Query psy5819
Match_columns 296
No_of_seqs 394 out of 1839
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 18:45:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5819.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5819hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2o30_A Nuclear movement protei 99.9 4.2E-23 1.5E-27 169.0 10.8 114 1-115 1-124 (131)
2 1wfi_A Nuclear distribution ge 99.8 6.3E-22 2.1E-26 162.0 6.6 109 5-113 7-129 (131)
3 2xcm_C SGT1-like protein, cyto 99.8 2.6E-19 8.7E-24 137.0 9.7 81 6-86 3-88 (92)
4 3qor_A Nuclear migration prote 99.8 8.3E-19 2.8E-23 141.5 10.7 82 5-86 16-104 (121)
5 1wgv_A KIAA1068 protein; CS do 99.8 2E-18 6.8E-23 139.8 10.7 82 5-86 19-108 (124)
6 1rl1_A Suppressor of G2 allele 99.8 1.2E-18 4.3E-23 138.7 9.1 86 1-86 4-95 (114)
7 1x5m_A Calcyclin-binding prote 99.8 5.7E-18 1.9E-22 137.7 12.3 84 4-87 19-112 (127)
8 2rh0_A NUDC domain-containing 99.7 7.4E-18 2.5E-22 141.9 11.3 86 1-86 9-100 (157)
9 1wh0_A Ubiquitin carboxyl-term 99.7 1.1E-17 3.8E-22 137.1 10.5 82 5-86 19-118 (134)
10 1ejf_A Progesterone receptor P 99.7 2.2E-17 7.7E-22 133.8 8.5 80 5-86 2-89 (125)
11 2kmw_A Uncharacterized protein 99.7 3.4E-17 1.2E-21 136.7 7.6 82 1-86 1-88 (150)
12 2cg9_X CO-chaperone protein SB 99.6 1.1E-16 3.7E-21 131.3 4.4 81 4-86 5-106 (134)
13 4gcn_A Protein STI-1; structur 99.2 2.9E-11 9.8E-16 96.2 9.2 61 235-295 8-68 (127)
14 4gco_A Protein STI-1; structur 99.2 6.6E-11 2.3E-15 94.2 9.2 63 233-295 11-73 (126)
15 2hr2_A Hypothetical protein; a 99.0 6.1E-10 2.1E-14 93.6 8.2 62 235-296 11-84 (159)
16 3rkv_A Putative peptidylprolyl 99.0 9.8E-10 3.3E-14 89.7 7.0 63 233-295 9-89 (162)
17 3upv_A Heat shock protein STI1 98.9 5.9E-09 2E-13 81.1 9.2 61 234-294 37-97 (126)
18 2l6j_A TPR repeat-containing p 98.8 1.4E-08 4.7E-13 76.2 8.9 62 234-295 3-64 (111)
19 2k8q_A Protein SHQ1; beta-sand 98.8 1.5E-08 5.2E-13 82.1 9.5 83 4-86 2-90 (134)
20 3gyz_A Chaperone protein IPGC; 98.8 3.9E-08 1.3E-12 81.1 10.3 64 232-295 67-130 (151)
21 4gco_A Protein STI-1; structur 98.7 5E-08 1.7E-12 77.3 9.7 65 231-295 43-107 (126)
22 3gyz_A Chaperone protein IPGC; 98.7 3.7E-08 1.3E-12 81.2 9.3 83 213-295 14-96 (151)
23 3eud_A Protein SHQ1; CS domain 98.7 1.4E-07 4.7E-12 74.1 11.2 84 3-86 15-104 (115)
24 3sz7_A HSC70 cochaperone (SGT) 98.7 4.8E-08 1.6E-12 79.6 9.0 63 233-295 43-105 (164)
25 3ma5_A Tetratricopeptide repea 98.7 6.8E-08 2.3E-12 73.0 9.3 64 232-295 4-67 (100)
26 2hr2_A Hypothetical protein; a 98.7 7.4E-08 2.5E-12 80.8 9.0 60 236-295 58-128 (159)
27 3q49_B STIP1 homology and U bo 98.6 1.5E-07 5.2E-12 73.3 9.6 62 234-295 42-103 (137)
28 3upv_A Heat shock protein STI1 98.6 2.4E-07 8.1E-12 71.8 9.7 61 235-295 4-64 (126)
29 3rkv_A Putative peptidylprolyl 98.6 2.2E-07 7.6E-12 75.4 8.9 62 234-295 62-123 (162)
30 3vtx_A MAMA; tetratricopeptide 98.5 2.6E-07 9E-12 75.9 9.1 62 234-295 4-65 (184)
31 2c2l_A CHIP, carboxy terminus 98.5 2.6E-07 9E-12 82.8 9.7 62 234-295 3-64 (281)
32 2vgx_A Chaperone SYCD; alterna 98.5 3.6E-07 1.2E-11 74.1 9.5 64 232-295 52-115 (148)
33 3vtx_A MAMA; tetratricopeptide 98.5 4E-07 1.4E-11 74.8 9.7 63 233-295 105-167 (184)
34 2xcb_A PCRH, regulatory protei 98.5 4.5E-07 1.5E-11 72.3 9.6 64 232-295 49-112 (142)
35 2vgx_A Chaperone SYCD; alterna 98.5 3.1E-07 1.1E-11 74.5 8.3 63 233-295 19-81 (148)
36 4ga2_A E3 SUMO-protein ligase 98.5 3.2E-07 1.1E-11 74.4 8.4 62 234-295 30-91 (150)
37 3k9i_A BH0479 protein; putativ 98.5 5.1E-07 1.7E-11 69.5 9.0 62 234-295 26-87 (117)
38 2kc7_A BFR218_protein; tetratr 98.5 4.1E-07 1.4E-11 67.3 8.1 57 239-295 4-61 (99)
39 1kt0_A FKBP51, 51 kDa FK506-bi 98.5 2.4E-07 8.1E-12 89.2 8.5 62 234-295 267-343 (457)
40 4fei_A Heat shock protein-rela 98.5 1.4E-06 5E-11 67.3 11.2 77 5-81 6-97 (102)
41 2xcb_A PCRH, regulatory protei 98.5 4.2E-07 1.4E-11 72.5 8.3 64 232-295 15-78 (142)
42 3sz7_A HSC70 cochaperone (SGT) 98.5 7.9E-07 2.7E-11 72.2 9.7 64 232-295 8-71 (164)
43 1na3_A Designed protein CTPR2; 98.4 1.1E-06 3.9E-11 63.2 9.2 61 235-295 9-69 (91)
44 2fbn_A 70 kDa peptidylprolyl i 98.4 6.7E-07 2.3E-11 75.0 9.0 61 235-295 38-114 (198)
45 2kat_A Uncharacterized protein 98.4 1.1E-06 3.9E-11 67.0 9.2 63 233-295 17-79 (115)
46 3gla_A Low molecular weight he 98.4 2.1E-06 7E-11 66.0 10.6 77 4-80 3-99 (100)
47 1elw_A TPR1-domain of HOP; HOP 98.4 1.2E-06 4.1E-11 65.2 8.7 64 232-295 35-98 (118)
48 2dba_A Smooth muscle cell asso 98.4 1.4E-06 4.7E-11 68.0 9.4 61 235-295 65-125 (148)
49 1p5q_A FKBP52, FK506-binding p 98.4 8.5E-07 2.9E-11 81.7 8.9 61 235-295 147-222 (336)
50 1hxi_A PEX5, peroxisome target 98.4 1.1E-06 3.9E-11 68.7 8.3 65 231-295 47-111 (121)
51 4i17_A Hypothetical protein; T 98.4 1.3E-06 4.6E-11 74.2 9.3 61 235-295 42-102 (228)
52 3q49_B STIP1 homology and U bo 98.4 2.1E-06 7.2E-11 66.6 9.7 64 232-295 6-69 (137)
53 2kck_A TPR repeat; tetratricop 98.4 1.1E-06 3.6E-11 65.1 7.3 64 232-295 37-103 (112)
54 2lni_A Stress-induced-phosphop 98.4 1.3E-06 4.4E-11 66.8 8.0 65 231-295 46-110 (133)
55 1hxi_A PEX5, peroxisome target 98.3 1.7E-06 5.9E-11 67.6 8.7 59 237-295 19-77 (121)
56 1elr_A TPR2A-domain of HOP; HO 98.3 2.4E-06 8.1E-11 64.8 9.0 61 235-295 4-64 (131)
57 4gcn_A Protein STI-1; structur 98.3 1.5E-06 5.1E-11 68.5 7.6 64 232-295 39-109 (127)
58 1a17_A Serine/threonine protei 98.3 3.4E-06 1.1E-10 67.1 9.2 64 232-295 44-107 (166)
59 3aab_A Putative uncharacterize 98.3 5.2E-06 1.8E-10 66.2 10.0 77 5-81 24-118 (123)
60 1ihg_A Cyclophilin 40; ppiase 98.3 1E-06 3.5E-11 82.7 6.6 62 234-295 222-299 (370)
61 1hh8_A P67PHOX, NCF-2, neutrop 98.2 3.9E-06 1.3E-10 70.2 9.3 62 234-295 36-97 (213)
62 2xev_A YBGF; tetratricopeptide 98.2 6E-06 2.1E-10 63.3 9.2 61 235-295 39-102 (129)
63 1elw_A TPR1-domain of HOP; HOP 98.2 7.4E-06 2.5E-10 60.8 9.4 62 234-295 3-64 (118)
64 3urz_A Uncharacterized protein 98.2 4.2E-06 1.4E-10 71.2 9.0 56 240-295 59-114 (208)
65 2lni_A Stress-induced-phosphop 98.2 1.3E-05 4.3E-10 61.1 10.9 65 231-295 12-76 (133)
66 2vyi_A SGTA protein; chaperone 98.2 6.7E-06 2.3E-10 62.1 9.2 64 232-295 43-106 (131)
67 3urz_A Uncharacterized protein 98.2 2.5E-06 8.6E-11 72.5 7.3 62 234-295 3-80 (208)
68 2pl2_A Hypothetical conserved 98.2 4.5E-06 1.5E-10 71.4 8.9 62 234-295 4-65 (217)
69 2if4_A ATFKBP42; FKBP-like, al 98.2 7.1E-07 2.4E-11 82.4 4.1 61 235-295 179-256 (338)
70 1kt0_A FKBP51, 51 kDa FK506-bi 98.2 3.8E-06 1.3E-10 80.7 9.2 61 235-295 317-377 (457)
71 2kck_A TPR repeat; tetratricop 98.2 5.4E-06 1.8E-10 61.1 8.0 61 235-295 6-66 (112)
72 2xev_A YBGF; tetratricopeptide 98.2 4.2E-06 1.4E-10 64.2 7.6 59 237-295 4-65 (129)
73 4ga2_A E3 SUMO-protein ligase 98.2 3.5E-06 1.2E-10 68.2 7.4 65 231-295 61-126 (150)
74 1p5q_A FKBP52, FK506-binding p 98.2 4.9E-06 1.7E-10 76.5 9.2 61 235-295 196-256 (336)
75 1zu2_A Mitochondrial import re 98.2 2.1E-06 7.3E-11 71.8 5.9 65 231-295 32-117 (158)
76 1a17_A Serine/threonine protei 98.1 1.3E-05 4.3E-10 63.7 9.7 61 235-295 13-73 (166)
77 2fbn_A 70 kDa peptidylprolyl i 98.1 8.8E-06 3E-10 68.0 9.0 60 236-295 89-148 (198)
78 3qky_A Outer membrane assembly 98.1 9.5E-06 3.3E-10 70.6 9.4 65 231-295 11-78 (261)
79 2vyi_A SGTA protein; chaperone 98.1 1.8E-05 6E-10 59.7 9.7 62 234-295 11-72 (131)
80 2dba_A Smooth muscle cell asso 98.1 1.4E-05 4.7E-10 62.2 9.0 64 232-295 25-91 (148)
81 1ihg_A Cyclophilin 40; ppiase 98.1 9.5E-06 3.2E-10 76.0 9.1 62 234-295 272-333 (370)
82 2if4_A ATFKBP42; FKBP-like, al 98.1 6E-06 2E-10 76.1 7.5 60 237-296 232-291 (338)
83 4gyw_A UDP-N-acetylglucosamine 98.1 9.5E-06 3.3E-10 82.9 9.2 66 230-295 38-103 (723)
84 2h6f_A Protein farnesyltransfe 98.0 8.3E-06 2.8E-10 77.0 7.7 65 231-295 127-192 (382)
85 3fp2_A TPR repeat-containing p 98.0 5.6E-06 1.9E-10 78.6 6.5 61 235-295 25-85 (537)
86 2c2l_A CHIP, carboxy terminus 98.0 1.5E-05 5.2E-10 71.2 9.0 64 232-295 35-98 (281)
87 2pl2_A Hypothetical conserved 98.0 1.1E-05 3.9E-10 68.9 7.9 65 231-295 35-110 (217)
88 2gw1_A Mitochondrial precursor 98.0 1.3E-05 4.5E-10 75.2 8.9 61 235-295 39-99 (514)
89 4i17_A Hypothetical protein; T 98.0 1.8E-05 6E-10 67.2 8.9 63 233-295 5-68 (228)
90 2h6f_A Protein farnesyltransfe 98.0 4.9E-06 1.7E-10 78.6 5.6 65 231-295 162-226 (382)
91 1elr_A TPR2A-domain of HOP; HO 98.0 1.5E-05 5E-10 60.3 7.3 62 234-295 37-105 (131)
92 4eld_A MJ16.5-P1, small heat s 98.0 2.9E-05 9.9E-10 64.8 9.7 74 8-81 59-153 (161)
93 1na0_A Designed protein CTPR3; 98.0 3.5E-05 1.2E-09 57.4 9.2 63 233-295 41-103 (125)
94 3ieg_A DNAJ homolog subfamily 98.0 1.8E-05 6.1E-10 70.2 8.7 62 234-295 36-97 (359)
95 1hh8_A P67PHOX, NCF-2, neutrop 98.0 2.7E-05 9.4E-10 64.9 9.4 63 233-295 69-147 (213)
96 4gyw_A UDP-N-acetylglucosamine 98.0 1.8E-05 6.1E-10 80.9 9.8 66 230-295 72-137 (723)
97 1gme_A Heat shock protein 16.9 98.0 3.8E-05 1.3E-09 63.6 10.0 76 5-80 43-139 (151)
98 3u4t_A TPR repeat-containing p 98.0 1E-05 3.5E-10 69.8 6.6 56 238-293 6-61 (272)
99 2yhc_A BAMD, UPF0169 lipoprote 98.0 2.7E-05 9.4E-10 66.6 8.9 62 234-295 3-67 (225)
100 1na0_A Designed protein CTPR3; 97.9 6E-05 2E-09 56.2 9.7 61 235-295 9-69 (125)
101 3uq3_A Heat shock protein STI1 97.9 3.1E-05 1E-09 65.6 8.9 60 235-295 5-64 (258)
102 3uq3_A Heat shock protein STI1 97.9 4.1E-05 1.4E-09 64.8 9.2 59 236-294 140-198 (258)
103 3l1e_A Alpha-crystallin A chai 97.9 9.2E-05 3.1E-09 57.5 10.2 72 9-80 6-91 (106)
104 2wj5_A Heat shock protein beta 97.9 5E-05 1.7E-09 58.5 8.3 74 8-81 4-91 (101)
105 3u4t_A TPR repeat-containing p 97.9 5.5E-05 1.9E-09 65.1 9.3 63 234-296 73-135 (272)
106 1wao_1 Serine/threonine protei 97.9 4.2E-05 1.5E-09 73.9 9.4 63 233-295 38-100 (477)
107 1xnf_A Lipoprotein NLPI; TPR, 97.9 6.3E-05 2.2E-09 64.5 9.6 62 234-295 76-137 (275)
108 2e2e_A Formate-dependent nitri 97.9 4.4E-05 1.5E-09 62.2 8.2 62 234-295 77-141 (177)
109 2l6j_A TPR repeat-containing p 97.9 5.5E-06 1.9E-10 61.7 2.4 61 233-293 36-102 (111)
110 2r5s_A Uncharacterized protein 97.9 1.2E-05 4.1E-10 66.1 4.7 60 236-295 7-66 (176)
111 1xnf_A Lipoprotein NLPI; TPR, 97.8 6.2E-05 2.1E-09 64.6 9.3 63 233-295 41-103 (275)
112 2y4t_A DNAJ homolog subfamily 97.8 4.3E-05 1.5E-09 70.8 8.3 63 233-295 58-120 (450)
113 1wao_1 Serine/threonine protei 97.8 5.7E-06 2E-10 80.1 2.1 61 235-295 6-66 (477)
114 2e2e_A Formate-dependent nitri 97.8 8.2E-05 2.8E-09 60.5 8.7 63 233-295 42-107 (177)
115 2pzi_A Probable serine/threoni 97.8 4.7E-05 1.6E-09 76.7 8.5 65 231-295 429-493 (681)
116 2v5f_A Prolyl 4-hydroxylase su 97.8 0.00011 3.8E-09 55.9 8.7 62 234-295 4-72 (104)
117 2y1y_A Alpha-crystallin B chai 97.8 8.7E-05 3E-09 55.8 7.9 69 12-80 3-85 (90)
118 3q9p_A Heat shock protein beta 97.8 0.00015 5.3E-09 53.9 9.1 68 11-78 3-84 (85)
119 4eqf_A PEX5-related protein; a 97.8 0.0001 3.6E-09 66.5 9.7 64 232-295 96-159 (365)
120 4eqf_A PEX5-related protein; a 97.7 6.3E-05 2.1E-09 68.0 8.0 61 235-295 65-125 (365)
121 3as5_A MAMA; tetratricopeptide 97.7 0.00017 5.9E-09 57.4 9.7 62 234-295 109-170 (186)
122 3as5_A MAMA; tetratricopeptide 97.7 0.00021 7.1E-09 56.9 9.9 60 235-294 76-135 (186)
123 2vq2_A PILW, putative fimbrial 97.7 0.00014 4.9E-09 60.0 9.2 63 233-295 40-103 (225)
124 4g1t_A Interferon-induced prot 97.7 0.00011 3.9E-09 68.6 9.5 62 234-295 50-120 (472)
125 3qou_A Protein YBBN; thioredox 97.7 0.00012 3.9E-09 65.5 8.9 62 234-295 116-177 (287)
126 3hym_B Cell division cycle pro 97.7 0.00017 5.9E-09 63.2 9.7 65 232-296 233-297 (330)
127 1qqe_A Vesicular transport pro 97.7 0.00011 3.8E-09 65.5 8.5 61 235-295 158-225 (292)
128 1fch_A Peroxisomal targeting s 97.7 0.00016 5.4E-09 64.9 9.5 61 235-295 217-277 (368)
129 2fo7_A Synthetic consensus TPR 97.7 0.00019 6.3E-09 53.8 8.5 63 233-295 33-95 (136)
130 4abn_A Tetratricopeptide repea 97.7 8.2E-05 2.8E-09 71.5 7.9 64 232-295 99-163 (474)
131 2fo7_A Synthetic consensus TPR 97.7 0.00024 8.1E-09 53.2 8.9 64 232-295 66-129 (136)
132 1fch_A Peroxisomal targeting s 97.7 0.00016 5.6E-09 64.8 9.3 65 231-295 247-311 (368)
133 2vsy_A XCC0866; transferase, g 97.6 0.00013 4.4E-09 71.1 9.0 65 231-295 53-117 (568)
134 3bee_A Putative YFRE protein; 97.6 0.00031 1.1E-08 52.9 9.0 64 232-295 3-69 (93)
135 2ho1_A Type 4 fimbrial biogene 97.6 0.00029 1E-08 59.8 9.8 63 233-295 69-131 (252)
136 2gw1_A Mitochondrial precursor 97.6 0.00017 5.8E-09 67.6 9.1 61 234-295 5-65 (514)
137 2q7f_A YRRB protein; TPR, prot 97.6 0.0003 1E-08 59.0 9.7 60 235-294 57-116 (243)
138 1w3b_A UDP-N-acetylglucosamine 97.6 0.00013 4.3E-09 66.7 7.9 62 234-295 66-127 (388)
139 3ieg_A DNAJ homolog subfamily 97.6 0.00025 8.4E-09 62.7 9.2 62 234-295 2-63 (359)
140 2vq2_A PILW, putative fimbrial 97.6 0.00031 1E-08 58.0 9.2 64 232-295 73-139 (225)
141 2q7f_A YRRB protein; TPR, prot 97.6 0.00036 1.2E-08 58.5 9.8 61 235-295 91-151 (243)
142 3cv0_A Peroxisome targeting si 97.6 0.00033 1.1E-08 61.3 9.7 60 235-294 206-265 (327)
143 4abn_A Tetratricopeptide repea 97.6 0.00012 4.2E-09 70.3 7.4 64 232-295 210-284 (474)
144 2vsy_A XCC0866; transferase, g 97.5 0.00022 7.7E-09 69.4 9.3 63 233-295 89-154 (568)
145 2pzi_A Probable serine/threoni 97.5 7.7E-05 2.6E-09 75.2 5.9 61 232-293 464-524 (681)
146 3k9i_A BH0479 protein; putativ 97.5 2.3E-05 7.8E-10 60.1 1.2 49 247-295 2-53 (117)
147 2ho1_A Type 4 fimbrial biogene 97.5 0.00021 7.3E-09 60.7 7.4 61 235-295 37-97 (252)
148 1na3_A Designed protein CTPR2; 97.5 0.00042 1.4E-08 49.3 7.9 51 233-283 41-91 (91)
149 2y4t_A DNAJ homolog subfamily 97.5 0.00039 1.3E-08 64.2 9.7 65 231-295 22-86 (450)
150 3qky_A Outer membrane assembly 97.5 0.00024 8.2E-09 61.6 7.7 61 235-295 52-123 (261)
151 3hym_B Cell division cycle pro 97.5 0.00041 1.4E-08 60.7 9.2 61 234-294 124-184 (330)
152 3u3w_A Transcriptional activat 97.5 0.0002 6.8E-09 63.6 7.1 62 234-295 195-263 (293)
153 2yhc_A BAMD, UPF0169 lipoprote 97.5 0.00043 1.5E-08 59.0 8.9 57 239-295 151-210 (225)
154 2r5s_A Uncharacterized protein 97.5 0.00031 1E-08 57.5 7.7 64 232-295 105-170 (176)
155 1qqe_A Vesicular transport pro 97.5 0.00021 7.2E-09 63.7 7.1 61 235-295 117-184 (292)
156 3ro2_A PINS homolog, G-protein 97.5 0.00047 1.6E-08 59.9 9.2 61 235-295 5-69 (338)
157 3fp2_A TPR repeat-containing p 97.5 0.0004 1.4E-08 65.6 9.4 62 232-293 56-117 (537)
158 1w3b_A UDP-N-acetylglucosamine 97.4 0.00047 1.6E-08 62.8 9.5 61 235-295 237-297 (388)
159 3sf4_A G-protein-signaling mod 97.4 0.0005 1.7E-08 62.1 9.6 63 233-295 7-73 (406)
160 3cv0_A Peroxisome targeting si 97.4 0.00058 2E-08 59.7 9.7 63 233-295 53-115 (327)
161 2qfc_A PLCR protein; TPR, HTH, 97.4 0.00055 1.9E-08 60.7 9.2 61 235-295 155-222 (293)
162 4a1s_A PINS, partner of inscut 97.4 0.00048 1.6E-08 62.9 9.0 63 233-295 46-112 (411)
163 3ro3_A PINS homolog, G-protein 97.4 0.00045 1.5E-08 53.4 7.1 61 235-295 49-115 (164)
164 3mkr_A Coatomer subunit epsilo 97.3 0.00061 2.1E-08 61.1 8.8 62 233-294 198-260 (291)
165 3u3w_A Transcriptional activat 97.3 0.00026 9E-09 62.8 6.1 61 235-295 155-222 (293)
166 2klr_A Alpha-crystallin B chai 97.3 0.00067 2.3E-08 57.4 8.1 73 8-80 66-152 (175)
167 3ro3_A PINS homolog, G-protein 97.3 0.00045 1.5E-08 53.4 6.3 61 235-295 9-75 (164)
168 3edt_B KLC 2, kinesin light ch 97.3 0.00041 1.4E-08 59.1 6.4 62 234-295 84-153 (283)
169 3edt_B KLC 2, kinesin light ch 97.3 0.00048 1.7E-08 58.6 6.7 62 234-295 126-195 (283)
170 2ifu_A Gamma-SNAP; membrane fu 97.2 0.00041 1.4E-08 62.2 6.2 59 236-295 117-181 (307)
171 2qfc_A PLCR protein; TPR, HTH, 97.2 0.00045 1.5E-08 61.2 5.7 60 236-295 197-263 (293)
172 3ulq_A Response regulator aspa 97.2 0.00093 3.2E-08 61.1 8.0 61 235-295 224-290 (383)
173 3mkr_A Coatomer subunit epsilo 97.1 0.00068 2.3E-08 60.8 6.9 51 245-295 176-226 (291)
174 3gw4_A Uncharacterized protein 97.1 0.0007 2.4E-08 55.3 6.4 62 234-295 25-92 (203)
175 2ifu_A Gamma-SNAP; membrane fu 97.1 0.00079 2.7E-08 60.3 7.2 62 235-296 155-222 (307)
176 1ouv_A Conserved hypothetical 97.0 0.0024 8E-08 55.3 9.2 61 233-295 36-104 (273)
177 2bol_A TSP36, small heat shock 97.0 0.0026 8.8E-08 58.6 9.8 76 6-81 99-191 (314)
178 2xpi_A Anaphase-promoting comp 97.0 0.0019 6.5E-08 62.0 9.2 61 235-295 516-576 (597)
179 3nf1_A KLC 1, kinesin light ch 97.0 0.001 3.6E-08 57.6 6.6 63 233-295 25-95 (311)
180 3ulq_A Response regulator aspa 97.0 0.0011 3.7E-08 60.7 6.9 61 235-295 184-250 (383)
181 3nf1_A KLC 1, kinesin light ch 97.0 0.0011 3.9E-08 57.3 6.7 62 234-295 152-221 (311)
182 3gw4_A Uncharacterized protein 97.0 0.0015 5.2E-08 53.3 7.0 62 234-295 65-133 (203)
183 3q15_A PSP28, response regulat 97.0 0.0013 4.5E-08 60.2 7.3 61 235-295 222-287 (378)
184 3qou_A Protein YBBN; thioredox 97.0 0.002 6.7E-08 57.4 8.0 65 231-295 215-281 (287)
185 2kat_A Uncharacterized protein 97.0 0.0014 5E-08 49.2 6.1 43 253-295 3-45 (115)
186 2kc7_A BFR218_protein; tetratr 96.9 0.0018 6.2E-08 47.1 6.3 42 233-274 32-74 (99)
187 1zu2_A Mitochondrial import re 96.8 0.00067 2.3E-08 56.5 3.5 49 247-295 14-72 (158)
188 2ond_A Cleavage stimulation fa 96.8 0.0038 1.3E-07 55.7 8.6 62 234-295 98-160 (308)
189 2xpi_A Anaphase-promoting comp 96.8 0.0044 1.5E-07 59.4 9.5 62 234-295 372-433 (597)
190 4a1s_A PINS, partner of inscut 96.7 0.0019 6.5E-08 58.9 6.2 60 236-295 87-152 (411)
191 3sf4_A G-protein-signaling mod 96.7 0.0031 1.1E-07 56.7 7.1 60 236-295 228-293 (406)
192 3ro2_A PINS homolog, G-protein 96.6 0.003 1E-07 54.6 6.5 61 235-295 43-109 (338)
193 3q15_A PSP28, response regulat 96.6 0.0027 9.3E-08 58.1 6.1 59 237-295 103-167 (378)
194 1ouv_A Conserved hypothetical 96.5 0.011 3.8E-07 51.0 9.3 60 234-295 73-140 (273)
195 1dce_A Protein (RAB geranylger 96.5 0.0062 2.1E-07 60.2 8.2 66 230-295 102-170 (567)
196 3qww_A SET and MYND domain-con 96.4 0.0052 1.8E-07 58.9 7.2 62 234-295 339-408 (433)
197 4b4t_Q 26S proteasome regulato 96.3 0.0069 2.4E-07 55.6 7.3 62 234-295 3-81 (434)
198 1pc2_A Mitochondria fission pr 96.3 0.0068 2.3E-07 50.0 6.3 63 233-295 30-97 (152)
199 1dce_A Protein (RAB geranylger 96.3 0.014 4.7E-07 57.8 9.6 53 232-284 140-193 (567)
200 2v5f_A Prolyl 4-hydroxylase su 96.3 0.01 3.5E-07 44.7 6.8 45 232-276 43-87 (104)
