RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5813
(226 letters)
>d1wb0a2 d.26.3.1 (A:267-336) Chitotriosidase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 68
Score = 90.7 bits (225), Expect = 1e-24
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 125 YGRSYTLFNPESNQIGAPADGPGEQGDATREKGYLAYYEICSSLKSDDWSVEHPNPRAMG 184
YGRS+TL + ++GAPA G G G T+E G LAYYE+CS +
Sbjct: 1 YGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQ----RIQDQKV 56
Query: 185 PYAFKGNQWVGY 196
PY F+ NQWVG+
Sbjct: 57 PYIFRDNQWVGF 68
>d1vf8a2 d.26.3.1 (A:246-315) Chitinase-like lectin ym1 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 70
Score = 89.9 bits (223), Expect = 2e-24
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 125 YGRSYTLFNPESNQIGAPADGPGEQGDATREKGYLAYYEICSSLKSDDWSVEHPNPRAMG 184
YG ++ L +P IGAP G G T E G LAYYE+C+ L V +
Sbjct: 1 YGHTFILSDPSKTGIGAPTISTGPPGKYTDESGLLAYYEVCTFLNEGATEVW--DAPQEV 58
Query: 185 PYAFKGNQWVGY 196
PYA++GN+WVGY
Sbjct: 59 PYAYQGNEWVGY 70
>d2pi6a2 d.26.3.1 (A:240-307) Signal processing protein (SPC-40,
MGP-40) {Sheep (Ovis aries) [TaxId: 9940]}
Length = 68
Score = 89.1 bits (221), Expect = 4e-24
Identities = 35/72 (48%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 125 YGRSYTLFNPESNQIGAPADGPGEQGDATREKGYLAYYEICSSLKSDDWSVEHPNPRAMG 184
+GRS+TL + + +GAP GPG G T+EKG LAYYEIC L H
Sbjct: 1 FGRSFTLASSK-TDVGAPVSGPGIPGRFTKEKGILAYYEICDFLHGATT---HRFRDQQV 56
Query: 185 PYAFKGNQWVGY 196
PYA KGNQWV Y
Sbjct: 57 PYATKGNQWVAY 68
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus
(Coccidioides immitis) [TaxId: 5501]}
Length = 330
Score = 93.4 bits (231), Expect = 3e-23
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 26/138 (18%)
Query: 55 DIHRYLDFMNILSYDYHSAFEPAVNHHSPLFPLEEDGEYNFEAQLSIDHTIKHYLKSGAD 114
++ +YLDF N+++YD+ +++ H S +FP E S D +K Y+K+G
Sbjct: 191 EMDKYLDFWNLMAYDFSGSWDKVSGHMSNVFPSTTKPEST---PFSSDKAVKDYIKAGVP 247
Query: 115 PDKLVLGIPTYGRSYTL--------------FNPESNQ--------IGAPADGPGEQGDA 152
+K+VLG+P ES+ +G +G G G
Sbjct: 248 ANKIVLGMPLDTVKIAGKKAEYITKNGMGGGMWWESSSDKTGNESLVGTVVNGLGGTGKL 307
Query: 153 TREKGYLAYYE-ICSSLK 169
+ + L+Y E + +LK
Sbjct: 308 EQRENELSYPESVYDNLK 325
Score = 33.3 bits (75), Expect = 0.019
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 194 VGYDDQEIAKDKAKYVNDQKLGGIMFWSIDND 225
+ D +IA KA+Y+ +GG M+W +D
Sbjct: 255 MPLDTVKIAGKKAEYITKNGMGGGMWWESSSD 286
>d1goia2 c.1.8.5 (A:3-291,A:380-446) Chitinase B, catalytic domain
{Serratia marcescens [TaxId: 615]}
Length = 356
Score = 89.1 bits (220), Expect = 1e-21
Identities = 34/172 (19%), Positives = 53/172 (30%), Gaps = 51/172 (29%)
Query: 55 DIHRYLDFMNILSYDYHSAFEPAVNHHSPLFPLEEDGEYNFEAQLSIDHTIKHYLKSGAD 114
