BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5823
(444 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|195380361|ref|XP_002048939.1| GJ21319 [Drosophila virilis]
gi|194143736|gb|EDW60132.1| GJ21319 [Drosophila virilis]
Length = 80
Score = 107 bits (266), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/72 (69%), Positives = 64/72 (88%), Gaps = 1/72 (1%)
Query: 374 ELVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLRE-GLAPQCEALKNTFFECKRSLL 432
+L D++ACAG RADLK+CLLE+DC ++DRKTPRQCL++ + P+C+ L+NTF+ECKRSLL
Sbjct: 9 KLADETACAGVRADLKMCLLESDCCRLDRKTPRQCLQDNNVPPECQVLRNTFYECKRSLL 68
Query: 433 DNRTRFRGHKGY 444
DNR RFRGHKGY
Sbjct: 69 DNRQRFRGHKGY 80
>gi|193713718|ref|XP_001949510.1| PREDICTED: hypothetical protein LOC100161166 [Acyrthosiphon pisum]
Length = 590
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 60/94 (63%), Gaps = 8/94 (8%)
Query: 264 VIKPVKSPSPPPVAAADEYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL 323
VI PV +PPP DE QVWICP C DDGS PMIGCDGCD WYHWVCVG+
Sbjct: 503 VIPPVNE-TPPPAFYFDEA----GNQVWICPMCTKPDDGS-PMIGCDGCDVWYHWVCVGI 556
Query: 324 VAEPETSDWFCPKCSKVDEGSRKEKKKRGRKKKT 357
P+ + WFCP+C + + +++ K KRGR +K
Sbjct: 557 QCPPDCAVWFCPRC--LAKRAQQPKGKRGRPRKN 588
>gi|270015055|gb|EFA11503.1| hypothetical protein TcasGA2_TC014217 [Tribolium castaneum]
Length = 865
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 50/76 (65%), Gaps = 7/76 (9%)
Query: 263 IVIKPVKSPSPPPVAAADEYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVG 322
IV P+ P+PP Y D +VWICP CG QDDGS PMIGCDGCDAWYHWVCVG
Sbjct: 770 IVDVPIVPPAPP-----SRYIDADGNEVWICPGCGSQDDGS-PMIGCDGCDAWYHWVCVG 823
Query: 323 LVAEPETS-DWFCPKC 337
+ P+ S DW+C C
Sbjct: 824 IQVPPDDSEDWYCRHC 839
>gi|357614210|gb|EHJ68964.1| hypothetical protein KGM_12107 [Danaus plexippus]
Length = 81
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 368 FERDPSELVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAP-QCEALKNTFFE 426
F D LVD S CAG RADLKLCLL +DC + +KTPR+CL++GL P +C L+ +FFE
Sbjct: 4 FGPDEVGLVDTSPCAGIRADLKLCLLNSDCCKEHKKTPRECLKDGLVPNECLQLRQSFFE 63
Query: 427 CKRSLLDNRTRFRGHKGY 444
CKRSLLDNR RFRGHKGY
Sbjct: 64 CKRSLLDNRRRFRGHKGY 81
>gi|328700739|ref|XP_001945181.2| PREDICTED: hypothetical protein LOC100167514 [Acyrthosiphon pisum]
Length = 906
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 52/75 (69%), Gaps = 7/75 (9%)
Query: 283 DTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCS--KV 340
D G+ QVWICP CG QDDGS PM+GCDGCDAWYHWVCVG+ P+ + W+CP C +
Sbjct: 827 DAGN--QVWICPTCGKQDDGS-PMVGCDGCDAWYHWVCVGIQCPPDCAVWYCPTCLLKRA 883
Query: 341 DEGSRK--EKKKRGR 353
+ G EK KRGR
Sbjct: 884 ERGVTAPVEKAKRGR 898
>gi|195149688|ref|XP_002015788.1| GL10830 [Drosophila persimilis]
gi|198456467|ref|XP_002138246.1| GA24504 [Drosophila pseudoobscura pseudoobscura]
gi|194109635|gb|EDW31678.1| GL10830 [Drosophila persimilis]
gi|198135625|gb|EDY68804.1| GA24504 [Drosophila pseudoobscura pseudoobscura]
Length = 80
Score = 104 bits (259), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/72 (69%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
Query: 374 ELVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLRE-GLAPQCEALKNTFFECKRSLL 432
+L D++ACAG RADLK+CLLE+DC +VDRKTPRQCL + + P+C+ L+NTF+ECKRSLL
Sbjct: 9 KLADETACAGVRADLKMCLLESDCCRVDRKTPRQCLMDNNVPPECQVLRNTFYECKRSLL 68
Query: 433 DNRTRFRGHKGY 444
DNR RFRG KGY
Sbjct: 69 DNRQRFRGRKGY 80