201 2ond_A Cleavage stimulation fa 96.3 0.013 4.3E-07 52.2 8.4 64 232-295 47-125 (308)
202 3ffl_A Anaphase-promoting comp 96.2 0.017 5.7E-07 48.4 8.1 59 235-293 63-146 (167)
203 3n71_A Histone lysine methyltr 96.1 0.0095 3.3E-07 58.0 7.2 62 234-295 350-419 (490)
204 3dra_A Protein farnesyltransfe 95.9 0.025 8.5E-07 51.6 8.6 65 231-295 63-136 (306)
205 4g1t_A Interferon-induced prot 95.9 0.022 7.4E-07 52.9 8.3 50 232-281 244-293 (472)
206 3qwp_A SET and MYND domain-con 95.9 0.013 4.6E-07 55.8 7.0 62 234-295 328-397 (429)
207 1hz4_A MALT regulatory protein 95.9 0.017 5.7E-07 52.2 7.2 60 236-295 94-161 (373)
208 1klx_A Cysteine rich protein B 95.7 0.063 2.2E-06 42.2 9.1 60 234-295 56-123 (138)
209 3rjv_A Putative SEL1 repeat pr 95.6 0.025 8.7E-07 47.6 7.0 59 234-295 17-79 (212)
210 4f3v_A ESX-1 secretion system 95.4 0.036 1.2E-06 50.2 7.6 60 236-295 172-234 (282)
211 3dra_A Protein farnesyltransfe 95.4 0.039 1.3E-06 50.4 8.0 65 231-295 99-172 (306)
212 3dss_A Geranylgeranyl transfer 95.4 0.068 2.3E-06 49.4 9.7 66 230-295 103-171 (331)
213 3q7a_A Farnesyltransferase alp 95.4 0.052 1.8E-06 50.6 8.9 65 231-295 84-151 (349)
214 3rjv_A Putative SEL1 repeat pr 95.3 0.028 9.5E-07 47.3 6.2 60 235-294 85-154 (212)
215 1hz4_A MALT regulatory protein 95.3 0.061 2.1E-06 48.4 8.8 61 235-295 135-200 (373)
216 3n71_A Histone lysine methyltr 95.2 0.031 1E-06 54.4 6.9 58 238-295 312-377 (490)
217 2bol_A TSP36, small heat shock 95.2 0.05 1.7E-06 50.0 7.8 66 13-78 231-313 (314)
218 4b4t_Q 26S proteasome regulato 94.8 0.051 1.7E-06 49.7 7.0 62 234-295 134-201 (434)
219 2ooe_A Cleavage stimulation fa 94.7 0.12 4.2E-06 49.3 9.5 61 234-295 12-72 (530)
220 2ooe_A Cleavage stimulation fa 94.6 0.082 2.8E-06 50.5 8.1 61 235-295 321-382 (530)
221 4gns_B Protein CSD3, chitin bi 94.6 0.096 3.3E-06 53.6 8.9 58 237-294 339-396 (754)
222 1b89_A Protein (clathrin heavy 94.6 0.012 4.1E-07 56.8 2.0 52 236-295 123-174 (449)
223 3dss_A Geranylgeranyl transfer 94.5 0.089 3E-06 48.6 7.7 64 232-295 61-136 (331)
224 1xi4_A Clathrin heavy chain; a 94.3 0.079 2.7E-06 57.8 7.8 54 235-296 1195-1248(1630)
225 3ly7_A Transcriptional activat 94.3 0.17 5.9E-06 47.5 9.2 63 232-295 274-336 (372)
226 3qww_A SET and MYND domain-con 94.3 0.061 2.1E-06 51.4 6.3 55 241-295 304-366 (433)
227 3bee_A Putative YFRE protein; 94.1 0.081 2.8E-06 39.3 5.4 38 231-268 39-76 (93)
228 3qwp_A SET and MYND domain-con 94.1 0.084 2.9E-06 50.3 6.7 60 236-295 288-355 (429)
229 1xi4_A Clathrin heavy chain; a 93.9 0.1 3.5E-06 56.9 7.7 59 233-296 1103-1161(1630)
230 4f3v_A ESX-1 secretion system 93.5 0.087 3E-06 47.6 5.5 59 237-295 137-197 (282)
231 3q7a_A Farnesyltransferase alp 93.5 0.11 3.7E-06 48.4 6.2 66 230-295 154-234 (349)
232 2xm6_A Protein corresponding t 93.4 0.28 9.5E-06 46.3 9.1 60 234-295 362-429 (490)
233 3mv2_B Coatomer subunit epsilo 93.3 0.27 9.2E-06 45.0 8.5 61 234-294 99-161 (310)
234 3ma5_A Tetratricopeptide repea 92.9 0.11 3.7E-06 38.1 4.3 32 264-295 2-33 (100)
235 3ffl_A Anaphase-promoting comp 92.6 0.21 7.1E-06 41.7 6.0 60 236-295 21-89 (167)
236 2xm6_A Protein corresponding t 92.5 0.44 1.5E-05 44.9 9.1 59 235-295 75-141 (490)
237 1klx_A Cysteine rich protein B 92.5 0.3 1E-05 38.2 6.7 53 241-295 31-87 (138)
238 3e4b_A ALGK; tetratricopeptide 92.1 0.3 1E-05 46.1 7.3 61 235-295 176-243 (452)
239 3e4b_A ALGK; tetratricopeptide 89.3 1 3.5E-05 42.3 8.2 58 235-295 248-313 (452)
240 1nzn_A CGI-135 protein, fissio 87.7 0.99 3.4E-05 35.8 5.7 61 234-294 34-99 (126)
241 1pc2_A Mitochondria fission pr 87.2 1.7 5.9E-05 35.4 7.2 46 234-279 70-115 (152)
242 3o48_A Mitochondria fission 1 87.1 0.76 2.6E-05 36.8 4.8 62 234-295 39-104 (134)
243 3ly7_A Transcriptional activat 86.4 1.5 5.2E-05 41.0 7.2 49 233-281 194-245 (372)
244 2ff4_A Probable regulatory pro 86.3 1.9 6.6E-05 40.1 8.0 59 237-295 173-231 (388)
245 3mv2_B Coatomer subunit epsilo 86.1 1.1 3.9E-05 40.8 6.0 51 241-294 182-236 (310)
246 2w2u_A Hypothetical P60 katani 85.7 3.3 0.00011 30.1 7.3 30 235-264 19-48 (83)
247 1b89_A Protein (clathrin heavy 84.6 2.1 7.3E-05 41.0 7.4 47 237-288 150-196 (449)
248 1y8m_A FIS1; mitochondria, unk 84.5 1.6 5.4E-05 35.4 5.5 63 233-295 37-103 (144)
249 2v6y_A AAA family ATPase, P60 84.5 4.2 0.00015 29.5 7.4 30 235-264 11-40 (83)
250 1nzn_A CGI-135 protein, fissio 83.8 3.5 0.00012 32.5 7.2 45 235-279 74-118 (126)
251 3u64_A Protein TP_0956; tetrat 82.6 1.7 5.8E-05 39.5 5.5 62 234-295 198-266 (301)
252 4a5x_A MITD1, MIT domain-conta 80.9 2.2 7.6E-05 31.3 4.7 32 233-264 14-45 (86)
253 2v6x_A Vacuolar protein sortin 75.4 4 0.00014 29.5 4.7 31 234-264 12-42 (85)
254 1ya0_A SMG-7 transcript varian 75.3 8.9 0.00031 37.1 8.4 59 237-295 154-212 (497)
255 1wfd_A Hypothetical protein 15 75.1 4.1 0.00014 30.2 4.7 31 234-264 14-44 (93)
256 4b4t_R RPN7, 26S proteasome re 73.8 2.4 8.2E-05 40.0 3.9 60 236-295 132-194 (429)
257 3ax2_A Mitochondrial import re 73.0 6.4 0.00022 28.0 5.0 30 239-268 21-50 (73)
258 2cpt_A SKD1 protein, vacuolar 71.6 4.7 0.00016 31.3 4.4 31 234-264 17-47 (117)
259 3txn_A 26S proteasome regulato 70.8 9.6 0.00033 35.8 7.2 57 240-296 104-166 (394)
260 4e6h_A MRNA 3'-END-processing 70.5 7.1 0.00024 39.2 6.6 62 234-295 342-404 (679)
261 3o48_A Mitochondria fission 1 69.9 13 0.00045 29.5 6.8 46 235-280 78-123 (134)
262 3mkq_B Coatomer subunit alpha; 68.5 17 0.00057 30.3 7.5 60 234-293 33-113 (177)
263 1y8m_A FIS1; mitochondria, unk 67.0 17 0.00057 29.3 6.9 46 234-279 76-121 (144)
264 2vkj_A TM1634; membrane protei 66.1 12 0.0004 27.9 5.3 34 233-266 51-84 (106)
265 2cfu_A SDSA1; SDS-hydrolase, l 64.6 12 0.00041 37.4 6.9 50 235-284 449-498 (658)
266 2crb_A Nuclear receptor bindin 62.8 7.7 0.00026 29.0 3.8 29 235-263 15-43 (97)
267 3u64_A Protein TP_0956; tetrat 62.7 10 0.00035 34.3 5.4 46 251-296 179-231 (301)
268 1om2_A Protein (mitochondrial 61.0 7 0.00024 29.3 3.3 29 239-267 24-52 (95)
269 2rpa_A Katanin P60 ATPase-cont 53.0 9.6 0.00033 27.4 2.8 27 238-264 15-41 (78)
270 2ff4_A Probable regulatory pro 43.6 94 0.0032 28.4 8.9 58 237-294 117-196 (388)
271 3mkq_A Coatomer beta'-subunit; 42.2 83 0.0028 30.6 8.8 62 233-294 679-761 (814)
272 2ymb_A MITD1, MIT domain-conta 40.3 5.9 0.0002 35.1 0.0 35 230-264 18-52 (257)
273 3t5x_A PCI domain-containing p 37.6 83 0.0028 26.2 6.9 36 235-270 14-49 (203)
274 2o8p_A 14-3-3 domain containin 36.6 1E+02 0.0035 26.5 7.3 50 246-295 136-194 (227)
275 2ijq_A Hypothetical protein; s 36.3 1.4E+02 0.0049 24.1 7.8 59 237-295 34-101 (161)
276 4e6h_A MRNA 3'-END-processing 35.8 1.3E+02 0.0045 29.9 9.1 63 233-295 64-129 (679)
277 2yhe_A SEC-alkyl sulfatase; hy 39.3 9.1 0.00031 38.5 0.0 52 235-286 461-512 (668)
278 3kae_A CDC27, possible protein 31.8 1.6E+02 0.0054 24.8 7.3 49 240-293 38-86 (242)
279 4gq2_M Nucleoporin NUP120; bet 31.8 87 0.003 32.5 7.2 52 240-295 815-866 (950)
280 3lvg_A Clathrin heavy chain 1; 27.2 0.32 1.1E-05 47.7 -11.2 54 234-295 143-196 (624)
281 2jpu_A ORF C02003 protein; sol 27.1 74 0.0025 25.0 4.4 30 234-263 6-35 (129)
282 2crb_A Nuclear receptor bindin 26.7 74 0.0025 23.6 4.0 28 268-295 14-41 (97)
283 4g26_A Pentatricopeptide repea 26.7 2.3E+02 0.0079 26.7 8.8 59 235-293 140-199 (501)
284 3myv_A SUSD superfamily protei 25.5 1.2E+02 0.0042 28.2 6.5 28 268-295 189-216 (454)
285 2br9_A 14-3-3E, 14-3-3 protein 25.5 1.5E+02 0.0051 25.5 6.5 44 252-295 147-199 (234)
286 2npm_A 14-3-3 domain containin 25.4 1.4E+02 0.0048 26.2 6.4 44 252-295 173-224 (260)
287 3mkq_B Coatomer subunit alpha; 23.4 2.9E+02 0.0099 22.6 7.6 50 241-295 11-60 (177)
288 4g26_A Pentatricopeptide repea 23.3 3.3E+02 0.011 25.5 9.2 60 235-294 105-165 (501)
289 3kez_A Putative sugar binding 22.7 1.4E+02 0.0047 27.9 6.2 28 268-295 195-222 (461)
290 3dza_A Uncharacterized putativ 22.2 1.1E+02 0.0039 25.5 4.9 59 236-294 109-175 (191)
291 2uy1_A Cleavage stimulation fa 22.2 1.6E+02 0.0056 27.6 6.7 38 235-273 213-250 (493)
292 1o9d_A 14-3-3-like protein C; 22.1 1.9E+02 0.0063 25.4 6.5 44 252-295 152-204 (260)
293 4fhn_B Nucleoporin NUP120; pro 22.1 1.2E+02 0.004 32.0 6.2 50 242-295 819-868 (1139)
294 3mcx_A SUSD superfamily protei 22.0 1.3E+02 0.0046 28.1 6.1 28 268-295 201-228 (477)
295 2pmr_A Uncharacterized protein 20.9 1.3E+02 0.0044 21.9 4.4 28 234-261 38-65 (87)
296 2oo2_A Hypothetical protein AF 20.8 1.3E+02 0.0045 21.8 4.4 28 234-261 34-61 (86)
297 3txn_A 26S proteasome regulato 20.1 2.6E+02 0.0087 25.9 7.4 60 236-295 140-207 (394)
298 3uzd_A 14-3-3 protein gamma; s 20.0 2.2E+02 0.0076 24.7 6.5 44 252-295 148-200 (248)
No 1
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=99.89 E-value=4.2e-23 Score=168.99 Aligned_cols=114 Identities=15% Similarity=0.214 Sum_probs=73.8
Q ss_pred CCcccCCcEEEeeCCEEEEEEEeC-CCCCCcceEEeeccEEEEeecce-EEeecccCCcccCCceEEeeCCEEEEEEeec
Q psy5819 1 MPIIVKESCWRQTPSKVFITVPLY-NVPTHKVDVFTSESYIKLHYGNY-IFEKLLLRPIVEEASRIRLENNEAEFELIKS 78 (296)
Q Consensus 1 Mp~~~~~y~W~QT~~~V~i~V~l~-~~~~~~~~V~~~~~~lkv~~~~~-~~~~~L~~~Id~e~S~~~i~~~~v~i~L~K~ 78 (296)
||. .+.|.|+||.++|+|+|+|| |+.++++.|.++..+|+|++.+. +|+++||++|++++|+|++.+++|+|+|.|+
T Consensus 1 m~~-~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~g~~~~~~~L~~~I~~e~S~w~i~~~kv~i~L~K~ 79 (131)
T 2o30_A 1 MPS-EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQGEIVIDGELLHEVDVSSLWWVINGDVVDVNVTKK 79 (131)
T ss_dssp -----CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEETTEEEEEEEBSSCEEEEEEEEEEETTEEEEEEEES
T ss_pred CCC-CCcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEECCEeeEccccccccccccCEEEEeCCEEEEEEEEC
Confidence 885 78999999999999999997 88899999999999999987522 8899999999999999999999999999999
Q ss_pred Cccccccc-c----chhhhHH---HHHhhhhcHHHHHHHHHhHHH
Q psy5819 79 EQAMWDEK-K----DKRSKEA---VSVQMKLETQEQTDVSNMKER 115 (296)
Q Consensus 79 ~~~~W~~L-k----~e~~k~~---~~~~~~le~e~R~~ie~~k~~ 115 (296)
...+|++| + .+..+.. ..++++||+++|.+|++|.-+
T Consensus 80 ~~~~W~~L~~~~~~id~~k~~~e~~~~l~dld~e~~~~v~k~~~d 124 (131)
T 2o30_A 80 RNEWWDSLLVGSESVDVQKLAENKHADMSMLDAEAREVVEKMMHN 124 (131)
T ss_dssp SCCCCSCSBC-----------------------------------
T ss_pred CCCCCccccCCCCCCCHhHcCcccccccccCCHHHHHHHHHHHHH
Confidence 66679999 2 1222222 234899999999999998776
No 2
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=99.85 E-value=6.3e-22 Score=161.97 Aligned_cols=109 Identities=17% Similarity=0.215 Sum_probs=92.6
Q ss_pred cCCcEEEeeCCEEEEEEEeC-C--CCCCcceEEeeccEEEEeec--ceEEeecccCCcccCCceEEeeCC-EEEEEEeec
Q psy5819 5 VKESCWRQTPSKVFITVPLY-N--VPTHKVDVFTSESYIKLHYG--NYIFEKLLLRPIVEEASRIRLENN-EAEFELIKS 78 (296)
Q Consensus 5 ~~~y~W~QT~~~V~i~V~l~-~--~~~~~~~V~~~~~~lkv~~~--~~~~~~~L~~~Id~e~S~~~i~~~-~v~i~L~K~ 78 (296)
.+.|.|+||.++|+|+|+|| + ++.+++.|.++..+|+|++. +++|+++||++|++++|+|++.++ .|+|+|.|+
T Consensus 7 ~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg~~~~~~~~L~~~I~~e~s~w~i~~~k~v~i~L~K~ 86 (131)
T 1wfi_A 7 GPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLEKI 86 (131)
T ss_dssp CCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTSCCSBCSCBSSCBCSTTCEEEEETTTEEEEEEEBS
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECCceEEEecccccccccccCEEEEcCCCEEEEEEEEC
Confidence 57899999999999999999 6 78899999999999999984 478999999999999999999997 699999999
Q ss_pred Ccc-ccccc-cc----hhhh--HHHHHhhhhcHHHHHHHHHhH
Q psy5819 79 EQA-MWDEK-KD----KRSK--EAVSVQMKLETQEQTDVSNMK 113 (296)
Q Consensus 79 ~~~-~W~~L-k~----e~~k--~~~~~~~~le~e~R~~ie~~k 113 (296)
+++ +|++| +. +-.+ ....++.|||+++|.+||+|.
T Consensus 87 ~~~~~W~~L~~~~~~id~~ki~pe~~~~~dld~e~r~~vekmm 129 (131)
T 1wfi_A 87 NKMEWWNRLVTSDPEINTKKINPENSKLSDLDSETRSMVSGPS 129 (131)
T ss_dssp SSCCCCSCSBSSCCSCCCSSSSCCCCSCCCCCCCCCCCCCCCC
T ss_pred CCCCCChhhhcCCCCCCccEecCCCCCcccCCHHHHHHHHHHh
Confidence 986 89999 11 0001 012346999999999999874
No 3
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.79 E-value=2.6e-19 Score=137.05 Aligned_cols=81 Identities=19% Similarity=0.328 Sum_probs=77.0
Q ss_pred CCcEEEeeCCEEEEEEEeCCCCCCcceEEeeccEEEEeec-----ceEEeecccCCcccCCceEEeeCCEEEEEEeecCc
Q psy5819 6 KESCWRQTPSKVFITVPLYNVPTHKVDVFTSESYIKLHYG-----NYIFEKLLLRPIVEEASRIRLENNEAEFELIKSEQ 80 (296)
Q Consensus 6 ~~y~W~QT~~~V~i~V~l~~~~~~~~~V~~~~~~lkv~~~-----~~~~~~~L~~~Id~e~S~~~i~~~~v~i~L~K~~~ 80 (296)
++|.|+||.+.|+|+|+++|+...++.|.+++++|+|++. +|.++++||++|++++|+|++.+++|+|+|.|+++
T Consensus 3 ~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i~L~K~~~ 82 (92)
T 2xcm_C 3 YRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPGEDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKADI 82 (92)
T ss_dssp SEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTTSCCEEECCBBSSCBCGGGCEEEECSSCEEEEEEBSSS
T ss_pred ccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCCCcEEEEeeEcCCccCchhEEEEEECCEEEEEEEcCCC
Confidence 5799999999999999999998899999999999999874 58999999999999999999999999999999999
Q ss_pred cccccc
Q psy5819 81 AMWDEK 86 (296)
Q Consensus 81 ~~W~~L 86 (296)
++|++|
T Consensus 83 ~~W~~L 88 (92)
T 2xcm_C 83 ITWASL 88 (92)
T ss_dssp CCCSCS
T ss_pred Ccchhc
Confidence 999998
No 4
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=99.78 E-value=8.3e-19 Score=141.54 Aligned_cols=82 Identities=18% Similarity=0.256 Sum_probs=76.6
Q ss_pred cCCcEEEeeCCEEEEEEEeC-C--CCCCcceEEeeccEEEEeec--ceEEeecccCCcccCCceEEeeCC-EEEEEEeec
Q psy5819 5 VKESCWRQTPSKVFITVPLY-N--VPTHKVDVFTSESYIKLHYG--NYIFEKLLLRPIVEEASRIRLENN-EAEFELIKS 78 (296)
Q Consensus 5 ~~~y~W~QT~~~V~i~V~l~-~--~~~~~~~V~~~~~~lkv~~~--~~~~~~~L~~~Id~e~S~~~i~~~-~v~i~L~K~ 78 (296)
.+.|.|+||.++|+|+|+|| + ++.++++|.++..+|+|++. +++|+++||++|++++|+|++.++ .|+|+|.|+
T Consensus 16 ~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg~~~~~~g~L~~~I~~deS~w~i~~~~~i~i~L~K~ 95 (121)
T 3qor_A 16 LPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGELYNEVKVEESSWLIADGAVVTVHLEKI 95 (121)
T ss_dssp CSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETTSCCSEEEEBSSCBCGGGCEEEEETTTEEEEEEEBS
T ss_pred CCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcCcceEEeccccccccccccEEEEcCCCEEEEEEEEC
Confidence 57899999999999999999 5 78899999999999999986 689999999999999999999986 999999999
Q ss_pred Ccc-ccccc
Q psy5819 79 EQA-MWDEK 86 (296)
Q Consensus 79 ~~~-~W~~L 86 (296)
+.+ +|++|
T Consensus 96 ~~~~~W~~L 104 (121)
T 3qor_A 96 NKMEWWSRL 104 (121)
T ss_dssp SSSCCCSCS
T ss_pred CCCCCChhh
Confidence 886 79999
No 5
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=99.76 E-value=2e-18 Score=139.85 Aligned_cols=82 Identities=24% Similarity=0.296 Sum_probs=76.0
Q ss_pred cCCcEEEeeCCEEEEEEEeC-CC-CCCcceEEeeccEEEEeec-----ceEEeecccCCcccCCceEEeeCCE-EEEEEe
Q psy5819 5 VKESCWRQTPSKVFITVPLY-NV-PTHKVDVFTSESYIKLHYG-----NYIFEKLLLRPIVEEASRIRLENNE-AEFELI 76 (296)
Q Consensus 5 ~~~y~W~QT~~~V~i~V~l~-~~-~~~~~~V~~~~~~lkv~~~-----~~~~~~~L~~~Id~e~S~~~i~~~~-v~i~L~ 76 (296)
++.|.|+||.++|+|+|+|+ ++ ..+++.|.++..+|+|++. +++|+++||++|++++|+|++.+++ |+|+|.
T Consensus 19 ~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~~~~~~~~~L~~~I~~e~S~w~i~~~k~v~i~L~ 98 (124)
T 1wgv_A 19 RENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLMEGKLTHKINTESSLWSLEPGKCVLVNLS 98 (124)
T ss_dssp CSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSSEEEEEEEEBSSCBCTTTCEEEECTTSEEEEEEC
T ss_pred CCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccCCCceEEcccccCcCCCcCCEEEEeCCCEEEEEEE
Confidence 57899999999999999998 77 7899999999999999872 4789999999999999999999886 999999
Q ss_pred ecCccccccc
Q psy5819 77 KSEQAMWDEK 86 (296)
Q Consensus 77 K~~~~~W~~L 86 (296)
|++..+|++|
T Consensus 99 K~~~~~W~~L 108 (124)
T 1wgv_A 99 KVGEYWWNAI 108 (124)
T ss_dssp BSSSCCCSCS
T ss_pred ECCCCCCcCc
Confidence 9988889999
No 6
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.76 E-value=1.2e-18 Score=138.68 Aligned_cols=86 Identities=30% Similarity=0.402 Sum_probs=77.2
Q ss_pred CCcc-cCCcEEEeeCCEEEEEEEeCCCCCCcceEEeeccEEEEeec-----ceEEeecccCCcccCCceEEeeCCEEEEE
Q psy5819 1 MPII-VKESCWRQTPSKVFITVPLYNVPTHKVDVFTSESYIKLHYG-----NYIFEKLLLRPIVEEASRIRLENNEAEFE 74 (296)
Q Consensus 1 Mp~~-~~~y~W~QT~~~V~i~V~l~~~~~~~~~V~~~~~~lkv~~~-----~~~~~~~L~~~Id~e~S~~~i~~~~v~i~ 74 (296)
|+.. .+.|+|+||.+.|+|+|++||+...++.|.+++.+|+|++. +|.++++||++|++++|+|++.+++|+|+
T Consensus 4 m~~~~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~ 83 (114)
T 1rl1_A 4 MTHQSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLHPIIPEQSTFKVLSTKIEIK 83 (114)
T ss_dssp ----CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTTSSEEEEEECBSSCCCGGGEEEEECSSSEEEE
T ss_pred CCCCCCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCCCcEEEEEeeCCCcCCccccEEEEECCEEEEE
Confidence 5532 26799999999999999999998899999999999999863 68999999999999999999999999999
Q ss_pred EeecCccccccc
Q psy5819 75 LIKSEQAMWDEK 86 (296)
Q Consensus 75 L~K~~~~~W~~L 86 (296)
|.|+++++|++|
T Consensus 84 L~K~~~~~W~~L 95 (114)
T 1rl1_A 84 LKKPEAVRWEKL 95 (114)
T ss_dssp EECSSCCCCSSS
T ss_pred EEcCCCCcCccc
Confidence 999999999999
No 7
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=5.7e-18 Score=137.68 Aligned_cols=84 Identities=26% Similarity=0.336 Sum_probs=77.5
Q ss_pred ccCCcEEEeeCCEEEEEEEeCCC---CCCcceEEeeccEEEEeec-----ceEEeec-ccCCcccCCceEEeeCCEEEEE
Q psy5819 4 IVKESCWRQTPSKVFITVPLYNV---PTHKVDVFTSESYIKLHYG-----NYIFEKL-LLRPIVEEASRIRLENNEAEFE 74 (296)
Q Consensus 4 ~~~~y~W~QT~~~V~i~V~l~~~---~~~~~~V~~~~~~lkv~~~-----~~~~~~~-L~~~Id~e~S~~~i~~~~v~i~ 74 (296)
.+++|.|+||.+.|+|+|+++++ ...++.|.++..+|+|++. +|.|+++ ||++|++++|+|++.+++|+|+
T Consensus 19 ~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~~v~~~kVei~ 98 (127)
T 1x5m_A 19 KISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLIL 98 (127)
T ss_dssp ECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCSSSCEEEEEECBSSCCCTTTCEEEEETTEEEEE
T ss_pred CccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCCCCcEEEEhHHhcCccCcccCEEEEeCCEEEEE
Confidence 35799999999999999999998 7889999999999999874 5899985 9999999999999999999999
Q ss_pred EeecCcc-cccccc
Q psy5819 75 LIKSEQA-MWDEKK 87 (296)
Q Consensus 75 L~K~~~~-~W~~Lk 87 (296)
|.|++++ +|++|.