I LD++N+++YD +E NH + LF +
Sbjct: 199 QIVAPLDYINLMTYDLAGPWEKVTNHQAALFG-----------------------DAAGP 235
Query: 115 PDKLVLGIPTYGRSYTLFNPESNQIGAPADGPGEQGDATREKGYLAYYEICSSLKSDDWS 174
L G S+ + T + +
Sbjct: 236 TFYNALREANLGWSWEELTRAFPSPFSL----------TVDAAVQQHLM----------- 274
Query: 175 VEHPNPRAMGPYAFKGNQWVGYDDQEIAKDKAKYVNDQKLGGIMFWSIDNDD 226
G + K V +DD E K KAKY+ Q+LGG+MFW + D+
Sbjct: 275 -------MEGVPSAKIVMGVPFDDAESFKYKAKYIKQQQLGGVMFWHLGQDN 319
Score = 36.7 bits (84), Expect = 0.002
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 1 MKVKKKNTYLDFMNILSYDYHSAFEPAVNHHSPLFP 36
K+ + LD++N+++YD +E NH + LF
Sbjct: 195 SKLAQIVAPLDYINLMTYDLAGPWEKVTNHQAALFG 230
>d1jnda2 d.26.3.1 (A:279-370) Imaginal disc growth factor-2 {Fruit
fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 92
Score = 77.0 bits (189), Expect = 3e-19
Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 20/92 (21%)
Query: 125 YGRSYTLFNPESNQ---IGAPADGPGEQGDATREKGYLAYYEICSSLKSDDWSVE----- 176
YG ++ L + + GP +G +++ G L+Y EIC L +
Sbjct: 1 YGNAWKLTKDSGLEGVPVVPETSGPAPEGFQSQKPGLLSYAEICGKLSNPQNQFLKGNES 60
Query: 177 -----HPNPRAMGPYAFK-------GNQWVGY 196
+ G A++ WV Y
Sbjct: 61 PLRRVSDPTKRFGGIAYRPVDGQITEGIWVSY 92
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus
fumigatus [TaxId: 5085]}
Length = 333
Score = 73.7 bits (180), Expect = 4e-16
Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 25/131 (19%)
Query: 55 DIHRYLDFMNILSYDYHSAFEPAVNHHSPLFPLEEDGEYNFEAQLSIDHTIKHYLKSGAD 114
D+ + LDF N+++YDY +F H + ++ + + + Y G
Sbjct: 194 DMDQQLDFWNLMAYDYAGSFSSLSGHQANVYNDTSNP---LSTPFNTQTALDLYRAGGVP 250
Query: 115 PDKLVLGIPTYGRSYTLF----------------------NPESNQIGAPADGPGEQGDA 152
+K+VLG+P + I + G G
Sbjct: 251 ANKIVLGMPLDNPQVANLKSGYIKSLGLGGAMWWDSSSDKTGSDSLITTVVNALGGTGVF 310
Query: 153 TREKGYLAYYE 163
+ + L Y
Sbjct: 311 EQSQNELDYPV 321
Score = 39.0 bits (90), Expect = 2e-04
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 194 VGYDDQEIAKDKAKYVNDQKLGGIMFWSIDND 225
+ D+ ++A K+ Y+ LGG M+W +D
Sbjct: 258 MPLDNPQVANLKSGYIKSLGLGGAMWWDSSSD 289
>d1itxa2 d.26.3.1 (A:338-409) Chitinase A1 {Bacillus circulans
[TaxId: 1397]}
Length = 72
Score = 67.3 bits (164), Expect = 9e-16
Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Query: 125 YGRSYTLFNPESNQIGAPADGPGEQGDATREKGYLAYYEICSSLKSDDWSVEHPNPRAMG 184
YGR + N G G T E G +Y++ ++ + + + N A
Sbjct: 1 YGRGWDGCAQAGNGQYQTCTGGSSVG--TWEAGSFDFYDLEANYINKNGYTRYWNDTAKV 58
Query: 185 PYAFKGN--QWVGY 196
PY + + +++ Y
Sbjct: 59 PYLYNASNKRFISY 72
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain
{Serratia marcescens [TaxId: 615]}
Length = 358
Score = 69.4 bits (169), Expect = 1e-14
Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Query: 55 DIHRYLDFMNILSYDYHSAFEP-AVNHHSPLFPLEEDGEYNFEAQLSIDHTIKHYLKSGA 113
+D + ++SYD++ AF+ + H + L + + + + + L G
Sbjct: 245 VAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNA----PAWKPDTAYTTVNGVNALLAQGV 300
Query: 114 DPDKLVLGIPTYGRSYTL 131
P K+V+G RS
Sbjct: 301 KPGKIVVGTAMDARSVQA 318
Score = 40.5 bits (94), Expect = 9e-05
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 203 KDKAKYVNDQKLGGIMFWSIDNDD 226
+ K KYV D++LGG+ W ID D+
Sbjct: 317 QAKGKYVLDKQLGGLFSWEIDADN 340
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1,
saccharide binding domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 302
Score = 66.7 bits (162), Expect = 9e-14
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 57 HRYLDFMNILSYDYHSAFEPAVNHHSPLFPLEEDGEYNFEAQLSIDHTIKHYLKSGADPD 116
+ LD++ +++YD H + +SPL+ D + A L++D I ++ GA +
Sbjct: 180 SQSLDYIQVMTYDLHDPKDGYTGENSPLYKSPYDIGKS--ADLNVDSIISYWKDHGAASE 237
Query: 117 KLVLGIPTYG-RSYTLFN--PESNQIGAPADGPGEQGDATREKGYLAYYEICSSLKS 170
KL++G P RS+ L + N +G P + D + + ++ + S+LK
Sbjct: 238 KLIVGFPADNVRSFKLKAQWLKDNNLGGAVVWPLDMDDFSGSFCHQRHFPLTSTLKG 294
Score = 46.3 bits (109), Expect = 9e-07
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 189 KGNQWVGYDDQEIAKDKAKYVNDQKLGGIMFWSIDNDD 226
K D+ K KA+++ D LGG + W +D DD
Sbjct: 238 KLIVGFPADNVRSFKLKAQWLKDNNLGGAVVWPLDMDD 275
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 297
Score = 63.7 bits (154), Expect = 9e-13
Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 55 DIHRYLDFMNILSYDYHSAFEPAVNHHSPLFPLEEDGEYNFEAQLSIDHTIKHYLKSGAD 114
I + LDF+N+++YD+H ++E H+SPL+ +E+ A L++D ++ +L+ G
Sbjct: 178 KIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEE--SGAAASLNVDAAVQQWLQKGTP 235
Query: 115 PDKLVLGIPT 124
KL+LG+PT
Sbjct: 236 ASKLILGMPT 245
Score = 54.0 bits (129), Expect = 2e-09
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 187 AFKGNQWVGYDDQEIAKDKAKYVNDQKLGGIMFWSIDNDD 226
A K + DD E K K Y+ + LGG M W++D DD
Sbjct: 236 ASKLILGMPTDDVESFKTKVSYLKQKGLGGAMVWALDLDD 275
>d1itxa1 c.1.8.5 (A:33-337,A:410-451) Chitinase A1 {Bacillus
circulans [TaxId: 1397]}
Length = 347
Score = 62.2 bits (150), Expect = 4e-12
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 55 DIHRYLDFMNILSYDYHSAFEPAVNHHSPLF--PLEEDGEYNFEAQLSIDHTIKHYLKSG 112
I +D++NI++YD++ A++ H++PL P ++ + +L +G
Sbjct: 234 KIAAIVDWINIMTYDFNGAWQKISAHNAPLNYDPAASAAGVPDANTFNVAAGAQGHLDAG 293
Query: 113 ADPDKLVLGIP 123
KLVLG+P
Sbjct: 294 VPAAKLVLGVP 304
Score = 53.7 bits (128), Expect = 3e-09
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 189 KGNQWVGYDDQEIAKDKAKYVNDQKLGGIMFWSIDNDD 226
K V +DD E K Y+ + LGG MFW + D
Sbjct: 298 KLVLGVPFDDAESVGYKTAYIKSKGLGGAMFWELSGDR 335
