
Sbjct: 15 LTSQKSDDDYEDYA-SNKTWVLTPKVPEGDVTVILNNLLEGYDNKLRPDIGVKPTLIHTD 73
Query: 76 LTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFAND 135
+ + S ++ ++M+YTI ++ Q W D RL F+S +VL L+ + KIW+PDTFF N
Sbjct: 74 MYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNS 133
Query: 136 KNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTV 195
K + H +T N+++R+ DG + Y +R T C + LH +P+D +C +E SYGY
Sbjct: 134 KKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPR 193
Query: 196 LDVVMYWKETPVR-GVEEA-QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYF 253
++V WK + V G + +L QF+ +G K +G Y +S+ F L R +GYF
Sbjct: 194 EEIVYQWKRSSVEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYF 253
Query: 254 VFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAI 313
QTY+P LIV+LSWVSFWIN +A AR + R SLP++SYV A+
Sbjct: 254 TIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAM 313
Query: 314 DIYLVMCFVFVFAALLEYAAVNY 336
D+++ +CF+FVF+AL+EY ++Y
Sbjct: 314 DLFVSVCFIFVFSALVEYGTLHY 336
>UNIPROTKB|Q16445 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0008503 "benzodiazepine receptor activity" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0005887 EMBL:CH471062 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0030425 GO:GO:0042734 GO:GO:0043083
GO:GO:0043235 GO:GO:0032809 GO:GO:0034707 GO:GO:0005254
DrugBank:DB00186 GO:GO:0051932 DrugBank:DB00683 DrugBank:DB01544
DrugBank:DB00404 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 GO:GO:0005237 OrthoDB:EOG4MPHQ4
CTD:2559 OMA:HSDSKYH EMBL:S81944 EMBL:AK289461 EMBL:BC096241
EMBL:BC096242 EMBL:BC099640 EMBL:BC099641 IPI:IPI00002215
RefSeq:NP_000802.2 UniGene:Hs.90791 ProteinModelPortal:Q16445
SMR:Q16445 STRING:Q16445 PhosphoSite:Q16445 DMDM:126302548
PRIDE:Q16445 Ensembl:ENST00000274545 GeneID:2559 KEGG:hsa:2559
UCSC:uc003lyu.2 GeneCards:GC05P161045 H-InvDB:HIX0005382
HGNC:HGNC:4080 MIM:137143 neXtProt:NX_Q16445 PharmGKB:PA28494
InParanoid:Q16445 PhylomeDB:Q16445 BindingDB:Q16445
ChEMBL:CHEMBL2579 GenomeRNAi:2559 NextBio:10107 ArrayExpress:Q16445
Bgee:Q16445 CleanEx:HS_GABRA6 Genevestigator:Q16445
GermOnline:ENSG00000145863 GO:GO:0022851 Uniprot:Q16445
Length = 453
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 120/296 (40%), Positives = 171/296 (57%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 90
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 91 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 150
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE----EAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ VE + L Q+ +
Sbjct: 151 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 210
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 211 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 270
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 271 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 326
>UNIPROTKB|E2RSN3 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:HSDSKYH
EMBL:AAEX03003042 Ensembl:ENSCAFT00000027311 NextBio:20862356
Uniprot:E2RSN3
Length = 550
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 119/296 (40%), Positives = 171/296 (57%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 48 NISRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 107
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 108 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 167
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE----EAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ VE + L Q+ +
Sbjct: 168 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 227
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 228 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 287
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 288 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 343
>UNIPROTKB|E1C890 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:2001023 "regulation of response to drug"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005434
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 CTD:2557 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:2001023 OMA:KEPAIAM
EMBL:AADN02031278 IPI:IPI00602335 RefSeq:XP_420724.2
ProteinModelPortal:E1C890 Ensembl:ENSGALT00000022968 GeneID:422770
KEGG:gga:422770 NextBio:20825357 Uniprot:E1C890
Length = 554
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 122/307 (39%), Positives = 176/307 (57%)
Query: 36 KSATTERL--ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTI 93
+S E+L N T ++ LL GYD RLRP FGG V D+ + SF +S+V M+YT+
Sbjct: 35 QSKKEEKLWPENFTSILNSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTM 94
Query: 94 TMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
++ Q W D RL + E+L L+ K+W PDTFF N K S H++T NKL R+
Sbjct: 95 DVFFRQTWVDKRLKYDGPIEILRLNNLMVSKVWTPDTFFRNGKKSVAHNMTAPNKLFRIM 154
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE-- 211
+G+I Y MR T + C M L +P+D C ++ SY Y +++ W + P + VE
Sbjct: 155 RNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVP 214
Query: 212 --EAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
+ L Q+ +LGH + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS
Sbjct: 215 EESSSLVQYDLLGHTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQ 274
Query: 270 VSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN E+ AR R SLP++SY A+D ++ +CF FVF+AL+
Sbjct: 275 VSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 334
Query: 330 EYAAVNY 336
E+AAVNY
Sbjct: 335 EFAAVNY 341
>UNIPROTKB|P21548 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 KO:K05186 CTD:2566 EMBL:X54944 IPI:IPI00577501
PIR:S13086 RefSeq:NP_990676.1 UniGene:Gga.50106
ProteinModelPortal:P21548 SMR:P21548 GeneID:396289 KEGG:gga:396289
NextBio:20816340 Uniprot:P21548
Length = 474
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 122/329 (37%), Positives = 189/329 (57%)
Query: 12 FNSENELESQIGNSDSEKLRLCHKKSATTERL--ANVTQTISQLLHGYDIRLRPNFGGDP 69
F S + +Q G+ D E +K T ++ ++VT ++ LL GYD +LRP+ G P
Sbjct: 30 FLSLIQCSTQKGDDDYEDYT-SNKTWVLTPKVHESDVTLILNGLLEGYDNKLRPDIGVKP 88
Query: 70 LYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPD 129
+ D+ + S ++ ++M+YTI ++ Q W D RL F+S +VL L+ + KIW+PD
Sbjct: 89 TVIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKFNSTIKVLRLNSNMVGKIWIPD 148
Query: 130 TFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIE 189
TFF N K + H +T N+++R+ DG + Y +R T C + LH +P+D +C +E
Sbjct: 149 TFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDAHSCPLEFS 208
Query: 190 SYGYTVLDVVMYWKETPVR-GVEEA-QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQ 247
SYGY +++ WK + V G + +L QF+ G K +G Y +S+ F L
Sbjct: 209 SYGYPREEIIYQWKRSSVEVGDTRSWRLYQFSFTGLRNTTEVVKTTSGDYVVMSVYFNLS 268
Query: 248 RNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRI 307
R +GYF QTY+P LIV+LSWVSFWIN +A AR + R SLP++
Sbjct: 269 RRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKV 328
Query: 308 SYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 329 SYVTAMDLFVSVCFIFVFSALVEYGTLHY 357
>UNIPROTKB|P18507 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
[GO:0051932 "synaptic transmission, GABAergic" evidence=ISS]
[GO:0032590 "dendrite membrane" evidence=ISS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0032590 GO:GO:0034707 GO:GO:0005254
Orphanet:64280 GO:GO:0051932 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0008503 Orphanet:36387 KO:K05186
OrthoDB:EOG44BB25 CTD:2566 EMBL:X15376 EMBL:AF165124 EMBL:BC059389
EMBL:BC069348 EMBL:BC074795 IPI:IPI00000023 IPI:IPI00419200
PIR:S03905 RefSeq:NP_000807.2 RefSeq:NP_944494.1 UniGene:Hs.7195
ProteinModelPortal:P18507 SMR:P18507 STRING:P18507
PhosphoSite:P18507 DMDM:116242488 PRIDE:P18507
Ensembl:ENST00000356592 Ensembl:ENST00000361925 GeneID:2566
KEGG:hsa:2566 UCSC:uc003lyy.4 UCSC:uc003lyz.4 GeneCards:GC05P161494
HGNC:HGNC:4087 MIM:137164 MIM:604233 MIM:607208 MIM:607681
MIM:611277 neXtProt:NX_P18507 Orphanet:33069 PharmGKB:PA28501
BindingDB:P18507 ChEMBL:CHEMBL1788 GenomeRNAi:2566 NextBio:10145
ArrayExpress:P18507 Bgee:P18507 CleanEx:HS_GABRG2
Genevestigator:P18507 GermOnline:ENSG00000113327 Uniprot:P18507
Length = 467
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 115/294 (39%), Positives = 175/294 (59%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDR 124
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 125 RLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRL 184
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR-GVEEA-QLPQFTILG 222
T C + LH +P+D +C +E SYGY ++V WK + V G + +L QF+ +G
Sbjct: 185 TIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFVG 244
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A AR
Sbjct: 245 LRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPAR 304
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 305 TSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>UNIPROTKB|F1RR72 [details] [associations]
symbol:GABRG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030534 "adult behavior" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0009791
GO:GO:0030534 GO:GO:0006821 GeneTree:ENSGT00540000070314 KO:K05186
CTD:2566 OMA:GFTSQKS EMBL:CU929724 RefSeq:XP_003359873.1
UniGene:Ssc.93419 Ensembl:ENSSSCT00000018537 GeneID:100516405
KEGG:ssc:100516405 Uniprot:F1RR72
Length = 467
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 121/323 (37%), Positives = 186/323 (57%)
Query: 18 LESQIGNSDSEKLRLCHKKSATTERL--ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMD 75
L SQ + D E +K T ++ +VT ++ LL GYD +LRP+ G P + D
Sbjct: 37 LTSQKSDDDYEDYA-SNKTWVLTPKVPEGDVTVILNNLLEGYDNKLRPDIGVKPTLIHTD 95
Query: 76 LTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFAND 135
+ + S ++ ++M+YTI ++ Q W D RL F+S +VL L+ + KIW+PDTFF N
Sbjct: 96 MYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNS 155
Query: 136 KNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTV 195
K + H +T N+++R+ DG + Y +R T C + LH +P+D +C +E SYGY
Sbjct: 156 KKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPR 215
Query: 196 LDVVMYWKETPVR-GVEEA-QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYF 253
++V WK + V G + +L QF+ +G K +G Y +++ F L R +GYF
Sbjct: 216 EEIVYQWKRSSVEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMTVYFDLSRRMGYF 275
Query: 254 VFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAI 313
QTY+P LIV+LSWVSFWIN +A AR + R SLP++SYV A+
Sbjct: 276 TIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAM 335
Query: 314 DIYLVMCFVFVFAALLEYAAVNY 336
D+++ +CF+FVF+AL+EY ++Y
Sbjct: 336 DLFVSVCFIFVFSALVEYGTLHY 358
>MGI|MGI:95623 [details] [associations]
symbol:Gabrg2 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO;IDA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IDA] [GO:0007268 "synaptic transmission"
evidence=IDA] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=IDA] [GO:0030534 "adult
behavior" evidence=IMP] [GO:0032590 "dendrite membrane"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISO] [GO:0060077 "inhibitory synapse"
evidence=ISO] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 MGI:MGI:95623 GO:GO:0005886 GO:GO:0005737
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0034707 GO:GO:0005254
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 KO:K05186 OrthoDB:EOG44BB25 CTD:2566
EMBL:M86572 EMBL:M62374 EMBL:AF233775 EMBL:AF233776 EMBL:AF233777
EMBL:AF233778 EMBL:AF233779 EMBL:AF233780 EMBL:AF233781
EMBL:AF233782 EMBL:AF233783 EMBL:AF233784 EMBL:AF233785
EMBL:AF233786 EMBL:AF233787 EMBL:AF233788 EMBL:AF233789
EMBL:AF233790 EMBL:AF233791 EMBL:AF233792 EMBL:AF233793
EMBL:AF233794 EMBL:AF233795 EMBL:AF233796 EMBL:AF233797
EMBL:AF233798 EMBL:AF233799 EMBL:AF233800 EMBL:AF233801
EMBL:AF233802 EMBL:BC031762 IPI:IPI00131369 IPI:IPI00228358
PIR:JH0316 PIR:JH0317 RefSeq:NP_032099.1 UniGene:Mm.5309
ProteinModelPortal:P22723 SMR:P22723 DIP:DIP-48995N STRING:P22723
PhosphoSite:P22723 PRIDE:P22723 Ensembl:ENSMUST00000070725
Ensembl:ENSMUST00000070735 GeneID:14406 KEGG:mmu:14406
UCSC:uc007imb.1 InParanoid:P22723 OMA:GFTSQKS BindingDB:P22723
ChEMBL:CHEMBL2941 NextBio:285971 Bgee:P22723 Genevestigator:P22723
GermOnline:ENSMUSG00000020436 Uniprot:P22723
Length = 474
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 115/294 (39%), Positives = 175/294 (59%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 DVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDR 123
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 124 RLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRL 183
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR-GVEEA-QLPQFTILG 222
T C + LH +P+D +C +E SYGY ++V WK + V G + +L QF+ +G
Sbjct: 184 TIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFVG 243
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A AR
Sbjct: 244 LRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPAR 303
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 304 TSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 357
>RGD|61966 [details] [associations]
symbol:Gabrg2 "gamma-aminobutyric acid (GABA) A receptor, gamma 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;ISO;IDA;TAS] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005237
"inhibitory extracellular ligand-gated ion channel activity"
evidence=TAS] [GO:0005254 "chloride channel activity" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA;TAS]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA;ISO;TAS] [GO:0007268 "synaptic transmission"
evidence=IEA;ISO] [GO:0009791 "post-embryonic development"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=IEA;ISO] [GO:0030534 "adult behavior" evidence=IEA;ISO]
[GO:0032590 "dendrite membrane" evidence=IDA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IDA] [GO:0060077 "inhibitory synapse" evidence=IDA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
RGD:61966 GO:GO:0005737 GO:GO:0030054 GO:GO:0045211 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0032590 GO:GO:0034707
GO:GO:0005254 PDB:2PR9 PDBsum:2PR9 GO:GO:0051932 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 GO:GO:0005237
GeneTree:ENSGT00540000070314 GO:GO:0060077 KO:K05186 CTD:2566
EMBL:L08497 IPI:IPI00192646 PIR:JQ0077 RefSeq:NP_899156.1
UniGene:Rn.230132 ProteinModelPortal:P18508 SMR:P18508
MINT:MINT-3371576 STRING:P18508 PRIDE:P18508
Ensembl:ENSRNOT00000004619 GeneID:29709 KEGG:rno:29709
UCSC:RGD:61966 BindingDB:P18508 ChEMBL:CHEMBL297
EvolutionaryTrace:P18508 NextBio:610135 ArrayExpress:P18508
Genevestigator:P18508 GermOnline:ENSRNOG00000003241 Uniprot:P18508
Length = 466
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 115/294 (39%), Positives = 175/294 (59%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 DVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDR 123
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 124 RLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRL 183
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR-GVEEA-QLPQFTILG 222
T C + LH +P+D +C +E SYGY ++V WK + V G + +L QF+ +G
Sbjct: 184 TIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFVG 243
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A AR
Sbjct: 244 LRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPAR 303
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 304 TSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 357
>UNIPROTKB|F1M4V9 [details] [associations]
symbol:Gabrg2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR005437
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236
RGD:61966 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 IPI:IPI00950881 Ensembl:ENSRNOT00000065955
ArrayExpress:F1M4V9 Uniprot:F1M4V9
Length = 445
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 115/294 (39%), Positives = 175/294 (59%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 43 DVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDR 102
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 103 RLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRL 162
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR-GVEEA-QLPQFTILG 222
T C + LH +P+D +C +E SYGY ++V WK + V G + +L QF+ +G
Sbjct: 163 TIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFVG 222
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A AR
Sbjct: 223 LRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPAR 282
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 283 TSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 336
>UNIPROTKB|Q6PW52 [details] [associations]
symbol:Gabrg2 "GABA-A gamma2 long isoform" species:10116
"Rattus norvegicus" [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
RGD:61966 GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0009791
GO:GO:0030534 EMBL:CH473948 GO:GO:0006821 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:GFTSQKS UniGene:Rn.230132 EMBL:AY574252
IPI:IPI00202998 SMR:Q6PW52 STRING:Q6PW52 Ensembl:ENSRNOT00000004658
InParanoid:Q6PW52 Genevestigator:Q6PW52 Uniprot:Q6PW52
Length = 474
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 115/294 (39%), Positives = 175/294 (59%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 64 DVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDR 123
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 124 RLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRL 183
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR-GVEEA-QLPQFTILG 222
T C + LH +P+D +C +E SYGY ++V WK + V G + +L QF+ +G
Sbjct: 184 TIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFVG 243
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
K +G Y +S+ F L R +GYF QTY+P LIV+LSWVSFWIN +A AR
Sbjct: 244 LRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPAR 303
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 304 TSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 357
>ZFIN|ZDB-GENE-091118-65 [details] [associations]
symbol:gabrg2 "gamma-aminobutyric acid (GABA) A
receptor, gamma 2" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 ZFIN:ZDB-GENE-091118-65
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 EMBL:CABZ01068454
EMBL:CABZ01068455 EMBL:CR847531 IPI:IPI00482925
Ensembl:ENSDART00000092821 ArrayExpress:F1RDP2 Bgee:F1RDP2
Uniprot:F1RDP2
Length = 469
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 120/320 (37%), Positives = 187/320 (58%)
Query: 21 QIGNSDSEKLRLCHKKSATTERL--ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTI 78
Q+ + D E + +K T ++ ++VT ++ LL GYD +LRP+ G P + D+ +
Sbjct: 42 QLESDDDE---VTNKTWVLTPKVYESDVTHILNSLLDGYDNKLRPDIGVKPTVIHTDMFV 98
Query: 79 ASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNS 138
S ++ ++M+YTI ++ Q W D RL F+S +VL L+ + KIW+PDTFF N K +
Sbjct: 99 NSIGPVNAINMEYTIDIFFAQTWYDRRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKA 158
Query: 139 FLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDV 198
H +T N+++R+ DG I Y +R T C + L+ +P+D +C +E SYGY ++
Sbjct: 159 DAHWITTPNRMLRIWNDGRILYTLRLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPKEEI 218
Query: 199 VMYWKETPVR-G-VEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQ 256
V WK + V G + +L QF+ +G + +G Y L++ F L R +GYF Q
Sbjct: 219 VYKWKRSSVEVGDIRSWRLYQFSFVGLRNTSEVVRTVSGDYVVLTVFFDLSRRMGYFTIQ 278
Query: 257 TYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIY 316
TY+P LIV+LSWVSFWIN +A AR + R SLP++SYV A+D++
Sbjct: 279 TYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLF 338
Query: 317 LVMCFVFVFAALLEYAAVNY 336
+ +CF+FVFAAL+EY ++Y
Sbjct: 339 VSVCFIFVFAALIEYGTLHY 358
>UNIPROTKB|P22300 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR005437
InterPro:IPR005439 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 KO:K05186 OrthoDB:EOG44BB25 EMBL:M55563
IPI:IPI00687809 IPI:IPI00690304 PIR:B39272 RefSeq:NP_776970.1
UniGene:Bt.408 ProteinModelPortal:P22300 SMR:P22300 STRING:P22300
PRIDE:P22300 GeneID:282240 KEGG:bta:282240 CTD:2566
InParanoid:P22300 BindingDB:P22300 ChEMBL:CHEMBL5138
NextBio:20806059 Uniprot:P22300
Length = 475
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 113/294 (38%), Positives = 173/294 (58%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFGQTWYDR 124
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 125 RLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRL 184
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEEAQLPQFTILG 222
T C + LH +P+D +C +E SYGY ++V WK + V +L QF+ +G
Sbjct: 185 TIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVSDTRSWRLYQFSFVG 244
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
K +G Y +++ F L R +GYF QTY+P LIV+LSWVSFWIN +A AR
Sbjct: 245 LRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPAR 304
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 305 TSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>UNIPROTKB|Q99928 [details] [associations]
symbol:GABRG3 "Gamma-aminobutyric acid receptor subunit
gamma-3" species:9606 "Homo sapiens" [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=NAS;TAS] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_15518 InterPro:IPR005437
InterPro:IPR005440 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PRINTS:PR01623 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0042493 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707 GO:GO:0005254
HOGENOM:HOG000231337 HOVERGEN:HBG051707 KO:K05186 EMBL:S82769
EMBL:AF269144 EMBL:AF269135 EMBL:AF269136 EMBL:AF269137
EMBL:AF269138 EMBL:AF269139 EMBL:AF269140 EMBL:AF269141
EMBL:AF269142 EMBL:AF269143 EMBL:AH009226 IPI:IPI00294459
RefSeq:NP_150092.2 UniGene:Hs.569475 ProteinModelPortal:Q99928
SMR:Q99928 STRING:Q99928 PhosphoSite:Q99928 DMDM:13959689
PRIDE:Q99928 Ensembl:ENST00000333743 GeneID:2567 KEGG:hsa:2567
UCSC:uc001zbf.3 CTD:2567 GeneCards:GC15P027216 H-InvDB:HIX0026811
HGNC:HGNC:4088 MIM:600233 neXtProt:NX_Q99928 PharmGKB:PA28502
eggNOG:NOG300758 InParanoid:Q99928 OMA:RGRIHID PhylomeDB:Q99928
BindingDB:Q99928 ChEMBL:CHEMBL2739 GenomeRNAi:2567 NextBio:10153
ArrayExpress:Q99928 Bgee:Q99928 CleanEx:HS_GABRG3
Genevestigator:Q99928 Uniprot:Q99928
Length = 467
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 119/320 (37%), Positives = 183/320 (57%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTI 78
E + +S S + + KS T+ VT +++LL YD +LRP+ G P + +D+ +
Sbjct: 24 EDEYEDSSSNQKWVLAPKSQDTD----VTLILNKLLREYDKKLRPDIGIKPTVIDVDIYV 79
Query: 79 ASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNS 138
S +S ++M+Y I ++ Q W D RL F+S ++LTL+ + IW+PDT F N K +
Sbjct: 80 NSIGPVSSINMEYQIDIFFAQTWTDSRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTA 139
Query: 139 FLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDV 198
H +T N+L+R+ DG I Y +R T C + LH +P+D +C + SYGY ++
Sbjct: 140 EAHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEM 199
Query: 199 VMYWKETPVRGVEEA--QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQ 256
+ W++ V ++ +L QF +G + G Y +++ F+L R +GYF Q
Sbjct: 200 IYRWRKNSVEAADQKSWRLYQFDFMGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQ 259
Query: 257 TYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIY 316
TY+P IL V+LSWVSFWI +AT AR A R SLPR+SYV A+D++
Sbjct: 260 TYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLF 319
Query: 317 LVMCFVFVFAALLEYAAVNY 336
+ +CF+FVFAAL+EYA +NY
Sbjct: 320 VTVCFLFVFAALMEYATLNY 339
>UNIPROTKB|F1NID8 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 IPI:IPI00577501 EMBL:AADN02035879
Ensembl:ENSGALT00000002621 Uniprot:F1NID8
Length = 438
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 120/321 (37%), Positives = 186/321 (57%)
Query: 20 SQIGNSDSEKLRLCHKKSATTERL--ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLT 77
+Q G+ D E +K T ++ ++VT ++ LL GYD +LRP+ G P + D+
Sbjct: 2 TQKGDDDYEDYT-SNKTWVLTPKVHESDVTLILNGLLEGYDNKLRPDIGVKPTVIHTDMY 60
Query: 78 IASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKN 137
+ S ++ ++M+YTI ++ Q W D RL F+S +VL L+ + KIW+PDTFF N K
Sbjct: 61 VNSIGPVNAINMEYTIDIFFAQTWYDRRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKK 120
Query: 138 SFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLD 197
+ H +T N+++R+ DG + Y +R T C + LH +P+D +C +E SYGY +
Sbjct: 121 ADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDAHSCPLEFSSYGYPREE 180
Query: 198 VVMYWKETPVR-GVEEA-QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVF 255
++ WK + V G + +L QF+ G K +G Y +S+ F L R +GYF
Sbjct: 181 IIYQWKRSSVEVGDTRSWRLYQFSFTGLRNTTEVVKTTSGDYVVMSVYFNLSRRMGYFTI 240
Query: 256 QTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDI 315
QTY+P LIV+LSWVSFWIN +A AR + R SLP++SYV A+D+
Sbjct: 241 QTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDL 300
Query: 316 YLVMCFVFVFAALLEYAAVNY 336
++ +CF+FVF+AL+EY ++Y
Sbjct: 301 FVSVCFIFVFSALVEYGTLHY 321
>UNIPROTKB|F1NVG2 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030534 "adult
behavior" evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 OMA:GFTSQKS
EMBL:AADN02035879 IPI:IPI00820989 Ensembl:ENSGALT00000034794
Uniprot:F1NVG2
Length = 445
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 120/321 (37%), Positives = 186/321 (57%)
Query: 20 SQIGNSDSEKLRLCHKKSATTERL--ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLT 77