T Consensus 99 L~K~~~~~~W~~L~ 112 (127)
T 1x5m_A 99 CRKKVENTRWDYLT 112 (127)
T ss_dssp EECSSSSCCCSSSB
T ss_pred EEECCCCCCCCccc
Confidence 9999988 799993
No 8
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=99.74 E-value=7.4e-18 Score=141.86 Aligned_cols=86 Identities=20% Similarity=0.320 Sum_probs=77.9
Q ss_pred CCcccCCcEEEeeCCEEEEEEEeC-CCCCCcceEEeeccEEEEeecc-eEEeecccCCcccCCceEEeeCCE-EEEEEee
Q psy5819 1 MPIIVKESCWRQTPSKVFITVPLY-NVPTHKVDVFTSESYIKLHYGN-YIFEKLLLRPIVEEASRIRLENNE-AEFELIK 77 (296)
Q Consensus 1 Mp~~~~~y~W~QT~~~V~i~V~l~-~~~~~~~~V~~~~~~lkv~~~~-~~~~~~L~~~Id~e~S~~~i~~~~-v~i~L~K 77 (296)
+|...+.|.|+||.++|+|+|+|| +++.+++.|.++..+|+|++.. .+|+++||++|++++|+|++.+++ |+|+|.|
T Consensus 9 ~~~~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~kg~~~l~g~L~~~I~~eeS~w~i~~~k~v~I~L~K 88 (157)
T 2rh0_A 9 VPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGREILKGKLFDSTIADEGTWTLEDRKMVRIVLTK 88 (157)
T ss_dssp CCEECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEETTEEEEEEEBSSCBCGGGCEEEEECCCEEEEEEEB
T ss_pred ccCCCCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEECCEEEEeeccccccCccccEEEEcCCcEEEEEEEE
Confidence 455578999999999999999998 8888999999999999998752 468999999999999999999987 9999999
Q ss_pred cCc---cccccc
Q psy5819 78 SEQ---AMWDEK 86 (296)
Q Consensus 78 ~~~---~~W~~L 86 (296)
++. .+|++|
T Consensus 89 ~~~~~~~~W~~L 100 (157)
T 2rh0_A 89 TKRDAANCWTSL 100 (157)
T ss_dssp SSCSTTCCCSEE
T ss_pred cCCCcCCcChhh
Confidence 987 479999
No 9
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.73 E-value=1.1e-17 Score=137.13 Aligned_cols=82 Identities=15% Similarity=0.190 Sum_probs=77.2
Q ss_pred cCCcEEEee-CCEEEEEEEeCCCCCCcceEEeeccEEEEeec-----------------ceEEeecccCCcccCCceEEe
Q psy5819 5 VKESCWRQT-PSKVFITVPLYNVPTHKVDVFTSESYIKLHYG-----------------NYIFEKLLLRPIVEEASRIRL 66 (296)
Q Consensus 5 ~~~y~W~QT-~~~V~i~V~l~~~~~~~~~V~~~~~~lkv~~~-----------------~~~~~~~L~~~Id~e~S~~~i 66 (296)
.++|.|+|| .+.|+|+|+++++...++.|.++..+|+|++. .|.|+++||++|+|++|+|++
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~v 98 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFCF 98 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEEE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEEEE
Confidence 478999999 99999999999999999999999999999863 588899999999999999999
Q ss_pred eCCEEEEEEeecCccccccc
Q psy5819 67 ENNEAEFELIKSEQAMWDEK 86 (296)
Q Consensus 67 ~~~~v~i~L~K~~~~~W~~L 86 (296)
.+++|+|+|.|+++++|++|
T Consensus 99 ~~~kIeI~L~K~e~~~W~~L 118 (134)
T 1wh0_A 99 TASRIDICLRKRQSQRWGGL 118 (134)
T ss_dssp CSSEEEEEEEESSSCCCSCS
T ss_pred eCCEEEEEEEECCCCccccc
Confidence 99999999999998889999
No 10
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=99.70 E-value=2.2e-17 Score=133.82 Aligned_cols=80 Identities=19% Similarity=0.183 Sum_probs=73.4
Q ss_pred cC-CcEEEeeCCEEEEEEEeCCCCCCcceEEeeccEEEEeec------ceEEeecccCCcccCCceEEeeCCEEEEEEee
Q psy5819 5 VK-ESCWRQTPSKVFITVPLYNVPTHKVDVFTSESYIKLHYG------NYIFEKLLLRPIVEEASRIRLENNEAEFELIK 77 (296)
Q Consensus 5 ~~-~y~W~QT~~~V~i~V~l~~~~~~~~~V~~~~~~lkv~~~------~~~~~~~L~~~Id~e~S~~~i~~~~v~i~L~K 77 (296)
+| .|.|+||.+.|+|+|+++++ .++.|.++..+|+|++. +|.|+++||++|+|++|+|++.+++|+|+|.|
T Consensus 2 ~P~~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~~~y~~~l~L~~~I~~e~S~~~v~~~kiei~L~K 79 (125)
T 1ejf_A 2 QPASAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRSILCCLRK 79 (125)
T ss_dssp BCCCEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTTTEEEEEEEEBSSCEEEEEEEEEECSSCEEEEEEE
T ss_pred CCCceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCCCceEEEEEEccceeccccCEEEECCCEEEEEEEE
Confidence 35 89999999999999999996 68899999999998852 48999999999999999999999999999999
Q ss_pred cCcc-ccccc
Q psy5819 78 SEQA-MWDEK 86 (296)
Q Consensus 78 ~~~~-~W~~L 86 (296)
++++ +|++|
T Consensus 80 ~~~~~~W~rL 89 (125)
T 1ejf_A 80 GESGQSWPRL 89 (125)
T ss_dssp SSTTCCCSSS
T ss_pred CCCCCCCCce
Confidence 9876 79999
No 11
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.69 E-value=3.4e-17 Score=136.75 Aligned_cols=82 Identities=22% Similarity=0.331 Sum_probs=75.0
Q ss_pred CCcccCCcEEEeeCCEEEEEEEeCCCCCCcceEEee-ccEEEEeec-----ceEEeecccCCcccCCceEEeeCCEEEEE
Q psy5819 1 MPIIVKESCWRQTPSKVFITVPLYNVPTHKVDVFTS-ESYIKLHYG-----NYIFEKLLLRPIVEEASRIRLENNEAEFE 74 (296)
Q Consensus 1 Mp~~~~~y~W~QT~~~V~i~V~l~~~~~~~~~V~~~-~~~lkv~~~-----~~~~~~~L~~~Id~e~S~~~i~~~~v~i~ 74 (296)
|++ +|.|.|+||.+.|+|+|.++++ .++.|.++ ..+|+|++. .|.|+++||++|+|+ |+|++.+++|+|+
T Consensus 1 m~~-~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~~~~~~~y~~~l~L~~~Idpe-S~~~v~~~kIei~ 76 (150)
T 2kmw_A 1 SSR-NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIMTE-YRKNVGLRNIIFS 76 (150)
T ss_dssp CEE-CCCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEETTTTEEEEEEEEBSSCEEEE-EEEEEESSSEEEE
T ss_pred CCc-CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEEcCCCceEEEEeEhhhccccc-ceEEecCCEEEEE
Confidence 775 7899999999999999999997 47888888 688888763 589999999999999 9999999999999
Q ss_pred EeecCccccccc
Q psy5819 75 LIKSEQAMWDEK 86 (296)
Q Consensus 75 L~K~~~~~W~~L 86 (296)
|.|+++++|++|
T Consensus 77 L~K~e~~~W~rL 88 (150)
T 2kmw_A 77 IQKEERSWWTRL 88 (150)
T ss_dssp EEECCSSCCSCS
T ss_pred EEECCCCcCccc
Confidence 999999899999
No 12
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.1e-16 Score=131.35 Aligned_cols=81 Identities=25% Similarity=0.405 Sum_probs=66.2
Q ss_pred ccCCcEEEeeCCE-------EEEEEEeCCCCCCcceEEeeccEEEEee-----------cceEEeecccCCcccCCceEE
Q psy5819 4 IVKESCWRQTPSK-------VFITVPLYNVPTHKVDVFTSESYIKLHY-----------GNYIFEKLLLRPIVEEASRIR 65 (296)
Q Consensus 4 ~~~~y~W~QT~~~-------V~i~V~l~~~~~~~~~V~~~~~~lkv~~-----------~~~~~~~~L~~~Id~e~S~~~ 65 (296)
+.|.|.|+||.+. |+|+|+++++. ++.|.++..+|+|++ ..|.|+++||++|+|++|+|+
T Consensus 5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~~ 82 (134)
T 2cg9_X 5 INPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKPSYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMHK 82 (134)
T ss_dssp ------CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCSSEEEECCEEC-------CEEBCEEEECSSCCCSSSEEEE
T ss_pred cCCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEECCEEEEEEecccccCCccCceEEEEEEChhhccccccEEE
Confidence 3689999999988 99999999974 778888888888863 248999999999999999999
Q ss_pred eeCCE-EEEEEeecCc--cccccc
Q psy5819 66 LENNE-AEFELIKSEQ--AMWDEK 86 (296)
Q Consensus 66 i~~~~-v~i~L~K~~~--~~W~~L 86 (296)
+.+++ |+|+|.|+++ .+|++|
T Consensus 83 v~~~~~vei~L~K~~~~~~~W~rL 106 (134)
T 2cg9_X 83 VANGQHYFLKLYKKDLESEYWPRL 106 (134)
T ss_dssp ECCC--CEEEEEECSSSSCCCSCS
T ss_pred ECCCEEEEEEEEECCCCCCCCCce
Confidence 99999 9999999994 479999
No 13
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.23 E-value=2.9e-11 Score=96.18 Aligned_cols=61 Identities=18% Similarity=0.294 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+++.|+.+|+.|+|.+|+.+|++||+++|.++.+|+|+|.||+.+|+|.+|+.+|.+|
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~a 68 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKA 68 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 6778999999999999999999999999999999999999999999999999999999886
No 14
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.19 E-value=6.6e-11 Score=94.16 Aligned_cols=63 Identities=33% Similarity=0.516 Sum_probs=58.6
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..++.++++|+.+|+.|+|.+|+.+|++||+++|.++.+|+|+|.||+.+|++.+|+.+|.+|
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 73 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTC 73 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHH
Confidence 347889999999999999999999999999999999999999999999999999999999876
No 15
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.02 E-value=6.1e-10 Score=93.57 Aligned_cols=62 Identities=13% Similarity=0.155 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-------ChH-----HHHHHHHHHHHcCCHHHHHHHHHhcC
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPN-------LAC-----LYSNRAAAHLALNNLHKAVDDASEVR 296 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~-------~~~-----ly~NRA~~~lkl~~~~~Ai~D~~~A~ 296 (296)
+..+++.|+.+|+.|+|.+|+.+|++||+++|+ +.. +|+|||.|+.++|+|.+|+.+|++|+
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL 84 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKAL 84 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 677899999999999999999999999999999 444 99999999999999999999999873
No 16
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.96 E-value=9.8e-10 Score=89.66 Aligned_cols=63 Identities=29% Similarity=0.468 Sum_probs=59.3
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------------------CCCChHHHHHHHHHHHHcCCHHHHHHHHHh
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQL------------------CPNLACLYSNRAAAHLALNNLHKAVDDASE 294 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~------------------~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~ 294 (296)
..+..+++.|+.+|+.|+|..|+..|++||.+ +|.++.+|+|+|.||+++|+|.+|+.+|.+
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 35788999999999999999999999999999 777889999999999999999999999998
Q ss_pred c
Q psy5819 295 V 295 (296)
Q Consensus 295 A 295 (296)
|
T Consensus 89 a 89 (162)
T 3rkv_A 89 V 89 (162)
T ss_dssp H
T ss_pred H
Confidence 6
No 17
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.90 E-value=5.9e-09 Score=81.06 Aligned_cols=61 Identities=13% Similarity=0.248 Sum_probs=31.7
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHh
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASE 294 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~ 294 (296)
++..+...|..++..|+|..|+..|.++|.++|.++.+|+++|.||..+|++.+|+..+.+
T Consensus 37 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~ 97 (126)
T 3upv_A 37 DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDA 97 (126)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 3444555555555555555555555555555555555555555555555555555555444
No 18
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.83 E-value=1.4e-08 Score=76.24 Aligned_cols=62 Identities=26% Similarity=0.387 Sum_probs=58.9
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|..|+..|.++|.++|.++.+|+|+|.||+.+|+|.+|+..+.+|
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 64 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQG 64 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 35778899999999999999999999999999999999999999999999999999999876
No 19
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.83 E-value=1.5e-08 Score=82.09 Aligned_cols=83 Identities=13% Similarity=0.250 Sum_probs=75.1
Q ss_pred ccCCcEEEeeCCEEEEEEEeCCCC--CCcceEEeeccEEEEeecceEEeecccCCc-ccCCceEEe--eCCEEEEEEeec
Q psy5819 4 IVKESCWRQTPSKVFITVPLYNVP--THKVDVFTSESYIKLHYGNYIFEKLLLRPI-VEEASRIRL--ENNEAEFELIKS 78 (296)
Q Consensus 4 ~~~~y~W~QT~~~V~i~V~l~~~~--~~~~~V~~~~~~lkv~~~~~~~~~~L~~~I-d~e~S~~~i--~~~~v~i~L~K~ 78 (296)
+.|.|+-+|+++.|+|.|.+|.++ .++++|.+.+..|.++.+||.+-+.|.++| +.+.++.+. ..+.+.|+|.|.
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~~PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~VtLpK~ 81 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLSPYYLRLRFPHELIDDERSTAQYDSKDECINVKVAKL 81 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECSSSSCEEECCSSCEECCSSCEEEEETTTTEEEEEEEES
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEecCCeEEEecCCCeeecCCCcceeEeccCCEEEEEEeCC
Confidence 579999999999999999999988 789999999999999999999999999999 666655554 568999999999
Q ss_pred Cccc-cccc
Q psy5819 79 EQAM-WDEK 86 (296)
Q Consensus 79 ~~~~-W~~L 86 (296)
.+|. |+-|
T Consensus 82 ~~Ge~F~dL 90 (134)
T 2k8q_A 82 NKNEYFEDL 90 (134)
T ss_dssp STTCCCSST
T ss_pred CCCCCCCCc
Confidence 9996 9888
No 20
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.77 E-value=3.9e-08 Score=81.11 Aligned_cols=64 Identities=17% Similarity=0.073 Sum_probs=41.0
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+.++..+...|..++..|+|.+|+.+|.+||.++|+++.+|+|+|.||+.+|++.+|+..+.+|
T Consensus 67 P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~a 130 (151)
T 3gyz_A 67 FYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELV 130 (151)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3445566666666666666666666666666666666666666666666666666666666554
No 21
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.74 E-value=5e-08 Score=77.26 Aligned_cols=65 Identities=14% Similarity=0.143 Sum_probs=61.5
Q ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 231 EENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+.++..+...|..+++.|+|..|+..|.+||+++|.++.+|+|+|.||..+|+|.+|+.++.+|
T Consensus 43 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~a 107 (126)
T 4gco_A 43 DPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDA 107 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 34568899999999999999999999999999999999999999999999999999999999876
No 22
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.74 E-value=3.7e-08 Score=81.21 Aligned_cols=83 Identities=10% Similarity=-0.086 Sum_probs=69.4
Q ss_pred HHHHHHHHcCCcccCCCcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHH
Q psy5819 213 KQAEARQACGFIAADLRPEENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDA 292 (296)
Q Consensus 213 ~~~~a~~~~~~~~~d~~~~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~ 292 (296)
.......+...-..-+...+.++..+...|..+++.|+|.+|+..|.+++.++|.++.+|+|+|.||..+|+|.+|+..+
T Consensus 14 ~l~~~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~ 93 (151)
T 3gyz_A 14 AVIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLY 93 (151)
T ss_dssp HHHHHHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHH
Confidence 33344443333334445556678899999999999999999999999999999999999999999999999999999999
Q ss_pred Hhc
Q psy5819 293 SEV 295 (296)
Q Consensus 293 ~~A 295 (296)
.+|
T Consensus 94 ~~a 96 (151)
T 3gyz_A 94 AVA 96 (151)
T ss_dssp HHH
T ss_pred HHH
Confidence 876
No 23
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.71 E-value=1.4e-07 Score=74.12 Aligned_cols=84 Identities=13% Similarity=0.273 Sum_probs=73.9
Q ss_pred cccCCcEEEeeCCEEEEEEEeCCCC--CCcceEEeeccEEEEeecceEEeecccCCccc-CCc--eEEeeCCEEEEEEee
Q psy5819 3 IIVKESCWRQTPSKVFITVPLYNVP--THKVDVFTSESYIKLHYGNYIFEKLLLRPIVE-EAS--RIRLENNEAEFELIK 77 (296)
Q Consensus 3 ~~~~~y~W~QT~~~V~i~V~l~~~~--~~~~~V~~~~~~lkv~~~~~~~~~~L~~~Id~-e~S--~~~i~~~~v~i~L~K 77 (296)
++.|.|+-+|+++.|+|.|.+|.++ ...+++.+.++.+.+.++||++-+.|.++|.. +.+ +|.+..+.+.|+|.|
T Consensus 15 ~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~~PYyLRL~lP~~vved~~~~A~YD~d~g~~~v~lpK 94 (115)
T 3eud_A 15 MITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHLSPYYLRLRFPHELIDDERSTAQYDSKDECINVKVAK 94 (115)
T ss_dssp CBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEETTEEEEEECSSCEECSTTCEEEEETTTTEEEEEEEE
T ss_pred EeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEecCCeEEEEecCcceecCCCcceEEeCCCcEEEEEEcC
Confidence 5679999999999999999999776 77999999999999999999999999999944 443 566677999999999
Q ss_pred cCccc-cccc
Q psy5819 78 SEQAM-WDEK 86 (296)
Q Consensus 78 ~~~~~-W~~L 86 (296)
..+|. .+-|
T Consensus 95 ~~~GE~F~dL 104 (115)
T 3eud_A 95 LNKNEYFEDL 104 (115)
T ss_dssp SSTTCCCCCT
T ss_pred CcCCCcCCCc
Confidence 99996 7666
No 24
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.71 E-value=4.8e-08 Score=79.61 Aligned_cols=63 Identities=13% Similarity=0.138 Sum_probs=41.1
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+..+...|..++..|+|..|+..|.++|.++|.++.+|+++|.||+.+|+|.+|+..+.+|
T Consensus 43 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 105 (164)
T 3sz7_A 43 ANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKG 105 (164)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 345566666666666666666666666666666666666666666666666666666666554
No 25
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.71 E-value=6.8e-08 Score=73.04 Aligned_cols=64 Identities=14% Similarity=0.141 Sum_probs=59.9
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..++..+...|..++..|+|.+|+..|.++|+++|.++.+|+++|.||..+|++.+|+..+.+|
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 67 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQG 67 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3457889999999999999999999999999999999999999999999999999999998876
No 26
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.66 E-value=7.4e-08 Score=80.78 Aligned_cols=60 Identities=15% Similarity=0.075 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhh-------CCCChHHH----HHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 236 DWVKAKGDQMFRDGNYLGAVSAYSHGLQL-------CPNLACLY----SNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 236 ~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~-------~p~~~~ly----~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+.++|..+.+.|+|.+|+.+|++||++ +|+++.+| +|||.|+..+|+|.+|+.++.+|
T Consensus 58 ~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kA 128 (159)
T 2hr2_A 58 FCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKV 128 (159)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHH
Confidence 38899999999999999999999999999 99999999 99999999999999999999987
No 27
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.64 E-value=1.5e-07 Score=73.27 Aligned_cols=62 Identities=8% Similarity=0.018 Sum_probs=35.3
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|..|+..|.+++.++|.++.+++++|.||+.+|++.+|+..+.+|
T Consensus 42 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 103 (137)
T 3q49_B 42 VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRA 103 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 34555555555555555555555555555555555555555555555555555555555443
No 28
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.60 E-value=2.4e-07 Score=71.79 Aligned_cols=61 Identities=30% Similarity=0.434 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|+.+++.|+|..|+..|.++|.++|.++.+|+|+|.||+.+|+|.+|+.++.+|
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 64 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKA 64 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 6789999999999999999999999999999999999999999999999999999999876
No 29
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.56 E-value=2.2e-07 Score=75.42 Aligned_cols=62 Identities=19% Similarity=0.065 Sum_probs=59.0
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+.+.|..+++.|+|..|+..|.+||.++|.++.+|+++|.||+.+|+|.+|+.++.+|
T Consensus 62 ~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~a 123 (162)
T 3rkv_A 62 NIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLL 123 (162)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999876
No 30
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.54 E-value=2.6e-07 Score=75.89 Aligned_cols=62 Identities=18% Similarity=0.233 Sum_probs=58.4
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
++..+...|+.++..|+|.+|+..|.+||+++|+++.+|.++|.||..+|++.+|+..+..+
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~ 65 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKF 65 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999988765
No 31
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.54 E-value=2.6e-07 Score=82.83 Aligned_cols=62 Identities=24% Similarity=0.442 Sum_probs=46.5
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|+.++..|+|.+|+..|.+||.++|.++.+|+|+|.||+.+|+|.+|+.++.+|
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~a 64 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRA 64 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 35667777777777777777777777777777777777777777777777777777777765
No 32
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.53 E-value=3.6e-07 Score=74.12 Aligned_cols=64 Identities=17% Similarity=0.082 Sum_probs=58.2
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..++..+...|..++..|+|.+|+.+|.++|.++|+++.+|+|+|.||+.+|++.+|+..+.+|
T Consensus 52 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 115 (148)
T 2vgx_A 52 HYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAESGLFLA 115 (148)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4457888899999999999999999999999999999999999999999999999999988775
No 33
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.53 E-value=4e-07 Score=74.78 Aligned_cols=63 Identities=17% Similarity=0.060 Sum_probs=59.9
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+..+...|..++..|+|.+|+..|.++|+++|.++.+|.|+|.||.++|++.+|+..+.+|
T Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 167 (184)
T 3vtx_A 105 VYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKA 167 (184)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 456788999999999999999999999999999999999999999999999999999999886
No 34
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.52 E-value=4.5e-07 Score=72.32 Aligned_cols=64 Identities=22% Similarity=0.181 Sum_probs=58.9
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..++..+...|..++..|+|..|+.+|.++|.++|.++.+|+++|.||+.+|++.+|+..+.+|
T Consensus 49 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 112 (142)
T 2xcb_A 49 HYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSA 112 (142)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4457888899999999999999999999999999999999999999999999999999988775
No 35
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.50 E-value=3.1e-07 Score=74.54 Aligned_cols=63 Identities=13% Similarity=0.083 Sum_probs=59.6
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.++..+...|..++..|+|.+|+..|.+++.++|.++.+|+++|.||..+|+|.+|+..+.+|
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 81 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYG 81 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 346778899999999999999999999999999999999999999999999999999999876
No 36
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.50 E-value=3.2e-07 Score=74.45 Aligned_cols=62 Identities=10% Similarity=-0.186 Sum_probs=54.3
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..+++.|+|..|+..|.++|+++|+++.+|.++|.||..+|++.+|+..+.+|
T Consensus 30 ~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~a 91 (150)
T 4ga2_A 30 KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRS 91 (150)
T ss_dssp HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence 35566778999999999999999999999999999999999999999999999999888775
No 37
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.50 E-value=5.1e-07 Score=69.55 Aligned_cols=62 Identities=18% Similarity=0.190 Sum_probs=59.0
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|.+|+..|.++|.++|+++.+++++|.||..+|++.+|+..+.+|
T Consensus 26 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 87 (117)
T 3k9i_A 26 LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKI 87 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999988875
No 38
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.49 E-value=4.1e-07 Score=67.34 Aligned_cols=57 Identities=19% Similarity=0.137 Sum_probs=54.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCChH-HHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 239 KAKGDQMFRDGNYLGAVSAYSHGLQLCPNLAC-LYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 239 k~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~-ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+|..++..|+|..|+..|.+++..+|.++. +++++|.||+.+|++.+|+..+.+|
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a 61 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSA 61 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 56899999999999999999999999999999 9999999999999999999999876
No 39
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.49 E-value=2.4e-07 Score=89.18 Aligned_cols=62 Identities=27% Similarity=0.350 Sum_probs=58.8
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---------------hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL---------------ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~---------------~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..++.+|+.+|+.|+|..|+.+|.+||.++|.+ ..+|+|+|.||+++|+|.+|+.+|++|
T Consensus 267 ~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 343 (457)
T 1kt0_A 267 QAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKA 343 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 36688999999999999999999999999999998 799999999999999999999999987
No 40
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=98.48 E-value=1.4e-06 Score=67.30 Aligned_cols=77 Identities=9% Similarity=0.149 Sum_probs=68.6
Q ss_pred cCCcEEEeeCCEEEEEEEeCCCCCCcceEEeeccEEEEeec---------------ceEEeecccCCcccCCceEEeeCC
Q psy5819 5 VKESCWRQTPSKVFITVPLYNVPTHKVDVFTSESYIKLHYG---------------NYIFEKLLLRPIVEEASRIRLENN 69 (296)
Q Consensus 5 ~~~y~W~QT~~~V~i~V~l~~~~~~~~~V~~~~~~lkv~~~---------------~~~~~~~L~~~Id~e~S~~~i~~~ 69 (296)
.|.+.|.++++.+.|++.|||+...+++|.+.++.|.|+.. .|.-.+.|...|+++..++++.++
T Consensus 6 ~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~~G 85 (102)
T 4fei_A 6 TPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLAGG 85 (102)
T ss_dssp CCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEETT
T ss_pred cCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEECC
Confidence 57899999999999999999999999999999999999642 234477799999999999999999
Q ss_pred EEEEEEeecCcc
Q psy5819 70 EAEFELIKSEQA 81 (296)
Q Consensus 70 ~v~i~L~K~~~~ 81 (296)
.|.|+|.|+++.
T Consensus 86 vL~I~lpK~~~~ 97 (102)
T 4fei_A 86 VLTVRFEKLRPT 97 (102)
T ss_dssp EEEEEEEBSSCC
T ss_pred EEEEEEEccCcc
Confidence 999999998764
No 41
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.48 E-value=4.2e-07 Score=72.51 Aligned_cols=64 Identities=17% Similarity=0.104 Sum_probs=59.9
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...+..+...|..++..|+|.+|+..|.+++.++|.++.+|.++|.||..+|+|.+|+..+.+|
T Consensus 15 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 78 (142)
T 2xcb_A 15 EDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYG 78 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3356778899999999999999999999999999999999999999999999999999999876
No 42
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.46 E-value=7.9e-07 Score=72.24 Aligned_cols=64 Identities=30% Similarity=0.392 Sum_probs=60.8
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...+..+...|+.++..|+|..|+..|.++|.++|.++.+|+|+|.||+.+|+|.+|+.++.+|
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 71 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELA 71 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 3457889999999999999999999999999999999999999999999999999999999876
No 43
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.44 E-value=1.1e-06 Score=63.21 Aligned_cols=61 Identities=21% Similarity=0.318 Sum_probs=57.7
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+++.++|.++.++.++|.||+.+|++.+|+..+.+|
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 69 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKA 69 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 5678889999999999999999999999999999999999999999999999999988775
No 44
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.44 E-value=6.7e-07 Score=74.98 Aligned_cols=61 Identities=23% Similarity=0.275 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCh----------------HHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLA----------------CLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~----------------~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|+.++..|+|..|+..|.++|.+.|.++ .+|.|+|.||+.+|+|.+|+..|.+|
T Consensus 38 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 114 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKV 114 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 56789999999999999999999999999999887 89999999999999999999999876
No 45
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.42 E-value=1.1e-06 Score=67.00 Aligned_cols=63 Identities=10% Similarity=0.010 Sum_probs=59.6
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.++..+...|..++..|+|..|+..|.++|.++|.++.+|+++|.||..+|++.+|+..+.+|
T Consensus 17 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~a 79 (115)
T 2kat_A 17 DNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESG 79 (115)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 457889999999999999999999999999999999999999999999999999999998875
No 46
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=98.42 E-value=2.1e-06 Score=65.96 Aligned_cols=77 Identities=9% Similarity=0.058 Sum_probs=66.7
Q ss_pred ccCCcEEEeeCCEEEEEEEeCCCCCCcceEEeeccEEEEeec--------------------ceEEeecccCCcccCCce
Q psy5819 4 IVKESCWRQTPSKVFITVPLYNVPTHKVDVFTSESYIKLHYG--------------------NYIFEKLLLRPIVEEASR 63 (296)
Q Consensus 4 ~~~~y~W~QT~~~V~i~V~l~~~~~~~~~V~~~~~~lkv~~~--------------------~~~~~~~L~~~Id~e~S~ 63 (296)
..|.+.|.++++.+.|.+.|||+...+++|.+.++.|.|+.. .|.-.+.|...||++..+
T Consensus 3 ~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~ 82 (100)
T 3gla_A 3 WVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGIT 82 (100)
T ss_dssp SCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCE
T ss_pred ccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeE
Confidence 357899999999999999999999999999999999999852 123367799999999999
Q ss_pred EEeeCCEEEEEEeecCc
Q psy5819 64 IRLENNEAEFELIKSEQ 80 (296)
Q Consensus 64 ~~i~~~~v~i~L~K~~~ 80 (296)
+++.+|.|.|+|.|+..