>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B
{Arthrobacter sp., tad20 [TaxId: 1667]}
Length = 374
Score = 62.2 bits (150), Expect = 4e-12
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 56 IHRYLDFMNILSYDYHSAFEPAV-NHHSPLFPLEEDGEYNFEAQLSIDHTIKHYLKSGAD 114
+ LDF +I YD H A+ P + H + L+ D + + S D +K YL +G D
Sbjct: 250 NFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPADPRAPSK-KFSADKAVKKYLAAGID 308
Query: 115 PDKLVLGIPTYGRS 128
P +L LG+ +
Sbjct: 309 PKQLGLGLAADNIA 322
Score = 49.9 bits (118), Expect = 6e-08
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 189 KGNQWVGYDDQEIAKDKAKYVNDQKLGGIMFWSIDNDD 226
+ + D+ K K Y+ + LGG M+W + D
Sbjct: 311 QLGLGLAADNIATTKQKTDYIVSKGLGGGMWWELSGDR 348
>d2pi6a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein
(SPC-40, MGP-40) {Sheep (Ovis aries) [TaxId: 9940]}
Length = 292
Score = 61.4 bits (148), Expect = 7e-12
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 55 DIHRYLDFMNILSYDYHSAFEPAVNHHSPLFPLEEDGEYNFEAQLSIDHTIKHYLKSGAD 114
I R+LDF+++L+YD+H A+ V HHSPLF E + D+ + + L+ GA
Sbjct: 172 QISRHLDFISLLTYDFHGAWRQTVGHHSPLFR---GNEDASSRFSNADYAVSYMLRLGAP 228
Query: 115 PDKLVLGIPTY 125
+KLV+GIPT
Sbjct: 229 ANKLVMGIPTD 239
Score = 55.2 bits (132), Expect = 9e-10
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 187 AFKGNQWVGYDDQEIAKDKAKYVNDQKLGGIMFWSIDNDD 226
A K + DDQE K+KA+Y+ +++L G M W++D DD
Sbjct: 229 ANKLVMGIPTDDQESVKNKARYLKNRQLAGAMVWALDLDD 268
>d1kfwa2 d.26.3.1 (A:328-388) Psychrophilic chitinase B
{Arthrobacter sp., tad20 [TaxId: 1667]}
Length = 61
Score = 54.9 bits (132), Expect = 4e-11
Identities = 14/72 (19%), Positives = 24/72 (33%), Gaps = 11/72 (15%)
Query: 125 YGRSYTLFNPESNQIGAPADGPGEQGDATREKGYLAYYEICSSLKSDDWSVEHPNPRAMG 184
YGR +T ++ PA T E Y ++ + +H +
Sbjct: 1 YGRGWT--GAKNVSPWGPATDGAPG---TYETANEDYDKLKT------LGTDHYDAATGS 49
Query: 185 PYAFKGNQWVGY 196
+ + G QW Y
Sbjct: 50 AWRYDGTQWWSY 61
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 327
Score = 58.6 bits (141), Expect = 7e-11
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 189 KGNQWVGYDDQEIAKDKAKYVNDQKLGGIMFWSIDNDD 226
K N V DD + A +KA Y + LGG+ + + DD
Sbjct: 270 KINLGVATDDPDSASNKAAYARVKNLGGVALFDLSYDD 307
Score = 56.7 bits (136), Expect = 3e-10
Identities = 16/71 (22%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 56 IHRYLDFMNILSYDYHSAFE--PAVNHHSPLFPLEEDGEYNFEAQLSIDHTIKHYLKSGA 113
++ +DF+N+ ++D+ + ++ +P++ DG + A L+ D ++++L G
Sbjct: 209 LNGLVDFVNLATFDFLTPARNPEEADYSAPIYHP--DGSKDRLAHLNADFQVEYWLSQGF 266
Query: 114 DPDKLVLGIPT 124
+K+ LG+ T
Sbjct: 267 PSNKINLGVAT 277
>d1edqa3 d.26.3.1 (A:444-516) Chitinase A {Serratia marcescens
[TaxId: 615]}
Length = 73
Score = 51.9 bits (124), Expect = 6e-10