+Q G+ D E +K T ++ ++VT ++ LL GYD +LRP+ G P + D+
Sbjct: 17 TQKGDDDYEDYT-SNKTWVLTPKVHESDVTLILNGLLEGYDNKLRPDIGVKPTVIHTDMY 75
Query: 78 IASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKN 137
+ S ++ ++M+YTI ++ Q W D RL F+S +VL L+ + KIW+PDTFF N K
Sbjct: 76 VNSIGPVNAINMEYTIDIFFAQTWYDRRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKK 135
Query: 138 SFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLD 197
+ H +T N+++R+ DG + Y +R T C + LH +P+D +C +E SYGY +
Sbjct: 136 ADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDAHSCPLEFSSYGYPREE 195
Query: 198 VVMYWKETPVR-GVEEA-QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVF 255
++ WK + V G + +L QF+ G K +G Y +S+ F L R +GYF
Sbjct: 196 IIYQWKRSSVEVGDTRSWRLYQFSFTGLRNTTEVVKTTSGDYVVMSVYFNLSRRMGYFTI 255
Query: 256 QTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDI 315
QTY+P LIV+LSWVSFWIN +A AR + R SLP++SYV A+D+
Sbjct: 256 QTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDL 315
Query: 316 YLVMCFVFVFAALLEYAAVNY 336
++ +CF+FVF+AL+EY ++Y
Sbjct: 316 FVSVCFIFVFSALVEYGTLHY 336
>UNIPROTKB|F1MIG7 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0030534 "adult behavior"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0006821
GeneTree:ENSGT00540000070314 IPI:IPI00690304 UniGene:Bt.408
OMA:GFTSQKS EMBL:DAAA02020916 EMBL:DAAA02020917
Ensembl:ENSBTAT00000013543 ArrayExpress:F1MIG7 Uniprot:F1MIG7
Length = 475
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 114/294 (38%), Positives = 175/294 (59%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDR 124
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 125 RLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRL 184
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR-GVEEA-QLPQFTILG 222
T C + LH +P+D +C +E SYGY ++V WK + V G + +L QF+ +G
Sbjct: 185 TIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFVG 244
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
K +G Y +++ F L R +GYF QTY+P LIV+LSWVSFWIN +A AR
Sbjct: 245 LRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPAR 304
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 305 TSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>UNIPROTKB|G3MYR4 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:DAAA02020916 EMBL:DAAA02020917
Ensembl:ENSBTAT00000066231 Uniprot:G3MYR4
Length = 467
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 114/294 (38%), Positives = 175/294 (59%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDR 124
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 125 RLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRL 184
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR-GVEEA-QLPQFTILG 222
T C + LH +P+D +C +E SYGY ++V WK + V G + +L QF+ +G
Sbjct: 185 TIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFVG 244
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
K +G Y +++ F L R +GYF QTY+P LIV+LSWVSFWIN +A AR
Sbjct: 245 LRNTTEVVKTTSGDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPAR 304
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ R SLP++SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 305 TSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHY 358
>RGD|61856 [details] [associations]
symbol:Gabra2 "gamma-aminobutyric acid (GABA) A receptor, alpha 2"
species:10116 "Rattus norvegicus" [GO:0001505 "regulation of
neurotransmitter levels" evidence=ISO] [GO:0004890 "GABA-A receptor
activity" evidence=TAS] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0006836 "neurotransmitter transport"
evidence=ISO] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA;ISO] [GO:0008503 "benzodiazepine receptor
activity" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0032590 "dendrite membrane"
evidence=IDA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0032590 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:L08491 IPI:IPI00950967 PIR:JH0370
UniGene:Rn.48180 ProteinModelPortal:P23576 PhosphoSite:P23576
PRIDE:P23576 UCSC:RGD:61856 InParanoid:P23576 BindingDB:P23576
ChEMBL:CHEMBL341 ArrayExpress:P23576 Genevestigator:P23576
GermOnline:ENSRNOG00000002349 Uniprot:P23576
Length = 451
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 118/294 (40%), Positives = 168/294 (57%)
Query: 47 TQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRL 106
T+ + +LL GYD RLRP G V ++ + SF +S+ M+YTI ++ Q WKD+RL
Sbjct: 43 TRILDRLLDGYDNRLRPGLGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERL 102
Query: 107 AFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTT 166
F +L L+ A KIW PDTFF N K S H++T NKL+R+ DG++ Y MR T
Sbjct: 103 KFKGPMNILRLNNSMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTV 162
Query: 167 TLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA----QLPQFTILG 222
C M L +P+D +C ++ SY YT +V W P V+ A +L Q+ +LG
Sbjct: 163 QAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNPSDSVQVAPDGSRLNQYDLLG 222
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
K +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+N E+ AR
Sbjct: 223 QSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPAR 282
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP+++Y A+D ++ +C+ FVF+AL+E+A VNY
Sbjct: 283 TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 336
>UNIPROTKB|E1C779 [details] [associations]
symbol:GABRG3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR005440
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:RGRIHID EMBL:AC145944
EMBL:AADN02017655 EMBL:AADN02017656 EMBL:AADN02017657
EMBL:AADN02017658 IPI:IPI00811977 ProteinModelPortal:E1C779
Ensembl:ENSGALT00000030259 Uniprot:E1C779
Length = 465
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 113/294 (38%), Positives = 172/294 (58%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+VT +++LL YD +LRP+ G P + +D+ + S +S ++M+Y I ++ Q W D
Sbjct: 46 DVTLILNKLLREYDKKLRPDIGLKPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTDS 105
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S ++LTL+ + IW+PDT F N K + H +T N+L+R+ DG I Y +R
Sbjct: 106 RLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRL 165
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA--QLPQFTILG 222
T C + LH +P+D +C + SYGY +++ W++ V ++ +L QF +G
Sbjct: 166 TINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFMG 225
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ G Y +++ F L R +GYF QTY+P IL V+LSWVSFWI +AT AR
Sbjct: 226 LRNTSEIVNTSAGDYVVMTIYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPAR 285
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
A R SLPR+SYV A+D+++ +CF+FVFAAL+EYA +NY
Sbjct: 286 TALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNY 339
>UNIPROTKB|E2RH22 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 OMA:HYFTSNK
EMBL:AAEX03009032 Ensembl:ENSCAFT00000002978 Uniprot:E2RH22
Length = 468
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 117/320 (36%), Positives = 182/320 (56%)
Query: 21 QIGNSDSEKLRLCHKKSATTERL--ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTI 78
++ + D E L + +K ++ ++TQ ++ LL GYD +LRP+ G P + D+ +
Sbjct: 41 KVDDEDDEDLTV-NKTWVLAPKIHEGDITQILNSLLQGYDNKLRPDIGVRPTVIETDVYV 99
Query: 79 ASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNS 138
S + ++M+YTI + Q W D RL F+S +VL L+ + KIW+PDTFF N + S
Sbjct: 100 NSIGPVDPINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKS 159
Query: 139 FLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDV 198
H +T N+L+R+ DG + Y +R T C + LH +P+D +C +E SYGY ++
Sbjct: 160 DAHWITTPNRLLRIWNDGRVLYTLRLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEI 219
Query: 199 VMYWKETPVRGVEEA--QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQ 256
WK+ V + +L QF +G + +G Y +++ F L R +GYF Q
Sbjct: 220 EYKWKKPSVEVADPKYWRLYQFAFVGLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQ 279
Query: 257 TYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIY 316
TY+P IL V+LSWVSFWIN +A AR + R SLP++SYV A+D++
Sbjct: 280 TYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLF 339
Query: 317 LVMCFVFVFAALLEYAAVNY 336
+ +CF+FVFAAL+EY ++Y
Sbjct: 340 VSVCFIFVFAALMEYGTLHY 359
>UNIPROTKB|F1MCS2 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR001390 InterPro:IPR005433
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00550000074441 IPI:IPI00704308 UniGene:Bt.175
OMA:ASPKTTY EMBL:DAAA02068172 EMBL:DAAA02068173 EMBL:DAAA02068174
Ensembl:ENSBTAT00000008798 Uniprot:F1MCS2
Length = 492
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 121/302 (40%), Positives = 173/302 (57%)
Query: 39 TTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLN 98
+T+ + T+ + +LL GYD RLRP G V D+ + SF +S+ M+YTI ++
Sbjct: 60 STDNITIFTRILDRLLDGYDNRLRPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFR 119
Query: 99 QYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSI 158
Q W D+RL F ++L L+ A KIW PDTFF N K S H++T NKL+RL +G++
Sbjct: 120 QTWHDERLKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTL 179
Query: 159 TYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ---- 214
Y MR T C M L +P+D C ++ SY YT +VV W + VE AQ
Sbjct: 180 LYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSR 239
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
L Q+ +LGH + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+
Sbjct: 240 LNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWL 299
Query: 275 NHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
N E+ AR R+SLP+++Y A+D ++ +C+ FVF+AL+E+A V
Sbjct: 300 NRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATV 359
Query: 335 NY 336
NY
Sbjct: 360 NY 361
>UNIPROTKB|P08219 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005431 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 EMBL:X05717 EMBL:BC114156 IPI:IPI00714377
PIR:A27142 RefSeq:NP_001178048.1 UniGene:Bt.87630
ProteinModelPortal:P08219 PRIDE:P08219 Ensembl:ENSBTAT00000009483
GeneID:780973 KEGG:bta:780973 CTD:2554 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 InParanoid:P08219 OMA:APNIARD OrthoDB:EOG4ZS935
BindingDB:P08219 ChEMBL:CHEMBL3627 NextBio:20924533 Uniprot:P08219
Length = 456
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 121/294 (41%), Positives = 169/294 (57%)
Query: 47 TQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRL 106
T+ + +LL GYD RLRP G V D+ + SF +S+ M+YTI ++ Q WKD+RL
Sbjct: 43 TRILDRLLDGYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERL 102
Query: 107 AFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTT 166
F VL L+ A KIW PDTFF N K S H++T NKL+R+ DG++ Y MR T
Sbjct: 103 KFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTV 162
Query: 167 TLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFTILG 222
C M L +P+D C ++ SY YT +VV W P R V A+ L Q+ +LG
Sbjct: 163 RAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLG 222
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+N E+ AR
Sbjct: 223 QTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPAR 282
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP+++Y A+D ++ +C+ FVF+AL+E+A VNY
Sbjct: 283 TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 336
>UNIPROTKB|P10064 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005433 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:X12362 IPI:IPI00704308 PIR:S12511
RefSeq:NP_776967.1 UniGene:Bt.175 ProteinModelPortal:P10064
GeneID:282237 KEGG:bta:282237 CTD:2556 InParanoid:P10064
OrthoDB:EOG4X0MSC BindingDB:P10064 ChEMBL:CHEMBL3628
NextBio:20806056 Uniprot:P10064
Length = 492
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 121/302 (40%), Positives = 173/302 (57%)
Query: 39 TTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLN 98
+T+ + T+ + +LL GYD RLRP G V D+ + SF +S+ M+YTI ++
Sbjct: 60 STDNITIFTRILDRLLDGYDNRLRPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFR 119
Query: 99 QYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSI 158
Q W D+RL F ++L L+ A KIW PDTFF N K S H++T NKL+RL +G++
Sbjct: 120 QTWHDERLKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTL 179
Query: 159 TYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ---- 214
Y MR T C M L +P+D C ++ SY YT +VV W + VE AQ
Sbjct: 180 LYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSR 239
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
L Q+ +LGH + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+
Sbjct: 240 LNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWL 299
Query: 275 NHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
N E+ AR R+SLP+++Y A+D ++ +C+ FVF+AL+E+A V
Sbjct: 300 NRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATV 359
Query: 335 NY 336
NY
Sbjct: 360 NY 361
>UNIPROTKB|E2QVJ7 [details] [associations]
symbol:GABRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005433 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2556
OMA:ASPKTTY EMBL:AAEX03027059 EMBL:AAEX03027060 RefSeq:XP_549343.1
Ensembl:ENSCAFT00000030424 GeneID:492223 KEGG:cfa:492223
NextBio:20864840 Uniprot:E2QVJ7
Length = 492
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 121/302 (40%), Positives = 173/302 (57%)
Query: 39 TTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLN 98
+T+ + T+ + +LL GYD RLRP G V D+ + SF +S+ M+YTI ++
Sbjct: 60 STDNITIFTRILDRLLDGYDNRLRPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFR 119
Query: 99 QYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSI 158
Q W D+RL F ++L L+ A KIW PDTFF N K S H++T NKL+RL +G++
Sbjct: 120 QTWHDERLKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTL 179
Query: 159 TYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ---- 214
Y MR T C M L +P+D C ++ SY YT +VV W + VE AQ
Sbjct: 180 LYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSR 239
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
L Q+ +LGH + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+
Sbjct: 240 LNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWL 299
Query: 275 NHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
N E+ AR R+SLP+++Y A+D ++ +C+ FVF+AL+E+A V
Sbjct: 300 NRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATV 359
Query: 335 NY 336
NY
Sbjct: 360 NY 361
>UNIPROTKB|E2RSP8 [details] [associations]
symbol:GABRA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 CTD:2554 GeneTree:ENSGT00550000074441
OMA:APNIARD EMBL:AAEX03003042 RefSeq:XP_546261.2
ProteinModelPortal:E2RSP8 Ensembl:ENSCAFT00000027295 GeneID:489143
KEGG:cfa:489143 NextBio:20862355 Uniprot:E2RSP8
Length = 456
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 121/294 (41%), Positives = 169/294 (57%)
Query: 47 TQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRL 106
T+ + +LL GYD RLRP G V D+ + SF +S+ M+YTI ++ Q WKD+RL
Sbjct: 43 TRILDRLLDGYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERL 102
Query: 107 AFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTT 166
F VL L+ A KIW PDTFF N K S H++T NKL+R+ DG++ Y MR T
Sbjct: 103 KFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTV 162
Query: 167 TLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFTILG 222
C M L +P+D C ++ SY YT +VV W P R V A+ L Q+ +LG
Sbjct: 163 RAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLG 222
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+N E+ AR
Sbjct: 223 QTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPAR 282
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP+++Y A+D ++ +C+ FVF+AL+E+A VNY
Sbjct: 283 TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 336
>UNIPROTKB|P14867 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISS] [GO:0008144 "drug binding" evidence=ISS]
[GO:0016917 "GABA receptor activity" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 GO:GO:0005887 EMBL:CH471062 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
DrugBank:DB00962 DrugBank:DB01068 DrugBank:DB01159 DrugBank:DB00842
DrugBank:DB00818 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
DrugBank:DB01189 DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028
DrugBank:DB01236 Orphanet:64280 Orphanet:307 DrugBank:DB00273
GO:GO:0051932 DrugBank:DB00292 DrugBank:DB00466 DrugBank:DB00475
DrugBank:DB00829 DrugBank:DB00241 DrugBank:DB00849 DrugBank:DB00683
DrugBank:DB00349 DrugBank:DB01174 DrugBank:DB00794 DrugBank:DB00898
DrugBank:DB01355 DrugBank:DB00404 DrugBank:DB00425 DrugBank:DB00599
KO:K05175 DrugBank:DB00837 CTD:2554 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 OMA:APNIARD
OrthoDB:EOG4ZS935 EMBL:X14766 EMBL:BC030696 EMBL:X13584
IPI:IPI00295235 PIR:A31588 PIR:A60652 RefSeq:NP_000797.2
RefSeq:NP_001121115.1 RefSeq:NP_001121116.1 RefSeq:NP_001121117.1
RefSeq:NP_001121118.1 RefSeq:NP_001121119.1 RefSeq:NP_001121120.1
UniGene:Hs.175934 ProteinModelPortal:P14867 SMR:P14867
IntAct:P14867 STRING:P14867 PhosphoSite:P14867 DMDM:27808653
PRIDE:P14867 DNASU:2554 Ensembl:ENST00000023897
Ensembl:ENST00000393943 Ensembl:ENST00000420560
Ensembl:ENST00000428797 Ensembl:ENST00000437025
Ensembl:ENST00000444819 GeneID:2554 KEGG:hsa:2554 UCSC:uc003lyx.4
GeneCards:GC05P161206 HGNC:HGNC:4075 HPA:CAB001963 HPA:CAB022502
MIM:137160 MIM:611136 neXtProt:NX_P14867 PharmGKB:PA28489
InParanoid:P14867 PhylomeDB:P14867 BindingDB:P14867
ChEMBL:CHEMBL1962 DrugBank:DB00237 DrugBank:DB01353
DrugBank:DB00628 DrugBank:DB00189 DrugBank:DB01205 DrugBank:DB00690
DrugBank:DB00801 DrugBank:DB00371 DrugBank:DB00463 DrugBank:DB00474
DrugBank:DB01107 DrugBank:DB01595 DrugBank:DB00312 DrugBank:DB01588
DrugBank:DB01589 DrugBank:DB00418 DrugBank:DB00306 DrugBank:DB01154
GenomeRNAi:2554 NextBio:10087 ArrayExpress:P14867 Bgee:P14867
CleanEx:HS_GABRA1 Genevestigator:P14867 GermOnline:ENSG00000022355
Uniprot:P14867
Length = 456
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 121/294 (41%), Positives = 169/294 (57%)
Query: 47 TQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRL 106
T+ + +LL GYD RLRP G V D+ + SF +S+ M+YTI ++ Q WKD+RL
Sbjct: 43 TRILDRLLDGYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERL 102
Query: 107 AFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTT 166
F VL L+ A KIW PDTFF N K S H++T NKL+R+ DG++ Y MR T
Sbjct: 103 KFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTV 162
Query: 167 TLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFTILG 222
C M L +P+D C ++ SY YT +VV W P R V A+ L Q+ +LG
Sbjct: 163 RAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLG 222
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+N E+ AR
Sbjct: 223 QTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPAR 282
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP+++Y A+D ++ +C+ FVF+AL+E+A VNY
Sbjct: 283 TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 336
>UNIPROTKB|P34903 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005433 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186 Orphanet:79102
DrugBank:DB00829 DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404
KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
DrugBank:DB00189 DrugBank:DB00690 DrugBank:DB00371 GO:GO:0008503
CTD:2556 OrthoDB:EOG4X0MSC EMBL:S62908 EMBL:AF166361 EMBL:AF165901
EMBL:AF165902 EMBL:AF165903 EMBL:AF165904 EMBL:AF165905
EMBL:AF165906 EMBL:AF166359 EMBL:AF166360 EMBL:BC028629
IPI:IPI00002897 PIR:I77911 RefSeq:NP_000799.1 UniGene:Hs.123024
ProteinModelPortal:P34903 SMR:P34903 IntAct:P34903
MINT:MINT-7242442 STRING:P34903 PhosphoSite:P34903 DMDM:462149
PRIDE:P34903 DNASU:2556 Ensembl:ENST00000370311
Ensembl:ENST00000370314 Ensembl:ENST00000535043 GeneID:2556
KEGG:hsa:2556 UCSC:uc010ntk.1 GeneCards:GC0XM151334 HGNC:HGNC:4077
HPA:HPA000839 MIM:305660 neXtProt:NX_P34903 PharmGKB:PA28491
InParanoid:P34903 OMA:ASPKTTY PhylomeDB:P34903 BindingDB:P34903
ChEMBL:CHEMBL3026 GenomeRNAi:2556 NextBio:10095 Bgee:P34903
CleanEx:HS_GABRA3 Genevestigator:P34903 GermOnline:ENSG00000011677
Uniprot:P34903
Length = 492
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 121/302 (40%), Positives = 173/302 (57%)
Query: 39 TTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLN 98
+T+ + T+ + +LL GYD RLRP G V D+ + SF +S+ M+YTI ++
Sbjct: 60 STDNITIFTRILDRLLDGYDNRLRPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFR 119
Query: 99 QYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSI 158
Q W D+RL F ++L L+ A KIW PDTFF N K S H++T NKL+RL +G++
Sbjct: 120 QTWHDERLKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTL 179
Query: 159 TYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ---- 214
Y MR T C M L +P+D C ++ SY YT +VV W + VE AQ
Sbjct: 180 LYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSR 239
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
L Q+ +LGH + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+
Sbjct: 240 LNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWL 299
Query: 275 NHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
N E+ AR R+SLP+++Y A+D ++ +C+ FVF+AL+E+A V
Sbjct: 300 NRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATV 359
Query: 335 NY 336
NY
Sbjct: 360 NY 361
>UNIPROTKB|F1RR71 [details] [associations]
symbol:LOC100516706 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 EMBL:CU640458
RefSeq:XP_003134137.3 Ensembl:ENSSSCT00000018538 GeneID:100516706
KEGG:ssc:100516706 OMA:NALAGKX Uniprot:F1RR71
Length = 456
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 121/294 (41%), Positives = 169/294 (57%)
Query: 47 TQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRL 106
T+ + +LL GYD RLRP G V D+ + SF +S+ M+YTI ++ Q WKD+RL
Sbjct: 43 TRILDRLLDGYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERL 102
Query: 107 AFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTT 166
F VL L+ A KIW PDTFF N K S H++T NKL+R+ DG++ Y MR T
Sbjct: 103 KFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTV 162
Query: 167 TLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFTILG 222
C M L +P+D C ++ SY YT +VV W P R V A+ L Q+ +LG
Sbjct: 163 RAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLG 222
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+N E+ AR
Sbjct: 223 QTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPAR 282
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP+++Y A+D ++ +C+ FVF+AL+E+A VNY
Sbjct: 283 TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 336
>MGI|MGI:95613 [details] [associations]
symbol:Gabra1 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0008144 "drug binding"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016917 "GABA receptor
activity" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0051932 "synaptic transmission, GABAergic"
evidence=ISO] InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 MGI:MGI:95613 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 CTD:2554 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 OMA:APNIARD
OrthoDB:EOG4ZS935 EMBL:M86566 EMBL:M63436 EMBL:X61430
IPI:IPI00113772 PIR:A39062 RefSeq:NP_034380.1 UniGene:Mm.439668
ProteinModelPortal:P62812 SMR:P62812 IntAct:P62812 STRING:P62812
PhosphoSite:P62812 PaxDb:P62812 PRIDE:P62812
Ensembl:ENSMUST00000020707 GeneID:14394 KEGG:mmu:14394
InParanoid:P62812 BindingDB:P62812 ChEMBL:CHEMBL3139 NextBio:285923
Bgee:P62812 Genevestigator:P62812 GermOnline:ENSMUSG00000010803
Uniprot:P62812
Length = 455
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 121/294 (41%), Positives = 169/294 (57%)
Query: 47 TQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRL 106
T+ + +LL GYD RLRP G V D+ + SF +S+ M+YTI ++ Q WKD+RL
Sbjct: 42 TRILDRLLDGYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERL 101
Query: 107 AFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTT 166
F VL L+ A KIW PDTFF N K S H++T NKL+R+ DG++ Y MR T
Sbjct: 102 KFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTV 161
Query: 167 TLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFTILG 222
C M L +P+D C ++ SY YT +VV W P R V A+ L Q+ +LG
Sbjct: 162 RAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLG 221
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+N E+ AR
Sbjct: 222 QTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPAR 281
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP+++Y A+D ++ +C+ FVF+AL+E+A VNY
Sbjct: 282 TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 335
>RGD|61855 [details] [associations]
symbol:Gabra1 "gamma-aminobutyric acid (GABA) A receptor, alpha 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=TAS] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=TAS] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IDA] [GO:0006821 "chloride transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] [GO:0008144 "drug binding" evidence=IDA]
[GO:0008503 "benzodiazepine receptor activity" evidence=TAS]
[GO:0016917 "GABA receptor activity" evidence=IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051932 "synaptic transmission, GABAergic" evidence=IDA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
RGD:61855 GO:GO:0005887 GO:GO:0008144 GO:GO:0030054 GO:GO:0045211
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 GO:GO:0051932 KO:K05175 CTD:2554
eggNOG:NOG238757 GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD OrthoDB:EOG4ZS935 EMBL:L08490