T Consensus 83 A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 83 AAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp EEEETTEEEEEEEBC--
T ss_pred EEEeCCEEEEEEecCCC
Confidence 99999999999999864
No 47
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.40 E-value=1.2e-06 Score=65.22 Aligned_cols=64 Identities=23% Similarity=0.223 Sum_probs=51.4
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...+..+...|..++..|+|..|+..|.+++..+|.++.++.++|.|+..+|++.+|+..+.++
T Consensus 35 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 98 (118)
T 1elw_A 35 PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEG 98 (118)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3456777788888888888888888888888888888888888888888888888888777654
No 48
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.40 E-value=1.4e-06 Score=68.03 Aligned_cols=61 Identities=16% Similarity=0.068 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+++.++|.++.+++++|.||+.+|++.+|+..+.++
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 125 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRC 125 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 5677788888888888888888888888888888888888888888888888888887765
No 49
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.38 E-value=8.5e-07 Score=81.71 Aligned_cols=61 Identities=23% Similarity=0.339 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---------------hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL---------------ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~---------------~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|+.+|+.|+|..|+.+|.+||.++|.+ +.+|+|+|.||+++|+|.+|+..|.+|
T Consensus 147 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 222 (336)
T 1p5q_A 147 STIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKA 222 (336)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 6778999999999999999999999999999998 699999999999999999999999986
No 50
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.37 E-value=1.1e-06 Score=68.68 Aligned_cols=65 Identities=17% Similarity=0.084 Sum_probs=60.0
Q ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 231 EENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...++..+...|..++..|++..|+.+|.+||.++|.++.++.++|.||..+|++.+|+..+.++
T Consensus 47 ~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~~~~A~~~~~~a 111 (121)
T 1hxi_A 47 EPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAW 111 (121)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34467889999999999999999999999999999999999999999999999999999988775
No 51
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.37 E-value=1.3e-06 Score=74.23 Aligned_cols=61 Identities=18% Similarity=0.077 Sum_probs=35.3
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+++.++|.++.+|.++|.||..+|++.+|+..+.+|
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 102 (228)
T 4i17_A 42 SVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEG 102 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 3444445555666666666666666666666655556666666666666666665555543
No 52
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.37 E-value=2.1e-06 Score=66.65 Aligned_cols=64 Identities=23% Similarity=0.425 Sum_probs=60.8
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...+..+...|..++..|+|..|+..|.++|.++|.++.+|+++|.||+.+|+|.+|+..+.+|
T Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 69 (137)
T 3q49_B 6 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRA 69 (137)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 4468899999999999999999999999999999999999999999999999999999999876
No 53
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.35 E-value=1.1e-06 Score=65.06 Aligned_cols=64 Identities=14% Similarity=0.180 Sum_probs=52.6
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--ChHHHHHHHHHHHHc-CCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPN--LACLYSNRAAAHLAL-NNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~--~~~ly~NRA~~~lkl-~~~~~Ai~D~~~A 295 (296)
...+..+...|..++..|+|..|+..|.+++.++|. +..++.++|.||..+ |++.+|+..+..+
T Consensus 37 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~ 103 (112)
T 2kck_A 37 PEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYIEGKEVEAEIAEARA 103 (112)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 345667778888888888888888888888888888 888888888888888 8888888877664
No 54
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.35 E-value=1.3e-06 Score=66.78 Aligned_cols=65 Identities=18% Similarity=0.188 Sum_probs=58.7
Q ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 231 EENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
....+..+...|..++..|+|..|+..|.+++.++|.++.++.++|.||+.+|++.+|+..+.++
T Consensus 46 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 110 (133)
T 2lni_A 46 NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKA 110 (133)
T ss_dssp CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 34467888999999999999999999999999999999999999999999999999999988765
No 55
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.35 E-value=1.7e-06 Score=67.63 Aligned_cols=59 Identities=14% Similarity=0.014 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 237 WVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 237 ~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+...|..+++.|+|.+|+..|.++|.++|.++.+|+++|.|+..+|++.+|+..+.+|
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 77 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHA 77 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999876
No 56
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.33 E-value=2.4e-06 Score=64.80 Aligned_cols=61 Identities=16% Similarity=0.234 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+++..+|.++.++.++|.||+.+|+|.+|+..+.++
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 64 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKA 64 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 5678899999999999999999999999999999999999999999999999999998875
No 57
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.31 E-value=1.5e-06 Score=68.49 Aligned_cols=64 Identities=17% Similarity=0.153 Sum_probs=58.0
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-------hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL-------ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~-------~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+..+...|..++..|+|..|+..|.+||+++|.+ +.+|.|+|.||..+|+|.+|+..+.+|
T Consensus 39 p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~ka 109 (127)
T 4gcn_A 39 PSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRS 109 (127)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3457889999999999999999999999999998865 368999999999999999999998876
No 58
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.28 E-value=3.4e-06 Score=67.12 Aligned_cols=64 Identities=22% Similarity=0.248 Sum_probs=50.8
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...+..+...|..++..|+|..|+..|.+++.++|.++.+++++|.||..+|++.+|+..+.+|
T Consensus 44 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 107 (166)
T 1a17_A 44 PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETV 107 (166)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 3456777778888888888888888888888888888888888888888888888888777664
No 59
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=98.27 E-value=5.2e-06 Score=66.25 Aligned_cols=77 Identities=9% Similarity=-0.009 Sum_probs=67.9
Q ss_pred cCCcEEEeeCCEEEEEEEeCCCCCCcceEEeec-cEEEEeec----------------ceEEeecccCCcccCCc-eEEe
Q psy5819 5 VKESCWRQTPSKVFITVPLYNVPTHKVDVFTSE-SYIKLHYG----------------NYIFEKLLLRPIVEEAS-RIRL 66 (296)
Q Consensus 5 ~~~y~W~QT~~~V~i~V~l~~~~~~~~~V~~~~-~~lkv~~~----------------~~~~~~~L~~~Id~e~S-~~~i 66 (296)
.|.+.|.++++.+.|.+.|||+...+++|.+.+ +.|.|+.. .|.-.+.|...|+++.. ++++
T Consensus 24 ~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~ 103 (123)
T 3aab_A 24 YPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKY 103 (123)
T ss_dssp CSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECTTCCCEEEE
T ss_pred CCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCcchhCeeEE
Confidence 478999999999999999999999999999999 99999874 23336779999999999 9999
Q ss_pred eCCEEEEEEeecCcc
Q psy5819 67 ENNEAEFELIKSEQA 81 (296)
Q Consensus 67 ~~~~v~i~L~K~~~~ 81 (296)
.+|.|.|+|.|....
T Consensus 104 ~~GvL~I~lPK~~~~ 118 (123)
T 3aab_A 104 ENGVLTIRIPIAGTS 118 (123)
T ss_dssp ETTEEEEEEEGGGEE
T ss_pred cCCEEEEEEEcCCCC
Confidence 999999999998653
No 60
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.26 E-value=1e-06 Score=82.74 Aligned_cols=62 Identities=26% Similarity=0.343 Sum_probs=57.9
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHh----------------hCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQ----------------LCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~----------------~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..++..|+.+|+.|+|..|+.+|.+||+ ++|.++.+|+|+|.||+++|+|.+|+.+|.+|
T Consensus 222 ~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 299 (370)
T 1ihg_A 222 ISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEA 299 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 356799999999999999999999999998 77888899999999999999999999999887
No 61
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.25 E-value=3.9e-06 Score=70.15 Aligned_cols=62 Identities=18% Similarity=0.114 Sum_probs=59.5
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|..|+..|.+++.++|.++.+|+|+|.||+.+|+|.+|+..+.+|
T Consensus 36 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a 97 (213)
T 1hh8_A 36 HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEA 97 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999876
No 62
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.23 E-value=6e-06 Score=63.31 Aligned_cols=61 Identities=13% Similarity=0.114 Sum_probs=56.9
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL---ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~---~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+++..+|++ +.+++++|.||..+|++.+|+..+.++
T Consensus 39 ~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 102 (129)
T 2xev_A 39 PNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQV 102 (129)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3678889999999999999999999999999998 889999999999999999999988765
No 63
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.22 E-value=7.4e-06 Score=60.78 Aligned_cols=62 Identities=32% Similarity=0.459 Sum_probs=58.6
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|..|+..|.+++..+|.++.++.++|.||+.+|++.+|+..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 64 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKT 64 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 35778999999999999999999999999999999999999999999999999999998875
No 64
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.22 E-value=4.2e-06 Score=71.15 Aligned_cols=56 Identities=18% Similarity=0.086 Sum_probs=53.4
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 240 AKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 240 ~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..|..++..|+|..|+..|.++|+++|+++.+++++|.||+.+|++.+|+..+.+|
T Consensus 59 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 114 (208)
T 3urz_A 59 ELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKI 114 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999999876
No 65
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.22 E-value=1.3e-05 Score=61.12 Aligned_cols=65 Identities=34% Similarity=0.487 Sum_probs=60.9
Q ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 231 EENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
....+..+...|..++..|+|..|+..|.+++..+|.++.++.++|.||+.+|++.+|+..+.+|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 76 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEEC 76 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 34567889999999999999999999999999999999999999999999999999999998875
No 66
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.22 E-value=6.7e-06 Score=62.06 Aligned_cols=64 Identities=22% Similarity=0.251 Sum_probs=53.4
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...+..+...|..++..|+|..|+..|.+++..+|.++.++.++|.+|..+|++.+|+..+.+|
T Consensus 43 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~ 106 (131)
T 2vyi_A 43 PANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKA 106 (131)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 3456777888888888888888888888888888888888888888888888888888887765
No 67
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.21 E-value=2.5e-06 Score=72.53 Aligned_cols=62 Identities=23% Similarity=0.073 Sum_probs=58.8
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHH----------------HHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSN----------------RAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~N----------------RA~~~lkl~~~~~Ai~D~~~A 295 (296)
++..+..+|..++..|+|.+|+..|.++|.++|+++.+|++ +|.||..+|++.+|+..+.+|
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 80 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKEL 80 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999 999999999999999999876
No 68
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.20 E-value=4.5e-06 Score=71.44 Aligned_cols=62 Identities=18% Similarity=0.205 Sum_probs=58.3
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
++..+...|..++..|+|.+|+..|.++|.++|.++.+++++|.+++.+|++.+|+..+.+|
T Consensus 4 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 65 (217)
T 2pl2_A 4 AEQNPLRLGVQLYALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTL 65 (217)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999998875
No 69
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.20 E-value=7.1e-07 Score=82.41 Aligned_cols=61 Identities=20% Similarity=0.249 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCh-----------------HHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLA-----------------CLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~-----------------~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..++..|+.+|+.|+|..|+.+|.+||.++|.+. .+|+|+|.||+++|+|.+|+.+|.+|
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~a 256 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIV 256 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 67789999999999999999999999999999876 49999999999999999999999986
No 70
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.20 E-value=3.8e-06 Score=80.72 Aligned_cols=61 Identities=20% Similarity=0.109 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+.+.|..+++.|+|..|+.+|++||.++|.++.+|+|||.||+.+|+|.+|+.++.+|
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~a 377 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKV 377 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 5678899999999999999999999999999999999999999999999999999999886
No 71
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.19 E-value=5.4e-06 Score=61.10 Aligned_cols=61 Identities=23% Similarity=0.335 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+++.++|.+..++.++|.+|+.+|++.+|+..+.+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 66 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYV 66 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 4567789999999999999999999999999999999999999999999999999998875
No 72
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.19 E-value=4.2e-06 Score=64.22 Aligned_cols=59 Identities=17% Similarity=0.111 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCh---HHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 237 WVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLA---CLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 237 ~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~---~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+...|..++..|+|..|+..|.+++..+|.++ .+++++|.||+.+|+|.+|+..+.++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~ 65 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDL 65 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 467889999999999999999999999999988 79999999999999999999998765
No 73
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.18 E-value=3.5e-06 Score=68.18 Aligned_cols=65 Identities=17% Similarity=0.062 Sum_probs=58.7
Q ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHH-Hhc
Q psy5819 231 EENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDA-SEV 295 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~-~~A 295 (296)
.+.++..+...|..++..|+|..|+.+|.++|+++|+++.+|.|+|.+|+.+|++.+|+..+ .+|
T Consensus 61 ~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~a 126 (150)
T 4ga2_A 61 QERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERA 126 (150)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 34568899999999999999999999999999999999999999999999999998877664 554
No 74
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.18 E-value=4.9e-06 Score=76.54 Aligned_cols=61 Identities=23% Similarity=0.171 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+.+.|..+++.|+|..|+.+|.+||.++|.++.+|+|+|.||+.+|+|.+|+.++.+|
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 256 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKV 256 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 4678899999999999999999999999999999999999999999999999999999876
No 75
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.17 E-value=2.1e-06 Score=71.76 Aligned_cols=65 Identities=12% Similarity=0.112 Sum_probs=59.1
Q ss_pred CCCChHHHHHHHHHHHHcCCH----------HHHHHHHHHHHhhCCCChHHHHHHHHHHHHcC-----------CHHHHH
Q psy5819 231 EENNPDWVKAKGDQMFRDGNY----------LGAVSAYSHGLQLCPNLACLYSNRAAAHLALN-----------NLHKAV 289 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g~y----------~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~-----------~~~~Ai 289 (296)
...+++.+...|+.+...|+| .+||.+|.+||+++|+++.+|+|++.+|..+| +|.+|+
T Consensus 32 ~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~ 111 (158)
T 1zu2_A 32 NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLAT 111 (158)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHH
Confidence 455689999999999988875 59999999999999999999999999999985 899999
Q ss_pred HHHHhc
Q psy5819 290 DDASEV 295 (296)
Q Consensus 290 ~D~~~A 295 (296)
..|.+|
T Consensus 112 ~~~~kA 117 (158)
T 1zu2_A 112 QFFQQA 117 (158)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999887
No 76
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.13 E-value=1.3e-05 Score=63.67 Aligned_cols=61 Identities=28% Similarity=0.446 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+++.++|.++.++.++|.||+.+|+|.+|+..+.+|
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 73 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRA 73 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4556666666666666666666666666666666666666666666666666666666544
No 77
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.13 E-value=8.8e-06 Score=68.01 Aligned_cols=60 Identities=13% Similarity=0.070 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 236 DWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 236 ~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+...|..++..|+|..|+..|.++|.++|.++.+|+++|.||+.+|+|.+|+..+.+|
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~a 148 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKA 148 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 678889999999999999999999999999999999999999999999999999998876
No 78
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.12 E-value=9.5e-06 Score=70.57 Aligned_cols=65 Identities=12% Similarity=0.087 Sum_probs=60.6
Q ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 231 EENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL---ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~---~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
....+..+...|..++..|+|..|+..|.++|...|.+ +.+++++|.||+.+|+|.+|+..+.++
T Consensus 11 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~ 78 (261)
T 3qky_A 11 RHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERF 78 (261)
T ss_dssp CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 34568899999999999999999999999999999998 899999999999999999999998875
No 79
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.12 E-value=1.8e-05 Score=59.68 Aligned_cols=62 Identities=31% Similarity=0.468 Sum_probs=55.3
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|..|+..|.+++..+|.++.++.++|.||+.+|++.+|+..+.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 72 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERA 72 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHH
Confidence 46678888999999999999999999999999999999999999999999999999888765
No 80
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.10 E-value=1.4e-05 Score=62.22 Aligned_cols=64 Identities=36% Similarity=0.584 Sum_probs=60.0
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL---ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~---~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...+..+...|..++..|+|..|+..|.+++.++|.+ ..+|.++|.||+.+|+|.+|+..|.++
T Consensus 25 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 91 (148)
T 2dba_A 25 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91 (148)
T ss_dssp CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 4567889999999999999999999999999999987 899999999999999999999999875
No 81
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.08 E-value=9.5e-06 Score=76.05 Aligned_cols=62 Identities=19% Similarity=0.244 Sum_probs=58.9
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+.+.|..+++.|+|.+|+.+|.+||+++|.++.+|+++|.||+.+|+|.+|+.++.+|
T Consensus 272 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~A 333 (370)
T 1ihg_A 272 ALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKA 333 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999999876
No 82
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.07 E-value=6e-06 Score=76.12 Aligned_cols=60 Identities=15% Similarity=0.055 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhcC
Q psy5819 237 WVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEVR 296 (296)
Q Consensus 237 ~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A~ 296 (296)
.+.+.|..+++.|+|..|+..|.+||.++|.++.+|+|+|.||+.+|+|.+|+.++.+|.
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al 291 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQ 291 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 677899999999999999999999999999999999999999999999999999999874
No 83
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.05 E-value=9.5e-06 Score=82.93 Aligned_cols=66 Identities=14% Similarity=0.179 Sum_probs=56.7
Q ss_pred cCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 230 PEENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 230 ~~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.....+..+.+.|+.+++.|+|.+|+.+|.+||+++|+++.+|+|+|.+|..+|++.+|+..+.+|
T Consensus 38 l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kA 103 (723)
T 4gyw_A 38 VFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRA 103 (723)
T ss_dssp HCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 345567888888999999999999999999999999998999999999999999999998888876
No 84
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.03 E-value=8.3e-06 Score=77.01 Aligned_cols=65 Identities=6% Similarity=-0.033 Sum_probs=54.0
Q ss_pred CCCChHHHHHHHHHHHHcCC-HHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 231 EENNPDWVKAKGDQMFRDGN-YLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g~-y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
....+..+..+|..++..|+ |.+|+.+|.+||.++|+++.+|+||+.|+..+|+|.+|+.+|.+|
T Consensus 127 ~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~ka 192 (382)
T 2h6f_A 127 NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADI 192 (382)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 34557778888888888886 888888888888888888888888888888888888888888775
No 85
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.03 E-value=5.6e-06 Score=78.55 Aligned_cols=61 Identities=25% Similarity=0.443 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|+.+++.|+|..|+..|.++|..+|.++.+|+++|.||+.+|++.+|+..|.+|
T Consensus 25 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~a 85 (537)
T 3fp2_A 25 AVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKA 85 (537)
T ss_dssp HHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4455556666666666666666666666666666666666666666666666666555543
No 86
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.03 E-value=1.5e-05 Score=71.23 Aligned_cols=64 Identities=8% Similarity=-0.001 Sum_probs=60.4
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...+..+...|..+++.|+|.+|+..|.+||.++|.++.+|+++|.+|..+|+|.+|+..+.+|
T Consensus 35 p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 98 (281)
T 2c2l_A 35 PLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRA 98 (281)
T ss_dssp SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3457889999999999999999999999999999999999999999999999999999998876
No 87
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.03 E-value=1.1e-05 Score=68.86 Aligned_cols=65 Identities=15% Similarity=0.086 Sum_probs=61.3
Q ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHc-----------CCHHHHHHHHHhc
Q psy5819 231 EENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLAL-----------NNLHKAVDDASEV 295 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl-----------~~~~~Ai~D~~~A 295 (296)
.+.++..+...|..++..|+|.+|+..|.++|.++|+++.++.|+|.++..+ |++.+|+..+.+|
T Consensus 35 ~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a 110 (217)
T 2pl2_A 35 NPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDA 110 (217)
T ss_dssp SSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHH
Confidence 4556889999999999999999999999999999999999999999999999 9999999998876
No 88
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.02 E-value=1.3e-05 Score=75.24 Aligned_cols=61 Identities=21% Similarity=0.249 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.++++++|.++.+|.++|.||..+|++.+|+..+.++
T Consensus 39 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 99 (514)
T 2gw1_A 39 PVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANEGLGKFADAMFDLSVL 99 (514)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4555556666666666666666666666666666666666666666666666666555543
No 89
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.02 E-value=1.8e-05 Score=67.19 Aligned_cols=63 Identities=21% Similarity=0.244 Sum_probs=59.5
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC-CChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCP-NLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p-~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+|..+...|..++..|+|..|+..|.++|.++| .+..+++++|.||+.+|+|.+|+..+.+|
T Consensus 5 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 68 (228)
T 4i17_A 5 TDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIA 68 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHH
Confidence 3478899999999999999999999999999999 89999999999999999999999999876
No 90
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.01 E-value=4.9e-06 Score=78.59 Aligned_cols=65 Identities=5% Similarity=-0.106 Sum_probs=58.8
Q ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 231 EENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...++..+..+|..++..|+|.+|+.+|.+||.++|.++.+|+||+.|+..+|++.+|+..+++|
T Consensus 162 ~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~a 226 (382)
T 2h6f_A 162 QPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQL 226 (382)
T ss_dssp CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 44567889999999999999999999999999999999999999999999999999999998876
No 91
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.00 E-value=1.5e-05 Score=60.25 Aligned_cols=62 Identities=11% Similarity=0.188 Sum_probs=57.8
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-------hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL-------ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~-------~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|..|+..|.+++.+.|.+ +.+|+++|.+|..+|++.+|+..+.++
T Consensus 37 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 105 (131)
T 1elr_A 37 NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKS 105 (131)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 46788999999999999999999999999998877 899999999999999999999998775
No 92
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=98.00 E-value=2.9e-05 Score=64.80 Aligned_cols=74 Identities=14% Similarity=0.073 Sum_probs=65.1
Q ss_pred cEEEeeCCEEEEEEEeCCCCCCcceEEeeccEEEEeec---------------------ceEEeecccCCcccCCceEEe
Q psy5819 8 SCWRQTPSKVFITVPLYNVPTHKVDVFTSESYIKLHYG---------------------NYIFEKLLLRPIVEEASRIRL 66 (296)
Q Consensus 8 y~W~QT~~~V~i~V~l~~~~~~~~~V~~~~~~lkv~~~---------------------~~~~~~~L~~~Id~e~S~~~i 66 (296)
+++.+|++.+.|.+.|||+...+++|.+.++.|.|+.. .|.-.+.|...||++..++++
T Consensus 59 vdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~ 138 (161)
T 4eld_A 59 ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKF 138 (161)
T ss_dssp EEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEE
T ss_pred eeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEE
Confidence 89999999999999999999999999999999999652 122356799999999999999
Q ss_pred eCCEEEEEEeecCcc
Q psy5819 67 ENNEAEFELIKSEQA 81 (296)
Q Consensus 67 ~~~~v~i~L~K~~~~ 81 (296)
.+|.|.|+|.|++..
T Consensus 139 ~nGvL~I~lpK~~~~ 153 (161)
T 4eld_A 139 ENGVLSVILPKAESS 153 (161)
T ss_dssp ETTEEEEEEEBCGGG
T ss_pred ECCEEEEEEEcCCCC
Confidence 999999999998653
No 93
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.99 E-value=3.5e-05 Score=57.44 Aligned_cols=63 Identities=24% Similarity=0.348 Sum_probs=53.6
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+..+...|..++..|+|..|+..|.+++..+|.++.++.+.|.+|..+|++.+|+..+.++
T Consensus 41 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 103 (125)
T 1na0_A 41 NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKA 103 (125)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 456677788888888899999999999999888888888888999999999999988887764
No 94
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=97.99 E-value=1.8e-05 Score=70.20 Aligned_cols=62 Identities=18% Similarity=0.125 Sum_probs=37.9
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|..|+..|.+++.++|.+..+|.++|.||..+|++.+|+..+.++
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~ 97 (359)
T 3ieg_A 36 NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQGKLDEAEDDFKKV 97 (359)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 45555566666666666666666666666666666666666666666666666666655543
No 95
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.99 E-value=2.7e-05 Score=64.87 Aligned_cols=63 Identities=13% Similarity=-0.011 Sum_probs=58.5
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCh----------------HHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLA----------------CLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~----------------~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+..+...|..++..|+|..|+..|.+++.+.|.+. .+++|+|.||+.+|++.+|+..+.+|
T Consensus 69 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 147 (213)
T 1hh8_A 69 HLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALA 147 (213)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 4578899999999999999999999999999888766 99999999999999999999998875
No 96
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.99 E-value=1.8e-05 Score=80.90 Aligned_cols=66 Identities=21% Similarity=0.251 Sum_probs=60.4
Q ss_pred cCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 230 PEENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 230 ~~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
-....+..+.+.|+.++..|+|.+|+.+|.+||+++|+++.+|+|+|.+|..+|++.+|+..+.+|
T Consensus 72 l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~A 137 (723)
T 4gyw_A 72 ISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTA 137 (723)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 345668889999999999999999999999999999999999999999999999999999999876
No 97
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=97.99 E-value=3.8e-05 Score=63.55 Aligned_cols=76 Identities=20% Similarity=0.215 Sum_probs=65.9
Q ss_pred cCCcEEEeeCCEEEEEEEeCCCCCCcceEEe-eccEEEEeec--------------------ceEEeecccCCcccCCce
Q psy5819 5 VKESCWRQTPSKVFITVPLYNVPTHKVDVFT-SESYIKLHYG--------------------NYIFEKLLLRPIVEEASR 63 (296)
Q Consensus 5 ~~~y~W~QT~~~V~i~V~l~~~~~~~~~V~~-~~~~lkv~~~--------------------~~~~~~~L~~~Id~e~S~ 63 (296)
.|.+.|.++++.+.|.+.|||+...+++|.+ .++.|.|+.. .|.-.+.|...|+++..+
T Consensus 43 ~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~ 122 (151)
T 1gme_A 43 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVK 122 (151)
T ss_dssp GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCE
T ss_pred CCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceE
Confidence 4789999999999999999999999999999 4678888752 123366799999999999
Q ss_pred EEeeCCEEEEEEeecCc
Q psy5819 64 IRLENNEAEFELIKSEQ 80 (296)
Q Consensus 64 ~~i~~~~v~i~L~K~~~ 80 (296)
+++.+|.|.|+|.|..+
T Consensus 123 A~~~nGvL~I~lPK~~~ 139 (151)
T 1gme_A 123 AGLENGVLTVTVPKAEV 139 (151)
T ss_dssp EEEETTEEEEEEECCCC
T ss_pred EEEECCEEEEEEEccCc
Confidence 99999999999999865
No 98
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.97 E-value=1e-05 Score=69.77 Aligned_cols=56 Identities=21% Similarity=0.261 Sum_probs=26.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHH
Q psy5819 238 VKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDAS 293 (296)
Q Consensus 238 lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~ 293 (296)
+...|..++..|+|..|+..|.++++.+|.++.++.++|.||+.+|+|.+|+..+.