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 125 YGRSYTLFNPESNQIGAPADGPGEQGDATREKGYLAYYEICSSLKSDDWSVEHPNPRAMG 184
YGR +T N N I G T E G + Y +I S +W + + A
Sbjct: 1 YGRGWTGVNGYQNNIPFTGTATG-PVKGTWENGIVDYRQIAGQFMSGEWQYTY-DATAEA 58
Query: 185 PYAFKGN--QWVGYD 197
PY FK + + +D
Sbjct: 59 PYVFKPSTGDLITFD 73
>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase
{Flavobacterium meningosepticum, endoglycosidase F1
[TaxId: 238]}
Length = 285
Score = 47.1 bits (111), Expect = 5e-07
Identities = 13/141 (9%), Positives = 34/141 (24%), Gaps = 33/141 (23%)
Query: 53 SYDIHRYLDFMNILSYDYHSAFEPAVNHHSPLFPLEEDGEYNFEAQLSIDHTIKHYLKSG 112
+ D +++ +DY +++ A N+ + S + Y +
Sbjct: 178 AVDGVNAGSYVDYAIHDYGGSYDLATNYPGLA--------KSGMVMSSQEFNQGRYATAQ 229
Query: 113 ADPDKLVLGIPTYGRSYTLFNPESNQIGAPADGPGEQGDATREKGYLAYYEICSSLKSDD 172
A + + G + + + G L ++ + D
Sbjct: 230 ALRNIVTKGYGGHMI-----------------FAMDPNRSNFTSGQLPALKLIAKELYGD 272
Query: 173 WSVEHPNPRAMGPYAFKGNQW 193
+ W
Sbjct: 273 --------ELVYSNTPYSKDW 285
Score = 28.2 bits (62), Expect = 0.87
Identities = 4/25 (16%), Positives = 12/25 (48%)
Query: 9 YLDFMNILSYDYHSAFEPAVNHHSP 33
+++ +DY +++ A N+
Sbjct: 184 AGSYVDYAIHDYGGSYDLATNYPGL 208
>d1nara_ c.1.8.5 (A:) Seed storage protein {Vicia narbonensis,
Narbonin [TaxId: 3912]}
Length = 289
Score = 38.6 bits (89), Expect = 3e-04
Identities = 8/79 (10%), Positives = 26/79 (32%), Gaps = 4/79 (5%)
Query: 56 IHRYLDFMNILSYDYHSAFEPAVNHHSPLFPLEEDGEYNFEAQ---LSIDHTIKHYLKSG 112
+ D++N + Y + + +P + + + E ++ +
Sbjct: 178 YNAKKDYINWVDYQFSNQQKPVSTDDAFVEIFKSL-EKDYHPHKVLPGFSTDPLDTKHNK 236
Query: 113 ADPDKLVLGIPTYGRSYTL 131
D + G ++++L
Sbjct: 237 ITRDIFIGGCTRLVQTFSL 255
Score = 28.6 bits (63), Expect = 0.63
Identities = 6/34 (17%), Positives = 14/34 (41%)
Query: 1 MKVKKKNTYLDFMNILSYDYHSAFEPAVNHHSPL 34
K N D++N + Y + + +P + +
Sbjct: 173 HYQKLYNAKKDYINWVDYQFSNQQKPVSTDDAFV 206
Score = 27.8 bits (61), Expect = 0.91
Identities = 7/57 (12%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Query: 171 DDWSVEHPNPRA-MGPYAFKGNQWVGYDDQEIAKDK-AKYVNDQKLGGIMFWSIDND 225
++ + G + ++I + V L G+ FW+ ++
Sbjct: 210 KSLEKDYHPHKVLPGFSTDPLDTKHNKITRDIFIGGCTRLVQTFSLPGVFFWNANDS 266
>d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase
{Streptomyces plicatus, endoglycosidase H [TaxId: 1922]}
Length = 265
Score = 35.8 bits (82), Expect = 0.003
Identities = 7/63 (11%), Positives = 18/63 (28%)
Query: 50 SIVSYDIHRYLDFMNILSYDYHSAFEPAVNHHSPLFPLEEDGEYNFEAQLSIDHTIKHYL 109
S +SY D + Y+ ++ E ++ ++ + +
Sbjct: 170 SRLSYGGVDVSDKFDYAWNPYYGTWQVPGIALPKAQLSPAAVEIGRTSRSTVADLARRTV 229
Query: 110 KSG 112
G
Sbjct: 230 DEG 232
Score = 30.0 bits (67), Expect = 0.18
Identities = 3/46 (6%), Positives = 11/46 (23%)