EMBL:AY574250 EMBL:BC100061 IPI:IPI00192642 PIR:JQ0158
RefSeq:NP_899155.1 UniGene:Rn.28463 ProteinModelPortal:P62813
SMR:P62813 IntAct:P62813 MINT:MINT-3371441 STRING:P62813
PhosphoSite:P62813 PRIDE:P62813 Ensembl:ENSRNOT00000004725
GeneID:29705 KEGG:rno:29705 UCSC:RGD:61855 InParanoid:P62813
BindingDB:P62813 ChEMBL:CHEMBL343 NextBio:610121
Genevestigator:P62813 GermOnline:ENSRNOG00000003512 GO:GO:0008503
GO:GO:0005237 Uniprot:P62813
Length = 455
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 121/294 (41%), Positives = 169/294 (57%)
Query: 47 TQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRL 106
T+ + +LL GYD RLRP G V D+ + SF +S+ M+YTI ++ Q WKD+RL
Sbjct: 42 TRILDRLLDGYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERL 101
Query: 107 AFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTT 166
F VL L+ A KIW PDTFF N K S H++T NKL+R+ DG++ Y MR T
Sbjct: 102 KFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTV 161
Query: 167 TLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFTILG 222
C M L +P+D C ++ SY YT +VV W P R V A+ L Q+ +LG
Sbjct: 162 RAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLG 221
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+N E+ AR
Sbjct: 222 QTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPAR 281
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP+++Y A+D ++ +C+ FVF+AL+E+A VNY
Sbjct: 282 TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 335
>UNIPROTKB|P19150 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 KO:K05175 CTD:2554 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD OrthoDB:EOG4ZS935 EMBL:X54244
IPI:IPI00582648 PIR:A60033 RefSeq:NP_989649.1 UniGene:Gga.17167
ProteinModelPortal:P19150 Ensembl:ENSGALT00000002609 GeneID:374214
KEGG:gga:374214 InParanoid:P19150 NextBio:20813718 Uniprot:P19150
Length = 455
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 121/294 (41%), Positives = 169/294 (57%)
Query: 47 TQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRL 106
T+ + +LL GYD RLRP G V D+ + SF +S+ M+YTI ++ Q WKD+RL
Sbjct: 43 TRILDRLLDGYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERL 102
Query: 107 AFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTT 166
F VL L+ A KIW PDTFF N K S H++T NKL+R+ DG++ Y MR T
Sbjct: 103 KFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTV 162
Query: 167 TLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFTILG 222
C M L +P+D C ++ SY YT +VV W P R V A+ L Q+ +LG
Sbjct: 163 RAECPMHLEDFPMDVHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLG 222
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+N E+ AR
Sbjct: 223 QTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPAR 282
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP+++Y A+D ++ +C+ FVF+AL+E+A VNY
Sbjct: 283 TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 336
>UNIPROTKB|Q8N1C3 [details] [associations]
symbol:GABRG1 "Gamma-aminobutyric acid receptor subunit
gamma-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0043235 "receptor complex" evidence=IEA] [GO:0050811 "GABA
receptor binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 EMBL:CH471069 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 EMBL:AK122845 EMBL:CR933628
EMBL:BC031087 IPI:IPI00166138 RefSeq:NP_775807.2 UniGene:Hs.375051
ProteinModelPortal:Q8N1C3 SMR:Q8N1C3 STRING:Q8N1C3
PhosphoSite:Q8N1C3 DMDM:209572630 PRIDE:Q8N1C3 DNASU:2565
Ensembl:ENST00000295452 GeneID:2565 KEGG:hsa:2565 UCSC:uc003gxb.3
CTD:2565 GeneCards:GC04M045953 HGNC:HGNC:4086 HPA:HPA035622
MIM:137166 neXtProt:NX_Q8N1C3 PharmGKB:PA28500 InParanoid:Q8N1C3
KO:K05186 OMA:HYFTSNK OrthoDB:EOG44BB25 PhylomeDB:Q8N1C3
BindingDB:Q8N1C3 ChEMBL:CHEMBL4044 GenomeRNAi:2565 NextBio:10141
ArrayExpress:Q8N1C3 Bgee:Q8N1C3 CleanEx:HS_GABRG1
Genevestigator:Q8N1C3 GermOnline:ENSG00000163285 Uniprot:Q8N1C3
Length = 465
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 113/294 (38%), Positives = 171/294 (58%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
++TQ ++ LL GYD +LRP+ G P + D+ + S + ++M+YTI + Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGVRPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFDS 122
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S +VL L+ + KIW+PDTFF N + S H +T N+L+R+ DG + Y +R
Sbjct: 123 RLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLRL 182
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA--QLPQFTILG 222
T C + LH +P+D +C +E SYGY ++ WK+ V + +L QF +G
Sbjct: 183 TINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFVG 242
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ +G Y +++ F L R +GYF QTY+P IL V+LSWVSFWIN +A AR
Sbjct: 243 LRNSTEITHTISGDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPAR 302
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ R SLP++SYV A+D+++ +CF+FVFAAL+EY ++Y
Sbjct: 303 TSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHY 356
>MGI|MGI:103156 [details] [associations]
symbol:Gabrg1 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IDA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0043235
"receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050811 "GABA receptor binding" evidence=ISO]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
MGI:MGI:103156 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 EMBL:CH466524 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GeneTree:ENSGT00540000070314 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:X55272 EMBL:AK034332
EMBL:AK047752 EMBL:AK049956 EMBL:AK038468 EMBL:AC068252
EMBL:AC092716 EMBL:BC099939 IPI:IPI00308300 IPI:IPI00387194
RefSeq:NP_034382.2 UniGene:Mm.255292 ProteinModelPortal:Q9R0Y8
STRING:Q9R0Y8 PhosphoSite:Q9R0Y8 PRIDE:Q9R0Y8
Ensembl:ENSMUST00000031119 GeneID:14405 KEGG:mmu:14405
BindingDB:Q9R0Y8 ChEMBL:CHEMBL2891 NextBio:285967
Genevestigator:Q9R0Y8 GermOnline:ENSMUSG00000001260 Uniprot:Q9R0Y8
Length = 465
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 113/294 (38%), Positives = 171/294 (58%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
++TQ ++ LL GYD +LRP+ G P + D+ + S + ++M+YTI + Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGVRPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFDS 122
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S +VL L+ + KIW+PDTFF N + S H +T N+L+R+ DG + Y +R
Sbjct: 123 RLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLRL 182
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA--QLPQFTILG 222
T C + LH +P+D +C +E SYGY ++ WK+ V + +L QF +G
Sbjct: 183 TINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFVG 242
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ +G Y +++ F L R +GYF QTY+P IL V+LSWVSFWIN +A AR
Sbjct: 243 LRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPAR 302
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ R SLP++SYV A+D+++ +CF+FVFAAL+EY ++Y
Sbjct: 303 TSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHY 356
>RGD|621732 [details] [associations]
symbol:Gabrg1 "gamma-aminobutyric acid (GABA) A receptor, gamma
1" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA;ISO]
[GO:0016020 "membrane" evidence=IDA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0043235 "receptor complex" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050811 "GABA receptor
binding" evidence=IPI] InterPro:IPR005437 InterPro:IPR005438
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621
PROSITE:PS00236 RGD:621732 GO:GO:0005886 GO:GO:0016020
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0043235
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GeneTree:ENSGT00540000070314 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:X57514 IPI:IPI00211960
PIR:S12056 RefSeq:NP_542153.1 UniGene:Rn.10366
ProteinModelPortal:P23574 STRING:P23574 PRIDE:P23574
Ensembl:ENSRNOT00000003240 GeneID:140674 KEGG:rno:140674
UCSC:RGD:621732 InParanoid:P23574 BindingDB:P23574 ChEMBL:CHEMBL296
NextBio:620667 Genevestigator:P23574 GermOnline:ENSRNOG00000002360
Uniprot:P23574
Length = 465
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 113/294 (38%), Positives = 171/294 (58%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
++TQ ++ LL GYD +LRP+ G P + D+ + S + ++M+YTI + Q W D
Sbjct: 63 DITQILNSLLQGYDNKLRPDIGVRPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFDS 122
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S +VL L+ + KIW+PDTFF N + S H +T N+L+R+ DG + Y +R
Sbjct: 123 RLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLRL 182
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA--QLPQFTILG 222
T C + LH +P+D +C +E SYGY ++ WK+ V + +L QF +G
Sbjct: 183 TINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFVG 242
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ +G Y +++ F L R +GYF QTY+P IL V+LSWVSFWIN +A AR
Sbjct: 243 LRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPAR 302
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ R SLP++SYV A+D+++ +CF+FVFAAL+EY ++Y
Sbjct: 303 TSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHY 356
>WB|WBGene00006784 [details] [associations]
symbol:unc-49 species:6239 "Caenorhabditis elegans"
[GO:0045211 "postsynaptic membrane" evidence=IEA;IDA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0043058 "regulation of backward locomotion" evidence=IMP]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IMP] [GO:0031594 "neuromuscular junction" evidence=IDA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0031594
GO:GO:0007626 GO:GO:0043058 GeneTree:ENSGT00630000089685
EMBL:Z50016 UniGene:Cel.18075 GeneID:176472 KEGG:cel:CELE_T21C12.1
CTD:176472 NextBio:892718 UCSC:T21C12.1b RefSeq:NP_001022781.2
ProteinModelPortal:Q22637 SMR:Q22637 PRIDE:Q22637
EnsemblMetazoa:T21C12.1a WormBase:T21C12.1a InParanoid:Q22637
ArrayExpress:Q22637 Uniprot:Q22637
Length = 1095
Score = 527 (190.6 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 102/243 (41%), Positives = 147/243 (60%)
Query: 106 LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFT 165
L S E + LT+ D+ +++W PDTFF N+K SF H T N +R+ GDG++ R T
Sbjct: 103 LGLSKEIDSLTVGVDYLDRLWKPDTFFPNEKKSFFHLATTHNSFLRIEGDGTVYTSQRLT 162
Query: 166 TTLACMMDLHYYPLDNQNCTVEIESY------------GYTVLDVVMYWKETPVRGVEEA 213
T C MDL +P+D+Q+C +EIES GY++LD++ E E
Sbjct: 163 VTATCPMDLKLFPMDSQHCKLEIESCKSLCSPDIFSPNGYSILDIMYVSHEKKSVSTESY 222
Query: 214 QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFW 273
+LPQF + + + +KL++G Y RL F +RNIG+++ Q YLPS+LIV++SWVSFW
Sbjct: 223 ELPQFVLQSIKVVNHTQKLSSGEYSRLCWFFLFKRNIGFYIIQIYLPSVLIVVISWVSFW 282
Query: 274 INHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAA 333
++ +AT ARVA SS+P++SYVK+IDI+L +CF+ VF +LLEYAA
Sbjct: 283 LSRDATPARVALGVTTVLTMTTLMTMTNSSMPKVSYVKSIDIFLGVCFMMVFCSLLEYAA 342
Query: 334 VNY 336
V Y
Sbjct: 343 VGY 345
Score = 342 (125.4 bits), Expect = 4.3e-59, Sum P(2) = 4.3e-59
Identities = 66/158 (41%), Positives = 99/158 (62%)
Query: 40 TERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQ 99
T+ L++V ++ YD RLRP +G P+ VG+ + ++S ++SEV MD+T+ Y+ Q
Sbjct: 31 TQLLSSVLDRLTNRTT-YDKRLRPRYGEKPVDVGITIHVSSISAVSEVDMDFTLDFYMRQ 89
Query: 100 YWKDDRLAFSSED-----EV--LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
W+D RLAF S D E+ LT+ D+ +++W PDTFF N+K SF H T N +R+
Sbjct: 90 TWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDRLWKPDTFFPNEKKSFFHLATTHNSFLRI 149
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIES 190
GDG++ R T T C MDL +P+D+Q+C +EIES
Sbjct: 150 EGDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIES 187
Score = 306 (112.8 bits), Expect = 4.3e-59, Sum P(2) = 4.3e-59
Identities = 65/162 (40%), Positives = 91/162 (56%)
Query: 181 NQNCTVEIESYGYTVLDVVMYW--KETP--VRGV--EEAQLPQFTILGHETNDRKEKLAT 234
N +V + GY D+ YW K T + V + QLPQF + N K + ++
Sbjct: 441 NSQASVFLYQNGYETKDIDYYWGKKRTDLEITAVKFDTFQLPQFQPTLYFVNTTKAETSS 500
Query: 235 GTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXX 294
G Y RL+L L RN+G++ +PSILIV +SWVSFW+N EA+ ARV
Sbjct: 501 GKYVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMT 560
Query: 295 XXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+S+P++SYVK +D++L CFV VFA+LLEYA V+Y
Sbjct: 561 TLITTTNNSMPKVSYVKGLDVFLNFCFVMVFASLLEYAIVSY 602
Score = 230 (86.0 bits), Expect = 4.3e-51, Sum P(2) = 4.3e-51
Identities = 48/155 (30%), Positives = 77/155 (49%)
Query: 190 SYGYTVLDVVMYW---KE----TPVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSL 242
+Y Y+ ++ W KE T V+ +L + ++GTY RL +
Sbjct: 834 TYAYSTAEIEYKWCTSKEPNCSTAVKADANIELSSYKFTKICQKRTLASTSSGTYSRLRV 893
Query: 243 SFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRS 302
SF R+ G++ Q + P+ L+V+LSW+SFWIN ++ +R
Sbjct: 894 SFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSAPSRTLIGTMTVLTETHLMTGTNR 953
Query: 303 SLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
LP ++YVKA+D++L C++ V AL+EYA V YS
Sbjct: 954 RLPPVAYVKAVDVFLGFCYLLVILALIEYACVAYS 988
>UNIPROTKB|F6Q4V7 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:HYFTSNK EMBL:DAAA02017594
EMBL:DAAA02017595 EMBL:DAAA02017596 EMBL:DAAA02017597
IPI:IPI00715159 Ensembl:ENSBTAT00000016309 Uniprot:F6Q4V7
Length = 354
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 113/294 (38%), Positives = 170/294 (57%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
++TQ ++ LL GYD +LRP+ G P + D+ + S + ++M+YTI + Q W D
Sbjct: 40 DITQILNSLLQGYDNKLRPDIGVRPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFDS 99
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S +VL L+ + KIW+PDTFF N + S H +T N+L+R+ DG + Y +R
Sbjct: 100 RLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLRL 159
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA--QLPQFTILG 222
T C + LH +P+D +C +E SYGY ++ WK+ V + +L QF +G
Sbjct: 160 TINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFVG 219
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+G Y +++ F L R +GYF QTY+P IL V+LSWVSFWIN +A AR
Sbjct: 220 LRNTTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPAR 279
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ R SLP++SYV A+D+++ +CF+FVFAAL+EY ++Y
Sbjct: 280 TSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHY 333
>UNIPROTKB|F1S3S9 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:HYFTSNK EMBL:CU856397
EMBL:FP312872 Ensembl:ENSSSCT00000009639 Uniprot:F1S3S9
Length = 442
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 113/294 (38%), Positives = 170/294 (57%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
++TQ ++ LL GYD +LRP+ G P + D+ + S + ++M+YTI + Q W D
Sbjct: 40 DITQILNSLLQGYDNKLRPDIGVRPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFDS 99
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S +VL L+ + KIW+PDTFF N + S H +T N+L+R+ DG + Y +R
Sbjct: 100 RLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLRL 159
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA--QLPQFTILG 222
T C + LH +P+D +C +E SYGY ++ WK+ V + +L QF +G
Sbjct: 160 TINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFVG 219
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+G Y +++ F L R +GYF QTY+P IL V+LSWVSFWIN +A AR
Sbjct: 220 LRNTTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPAR 279
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ R SLP++SYV A+D+++ +CF+FVFAAL+EY ++Y
Sbjct: 280 TSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHY 333
>ZFIN|ZDB-GENE-050417-360 [details] [associations]
symbol:zgc:110204 "zgc:110204" species:7955 "Danio
rerio" [GO:0005216 "ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-050417-360
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4MPHQ4 EMBL:BC092794 IPI:IPI00512589
RefSeq:NP_001017822.1 UniGene:Dr.116107 UniGene:Dr.150874
ProteinModelPortal:Q568M9 SMR:Q568M9 GeneID:550520 KEGG:dre:550520
NextBio:20879762 Uniprot:Q568M9
Length = 557
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 116/296 (39%), Positives = 171/296 (57%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + +LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDRLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDR 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T N+L R+ +G+I Y MR
Sbjct: 107 RLRYEGPVEILRLNNLMVTKVWTPDTFFRNGKRSVAHNMTAPNRLFRIMKNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE----EAQLPQFTI 220
T + C M L +P+D +C ++ SY Y +++ W + P VE + L Q+ +
Sbjct: 167 TISAECPMRLVNFPMDGHSCPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETVKSITGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 342
>ZFIN|ZDB-GENE-081104-30 [details] [associations]
symbol:gabra5 "gamma-aminobutyric acid (GABA) A
receptor, alpha 5" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-081104-30
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00550000074441 EMBL:CR405707 IPI:IPI00863519
ProteinModelPortal:F1QZ29 Ensembl:ENSDART00000104135 Uniprot:F1QZ29
Length = 491
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 117/306 (38%), Positives = 173/306 (56%)
Query: 35 KKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTIT 94
K+S + + T+ + LL GYD RLRP G + ++ + SF +S+ M+YTI
Sbjct: 76 KESELNDNITVFTRILDGLLDGYDNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTID 135
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
++ Q WKD+RL F E+L L+ A IW PDTFF N K S H++T NKL+RL
Sbjct: 136 VFFRQSWKDERLCFKGPMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKD 195
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV---E 211
DG++ Y MR T + C M L +P+D C ++ SY Y + +VV W + P + V E
Sbjct: 196 DGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPISEVVYKWTKGPGKSVVVAE 255
Query: 212 E-AQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E ++L Q+ ++GH + G Y + F L+R IGYFV QTY+P + V+LS V
Sbjct: 256 EGSRLNQYHLIGHTAGTEDISTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQV 315
Query: 271 SFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFW+N E+ AR R+SLP+++Y A+D ++ +C+ FVF+AL+E
Sbjct: 316 SFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIE 375
Query: 331 YAAVNY 336
+A VNY
Sbjct: 376 FATVNY 381
>MGI|MGI:95615 [details] [associations]
symbol:Gabra3 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 3" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005433
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616
PROSITE:PS00236 MGI:MGI:95615 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 CTD:2556 OrthoDB:EOG4X0MSC EMBL:M86568
IPI:IPI00110601 RefSeq:NP_032093.3 UniGene:Mm.102286
UniGene:Mm.447666 ProteinModelPortal:P26049 SMR:P26049
STRING:P26049 PhosphoSite:P26049 PaxDb:P26049 PRIDE:P26049
Ensembl:ENSMUST00000055966 GeneID:14396 KEGG:mmu:14396
InParanoid:P26049 BindingDB:P26049 ChEMBL:CHEMBL3387 NextBio:285931
Bgee:P26049 Genevestigator:P26049 GermOnline:ENSMUSG00000031343
Uniprot:P26049
Length = 492
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 120/302 (39%), Positives = 173/302 (57%)
Query: 39 TTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLN 98
+T+ + T+ + +LL GYD RLRP G V D+ + SF +S+ M+YTI ++
Sbjct: 60 STDNITIFTRILDRLLDGYDNRLRPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFR 119
Query: 99 QYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSI 158
Q W D+RL F ++L L+ A KIW PDTFF N K S H++T NKL+RL +G++
Sbjct: 120 QTWHDERLKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTL 179
Query: 159 TYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ---- 214
Y MR T C M L +P+D C ++ SY YT +V+ W + VE AQ
Sbjct: 180 LYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTKAEVIYSWTLGKNKSVEVAQDGSR 239
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
L Q+ +LGH + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+
Sbjct: 240 LNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWL 299
Query: 275 NHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
N E+ AR R+SLP+++Y A+D ++ +C+ FVF+AL+E+A V
Sbjct: 300 NRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATV 359
Query: 335 NY 336
NY
Sbjct: 360 NY 361
>MGI|MGI:95624 [details] [associations]
symbol:Gabrg3 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 3" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0042493 "response to drug" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005440 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623 PROSITE:PS00236
MGI:MGI:95624 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 KO:K05186 CTD:2567 eggNOG:NOG300758
OMA:RGRIHID EMBL:X59300 EMBL:AC102098 EMBL:AC102129 EMBL:AC116146
EMBL:AC134844 EMBL:AC156610 EMBL:AC158550 EMBL:CH466599
IPI:IPI00118860 PIR:S16915 RefSeq:NP_032100.2 UniGene:Mm.434343
ProteinModelPortal:P27681 STRING:P27681 PhosphoSite:P27681
PRIDE:P27681 Ensembl:ENSMUST00000068911 GeneID:14407 KEGG:mmu:14407
UCSC:uc009hdz.1 InParanoid:P27681 BindingDB:P27681
ChEMBL:CHEMBL4236 NextBio:285977 Genevestigator:P27681
GermOnline:ENSMUSG00000055026 Uniprot:P27681
Length = 467
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 118/320 (36%), Positives = 181/320 (56%)
Query: 19 ESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTI 78
E + +S S + + KS T+ VT +++LL YD +LRP+ G P + +D+ +
Sbjct: 24 EDENEDSPSNQKWVLAPKSQDTD----VTLILNKLLREYDKKLRPDIGIKPTVIDVDIYV 79
Query: 79 ASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNS 138
S +S ++M+Y I ++ Q W D RL F+S ++LTL+ + IW+PDT F N K +
Sbjct: 80 NSIGPVSSINMEYQIDIFFAQTWTDSRLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTA 139
Query: 139 FLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDV 198
H +T N+L+R+ DG I Y +R T C + LH +P+D C + SYGY ++
Sbjct: 140 EAHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMDAHACPLTFSSYGYPKEEM 199
Query: 199 VMYWKETPVRGVEEA--QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQ 256
+ W++ V ++ +L QF +G + G Y +++ F+L R +GYF Q
Sbjct: 200 IYRWRKNSVEAADQKSWRLYQFDFMGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQ 259
Query: 257 TYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIY 316
TY+P IL V+LSWVSFWI +AT AR R SLPR+SYV A+D++
Sbjct: 260 TYIPCILTVVLSWVSFWIKKDATPARTTLGITTVLTMTTLSTIARKSLPRVSYVTAMDLF 319
Query: 317 LVMCFVFVFAALLEYAAVNY 336
+ +CF+FVFAAL+EYA +NY
Sbjct: 320 VTVCFLFVFAALMEYATLNY 339
>RGD|2648 [details] [associations]
symbol:Gabra3 "gamma-aminobutyric acid (GABA) A receptor, alpha 3"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA;TAS] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=IMP] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005433 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079
PRINTS:PR01616 PROSITE:PS00236 RGD:2648 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707 GO:GO:0005254
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4X0MSC EMBL:L08492 EMBL:X51991 IPI:IPI00197343 PIR:A34130
UniGene:Rn.10367 ProteinModelPortal:P20236 IntAct:P20236
STRING:P20236 PRIDE:P20236 InParanoid:P20236 BindingDB:P20236
ChEMBL:CHEMBL328 NextBio:604953 ArrayExpress:P20236
Genevestigator:P20236 Uniprot:P20236
Length = 493
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 120/302 (39%), Positives = 173/302 (57%)
Query: 39 TTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLN 98
+T+ + T+ + +LL GYD RLRP G V D+ + SF +S+ M+YTI ++
Sbjct: 60 STDNITIFTRILDRLLDGYDNRLRPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFR 119
Query: 99 QYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSI 158
Q W D+RL F ++L L+ A KIW PDTFF N K S H++T NKL+RL +G++
Sbjct: 120 QTWHDERLKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTL 179
Query: 159 TYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ---- 214
Y MR T C M L +P+D C ++ SY YT +V+ W + VE AQ
Sbjct: 180 LYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTKAEVIYSWTLGKNKSVEVAQDGSR 239
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
L Q+ +LGH + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+
Sbjct: 240 LNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWL 299
Query: 275 NHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
N E+ AR R+SLP+++Y A+D ++ +C+ FVF+AL+E+A V
Sbjct: 300 NRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATV 359
Query: 335 NY 336
NY
Sbjct: 360 NY 361
>UNIPROTKB|P20236 [details] [associations]
symbol:Gabra3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:10116 "Rattus norvegicus" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005433 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236
RGD:2648 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC EMBL:L08492 EMBL:X51991
IPI:IPI00197343 PIR:A34130 UniGene:Rn.10367
ProteinModelPortal:P20236 IntAct:P20236 STRING:P20236 PRIDE:P20236
InParanoid:P20236 BindingDB:P20236 ChEMBL:CHEMBL328 NextBio:604953
ArrayExpress:P20236 Genevestigator:P20236 Uniprot:P20236
Length = 493
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 120/302 (39%), Positives = 173/302 (57%)
Query: 39 TTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLN 98
+T+ + T+ + +LL GYD RLRP G V D+ + SF +S+ M+YTI ++
Sbjct: 60 STDNITIFTRILDRLLDGYDNRLRPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFR 119
Query: 99 QYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSI 158
Q W D+RL F ++L L+ A KIW PDTFF N K S H++T NKL+RL +G++
Sbjct: 120 QTWHDERLKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTL 179