T Consensus 6 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~ 61 (272)
T 3u4t_A 6 EFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIE 61 (272)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34444444444444444444444444444444444444444444444444444443
No 99
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.95 E-value=2.7e-05 Score=66.62 Aligned_cols=62 Identities=18% Similarity=0.105 Sum_probs=56.1
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCh---HHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLA---CLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~---~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|..|+..|.+++...|.++ .+++++|.||+++|+|.+|+..+.++
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~ 67 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRF 67 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 367788999999999999999999999999998764 78999999999999999999998765
No 100
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.95 E-value=6e-05 Score=56.16 Aligned_cols=61 Identities=21% Similarity=0.318 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+++..+|.+..++.++|.+|..+|++.+|+..+.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 69 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKA 69 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 5678889999999999999999999999999999999999999999999999999888765
No 101
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=97.94 E-value=3.1e-05 Score=65.59 Aligned_cols=60 Identities=22% Similarity=0.362 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+++..+ .++.+|.++|.||+.+|++.+|+..+.+|
T Consensus 5 a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 64 (258)
T 3uq3_A 5 ADKEKAEGNKFYKARQFDEAIEHYNKAWELH-KDITYLNNRAAAEYEKGEYETAISTLNDA 64 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-CCTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 6789999999999999999999999999999 99999999999999999999999998875
No 102
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=97.91 E-value=4.1e-05 Score=64.81 Aligned_cols=59 Identities=31% Similarity=0.446 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHh
Q psy5819 236 DWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASE 294 (296)
Q Consensus 236 ~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~ 294 (296)
..+...|..++..|+|..|+..|.+++.++|.++.+|.++|.||+.+|++.+|+..+.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 198 (258)
T 3uq3_A 140 EEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNK 198 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 34444455555555555555555555555555555555555555555555555544443
No 103
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=97.90 E-value=9.2e-05 Score=57.52 Aligned_cols=72 Identities=15% Similarity=0.137 Sum_probs=63.4
Q ss_pred EEEeeCCEEEEEEEeCCCCCCcceEEeeccEEEEeec--------c-----eEEeecccCCcccCCceEEe-eCCEEEEE
Q psy5819 9 CWRQTPSKVFITVPLYNVPTHKVDVFTSESYIKLHYG--------N-----YIFEKLLLRPIVEEASRIRL-ENNEAEFE 74 (296)
Q Consensus 9 ~W~QT~~~V~i~V~l~~~~~~~~~V~~~~~~lkv~~~--------~-----~~~~~~L~~~Id~e~S~~~i-~~~~v~i~ 74 (296)
.+.++++.+.|.+.|||+.+.+++|.+.++.|.|+.. . |.-.+.|...||++.-++++ .+|.|.|+
T Consensus 6 ~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL~I~ 85 (106)
T 3l1e_A 6 EVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTFS 85 (106)
T ss_dssp EEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEEEEE
T ss_pred EEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEE
Confidence 5789999999999999999999999999999999862 1 22266799999999999999 79999999
Q ss_pred EeecCc
Q psy5819 75 LIKSEQ 80 (296)
Q Consensus 75 L~K~~~ 80 (296)
|.|..+
T Consensus 86 ~PK~~~ 91 (106)
T 3l1e_A 86 GPKIPS 91 (106)
T ss_dssp EEBCCC
T ss_pred EEccCc
Confidence 999875
No 104
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=97.88 E-value=5e-05 Score=58.51 Aligned_cols=74 Identities=8% Similarity=0.050 Sum_probs=64.3
Q ss_pred cEEEeeCCEEEEEEEeCCCCCCcceEEeeccEEEEeec--------c-----eEEeecccCCcccCCceEEe-eCCEEEE
Q psy5819 8 SCWRQTPSKVFITVPLYNVPTHKVDVFTSESYIKLHYG--------N-----YIFEKLLLRPIVEEASRIRL-ENNEAEF 73 (296)
Q Consensus 8 y~W~QT~~~V~i~V~l~~~~~~~~~V~~~~~~lkv~~~--------~-----~~~~~~L~~~Id~e~S~~~i-~~~~v~i 73 (296)
.+|.++++.+.|.+.|||+.+.+++|.+.++.|.|+.. . |.-.+.|...||++..++++ .+|.|.|
T Consensus 4 vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~I 83 (101)
T 2wj5_A 4 AQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLSI 83 (101)
T ss_dssp CCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEEE
T ss_pred EEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEEEE
Confidence 56889999999999999999999999999999998762 1 23366799999999999999 7999999
Q ss_pred EEeecCcc
Q psy5819 74 ELIKSEQA 81 (296)
Q Consensus 74 ~L~K~~~~ 81 (296)
+|.|..+.
T Consensus 84 ~lPK~~~~ 91 (101)
T 2wj5_A 84 QATPASAQ 91 (101)
T ss_dssp EECBCCCC
T ss_pred EEECCCcC
Confidence 99998643
No 105
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.86 E-value=5.5e-05 Score=65.07 Aligned_cols=63 Identities=11% Similarity=0.095 Sum_probs=57.1
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhcC
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEVR 296 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A~ 296 (296)
.+..+...|..++..|+|..|+..|.+++.++|.++.++.++|.||+.+|++.+|+..+.+|.
T Consensus 73 ~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al 135 (272)
T 3u4t_A 73 KSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQI 135 (272)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHh
Confidence 356688999999999999999999999999999999999999999999999999999988763
No 106
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.86 E-value=4.2e-05 Score=73.95 Aligned_cols=63 Identities=22% Similarity=0.254 Sum_probs=60.0
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+..+...|..+++.|+|.+|+..|.+||+++|.++.+|+|+|.+|+.+|+|.+|+..+.+|
T Consensus 38 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~a 100 (477)
T 1wao_1 38 SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETV 100 (477)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 347889999999999999999999999999999999999999999999999999999999876
No 107
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.86 E-value=6.3e-05 Score=64.54 Aligned_cols=62 Identities=24% Similarity=0.194 Sum_probs=50.0
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|..|+..|.+++.++|.++.++.++|.||+.+|++.+|+..+.++
T Consensus 76 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 137 (275)
T 1xnf_A 76 MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAF 137 (275)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 46677778888888888888888888888888888888888888888888888888777654
No 108
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.86 E-value=4.4e-05 Score=62.15 Aligned_cols=62 Identities=15% Similarity=0.084 Sum_probs=38.3
Q ss_pred ChHHHHHHHHH-HHHcCCH--HHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQ-MFRDGNY--LGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~-~fk~g~y--~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
++..+...|.. ++..|+| ..|+..|.+++.++|.++.++.++|.+|+.+|++.+|+..+.+|
T Consensus 77 ~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~a 141 (177)
T 2e2e_A 77 NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKV 141 (177)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 34555566666 5566666 66666666666666666666666666666666666666655543
No 109
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.86 E-value=5.5e-06 Score=61.67 Aligned_cols=61 Identities=20% Similarity=0.233 Sum_probs=55.3
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------hHHHHHHHHHHHHcCCHHHHHHHHH
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL------ACLYSNRAAAHLALNNLHKAVDDAS 293 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~------~~ly~NRA~~~lkl~~~~~Ai~D~~ 293 (296)
..+..+...|..++..|+|.+|+..|.++|.++|.+ ..++++++.|+..+|++..|+.++.
T Consensus 36 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 36 QNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSS
T ss_pred CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHH
Confidence 357889999999999999999999999999999998 8999999999999999887776544
No 110
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.85 E-value=1.2e-05 Score=66.13 Aligned_cols=60 Identities=8% Similarity=0.047 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 236 DWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 236 ~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+...|..++..|+|.+|+..|.+++..+|+++.++.++|.+|+.+|++.+|+..+.++
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a 66 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATI 66 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHh
Confidence 347889999999999999999999999999999999999999999999999999988775
No 111
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.84 E-value=6.2e-05 Score=64.59 Aligned_cols=63 Identities=14% Similarity=0.143 Sum_probs=59.6
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+..+...|..++..|+|..|+..|.+++.++|.++.+|.++|.+|..+|++.+|+..+.+|
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 103 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSV 103 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 357889999999999999999999999999999999999999999999999999999998876
No 112
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.81 E-value=4.3e-05 Score=70.81 Aligned_cols=63 Identities=19% Similarity=0.150 Sum_probs=48.3
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+..+...|..++..|+|..|+..|.++++++|.++.++.++|.||..+|++.+|+..+.++
T Consensus 58 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 120 (450)
T 2y4t_A 58 DNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKV 120 (450)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 446677777777777888888888888888777777777777888888888888877777654
No 113
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.80 E-value=5.7e-06 Score=80.10 Aligned_cols=61 Identities=28% Similarity=0.446 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|+.++..|+|.+|+..|.+||+++|.++.+|+|+|.||+.+|+|.+|+.++.+|
T Consensus 6 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 66 (477)
T 1wao_1 6 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRA 66 (477)
T ss_dssp HTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3445677888999999999999999999999999999999999999999999999999886
No 114
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.79 E-value=8.2e-05 Score=60.49 Aligned_cols=63 Identities=19% Similarity=0.210 Sum_probs=58.9
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHH-HHHcCCH--HHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAA-HLALNNL--HKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~-~lkl~~~--~~Ai~D~~~A 295 (296)
..+..+...|..++..|+|..|+..|.+++.++|.++.++.++|.| |+..|++ .+|+..+.++
T Consensus 42 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~a 107 (177)
T 2e2e_A 42 QNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKA 107 (177)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHH
Confidence 4578899999999999999999999999999999999999999999 8899999 9999988765
No 115
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.77 E-value=4.7e-05 Score=76.74 Aligned_cols=65 Identities=15% Similarity=0.016 Sum_probs=60.9
Q ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 231 EENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...++..+...|..++..|+|.+|+..|.++|+++|+++.+|+|+|.+|+.+|+|.+|+.++.+|
T Consensus 429 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 493 (681)
T 2pzi_A 429 FSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEV 493 (681)
T ss_dssp CTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34567889999999999999999999999999999999999999999999999999999999886
No 116
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.77 E-value=0.00011 Score=55.88 Aligned_cols=62 Identities=11% Similarity=0.086 Sum_probs=55.2
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-------CCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLC-------PNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~-------p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
++......|..+|..|+|..|+.-|..|++.. ...+.+|.+.|.||+++|++..|+.-..+|
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~a 72 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKL 72 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 46788999999999999999999999999863 346789999999999999999999877765
No 117
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=97.77 E-value=8.7e-05 Score=55.83 Aligned_cols=69 Identities=4% Similarity=0.015 Sum_probs=56.6
Q ss_pred eeCCEEEEEEEeCCCCCCcceEEeeccEEEEeec--------c-----eEEeecccCCcccCCceEEe-eCCEEEEEEee
Q psy5819 12 QTPSKVFITVPLYNVPTHKVDVFTSESYIKLHYG--------N-----YIFEKLLLRPIVEEASRIRL-ENNEAEFELIK 77 (296)
Q Consensus 12 QT~~~V~i~V~l~~~~~~~~~V~~~~~~lkv~~~--------~-----~~~~~~L~~~Id~e~S~~~i-~~~~v~i~L~K 77 (296)
.|++.+.|++.|||+.+.+++|.+.++.|.|+.. . |.-.+.|...|+++..++++ .++.|.|+|.|
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~pK 82 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGPR 82 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEECB
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEEc
Confidence 4778999999999999999999999999998763 1 23366799999999999999 79999999999
Q ss_pred cCc
Q psy5819 78 SEQ 80 (296)
Q Consensus 78 ~~~ 80 (296)
...
T Consensus 83 ~~~ 85 (90)
T 2y1y_A 83 KQV 85 (90)
T ss_dssp C--
T ss_pred CCC
Confidence 764
No 118
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=97.77 E-value=0.00015 Score=53.93 Aligned_cols=68 Identities=9% Similarity=0.073 Sum_probs=59.5
Q ss_pred EeeCCEEEEEEEeCCCCCCcceEEeeccEEEEeec-------------ceEEeecccCCcccCCceEEee-CCEEEEEEe
Q psy5819 11 RQTPSKVFITVPLYNVPTHKVDVFTSESYIKLHYG-------------NYIFEKLLLRPIVEEASRIRLE-NNEAEFELI 76 (296)
Q Consensus 11 ~QT~~~V~i~V~l~~~~~~~~~V~~~~~~lkv~~~-------------~~~~~~~L~~~Id~e~S~~~i~-~~~v~i~L~ 76 (296)
++|++.+.|.+.|||+.+.+++|.+.++.|.|+.. .|.=.+.|...||++.-++++. ++.|.|+|.
T Consensus 3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lP 82 (85)
T 3q9p_A 3 SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAP 82 (85)
T ss_dssp CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEEE
T ss_pred cCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEEE
Confidence 47899999999999999999999999999999862 1222667999999999999998 999999999
Q ss_pred ec
Q psy5819 77 KS 78 (296)
Q Consensus 77 K~ 78 (296)
|.
T Consensus 83 K~ 84 (85)
T 3q9p_A 83 MP 84 (85)
T ss_dssp CC
T ss_pred cC
Confidence 85
No 119
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.76 E-value=0.0001 Score=66.53 Aligned_cols=64 Identities=16% Similarity=0.066 Sum_probs=57.8
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...+..+...|..++..|+|..|+..|.+++.++|.++.+|.++|.||..+|++.+|+..+.++
T Consensus 96 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 159 (365)
T 4eqf_A 96 PGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNW 159 (365)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHHHH
Confidence 3457888999999999999999999999999999999999999999999999999999988765
No 120
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.74 E-value=6.3e-05 Score=68.03 Aligned_cols=61 Identities=10% Similarity=0.000 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..+++.|+|..|+..|.+++..+|.++.+|.++|.+|..+|++.+|+..+.+|
T Consensus 65 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 125 (365)
T 4eqf_A 65 WPGAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRC 125 (365)
T ss_dssp CTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 4558899999999999999999999999999999999999999999999999999999876
No 121
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.73 E-value=0.00017 Score=57.35 Aligned_cols=62 Identities=16% Similarity=0.096 Sum_probs=57.2
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|..|+..|.+++..+|.++.++.+.|.+|..+|++.+|+..+.++
T Consensus 109 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 170 (186)
T 3as5_A 109 NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKA 170 (186)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 46778889999999999999999999999999999999999999999999999999988765
No 122
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.72 E-value=0.00021 Score=56.90 Aligned_cols=60 Identities=15% Similarity=-0.017 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHh
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASE 294 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~ 294 (296)
+..+...|..++..|+|..|+..|.+++..+|.++.++.++|.+++.+|++.+|+..+.+
T Consensus 76 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 135 (186)
T 3as5_A 76 VKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKI 135 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 344444455555555555555555555555555555555555555555555555544443
No 123
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.72 E-value=0.00014 Score=60.02 Aligned_cols=63 Identities=11% Similarity=-0.036 Sum_probs=51.6
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHc-CCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLAL-NNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl-~~~~~Ai~D~~~A 295 (296)
..+..+...|..++..|+|..|+..|.+++.++|.++.++.++|.+|..+ |++.+|+..+.++
T Consensus 40 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~ 103 (225)
T 2vq2_A 40 KNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKA 103 (225)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 44667777888888888888888888888888888888888888888888 8888888877664
No 124
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=97.71 E-value=0.00011 Score=68.59 Aligned_cols=62 Identities=11% Similarity=0.004 Sum_probs=56.4
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh---------CCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQL---------CPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~---------~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|.+|+.+|.+|+++ +|..+..|.|+|.+|..+|+|.+|+..+.+|
T Consensus 50 ~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka 120 (472)
T 4g1t_A 50 KATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKV 120 (472)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 4667888999999999999999999999986 6678899999999999999999999998875
No 125
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.69 E-value=0.00012 Score=65.52 Aligned_cols=62 Identities=18% Similarity=0.178 Sum_probs=58.6
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|++.+|+..|.+++..+|+++.+++++|.+++.+|++.+|+..+.++
T Consensus 116 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~ 177 (287)
T 3qou_A 116 EEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTI 177 (287)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTS
T ss_pred chhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhC
Confidence 46778999999999999999999999999999999999999999999999999999988765
No 126
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.68 E-value=0.00017 Score=63.21 Aligned_cols=65 Identities=22% Similarity=0.198 Sum_probs=60.4
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhcC
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEVR 296 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A~ 296 (296)
...+..+...|..++..|+|..|+..|.+++.++|.++.++.++|.||..+|++.+|+..+.+|.
T Consensus 233 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 297 (330)
T 3hym_B 233 DKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTAL 297 (330)
T ss_dssp TTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHHTTT
T ss_pred cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 34467889999999999999999999999999999999999999999999999999999998763
No 127
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.68 E-value=0.00011 Score=65.51 Aligned_cols=61 Identities=18% Similarity=0.159 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChH-------HHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLAC-------LYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~-------ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|.+|+..|.+++.++|.+.. +|.|++.||+.+|++.+|+..+.+|
T Consensus 158 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 225 (292)
T 1qqe_A 158 NKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEG 225 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 456788899999999999999999999999987542 7899999999999999999999886
No 128
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.68 E-value=0.00016 Score=64.92 Aligned_cols=61 Identities=25% Similarity=0.243 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+++.++|.++.+|.++|.+|..+|++.+|+..+.+|
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 277 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRA 277 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4555555555555666666666666666555555555555555555555555555555543
No 129
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.67 E-value=0.00019 Score=53.80 Aligned_cols=63 Identities=19% Similarity=0.301 Sum_probs=56.8
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+..+...|..++..|++..|+..|.+++..+|.+..++.+.|.++..+|++.+|+..+.++
T Consensus 33 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~ 95 (136)
T 2fo7_A 33 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKA 95 (136)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 456778888999999999999999999999999999999999999999999999999888764
No 130
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.67 E-value=8.2e-05 Score=71.53 Aligned_cols=64 Identities=16% Similarity=0.127 Sum_probs=60.8
Q ss_pred CCChHHHHHHHHHHHHcCCH-HHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNY-LGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y-~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...+..+...|..++..|+| .+|+..|.+||+++|.++.+|+++|.||+.+|++.+|+..+.+|
T Consensus 99 ~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 163 (474)
T 4abn_A 99 QVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGA 163 (474)
T ss_dssp CCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 35688999999999999999 99999999999999999999999999999999999999999876
No 131
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.66 E-value=0.00024 Score=53.21 Aligned_cols=64 Identities=19% Similarity=0.294 Sum_probs=58.5
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...+..+...|..++..|+|..|+..|.+++...|.+..++.++|.+|..+|++.+|+..+..+
T Consensus 66 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 129 (136)
T 2fo7_A 66 PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKA 129 (136)
T ss_dssp TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 3456778889999999999999999999999999999999999999999999999999888765
No 132
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.66 E-value=0.00016 Score=64.82 Aligned_cols=65 Identities=22% Similarity=0.191 Sum_probs=60.7
Q ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 231 EENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
....+..+...|..++..|+|..|+..|.+++.++|.++.+|.++|.+|+.+|++.+|+..+.+|
T Consensus 247 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 311 (368)
T 1fch_A 247 RPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEA 311 (368)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 34567889999999999999999999999999999999999999999999999999999998876
No 133
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.64 E-value=0.00013 Score=71.11 Aligned_cols=65 Identities=11% Similarity=0.035 Sum_probs=52.2
Q ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 231 EENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
....+..+...|..++..|+|.+|+..|.++++++|.++.+|+|+|.||..+|++.+|+..+.+|
T Consensus 53 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~a 117 (568)
T 2vsy_A 53 HPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRA 117 (568)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34457777888888888888888888888888888888888888888888888888888877765
No 134
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.62 E-value=0.00031 Score=52.89 Aligned_cols=64 Identities=17% Similarity=0.086 Sum_probs=57.7
Q ss_pred CCChHHHHHHHHHHHHcCC---HHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGN---YLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~---y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..++..+...|..++..++ ..+|...+.+||.++|+++.+++..|..++..|+|.+|+..+.++
T Consensus 3 p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~ 69 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLL 69 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3468899999999976665 799999999999999999999999999999999999999988764
No 135
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.61 E-value=0.00029 Score=59.84 Aligned_cols=63 Identities=14% Similarity=-0.018 Sum_probs=55.1
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+..+...|..++..|+|..|+..|.+++..+|.+..++.++|.+|+.+|++.+|+..+.++
T Consensus 69 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 131 (252)
T 2ho1_A 69 SSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEA 131 (252)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 346778888999999999999999999999999999999999999999999999998888765
No 136
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.61 E-value=0.00017 Score=67.56 Aligned_cols=61 Identities=30% Similarity=0.449 Sum_probs=57.9
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|+.+++.|+|..|+..|++++..+| ++.+|.++|.||+.+|++.+|+..+.+|
T Consensus 5 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~la~~~~~~g~~~~A~~~~~~a 65 (514)
T 2gw1_A 5 YALALKDKGNQFFRNKKYDDAIKYYNWALELKE-DPVFYSNLSACYVSVGDLKKVVEMSTKA 65 (514)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc-cHHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 467899999999999999999999999999999 6999999999999999999999999876
No 137
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.60 E-value=0.0003 Score=59.04 Aligned_cols=60 Identities=13% Similarity=0.033 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHh
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASE 294 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~ 294 (296)
+..+...|..++..|+|..|+..|.+++.++|.++.++.++|.+|+.+|++.+|+..+.+
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 116 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEK 116 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 445555555555555555555555555555555555555555555555555555555443
No 138
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.60 E-value=0.00013 Score=66.69 Aligned_cols=62 Identities=26% Similarity=0.297 Sum_probs=43.0
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..+++.|+|.+|+..|.+++.++|++..+|.+++.++..+|++.+|+..+.++
T Consensus 66 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 127 (388)
T 1w3b_A 66 LAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSA 127 (388)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHH
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 45666677777777777777777777777777777777777777777777777776666543
No 139
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=97.58 E-value=0.00025 Score=62.71 Aligned_cols=62 Identities=21% Similarity=0.302 Sum_probs=58.9
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
++..+...|..++..|+|..|+..|.+++..+|.++.+++++|.||+.+|++.+|+..+.++
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 63 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKV 63 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 36778999999999999999999999999999999999999999999999999999999875
No 140
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.57 E-value=0.00031 Score=57.98 Aligned_cols=64 Identities=8% Similarity=0.012 Sum_probs=52.2
Q ss_pred CCChHHHHHHHHHHHHc-CCHHHHHHHHHHHHh--hCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRD-GNYLGAVSAYSHGLQ--LCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~-g~y~~Ai~~Yt~AI~--~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...+..+...|..++.. |+|..|+..|.+++. ..|.+..++.++|.||..+|++.+|+..+.++
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~ 139 (225)
T 2vq2_A 73 PDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRS 139 (225)
T ss_dssp TTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34567778888888888 888888888888888 56666788888888888888888888887764
No 141
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.57 E-value=0.00036 Score=58.51 Aligned_cols=61 Identities=11% Similarity=0.050 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+++..+|.++.++.++|.+|+.+|++.+|+..+.++
T Consensus 91 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 151 (243)
T 2q7f_A 91 ATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRA 151 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 4555556666666666666666666666666666666666666666666666666555543
No 142
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.56 E-value=0.00033 Score=61.25 Aligned_cols=60 Identities=15% Similarity=0.185 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHh
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASE 294 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~ 294 (296)
+..+...|..++..|+|..|+..|.+++..+|.++.++.++|.+|+.+|++.+|+..+.+
T Consensus 206 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 265 (327)
T 3cv0_A 206 AQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVR 265 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 444555555555566666666666666666665555666666666666666666555544
No 143
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.55 E-value=0.00012 Score=70.31 Aligned_cols=64 Identities=19% Similarity=0.066 Sum_probs=58.9
Q ss_pred CCChHHHHHHHHHHHHc--------CCHHHHHHHHHHHHhhCC---CChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRD--------GNYLGAVSAYSHGLQLCP---NLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~--------g~y~~Ai~~Yt~AI~~~p---~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..++..+...|..++.. |+|.+|+.+|.+|+.++| .++.+|+|+|.||..+|+|.+|+..+.+|
T Consensus 210 p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 284 (474)
T 4abn_A 210 VLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQA 284 (474)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34578889999999998 999999999999999999 99999999999999999999999998876
No 144
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.55 E-value=0.00022 Score=69.39 Aligned_cols=63 Identities=17% Similarity=0.170 Sum_probs=41.7
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHc---CCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLAL---NNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl---~~~~~Ai~D~~~A 295 (296)
.++..+...|..++..|+|.+|+..|.++++++|.++.++.|++.+|..+ |++.+|+..+.++
T Consensus 89 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~a 154 (568)
T 2vsy_A 89 EHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAA 154 (568)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHH
Confidence 34556666666666666666666666666666666666666666666666 6666666666554
No 145
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.53 E-value=7.7e-05 Score=75.18 Aligned_cols=61 Identities=15% Similarity=-0.008 Sum_probs=37.9
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHH
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDAS 293 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~ 293 (296)
..++..+...|..++..|+|.+|+..|.+||+++|+++.+|+|+|.||..+|+|.+ +..+.
T Consensus 464 p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~ 524 (681)
T 2pzi_A 464 GWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQ 524 (681)
T ss_dssp CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHH
T ss_pred cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHH
Confidence 34466777777777777777777777777777666555555555444444444444 44443
No 146
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=97.51 E-value=2.3e-05 Score=60.07 Aligned_cols=49 Identities=20% Similarity=0.112 Sum_probs=42.0
Q ss_pred HcCCHHHHHHHHHHHHhh---CCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 247 RDGNYLGAVSAYSHGLQL---CPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 247 k~g~y~~Ai~~Yt~AI~~---~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..|+|..|+..|.++|.+ +|.++.++.|+|.||+.+|+|.+|+..+.+|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~a 53 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANG 53 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 468999999999999999 6889999999999999999999999999876
No 147
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.50 E-value=0.00021 Score=60.68 Aligned_cols=61 Identities=16% Similarity=0.048 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+++..+|.++.++.++|.+|+.+|++.+|+..+.++
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 97 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKA 97 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 6778899999999999999999999999999999999999999999999999999988765
No 148
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.49 E-value=0.00042 Score=49.27 Aligned_cols=51 Identities=27% Similarity=0.356 Sum_probs=47.3
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcC
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALN 283 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~ 283 (296)
..+..+...|..++..|+|..|+..|.+++.++|.++.++.|++.++..+|
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 41 NNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcC
Confidence 346788999999999999999999999999999999999999999998875
No 149
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.49 E-value=0.00039 Score=64.22 Aligned_cols=65 Identities=20% Similarity=0.277 Sum_probs=60.4
Q ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 231 EENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...++..+...|..+++.|+|..|+..|.+++..+|.++.+|+++|.||+.+|++.+|+..+.+|
T Consensus 22 ~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 86 (450)
T 2y4t_A 22 SMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKV 86 (450)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 34457889999999999999999999999999999999999999999999999999999999875
No 150
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=97.49 E-value=0.00024 Score=61.56 Aligned_cols=61 Identities=18% Similarity=0.148 Sum_probs=56.4
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC---ChHHHHHHHHHHHH--------cCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPN---LACLYSNRAAAHLA--------LNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~---~~~ly~NRA~~~lk--------l~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.++|.+.|. .+.+++++|.||+. +|++.+|+..+.++
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~ 123 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLF 123 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHH
Confidence 778999999999999999999999999999885 46789999999999 99999999998865
No 151
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.48 E-value=0.00041 Score=60.74 Aligned_cols=61 Identities=18% Similarity=-0.074 Sum_probs=34.3
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHh
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASE 294 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~ 294 (296)
.+..+...|..++..|+|..|+..|.+++.+.|.+...+.++|.+|..+|++.+|+..+.+
T Consensus 124 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 184 (330)
T 3hym_B 124 YGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQ 184 (330)
T ss_dssp CTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3444555555555555555555555555555555555555555555555555555555544
No 152
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.47 E-value=0.0002 Score=63.58 Aligned_cols=62 Identities=11% Similarity=0.184 Sum_probs=55.4
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------hHHHHHHHHHHHHcC-CHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL------ACLYSNRAAAHLALN-NLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~------~~ly~NRA~~~lkl~-~~~~Ai~D~~~A 295 (296)
.+..+.+.|..++..|+|..|+..|.+||.+.+.. +.+|.|+|.||.++| ++.+|+..+.+|
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~A 263 (293)
T 3u3w_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKA 263 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHH
Confidence 35678899999999999999999999999887543 799999999999999 579999999876
No 153
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.46 E-value=0.00043 Score=59.04 Aligned_cols=57 Identities=12% Similarity=0.033 Sum_probs=51.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCh---HHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 239 KAKGDQMFRDGNYLGAVSAYSHGLQLCPNLA---CLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 239 k~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~---~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...|..+++.|+|.+|+..|.++|+..|+++ .++.+++.||.++|++.+|+..+..+
T Consensus 151 ~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l 210 (225)
T 2yhc_A 151 YSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKII 210 (225)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 4678899999999999999999999999876 67999999999999999999887653
No 154
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.46 E-value=0.00031 Score=57.50 Aligned_cols=64 Identities=11% Similarity=-0.083 Sum_probs=58.5
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL--ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~--~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..++..+...|..++..|+|.+|+..|.++|+.+|.. +.++.+.+.++..+|++.+|+..+.++
T Consensus 105 P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~a 170 (176)
T 2r5s_A 105 PDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQ 170 (176)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 3457889999999999999999999999999999975 679999999999999999999998875
No 155
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.45 E-value=0.00021 Score=63.68 Aligned_cols=61 Identities=15% Similarity=0.115 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCCC------hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRD-GNYLGAVSAYSHGLQLCPNL------ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~-g~y~~Ai~~Yt~AI~~~p~~------~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..+... |+|..|+.+|.+||.+.|.. +.+|.|.|.+|+.+|+|.+|+..+.+|
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 184 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKL 184 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 56788899999996 99999999999999998754 578999999999999999999998875
No 156
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=97.45 E-value=0.00047 Score=59.90 Aligned_cols=61 Identities=18% Similarity=0.254 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC----hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL----ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~----~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...+...|..++..|+|..|+..|.+++..+|.+ +.+|.++|.+|+.+|++.+|+..+.+|
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 69 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHD 69 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3567778999999999999999999999999987 478889999999999999999888765
No 157
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=97.45 E-value=0.0004 Score=65.63 Aligned_cols=62 Identities=21% Similarity=0.263 Sum_probs=58.5
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHH
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDAS 293 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~ 293 (296)
..++..+...|..++..|+|..|+..|.+++.++|.++.++.++|.||..+|++.+|+..+.