Query: 9 YLDFMNILSYDYHSAFEPAVNHHSPLFPLEEDGEYNFEAQLSIVSY 54
D + Y+ ++ E ++ ++
Sbjct: 179 VSDKFDYAWNPYYGTWQVPGIALPKAQLSPAAVEIGRTSRSTVADL 224
Score = 29.3 bits (65), Expect = 0.34
Identities = 8/49 (16%), Positives = 16/49 (32%)
Query: 178 PNPRAMGPYAFKGNQWVGYDDQEIAKDKAKYVNDQKLGGIMFWSIDNDD 226
P +G + D A+ D+ G + +++D D
Sbjct: 197 PGIALPKAQLSPAAVEIGRTSRSTVADLARRTVDEGYGVYLTYNLDGGD 245
>d1cnva_ c.1.8.5 (A:) Seed storage protein {Jack bean (Canavalia
ensiformis), Concanavalin B [TaxId: 3823]}
Length = 283
Score = 34.8 bits (79), Expect = 0.005
Identities = 5/43 (11%), Positives = 9/43 (20%)
Query: 184 GPYAFKGNQWVGYDDQEIAKDKAKYVNDQKLGGIMFWSIDNDD 226
G ++ + GI W+ D
Sbjct: 229 SQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADK 271
>d2hvma_ c.1.8.5 (A:) Hevamine A (chitinase/lysozyme) {Para rubber
tree (Hevea brasiliensis) [TaxId: 3981]}
Length = 273
Score = 32.4 bits (73), Expect = 0.030
Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 3/59 (5%)
Query: 171 DDWSVEHPNPR-AMGPYAFKGNQWVGYDDQEIAKDKAKYV--NDQKLGGIMFWSIDNDD 226
+ W+ + +G A GY ++ + K GG+M WS DD
Sbjct: 203 NRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDD 261
>d1ta3a_ c.1.8.5 (A:) Xylanase inhibitor protein I, XIP-I {Wheat
(Triticum aestivum) [TaxId: 4565]}
Length = 274
Score = 28.6 bits (63), Expect = 0.57
Identities = 17/60 (28%), Positives = 22/60 (36%), Gaps = 7/60 (11%)
Query: 171 DDWSVEHPNPRAMG--PYAFKGNQWVGYDD--QEIAKDKAKYVNDQKLGGIMFWSIDNDD 226
D W+ +P R K +QWV + +A K N GGIM W D
Sbjct: 206 DKWTAAYPATRFYVGLTADDKSHQWVHPKNVYYGVAPVAQKKDN---YGGIMLWDRYFDK 262
>d1eoka_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase
{Flavobacterium meningosepticum, endoglycosidase F3
[TaxId: 238]}
Length = 282
Score = 25.2 bits (54), Expect = 7.6
Identities = 5/77 (6%), Positives = 22/77 (28%), Gaps = 2/77 (2%)
Query: 55 DIHRYLDFMNILSYDYHSAFEPAVNHHSPLFPLE--EDGEYNFEAQLSIDHTIKHYLKSG 112
+ +++ + SY + + + +++ + A+ + +
Sbjct: 193 NFRNNFNYIQLQSYGANVSRTQLMMNYATGTNKIPASKMVFGAYAEGGTNQANDVEVAKW 252
Query: 113 ADPDKLVLGIPTYGRSY 129
G+ Y +
Sbjct: 253 TPTQGAKGGMMIYTYNS 269
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.136 0.421
Gapped
Lambda K H
0.267 0.0429 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 916,287
Number of extensions: 43758
Number of successful extensions: 195
Number of sequences better than 10.0: 1
Number of HSP's gapped: 168
Number of HSP's successfully gapped: 58
Length of query: 226
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 144
Effective length of database: 1,281,736
Effective search space: 184569984
Effective search space used: 184569984
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 51 (24.2 bits)