Query: 159 TYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ---- 214
Y MR T C M L +P+D C ++ SY YT +V+ W + VE AQ
Sbjct: 180 LYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTKAEVIYSWTLGKNKSVEVAQDGSR 239
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
L Q+ +LGH + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+
Sbjct: 240 LNQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWL 299
Query: 275 NHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
N E+ AR R+SLP+++Y A+D ++ +C+ FVF+AL+E+A V
Sbjct: 300 NRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATV 359
Query: 335 NY 336
NY
Sbjct: 360 NY 361
>MGI|MGI:95616 [details] [associations]
symbol:Gabra4 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 4" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:2001023 "regulation of response to
drug" evidence=IMP] InterPro:IPR001390 InterPro:IPR005434
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617
PROSITE:PS00236 MGI:MGI:95616 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007417 GO:GO:0034707
GO:GO:0005254 CTD:2557 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:THANLNM OrthoDB:EOG4MPHQ4 GO:GO:2001023
EMBL:AK013727 IPI:IPI00109065 RefSeq:NP_034381.1 UniGene:Mm.248731
ProteinModelPortal:Q9D6F4 SMR:Q9D6F4 STRING:Q9D6F4
PhosphoSite:Q9D6F4 PRIDE:Q9D6F4 Ensembl:ENSMUST00000031121
GeneID:14397 KEGG:mmu:14397 InParanoid:Q9D6F4 BindingDB:Q9D6F4
ChEMBL:CHEMBL4182 NextBio:285935 Bgee:Q9D6F4 Genevestigator:Q9D6F4
Uniprot:Q9D6F4
Length = 552
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 119/307 (38%), Positives = 176/307 (57%)
Query: 36 KSATTERLA--NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTI 93
+++ E+L N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+
Sbjct: 36 QNSKDEKLCPENFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTM 95
Query: 94 TMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
++ Q W D RL + E+L L+ K+W PDTFF N K S H++T NKL R+
Sbjct: 96 DVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIM 155
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE-- 211
+G+I Y MR T + C M L +P+D C ++ SY Y +++ W + P + VE
Sbjct: 156 RNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVP 215
Query: 212 --EAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
+ L Q+ ++G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS
Sbjct: 216 KESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQ 275
Query: 270 VSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN E+ AR R SLP++SY A+D ++ +CF FVF+AL+
Sbjct: 276 VSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
Query: 330 EYAAVNY 336
E+AAVNY
Sbjct: 336 EFAAVNY 342
>RGD|621670 [details] [associations]
symbol:Gabra4 "gamma-aminobutyric acid (GABA) A receptor, alpha
4" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;TAS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:2001023 "regulation of response to drug" evidence=IEA;ISO]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
RGD:621670 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 RefSeq:NP_542154.3 UniGene:Rn.81205 GeneID:140675
KEGG:rno:140675 CTD:2557 KO:K05175 eggNOG:NOG238757
HOVERGEN:HBG051707 EMBL:L08493 EMBL:S55933 IPI:IPI00200808
PIR:S17551 ProteinModelPortal:P28471 SMR:P28471 STRING:P28471
PhosphoSite:P28471 PRIDE:P28471 UCSC:RGD:621670 BindingDB:P28471
ChEMBL:CHEMBL292 NextBio:620671 Genevestigator:P28471
Uniprot:P28471
Length = 552
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 119/307 (38%), Positives = 176/307 (57%)
Query: 36 KSATTERLA--NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTI 93
+++ E+L N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+
Sbjct: 36 QNSKDEKLCPENFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTM 95
Query: 94 TMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
++ Q W D RL + E+L L+ K+W PDTFF N K S H++T NKL R+
Sbjct: 96 DVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIM 155
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE-- 211
+G+I Y MR T + C M L +P+D C ++ SY Y +++ W + P + VE
Sbjct: 156 RNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVP 215
Query: 212 --EAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
+ L Q+ ++G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS
Sbjct: 216 KESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQ 275
Query: 270 VSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN E+ AR R SLP++SY A+D ++ +CF FVF+AL+
Sbjct: 276 VSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
Query: 330 EYAAVNY 336
E+AAVNY
Sbjct: 336 EFAAVNY 342
>RGD|621735 [details] [associations]
symbol:Gabrg3 "gamma-aminobutyric acid (GABA) A receptor, gamma
3" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA;TAS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0042493 "response to drug" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005440 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623 PROSITE:PS00236
RGD:621735 GO:GO:0005886 GO:GO:0042493 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 KO:K05186 CTD:2567 eggNOG:NOG300758
OMA:RGRIHID EMBL:M81142 EMBL:X63324 IPI:IPI00200810 PIR:S19317
RefSeq:NP_077346.3 UniGene:Rn.10369 ProteinModelPortal:P28473
SMR:P28473 Ensembl:ENSRNOT00000019971 GeneID:79211 KEGG:rno:79211
UCSC:RGD:621735 InParanoid:P28473 BindingDB:P28473 ChEMBL:CHEMBL336
NextBio:614604 ArrayExpress:P28473 Genevestigator:P28473
GermOnline:ENSRNOG00000014862 Uniprot:P28473
Length = 467
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 112/294 (38%), Positives = 171/294 (58%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+VT +++LL YD +LRP+ G P + +D+ + S +S ++M+Y I ++ Q W D
Sbjct: 46 DVTLILNKLLREYDKKLRPDIGIKPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQTWTDS 105
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S ++LTL+ + IW+PDT F N K + H +T N+L+R+ DG I Y +R
Sbjct: 106 RLRFNSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRL 165
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA--QLPQFTILG 222
T C + LH +P+D C + SYGY +++ W++ V ++ +L QF +G
Sbjct: 166 TINAECQLQLHNFPMDAHACPLTFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDFMG 225
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ G Y +++ F+L R +GYF QTY+P IL V+LSWVSFWI +AT AR
Sbjct: 226 LRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPAR 285
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R SLPR+SYV A+D+++ +CF+FVFAAL+EYA +NY
Sbjct: 286 TTLGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNY 339
>UNIPROTKB|F1LMU7 [details] [associations]
symbol:Gabra2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0001505 GO:GO:0006821 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:0008503 CTD:2555 IPI:IPI00950967
UniGene:Rn.48180 RefSeq:NP_001129251.1 ProteinModelPortal:F1LMU7
PRIDE:F1LMU7 Ensembl:ENSRNOT00000064779 GeneID:289606
KEGG:rno:289606 NextBio:630056 ArrayExpress:F1LMU7 Uniprot:F1LMU7
Length = 452
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 117/294 (39%), Positives = 167/294 (56%)
Query: 47 TQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRL 106
T+ + +LL GYD RLRP G V ++ + SF +S+ M+YTI ++ Q WKD+RL
Sbjct: 43 TRILDRLLDGYDNRLRPGLGDSITEVSTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERL 102
Query: 107 AFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTT 166
F +L L+ A KIW PDTFF N K S H++T NKL+R+ DG++ Y MR T
Sbjct: 103 KFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTV 162
Query: 167 TLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA----QLPQFTILG 222
C M L +P+D +C ++ SY YT +V W V+ A +L Q+ +LG
Sbjct: 163 QAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGSRLNQYDLLG 222
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
K +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+N E+ AR
Sbjct: 223 QSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPAR 282
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP+++Y A+D ++ +C+ FVF+AL+E+A VNY
Sbjct: 283 TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 336
>UNIPROTKB|F1LNE8 [details] [associations]
symbol:Gabra2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:TTAEPNK
IPI:IPI00679252 PRIDE:F1LNE8 Ensembl:ENSRNOT00000003197
ArrayExpress:F1LNE8 Uniprot:F1LNE8
Length = 451
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 117/294 (39%), Positives = 167/294 (56%)
Query: 47 TQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRL 106
T+ + +LL GYD RLRP G V ++ + SF +S+ M+YTI ++ Q WKD+RL
Sbjct: 43 TRILDRLLDGYDNRLRPGLGDSITEVSTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERL 102
Query: 107 AFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTT 166
F +L L+ A KIW PDTFF N K S H++T NKL+R+ DG++ Y MR T
Sbjct: 103 KFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTV 162
Query: 167 TLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA----QLPQFTILG 222
C M L +P+D +C ++ SY YT +V W V+ A +L Q+ +LG
Sbjct: 163 QAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGSRLNQYDLLG 222
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
K +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+N E+ AR
Sbjct: 223 QSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPAR 282
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP+++Y A+D ++ +C+ FVF+AL+E+A VNY
Sbjct: 283 TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 336
>UNIPROTKB|P28471 [details] [associations]
symbol:Gabra4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:10116 "Rattus norvegicus" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
RGD:621670 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 RefSeq:NP_542154.3 UniGene:Rn.81205 GeneID:140675
KEGG:rno:140675 CTD:2557 KO:K05175 eggNOG:NOG238757
HOVERGEN:HBG051707 EMBL:L08493 EMBL:S55933 IPI:IPI00200808
PIR:S17551 ProteinModelPortal:P28471 SMR:P28471 STRING:P28471
PhosphoSite:P28471 PRIDE:P28471 UCSC:RGD:621670 BindingDB:P28471
ChEMBL:CHEMBL292 NextBio:620671 Genevestigator:P28471
Uniprot:P28471
Length = 552
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 119/307 (38%), Positives = 176/307 (57%)
Query: 36 KSATTERLA--NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTI 93
+++ E+L N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+
Sbjct: 36 QNSKDEKLCPENFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTM 95
Query: 94 TMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
++ Q W D RL + E+L L+ K+W PDTFF N K S H++T NKL R+
Sbjct: 96 DVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIM 155
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE-- 211
+G+I Y MR T + C M L +P+D C ++ SY Y +++ W + P + VE
Sbjct: 156 RNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVP 215
Query: 212 --EAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
+ L Q+ ++G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS
Sbjct: 216 KESSSLVQYDLIGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQ 275
Query: 270 VSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
VSFWIN E+ AR R SLP++SY A+D ++ +CF FVF+AL+
Sbjct: 276 VSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALI 335
Query: 330 EYAAVNY 336
E+AAVNY
Sbjct: 336 EFAAVNY 342
>UNIPROTKB|F1NAX6 [details] [associations]
symbol:GABRA3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
OMA:ASPKTTY EMBL:AADN02013489 IPI:IPI00583603
Ensembl:ENSGALT00000011779 Uniprot:F1NAX6
Length = 443
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 118/294 (40%), Positives = 170/294 (57%)
Query: 47 TQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRL 106
T+ + +LL GYD RLRP G V D+ + SF +S+ M+YTI ++ Q W+D+RL
Sbjct: 21 TRILDRLLDGYDNRLRPGLGDSVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWRDERL 80
Query: 107 AFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTT 166
F ++L L+ A KIW PDTFF N K S H++T NKL+RL +G++ Y MR T
Sbjct: 81 KFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTI 140
Query: 167 TLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFTILG 222
C M L +P+D C ++ SY YT +V+ W + VE A+ L Q+ +LG
Sbjct: 141 HAECPMHLEDFPMDVHACPLKFGSYAYTKTEVIYTWTLGKDKSVEVAKGGSRLNQYDLLG 200
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
H + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+N E+ AR
Sbjct: 201 HVVGTEMVRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPAR 260
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP+++Y A+D ++ +C+ FVF+AL+E+A VNY
Sbjct: 261 TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 314
>UNIPROTKB|F1NES8 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:AADN02013490 IPI:IPI00683388
Ensembl:ENSGALT00000027026 Uniprot:F1NES8
Length = 430
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 110/294 (37%), Positives = 171/294 (58%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+ TQ ++ LL YD +LRP+ G P ++ +D+ + S +S + M+YTI ++ Q W D
Sbjct: 21 DATQILNSLLKNYDNKLRPDIGIKPTFIDVDIYVNSIGPVSVIQMEYTIDIFFAQTWYDR 80
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S + LTL+ + +IW+PDTFF N K + H +T N+L+R+ DG + Y +R
Sbjct: 81 RLRFNSTLKALTLNTNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTLRL 140
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA--QLPQFTILG 222
T C++ L +P+D +C + SYGY ++V W+ + ++ +L QF G
Sbjct: 141 TIEAECLLQLQNFPMDTHSCPLVFSSYGYPREEIVYRWRRYSIEVSDQRTWRLYQFDFTG 200
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ G Y +++SF L R +GYF QTY+P IL V+LSWVSFWI ++T AR
Sbjct: 201 LRNTSEVLRTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPAR 260
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ R LPR+SY+ A+D+++ +CF+FVFAAL+EYA +NY
Sbjct: 261 TSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLNY 314
>UNIPROTKB|G1K310 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:AADN02013490
Ensembl:ENSGALT00000011777 OMA:FFCCIED Uniprot:G1K310
Length = 439
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 110/294 (37%), Positives = 171/294 (58%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+ TQ ++ LL YD +LRP+ G P ++ +D+ + S +S + M+YTI ++ Q W D
Sbjct: 30 DATQILNSLLKNYDNKLRPDIGIKPTFIDVDIYVNSIGPVSVIQMEYTIDIFFAQTWYDR 89
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S + LTL+ + +IW+PDTFF N K + H +T N+L+R+ DG + Y +R
Sbjct: 90 RLRFNSTLKALTLNTNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTLRL 149
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA--QLPQFTILG 222
T C++ L +P+D +C + SYGY ++V W+ + ++ +L QF G
Sbjct: 150 TIEAECLLQLQNFPMDTHSCPLVFSSYGYPREEIVYRWRRYSIEVSDQRTWRLYQFDFTG 209
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ G Y +++SF L R +GYF QTY+P IL V+LSWVSFWI ++T AR
Sbjct: 210 LRNTSEVLRTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPAR 269
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ R LPR+SY+ A+D+++ +CF+FVFAAL+EYA +NY
Sbjct: 270 TSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLNY 323
>UNIPROTKB|P34904 [details] [associations]
symbol:GABRG4 "Gamma-aminobutyric acid receptor subunit
gamma-4" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 CTD:2564 EMBL:X73533 IPI:IPI00595504 PIR:S38296
RefSeq:NP_990576.1 UniGene:Gga.692 ProteinModelPortal:P34904
GeneID:396173 KEGG:gga:396173 InParanoid:P34904 NextBio:20816227
Uniprot:P34904
Length = 457
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 110/294 (37%), Positives = 171/294 (58%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+ TQ ++ LL YD +LRP+ G P ++ +D+ + S +S + M+YTI ++ Q W D
Sbjct: 48 DATQILNSLLKNYDNKLRPDIGIKPTFIDVDIYVNSIGPVSVIQMEYTIDIFFAQTWYDR 107
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S + LTL+ + +IW+PDTFF N K + H +T N+L+R+ DG + Y +R
Sbjct: 108 RLRFNSTLKALTLNTNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTLRL 167
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA--QLPQFTILG 222
T C++ L +P+D +C + SYGY ++V W+ + ++ +L QF G
Sbjct: 168 TIEAECLLQLQNFPMDTHSCPLVFSSYGYPREEIVYRWRRYSIEVSDQRTWRLYQFDFTG 227
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ G Y +++SF L R +GYF QTY+P IL V+LSWVSFWI ++T AR
Sbjct: 228 LRNTSEVLRTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDSTPAR 287
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ R LPR+SY+ A+D+++ +CF+FVFAAL+EYA +NY
Sbjct: 288 TSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLNY 341
>UNIPROTKB|P20237 [details] [associations]
symbol:GABRA4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:9913 "Bos taurus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:2001023 "regulation of response to drug" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005434 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007417
GO:GO:0034707 GO:GO:0005254 CTD:2557 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:X61456 EMBL:BC123424 IPI:IPI00689982
PIR:S06838 RefSeq:NP_776968.1 UniGene:Bt.171
ProteinModelPortal:P20237 SMR:P20237 PRIDE:P20237
Ensembl:ENSBTAT00000022141 GeneID:282238 KEGG:bta:282238
InParanoid:P20237 OMA:THANLNM OrthoDB:EOG4MPHQ4 BindingDB:P20237
ChEMBL:CHEMBL3140 NextBio:20806057 GO:GO:2001023 Uniprot:P20237
Length = 555
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 117/296 (39%), Positives = 170/296 (57%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE----EAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + VE + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 342
>UNIPROTKB|P48169 [details] [associations]
symbol:GABRA4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:2001023
"regulation of response to drug" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0007417 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
EMBL:CH471069 DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404
CTD:2557 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 OMA:THANLNM OrthoDB:EOG4MPHQ4
GO:GO:2001023 EMBL:U30461 EMBL:AK090780 EMBL:AC107383 EMBL:BC035055
EMBL:U20166 IPI:IPI00008225 PIR:G01928 RefSeq:NP_000800.2
RefSeq:NP_001191195.1 RefSeq:NP_001191196.1 UniGene:Hs.248112
ProteinModelPortal:P48169 SMR:P48169 IntAct:P48169 STRING:P48169
PhosphoSite:P48169 DMDM:206729865 PRIDE:P48169 DNASU:2557
Ensembl:ENST00000264318 GeneID:2557 KEGG:hsa:2557 UCSC:uc003gxg.3
GeneCards:GC04M046836 HGNC:HGNC:4078 MIM:137141 neXtProt:NX_P48169
PharmGKB:PA28492 InParanoid:P48169 PhylomeDB:P48169
BindingDB:P48169 ChEMBL:CHEMBL2472 GenomeRNAi:2557 NextBio:10099
ArrayExpress:P48169 Bgee:P48169 CleanEx:HS_GABRA4
Genevestigator:P48169 GermOnline:ENSG00000109158 Uniprot:P48169
Length = 554
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 117/296 (39%), Positives = 170/296 (57%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE----EAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + VE + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 342
>UNIPROTKB|E2RG38 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090102 "cochlea development" evidence=IEA]
[GO:0060384 "innervation" evidence=IEA] [GO:0060119 "inner ear
receptor cell development" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0008306
GO:GO:0007605 GO:GO:0001662 GO:GO:0044297 GO:GO:0090102
GO:GO:0006821 GO:GO:0060119 KO:K05175 GeneTree:ENSGT00550000074441
CTD:2558 GO:GO:0060384 OMA:WTNGTTK EMBL:AAEX03002173
EMBL:AAEX03002174 RefSeq:XP_545805.2 ProteinModelPortal:E2RG38
Ensembl:ENSCAFT00000015966 GeneID:488688 KEGG:cfa:488688
NextBio:20861999 Uniprot:E2RG38
Length = 463
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 119/305 (39%), Positives = 169/305 (55%)
Query: 36 KSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITM 95
K T + + T+ + LL GYD RLRP G V D+ + SF +S+ M+YTI +
Sbjct: 39 KDETNDNITIFTRILDGLLDGYDNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDV 98
Query: 96 YLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGD 155
+ Q WKD+RL F + L L+ A KIW PDTFF N K S H++T NKL+RL D
Sbjct: 99 FFRQSWKDERLRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDD 158
Query: 156 GSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ- 214
G++ Y MR T + C M L +P+D C ++ SY Y +VV W + V A+
Sbjct: 159 GTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGTTKSVVVAED 218
Query: 215 ---LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVS 271
L Q+ ++G +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VS
Sbjct: 219 GSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVS 278
Query: 272 FWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEY 331
FW+N E+ AR R+SLP+++Y A+D ++ +C+ FVF+AL+E+
Sbjct: 279 FWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEF 338
Query: 332 AAVNY 336
A VNY
Sbjct: 339 ATVNY 343
>UNIPROTKB|F1PEH3 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2555
OMA:TTAEPNK EMBL:AAEX03009033 RefSeq:XP_858923.2
Ensembl:ENSCAFT00000002984 GeneID:482131 KEGG:cfa:482131
Uniprot:F1PEH3
Length = 442
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 120/316 (37%), Positives = 175/316 (55%)
Query: 26 DSEKLRLCH-KKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
D +L L + ++ + T+ + +LL GYD RLRP G V ++ + SF +
Sbjct: 12 DPARLVLANIQEDEAKNNITIFTRILDRLLDGYDNRLRPGLGDSITEVFTNIYVTSFGPV 71
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
S+ M+YTI ++ Q WKD+RL F +L L+ A KIW PDTFF N K S H++T
Sbjct: 72 SDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMT 131
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
NKL+R+ DG++ Y MR T C M L +P+D +C ++ SY YT +V W
Sbjct: 132 MPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTY 191
Query: 205 TPVRGVEEA----QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
V+ A +L Q+ +LG K +TG Y ++ F L+R IGYFV QTYLP
Sbjct: 192 NASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLP 251
Query: 261 SILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMC 320
I+ V+LS VSFW+N E+ AR R+SLP+++Y A+D ++ +C
Sbjct: 252 CIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 311
Query: 321 FVFVFAALLEYAAVNY 336
+ FVF+AL+E+A VNY
Sbjct: 312 YAFVFSALIEFATVNY 327
>UNIPROTKB|E9PBQ7 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HGNC:HGNC:4076
ChiTaRS:GABRA2 OMA:TTAEPNK EMBL:AC084352 EMBL:AC093745
EMBL:AC095060 EMBL:AC104072 IPI:IPI00922092
ProteinModelPortal:E9PBQ7 SMR:E9PBQ7 Ensembl:ENST00000507069
ArrayExpress:E9PBQ7 Bgee:E9PBQ7 Uniprot:E9PBQ7
Length = 511
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 120/316 (37%), Positives = 175/316 (55%)
Query: 26 DSEKLRLCH-KKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
D +L L + ++ + T+ + +LL GYD RLRP G V ++ + SF +
Sbjct: 21 DPARLVLANIQEDEAKNNITIFTRILDRLLDGYDNRLRPGLGDSITEVFTNIYVTSFGPV 80
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
S+ M+YTI ++ Q WKD+RL F +L L+ A KIW PDTFF N K S H++T
Sbjct: 81 SDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMT 140
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
NKL+R+ DG++ Y MR T C M L +P+D +C ++ SY YT +V W
Sbjct: 141 MPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTY 200
Query: 205 TPVRGVEEA----QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
V+ A +L Q+ +LG K +TG Y ++ F L+R IGYFV QTYLP
Sbjct: 201 NASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLP 260
Query: 261 SILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMC 320
I+ V+LS VSFW+N E+ AR R+SLP+++Y A+D ++ +C
Sbjct: 261 CIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 320
Query: 321 FVFVFAALLEYAAVNY 336
+ FVF+AL+E+A VNY
Sbjct: 321 YAFVFSALIEFATVNY 336
>UNIPROTKB|G5E9Z6 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 EMBL:CH471069 GO:GO:0006821
UniGene:Hs.116250 HGNC:HGNC:4076 ChiTaRS:GABRA2 EMBL:AC084352
EMBL:AC093745 EMBL:AC095060 EMBL:AC104072 ProteinModelPortal:G5E9Z6
SMR:G5E9Z6 Ensembl:ENST00000515082 ArrayExpress:G5E9Z6 Bgee:G5E9Z6
Uniprot:G5E9Z6
Length = 367
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 120/316 (37%), Positives = 175/316 (55%)
Query: 26 DSEKLRLCH-KKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
D +L L + ++ + T+ + +LL GYD RLRP G V ++ + SF +
Sbjct: 21 DPARLVLANIQEDEAKNNITIFTRILDRLLDGYDNRLRPGLGDSITEVFTNIYVTSFGPV 80
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
S+ M+YTI ++ Q WKD+RL F +L L+ A KIW PDTFF N K S H++T
Sbjct: 81 SDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMT 140
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
NKL+R+ DG++ Y MR T C M L +P+D +C ++ SY YT +V W
Sbjct: 141 MPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTY 200
Query: 205 TPVRGVEEA----QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
V+ A +L Q+ +LG K +TG Y ++ F L+R IGYFV QTYLP
Sbjct: 201 NASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLP 260
Query: 261 SILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMC 320
I+ V+LS VSFW+N E+ AR R+SLP+++Y A+D ++ +C
Sbjct: 261 CIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 320
Query: 321 FVFVFAALLEYAAVNY 336
+ FVF+AL+E+A VNY
Sbjct: 321 YAFVFSALIEFATVNY 336
>UNIPROTKB|P31644 [details] [associations]
symbol:GABRA5 "Gamma-aminobutyric acid receptor subunit
alpha-5" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0032809 "neuronal cell body membrane" evidence=IEA] [GO:0043235
"receptor complex" evidence=IEA] [GO:0050811 "GABA receptor
binding" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0060384 "innervation" evidence=IEA]