T Consensus 56 p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~ 117 (537)
T 3fp2_A 56 PNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLS 117 (537)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 34578899999999999999999999999999999999999999999999999999999874
No 158
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.45 E-value=0.00047 Score=62.84 Aligned_cols=61 Identities=18% Similarity=0.144 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+++.++|.++.+|.+++.+|..+|++.+|+..+.+|
T Consensus 237 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 297 (388)
T 1w3b_A 237 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTA 297 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4455556666666666666666666666666666666666666666666666666555543
No 159
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=97.44 E-value=0.0005 Score=62.06 Aligned_cols=63 Identities=17% Similarity=0.249 Sum_probs=54.1
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC----hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL----ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~----~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+..+...|..++..|+|..|+..|.+++.+.|.+ +.+|.++|.+|+.+|+|.+|+..+.+|
T Consensus 7 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 73 (406)
T 3sf4_A 7 ASCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHD 73 (406)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 346778888999999999999999999999998887 468889999999999999999887765
No 160
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.44 E-value=0.00058 Score=59.72 Aligned_cols=63 Identities=16% Similarity=0.070 Sum_probs=58.2
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+..+...|..++..|+|..|+..|.+++.++|.++.++.++|.+|..+|++.+|+..+.++
T Consensus 53 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 115 (327)
T 3cv0_A 53 EREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAW 115 (327)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 357788889999999999999999999999999999999999999999999999999988765
No 161
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.41 E-value=0.00055 Score=60.68 Aligned_cols=61 Identities=10% Similarity=0.026 Sum_probs=53.7
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHH---hhCCCC----hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGL---QLCPNL----ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI---~~~p~~----~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+|+ ...+.+ +.+|+|.|.||..+|+|.+|+..+.+|
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~ka 222 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKA 222 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 5678899999999999999999999999 445553 269999999999999999999998876
No 162
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.41 E-value=0.00048 Score=62.95 Aligned_cols=63 Identities=16% Similarity=0.191 Sum_probs=56.9
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCh----HHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLA----CLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~----~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+..+...|..++..|+|..|+..|.+++.++|.+. .+|.++|.+|+.+|++.+|+..+.+|
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 112 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHD 112 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 3467788999999999999999999999999999876 68999999999999999999988765
No 163
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.35 E-value=0.00045 Score=53.40 Aligned_cols=61 Identities=20% Similarity=0.118 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL------ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~------~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+++.+.+.. +.++.|+|.+|..+|++.+|+..+.+|
T Consensus 49 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 115 (164)
T 3ro3_A 49 RIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKH 115 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3567778888888999999999999988775542 578888888888888888888877765
No 164
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.34 E-value=0.00061 Score=61.07 Aligned_cols=62 Identities=10% Similarity=0.002 Sum_probs=50.5
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHH-HHHHh
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAV-DDASE 294 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai-~D~~~ 294 (296)
.++..+...|..+++.|+|.+|+..|.++|.++|.++.++.|++.++..+|++.+++ ..+.+
T Consensus 198 ~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~ 260 (291)
T 3mkr_A 198 PTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQ 260 (291)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 357778888888888999999999999999999988888899998888888887654 33343
No 165
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.33 E-value=0.00026 Score=62.79 Aligned_cols=61 Identities=10% Similarity=-0.008 Sum_probs=53.0
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-------CCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLC-------PNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~-------p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+||... +..+.+|+|.|.+|..+|+|.+|+..+.+|
T Consensus 155 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~a 222 (293)
T 3u3w_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKA 222 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4468899999999999999999999999532 234579999999999999999999998876
No 166
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=97.31 E-value=0.00067 Score=57.41 Aligned_cols=73 Identities=8% Similarity=0.030 Sum_probs=60.2
Q ss_pred cEEEeeCCEEEEEEEeCCCCCCcceEEeeccEEEEeec--------c-----eEEeecccCCcccCCceEEe-eCCEEEE
Q psy5819 8 SCWRQTPSKVFITVPLYNVPTHKVDVFTSESYIKLHYG--------N-----YIFEKLLLRPIVEEASRIRL-ENNEAEF 73 (296)
Q Consensus 8 y~W~QT~~~V~i~V~l~~~~~~~~~V~~~~~~lkv~~~--------~-----~~~~~~L~~~Id~e~S~~~i-~~~~v~i 73 (296)
..+.++++.+.|++.|||+.+.+++|.+.++.|.|+.. . |.-.+.|...||++..++++ .+|.|.|
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I 145 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTV 145 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEE
Confidence 35778999999999999999999999999999999763 1 22366799999999999999 6999999
Q ss_pred EEeecCc
Q psy5819 74 ELIKSEQ 80 (296)
Q Consensus 74 ~L~K~~~ 80 (296)
+|.|+..
T Consensus 146 ~lPK~~~ 152 (175)
T 2klr_A 146 NGPRKQV 152 (175)
T ss_dssp EEECC--
T ss_pred EEECCCC
Confidence 9999764
No 167
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=97.28 E-value=0.00045 Score=53.40 Aligned_cols=61 Identities=21% Similarity=0.227 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL------ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~------~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+++.+.+.. +.++.+.|.+|+.+|++.+|+..+.+|
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 75 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKT 75 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 5567889999999999999999999999886642 368999999999999999999998875
No 168
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=97.27 E-value=0.00041 Score=59.09 Aligned_cols=62 Identities=13% Similarity=0.040 Sum_probs=56.8
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQL--------CPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~--------~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|..|+..|.+++.+ +|....+|.|+|.+|+.+|++.+|+..+.+|
T Consensus 84 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 153 (283)
T 3edt_B 84 VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRA 153 (283)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4677889999999999999999999999988 4677899999999999999999999988775
No 169
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=97.25 E-value=0.00048 Score=58.60 Aligned_cols=62 Identities=18% Similarity=0.100 Sum_probs=57.0
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQL--------CPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~--------~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|..|+..|.+++.+ .|....++.+.|.||+.+|++.+|+..+.++
T Consensus 126 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 195 (283)
T 3edt_B 126 VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEI 195 (283)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4677889999999999999999999999998 7777899999999999999999999988765
No 170
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.22 E-value=0.00041 Score=62.20 Aligned_cols=59 Identities=15% Similarity=0.086 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 236 DWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL------ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 236 ~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~------~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+...|..+.. |+|..|+.+|.+||.+.+.. +.+|.|.|.+|..+|+|.+|+..+.+|
T Consensus 117 ~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 181 (307)
T 2ifu_A 117 MALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKE 181 (307)
T ss_dssp HHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 445555666655 66666666666666655432 456666666666666666666666554
No 171
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.16 E-value=0.00045 Score=61.25 Aligned_cols=60 Identities=12% Similarity=0.178 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------ChHHHHHHHHHHHHcCCHHHH-HHHHHhc
Q psy5819 236 DWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPN------LACLYSNRAAAHLALNNLHKA-VDDASEV 295 (296)
Q Consensus 236 ~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~------~~~ly~NRA~~~lkl~~~~~A-i~D~~~A 295 (296)
..+.+.|..++..|+|..|+..|.+||.+.+. .+.+|+|.|.||..+|++.+| ...+.+|
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~A 263 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKA 263 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 67889999999999999999999999988643 378999999999999999999 4446654
No 172
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=97.15 E-value=0.00093 Score=61.13 Aligned_cols=61 Identities=18% Similarity=0.156 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----hC-CCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQ-----LC-PNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~-----~~-p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+.+.|..++..|+|..|+..|.+|+. .+ |..+.++.|.|.+|+.+|++.+|+..+.+|
T Consensus 224 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 290 (383)
T 3ulq_A 224 GRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKG 290 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 45788999999999999999999999999 46 778899999999999999999999988876
No 173
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.15 E-value=0.00068 Score=60.78 Aligned_cols=51 Identities=18% Similarity=0.146 Sum_probs=47.4
Q ss_pred HHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 245 MFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 245 ~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+...|+|.+|+..|.+++..+|.++.+|+|+|.|++++|++.+|+..+.+|
T Consensus 176 ~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~a 226 (291)
T 3mkr_A 176 AAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEA 226 (291)
T ss_dssp HHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 344589999999999999999999999999999999999999999999876
No 174
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.14 E-value=0.0007 Score=55.30 Aligned_cols=62 Identities=10% Similarity=-0.164 Sum_probs=55.7
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQL------CPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~------~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|..|+..|.+++.+ .+..+.++.|+|.+|..+|++.+|+..+.+|
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 92 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEE 92 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4778899999999999999999999999984 4456789999999999999999999998876
No 175
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.14 E-value=0.00079 Score=60.33 Aligned_cols=62 Identities=8% Similarity=0.057 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------hHHHHHHHHHHHHcCCHHHHHHHHHhcC
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL------ACLYSNRAAAHLALNNLHKAVDDASEVR 296 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~------~~ly~NRA~~~lkl~~~~~Ai~D~~~A~ 296 (296)
+..+...|..++..|+|.+|+..|.+++.+.+.+ ..++.+++.||+.+|++.+|+..+.+|.
T Consensus 155 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 155 AELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 5678889999999999999999999999986643 3589999999999999999999998763
No 176
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.05 E-value=0.0024 Score=55.33 Aligned_cols=61 Identities=16% Similarity=0.070 Sum_probs=44.2
Q ss_pred CChHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHH----cCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFR----DGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLA----LNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk----~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lk----l~~~~~Ai~D~~~A 295 (296)
..+..+...|..++. .|++..|+..|.+|++.+ ++.++++.|.+|.. .+++.+|+..+.+|
T Consensus 36 ~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a 104 (273)
T 1ouv_A 36 KENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKA 104 (273)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHH
Confidence 345666677777777 777777777777777765 67777777777777 77777777776654
No 177
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=97.05 E-value=0.0026 Score=58.65 Aligned_cols=76 Identities=5% Similarity=-0.056 Sum_probs=66.0
Q ss_pred CCcEEEeeCC----EEEEEEEeCCCCCCcceEEeeccEEEEeec------------ceEEeecccCCcccCCceEEee-C
Q psy5819 6 KESCWRQTPS----KVFITVPLYNVPTHKVDVFTSESYIKLHYG------------NYIFEKLLLRPIVEEASRIRLE-N 68 (296)
Q Consensus 6 ~~y~W~QT~~----~V~i~V~l~~~~~~~~~V~~~~~~lkv~~~------------~~~~~~~L~~~Id~e~S~~~i~-~ 68 (296)
|..+.+.+++ .+.|++.|||+.+.+++|.+.++.|.|+.. .|.=.+.|...|+++..++++. +
T Consensus 99 p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~n 178 (314)
T 2bol_A 99 FLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATITTD 178 (314)
T ss_dssp GGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEECSS
T ss_pred CccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEeCC
Confidence 4566778888 899999999999999999999999999863 2333677999999999999999 9
Q ss_pred CEEEEEEeecCcc
Q psy5819 69 NEAEFELIKSEQA 81 (296)
Q Consensus 69 ~~v~i~L~K~~~~ 81 (296)
|.|.|+|.|..+.
T Consensus 179 GVL~I~lPK~~~~ 191 (314)
T 2bol_A 179 DVLVIEAPVNEPN 191 (314)
T ss_dssp SEEEEEEEBSSCC
T ss_pred CEEEEEEeccCcc
Confidence 9999999998754
No 178
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.03 E-value=0.0019 Score=61.98 Aligned_cols=61 Identities=21% Similarity=0.091 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..+++.|+|..|+..|.+++.++|.++.+|.+++.+|..+|++.+|+..+.++
T Consensus 516 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 576 (597)
T 2xpi_A 516 AATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLHES 576 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 5678899999999999999999999999999999999999999999999999999998875
No 179
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.01 E-value=0.001 Score=57.58 Aligned_cols=63 Identities=17% Similarity=0.103 Sum_probs=57.1
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQL--------CPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~--------~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+..+...|..++..|+|..|+..|.+++.+ .+..+.++.++|.+|..+|++.+|+..+.+|
T Consensus 25 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 95 (311)
T 3nf1_A 25 ARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDA 95 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 34678899999999999999999999999985 5667899999999999999999999988775
No 180
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=97.00 E-value=0.0011 Score=60.66 Aligned_cols=61 Identities=8% Similarity=0.034 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL------ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~------~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+|+.+.+.. +.+|.|+|.||..+|++.+|+..+.+|
T Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~a 250 (383)
T 3ulq_A 184 LQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRA 250 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 5678889999999999999999999999886532 369999999999999999999998876
No 181
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.00 E-value=0.0011 Score=57.33 Aligned_cols=62 Identities=19% Similarity=0.168 Sum_probs=56.5
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQL--------CPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~--------~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|..|+..|.+++.+ .|..+.++.++|.+|+.+|++.+|+..+.+|
T Consensus 152 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 221 (311)
T 3nf1_A 152 VAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEI 221 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3567888999999999999999999999998 6777889999999999999999999988765
No 182
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=96.99 E-value=0.0015 Score=53.26 Aligned_cols=62 Identities=16% Similarity=0.118 Sum_probs=54.0
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh---CC----CChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQL---CP----NLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~---~p----~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|..|+..|.+++.+ .+ ..+.++.|.|.+|+.+|++.+|+..+.+|
T Consensus 65 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 133 (203)
T 3gw4_A 65 EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKS 133 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 3567888999999999999999999999988 33 34578999999999999999999888765
No 183
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=96.99 E-value=0.0013 Score=60.23 Aligned_cols=61 Identities=13% Similarity=-0.018 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----hCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQ-----LCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~-----~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+.+.|..++..|+|..|+..|.+|+. .+|..+.++.|.|.+|.++|++.+|+..+.+|
T Consensus 222 ~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 287 (378)
T 3q15_A 222 AISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEG 287 (378)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 56678889999999999999999999998 67777899999999999999999999988775
No 184
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.96 E-value=0.002 Score=57.37 Aligned_cols=65 Identities=9% Similarity=-0.060 Sum_probs=60.0
Q ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 231 EENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL--ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~--~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...++..+...|..++..|+|.+|+..|.++|..+|++ ..++.+++.++..+|+..+|+..+.++
T Consensus 215 ~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~a 281 (287)
T 3qou_A 215 NPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQ 281 (287)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 34567889999999999999999999999999999998 899999999999999999999988775
No 185
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=96.96 E-value=0.0014 Score=49.24 Aligned_cols=43 Identities=7% Similarity=-0.061 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 253 GAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 253 ~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.|+..|.+++..+|.++.+++++|.+|+.+|+|.+|+..+.+|
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 45 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAA 45 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999876
No 186
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=96.93 E-value=0.0018 Score=47.11 Aligned_cols=42 Identities=19% Similarity=0.311 Sum_probs=38.1
Q ss_pred CChH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHH
Q psy5819 233 NNPD-WVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSN 274 (296)
Q Consensus 233 ~~~~-~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~N 274 (296)
..+. .+...|..++..|+|..|+..|.++|.++|.++.++.+
T Consensus 32 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 74 (99)
T 2kc7_A 32 VGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR 74 (99)
T ss_dssp STHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH
T ss_pred CcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 3467 88999999999999999999999999999999988855
No 187
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=96.83 E-value=0.00067 Score=56.51 Aligned_cols=49 Identities=14% Similarity=0.039 Sum_probs=44.9
Q ss_pred HcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCH----------HHHHHHHHhc
Q psy5819 247 RDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNL----------HKAVDDASEV 295 (296)
Q Consensus 247 k~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~----------~~Ai~D~~~A 295 (296)
+.+.|.+|+.+|.+|+.++|.++.+|.|.+.|++.++++ .+||..+.+|
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~A 72 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEA 72 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHH
Confidence 457799999999999999999999999999999999886 4999998876
No 188
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.80 E-value=0.0038 Score=55.67 Aligned_cols=62 Identities=13% Similarity=-0.076 Sum_probs=46.0
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChH-HHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLAC-LYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~-ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|.-+...|++..|+..|.++|++.|.++. +|.+.+.++..+|++.+|+..+.+|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 160 (308)
T 2ond_A 98 NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKA 160 (308)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 4556667777777777777777777777777777765 7777777777777777777776655
No 189
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=96.80 E-value=0.0044 Score=59.43 Aligned_cols=62 Identities=11% Similarity=0.003 Sum_probs=50.9
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..+++.|+|.+|+..|.+++.++|.+..+|++++.+|.+.|++.+|+..+.++
T Consensus 372 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 433 (597)
T 2xpi_A 372 KAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTA 433 (597)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 46667778888888888888888888888888888888888888888888888888877654
No 190
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=96.74 E-value=0.0019 Score=58.89 Aligned_cols=60 Identities=18% Similarity=0.113 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 236 DWVKAKGDQMFRDGNYLGAVSAYSHGLQL------CPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 236 ~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~------~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+...|..++..|+|..|+..|.+++.+ .+..+.++.++|.+|+.+|++.+|+..+.+|
T Consensus 87 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 152 (411)
T 4a1s_A 87 AIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERH 152 (411)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 56889999999999999999999999988 5677899999999999999999999998875
No 191
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=96.68 E-value=0.0031 Score=56.75 Aligned_cols=60 Identities=20% Similarity=0.144 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 236 DWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL------ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 236 ~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~------~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+...|..++..|+|..|+..|.+++.+.+.. +.++.++|.+|+.+|++.+|+..+.+|
T Consensus 228 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 293 (406)
T 3sf4_A 228 RAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKH 293 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 355666677777777777777777777665543 566667777777777777776666544
No 192
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=96.64 E-value=0.003 Score=54.65 Aligned_cols=61 Identities=20% Similarity=0.130 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQL------CPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~------~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+++.+ .+..+.++.++|.+|+.+|++.+|+..+.+|
T Consensus 43 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 109 (338)
T 3ro2_A 43 SAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRH 109 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 467788999999999999999999999987 4456789999999999999999999988765
No 193
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=96.59 E-value=0.0027 Score=58.07 Aligned_cols=59 Identities=17% Similarity=0.161 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCC------CChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 237 WVKAKGDQMFRDGNYLGAVSAYSHGLQLCP------NLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 237 ~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p------~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+.-+|..++..|+|..|+..|.+|+.+.+ ..+.+|++.|.+|..+|++..|+..+.+|
T Consensus 103 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~a 167 (378)
T 3q15_A 103 SLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQA 167 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 566789999999999999999999998743 35689999999999999999999998876
No 194
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.52 E-value=0.011 Score=50.96 Aligned_cols=60 Identities=17% Similarity=0.118 Sum_probs=51.6
Q ss_pred ChHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHH----cCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFR----DGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLA----LNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk----~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lk----l~~~~~Ai~D~~~A 295 (296)
.+..+...|..++. .|++..|+..|.+|+..+ ++.+++++|.+|.. .+++.+|+..+.+|
T Consensus 73 ~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a 140 (273)
T 1ouv_A 73 YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKA 140 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHH
Confidence 57777888888888 899999999999998874 78889999999999 99999999888765
No 195
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=96.47 E-value=0.0062 Score=60.21 Aligned_cols=66 Identities=6% Similarity=-0.104 Sum_probs=50.4
Q ss_pred cCCCChHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcC-CHHHHHHHHHhc
Q psy5819 230 PEENNPDWVKAKGDQMFRDG--NYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALN-NLHKAVDDASEV 295 (296)
Q Consensus 230 ~~~~~~~~lk~~Gn~~fk~g--~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~-~~~~Ai~D~~~A 295 (296)
...++...+..+|-.+.+.| +|.+|+.+|.++|+++|.+..+|++|+.+...+| .+.++++.++++
T Consensus 102 ~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~ 170 (567)
T 1dce_A 102 VNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSL 170 (567)
T ss_dssp HCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTT
T ss_pred hCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 44556677777777777777 6688888888888888888888888888888887 777777777765
No 196
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=96.44 E-value=0.0052 Score=58.94 Aligned_cols=62 Identities=10% Similarity=0.025 Sum_probs=54.4
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQL--------CPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~--------~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
-+..+.+.|..+..+|+|.+|+..|.++|.+ .|+-+..|+|.|..|..+|+|.+|+.-+.+|
T Consensus 339 ~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~A 408 (433)
T 3qww_A 339 MLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKA 408 (433)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 3566788999999999999999999999965 3345689999999999999999999988876
No 197
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.34 E-value=0.0069 Score=55.63 Aligned_cols=62 Identities=10% Similarity=0.020 Sum_probs=54.2
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCh-----------------HHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLA-----------------CLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~-----------------~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.|....++|..+++.|+|.+|+..|.++++..+... .++.+++.+|..+|+|.+|+..+..+
T Consensus 3 ~p~~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~ 81 (434)
T 4b4t_Q 3 LPGSKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHS 81 (434)
T ss_dssp STTHHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 356678899999999999999999999999988532 46899999999999999999887765
No 198
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=96.31 E-value=0.0068 Score=50.03 Aligned_cols=63 Identities=10% Similarity=-0.068 Sum_probs=56.7
Q ss_pred CChHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhC-C-CChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDG---NYLGAVSAYSHGLQLC-P-NLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g---~y~~Ai~~Yt~AI~~~-p-~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+++...+-|..+.+.+ ++..||..+...++.+ | ....+++|+|.+|+++|+|.+|+..|+.+
T Consensus 30 ~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~l 97 (152)
T 1pc2_A 30 VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGL 97 (152)
T ss_dssp CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 35778889999999988 7889999999999998 7 56899999999999999999999999875
No 199
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=96.30 E-value=0.014 Score=57.76 Aligned_cols=53 Identities=8% Similarity=-0.130 Sum_probs=35.2
Q ss_pred CCChHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCC
Q psy5819 232 ENNPDWVKAKGDQMFRDG-NYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNN 284 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g-~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~ 284 (296)
..+...+..+|..+...| .|++|+.+|+++|+.+|.+.++|.+|+.++.+++.
T Consensus 140 ~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~ 193 (567)
T 1dce_A 140 ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHP 193 (567)
T ss_dssp TTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSC
T ss_pred cccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhcc
Confidence 344556666666666666 66777777777777777777777777776666544
No 200
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=96.28 E-value=0.01 Score=44.66 Aligned_cols=45 Identities=13% Similarity=0.073 Sum_probs=41.5
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHH
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRA 276 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA 276 (296)
...+..+...|..+|+.|++..|+..|.+|+.++|.+..+..|++
T Consensus 43 ~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 43 IDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp SCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 345778899999999999999999999999999999999999987
No 201
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.26 E-value=0.013 Score=52.22 Aligned_cols=64 Identities=16% Similarity=0.126 Sum_probs=55.6
Q ss_pred CCChHHHHHHHHHHH-------HcCCH-------HHHHHHHHHHHh-hCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMF-------RDGNY-------LGAVSAYSHGLQ-LCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~f-------k~g~y-------~~Ai~~Yt~AI~-~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..++..+...|.-+. ..|++ ..|+..|.+||. ++|++..+|.+.+.++..+|++.+|+..+.+|
T Consensus 47 p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 125 (308)
T 2ond_A 47 GHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRL 125 (308)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 345677777787776 45886 999999999999 79999999999999999999999999988876
No 202
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.20 E-value=0.017 Score=48.35 Aligned_cols=59 Identities=22% Similarity=0.189 Sum_probs=49.2
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC---C----------------------ChHHHHHHHHHHHHcCCHHHHH
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCP---N----------------------LACLYSNRAAAHLALNNLHKAV 289 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p---~----------------------~~~ly~NRA~~~lkl~~~~~Ai 289 (296)
...+.--|+.+|..|+|..|...|.+||.+.. . +..+.+.-|.||+++|++..||
T Consensus 63 ~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai 142 (167)
T 3ffl_A 63 YQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAI 142 (167)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHH
Confidence 56778889999999999999999999985421 1 1268899999999999999999
Q ss_pred HHHH
Q psy5819 290 DDAS 293 (296)
Q Consensus 290 ~D~~ 293 (296)
.-..
T Consensus 143 ~~Le 146 (167)
T 3ffl_A 143 AILD 146 (167)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8654
No 203
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=96.11 E-value=0.0095 Score=57.99 Aligned_cols=62 Identities=5% Similarity=-0.097 Sum_probs=54.4
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CC---CChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQL-----CP---NLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~-----~p---~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+.+.|..+..+|+|.+|+..|.++|.+ .| .-+..|+|.|..|..+|+|.+|+.-+.+|
T Consensus 350 ~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~A 419 (490)
T 3n71_A 350 VLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKA 419 (490)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 4667888999999999999999999999965 33 35689999999999999999999988876
No 204
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=95.89 E-value=0.025 Score=51.64 Aligned_cols=65 Identities=5% Similarity=-0.200 Sum_probs=58.2
Q ss_pred CCCChHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCChHHHHHHHHHH----HHc---CCHHHHHHHHHhc
Q psy5819 231 EENNPDWVKAKGDQMFRDG--NYLGAVSAYSHGLQLCPNLACLYSNRAAAH----LAL---NNLHKAVDDASEV 295 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g--~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~----lkl---~~~~~Ai~D~~~A 295 (296)
+......+..+|..+...| +|.+|+.++..+|..+|++..++++|+.+. ..+ +++.+++.-|+++
T Consensus 63 nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~ 136 (306)
T 3dra_A 63 LASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAM 136 (306)
T ss_dssp CTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHH
Confidence 4455778889999999999 999999999999999999999999999999 777 7899999988775
No 205
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=95.87 E-value=0.022 Score=52.86 Aligned_cols=50 Identities=18% Similarity=0.125 Sum_probs=42.9
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHH
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLA 281 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lk 281 (296)
...+..+...|..++..|+|..|+..|.+|++.+|+++.+|.++|.||..