[GO:0090102 "cochlea development" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=TAS] [GO:0005215 "transporter activity"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0007165 GO:GO:0007420 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0030425 GO:GO:0004872 GO:GO:0005215 GO:GO:0008306
GO:GO:0007605 GO:GO:0032809 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 GO:GO:0090102 DrugBank:DB00683
DrugBank:DB01544 DrugBank:DB00404 GO:GO:0060119 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
DrugBank:DB00189 DrugBank:DB00690 DrugBank:DB00371
OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384 EMBL:L08485 EMBL:AK290453
EMBL:BT009830 EMBL:BC111979 EMBL:BC113422 EMBL:AF061785
EMBL:AF228447 EMBL:AF228448 EMBL:AF228449 IPI:IPI00012471
PIR:A48933 RefSeq:NP_000801.1 RefSeq:NP_001158509.1
UniGene:Hs.24969 ProteinModelPortal:P31644 SMR:P31644 STRING:P31644
PhosphoSite:P31644 DMDM:399519 PaxDb:P31644 PRIDE:P31644 DNASU:2558
Ensembl:ENST00000335625 Ensembl:ENST00000355395
Ensembl:ENST00000400081 GeneID:2558 KEGG:hsa:2558 UCSC:uc001zbd.2
GeneCards:GC15P027112 HGNC:HGNC:4079 MIM:137142 neXtProt:NX_P31644
PharmGKB:PA28493 InParanoid:P31644 OMA:WTNGTTK PhylomeDB:P31644
BindingDB:P31644 ChEMBL:CHEMBL5112 GenomeRNAi:2558 NextBio:10103
ArrayExpress:P31644 Bgee:P31644 CleanEx:HS_GABRA5
Genevestigator:P31644 GermOnline:ENSG00000186297 Uniprot:P31644
Length = 462
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 119/305 (39%), Positives = 169/305 (55%)
Query: 36 KSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITM 95
K T + + T+ + LL GYD RLRP G V D+ + SF +S+ M+YTI +
Sbjct: 39 KDETNDNITIFTRILDGLLDGYDNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDV 98
Query: 96 YLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGD 155
+ Q WKD+RL F + L L+ A KIW PDTFF N K S H++T NKL+RL D
Sbjct: 99 FFRQSWKDERLRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDD 158
Query: 156 GSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ- 214
G++ Y MR T + C M L +P+D C ++ SY Y +VV W + V A+
Sbjct: 159 GTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAED 218
Query: 215 ---LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVS 271
L Q+ ++G +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VS
Sbjct: 219 GSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVS 278
Query: 272 FWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEY 331
FW+N E+ AR R+SLP+++Y A+D ++ +C+ FVF+AL+E+
Sbjct: 279 FWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEF 338
Query: 332 AAVNY 336
A VNY
Sbjct: 339 ATVNY 343
>UNIPROTKB|P47869 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030285 "integral to synaptic vesicle membrane"
evidence=IDA] [GO:0006836 "neurotransmitter transport"
evidence=IMP] [GO:0008503 "benzodiazepine receptor activity"
evidence=IMP] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IMP] [GO:0001505 "regulation of neurotransmitter
levels" evidence=IMP] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0034220 GO:GO:0007214 MIM:103780 GO:GO:0006836 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 GO:GO:0001505 DrugBank:DB00829
DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4ZS935 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 CTD:2555 EMBL:S62907 EMBL:AB209295
IPI:IPI00026631 PIR:I57947 RefSeq:NP_000798.2 RefSeq:NP_001107647.1
UniGene:Hs.116250 ProteinModelPortal:P47869 SMR:P47869
IntAct:P47869 STRING:P47869 TCDB:1.A.9.5.2 PhosphoSite:P47869
DMDM:126302547 PaxDb:P47869 PRIDE:P47869 Ensembl:ENST00000356504
Ensembl:ENST00000381620 Ensembl:ENST00000510861
Ensembl:ENST00000514090 GeneID:2555 KEGG:hsa:2555 UCSC:uc003gxc.3
GeneCards:GC04M046167 HGNC:HGNC:4076 HPA:HPA014261 MIM:137140
neXtProt:NX_P47869 PharmGKB:PA28490 InParanoid:P47869
PhylomeDB:P47869 BindingDB:P47869 ChEMBL:CHEMBL4956 ChiTaRS:GABRA2
DrugBank:DB01558 DrugBank:DB01567 GenomeRNAi:2555 NextBio:10091
ArrayExpress:P47869 Bgee:P47869 CleanEx:HS_GABRA2
Genevestigator:P47869 GermOnline:ENSG00000151834 Uniprot:P47869
Length = 451
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 120/316 (37%), Positives = 175/316 (55%)
Query: 26 DSEKLRLCH-KKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
D +L L + ++ + T+ + +LL GYD RLRP G V ++ + SF +
Sbjct: 21 DPARLVLANIQEDEAKNNITIFTRILDRLLDGYDNRLRPGLGDSITEVFTNIYVTSFGPV 80
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
S+ M+YTI ++ Q WKD+RL F +L L+ A KIW PDTFF N K S H++T
Sbjct: 81 SDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMT 140
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
NKL+R+ DG++ Y MR T C M L +P+D +C ++ SY YT +V W
Sbjct: 141 MPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTY 200
Query: 205 TPVRGVEEA----QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
V+ A +L Q+ +LG K +TG Y ++ F L+R IGYFV QTYLP
Sbjct: 201 NASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLP 260
Query: 261 SILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMC 320
I+ V+LS VSFW+N E+ AR R+SLP+++Y A+D ++ +C
Sbjct: 261 CIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 320
Query: 321 FVFVFAALLEYAAVNY 336
+ FVF+AL+E+A VNY
Sbjct: 321 YAFVFSALIEFATVNY 336
>UNIPROTKB|F1SR89 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005435 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0008306 GO:GO:0007605 GO:GO:0001662
GO:GO:0044297 GO:GO:0090102 GO:GO:0006821 GO:GO:0060119 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:0060384 OMA:WTNGTTK
EMBL:CU861926 RefSeq:XP_003121696.1 UniGene:Ssc.6556
Ensembl:ENSSSCT00000005329 GeneID:100520472 KEGG:ssc:100520472
Uniprot:F1SR89
Length = 463
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 119/305 (39%), Positives = 169/305 (55%)
Query: 36 KSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITM 95
K T + + T+ + LL GYD RLRP G V D+ + SF +S+ M+YTI +
Sbjct: 39 KEETNDNITIFTRILDGLLDGYDNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDV 98
Query: 96 YLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGD 155
+ Q WKD+RL F + L L+ A KIW PDTFF N K S H++T NKL+RL D
Sbjct: 99 FFRQSWKDERLRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDD 158
Query: 156 GSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ- 214
G++ Y MR T + C M L +P+D C ++ SY Y +VV W + V A+
Sbjct: 159 GTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGTTKSVVVAED 218
Query: 215 ---LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVS 271
L Q+ ++G +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VS
Sbjct: 219 GSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVS 278
Query: 272 FWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEY 331
FW+N E+ AR R+SLP+++Y A+D ++ +C+ FVF+AL+E+
Sbjct: 279 FWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEF 338
Query: 332 AAVNY 336
A VNY
Sbjct: 339 ATVNY 343
>UNIPROTKB|F1NXA6 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0001505 "regulation of neurotransmitter
levels" evidence=IEA] [GO:0006836 "neurotransmitter transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008503 "benzodiazepine receptor
activity" evidence=IEA] [GO:0030285 "integral to synaptic vesicle
membrane" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0006821
GeneTree:ENSGT00550000074441 GO:GO:0008503 OMA:TTAEPNK
EMBL:AC147646 IPI:IPI00603099 Ensembl:ENSGALT00000022974
Uniprot:F1NXA6
Length = 458
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 117/294 (39%), Positives = 167/294 (56%)
Query: 47 TQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRL 106
T+ + +LL GYD RLRP G V ++ + SF +S+ M+YTI ++ Q WKD+RL
Sbjct: 48 TRILDRLLDGYDNRLRPGLGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQRWKDERL 107
Query: 107 AFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTT 166
F +L L+ A KIW PDTFF N K S H++T NKL+R+ DG++ Y MR T
Sbjct: 108 KFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTV 167
Query: 167 TLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA----QLPQFTILG 222
C M L +P+D +C ++ SY YT +V W V+ A +L Q+ +LG
Sbjct: 168 QAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGSRLNQYDLLG 227
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
K +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+N E+ AR
Sbjct: 228 QTIGKETVKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPAR 287
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP+++Y A+D ++ +C+ FVF+AL+E+A VNY
Sbjct: 288 TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 341
>UNIPROTKB|F1P037 [details] [associations]
symbol:GLRB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0001964
"startle response" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=IEA] [GO:0060012 "synaptic transmission, glycinergic"
evidence=IEA] [GO:0060013 "righting reflex" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0042391
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GeneTree:ENSGT00550000074453 GO:GO:0016594 CTD:2743 KO:K05196
PANTHER:PTHR18945:SF29 OMA:PTMFKCL EMBL:AADN02016519
EMBL:AADN02016520 IPI:IPI00600545 RefSeq:XP_420379.2
UniGene:Gga.14206 ProteinModelPortal:F1P037
Ensembl:ENSGALT00000015305 GeneID:422411 KEGG:gga:422411
NextBio:20825047 Uniprot:F1P037
Length = 497
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 127/329 (38%), Positives = 196/329 (59%)
Query: 17 ELESQIGNSDSEKLRLCHKKSATTE--RL-ANVTQTI-SQLLHGYDIRLRPNFGGDPLYV 72
E S+ G +K LC + + + R+ AN T I ++LL YD R+RPNF G P+ V
Sbjct: 24 EKSSKKGKG-KKKQYLCPSQQSAEDLARVPANSTSNILNRLLLSYDPRIRPNFKGIPVDV 82
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE---DEVLTLSGDFAEKIWVPD 129
+++ I SF SI E +MDY + ++L Q W D RL ++ + LT+ + +W PD
Sbjct: 83 AVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPNDWRGSDTLTVDPTMFKCLWKPD 142
Query: 130 TFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIE 189
FFAN+KN+ HDVT+ N L+ + DG + MR + TL+C +DL +P+D Q C +++E
Sbjct: 143 LFFANEKNANFHDVTQENILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLE 202
Query: 190 SYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTILGHET---NDRKEKLATGTYQRLSLSFK 245
S+GYT D+ W+ PV+ +E+ LPQF I + N K TG Y + + F
Sbjct: 203 SFGYTTDDLRFIWQSGDPVQ-LEKIALPQFDIKKEDIEYGNCTKYYKGTGYYTCVEVIFT 261
Query: 246 LQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLP 305
L+R +G+++ Y P++LIV+LSW+SFWIN +A++ARV + LP
Sbjct: 262 LRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELP 321
Query: 306 RISYVKAIDIYLVMCFVFVFAALLEYAAV 334
++SYVKA+D++L++C +F FA+L+EYA V
Sbjct: 322 KVSYVKALDVWLIVCLLFGFASLVEYAVV 350
>UNIPROTKB|Q08E50 [details] [associations]
symbol:GABRA5 "Gamma-aminobutyric acid receptor subunit
alpha-5" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005435 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425
GO:GO:0008306 GO:GO:0007605 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 GO:GO:0044297 GO:GO:0090102 GO:GO:0060119 KO:K05175
eggNOG:NOG238757 GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC EMBL:BC123418 IPI:IPI00701740
RefSeq:NP_001069312.1 UniGene:Bt.63027 ProteinModelPortal:Q08E50
STRING:Q08E50 PRIDE:Q08E50 Ensembl:ENSBTAT00000004397 GeneID:523515
KEGG:bta:523515 CTD:2558 InParanoid:Q08E50 OMA:IRSERIH
NextBio:20873764 GO:GO:0060384 Uniprot:Q08E50
Length = 462
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 118/305 (38%), Positives = 170/305 (55%)
Query: 36 KSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITM 95
K+ T + + T+ + LL GYD RLRP G V D+ + SF +S+ M+YTI +
Sbjct: 39 KAETDDNITIFTRILDGLLDGYDNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDV 98
Query: 96 YLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGD 155
+ Q WKD+RL F + L L+ A KIW PDTFF N K S H++T NKL+RL D
Sbjct: 99 FFRQSWKDERLRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDD 158
Query: 156 GSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ- 214
G++ Y MR T + C M L +P+D C ++ SY Y +V+ W + V A+
Sbjct: 159 GTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVIYVWTNGTAKSVVVAED 218
Query: 215 ---LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVS 271
L Q+ ++G +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VS
Sbjct: 219 GSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVS 278
Query: 272 FWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEY 331
FW+N E+ AR R+SLP+++Y A+D ++ +C+ FVF+AL+E+
Sbjct: 279 FWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEF 338
Query: 332 AAVNY 336
A VNY
Sbjct: 339 ATVNY 343
>UNIPROTKB|I3LIV9 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001023 "regulation of response to drug" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0007417 GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441
GO:GO:2001023 EMBL:CU467563 RefSeq:XP_003356954.1
Ensembl:ENSSSCT00000031430 GeneID:100622712 KEGG:ssc:100622712
OMA:KEPAIAM Uniprot:I3LIV9
Length = 554
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 117/296 (39%), Positives = 170/296 (57%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N T+ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D
Sbjct: 47 NFTRILDGLLDGYDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDK 106
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL + E+L L+ K+W PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 107 RLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRL 166
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE----EAQLPQFTI 220
T + C M L +P+D C ++ SY Y +++ W + P + VE + L Q+ +
Sbjct: 167 TISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDL 226
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F L+R +GYF+ QTY+P I+ V+LS VSFWIN E+
Sbjct: 227 IGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVP 286
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 287 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 342
>MGI|MGI:95614 [details] [associations]
symbol:Gabra2 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 2" species:10090 "Mus musculus" [GO:0001505
"regulation of neurotransmitter levels" evidence=ISO] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0006836 "neurotransmitter transport" evidence=ISO] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISO]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
MGI:MGI:95614 GO:GO:0005886 GO:GO:0030285 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0006836
GO:GO:0034707 GO:GO:0005254 GO:GO:0001505 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4ZS935 GO:GO:0008503 CTD:2555 EMBL:M86567
IPI:IPI00110598 RefSeq:NP_032092.1 UniGene:Mm.5304
ProteinModelPortal:P26048 SMR:P26048 STRING:P26048
PhosphoSite:P26048 PaxDb:P26048 PRIDE:P26048
Ensembl:ENSMUST00000000572 GeneID:14395 KEGG:mmu:14395
InParanoid:P26048 OMA:TTAEPNK BindingDB:P26048 ChEMBL:CHEMBL2705
NextBio:285927 Bgee:P26048 Genevestigator:P26048
GermOnline:ENSMUSG00000000560 Uniprot:P26048
Length = 451
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 117/294 (39%), Positives = 167/294 (56%)
Query: 47 TQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRL 106
T+ + +LL GYD RLRP G V ++ + SF +S+ M+YTI ++ Q WKD+RL
Sbjct: 43 TRILDRLLDGYDNRLRPGLGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERL 102
Query: 107 AFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTT 166
F +L L+ A KIW PDTFF N K S H++T NKL+R+ DG++ Y MR T
Sbjct: 103 KFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTV 162
Query: 167 TLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA----QLPQFTILG 222
C M L +P+D +C ++ SY YT +V W V+ A +L Q+ +LG
Sbjct: 163 QAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGSRLNQYDLLG 222
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
K +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+N E+ AR
Sbjct: 223 QSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPAR 282
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP+++Y A+D ++ +C+ FVF+AL+E+A VNY
Sbjct: 283 TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 336
>ZFIN|ZDB-GENE-040426-1692 [details] [associations]
symbol:gabra6a "gamma-aminobutyric acid (GABA) A
receptor, alpha 6a" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-040426-1692
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00550000074441 EMBL:CR628344 EMBL:CU062437
IPI:IPI00800523 Ensembl:ENSDART00000054982 Bgee:E7FGS3
Uniprot:E7FGS3
Length = 435
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 118/296 (39%), Positives = 170/296 (57%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
N+T+ + LL GYD RLRP G V D+ + SF +S+V+M++T+ M+ Q W D+
Sbjct: 26 NITRILDGLLEGYDNRLRPGSGVSVTEVKTDIFVTSFGPVSDVNMEFTMDMFFRQMWVDE 85
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RLAF E+L L+ +KIW PDTFF N + S H++T NKL R+ +G++ Y MR
Sbjct: 86 RLAFQGPIEILPLNNRMVDKIWTPDTFFRNARKSLAHNMTSPNKLFRIMQNGTVFYTMRL 145
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTI 220
T + C M L +P+D C + SY YT ++V W++ V E + L Q+ +
Sbjct: 146 TVSAVCPMVLRDFPMDGHTCPLYFGSYAYTNREIVYTWRKGLEASVDFPPESSSLLQYDL 205
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
LG K +TG Y + F LQR +GY + QTY+P I++V+LS VSFWIN E+
Sbjct: 206 LGQTLFTETYKFSTGLYSVQVVHFYLQRKLGYHLIQTYIPLIMVVVLSQVSFWINKESVP 265
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR RSSLP++SY A+D ++ +CF FV +AL+E+AAVNY
Sbjct: 266 ARTVAGITTVLTMTTLSISARSSLPKVSYATAMDWFIAVCFAFVASALVEFAAVNY 321
>UNIPROTKB|E1BW42 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0044297 "cell body" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0090102 "cochlea development"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0044297
GO:GO:0006821 GeneTree:ENSGT00550000074441 EMBL:AC145944
IPI:IPI00812061 ProteinModelPortal:E1BW42
Ensembl:ENSGALT00000027027 OMA:FRTHLLL Uniprot:E1BW42
Length = 464
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 118/305 (38%), Positives = 169/305 (55%)
Query: 36 KSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITM 95
K T + + T+ + LL GYD RLRP G V D+ + SF +S+ M+YTI +
Sbjct: 39 KEDTNDNITIFTRILDGLLDGYDNRLRPGLGERITQVKTDIYVTSFGPVSDTEMEYTIDV 98
Query: 96 YLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGD 155
+ Q WKD+RL F + L L+ A KIW PDTFF N K S H++T NKL+RL D
Sbjct: 99 FFRQSWKDERLRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDD 158
Query: 156 GSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ- 214
G++ Y MR T + C M L +P+D C ++ SY Y +V+ W + V A+
Sbjct: 159 GTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVIYVWTNSTTTSVVVAED 218
Query: 215 ---LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVS 271
L Q+ ++G +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VS
Sbjct: 219 GSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVS 278
Query: 272 FWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEY 331
FW+N E+ AR R+SLP+++Y A+D ++ +C+ FVF+AL+E+
Sbjct: 279 FWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEF 338
Query: 332 AAVNY 336
A VNY
Sbjct: 339 ATVNY 343
>UNIPROTKB|Q7LZ70 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 HSSP:P23415 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:AC147646 IPI:IPI00600373
PIR:JH0824 RefSeq:XP_420725.2 UniGene:Gga.5062
Ensembl:ENSGALT00000022976 GeneID:422771 KEGG:gga:422771
InParanoid:Q7LZ70 NextBio:20825358 Uniprot:Q7LZ70
Length = 464
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 113/294 (38%), Positives = 168/294 (57%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+VT + LL GYD +LRP+ G + D+ + S + ++M+YTI + Q W D
Sbjct: 59 DVTHILDSLLQGYDNKLRPDIGVRTTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWYDS 118
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S +VL L+ + KIW+PDTFF N + S H +T N+L+R+ DG + Y +R
Sbjct: 119 RLKFNSSMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLRL 178
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA--QLPQFTILG 222
T C + LH +P+D +C +E SYGY ++ WK+T V + +L QF +G
Sbjct: 179 TINAECYLQLHNFPMDEHSCPLEFSSYGYPRNEIEYKWKKTSVEVADPKYWRLYQFAFVG 238
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+G Y +++ F L R +GYF QTY+P IL V+LSWVSFWIN +A AR
Sbjct: 239 LRNTTEISHTLSGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPAR 298
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ R SLP++SYV A+D+++ +CF+FVFAAL+EY ++Y
Sbjct: 299 TSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHY 352
>UNIPROTKB|F1RR70 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
OMA:HSDSKYH EMBL:FP016136 Ensembl:ENSSSCT00000018539 Uniprot:F1RR70
Length = 442
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 119/296 (40%), Positives = 170/296 (57%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M+YT+ ++ Q W D+
Sbjct: 22 NVSRILDNLLEGYDNRLRPGFGGAVTEVQTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDE 81
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 82 RLKFGGPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRA 141
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE----EAQLPQFTI 220
C M L +P+D C ++ SY Y +++ WK+ P+ VE + L Q+ +
Sbjct: 142 D----CPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 197
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 198 IGQTVSSETIKSNTGEYAIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 257
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 258 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 313
>MGI|MGI:95617 [details] [associations]
symbol:Gabra5 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 5" species:10090 "Mus musculus" [GO:0001662
"behavioral fear response" evidence=IMP] [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0007605 "sensory perception of sound" evidence=IMP] [GO:0008306
"associative learning" evidence=IMP] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030425 "dendrite"
evidence=ISO;IDA] [GO:0032809 "neuronal cell body membrane"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0043235 "receptor complex" evidence=ISO] [GO:0044297 "cell
body" evidence=IDA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0050811 "GABA receptor binding"
evidence=ISO] [GO:0060119 "inner ear receptor cell development"
evidence=IMP] [GO:0060384 "innervation" evidence=IMP] [GO:0090102
"cochlea development" evidence=IMP] InterPro:IPR001390
InterPro:IPR005435 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236 MGI:MGI:95617
GO:GO:0007420 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0008306 GO:GO:0007605 GO:GO:0032809
GO:GO:0001662 GO:GO:0034707 GO:GO:0005254 GO:GO:0044297
GO:GO:0090102 GO:GO:0060119 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384
OMA:WTNGTTK EMBL:AK038476 EMBL:AK083185 EMBL:BC062112
IPI:IPI00221880 RefSeq:NP_795916.1 UniGene:Mm.273114
ProteinModelPortal:Q8BHJ7 SMR:Q8BHJ7 MINT:MINT-1789015
STRING:Q8BHJ7 PhosphoSite:Q8BHJ7 PRIDE:Q8BHJ7
Ensembl:ENSMUST00000068456 GeneID:110886 KEGG:mmu:110886
UCSC:uc009heb.1 InParanoid:Q8BHJ7 BindingDB:Q8BHJ7
ChEMBL:CHEMBL2304 NextBio:364867 Bgee:Q8BHJ7 Genevestigator:Q8BHJ7
GermOnline:ENSMUSG00000055078 Uniprot:Q8BHJ7
Length = 463
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 118/302 (39%), Positives = 168/302 (55%)
Query: 39 TTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLN 98
T + + T+ + LL GYD RLRP G V D+ + SF +S+ M+YTI ++
Sbjct: 42 TNDNITIFTRILDGLLDGYDNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDVFFR 101
Query: 99 QYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSI 158
Q WKD+RL F + L L+ A KIW PDTFF N K S H++T NKL+RL DG++
Sbjct: 102 QSWKDERLRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTL 161
Query: 159 TYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ---- 214
Y MR T + C M L +P+D C ++ SY Y +VV W + V A+
Sbjct: 162 LYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSR 221
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
L Q+ ++G +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+
Sbjct: 222 LNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWL 281
Query: 275 NHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
N E+ AR R+SLP+++Y A+D ++ +C+ FVF+AL+E+A V
Sbjct: 282 NRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATV 341
Query: 335 NY 336
NY
Sbjct: 342 NY 343
>RGD|61859 [details] [associations]
symbol:Gabra5 "gamma-aminobutyric acid (GABA) A receptor, alpha 5"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0004890 "GABA-A receptor activity"
evidence=IDA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEP;IMP] [GO:0007420 "brain development" evidence=IEP]
[GO:0007605 "sensory perception of sound" evidence=IEA;ISO]
[GO:0008306 "associative learning" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0032809 "neuronal cell
body membrane" evidence=IDA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0043235 "receptor complex" evidence=IDA]
[GO:0044297 "cell body" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0048666 "neuron development"
evidence=ISO] [GO:0050811 "GABA receptor binding" evidence=IPI]
[GO:0060119 "inner ear receptor cell development" evidence=IEA;ISO]
[GO:0060384 "innervation" evidence=IEA;ISO] [GO:0090102 "cochlea
development" evidence=IEA;ISO] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 RGD:61859 GO:GO:0007420 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0030425 GO:GO:0008306 GO:GO:0007605
GO:GO:0043235 GO:GO:0032809 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 GO:GO:0090102 GO:GO:0060119 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384 OMA:WTNGTTK EMBL:X51992
EMBL:L08494 IPI:IPI00325359 PIR:B34130 RefSeq:NP_058991.1
UniGene:Rn.10368 ProteinModelPortal:P19969 MINT:MINT-1783807
STRING:P19969 PhosphoSite:P19969 Ensembl:ENSRNOT00000014573
GeneID:29707 KEGG:rno:29707 UCSC:RGD:61859 InParanoid:P19969
BindingDB:P19969 ChEMBL:CHEMBL300 NextBio:610127
Genevestigator:P19969 GermOnline:ENSRNOG00000010803 Uniprot:P19969
Length = 464
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 118/302 (39%), Positives = 168/302 (55%)
Query: 39 TTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLN 98
T + + T+ + LL GYD RLRP G V D+ + SF +S+ M+YTI ++
Sbjct: 42 TNDNITIFTRILDGLLDGYDNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDVFFR 101
Query: 99 QYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSI 158
Q WKD+RL F + L L+ A KIW PDTFF N K S H++T NKL+RL DG++
Sbjct: 102 QSWKDERLRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTL 161
Query: 159 TYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ---- 214
Y MR T + C M L +P+D C ++ SY Y +VV W + V A+
Sbjct: 162 LYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSR 221
Query: 215 LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI 274
L Q+ ++G +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+
Sbjct: 222 LNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWL 281
Query: 275 NHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
N E+ AR R+SLP+++Y A+D ++ +C+ FVF+AL+E+A V
Sbjct: 282 NRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATV 341
Query: 335 NY 336
NY
Sbjct: 342 NY 343
>UNIPROTKB|F1MNR0 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:PKNSDEM EMBL:DAAA02021900
EMBL:DAAA02021901 IPI:IPI00923967 Ensembl:ENSBTAT00000061342
Uniprot:F1MNR0
Length = 375
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 115/253 (45%), Positives = 165/253 (65%)
Query: 88 SMDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTER 146
S DY + ++L Q W D RLA+S D+ L L + IW PD FFAN+K + H+VT
Sbjct: 1 SQDYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTD 60
Query: 147 NKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK-ET 205
NKL+R+ +G++ Y +R T TL+C MDL +P+D Q C +++ES+GYT+ D++ W+ E
Sbjct: 61 NKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEA 120
Query: 206 PVRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSIL 263
PV+ E LPQF +L E + R + TG + + + F L+R +GY++ Q Y+PS+L
Sbjct: 121 PVQVAEGLTLPQF-LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLL 179
Query: 264 IVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVF 323
IV+LSWVSFWIN +A ARVA R+SLP++SYVKAIDI++ +C +F
Sbjct: 180 IVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLF 239
Query: 324 VFAALLEYAAVNY 336
VF+ALLEYAAVN+
Sbjct: 240 VFSALLEYAAVNF 252
>UNIPROTKB|P10063 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4ZS935 EMBL:X12361 IPI:IPI00713807
PIR:S12510 RefSeq:NP_776966.1 UniGene:Bt.174
ProteinModelPortal:P10063 GeneID:282236 KEGG:bta:282236 CTD:2555
InParanoid:P10063 BindingDB:P10063 ChEMBL:CHEMBL2321
NextBio:20806055 Uniprot:P10063
Length = 451
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 119/316 (37%), Positives = 174/316 (55%)
Query: 26 DSEKLRLCH-KKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSI 84
D +L L + ++ + T+ + +LL GYD RLRP G V ++ + SF +
Sbjct: 21 DPARLVLANIQEDEAKNNITIFTRILDRLLDGYDNRLRPGLGDSITEVFTNIYVTSFGPV 80
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVT 144
S+ M+YTI ++ Q WKD+RL F +L L+ A KIW PDTFF N K S H++T
Sbjct: 81 SDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMT 140
Query: 145 ERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE 204
NKL+R+ DG++ Y MR T C M L +P+D +C ++ SY YT +V W
Sbjct: 141 MPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTY 200
Query: 205 TPVRGVEEA----QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
V+ A +L Q+ + G K +TG Y ++ F L+R IGYFV QTYLP
Sbjct: 201 NASDSVQVAPDGSRLNQYDLPGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLP 260
Query: 261 SILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMC 320
I+ V+LS VSFW+N E+ AR R+SLP+++Y A+D ++ +C
Sbjct: 261 CIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 320
Query: 321 FVFVFAALLEYAAVNY 336
+ FVF+AL+E+A VNY
Sbjct: 321 YAFVFSALIEFATVNY 336
>UNIPROTKB|Q9GJS9 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9913
"Bos taurus" [GO:0001964 "startle response" evidence=ISS]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=ISS] [GO:0016933 "extracellular-glycine-gated ion channel
activity" evidence=ISS] [GO:0016594 "glycine binding" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0007268
"synaptic transmission" evidence=ISS] [GO:0007218 "neuropeptide
signaling pathway" evidence=ISS] [GO:0006811 "ion transport"
evidence=ISS] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 GO:GO:0005886 GO:GO:0007399 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218
GO:GO:0016934 GO:GO:0034707 GO:GO:0001964 HOVERGEN:HBG051707
GO:GO:0016933 HOGENOM:HOG000231336 EMBL:AF268376 EMBL:AF268374
EMBL:AF268367 EMBL:AF268370 EMBL:AF268369 EMBL:AF268371
EMBL:AF268368 EMBL:AF268372 EMBL:AF268373 EMBL:BC123491
IPI:IPI00694047 RefSeq:NP_776496.1 UniGene:Bt.5975
ProteinModelPortal:Q9GJS9 PRIDE:Q9GJS9 GeneID:281198
KEGG:bta:281198 CTD:2743 eggNOG:NOG295166 InParanoid:Q9GJS9
KO:K05196 OrthoDB:EOG4HMJ97 NextBio:20805254 PANTHER:PTHR18945:SF29
Uniprot:Q9GJS9
Length = 497
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 127/329 (38%), Positives = 195/329 (59%)
Query: 17 ELESQIGNSDSEKLRLCHKKSATTE--RL-ANVTQTI-SQLLHGYDIRLRPNFGGDPLYV 72
E S+ G +K LC + + + R+ AN T I ++LL YD R+RPNF G P+ V
Sbjct: 24 EKSSKKGKG-KKKQYLCPSQQSAEDLARVPANSTSNILNRLLVSYDPRIRPNFKGIPVDV 82
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE---DEVLTLSGDFAEKIWVPD 129
+++ I SF SI E +MDY + ++L Q W D RL S+ + LT+ + +W PD
Sbjct: 83 VVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPD 142
Query: 130 TFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIE 189
FFAN+K++ HDVT+ N L+ + DG + MR + TL+C +DL +P+D Q C +++E
Sbjct: 143 LFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLE 202
Query: 190 SYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTILGHET---NDRKEKLATGTYQRLSLSFK 245
S+GYT D+ W+ PV+ +E+ LPQF I + N K TG Y + + F
Sbjct: 203 SFGYTTDDLRFIWQSGDPVQ-LEKIALPQFDIKKEDIEYGNCTKYYKGTGYYTCVEVIFT 261
Query: 246 LQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLP 305
L+R +G+++ Y P++LIV+LSW+SFWIN +A++ARV + LP
Sbjct: 262 LRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELP 321
Query: 306 RISYVKAIDIYLVMCFVFVFAALLEYAAV 334
++SYVKA+D++L+ C +F FA+L+EYA V
Sbjct: 322 KVSYVKALDVWLIACLLFGFASLVEYAVV 350
>UNIPROTKB|E2QS67 [details] [associations]
symbol:GLRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008060
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021 GO:GO:0007399
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0007628 GO:GO:0001964 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0060012 CTD:2743 KO:K05196
PANTHER:PTHR18945:SF29 OMA:PTMFKCL EMBL:AAEX03010077
RefSeq:XP_532701.1 Ensembl:ENSCAFT00000013690 GeneID:475477
KEGG:cfa:475477 NextBio:20851316 Uniprot:E2QS67
Length = 497
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 127/329 (38%), Positives = 195/329 (59%)
Query: 17 ELESQIGNSDSEKLRLCHKKSATTE--RL-ANVTQTI-SQLLHGYDIRLRPNFGGDPLYV 72
E S+ G +K LC + + + R+ AN T I ++LL YD R+RPNF G P+ V
Sbjct: 24 EKSSKKGKG-KKKQYLCPSQQSAEDLARVPANSTSNILNRLLVSYDPRIRPNFKGIPVDV 82
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE---DEVLTLSGDFAEKIWVPD 129
+++ I SF SI E +MDY + ++L Q W D RL S+ + LT+ + +W PD
Sbjct: 83 VVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPD 142
Query: 130 TFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIE 189
FFAN+K++ HDVT+ N L+ + DG + MR + TL+C +DL +P+D Q C +++E
Sbjct: 143 LFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLE 202
Query: 190 SYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTILGHET---NDRKEKLATGTYQRLSLSFK 245
S+GYT D+ W+ PV+ +E+ LPQF I + N K TG Y + + F
Sbjct: 203 SFGYTTDDLRFIWQSGDPVQ-LEKIALPQFDIKKEDIEYGNCTKYYKGTGYYTCVEVIFT 261
Query: 246 LQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLP 305
L+R +G+++ Y P++LIV+LSW+SFWIN +A++ARV + LP
Sbjct: 262 LRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELP 321
Query: 306 RISYVKAIDIYLVMCFVFVFAALLEYAAV 334
++SYVKA+D++L+ C +F FA+L+EYA V
Sbjct: 322 KVSYVKALDVWLIACLLFGFASLVEYAVV 350
>UNIPROTKB|P48167 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9606
"Homo sapiens" [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007340
"acrosome reaction" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0051291 "protein heterooligomerization" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0060013 "righting reflex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IDA;TAS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0006811 "ion transport" evidence=IDA] [GO:0007218
"neuropeptide signaling pathway" evidence=IDA] [GO:0016933
"extracellular-glycine-gated ion channel activity" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007399
"nervous system development" evidence=IMP] [GO:0001964 "startle
response" evidence=IMP] [GO:0016594 "glycine binding" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_15518 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 GO:GO:0051291 GO:GO:0007399 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601 GO:GO:0042391
GO:GO:0016934 GO:GO:0007340 EMBL:CH471056 GO:GO:0060013
DrugBank:DB00145 GO:GO:0034707 GO:GO:0007628 GO:GO:0001964
HOVERGEN:HBG051707 Orphanet:3197 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0060012 TCDB:1.A.9.3.1 CTD:2743 eggNOG:NOG295166 KO:K05196
OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29 EMBL:U33267 EMBL:AF094754
EMBL:AF094755 EMBL:CD013911 EMBL:AK290617 EMBL:AC079403
EMBL:BC032635 IPI:IPI00008224 IPI:IPI00945266 PIR:G02031
RefSeq:NP_000815.1 RefSeq:NP_001159532.1 RefSeq:NP_001159533.1
UniGene:Hs.32973 ProteinModelPortal:P48167 SMR:P48167 STRING:P48167
PhosphoSite:P48167 DMDM:1346173 PRIDE:P48167 DNASU:2743
Ensembl:ENST00000264428 Ensembl:ENST00000509282
Ensembl:ENST00000541722 GeneID:2743 KEGG:hsa:2743 UCSC:uc003ipj.2
GeneCards:GC04P157997 HGNC:HGNC:4329 MIM:138492 MIM:614619
neXtProt:NX_P48167 PharmGKB:PA28730 InParanoid:P48167 OMA:PTMFKCL
PhylomeDB:P48167 GenomeRNAi:2743 NextBio:10812 ArrayExpress:P48167
Bgee:P48167 CleanEx:HS_GLRB Genevestigator:P48167
GermOnline:ENSG00000109738 Uniprot:P48167
Length = 497
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 127/329 (38%), Positives = 195/329 (59%)
Query: 17 ELESQIGNSDSEKLRLCHKKSATTE--RL-ANVTQTI-SQLLHGYDIRLRPNFGGDPLYV 72
E S+ G +K LC + + + R+ AN T I ++LL YD R+RPNF G P+ V
Sbjct: 24 EKSSKKGKG-KKKQYLCPSQQSAEDLARVPANSTSNILNRLLVSYDPRIRPNFKGIPVDV 82
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE---DEVLTLSGDFAEKIWVPD 129
+++ I SF SI E +MDY + ++L Q W D RL S+ + LT+ + +W PD
Sbjct: 83 VVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPD 142
Query: 130 TFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIE 189
FFAN+K++ HDVT+ N L+ + DG + MR + TL+C +DL +P+D Q C +++E
Sbjct: 143 LFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLE 202
Query: 190 SYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTILGHET---NDRKEKLATGTYQRLSLSFK 245
S+GYT D+ W+ PV+ +E+ LPQF I + N K TG Y + + F
Sbjct: 203 SFGYTTDDLRFIWQSGDPVQ-LEKIALPQFDIKKEDIEYGNCTKYYKGTGYYTCVEVIFT 261
Query: 246 LQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLP 305
L+R +G+++ Y P++LIV+LSW+SFWIN +A++ARV + LP
Sbjct: 262 LRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELP 321
Query: 306 RISYVKAIDIYLVMCFVFVFAALLEYAAV 334
++SYVKA+D++L+ C +F FA+L+EYA V
Sbjct: 322 KVSYVKALDVWLIACLLFGFASLVEYAVV 350
>UNIPROTKB|F1RJ16 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:PKNSDEM EMBL:CT737274 EMBL:CT841549
Ensembl:ENSSSCT00000010633 Uniprot:F1RJ16
Length = 376
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 114/251 (45%), Positives = 164/251 (65%)
Query: 90 DYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNK 148
DY + ++L Q W D RLA+S D+ L L + IW PD FFAN+K + H+VT NK
Sbjct: 2 DYRVNIFLRQKWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 61
Query: 149 LVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK-ETPV 207
L+R+ +G++ Y +R T TL+C MDL +P+D Q C +++ES+GYT+ D++ W+ E PV
Sbjct: 62 LLRIFKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPV 121
Query: 208 RGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIV 265
+ E LPQF +L E + R + TG + + + F L+R +GY++ Q Y+PS+LIV
Sbjct: 122 QVAEGLTLPQF-LLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIV 180
Query: 266 MLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVF 325
+LSWVSFWIN +A ARVA R+SLP++SYVKAIDI++ +C +FVF
Sbjct: 181 ILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVF 240
Query: 326 AALLEYAAVNY 336
+ALLEYAAVN+
Sbjct: 241 SALLEYAAVNF 251
>RGD|2706 [details] [associations]
symbol:Glrb "glycine receptor, beta" species:10116 "Rattus
norvegicus" [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=ISO;ISS]
[GO:0006821 "chloride transport" evidence=ISO] [GO:0007218
"neuropeptide signaling pathway" evidence=ISO;ISS] [GO:0007268
"synaptic transmission" evidence=ISO;ISS;TAS] [GO:0007340 "acrosome
reaction" evidence=IEA;ISO] [GO:0007399 "nervous system development"
evidence=ISO;ISS] [GO:0007601 "visual perception" evidence=IEA;ISO]
[GO:0007628 "adult walking behavior" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA;TAS] [GO:0016594 "glycine binding" evidence=ISO;ISS;IDA]
[GO:0016933 "extracellular-glycine-gated ion channel activity"
evidence=ISO;ISS;IDA;TAS] [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA;ISO;ISS] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA;ISO]
[GO:0045211 "postsynaptic membrane" evidence=IEA;TAS] [GO:0050905
"neuromuscular process" evidence=ISO] [GO:0051291 "protein
heterooligomerization" evidence=IDA] [GO:0060012 "synaptic
transmission, glycinergic" evidence=ISO;IDA] [GO:0060013 "righting
reflex" evidence=IEA;ISO] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236 RGD:2706
GO:GO:0016021 GO:GO:0005886 GO:GO:0051291 GO:GO:0007399 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0034707
GO:GO:0007628 GO:GO:0001964 HOVERGEN:HBG051707 GO:GO:0016933 PDB:1T3E
PDB:2FTS PDBsum:1T3E PDBsum:2FTS GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0060012 CTD:2743
eggNOG:NOG295166 KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29
OMA:PTMFKCL EMBL:AJ310839 IPI:IPI00202491 PIR:JH0165
RefSeq:NP_445748.1 UniGene:Rn.94903 ProteinModelPortal:P20781
IntAct:P20781 STRING:P20781 Ensembl:ENSRNOT00000014170 GeneID:25456
KEGG:rno:25456 UCSC:RGD:2706 InParanoid:P20781 BindingDB:P20781
ChEMBL:CHEMBL4126 EvolutionaryTrace:P20781 NextBio:606717
ArrayExpress:P20781 Genevestigator:P20781
GermOnline:ENSRNOG00000010199 Uniprot:P20781
Length = 496
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 126/330 (38%), Positives = 194/330 (58%)
Query: 17 ELESQIGNSDSEKLRLCHKKSATTERLANV-----TQTISQLLHGYDIRLRPNFGGDPLY 71
E S+ G +K LC + + E LA V + +++LL YD R+RPNF G P+
Sbjct: 24 EKSSKKGKG-KKKQYLCPSQQSA-EDLARVPPNSTSNILNRLLVSYDPRIRPNFKGIPVD 81
Query: 72 VGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE---DEVLTLSGDFAEKIWVP 128
V +++ I SF SI E +MDY + ++L Q W D RL S+ + LT+ + +W P
Sbjct: 82 VVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKP 141
Query: 129 DTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEI 188
D FFAN+K++ HDVT+ N L+ + DG + MR + TL+C +DL +P+D Q C +++
Sbjct: 142 DLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQL 201
Query: 189 ESYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTILGHET---NDRKEKLATGTYQRLSLSF 244
ES+GYT D+ W+ PV+ +E+ LPQF I + N K TG Y + + F
Sbjct: 202 ESFGYTTDDLRFIWQSGDPVQ-LEKIALPQFDIKKEDIEYGNCTKYYKGTGYYTCVEVIF 260
Query: 245 KLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSL 304
L+R +G+++ Y P++LIV+LSW+SFWIN +A++ARV + L
Sbjct: 261 TLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAEL 320
Query: 305 PRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
P++SYVKA+D++L+ C +F FA+L+EYA V
Sbjct: 321 PKVSYVKALDVWLIACLLFGFASLVEYAVV 350
>UNIPROTKB|F5HB82 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030534 "adult
behavior" evidence=IEA] [GO:0032590 "dendrite membrane"
evidence=IEA] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IEA] [GO:0060077 "inhibitory synapse" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0005737 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0030424 GO:GO:0007214 GO:GO:0009791
GO:GO:0030534 GO:GO:0005254 KO:K05186 CTD:2566 UniGene:Hs.7195
GeneID:2566 KEGG:hsa:2566 HGNC:HGNC:4087 GenomeRNAi:2566
NextBio:10145 OMA:GFTSQKS EMBL:AC008611 EMBL:AC091926 EMBL:AC091984
IPI:IPI00396250 RefSeq:NP_944493.2 ProteinModelPortal:F5HB82
SMR:F5HB82 PRIDE:F5HB82 Ensembl:ENST00000414552 UCSC:uc010jjc.3
ArrayExpress:F5HB82 Bgee:F5HB82 Uniprot:F5HB82
Length = 515
Score = 315 (115.9 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 56/156 (35%), Positives = 92/156 (58%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
+VT ++ LL GYD +LRP+ G P + D+ + S ++ ++M+YTI ++ Q W D
Sbjct: 65 DVTVILNNLLEGYDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDR 124
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F+S +VL L+ + KIW+PDTFF N K + H +T N+++R+ DG + Y +R
Sbjct: 125 RLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRL 184
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVM 200
T C + LH +P+D +C +E S+ ++ M
Sbjct: 185 TIDAECQLQLHNFPMDEHSCPLEFSSWSRSIAQAGM 220
Score = 300 (110.7 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 60/149 (40%), Positives = 87/149 (58%)
Query: 190 SYGYTVLDVVMYWKETPVR-GVEEA-QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQ 247
S GY ++V WK + V G + +L QF+ +G K +G Y +S+ F L
Sbjct: 250 SDGYPREEIVYQWKRSSVEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLS 309
Query: 248 RNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRI 307
R +GYF QTY+P LIV+LSWVSFWIN +A AR + R SLP++
Sbjct: 310 RRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKV 369
Query: 308 SYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
SYV A+D+++ +CF+FVF+AL+EY ++Y
Sbjct: 370 SYVTAMDLFVSVCFIFVFSALVEYGTLHY 398
>MGI|MGI:95751 [details] [associations]
symbol:Glrb "glycine receptor, beta subunit" species:10090
"Mus musculus" [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0005488
"binding" evidence=IPI] [GO:0005783 "endoplasmic reticulum"
evidence=ISA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=ISO;ISS] [GO:0006821 "chloride transport" evidence=IMP]
[GO:0007218 "neuropeptide signaling pathway" evidence=ISO;ISS]
[GO:0007268 "synaptic transmission" evidence=ISO;ISS] [GO:0007340
"acrosome reaction" evidence=IMP] [GO:0007399 "nervous system
development" evidence=ISO;ISS] [GO:0007601 "visual perception"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0009897 "external side of plasma membrane" evidence=ISA]
[GO:0016020 "membrane" evidence=ISA;IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016594 "glycine binding"
evidence=ISO;ISS;IMP] [GO:0016933 "extracellular-glycine-gated ion
channel activity" evidence=ISO;ISS] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISS;IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034220 "ion transmembrane transport" evidence=IMP] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042391 "regulation of
membrane potential" evidence=IMP] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050905 "neuromuscular process" evidence=IMP] [GO:0051291
"protein heterooligomerization" evidence=ISO] [GO:0060012 "synaptic
transmission, glycinergic" evidence=ISO;IMP] [GO:0060013 "righting
reflex" evidence=IMP] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 MGI:MGI:95751 GO:GO:0005783 GO:GO:0051291
GO:GO:0007399 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0034707 GO:GO:0007628 GO:GO:0001964 EMBL:CH466547
HOVERGEN:HBG051707 GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0060012 CTD:2743
eggNOG:NOG295166 KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29
OMA:PTMFKCL EMBL:U09399 EMBL:X81202 EMBL:X81201 EMBL:L32594
EMBL:AK083251 EMBL:BC037605 IPI:IPI00108776 PIR:S46459
RefSeq:NP_034428.2 UniGene:Mm.275639 ProteinModelPortal:P48168
SMR:P48168 MINT:MINT-4787310 STRING:P48168 PhosphoSite:P48168
PRIDE:P48168 Ensembl:ENSMUST00000029654 GeneID:14658 KEGG:mmu:14658
InParanoid:Q5U5X3 NextBio:286522 Bgee:P48168 CleanEx:MM_GLRB
Genevestigator:P48168 GermOnline:ENSMUSG00000028020 Uniprot:P48168
Length = 496
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 126/330 (38%), Positives = 194/330 (58%)
Query: 17 ELESQIGNSDSEKLRLCHKKSATTERLANV-----TQTISQLLHGYDIRLRPNFGGDPLY 71
E S+ G +K LC + + E LA V + +++LL YD R+RPNF G P+
Sbjct: 24 EKSSKKGKG-KKKQYLCPSQQSP-EDLARVPPNSTSNILNRLLVSYDPRIRPNFKGIPVD 81
Query: 72 VGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE---DEVLTLSGDFAEKIWVP 128
V +++ I SF SI E +MDY + ++L Q W D RL S+ + LT+ + +W P
Sbjct: 82 VVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKP 141
Query: 129 DTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEI 188
D FFAN+K++ HDVT+ N L+ + DG + MR + TL+C +DL +P+D Q C +++
Sbjct: 142 DLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQL 201
Query: 189 ESYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTILGHET---NDRKEKLATGTYQRLSLSF 244
ES+GYT D+ W+ PV+ +E+ LPQF I + N K TG Y + + F
Sbjct: 202 ESFGYTTDDLRFIWQSGDPVQ-LEKIALPQFDIKKEDIEYGNCTKYYKGTGYYTCVEVIF 260
Query: 245 KLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSL 304
L+R +G+++ Y P++LIV+LSW+SFWIN +A++ARV + L
Sbjct: 261 TLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAEL 320
Query: 305 PRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
P++SYVKA+D++L+ C +F FA+L+EYA V
Sbjct: 321 PKVSYVKALDVWLIACLLFGFASLVEYAVV 350
>ZFIN|ZDB-GENE-010410-2 [details] [associations]
symbol:glrba "gylcine receptor, beta a" species:7955
"Danio rerio" [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236
ZFIN:ZDB-GENE-010410-2 GO:GO:0016021 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 HOVERGEN:HBG051707
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 OrthoDB:EOG4HMJ97
PANTHER:PTHR18945:SF29 EMBL:BX284619 EMBL:CU075714 EMBL:AJ404971
IPI:IPI00492685 RefSeq:NP_571856.1 UniGene:Dr.7438
Ensembl:ENSDART00000102790 GeneID:83412 KEGG:dre:83412 CTD:83412
eggNOG:KOG3644 InParanoid:Q9DES8 OMA:GGTPIHV NextBio:20934181
Uniprot:Q9DES8
Length = 498
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 122/337 (36%), Positives = 197/337 (58%)
Query: 6 IIRIPDFNSENELESQIGNSDSEKLRLCHKKSATTERL-ANVTQTI-SQLLHGYDIRLRP 63
++ + F++E + + G + + + +R+ AN T I ++LL YD R+RP
Sbjct: 14 LMLLVQFSAEEGGKPKKGKKGKQVICPSQLSAEDLDRVPANSTSNILNRLLMTYDSRIRP 73
Query: 64 NFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE--DEVLTLSGDF 121
NF G P+ +++ I SF SI E +MDY + ++L Q W D RL ++ + LT+
Sbjct: 74 NFKGIPVEDKVNIFINSFGSIQETTMDYRVNIFLRQRWNDPRLRLPTDFKSDALTVDPKM 133
Query: 122 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDN 181
+ +W PD FFAN+KN+ HDVT+ N L+ + +G + MR + TL+C + L +P+D
Sbjct: 134 FQCLWKPDLFFANEKNANFHDVTQENILLFIFRNGDVLISMRLSVTLSCPLALQLFPMDT 193
Query: 182 QNCTVEIESYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTILGHE---TNDRKEKLATGTY 237
Q C +++ES+GYT D+V W+ PV+ ++E LPQF + + N K TG Y
Sbjct: 194 QYCKMQLESFGYTTKDLVFMWQSGDPVQ-MDEIALPQFDVKQEDIKYANCTKFYPGTGYY 252
Query: 238 QRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXX 297
+ + F L+R +G+++ Y P++LIV+LSW+SFWIN +A++ARV
Sbjct: 253 TCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGILSVLSLSSEC 312
Query: 298 XXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
S LP++SYVKAIDI+++ C ++ FA+L+EYA V
Sbjct: 313 TSLASELPKVSYVKAIDIWMIACLLYGFASLVEYAVV 349
>UNIPROTKB|Q14C71 [details] [associations]
symbol:GLRA1 "GLRA1 protein" species:9606 "Homo sapiens"
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 UniGene:Hs.121490
HGNC:HGNC:4326 EMBL:AC091982 EMBL:AC010312 EMBL:BC114967
IPI:IPI01014809 SMR:Q14C71 STRING:Q14C71 Ensembl:ENST00000545569
UCSC:uc003lus.3 Uniprot:Q14C71
Length = 366
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 111/252 (44%), Positives = 163/252 (64%)
Query: 89 MDYTITMYLNQYWKDDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERN 147
MDY + ++L Q W D RLA++ D+ L L + IW PD FFAN+K + H++T N
Sbjct: 1 MDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDN 60
Query: 148 KLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET-P 206
KL+R++ +G++ Y +R T TLAC MDL +P+D Q C +++ES+GYT+ D++ W+E
Sbjct: 61 KLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGA 120
Query: 207 VRGVEEAQLPQFTILGHETNDR--KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILI 264
V+ + LPQF IL E + R + TG + + F L+R +GY++ Q Y+PS+LI
Sbjct: 121 VQVADGLTLPQF-ILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLI 179
Query: 265 VMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFV 324
V+LSW+SFWIN +A ARV R+SLP++SYVKAIDI++ +C +FV
Sbjct: 180 VILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFV 239
Query: 325 FAALLEYAAVNY 336
F+ALLEYAAVN+
Sbjct: 240 FSALLEYAAVNF 251