T Consensus 244 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~ 293 (472)
T 4g1t_A 244 PGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRA 293 (472)
T ss_dssp SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Confidence 34567788889999999999999999999999999999999999988864
No 206
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=95.87 E-value=0.013 Score=55.83 Aligned_cols=62 Identities=10% Similarity=-0.016 Sum_probs=53.8
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQL--------CPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~--------~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+.+.|..+..+|+|.+|+..|.++|.+ .|.-+..|+|.|..|..+|+|.+|+.-+.+|
T Consensus 328 ~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~A 397 (429)
T 3qwp_A 328 QLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLA 397 (429)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3567778899999999999999999999965 2335689999999999999999999988876
No 207
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=95.85 E-value=0.017 Score=52.16 Aligned_cols=60 Identities=22% Similarity=0.142 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--------CCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 236 DWVKAKGDQMFRDGNYLGAVSAYSHGLQLC--------PNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 236 ~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~--------p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+...|..++..|+|..|+..|.+++.+. |....++.|+|.+|+.+|++.+|+..+.++
T Consensus 94 ~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 161 (373)
T 1hz4_A 94 WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSG 161 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 446788999999999999999999999875 335678899999999999999999888765
No 208
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.66 E-value=0.063 Score=42.25 Aligned_cols=60 Identities=18% Similarity=0.053 Sum_probs=54.4
Q ss_pred ChHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHH----cCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFR----DGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLA----LNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk----~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lk----l~~~~~Ai~D~~~A 295 (296)
.+..+...|..++. .+|+..|+..|.+|.+. .++.+++|.+.+|.. .+++.+|+.-+.+|
T Consensus 56 ~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~A 123 (138)
T 1klx_A 56 SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKA 123 (138)
T ss_dssp CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHH
Confidence 47788999999998 89999999999999987 678999999999999 99999999988775
No 209
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=95.62 E-value=0.025 Score=47.60 Aligned_cols=59 Identities=14% Similarity=-0.004 Sum_probs=44.7
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcC----CHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALN----NLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~----~~~~Ai~D~~~A 295 (296)
++..+...|..++..|++..|+..|.+|++. .++.+++|.+.+|.. + ++.+|+.-+.+|
T Consensus 17 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A 79 (212)
T 3rjv_A 17 DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAEKA 79 (212)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHH
Confidence 4667777888888888888888888888765 467777778887777 6 777777776654
No 210
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=95.43 E-value=0.036 Score=50.21 Aligned_cols=60 Identities=13% Similarity=-0.116 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 236 DWVKAKGDQMFRDGNYLGAVSAYSHGLQLC--PN-LACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 236 ~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~--p~-~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
......|..+-..|++.+|+..|.+++.-. |. .+.+.+++|.|+.++|+..+|+.-+.++
T Consensus 172 ~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a 234 (282)
T 4f3v_A 172 AAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWL 234 (282)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 356677888888888888888888888544 54 4568888999999999988888877664
No 211
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=95.43 E-value=0.039 Score=50.35 Aligned_cols=65 Identities=12% Similarity=-0.029 Sum_probs=55.1
Q ss_pred CCCChHHHHHHHHHH----HHc---CCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHH--HHHHHHHhc
Q psy5819 231 EENNPDWVKAKGDQM----FRD---GNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLH--KAVDDASEV 295 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~----fk~---g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~--~Ai~D~~~A 295 (296)
..++...+..+|..+ ... +++..++.+|.++|..+|.+..++++|+.+...+|.+. +++..|+++
T Consensus 99 nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~ 172 (306)
T 3dra_A 99 NEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKV 172 (306)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHH
Confidence 445567788888888 666 78999999999999999999999999999999999988 888887764
No 212
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=95.43 E-value=0.068 Score=49.38 Aligned_cols=66 Identities=6% Similarity=-0.114 Sum_probs=58.8
Q ss_pred cCCCChHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCC-HHHHHHHHHhc
Q psy5819 230 PEENNPDWVKAKGDQMFRDG--NYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNN-LHKAVDDASEV 295 (296)
Q Consensus 230 ~~~~~~~~lk~~Gn~~fk~g--~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~-~~~Ai~D~~~A 295 (296)
...++...+..+|..+...| +|..++.+|+++|..+|.+..++++|+.+...+|. +.+++..++++
T Consensus 103 ~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~ 171 (331)
T 3dss_A 103 VNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSL 171 (331)
T ss_dssp HCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHH
Confidence 35667889999999999888 59999999999999999999999999999999998 68999888764
No 213
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=95.41 E-value=0.052 Score=50.59 Aligned_cols=65 Identities=2% Similarity=-0.165 Sum_probs=58.8
Q ss_pred CCCChHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHc-C-CHHHHHHHHHhc
Q psy5819 231 EENNPDWVKAKGDQMFRDG-NYLGAVSAYSHGLQLCPNLACLYSNRAAAHLAL-N-NLHKAVDDASEV 295 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g-~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl-~-~~~~Ai~D~~~A 295 (296)
+......+..+|..+...| .+.+|+..++.+|..+|++..++++|..|...+ + ++.+++.-|+++
T Consensus 84 nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~ 151 (349)
T 3q7a_A 84 NPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGS 151 (349)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Confidence 4456788889999999999 599999999999999999999999999999998 8 899999988876
No 214
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=95.31 E-value=0.028 Score=47.34 Aligned_cols=60 Identities=5% Similarity=-0.156 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCC--ChHHHHHHHHHHHH----cCCHHHHHHHHHh
Q psy5819 235 PDWVKAKGDQMFR----DGNYLGAVSAYSHGLQLCPN--LACLYSNRAAAHLA----LNNLHKAVDDASE 294 (296)
Q Consensus 235 ~~~lk~~Gn~~fk----~g~y~~Ai~~Yt~AI~~~p~--~~~ly~NRA~~~lk----l~~~~~Ai~D~~~ 294 (296)
+..+...|..++. .+++..|+..|.+|++..+. ++.+++|.+.+|.. .+++.+|+.-+.+
T Consensus 85 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~ 154 (212)
T 3rjv_A 85 KSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKG 154 (212)
T ss_dssp HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 3344444444443 44445555555554444441 24444444444444 4444444444433
No 215
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=95.30 E-value=0.061 Score=48.39 Aligned_cols=61 Identities=11% Similarity=0.092 Sum_probs=53.7
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-----ChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPN-----LACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~-----~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|..++..|+|..|+..|.+++.+.+. ...+|.++|.++...|++.+|+..+.++
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a 200 (373)
T 1hz4_A 135 EFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRL 200 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 455677899999999999999999999998875 3578999999999999999999888765
No 216
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=95.20 E-value=0.031 Score=54.38 Aligned_cols=58 Identities=19% Similarity=0.087 Sum_probs=48.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhC-----C---CChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 238 VKAKGDQMFRDGNYLGAVSAYSHGLQLC-----P---NLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 238 lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~-----p---~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+.+.+..+..+|+|.+|+..|.++|.+. + .-+..+.|.|.+|..+|+|.+|+.-+.+|
T Consensus 312 ~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~a 377 (490)
T 3n71_A 312 TLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRM 377 (490)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3455666778999999999999999752 2 34589999999999999999999988776
No 217
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=95.18 E-value=0.05 Score=50.03 Aligned_cols=66 Identities=9% Similarity=0.070 Sum_probs=55.8
Q ss_pred eCCEEEEEEEe-CCCCCCcceEEeeccEEEEeec------ce--------EE--eecccCCcccCCceEEeeCCEEEEEE
Q psy5819 13 TPSKVFITVPL-YNVPTHKVDVFTSESYIKLHYG------NY--------IF--EKLLLRPIVEEASRIRLENNEAEFEL 75 (296)
Q Consensus 13 T~~~V~i~V~l-~~~~~~~~~V~~~~~~lkv~~~------~~--------~~--~~~L~~~Id~e~S~~~i~~~~v~i~L 75 (296)
+...+.|.+.| ||+++.+++|.+.++.|.|+.. .| .| .+.|...||++.-++++.+|.|.|+|
T Consensus 231 ~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~dGvL~i~~ 310 (314)
T 2bol_A 231 GSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIVDGLMVVEA 310 (314)
T ss_dssp SCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEEETTEEEEEE
T ss_pred CCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEEeCCEEEEEE
Confidence 44579999999 9999999999999999999862 11 13 56699999999999999999999999
Q ss_pred eec
Q psy5819 76 IKS 78 (296)
Q Consensus 76 ~K~ 78 (296)
.|.
T Consensus 311 Pk~ 313 (314)
T 2bol_A 311 PLF 313 (314)
T ss_dssp EEE
T ss_pred ecC
Confidence 875
No 218
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.84 E-value=0.051 Score=49.70 Aligned_cols=62 Identities=11% Similarity=0.066 Sum_probs=53.6
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC------CChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCP------NLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p------~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+...|..++..|+|.+|+..|.+++.... ..+.+|.+.+.+|+.+|+|.+|...+++|
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 201 (434)
T 4b4t_Q 134 KHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAA 201 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 356677889999999999999999999987632 35689999999999999999999888765
No 219
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=94.68 E-value=0.12 Score=49.28 Aligned_cols=61 Identities=11% Similarity=-0.011 Sum_probs=47.5
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+...+...+. +.+.|++..|...|.+++...|.+..++.+.+..++++|++.+|+.-+.+|
T Consensus 12 ~~~~w~~l~~-~~~~~~~~~a~~~~e~al~~~P~~~~~w~~~~~~~~~~~~~~~a~~~~~ra 72 (530)
T 2ooe_A 12 DLDAWSILIR-EAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRC 72 (530)
T ss_dssp CHHHHHHHHH-HHHSSCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3455555665 467788888888888888888888888888888888888888888777765
No 220
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=94.62 E-value=0.082 Score=50.55 Aligned_cols=61 Identities=11% Similarity=-0.104 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCh-HHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLA-CLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~-~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+..+...|.-+.+.|++..|...|.++|.+.|.++ .+|.+.+.++..+|++.+|+.-+.+|
T Consensus 321 ~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~A 382 (530)
T 2ooe_A 321 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKA 382 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 44444444444455555555555555555555443 34555555555555555555444443
No 221
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.60 E-value=0.096 Score=53.61 Aligned_cols=58 Identities=16% Similarity=0.185 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHh
Q psy5819 237 WVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASE 294 (296)
Q Consensus 237 ~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~ 294 (296)
-|-.++.-+...|+|+-|+.+-.+|+...|..-..|++.|.||+.+|+|+.|+--.+.
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNS 396 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINS 396 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhc
Confidence 5667788888999999999999999999999999999999999999999999876553
No 222
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=94.59 E-value=0.012 Score=56.77 Aligned_cols=52 Identities=21% Similarity=0.323 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 236 DWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 236 ~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+...|+.+|..|.|.+|+.+|+++ ..|.+.|.|+.++|+|.+|++-+.+|
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA 174 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA 174 (449)
T ss_dssp --------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHc
Confidence 36778888888888888888888866 46778888888888888888877765
No 223
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=94.49 E-value=0.089 Score=48.58 Aligned_cols=64 Identities=6% Similarity=0.036 Sum_probs=53.5
Q ss_pred CCChHHHHHHHHHHHHcCC----------HHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCC--HHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGN----------YLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNN--LHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~----------y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~--~~~Ai~D~~~A 295 (296)
+.....+..+|..+...|. |.+++.+++.+|..+|.+..++++|+-+...++. +.+++..|+++
T Consensus 61 P~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~ 136 (331)
T 3dss_A 61 PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARF 136 (331)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHH
Confidence 3445666667766655554 7899999999999999999999999999999994 99999998875
No 224
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.34 E-value=0.079 Score=57.80 Aligned_cols=54 Identities=20% Similarity=0.307 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhcC
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEVR 296 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A~ 296 (296)
...+...|+.++..|+|.+|+.+|++| ..|...|.||.++|+|.+|++-+.+|.
T Consensus 1195 ~ad~~~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA~ 1248 (1630)
T 1xi4_A 1195 NAHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKAN 1248 (1630)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 456678999999999999999999996 589999999999999999999998773
No 225
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=94.30 E-value=0.17 Score=47.49 Aligned_cols=63 Identities=14% Similarity=-0.038 Sum_probs=56.2
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 232 ENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 232 ~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...+..+...|..++..|++.+|+..+.+||.++| +...|.-+|.++.-.|++.+|++.+.+|
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~A 336 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTA 336 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 44577788888888889999999999999999997 4778888999999999999999999876
No 226
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=94.29 E-value=0.061 Score=51.40 Aligned_cols=55 Identities=4% Similarity=-0.052 Sum_probs=45.2
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhh-----CCC---ChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 241 KGDQMFRDGNYLGAVSAYSHGLQL-----CPN---LACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 241 ~Gn~~fk~g~y~~Ai~~Yt~AI~~-----~p~---~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+...-..|+|.+|+..|.++|.+ .|+ -+..|.|.|.+|..+|+|.+|+.-+.+|
T Consensus 304 ~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~a 366 (433)
T 3qww_A 304 EFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKI 366 (433)
T ss_dssp HHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 344444578999999999999975 333 4588999999999999999999988876
No 227
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.10 E-value=0.081 Score=39.28 Aligned_cols=38 Identities=13% Similarity=0.044 Sum_probs=33.9
Q ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q psy5819 231 EENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL 268 (296)
Q Consensus 231 ~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~ 268 (296)
...++..+.-.|+.+|..|+|..||..|.+++..+|..
T Consensus 39 dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 39 EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 34567888899999999999999999999999999974
No 228
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=94.06 E-value=0.084 Score=50.26 Aligned_cols=60 Identities=8% Similarity=-0.063 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-----CC---ChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 236 DWVKAKGDQMFRDGNYLGAVSAYSHGLQLC-----PN---LACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 236 ~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~-----p~---~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+......+..+|+|.+|+..|.++|.+. |+ -+..+.|.|.+|..+|+|.+|+.-|.+|
T Consensus 288 ~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~ 355 (429)
T 3qwp_A 288 QESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRT 355 (429)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 345556677889999999999999999753 23 3589999999999999999999998876
No 229
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.92 E-value=0.1 Score=56.91 Aligned_cols=59 Identities=17% Similarity=0.164 Sum_probs=52.2
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhcC
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEVR 296 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A~ 296 (296)
..+..+...|..+...|+|.+||.+|.+| +++..|.+.+.|+.++|+|.+|+.-+..||
T Consensus 1103 n~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mAr 1161 (1630)
T 1xi4_A 1103 NEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMAR 1161 (1630)
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45778889999999999999999999776 788999999999999999999999887764
No 230
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=93.54 E-value=0.087 Score=47.61 Aligned_cols=59 Identities=8% Similarity=-0.053 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 237 WVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL--ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 237 ~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~--~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.....|..+++.|+|.+|+..|+.++...+.. ..++++.+.++..+|++.+|+..+.+|
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a 197 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEA 197 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 77889999999999999999999888764322 358999999999999999999998876
No 231
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=93.53 E-value=0.11 Score=48.43 Aligned_cols=66 Identities=8% Similarity=-0.125 Sum_probs=57.3
Q ss_pred cCCCChHHHHHHHHHHHHcCCHH--------HHHHHHHHHHhhCCCChHHHHHHHHHHHHcCC-------HHHHHHHHHh
Q psy5819 230 PEENNPDWVKAKGDQMFRDGNYL--------GAVSAYSHGLQLCPNLACLYSNRAAAHLALNN-------LHKAVDDASE 294 (296)
Q Consensus 230 ~~~~~~~~lk~~Gn~~fk~g~y~--------~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~-------~~~Ai~D~~~ 294 (296)
...++...+..+|-.+.+.|.|. .++.+++++|+.+|.+..++++|+.+..+++. +.+++..+.+
T Consensus 154 ~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~ 233 (349)
T 3q7a_A 154 PDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILK 233 (349)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHH
Confidence 34566778888888887777777 99999999999999999999999999999997 7888888876
Q ss_pred c
Q psy5819 295 V 295 (296)
Q Consensus 295 A 295 (296)
|
T Consensus 234 a 234 (349)
T 3q7a_A 234 S 234 (349)
T ss_dssp H
T ss_pred H
Confidence 5
No 232
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=93.42 E-value=0.28 Score=46.28 Aligned_cols=60 Identities=7% Similarity=-0.095 Sum_probs=44.7
Q ss_pred ChHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHH----cCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFR----DGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLA----LNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk----~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lk----l~~~~~Ai~D~~~A 295 (296)
.+..+...|..++. .+++..|+..|.+|++.. ++.+++|.+.+|.. .+++.+|+..+.+|
T Consensus 362 ~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A 429 (490)
T 2xm6_A 362 EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTA 429 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence 45667777777777 778888888888877753 57777788888887 77888887777665
No 233
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=93.35 E-value=0.27 Score=44.98 Aligned_cols=61 Identities=13% Similarity=-0.011 Sum_probs=54.4
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC--CChHHHHHHHHHHHHcCCHHHHHHHHHh
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCP--NLACLYSNRAAAHLALNNLHKAVDDASE 294 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p--~~~~ly~NRA~~~lkl~~~~~Ai~D~~~ 294 (296)
.+..+.-.|..++..|++.+|+..|.++|..+| .+..++.-.+.+|+++|++..|..-+..
T Consensus 99 ~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~ 161 (310)
T 3mv2_B 99 SPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDN 161 (310)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 355667889999999999999999999999997 8899999999999999999999877643
No 234
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=92.86 E-value=0.11 Score=38.07 Aligned_cols=32 Identities=22% Similarity=0.116 Sum_probs=27.7
Q ss_pred hCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 264 LCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 264 ~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+|.++.+++++|.+|+.+|+|.+|+..+.+|
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 33 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEEL 33 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 47899999999999999999999999999876
No 235
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=92.62 E-value=0.21 Score=41.68 Aligned_cols=60 Identities=18% Similarity=-0.035 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---------hHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 236 DWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL---------ACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 236 ~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~---------~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+.+.+..++..|.|..|+-.++.++.+...+ +.++...|.+++..++|..|..-+.+|
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qA 89 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMA 89 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 458999999999999999999999987664322 257888999999999999999988876
No 236
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=92.54 E-value=0.44 Score=44.85 Aligned_cols=59 Identities=14% Similarity=-0.031 Sum_probs=31.7
Q ss_pred hHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHH----cCCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFR----DGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLA----LNNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk----~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lk----l~~~~~Ai~D~~~A 295 (296)
+..+...|..++. .+++..|+..|.+|+.. .++.++++.+.+|.. .+++.+|+..+.+|
T Consensus 75 ~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a 141 (490)
T 2xm6_A 75 TPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--GLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLA 141 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence 4444455555555 55555555555555543 245555555555555 55555555555443
No 237
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=92.52 E-value=0.3 Score=38.21 Aligned_cols=53 Identities=15% Similarity=-0.116 Sum_probs=48.5
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHH----cCCHHHHHHHHHhc
Q psy5819 241 KGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLA----LNNLHKAVDDASEV 295 (296)
Q Consensus 241 ~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lk----l~~~~~Ai~D~~~A 295 (296)
.|.-++..+.+..|+..|.+|.+. .++.+++|.+.+|+. .+++.+|+.-+.+|
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~A 87 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKA 87 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHH
Confidence 888888888999999999999987 688999999999999 89999999988775
No 238
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=92.13 E-value=0.3 Score=46.14 Aligned_cols=61 Identities=7% Similarity=-0.134 Sum_probs=49.9
Q ss_pred hHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHc----CCHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQMFRDG---NYLGAVSAYSHGLQLCPNLACLYSNRAAAHLAL----NNLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g---~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl----~~~~~Ai~D~~~A 295 (296)
+..+...|..++..| ++..|+..|.+|+..++..+..++|.+.+|... +++.+|+.-+.+|
T Consensus 176 ~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~a 243 (452)
T 3e4b_A 176 DICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKI 243 (452)
T ss_dssp TTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 446778888888888 889999999999988888888888888888765 6888888777654
No 239
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=89.33 E-value=1 Score=42.34 Aligned_cols=58 Identities=7% Similarity=-0.119 Sum_probs=41.7
Q ss_pred hHHHHHHHHHH---HHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcC-----CHHHHHHHHHhc
Q psy5819 235 PDWVKAKGDQM---FRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALN-----NLHKAVDDASEV 295 (296)
Q Consensus 235 ~~~lk~~Gn~~---fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~-----~~~~Ai~D~~~A 295 (296)
+..+...|..+ ...|++..|+..|.+|++.. ++.+++|.+.+|. .| ++.+|+.-+.+|
T Consensus 248 ~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~A 313 (452)
T 3e4b_A 248 PASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKA 313 (452)
T ss_dssp THHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHH
Confidence 55666777763 35778888888888877554 6777788888777 44 788887777665
No 240
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=87.66 E-value=0.99 Score=35.76 Aligned_cols=61 Identities=10% Similarity=-0.096 Sum_probs=42.1
Q ss_pred ChHHHHHHHHHHHHcCCHHH---HHHHHHHHHhhC-C-CChHHHHHHHHHHHHcCCHHHHHHHHHh
Q psy5819 234 NPDWVKAKGDQMFRDGNYLG---AVSAYSHGLQLC-P-NLACLYSNRAAAHLALNNLHKAVDDASE 294 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~---Ai~~Yt~AI~~~-p-~~~~ly~NRA~~~lkl~~~~~Ai~D~~~ 294 (296)
++..-.+-|-.+.+..+-.. +|..+...++.+ | ..-.+++..|.+|+++|+|..|+..|+.
T Consensus 34 s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~ 99 (126)
T 1nzn_A 34 SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRG 99 (126)
T ss_dssp CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 34555666666666665544 777777777765 4 3556777788888888888888877764
No 241
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=87.20 E-value=1.7 Score=35.43 Aligned_cols=46 Identities=17% Similarity=0.005 Sum_probs=39.1
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAH 279 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~ 279 (296)
..+.+...|-.+++.|+|..|..++..+|+++|++..+..-+.++-
T Consensus 70 ~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie 115 (152)
T 1pc2_A 70 QRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLID 115 (152)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 3567888999999999999999999999999999887766555544
No 242
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=87.07 E-value=0.76 Score=36.83 Aligned_cols=62 Identities=5% Similarity=-0.156 Sum_probs=51.0
Q ss_pred ChHHHHHHHHHHHHcCC---HHHHHHHHHHHHhhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGN---YLGAVSAYSHGLQLCPN-LACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~---y~~Ai~~Yt~AI~~~p~-~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
++....+-|-.+.+..+ ...+|..+...++.+|. .-.+++..|.+|+++|+|..|...|+.+
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~l 104 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTL 104 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 46667777777777665 46899999999998884 4688888999999999999999988754
No 243
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=86.35 E-value=1.5 Score=41.00 Aligned_cols=49 Identities=10% Similarity=0.049 Sum_probs=42.8
Q ss_pred CChHHHHHHHHHHHHcCC---HHHHHHHHHHHHhhCCCChHHHHHHHHHHHH
Q psy5819 233 NNPDWVKAKGDQMFRDGN---YLGAVSAYSHGLQLCPNLACLYSNRAAAHLA 281 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~---y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lk 281 (296)
..+-.+.-+|..++..++ +..|+.+|.+||+++|+++.+|.-++.||+.
T Consensus 194 ~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~ 245 (372)
T 3ly7_A 194 GALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIV 245 (372)
T ss_dssp GGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 356778889999987665 5899999999999999999999999999974
No 244
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=86.33 E-value=1.9 Score=40.05 Aligned_cols=59 Identities=14% Similarity=0.031 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 237 WVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 237 ~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+...+..++..|+|..|+.....++..+|-+-.+|.-.-.||+..|+..+|+.-|..+
T Consensus 173 a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~ 231 (388)
T 2ff4_A 173 AHTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRV 231 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34556777889999999999999999999999999999999999999999999988765
No 245
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=86.06 E-value=1.1 Score=40.80 Aligned_cols=51 Identities=18% Similarity=0.063 Sum_probs=41.3
Q ss_pred HHHHHHHcC--CHHHHHHHHHHHHhhCCC--ChHHHHHHHHHHHHcCCHHHHHHHHHh
Q psy5819 241 KGDQMFRDG--NYLGAVSAYSHGLQLCPN--LACLYSNRAAAHLALNNLHKAVDDASE 294 (296)
Q Consensus 241 ~Gn~~fk~g--~y~~Ai~~Yt~AI~~~p~--~~~ly~NRA~~~lkl~~~~~Ai~D~~~ 294 (296)
.|...+..| +|.+|+..|.++....|+ ...+++| |++++|+|.+|..++..
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~ 236 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVEL 236 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHH
Confidence 343355556 999999999999988886 4567777 99999999999988753
No 246
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=85.74 E-value=3.3 Score=30.14 Aligned_cols=30 Identities=13% Similarity=0.234 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQL 264 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~ 264 (296)
+..+..+|..+=+.|+|.+|+.+|..||+.
T Consensus 19 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 19 ARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 566778888888999999999999999853
No 247
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=84.61 E-value=2.1 Score=41.02 Aligned_cols=47 Identities=13% Similarity=0.066 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHH
Q psy5819 237 WVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKA 288 (296)
Q Consensus 237 ~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~A 288 (296)
.+...|+.+++.|+|++|+.+|.+|. ++..|.+-+.++..+|+|..|
T Consensus 150 n~~~LA~~L~~Lg~yq~AVea~~KA~-----~~~~Wk~v~~aCv~~~ef~lA 196 (449)
T 1b89_A 150 NFGRLASTLVHLGEYQAAVDGARKAN-----STRTWKEVCFACVDGKEFRLA 196 (449)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHT-----CHHHHHHHHHHHHHTTCHHHH
T ss_pred hHHHHHHHHHHhccHHHHHHHHHHcC-----CchhHHHHHHHHHHcCcHHHH
Confidence 46678999999999999999999992 445555544444444444444
No 248
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=84.53 E-value=1.6 Score=35.42 Aligned_cols=63 Identities=5% Similarity=-0.146 Sum_probs=51.5
Q ss_pred CChHHHHHHHHHHHHcCCH---HHHHHHHHHHHhhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNY---LGAVSAYSHGLQLCPN-LACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y---~~Ai~~Yt~AI~~~p~-~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.++....+-+-.+.+..+- ..+|..+...++.+|. .-.+++..|.+|+++|+|..|...|+..
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~l 103 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTL 103 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4567777788888877754 5899999999998884 5578888999999999999999988753
No 249
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=84.46 E-value=4.2 Score=29.47 Aligned_cols=30 Identities=10% Similarity=0.170 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQL 264 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~ 264 (296)
+..+..+|..+=+.|+|.+|+.+|..||+.
T Consensus 11 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 11 ARKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 556778888888999999999999999853
No 250
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=83.78 E-value=3.5 Score=32.52 Aligned_cols=45 Identities=18% Similarity=0.000 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAH 279 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~ 279 (296)
-+.+...|-.+|+.|+|..|..+....|++.|.+..+..-+.++.