>ZFIN|ZDB-GENE-061013-194 [details] [associations]
symbol:gabra1 "gamma-aminobutyric acid (GABA) A
receptor, alpha 1" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
ZFIN:ZDB-GENE-061013-194 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 KO:K05175 CTD:2554
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD EMBL:CR847531 EMBL:CABZ01068465
EMBL:CABZ01068466 EMBL:CABZ01068467 EMBL:CABZ01095604 EMBL:BC124697
IPI:IPI00804069 RefSeq:NP_001070794.1 UniGene:Dr.134090
Ensembl:ENSDART00000100000 GeneID:768183 KEGG:dre:768183
InParanoid:Q08BJ3 NextBio:20918498 Uniprot:Q08BJ3
Length = 459
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 115/294 (39%), Positives = 167/294 (56%)
Query: 47 TQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRL 106
T+ + LL GYD RLRP G V D+ + S +S+ M+YTI ++ Q WKD+RL
Sbjct: 43 TRILDSLLDGYDNRLRPGLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERL 102
Query: 107 AFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTT 166
F VL L+ A KIW PDTFF N K S H++T NKL+R+ +G++ Y MR T
Sbjct: 103 KFKGPMAVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTV 162
Query: 167 TLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGV----EEAQLPQFTILG 222
C M L +P+D C ++ SY YT +VV W + V + ++L Q+ ++G
Sbjct: 163 RAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYVWTRGAAQSVVVADDGSRLNQYDLMG 222
Query: 223 HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+N E+ AR
Sbjct: 223 QSVDSGVVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPAR 282
Query: 283 VAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+SLP+++Y A+D ++ +C+ FVF+AL+E+A VNY
Sbjct: 283 TVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 336
>ZFIN|ZDB-GENE-040801-106 [details] [associations]
symbol:glrbb "glycine receptor, beta b"
species:7955 "Danio rerio" [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA;IMP] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IMP]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236
ZFIN:ZDB-GENE-040801-106 GO:GO:0016021 GO:GO:0034613 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 HOVERGEN:HBG051707
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 eggNOG:NOG295166
KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29 EMBL:CR456621
EMBL:BC078269 EMBL:AB195560 IPI:IPI00486645 RefSeq:NP_001003587.1
UniGene:Dr.83354 SMR:Q6DC22 STRING:Q6DC22
Ensembl:ENSDART00000074685 GeneID:445193 KEGG:dre:445193 CTD:445193
InParanoid:Q6DC22 OMA:QHARITE NextBio:20831954 Uniprot:Q6DC22
Length = 494
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 120/298 (40%), Positives = 180/298 (60%)
Query: 44 ANVTQTI-SQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWK 102
AN T I ++LL YD R+RPNF G P+ +++ I SF SI E +MDY + ++L Q W
Sbjct: 53 ANSTSNILNKLLITYDPRIRPNFKGIPVEDRVNIFINSFGSIQETTMDYRVNIFLRQRWN 112
Query: 103 DDRLAFSSE--DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITY 160
D RL + + LT+ + +W PD FFAN+K++ HDVT+ N L+ + +G +
Sbjct: 113 DPRLRLPQDFKSDSLTVDPKMFKCLWKPDLFFANEKSANFHDVTQENILLFIFRNGDVLI 172
Query: 161 GMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TPVRGVEEAQLPQFT 219
MR + TL+C +DL +P+D Q C +++ES+GYT D+ W+ PV+ ++E LPQF
Sbjct: 173 SMRLSVTLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLQFMWQSGDPVQ-MDEIALPQFD 231
Query: 220 ILGHET---NDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 276
I + N K TG Y + + F L+R +G+++ Y P++LIV+LSW+SFWIN
Sbjct: 232 IKQEDIEYGNCTKYYAGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINP 291
Query: 277 EATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAV 334
+A++ARV S LP++SYVKAIDI+L+ C +F FA+L+EYA V
Sbjct: 292 DASAARVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWLIACLLFGFASLVEYAVV 349
>FB|FBgn0001134 [details] [associations]
symbol:Grd "Glycine receptor" species:7227 "Drosophila
melanogaster" [GO:0015276 "ligand-gated ion channel activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0016933 "extracellular-glycine-gated ion channel activity"
evidence=ISS] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IDA] [GO:0006811
"ion transport" evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 EMBL:AE014296
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0005261
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 EMBL:X78349 PIR:S60749
RefSeq:NP_524131.1 UniGene:Dm.2530 ProteinModelPortal:Q24352
SMR:Q24352 STRING:Q24352 PRIDE:Q24352 EnsemblMetazoa:FBtr0075139
GeneID:39984 KEGG:dme:Dmel_CG7446 CTD:39984 FlyBase:FBgn0001134
GeneTree:ENSGT00540000070314 InParanoid:Q24352 OMA:EVDIMVR
OrthoDB:EOG4W9GKJ PhylomeDB:Q24352 GenomeRNAi:39984 NextBio:816405
Bgee:Q24352 GermOnline:CG7446 GO:GO:0016933 Uniprot:Q24352
Length = 686
Score = 384 (140.2 bits), Expect = 3.0e-56, Sum P(2) = 3.0e-56
Identities = 74/180 (41%), Positives = 105/180 (58%)
Query: 44 ANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKD 103
AN+++ + LL GYD +RP+FGG P + +D+ + S ISEV M Y++ Y Q W D
Sbjct: 107 ANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFRQSWVD 166
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
RLAF + L LS +IW PDT+F N K S+LH +T NK VR+ +G + Y R
Sbjct: 167 KRLAFEGAQDTLALSVSMLARIWKPDTYFYNGKQSYLHTITTPNKFVRIYQNGRVLYSSR 226
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYW-KETP-VRGVEEAQLPQFTIL 221
T C M+L +P+D Q C ++ S+GYT DV+ W KE P V E+ +L QF ++
Sbjct: 227 LTIKAGCPMNLADFPMDIQKCPLKFGSFGYTTSDVIYRWNKERPPVAIAEDMKLSQFDLV 286
Score = 226 (84.6 bits), Expect = 3.0e-56, Sum P(2) = 3.0e-56
Identities = 41/100 (41%), Positives = 63/100 (63%)
Query: 237 YQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXX 296
Y L ++F LQR++G F+ Q Y P L+V+LSWVSFW+N EAT+ RV+
Sbjct: 378 YSMLMVNFHLQRHMGNFLIQVYGPCCLLVVLSWVSFWLNREATADRVSLGITTVLTMTFL 437
Query: 297 XXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
R+ LP++SY A+D ++ + F F+FA +L++A V+Y
Sbjct: 438 GLEARTDLPKVSYPTALDFFVFLSFGFIFATILQFAVVHY 477
>UNIPROTKB|I3LPL5 [details] [associations]
symbol:I3LPL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 EMBL:CU928257
Ensembl:ENSSSCT00000022596 OMA:LRIMEDG Uniprot:I3LPL5
Length = 355
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 120/297 (40%), Positives = 169/297 (56%)
Query: 47 TQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDS-ISE--VSMDYTITMYLNQYWKD 103
T+ + +LL GYD RLRP GG + + T+ ISE ++ +YTI ++ Q WKD
Sbjct: 43 TRILDRLLDGYDNRLRPGLGGS-CWELLAATMEILQGPISEYGITQEYTIDVFFRQSWKD 101
Query: 104 DRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMR 163
+RL F VL L+ A KIW PDTFF N K S H++T NKL+R+ DG++ Y MR
Sbjct: 102 ERLKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMR 161
Query: 164 FTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEAQ----LPQFT 219
T C M L +P+D C ++ SY YT +VV W P R V A+ L Q+
Sbjct: 162 LTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYD 221
Query: 220 ILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEAT 279
+LG + + +TG Y ++ F L+R IGYFV QTYLP I+ V+LS VSFW+N E+
Sbjct: 222 LLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESV 281
Query: 280 SARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR R+SLP+++Y A+D ++ +C+ FVF+AL+E+A VNY
Sbjct: 282 PARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY 338
>FB|FBgn0030707 [details] [associations]
symbol:CG8916 species:7227 "Drosophila melanogaster"
[GO:0004890 "GABA-A receptor activity" evidence=ISS] [GO:0006811
"ion transport" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:AE014298 KO:K05175
GeneTree:ENSGT00540000070314 UniGene:Dm.26639 GeneID:32553
KEGG:dme:Dmel_CG8916 FlyBase:FBgn0030707 GenomeRNAi:32553
NextBio:779103 EMBL:BT022901 RefSeq:NP_573090.3 SMR:Q9VXL9
EnsemblMetazoa:FBtr0301232 UCSC:CG8916-RA InParanoid:Q9VXL9
OMA:ATCPMEL OrthoDB:EOG4573P3 Uniprot:Q9VXL9
Length = 612
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 124/330 (37%), Positives = 182/330 (55%)
Query: 14 SENELESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFG-GDPLYV 72
S+N +S+ R +K+A N++ + LL Y+ P G G P V
Sbjct: 76 SQNATNLSYSSSEISNQRRVRRKAAADMLSRNISMILENLLKRYEQSQLPTHGQGVPTVV 135
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFF 132
++ I S +SE+ MDY++ Y QYW+D RL+F + L+LS +KIW PDT+F
Sbjct: 136 QTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRLSFKGPIKSLSLSIKMLDKIWRPDTYF 195
Query: 133 ANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYG 192
N K+S +H +T NKL+RL+ +G I Y MR T C M+L +P+D Q+C + I SYG
Sbjct: 196 YNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTIKATCPMELQNFPMDRQSCPLVIGSYG 255
Query: 193 YTVLDVVMYWK--ETPVRGVEEAQLPQFTILG--HE--TNDRKEKLATGTYQRLSLSFKL 246
Y ++ WK + V V L QF ++ H T R+E G + L ++F L
Sbjct: 256 YINQQLIYEWKNQDDAVSFVPGMTLNQFDLISMMHRNFTTVRRE----GDFSVLHVAFNL 311
Query: 247 QRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPR 306
+R+ GYF+ Q Y+P ILIV+LSWVSFWI+ EATS RV+ R+ LP+
Sbjct: 312 KRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVSLCVTSVLTLSTISLDSRTDLPK 371
Query: 307 ISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ Y A+D +L+M F++ A LLE+A V+Y
Sbjct: 372 VKYATALDWFLLMSFLYCIATLLEFAGVHY 401
>UNIPROTKB|F1MDL0 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9913
"Bos taurus" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008060
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021 GO:GO:0007399
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0007628 GO:GO:0001964 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0060012 PANTHER:PTHR18945:SF29 OMA:PTMFKCL
EMBL:DAAA02044907 EMBL:DAAA02044902 EMBL:DAAA02044903
EMBL:DAAA02044904 EMBL:DAAA02044905 EMBL:DAAA02044906
IPI:IPI01028074 Ensembl:ENSBTAT00000029010 Uniprot:F1MDL0
Length = 497
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 126/329 (38%), Positives = 193/329 (58%)
Query: 17 ELESQIGNSDSEKLRLCHKKSATTE--RL-ANVTQTI-SQLLHGYDIRLRPNFGGDPLYV 72
E S+ G +K LC + + + R+ AN T I ++LL YD R+RPNF G P+ V
Sbjct: 24 EKSSKKGKG-KKKQYLCPSQQSAEDLARVPANSTSNILNRLLVSYDPRIRPNFKGIPVDV 82
Query: 73 GMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE---DEVLTLSGDFAEKIWVPD 129
+++ I SF SI E +MDY + ++L Q W D RL S+ + LT+ + +W PD
Sbjct: 83 VVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPD 142
Query: 130 TFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIE 189
FFAN+K++ HDVT+ N L+ + DG + MR + TL+C +DL +P+D Q C +++E
Sbjct: 143 LFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLE 202
Query: 190 SYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTILGHETNDRKEKLA-TGT--YQRLSLSFK 245
S+GYT D+ W+ PV+ +E+ LPQF I L GT Y + + F
Sbjct: 203 SFGYTTDDLRFIWQSGDPVQ-LEKIALPQFDIKYEGLKFLGCHLYFKGTWYYTCVEVIFT 261
Query: 246 LQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLP 305
L+R +G+++ Y P++LIV+LSW+SFWIN +A++ARV + LP
Sbjct: 262 LRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLSLASECTTLAAELP 321
Query: 306 RISYVKAIDIYLVMCFVFVFAALLEYAAV 334
++SYVKA+D++L+ C +F FA+L+EYA V
Sbjct: 322 KVSYVKALDVWLIACLLFGFASLVEYAVV 350
>UNIPROTKB|E7EV53 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HGNC:HGNC:4080
EMBL:AC091989 EMBL:AC091944 IPI:IPI00984249
ProteinModelPortal:E7EV53 SMR:E7EV53 Ensembl:ENST00000523217
ArrayExpress:E7EV53 Bgee:E7EV53 Uniprot:E7EV53
Length = 443
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 117/296 (39%), Positives = 164/296 (55%)
Query: 45 NVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDD 104
NV++ + LL GYD RLRP FGG V D+ + SF +S+V M W D+
Sbjct: 31 NVSRILDNLLEGYDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMT----------WTDE 80
Query: 105 RLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRF 164
RL F E+L+L+ KIW PDTFF N K S H++T NKL R+ +G+I Y MR
Sbjct: 81 RLKFGGPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRL 140
Query: 165 TTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVE----EAQLPQFTI 220
T C M L +P+D C ++ SY Y +++ WK+ P+ VE + L Q+ +
Sbjct: 141 TINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDL 200
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
+G + K TG Y +++ F LQR +GYF+ Q Y P I+ V+LS VSFWIN E+
Sbjct: 201 IGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKESVP 260
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
AR R SLP++SY A+D ++ +CF FVF+AL+E+AAVNY
Sbjct: 261 ARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNY 316
>UNIPROTKB|E7EWG0 [details] [associations]
symbol:GABRP "Gamma-aminobutyric acid receptor subunit pi"
species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4089 EMBL:AC008514
IPI:IPI00979633 ProteinModelPortal:E7EWG0 SMR:E7EWG0
Ensembl:ENST00000519385 UCSC:uc011dev.2 ArrayExpress:E7EWG0
Bgee:E7EWG0 Uniprot:E7EWG0
Length = 289
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 110/232 (47%), Positives = 151/232 (65%)
Query: 53 LLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSED 112
L GY+ LRPNFGG+P+ + + L IAS SISE +MDYT T+YL Q W D RL F +
Sbjct: 44 LTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWMDQRLVFEG-N 102
Query: 113 EVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMM 172
+ TL E +WVPDT+ K SFLH+VT N+L+RL +G++ Y +R TTT+AC M
Sbjct: 103 KSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNM 162
Query: 173 DLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE--TPVRGVEEAQLPQFTILGHETNDRKE 230
DL YP+D Q C +++ES+GY DV W VRG+E +L Q+TI + T +
Sbjct: 163 DLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGNDSVRGLEHLRLAQYTIERYFTLVTRS 222
Query: 231 KLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSAR 282
+ TG Y RL L F+L+RN+ YF+ +TY+PS +V+LSWVSFWI+ ++ AR
Sbjct: 223 QQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPAR 274
>UNIPROTKB|A8MWU7 [details] [associations]
symbol:GABRG2 "cDNA FLJ59748, highly similar to
Gamma-aminobutyric-acid receptor gamma-2 subunit" species:9606
"Homo sapiens" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
HOGENOM:HOG000231337 HOVERGEN:HBG051707 UniGene:Hs.7195
HGNC:HGNC:4087 EMBL:AC008611 EMBL:AC091926 EMBL:AC091984
EMBL:AK299640 IPI:IPI00982076 SMR:A8MWU7 STRING:A8MWU7
Ensembl:ENST00000393933 Uniprot:A8MWU7
Length = 372
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 102/261 (39%), Positives = 155/261 (59%)
Query: 78 IASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKN 137
+ S ++ ++M+YTI ++ Q W D RL F+S +VL L+ + KIW+PDTFF N K
Sbjct: 3 VNSIGPVNAINMEYTIDIFFAQTWYDRRLKFNSTIKVLRLNSNMVGKIWIPDTFFRNSKK 62
Query: 138 SFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLD 197
+ H +T N+++R+ DG + Y +R T C + LH +P+D +C +E SYGY +
Sbjct: 63 ADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREE 122
Query: 198 VVMYWKETPVR-GVEEA-QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVF 255
+V WK + V G + +L QF+ +G K +G Y +S+ F L R +GYF
Sbjct: 123 IVYQWKRSSVEVGDTRSWRLYQFSFVGLRNTTEVVKTTSGDYVVMSVYFDLSRRMGYFTI 182
Query: 256 QTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDI 315
QTY+P LIV+LSWVSFWIN +A AR + R SLP++SYV A+D+
Sbjct: 183 QTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDL 242
Query: 316 YLVMCFVFVFAALLEYAAVNY 336
++ +CF+FVF+AL+EY ++Y
Sbjct: 243 FVSVCFIFVFSALVEYGTLHY 263
>FB|FBgn0024963 [details] [associations]
symbol:GluClalpha "GluClalpha" species:7227 "Drosophila
melanogaster" [GO:0008068 "extracellular-glutamate-gated chloride
channel activity" evidence=NAS;IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048812
"neuron projection morphogenesis" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 EMBL:AE014297 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
eggNOG:NOG265706 KO:K05273 EMBL:U58776 EMBL:AJ002232 EMBL:AF297500
EMBL:AF297501 EMBL:DQ665648 RefSeq:NP_001014641.1
RefSeq:NP_001034061.1 RefSeq:NP_650827.2 RefSeq:NP_732447.1
UniGene:Dm.20644 ProteinModelPortal:Q94900 SMR:Q94900
MINT:MINT-813042 STRING:Q94900 TCDB:1.A.9.4.1 PaxDb:Q94900
GeneID:42350 KEGG:dme:Dmel_CG7535 UCSC:CG7535-RA CTD:42350
FlyBase:FBgn0024963 InParanoid:Q94900 OrthoDB:EOG42BVQV
GenomeRNAi:42350 NextBio:828361 Bgee:Q94900 GermOnline:CG7535
GO:GO:0008068 InterPro:IPR015680 PANTHER:PTHR18945:SF26
Uniprot:Q94900
Length = 456
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 109/297 (36%), Positives = 172/297 (57%)
Query: 48 QTISQLLHG--YDIRLRPNF--GGD-PLYVGMDLTIASFDSISEVSMDYTITMYLNQYWK 102
+ + Q+L YD R+RP+ G D P V ++L + S +IS++ M+Y++ + + W
Sbjct: 35 KVLDQILGAGKYDARIRPSGINGTDGPAIVRINLFVRSIMTISDIKMEYSVQLTFREQWT 94
Query: 103 DDRLAFSS-EDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYG 161
D+RL F + + L+ A ++W+PD FF+N+K H++ N +R+ +GS+ Y
Sbjct: 95 DERLKFDDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYS 154
Query: 162 MRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TPVRGVEEAQLPQFTI 220
+R + TLAC M+L YPLD Q C++ + SYG+T D+V WKE PV+ V+ LP+FT+
Sbjct: 155 IRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTL 214
Query: 221 LGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATS 280
T+ K TG Y L + +R Y++ Q Y+P ++V++SWVSFW++ A
Sbjct: 215 EKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVP 274
Query: 281 ARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYS 337
ARV+ +SLP +SY KAID++ +C FVF ALLE+A VNY+
Sbjct: 275 ARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYA 331
>WB|WBGene00000233 [details] [associations]
symbol:avr-15 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0043051 "regulation of
pharyngeal pumping" evidence=IGI;IMP] [GO:0001508 "regulation of
action potential" evidence=IMP] [GO:0031987 "locomotion involved in
locomotory behavior" evidence=IGI;IMP] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0043051 GO:GO:0001508 GO:GO:0031987
GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273 EMBL:Z77668
EMBL:Z81118 CTD:179834 RefSeq:NP_001024076.1
ProteinModelPortal:G5ECH3 SMR:G5ECH3 PRIDE:G5ECH3
EnsemblMetazoa:R11G10.1a GeneID:179834 KEGG:cel:CELE_R11G10.1
WormBase:R11G10.1a OMA:NISYWTH NextBio:907054 Uniprot:G5ECH3
Length = 657
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 108/304 (35%), Positives = 172/304 (56%)
Query: 47 TQTISQLL-HGYDIRLRP-----NFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQY 100
T+ + LL GYD R+RP G P+ V +++ + S I V+M+Y++ + +
Sbjct: 252 TEILEHLLTRGYDHRVRPPGEDGTIHGGPVVVSVNMLLRSISKIDNVNMEYSVQLTFRES 311
Query: 101 WKDDRLAFS----SEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDG 156
W D RL+F ++ + L L+ ++IW+PD+FF N+K ++ H + + N L+R++ DG
Sbjct: 312 WVDKRLSFGVKGDAQPDFLILTA--GQEIWMPDSFFQNEKQAYKHMIDKPNVLIRVHKDG 369
Query: 157 SITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TPVR---GVEE 212
+I Y +R + L+C M L YYP+D Q C +++ SY YT D+ WKE TPV+ G+
Sbjct: 370 TILYSVRISLVLSCPMHLQYYPMDVQQCFIDLASYAYTTKDIEYVWKEETPVQLKAGLSS 429
Query: 213 AQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSF 272
+ LP F + T K TG+Y L +L+R Y++ Q Y+PS ++V++SWVSF
Sbjct: 430 S-LPSFQLTNTSTTYCTSKTNTGSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSF 488
Query: 273 WINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYA 332
WI+ A ARV + LP ++Y+KAID+++ C F+F ALLE+A
Sbjct: 489 WIDRTAVPARVTLGVTTLLTMTTQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALLEFA 548
Query: 333 AVNY 336
V Y
Sbjct: 549 WVTY 552
>WB|WBGene00013914 [details] [associations]
symbol:lgc-37 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:Z93372 KO:K05175
GeneTree:ENSGT00540000070314 EMBL:Z93397 HSSP:P23415 PIR:T18791
RefSeq:NP_499662.2 ProteinModelPortal:G5ECN1 SMR:G5ECN1
IntAct:G5ECN1 EnsemblMetazoa:ZC482.5 GeneID:176694
KEGG:cel:CELE_ZC482.5 CTD:176694 WormBase:ZC482.5 OMA:NIAGGLY
NextBio:893624 Uniprot:G5ECN1
Length = 483
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 112/321 (34%), Positives = 175/321 (54%)
Query: 26 DSEKLRLCHKKSATTERLAN-VTQTISQLLHGYDIRLRP-NFGGDPLYVGMDLTIASFDS 83
D ++ RL + + + L T+ + +L D RP N PL V +D++I S
Sbjct: 23 DMKRQRLSSRSTTYNQTLIRYTTKVLDTILLNQDKNFRPVNPDNSPLQVEVDISIRSMGP 82
Query: 84 ISEVSMDYTITMYLNQYWKDDRLAFS----SEDEVLTLSGDFAEKIWVPDTFFANDKNSF 139
+SE +M++++ Y Q W D RLAF+ S+ E+ L+ + IW+PDT+ N + S+
Sbjct: 83 VSEQNMEFSLDCYFRQKWLDRRLAFTPINPSKPEI-PLASKMLKDIWIPDTYIRNGRKSY 141
Query: 140 LHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVV 199
LH +T N L R+ DG + R T C M L +P+D Q C +E+ S GY DVV
Sbjct: 142 LHTLTVPNILFRVRSDGQVHVSQRLTIRSRCQMFLKKFPMDTQACPIEVGSLGYFSKDVV 201
Query: 200 MYWKETPVRGVEEAQLPQFTILGHETNDRKE---KLATGTYQRLSLSFKLQRNIGYFVFQ 256
WK+ + L Q+ +L ++R + + L++ FKLQR GY++ Q
Sbjct: 202 YKWKDVELDAKMGNTLSQYQVLSLSKSERNVSDFRFSDRNISVLNVYFKLQRQQGYYILQ 261
Query: 257 TYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIY 316
Y P L+V++SWVSFWIN EA+ ARV+ R+ LP++S+ A+D+Y
Sbjct: 262 IYTPCTLVVVMSWVSFWINKEASPARVSLGIMTVLSMSTIGFGLRTDLPKVSHSTALDVY 321
Query: 317 LVMCFVFVFAALLEYAAVNYS 337
++ CFVF+FAA++EYA +NY+
Sbjct: 322 ILTCFVFLFAAMVEYAVINYA 342
>UNIPROTKB|E7ET93 [details] [associations]
symbol:GABRE "Gamma-aminobutyric acid receptor subunit
epsilon" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
HGNC:HGNC:4085 ChiTaRS:GABRE EMBL:AF274855 IPI:IPI00647456
ProteinModelPortal:E7ET93 SMR:E7ET93 Ensembl:ENST00000370325
ArrayExpress:E7ET93 Bgee:E7ET93 Uniprot:E7ET93
Length = 365
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 101/323 (31%), Positives = 179/323 (55%)
Query: 18 LESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLT 77
LE+Q+ + +++ + + +L ++ ++ +L YD +LRP G P V ++++
Sbjct: 45 LENQLLSEETKSTET--ETGSRVGKLPEASRILNTILSNYDHKLRPGIGEKPTVVTVEIS 102
Query: 78 IASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKN 137
+ S +S + M+YTI + +Q W D+RL ++ E L L+G+ ++W+PDTFF N K
Sbjct: 103 VNSLGPLSILDMEYTIDIIFSQTWYDERLCYNDTFESLVLNGNVVSQLWIPDTFFRNSKR 162
Query: 138 SFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLD 197
+ H++T N++VR+ DG + Y +R T C + + +P+D+ +C + S+ Y +
Sbjct: 163 THEHEITMPNQMVRIYKDGKVLYTIRMTIDAGCSLHMLRFPMDSHSCPLSFSSFSYPENE 222
Query: 198 VVMYWKETPVRGVEEA--QLPQFTILGHETNDRKEKLAT--GTYQRLSLSFKLQRNIGYF 253
++ W+ + E+ +L QF G +++ E + T G + +++ F + R GY
Sbjct: 223 MIYKWENFKLEINEKNSWKLFQFDFTG--VSNKTEIITTPVGDFMVMTIFFNVSRRFGYV 280
Query: 254 VFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAI 313
FQ Y+PS + MLSWVSFWI E+ AR + R + PR+SY+ A+
Sbjct: 281 AFQNYVPSSVTTMLSWVSFWIKTESAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITAL 340
Query: 314 DIYLVMCFVFVFAALLEYAAVNY 336
D Y+ +CFVF F ALLE+A +N+
Sbjct: 341 DFYIAICFVFCFCALLEFAVLNF 363
>UNIPROTKB|P78334 [details] [associations]
symbol:GABRE "Gamma-aminobutyric acid receptor subunit
epsilon" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008099
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01723 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006810
GO:GO:0034707 GO:GO:0005254 HOGENOM:HOG000231337 HOVERGEN:HBG051707
EMBL:U66661 EMBL:Y09763 EMBL:Y09764 EMBL:Y09765 EMBL:Y07637
EMBL:U92283 EMBL:U92281 EMBL:U92282 IPI:IPI00297725
RefSeq:NP_004952.2 UniGene:Hs.22785 ProteinModelPortal:P78334
SMR:P78334 STRING:P78334 PhosphoSite:P78334 DMDM:13124728
PRIDE:P78334 DNASU:2564 Ensembl:ENST00000370328 GeneID:2564
KEGG:hsa:2564 UCSC:uc004ffi.3 CTD:2564 GeneCards:GC0XM151121
HGNC:HGNC:4085 HPA:HPA045918 MIM:300093 neXtProt:NX_P78334
PharmGKB:PA28499 eggNOG:NOG259781 InParanoid:P78334 KO:K05185
OMA:LYTIRMT OrthoDB:EOG4J9MZV PhylomeDB:P78334 BindingDB:P78334
ChEMBL:CHEMBL4635 ChiTaRS:GABRE GenomeRNAi:2564 NextBio:10131
ArrayExpress:P78334 Bgee:P78334 CleanEx:HS_GABRE
Genevestigator:P78334 GermOnline:ENSG00000102287 Uniprot:P78334
Length = 506
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 101/323 (31%), Positives = 179/323 (55%)
Query: 18 LESQIGNSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLT 77
LE+Q+ + +++ + + +L ++ ++ +L YD +LRP G P V ++++
Sbjct: 45 LENQLLSEETKSTET--ETGSRVGKLPEASRILNTILSNYDHKLRPGIGEKPTVVTVEIS 102
Query: 78 IASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKN 137
+ S +S + M+YTI + +Q W D+RL ++ E L L+G+ ++W+PDTFF N K
Sbjct: 103 VNSLGPLSILDMEYTIDIIFSQTWYDERLCYNDTFESLVLNGNVVSQLWIPDTFFRNSKR 162
Query: 138 SFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLD 197
+ H++T N++VR+ DG + Y +R T C + + +P+D+ +C + S+ Y +
Sbjct: 163 THEHEITMPNQMVRIYKDGKVLYTIRMTIDAGCSLHMLRFPMDSHSCPLSFSSFSYPENE 222
Query: 198 VVMYWKETPVRGVEEA--QLPQFTILGHETNDRKEKLAT--GTYQRLSLSFKLQRNIGYF 253
++ W+ + E+ +L QF G +++ E + T G + +++ F + R GY
Sbjct: 223 MIYKWENFKLEINEKNSWKLFQFDFTG--VSNKTEIITTPVGDFMVMTIFFNVSRRFGYV 280
Query: 254 VFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAI 313
FQ Y+PS + MLSWVSFWI E+ AR + R + PR+SY+ A+
Sbjct: 281 AFQNYVPSSVTTMLSWVSFWIKTESAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITAL 340
Query: 314 DIYLVMCFVFVFAALLEYAAVNY 336
D Y+ +CFVF F ALLE+A +N+
Sbjct: 341 DFYIAICFVFCFCALLEFAVLNF 363
>UNIPROTKB|F1MU41 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
OMA:LYTIRMT EMBL:DAAA02068166 IPI:IPI00698565
Ensembl:ENSBTAT00000018017 Uniprot:F1MU41
Length = 508
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 101/307 (32%), Positives = 167/307 (54%)
Query: 34 HKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTI 93
HKK ++ T+ + + H YD +LRP G P V ++L++ + +S + M+YTI
Sbjct: 62 HKKLG---KMPTATEILDGIFHNYDYKLRPGIGERPTVVTVELSVNTLGPLSIMDMEYTI 118
Query: 94 TMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
+ Q W D+RL F+ E LSG+ +WVPDTFF N K ++ H +T N++VR++
Sbjct: 119 DITFCQTWYDERLRFNGSFESFVLSGNLVSLLWVPDTFFRNSKRTYEHSITMPNQMVRIH 178
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA 213
DG + Y +R T C + + +P+D+ +C + S+ Y D++ W+ ++ + E+
Sbjct: 179 KDGKVLYTIRMTIEAGCSLHMLKFPMDSHSCPLSFSSFSYPENDLIYKWENFMLK-INES 237
Query: 214 ---QLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
+L QF G T + LA G + ++L F + R G+ F Y+PS + M+SW
Sbjct: 238 NSWKLFQFDFTGVSNTTETVTTLA-GDFIVMTLYFNVSRRFGFVAFHNYVPSSVTTMVSW 296
Query: 270 VSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
+SFWI E+ AR + R + PR+SY+ A+D Y+ +CFVF F AL+
Sbjct: 297 ISFWIKKESAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALM 356
Query: 330 EYAAVNY 336
E+A +N+
Sbjct: 357 EFAVLNF 363
>UNIPROTKB|G3MWU9 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
EMBL:DAAA02068166 Ensembl:ENSBTAT00000065531 Uniprot:G3MWU9
Length = 495
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 101/307 (32%), Positives = 167/307 (54%)
Query: 34 HKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTI 93
HKK ++ T+ + + H YD +LRP G P V ++L++ + +S + M+YTI
Sbjct: 63 HKKLG---KMPTATEILDGIFHNYDYKLRPGIGERPTVVTVELSVNTLGPLSIMDMEYTI 119
Query: 94 TMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLN 153
+ Q W D+RL F+ E LSG+ +WVPDTFF N K ++ H +T N++VR++
Sbjct: 120 DITFCQTWYDERLRFNGSFESFVLSGNLVSLLWVPDTFFRNSKRTYEHSITMPNQMVRIH 179
Query: 154 GDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA 213
DG + Y +R T C + + +P+D+ +C + S+ Y D++ W+ ++ + E+
Sbjct: 180 KDGKVLYTIRMTIEAGCSLHMLKFPMDSHSCPLSFSSFSYPENDLIYKWENFMLK-INES 238
Query: 214 ---QLPQFTILG-HETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSW 269
+L QF G T + LA G + ++L F + R G+ F Y+PS + M+SW
Sbjct: 239 NSWKLFQFDFTGVSNTTETVTTLA-GDFIVMTLYFNVSRRFGFVAFHNYVPSSVTTMVSW 297
Query: 270 VSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALL 329
+SFWI E+ AR + R + PR+SY+ A+D Y+ +CFVF F AL+
Sbjct: 298 ISFWIKKESAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALM 357
Query: 330 EYAAVNY 336
E+A +N+
Sbjct: 358 EFAVLNF 364
>UNIPROTKB|I3L720 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030424 "axon" evidence=IEA] [GO:0030285 "integral to
synaptic vesicle membrane" evidence=IEA] [GO:0008503
"benzodiazepine receptor activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0006836 "neurotransmitter transport" evidence=IEA] [GO:0001505
"regulation of neurotransmitter levels" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0001505 GO:GO:0006821
GeneTree:ENSGT00550000074441 GO:GO:0008503 OMA:TTAEPNK
EMBL:FP312872 EMBL:CU861582 Ensembl:ENSSSCT00000023000
Uniprot:I3L720
Length = 367
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 102/252 (40%), Positives = 144/252 (57%)
Query: 89 MDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNK 148
M+YTI ++ Q WKD+RL F +L L+ A KIW PDTFF N K S H++T NK
Sbjct: 1 MEYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNK 60
Query: 149 LVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR 208
L+R+ DG++ Y MR T C M L +P+D +C ++ SY YT +V W
Sbjct: 61 LLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASD 120
Query: 209 GVEEA----QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILI 264
V+ A +L Q+ +LG K +TG Y ++ F L+R IGYFV QTYLP I+
Sbjct: 121 SVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMT 180
Query: 265 VMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFV 324
V+LS VSFW+N E+ AR R+SLP+++Y A+D ++ +C+ FV
Sbjct: 181 VILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFV 240
Query: 325 FAALLEYAAVNY 336
F+AL+E+A VNY
Sbjct: 241 FSALIEFATVNY 252
>UNIPROTKB|B7Z1H8 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HOGENOM:HOG000231337
HOVERGEN:HBG051707 UniGene:Hs.116250 HGNC:HGNC:4076 ChiTaRS:GABRA2
EMBL:AC084352 EMBL:AC093745 EMBL:AC095060 EMBL:AC104072
EMBL:AK293466 IPI:IPI00922092 SMR:B7Z1H8 STRING:B7Z1H8
Ensembl:ENST00000540012 UCSC:uc011bzc.1 Uniprot:B7Z1H8
Length = 456
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 105/265 (39%), Positives = 148/265 (55%)
Query: 76 LTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFAND 135
+TI D E +YTI ++ Q WKD+RL F +L L+ A KIW PDTFF N
Sbjct: 20 VTIIGLDQDWE---EYTIDVFFRQKWKDERLKFKGPMNILRLNNLMASKIWTPDTFFHNG 76
Query: 136 KNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTV 195
K S H++T NKL+R+ DG++ Y MR T C M L +P+D +C ++ SY YT
Sbjct: 77 KKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTT 136
Query: 196 LDVVMYWKETPVRGVEEA----QLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIG 251
+V W V+ A +L Q+ +LG K +TG Y ++ F L+R IG
Sbjct: 137 SEVTYIWTYNASDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIG 196
Query: 252 YFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVK 311
YFV QTYLP I+ V+LS VSFW+N E+ AR R+SLP+++Y
Sbjct: 197 YFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYAT 256
Query: 312 AIDIYLVMCFVFVFAALLEYAAVNY 336
A+D ++ +C+ FVF+AL+E+A VNY
Sbjct: 257 AMDWFIAVCYAFVFSALIEFATVNY 281
>UNIPROTKB|F1S2D3 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
OMA:LYTIRMT EMBL:FP074856 Ensembl:ENSSSCT00000013944 Uniprot:F1S2D3
Length = 506
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 98/299 (32%), Positives = 162/299 (54%)
Query: 42 RLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYW 101
+L T + +L+ YD +LRP G P V ++L++ + IS + M+YTI + Q W
Sbjct: 68 KLPAATHILDSILNNYDYKLRPGIGERPTVVTVELSVNTLGPISILDMEYTIDITFYQTW 127
Query: 102 KDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYG 161
D+RL ++ E L+G+ +WVPDTFF N K + H +T N++VR+ DG + Y
Sbjct: 128 YDERLRYNGSFESFVLNGNLVSLLWVPDTFFRNSKRTQEHSITMPNQMVRIYKDGKVLYT 187
Query: 162 MRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVRGVEEA--QLPQFT 219
+R T C + + +P+D+ +C + S+ Y V D++ W + E +L QF
Sbjct: 188 IRMTIDAGCSLHMVKFPMDSHSCPLSFSSFSYPVSDIIYKWDNFTLEINENNSWKLFQFD 247
Query: 220 ILGHETNDRKEKLAT--GTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHE 277
G ++ E +AT G + ++L F + R G+ FQ Y+PS + M+SW+SFW+ +
Sbjct: 248 FTG--VSNSTETIATLAGDFMVMTLFFNVSRRFGFVAFQNYVPSSVTTMISWISFWLKKD 305
Query: 278 ATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
+ AR + R + PR+SY+ A+D Y+ +CFVF F AL+E+A +N+
Sbjct: 306 SAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALMEFAVLNF 364
>WB|WBGene00001591 [details] [associations]
symbol:glc-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0031987 "locomotion
involved in locomotory behavior" evidence=IGI;IMP]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0031987
GeneTree:ENSGT00630000089685 KO:K05273 EMBL:Z92830 EMBL:U14524
PIR:S50864 PIR:T20754 RefSeq:NP_507090.1 UniGene:Cel.18023
ProteinModelPortal:G5EBR3 SMR:G5EBR3 EnsemblMetazoa:F11A5.10
GeneID:180086 KEGG:cel:CELE_F11A5.10 CTD:180086 WormBase:F11A5.10
OMA:DEINMEY ChEMBL:CHEMBL4410 NextBio:908030 Uniprot:G5EBR3
Length = 461
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 102/291 (35%), Positives = 165/291 (56%)
Query: 56 GYDIRLRP-NFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSE--- 111
GYD R+RP G P+ V +++ + + I V+M+Y+ + L + W D RL++ +
Sbjct: 74 GYDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESWIDKRLSYGVKGDG 133
Query: 112 --DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLA 169
D V+ G +IW+PDTFF N+K ++ H + + N L+R++ DG++ Y +R + L+
Sbjct: 134 QPDFVILTVG---HQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLS 190
Query: 170 CMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKE-TPVR---GVEEAQLPQFTILGHET 225
C M L YYP+D Q C++++ SY YT D+ WKE +P++ G+ + LP F + T
Sbjct: 191 CPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSS-LPSFQLTNTST 249
Query: 226 NDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAX 285
TG Y L + +L+R +++ Q Y+PS ++V++SWVSFW + A ARV
Sbjct: 250 TYCTSVTNTGIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTL 309
Query: 286 XXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
S LP +SY+KAID+++ C F+F ALLE+A VN+
Sbjct: 310 GVTTLLTMTAQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALLEFALVNH 360
>UNIPROTKB|E2QVM5 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
CTD:2564 KO:K05185 OMA:LYTIRMT EMBL:AAEX03027052 RefSeq:XP_549340.3
Ensembl:ENSCAFT00000030414 GeneID:492220 KEGG:cfa:492220
NextBio:20864837 Uniprot:E2QVM5
Length = 488
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 102/314 (32%), Positives = 177/314 (56%)
Query: 31 RLCHKKSATTERLANV---TQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEV 87
+L +++ +T RL N+ T ++ +L+ YD +LRP G P V ++L++ + IS +
Sbjct: 48 KLLSEETKSTMRLGNLPAATHILNSILNNYDHKLRPGIGERPTVVTVELSVNTLGPISIM 107
Query: 88 SMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERN 147
M+YTI + Q W D+RL ++ E L+G+ ++W+PDT F N K + H +T N
Sbjct: 108 DMEYTIDITFCQTWYDERLRYNGSFESFVLNGNMVSQLWIPDTVFRNSKRTQEHVITMPN 167
Query: 148 KLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPV 207
++VR++ DG + Y +R T C++ + +P+D+ +C + S+ Y +++ W+ +
Sbjct: 168 QMVRIHKDGKVLYTIRMTIDAGCLLYMLKFPMDSHSCPLSFSSFSYPESEMIYKWENFKL 227
Query: 208 RGVEEA---QLPQFTILGHETNDRKEKLAT--GTYQRLSLSFKLQRNIGYFVFQTYLPSI 262
+ ++E +L QF G TN E ++T G + ++L F + R G+ FQ Y+PS
Sbjct: 228 Q-IDERNTWKLFQFDFTG-VTNTT-ETISTPAGDFTVMTLYFNVSRRFGFVAFQNYVPSS 284
Query: 263 LIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFV 322
+ MLSWVSFWI ++ AR + R + PR+SY+ A+D Y+ +CFV
Sbjct: 285 VTTMLSWVSFWIKRDSAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFV 344
Query: 323 FVFAALLEYAAVNY 336
F F AL+E+A +N+
Sbjct: 345 FCFCALMEFAVLNF 358
>WB|WBGene00001593 [details] [associations]
symbol:glc-3 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0031987 "locomotion
involved in locomotory behavior" evidence=IMP] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR007110 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 PROSITE:PS50835
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0031987
GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273 EMBL:AJ243914
EMBL:FO081092 PIR:T29742 RefSeq:NP_504441.1 UniGene:Cel.18004
ProteinModelPortal:G5EEZ3 SMR:G5EEZ3 EnsemblMetazoa:ZC317.3
GeneID:178930 KEGG:cel:CELE_ZC317.3 CTD:178930 WormBase:ZC317.3
OMA:IPSTMLV NextBio:903170 Uniprot:G5EEZ3
Length = 484
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 113/308 (36%), Positives = 170/308 (55%)
Query: 47 TQTISQLL-HGYDIRLRP---------NFGGDPLYVGMDLTIASFDSISEVSMDYTITMY 96
T+ I +LL GYD R+RP G +YV M I S I +V+M+Y++ +
Sbjct: 28 TEIIKKLLGKGYDWRVRPPGINLTIPGTHGAVIVYVNM--LIRSISKIDDVNMEYSVQLT 85
Query: 97 LNQYWKDDRLAFS----SEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRL 152
+ W D RLA+ S + L L+ ++IW+PD+FF N+K + HD+ + N L+R+
Sbjct: 86 FREEWVDGRLAYGFPGDSTPDFLILTA--GQQIWMPDSFFQNEKQAHKHDIDKPNVLIRI 143
Query: 153 NGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PV---R 208
+ DG I Y +R + L+C M L YYP+D Q C +++ SY YT D+ WK+T PV +
Sbjct: 144 HRDGRILYSVRISMVLSCPMHLQYYPMDVQTCLIDLASYAYTENDIEYRWKKTDPVQLKK 203
Query: 209 GVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLS 268
G+ + LP F + +T K TGTY L +L+R Y++ Q Y+PS ++V++S
Sbjct: 204 GLHSS-LPSFELNNVDTTLCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIPSTMLVIVS 262
Query: 269 WVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAAL 328
WVSFW++ A ARV + LP +SY KAID+++ C F+F AL
Sbjct: 263 WVSFWLDRGAVPARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGACLTFIFGAL 322
Query: 329 LEYAAVNY 336
LE+A V Y
Sbjct: 323 LEFAWVTY 330
>UNIPROTKB|F1NXB3 [details] [associations]
symbol:F1NXB3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
EMBL:AADN02031281 IPI:IPI00591094 ProteinModelPortal:F1NXB3
Ensembl:ENSGALT00000022965 Uniprot:F1NXB3
Length = 382
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 108/246 (43%), Positives = 151/246 (61%)
Query: 90 DYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKL 149
DYT+TMY Q W++ RL +S LTL A+ +WV DT+F NDKNSF+ V + +
Sbjct: 1 DYTLTMYFQQSWREKRLPYSGISLNLTLDNRAADHLWVSDTYFQNDKNSFVQGVMVK-QT 59
Query: 150 VRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPV 207
++ + DG++ YG+R TT ACMMDLH YPLD QNCT+EI S GYT D+ YW ++ V
Sbjct: 60 IQYHPDGTVLYGLRITTA-ACMMDLHRYPLDEQNCTLEIYSNGYTTNDIEFYWNGGKSAV 118
Query: 208 RGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVML 267
GV +LPQF+I+ ++T ++ + TGTY +LSLSF L+RN GYF QT++PS LI +L
Sbjct: 119 TGVSNIELPQFSIVDYKTVSKRVEFPTGTYPQLSLSFWLKRNTGYFTLQTHMPSTLITIL 178
Query: 268 SWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSS-LPRISYVKAIDIYLVMCFVFVFA 326
S VSFWIN +A++ARVA S L K I + +++++
Sbjct: 179 SRVSFWIN-DASAARVALGITTVLTMTTISTHLLSQMLGFFPQTKFKQITSTLPYIYIYL 237
Query: 327 ALLEYA 332
L+YA
Sbjct: 238 FKLDYA 243
>UNIPROTKB|B7Z279 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00253 PRINTS:PR01160 GO:GO:0016021 GO:GO:0005886
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG051707 HOGENOM:HOG000231335 OrthoDB:EOG45756F
UniGene:Hs.303527 HGNC:HGNC:4082 EMBL:AC008712 EMBL:AC022120
EMBL:AC091882 EMBL:AC091989 EMBL:AK294437 IPI:IPI00975760
SMR:B7Z279 STRING:B7Z279 Ensembl:ENST00000517547 UCSC:uc011deh.1
Uniprot:B7Z279
Length = 314
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 98/171 (57%), Positives = 125/171 (73%)
Query: 171 MMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWK--ETPVRGVEEAQLPQFTILGHETNDR 228
MMDL YPLD QNCT+EIESYGYT D+ YW+ + V GV + +LPQF+I+ ++ +
Sbjct: 1 MMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSIVDYKLITK 60
Query: 229 KEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXX 288
K +TG+Y RLSLSFKL+RNIGYF+ QTY+PSILI +LSWVSFWIN++A++ARVA
Sbjct: 61 KVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGIT 120
Query: 289 XXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNYSYW 339
R +LP+I YVKAID+YL+ CFVFVF ALLEYA VNY ++
Sbjct: 121 TVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFMALLEYALVNYIFF 171
>WB|WBGene00000232 [details] [associations]
symbol:avr-14 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0042493
"response to drug" evidence=IGI] [GO:0031987 "locomotion involved
in locomotory behavior" evidence=IGI;IMP] [GO:0043051 "regulation
of pharyngeal pumping" evidence=IGI;IMP] [GO:0008144 "drug binding"
evidence=IGI] [GO:0008068 "extracellular-glutamate-gated chloride
channel activity" evidence=IDA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0016020 GO:GO:0042493 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043051 EMBL:FO080115
GO:GO:0031987 GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273
GO:GO:0008068 GeneID:172270 KEGG:cel:CELE_B0207.12 UCSC:B0207.12a
CTD:172270 NextBio:874763 RefSeq:NP_001020963.1
ProteinModelPortal:Q95Q97 SMR:Q95Q97 PRIDE:Q95Q97
EnsemblMetazoa:B0207.12b WormBase:B0207.12b InParanoid:Q95Q97
ArrayExpress:Q95Q97 Uniprot:Q95Q97
Length = 430
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 103/290 (35%), Positives = 165/290 (56%)
Query: 63 PNFGGDPLYVGMDLTIASFDSISEVSMDYTITMYLNQYWKDDRLAFSSEDE--------- 113
P+ GG P+ V +++ + S I +V+M+Y+ + W D RLA+ +E
Sbjct: 52 PDTGG-PVLVTVNIYLRSISKIDDVNMEYSAQFTFREEWTDQRLAYERYEESGDTEVPPF 110
Query: 114 -VLTLS--GDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLAC 170
VL S D +++IW+PDTFF N+K + H + + N L+R++ +G I Y +R + L+C
Sbjct: 111 VVLATSENADQSQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRLSLVLSC 170
Query: 171 MMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVR---GVEEAQLPQFTILGHETN 226
M L +YPLD QNC +++ SY YT D+ WKE P++ G+ ++ LP F + T+
Sbjct: 171 PMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKEKKPIQQKDGLRQS-LPSFELQDVVTD 229
Query: 227 DRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAXX 286
TG Y + +L+R Y++ Q Y+P I++V++SWVSFW++ +A ARV+
Sbjct: 230 YCTSLTNTGEYSCARVVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLG 289
Query: 287 XXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAAVNY 336
S LP +SY+KA+D+++ +C F+F ALLEYA VNY
Sbjct: 290 VTTLLTMTTQASGINSKLPPVSYIKAVDVWIGVCLAFIFGALLEYAVVNY 339
>FB|FBgn0003011 [details] [associations]
symbol:ort "ora transientless" species:7227 "Drosophila
melanogaster" [GO:0019182 "histamine-gated chloride channel
activity" evidence=ISS;NAS] [GO:0019183 "histamine-gated chloride
channel complex" evidence=NAS] [GO:0007268 "synaptic transmission"
evidence=IMP] [GO:0045472 "response to ether" evidence=IMP]
[GO:0009636 "response to toxic substance" evidence=IMP] [GO:0030534
"adult behavior" evidence=IMP] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0043052
"thermotaxis" evidence=IMP] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0007268
GO:GO:0009636 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030534 GO:GO:0043052
GO:GO:0045472 eggNOG:NOG295166 InterPro:IPR015680
PANTHER:PTHR18945:SF26 ChiTaRS:oc EMBL:AY672639
ProteinModelPortal:A1KYB3 SMR:A1KYB3 STRING:A1KYB3 PRIDE:A1KYB3
FlyBase:FBgn0003011 InParanoid:A1KYB3 OrthoDB:EOG4F4QSD Bgee:A1KYB3
GO:GO:0019182 Uniprot:A1KYB3
Length = 485
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 108/305 (35%), Positives = 163/305 (53%)
Query: 34 HKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTI 93
+ K + LA +T + + + YD P G P V +T+ DSI E SM Y
Sbjct: 18 YAKGEFQQSLA-ITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVA 76
Query: 94 TMYLNQYWKDDRLAFSSE--DEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVR 151
++ Q WKD RL E L D+ + +W PD+FF N K+ +T N +
Sbjct: 77 DVFFAQTWKDHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMW 136
Query: 152 LNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKET-PVRGV 210
L D +I Y ++ T L+C+M+ YP D Q C +++ES +T D++ W T P+
Sbjct: 137 LYKDKTILYMVKLTLKLSCIMNFAIYPHDTQECKLQVESLSHTTDDLIFQWDPTTPLVVD 196
Query: 211 EEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
E +LPQ ++ +ET D + +TG + L + F L+R + Y+VF TY+P+ +IV++SWV
Sbjct: 197 ENIELPQVALIRNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWV 256
Query: 271 SFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWI EA ARV +SSLP +SY+KA+D ++ +C VFVF AL+E
Sbjct: 257 SFWIKPEAAPARVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALME 316
Query: 331 YAAVN 335
Y +N
Sbjct: 317 YCLIN 321
>WB|WBGene00001594 [details] [associations]
symbol:glc-4 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:FO080695 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231336 RefSeq:NP_495489.2 ProteinModelPortal:Q95QT7
SMR:Q95QT7 PaxDb:Q95QT7 EnsemblMetazoa:C27H5.8 GeneID:182971
KEGG:cel:CELE_C27H5.8 UCSC:C27H5.8 CTD:182971 WormBase:C27H5.8
eggNOG:NOG238729 InParanoid:Q95QT7 OMA:HEGANGA NextBio:919482
Uniprot:Q95QT7
Length = 500
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 111/325 (34%), Positives = 164/325 (50%)
Query: 31 RLCHKKSATTERLANVTQTISQLLHGYDIRLRP------NFGGDPLYVGMDLTIASFDSI 84
R + T + T+ LL YD +RP N + V L I S ++
Sbjct: 29 RTAFSRHTTNYQAWREQMTVCDLLQDYDAAVRPSGRTPYNDTRGAVMVTTSLNIRSISAV 88
Query: 85 SEVSMDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFA----------EKIWVPDTFFAN 134
SE +M++ Q W DDRL F E + L LS D+ + +W+PDTFF N
Sbjct: 89 SEKNMEFVAQFRFRQEWYDDRLRFI-EHQGL-LSSDYRNFEFIHVARDQSLWIPDTFFQN 146
Query: 135 DKNSFLHDVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYT 194
+KN + H + + N+ +++ DG + Y R T LAC M L YP+D+QNC + SY YT
Sbjct: 147 EKNGWYHMLNQENRFLKIRSDGKLIYDRRLTLHLACSMHLSRYPMDHQNCEIAFASYAYT 206
Query: 195 VLDVVMYWKETPVRGVEEAQ---LPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIG 251
D+ W + P + E LP F I + K TGTY L + +L R
Sbjct: 207 TADIEYIW-DVPAIQIHEGANGALPNFEIASFKNASCTSKTNTGTYSCLKVEIRLNRVFS 265
Query: 252 YFVFQTYLPSILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVK 311
+F+ Q Y+PS ++V ++WVS+WI+ ++T+ARV S+LP +SY K
Sbjct: 266 FFLLQLYIPSSMLVGVAWVSYWIDWKSTAARVPLAIVTLLTMITTSHAINSNLPPVSYAK 325
Query: 312 AIDIYLVMCFVFVFAALLEYAAVNY 336
+IDI++ C VF+F +L+EYA VNY
Sbjct: 326 SIDIWVGACVVFIFFSLIEYAVVNY 350
>UNIPROTKB|F1P9P9 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:THANLNM
EMBL:AAEX03009036 Ensembl:ENSCAFT00000037915 Uniprot:F1P9P9
Length = 465
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 97/252 (38%), Positives = 144/252 (57%)
Query: 89 MDYTITMYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNK 148
M+YT+ ++ Q W D RL + E+L L+ K+W PDTFF N K S H++T NK
Sbjct: 1 MEYTMDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNK 60
Query: 149 LVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR 208
L R+ +G+I Y MR T + C M L +P+D C ++ SY Y +++ W + P +
Sbjct: 61 LFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEK 120
Query: 209 GVE----EAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILI 264
VE + L Q+ ++G + K TG Y +++ F L+R +GYF+ QTY+P I+
Sbjct: 121 SVEVPKESSSLVQYDLVGQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMT 180
Query: 265 VMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFV 324
V+LS VSFWIN E+ AR R SLP++SY A+D ++ +CF FV
Sbjct: 181 VILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFV 240
Query: 325 FAALLEYAAVNY 336
F+AL+E+AAVNY
Sbjct: 241 FSALIEFAAVNY 252
>RGD|68320 [details] [associations]
symbol:Gabre "gamma-aminobutyric acid (GABA) A receptor, epsilon"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=TAS] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IDA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEP] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008099 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01723 PROSITE:PS00236 RGD:68320 GO:GO:0005886 GO:GO:0042493
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707 GO:GO:0005254
GO:GO:0006821 HOVERGEN:HBG051707 EMBL:AF255612 EMBL:U92284
IPI:IPI00191361 UniGene:Rn.54455 ProteinModelPortal:Q9ES14
PRIDE:Q9ES14 eggNOG:NOG148905 BindingDB:Q9ES14 ChEMBL:CHEMBL306
ArrayExpress:Q9ES14 Genevestigator:Q9ES14 Uniprot:Q9ES14
Length = 506
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 98/306 (32%), Positives = 165/306 (53%)
Query: 39 TTER----LANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDSISEVSMDYTIT 94
TTER L +Q ++ +L YD +LRP+ G P V + + + S IS + M+Y+I
Sbjct: 61 TTERPRGKLTRASQILNTILSNYDHKLRPSIGEKPTVVTVKVFVNSLGPISILDMEYSID 120
Query: 95 MYLNQYWKDDRLAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNG 154
+ Q W D+RL ++ E L L G+ ++W+PDTFF N K + +D+T N++ ++
Sbjct: 121 IIFYQTWYDERLRYNDTFETLILHGNVVSQLWIPDTFFRNSKRTQEYDITIPNQMALIHK 180
Query: 155 DGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMYWKETPVR--GVEE 212
DG + Y +R T C + + +P+D+ +C + S+ Y +++ W+ ++
Sbjct: 181 DGKVLYTVRMTIDARCSLHMLNFPMDSHSCPLSFSSFSYDEHEMIYKWENFKLKIDAKNT 240
Query: 213 AQLPQFTILGHETNDRKEKLAT--GTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV 270
+L +F G N++ E ++T G + ++ F + R G+ VFQ Y+PS + MLSWV
Sbjct: 241 WKLLEFDFTG--VNNKTEIISTPVGDFMVMTFFFNVSRRFGFIVFQNYIPSSVTTMLSWV 298
Query: 271 SFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMCFVFVFAALLE 330
SFWI EA +AR + R + PR+SY+ A+D Y+ +CFV F LLE
Sbjct: 299 SFWIKIEAAAARASVGVSSVLTMATLGTFSRKNFPRVSYLTALDFYIAICFVLCFCTLLE 358
Query: 331 YAAVNY 336
+ +N+
Sbjct: 359 FTVLNF 364
>FB|FBgn0037950 [details] [associations]
symbol:HisCl1 "Histamine-gated chloride channel subunit 1"
species:7227 "Drosophila melanogaster" [GO:0016933
"extracellular-glycine-gated ion channel activity" evidence=ISS]
[GO:0019182 "histamine-gated chloride channel activity"
evidence=NAS] [GO:0019183 "histamine-gated chloride channel
complex" evidence=NAS] [GO:0006811 "ion transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0043052 "thermotaxis"
evidence=IMP] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0043052 HSSP:P23415
InterPro:IPR015680 PANTHER:PTHR18945:SF26 FlyBase:FBgn0037950
EMBL:AF467953 ProteinModelPortal:Q8T9R9 SMR:Q8T9R9 STRING:Q8T9R9
PRIDE:Q8T9R9 InParanoid:Q8T9R9 OrthoDB:EOG41G1KM
ArrayExpress:Q8T9R9 Bgee:Q8T9R9 Uniprot:Q8T9R9
Length = 426
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 114/315 (36%), Positives = 170/315 (53%)
Query: 24 NSDSEKLRLCHKKSATTERLANVTQTISQLLHGYDIRLRPNFGGDPLYVGMDLTIASFDS 83
N++S +L + H +S+ + L ++ S+ YD P G P V + +T+ S DS
Sbjct: 40 NTESAEL-VSHYESSLS--LPDILPIPSKT---YDKNRAPKLLGQPTVVYLHVTVLSLDS 93
Query: 84 ISEVSMDYTITMYLNQYWKDDR--LAFSSEDEVLTLSGDFAEKIWVPDTFFANDKNSFLH 141
I+E SM Y ++L Q W+D R L + ++ L D+ IW D FF N K H
Sbjct: 94 INEESMTYVTDIFLAQSWRDPRPRLPENMSEQYRILDVDWLHSIWRADCFFKNAKKVTFH 153
Query: 142 DVTERNKLVRLNGDGSITYGMRFTTTLACMMDLHYYPLDNQNCTVEIESYGYTVLDVVMY 201
+++ N + + D ++ Y + T L C + YP D Q C++ IES +TV D+V
Sbjct: 154 EMSIPNHYIWVYHDKTLFYMSKLTLVLWCALKFESYPHDTQICSMMIESLSHTVEDLVFI 213
Query: 202 WKET-PVRGVEEAQLPQFTILGHETNDRKEKLATGTYQRLSLSFKLQRNIGYFVFQTYLP 260
W T P+ E +LPQ I + T D + +TG + L++ F L+R +GY +F TY+P
Sbjct: 214 WNMTDPLVVNTEIELPQLDISNNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIP 273
Query: 261 SILIVMLSWVSFWINHEATSARVAXXXXXXXXXXXXXXXXRSSLPRISYVKAIDIYLVMC 320
S LIV++SW+SFWI EA ARV + SLP +SYVKAIDI++ C
Sbjct: 274 SALIVVMSWISFWIKPEAIPARVTVGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSC 333
Query: 321 FVFVFAALLEYAAVN 335
VFVF +L+E+A VN
Sbjct: 334 SVFVFLSLMEFAVVN 348
WARNING: HSPs involving 362 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 365 339 0.00094 116 3 11 22 0.49 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 612
No. of states in DFA: 610 (65 KB)
Total size of DFA: 240 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.23u 0.08s 28.31t Elapsed: 00:00:34
Total cpu time: 28.30u 0.09s 28.39t Elapsed: 00:00:35
Start: Thu Aug 15 13:17:23 2013 End: Thu Aug 15 13:17:58 2013
WARNINGS ISSUED: 2