T Consensus 74 Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~ 118 (126)
T 1nzn_A 74 RDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLID 118 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 466888899999999999999999999999999987776655543
No 251
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=82.56 E-value=1.7 Score=39.50 Aligned_cols=62 Identities=16% Similarity=0.028 Sum_probs=53.3
Q ss_pred ChHHHHHHHHHHHHc-----CCHHHHHHHHHHHHhhCCCC-hHHHHHHHHHHHH-cCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRD-----GNYLGAVSAYSHGLQLCPNL-ACLYSNRAAAHLA-LNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~-----g~y~~Ai~~Yt~AI~~~p~~-~~ly~NRA~~~lk-l~~~~~Ai~D~~~A 295 (296)
....+.-.|.-+.+. |+.+.|..+|.+||.++|+. ...++..|.-++. .|++..|..-+.+|
T Consensus 198 ~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kA 266 (301)
T 3u64_A 198 EGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRA 266 (301)
T ss_dssp HHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 456777888888884 99999999999999999974 8888889998888 59999999888776
No 252
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=80.91 E-value=2.2 Score=31.29 Aligned_cols=32 Identities=19% Similarity=0.335 Sum_probs=27.4
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQL 264 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~ 264 (296)
..+..+..+|-.+=..|+|.+|+.+|..||++
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34667888899999999999999999999864
No 253
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=75.45 E-value=4 Score=29.52 Aligned_cols=31 Identities=23% Similarity=0.187 Sum_probs=26.3
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQL 264 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~ 264 (296)
.+..+..+|...=..|+|.+|+.+|..||++
T Consensus 12 ~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 12 KGIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4667778888888999999999999999864
No 254
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=75.26 E-value=8.9 Score=37.09 Aligned_cols=59 Identities=19% Similarity=0.078 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 237 WVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 237 ~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.|...|+-.--.+.+..|...|.+|+.++|.+...|+..|..+...|++-.|+-.|.++
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rs 212 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRS 212 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHH
Confidence 45677888877788999999999999999999999999999999999999998877664
No 255
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=75.13 E-value=4.1 Score=30.25 Aligned_cols=31 Identities=16% Similarity=0.302 Sum_probs=26.2
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQL 264 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~ 264 (296)
.+..+..+|..+=+.|+|.+|+.+|..||++
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 3566778888888999999999999999864
No 256
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=73.85 E-value=2.4 Score=39.98 Aligned_cols=60 Identities=12% Similarity=-0.028 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC---ChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 236 DWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPN---LACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 236 ~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~---~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
..+...|.-+++.|+|..|+.+|.++...+.. ...++.+...+++..++|..|.....+|
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka 194 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAV 194 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 34678999999999999999999999876543 4588888999999999999998887765
No 257
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=73.01 E-value=6.4 Score=28.04 Aligned_cols=30 Identities=17% Similarity=0.489 Sum_probs=27.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q psy5819 239 KAKGDQMFRDGNYLGAVSAYSHGLQLCPNL 268 (296)
Q Consensus 239 k~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~ 268 (296)
...|..++..|++.+|+.+|.+||..+|.=
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP 50 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQP 50 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 568999999999999999999999999863
No 258
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=71.59 E-value=4.7 Score=31.33 Aligned_cols=31 Identities=29% Similarity=0.361 Sum_probs=25.5
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQL 264 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~ 264 (296)
.+..+..+|..+=..|+|.+|+.+|..||++
T Consensus 17 kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 17 KAIDLASKAAQEDKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 3566777888888899999999999999864
No 259
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=70.82 E-value=9.6 Score=35.76 Aligned_cols=57 Identities=21% Similarity=0.096 Sum_probs=47.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCC------ChHHHHHHHHHHHHcCCHHHHHHHHHhcC
Q psy5819 240 AKGDQMFRDGNYLGAVSAYSHGLQLCPN------LACLYSNRAAAHLALNNLHKAVDDASEVR 296 (296)
Q Consensus 240 ~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~------~~~ly~NRA~~~lkl~~~~~Ai~D~~~A~ 296 (296)
..|.-+|..|+|..|+..|++.++-... ...+|...+..|..++|+.++-.-++.|+
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~ 166 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSAR 166 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 5688999999999999999999875432 34788999999999999999987777653
No 260
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=70.50 E-value=7.1 Score=39.23 Aligned_cols=62 Identities=11% Similarity=-0.022 Sum_probs=52.7
Q ss_pred ChHHHHHHHHHHHHcCCHHHHH-HHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAV-SAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai-~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+..+..-|.-+...|+...|+ ..|.+|+..+|.+..++...|......|++..|..-+.++
T Consensus 342 ~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~ 404 (679)
T 4e6h_A 342 APEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSC 404 (679)
T ss_dssp CHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4566666677677888888998 9999999999999999999999999999998887666554
No 261
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=69.88 E-value=13 Score=29.54 Aligned_cols=46 Identities=9% Similarity=-0.089 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHH
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHL 280 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~l 280 (296)
-+-+.-.|-.+++.|+|..|..+-...|++.|++..+..-+.++--
T Consensus 78 Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie~ 123 (134)
T 3o48_A 78 RECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVED 123 (134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Confidence 4667888999999999999999999999999999877666655443
No 262
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=68.50 E-value=17 Score=30.28 Aligned_cols=60 Identities=8% Similarity=-0.084 Sum_probs=42.3
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC--------CChHH-------------HHHHHHHHHHcCCHHHHHHHH
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCP--------NLACL-------------YSNRAAAHLALNNLHKAVDDA 292 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p--------~~~~l-------------y~NRA~~~lkl~~~~~Ai~D~ 292 (296)
+...++..|..++..|++.-|..||.++=..+. .+..- ++-.-.|++-+|++.+|+.-+
T Consensus 33 ~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~iA~~~g~~n~af~~~l~lGdv~~~i~lL 112 (177)
T 3mkq_B 33 DSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSMLLNTFYNNSTKERSSIF 112 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHHHCccHHHHHHHHHHcCCHHHHHHHH
Confidence 467899999999999999999999987632211 12111 222346778888888888754
Q ss_pred H
Q psy5819 293 S 293 (296)
Q Consensus 293 ~ 293 (296)
.
T Consensus 113 ~ 113 (177)
T 3mkq_B 113 A 113 (177)
T ss_dssp H
T ss_pred H
Confidence 3
No 263
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=66.98 E-value=17 Score=29.31 Aligned_cols=46 Identities=9% Similarity=-0.058 Sum_probs=38.3
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHH
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAH 279 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~ 279 (296)
.-+-+.-.|-.+|+.|+|..|..+....|+..|.+..+..-+.++-
T Consensus 76 ~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie 121 (144)
T 1y8m_A 76 RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVE 121 (144)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 3467888899999999999999999999999999876666555443
No 264
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=66.14 E-value=12 Score=27.88 Aligned_cols=34 Identities=24% Similarity=0.414 Sum_probs=29.4
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCP 266 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p 266 (296)
..+..+...|.++|+.|+|.+|+..+.++..+..
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~te 84 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLSD 84 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcccc
Confidence 3467788999999999999999999999986654
No 265
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=64.60 E-value=12 Score=37.37 Aligned_cols=50 Identities=14% Similarity=0.098 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCC
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNN 284 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~ 284 (296)
+..+..+|..+|..|+|.-|....+.++..+|++..+..-+|.||-+||-
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~ 498 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGY 498 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 56788899999999999999999999999999999999999999988874
No 266
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=62.77 E-value=7.7 Score=28.99 Aligned_cols=29 Identities=17% Similarity=0.306 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQ 263 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~ 263 (296)
|-..--+++.+.+.|.|++||.++.+|..
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 44455678899999999999998877763
No 267
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=62.74 E-value=10 Score=34.31 Aligned_cols=46 Identities=15% Similarity=0.125 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHhhCCC--ChHHHHHHHHHHHHc-----CCHHHHHHHHHhcC
Q psy5819 251 YLGAVSAYSHGLQLCPN--LACLYSNRAAAHLAL-----NNLHKAVDDASEVR 296 (296)
Q Consensus 251 y~~Ai~~Yt~AI~~~p~--~~~ly~NRA~~~lkl-----~~~~~Ai~D~~~A~ 296 (296)
...|.....+||+++|. +..+|.-.+..|.++ |+..+|...+.+|+
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL 231 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLT 231 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHH
Confidence 47889999999999999 778999999999996 99999999988873
No 268
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=60.98 E-value=7 Score=29.31 Aligned_cols=29 Identities=17% Similarity=0.532 Sum_probs=26.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q psy5819 239 KAKGDQMFRDGNYLGAVSAYSHGLQLCPN 267 (296)
Q Consensus 239 k~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~ 267 (296)
...|..++..|++..|+.+|..||..+|.
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 46799999999999999999999998885
No 269
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=53.03 E-value=9.6 Score=27.44 Aligned_cols=27 Identities=22% Similarity=0.111 Sum_probs=23.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy5819 238 VKAKGDQMFRDGNYLGAVSAYSHGLQL 264 (296)
Q Consensus 238 lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~ 264 (296)
....|.++...|||+.|+.+|+.+|..
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 345788999999999999999999853
No 270
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=43.57 E-value=94 Score=28.38 Aligned_cols=58 Identities=16% Similarity=0.117 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC----------------------ChHHHHHHHHHHHHcCCHHHHHHHHHh
Q psy5819 237 WVKAKGDQMFRDGNYLGAVSAYSHGLQLCPN----------------------LACLYSNRAAAHLALNNLHKAVDDASE 294 (296)
Q Consensus 237 ~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~----------------------~~~ly~NRA~~~lkl~~~~~Ai~D~~~ 294 (296)
.+...|......|+...|+..|.+|+.+-.. ...+...++.+++.+|++..|+..+..
T Consensus 117 ~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~ 196 (388)
T 2ff4_A 117 AEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEA 196 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 3455666777788999999999999876321 114555678889999999999988765
No 271
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=42.25 E-value=83 Score=30.60 Aligned_cols=62 Identities=18% Similarity=0.050 Sum_probs=42.5
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHh--------hCCCChHHHH------------H-HHHHHHHcCCHHHHHHH
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQ--------LCPNLACLYS------------N-RAAAHLALNNLHKAVDD 291 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~--------~~p~~~~ly~------------N-RA~~~lkl~~~~~Ai~D 291 (296)
.++..++..|..+.+.|+++.|+.+|.++=. ....+...+. | .-.||+++|++.+|++-
T Consensus 679 ~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~ 758 (814)
T 3mkq_A 679 SAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDL 758 (814)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHH
T ss_pred CcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHH
Confidence 3467889999999999999999999998621 1112221111 1 23478888888888876
Q ss_pred HHh
Q psy5819 292 ASE 294 (296)
Q Consensus 292 ~~~ 294 (296)
|..
T Consensus 759 ~~~ 761 (814)
T 3mkq_A 759 LIK 761 (814)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 272
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=40.35 E-value=5.9 Score=35.09 Aligned_cols=35 Identities=20% Similarity=0.396 Sum_probs=0.0
Q ss_pred cCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy5819 230 PEENNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQL 264 (296)
Q Consensus 230 ~~~~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~ 264 (296)
|....|..+..+|-++=+.|+|.+|+.+|..||.+
T Consensus 18 p~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~ 52 (257)
T 2ymb_A 18 PQSTAAATVLKRAVELDSESRYPQALVCYQEGIDL 52 (257)
T ss_dssp -----------------------------------
T ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34556778888999999999999999999999864
No 273
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=37.63 E-value=83 Score=26.22 Aligned_cols=36 Identities=14% Similarity=0.183 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChH
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLAC 270 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ 270 (296)
...+.=.|.-++-+++|.+|-..++.|++.+|....
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~ 49 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQ 49 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHH
Confidence 456677899999999999999999999999997653
No 274
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=36.57 E-value=1e+02 Score=26.53 Aligned_cols=50 Identities=8% Similarity=-0.060 Sum_probs=37.3
Q ss_pred HHcCCHHHHHHHHHHHHhh-----CCC---ChHHHHHHHHHHHH-cCCHHHHHHHHHhc
Q psy5819 246 FRDGNYLGAVSAYSHGLQL-----CPN---LACLYSNRAAAHLA-LNNLHKAVDDASEV 295 (296)
Q Consensus 246 fk~g~y~~Ai~~Yt~AI~~-----~p~---~~~ly~NRA~~~lk-l~~~~~Ai~D~~~A 295 (296)
|..|+-..|..+|..|+.+ .|. .-.+.+|-|..|+. ++++.+|+.-+.+|
T Consensus 136 ~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~A 194 (227)
T 2o8p_A 136 FGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSL 194 (227)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHH
T ss_pred HccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 4566678899999998864 333 44888899988885 88899998766654
No 275
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=36.25 E-value=1.4e+02 Score=24.13 Aligned_cols=59 Identities=7% Similarity=0.045 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------hHHHHH-HHH--HHHHcCCHHHHHHHHHhc
Q psy5819 237 WVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNL------ACLYSN-RAA--AHLALNNLHKAVDDASEV 295 (296)
Q Consensus 237 ~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~------~~ly~N-RA~--~~lkl~~~~~Ai~D~~~A 295 (296)
.-...|-.+|..|+|-+|-+.+..+-...+.. ...+.. .|+ .|+..||+..|..-+.+|
T Consensus 34 ~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~A 101 (161)
T 2ijq_A 34 RAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTS 101 (161)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 34668999999999999999999988776543 233344 444 445679999998877765
No 276
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=35.83 E-value=1.3e+02 Score=29.89 Aligned_cols=63 Identities=5% Similarity=-0.077 Sum_probs=51.8
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCC---HHHHHHHHHhc
Q psy5819 233 NNPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNN---LHKAVDDASEV 295 (296)
Q Consensus 233 ~~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~---~~~Ai~D~~~A 295 (296)
.+...+..-.+.+-+.|++..|-..|.+++...|....++..=+..-+++++ +..+..-+.+|
T Consensus 64 ~d~~~W~~yi~~~~~~~~~~~aR~vyEraL~~fP~~~~lW~~Yi~~E~~~~~~~~~~~v~~lfeRa 129 (679)
T 4e6h_A 64 TDIFLYVKLLKHHVSLKQWKQVYETFDKLHDRFPLMANIWCMRLSLEFDKMEELDAAVIEPVLARC 129 (679)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTC--CCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCcchHHHHHHHHHHH
Confidence 3456666677777788999999999999999999999999998888888998 88888877765
No 277
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=39.31 E-value=9.1 Score=38.45 Aligned_cols=52 Identities=21% Similarity=0.050 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHH
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLH 286 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~ 286 (296)
+..+..+|..+|..|+|+-|....+.++..+|++..+..-+|.+|-+||--.
T Consensus 461 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~ 512 (668)
T 2yhe_A 461 ADAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQT 512 (668)
Confidence 4667889999999999999999999999999999988888999998888543
No 278
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=31.81 E-value=1.6e+02 Score=24.84 Aligned_cols=49 Identities=12% Similarity=0.070 Sum_probs=34.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHH
Q psy5819 240 AKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDAS 293 (296)
Q Consensus 240 ~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~ 293 (296)
--|-.+|-.|.|..|+-... +-+-++..+-.++||.++++|..|+.-.+
T Consensus 38 L~~I~LyyngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy~klKdYkkA~~~le 86 (242)
T 3kae_A 38 LMSIVLYLNGEYTRALFHLH-----KLNTCTSKYYESLCYKKKKDYKKAIKSLE 86 (242)
T ss_dssp HHHHHHHHTTCHHHHHHHHH-----TCCBHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hhhhhhhhcchHhHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667777787766654321 22345556669999999999999987654
No 279
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=31.77 E-value=87 Score=32.46 Aligned_cols=52 Identities=13% Similarity=-0.014 Sum_probs=40.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 240 AKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 240 ~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.-...++..|.|.-|. .-+...|.++..-+-+|.||+.+|++++|...+.+|
T Consensus 815 ~l~~~L~~~~~~~~a~----eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kA 866 (950)
T 4gq2_M 815 ELVEKLFLFKQYNACM----QLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTT 866 (950)
T ss_dssp HHHHHHHHTTCHHHHH----HHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHHHHhcHHHHHH----HHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3566777788876553 345677778766677999999999999999998876
No 280
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=27.25 E-value=0.32 Score=47.66 Aligned_cols=54 Identities=22% Similarity=0.330 Sum_probs=43.6
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+...+..-|+.+|..|.|..|.-.|+.. + =|...|.|+.+||+|+.|++.+.+|
T Consensus 143 N~A~iq~VGDrcf~e~lYeAAKilys~i----s----N~akLAstLV~L~~yq~AVdaArKA 196 (624)
T 3lvg_A 143 NNAHIQQVGDRCYDEKMYDAAKLLYNNV----S----NFGRLASTLVHLGEYQAAVDGARKA 196 (624)
T ss_dssp SSSCTHHHHHHHHHSCCSTTSSTTGGGS----C----CCTTTSSSSSSCSGGGSSTTTTTTC
T ss_pred CcccHHHHHHHHHHccCHHHHHHHHHhC----c----cHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3456788999999999999999888743 2 2346889999999999998877665
No 281
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=27.07 E-value=74 Score=24.96 Aligned_cols=30 Identities=10% Similarity=0.306 Sum_probs=25.9
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHGLQ 263 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~ 263 (296)
.+..+...|.+++..||..+|-++|=+|..
T Consensus 6 lAe~yL~EA~ell~kGD~vQAsEK~ykAae 35 (129)
T 2jpu_A 6 SAEVYYEEAEEFLSKGDLVQACEKYYKAAE 35 (129)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 478899999999999999999988877664
No 282
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=26.68 E-value=74 Score=23.65 Aligned_cols=28 Identities=29% Similarity=0.236 Sum_probs=22.7
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 268 LACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 268 ~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
.+-.|..||..+++-|.|++||..-.+|
T Consensus 14 ~AH~~~RrAe~ll~~gkydeAIech~kA 41 (97)
T 2crb_A 14 LAHQQSRRADRLLAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhHhhhHHHHHHhcCCHHHHHHHHHHH
Confidence 3567888999999999999999765443
No 283
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=26.66 E-value=2.3e+02 Score=26.69 Aligned_cols=59 Identities=10% Similarity=-0.104 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHH
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPN-LACLYSNRAAAHLALNNLHKAVDDAS 293 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~-~~~ly~NRA~~~lkl~~~~~Ai~D~~ 293 (296)
...+...-..+.+.|++..|...|....+..-. +...|.-.-.+|.+.|++.+|..-+.
T Consensus 140 ~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~ 199 (501)
T 4g26_A 140 LRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQ 199 (501)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHH
Confidence 344555556667777777777777776654321 55667777777777777777766544
No 284
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=25.46 E-value=1.2e+02 Score=28.21 Aligned_cols=28 Identities=21% Similarity=0.033 Sum_probs=23.3
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 268 LACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 268 ~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...++.-+|-+||-+++|.+|+..|..+
T Consensus 189 k~aa~allarvyL~~~~~~~A~~~a~~v 216 (454)
T 3myv_A 189 KYAARALLARIYLYHDDNRKAFDLADQL 216 (454)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 3467778889999999999999988765
No 285
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=25.45 E-value=1.5e+02 Score=25.51 Aligned_cols=44 Identities=23% Similarity=0.160 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHh-----hCCCCh---HHHHHHHHHHHH-cCCHHHHHHHHHhc
Q psy5819 252 LGAVSAYSHGLQ-----LCPNLA---CLYSNRAAAHLA-LNNLHKAVDDASEV 295 (296)
Q Consensus 252 ~~Ai~~Yt~AI~-----~~p~~~---~ly~NRA~~~lk-l~~~~~Ai~D~~~A 295 (296)
..|..+|..|+. +.|.+| .+.+|-|.-|+. ++++.+|+.-+.+|
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~a 199 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAA 199 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 467777887774 456555 677788887776 89999998766654
No 286
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=25.41 E-value=1.4e+02 Score=26.16 Aligned_cols=44 Identities=30% Similarity=0.293 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhh----CCCCh---HHHHHHHHHHHH-cCCHHHHHHHHHhc
Q psy5819 252 LGAVSAYSHGLQL----CPNLA---CLYSNRAAAHLA-LNNLHKAVDDASEV 295 (296)
Q Consensus 252 ~~Ai~~Yt~AI~~----~p~~~---~ly~NRA~~~lk-l~~~~~Ai~D~~~A 295 (296)
..|..+|..|+.+ .|.+| .+.+|-|.-|+. ++++.+|+.-+.+|
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~A 224 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEA 224 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 5778888888864 44444 677888887776 89999998876654
No 287
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=23.44 E-value=2.9e+02 Score=22.59 Aligned_cols=50 Identities=18% Similarity=0.002 Sum_probs=38.7
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 241 KGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 241 ~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
+=+-....|++..|...-... ++...|...|...+..|++.-|..-+.++
T Consensus 11 rF~LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 11 RFDLALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 334567899999998875433 57788999999999999988888777654
No 288
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=23.34 E-value=3.3e+02 Score=25.55 Aligned_cols=60 Identities=7% Similarity=-0.122 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC-CChHHHHHHHHHHHHcCCHHHHHHHHHh
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCP-NLACLYSNRAAAHLALNNLHKAVDDASE 294 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p-~~~~ly~NRA~~~lkl~~~~~Ai~D~~~ 294 (296)
...+-..-+.+.+.|++..|+..|.+.....- -+...|+-.-.+|.+.|++.+|..-+..
T Consensus 105 ~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~ 165 (501)
T 4g26_A 105 EATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAH 165 (501)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHH
Confidence 45677777889999999999999999876532 2678888888999999999999876543
No 289
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=22.66 E-value=1.4e+02 Score=27.92 Aligned_cols=28 Identities=11% Similarity=-0.043 Sum_probs=22.9
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 268 LACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 268 ~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...++.-+|-+||-+|+|.+|+..|..+
T Consensus 195 k~aa~allArvyL~~~~~~~A~~~a~~v 222 (461)
T 3kez_A 195 RWAAMTLLSRVYLYKGEYNEALTMAENA 222 (461)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 3467777888999999999999888765
No 290
>3dza_A Uncharacterized putative membrane protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=22.21 E-value=1.1e+02 Score=25.53 Aligned_cols=59 Identities=12% Similarity=0.107 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHH-Hhh------CC-CChHHHHHHHHHHHHcCCHHHHHHHHHh
Q psy5819 236 DWVKAKGDQMFRDGNYLGAVSAYSHG-LQL------CP-NLACLYSNRAAAHLALNNLHKAVDDASE 294 (296)
Q Consensus 236 ~~lk~~Gn~~fk~g~y~~Ai~~Yt~A-I~~------~p-~~~~ly~NRA~~~lkl~~~~~Ai~D~~~ 294 (296)
......+|..++.|+-.+|+....-| +.+ -| ....-..+||..++..|+|.+|-.-...
T Consensus 109 ~aAI~~AN~~Lk~Gd~~~A~~~LklAgvdv~~~~allPL~qT~~~V~~A~~ll~~gk~yeAn~aLk~ 175 (191)
T 3dza_A 109 ESAIQSANEKLAKGDQKGAIDTLRLAGIGVIENQYLMPLNQTRKAVAQSQELLKAGKYYEANLVLKG 175 (191)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTTCEEEEEEEEEEHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHcCCchhhhhhhCChHhHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 34567899999999999998876554 111 11 1236778999999999999998654443
No 291
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=22.15 E-value=1.6e+02 Score=27.58 Aligned_cols=38 Identities=11% Similarity=0.035 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCChHHHH
Q psy5819 235 PDWVKAKGDQMFRDGNYLGAVSAYSHGLQLCPNLACLYS 273 (296)
Q Consensus 235 ~~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~ 273 (296)
+..+..-+.-+...|+...|...|.+||.. |.+..++.
T Consensus 213 ~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~ 250 (493)
T 2uy1_A 213 EEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSL 250 (493)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHH
Confidence 334444444445566666666666666666 66555544
No 292
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=22.14 E-value=1.9e+02 Score=25.39 Aligned_cols=44 Identities=23% Similarity=0.238 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHh-----hCCCCh---HHHHHHHHHHHH-cCCHHHHHHHHHhc
Q psy5819 252 LGAVSAYSHGLQ-----LCPNLA---CLYSNRAAAHLA-LNNLHKAVDDASEV 295 (296)
Q Consensus 252 ~~Ai~~Yt~AI~-----~~p~~~---~ly~NRA~~~lk-l~~~~~Ai~D~~~A 295 (296)
..|..+|..|+. +.|.+| .+.+|-|.-|+. ++++.+|+.-+.+|
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~A 204 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQA 204 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 467778888774 456555 677888887776 78888888766554
No 293
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=22.13 E-value=1.2e+02 Score=32.04 Aligned_cols=50 Identities=14% Similarity=-0.008 Sum_probs=37.1
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCCChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 242 GDQMFRDGNYLGAVSAYSHGLQLCPNLACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 242 Gn~~fk~g~y~~Ai~~Yt~AI~~~p~~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...++..|.|..|.. .+...+.++..-+-+|.||+.+|++++|...+.+|
T Consensus 819 ~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~ka 868 (1139)
T 4fhn_B 819 VEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTT 868 (1139)
T ss_dssp HHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 344556666655433 34567777777778999999999999999988775
No 294
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=22.04 E-value=1.3e+02 Score=28.06 Aligned_cols=28 Identities=21% Similarity=0.195 Sum_probs=23.1
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHhc
Q psy5819 268 LACLYSNRAAAHLALNNLHKAVDDASEV 295 (296)
Q Consensus 268 ~~~ly~NRA~~~lkl~~~~~Ai~D~~~A 295 (296)
...++.-+|-+||-+++|.+|+..|..+
T Consensus 201 k~aa~allarvyL~~~~~~~A~~~a~~v 228 (477)
T 3mcx_A 201 YWAAQALLSRVYLNMGEYQKAYDAATDV 228 (477)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3467777888999999999999988765
No 295
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=20.91 E-value=1.3e+02 Score=21.87 Aligned_cols=28 Identities=4% Similarity=0.036 Sum_probs=22.7
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHG 261 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~A 261 (296)
.+..+.+-|.-++..||+..|+.+++=|
T Consensus 38 mA~~Y~~Da~~fl~kGD~v~Ala~isYa 65 (87)
T 2pmr_A 38 RALNYRDDSVYYLEKGDHITSFGCITYA 65 (87)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3566777888899999999999887754
No 296
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=20.77 E-value=1.3e+02 Score=21.80 Aligned_cols=28 Identities=11% Similarity=0.145 Sum_probs=23.0
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy5819 234 NPDWVKAKGDQMFRDGNYLGAVSAYSHG 261 (296)
Q Consensus 234 ~~~~lk~~Gn~~fk~g~y~~Ai~~Yt~A 261 (296)
.+..+.+-|.-++..||+..|+.+++=|
T Consensus 34 mA~~Y~~Da~~fl~kGD~v~Ala~isYa 61 (86)
T 2oo2_A 34 NIEAYISDSRYFLEKGDLVRAFECVVWA 61 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3667778899999999999999988755
No 297
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=20.06 E-value=2.6e+02 Score=25.88 Aligned_cols=60 Identities=12% Similarity=-0.019 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC----CC---ChHHHHHHHHHHH-HcCCHHHHHHHHHhc
Q psy5819 236 DWVKAKGDQMFRDGNYLGAVSAYSHGLQLC----PN---LACLYSNRAAAHL-ALNNLHKAVDDASEV 295 (296)
Q Consensus 236 ~~lk~~Gn~~fk~g~y~~Ai~~Yt~AI~~~----p~---~~~ly~NRA~~~l-kl~~~~~Ai~D~~~A 295 (296)
+-+.....-++..||+..|-.+|++|.... +. .+.+..--|..|+ ..++|..|..++-.|
T Consensus 140 ev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~ea 207 (394)
T 3txn_A 140 EVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEA 207 (394)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHH
Confidence 344556677889999999999999997543 11 3466667788889 899999998887543
No 298
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=20.02 E-value=2.2e+02 Score=24.71 Aligned_cols=44 Identities=20% Similarity=0.124 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHh-----hCCCCh---HHHHHHHHHHHH-cCCHHHHHHHHHhc
Q psy5819 252 LGAVSAYSHGLQ-----LCPNLA---CLYSNRAAAHLA-LNNLHKAVDDASEV 295 (296)
Q Consensus 252 ~~Ai~~Yt~AI~-----~~p~~~---~ly~NRA~~~lk-l~~~~~Ai~D~~~A 295 (296)
..|..+|..|+. +.|.+| .+.+|-|.-|+. ++++.+|+.-+.+|
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~A 200 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTA 200 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 567777877764 455555 667777777776 78888888766554
Done!