>gi|193671822|ref|XP_001951331.1| PREDICTED: uncharacterized protein C2orf64 homolog [Acyrthosiphon
pisum]
Length = 79
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 371 DPSELVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLRE-GLAPQCEALKNTFFECKR 429
D EL D CAG RADLK+CLLE+DC +++RK P+ CL+E P+C AL+NTFFECKR
Sbjct: 5 DEGELTDHRPCAGVRADLKMCLLESDCCKIERKLPKDCLKEKNCPPECLALQNTFFECKR 64
Query: 430 SLLDNRTRFRGHKGY 444
SLLDNR RFRG KGY
Sbjct: 65 SLLDNRQRFRGRKGY 79
>gi|118793122|ref|XP_320694.3| AGAP011820-PA [Anopheles gambiae str. PEST]
gi|116117227|gb|EAA00792.3| AGAP011820-PA [Anopheles gambiae str. PEST]
Length = 82
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 60/74 (81%), Gaps = 3/74 (4%)
Query: 374 ELVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLR--EGLAP-QCEALKNTFFECKRS 430
EL DKSACAG RADLK+CLL++DC + ++KTPR+CL +G P +C L+NTFFECKRS
Sbjct: 9 ELADKSACAGVRADLKMCLLQSDCCKKEKKTPRECLNRTDGSVPSECFVLRNTFFECKRS 68
Query: 431 LLDNRTRFRGHKGY 444
+LDNR RFRG KGY
Sbjct: 69 MLDNRQRFRGRKGY 82
>gi|194754419|ref|XP_001959492.1| GF12904 [Drosophila ananassae]
gi|190620790|gb|EDV36314.1| GF12904 [Drosophila ananassae]
Length = 80
Score = 101 bits (251), Expect = 9e-19, Method: Composition-based stats.
Identities = 46/71 (64%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
Query: 375 LVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLR-EGLAPQCEALKNTFFECKRSLLD 433
L D++ACAG RADLK+CLLE+DC ++ + TPRQCL+ + P+C+ L+NTF+ECKRSLLD
Sbjct: 10 LADETACAGVRADLKMCLLESDCCRIAKNTPRQCLQANNVPPECQVLRNTFYECKRSLLD 69
Query: 434 NRTRFRGHKGY 444
NR RFRG KGY
Sbjct: 70 NRQRFRGRKGY 80
>gi|195058006|ref|XP_001995367.1| GH23123 [Drosophila grimshawi]
gi|193899573|gb|EDV98439.1| GH23123 [Drosophila grimshawi]
Length = 80
Score = 100 bits (250), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/72 (65%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
Query: 374 ELVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLRE-GLAPQCEALKNTFFECKRSLL 432
+L D ++CAG RADLK+CLLE++C ++D+KTPRQCL++ + P+C+ L+NTF+ECKRSLL
Sbjct: 9 KLADVTSCAGVRADLKMCLLESECCRLDKKTPRQCLQDNSVPPECQVLRNTFYECKRSLL 68
Query: 433 DNRTRFRGHKGY 444
DNR RFRGHKGY
Sbjct: 69 DNRQRFRGHKGY 80
>gi|189233756|ref|XP_001814148.1| PREDICTED: similar to bip2 CG2009-PA [Tribolium castaneum]
Length = 872
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 41/54 (75%), Gaps = 2/54 (3%)
Query: 285 GDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETS-DWFCPKC 337
D +VWICP CG QDDGS PMIGCDGCDAWYHWVCVG+ P+ S DW+C C
Sbjct: 794 ADGNEVWICPGCGSQDDGS-PMIGCDGCDAWYHWVCVGIQVPPDDSEDWYCRHC 846
>gi|195124363|ref|XP_002006663.1| GI18462 [Drosophila mojavensis]
gi|193911731|gb|EDW10598.1| GI18462 [Drosophila mojavensis]
Length = 80
Score = 98.2 bits (243), Expect = 7e-18, Method: Composition-based stats.
Identities = 47/72 (65%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
Query: 374 ELVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLRE-GLAPQCEALKNTFFECKRSLL 432
+L D++ACAG RADLK+CLLE++C ++D+KTPRQCL++ + P+C+ L+NTF+ECKRSLL
Sbjct: 9 KLADETACAGVRADLKMCLLESECCRLDKKTPRQCLQDNSVPPECQVLRNTFYECKRSLL 68
Query: 433 DNRTRFRGHKGY 444
DNR RFRG KGY
Sbjct: 69 DNRQRFRGRKGY 80
>gi|195436236|ref|XP_002066075.1| GK22128 [Drosophila willistoni]
gi|194162160|gb|EDW77061.1| GK22128 [Drosophila willistoni]
Length = 80
Score = 98.2 bits (243), Expect = 8e-18, Method: Composition-based stats.
Identities = 47/72 (65%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
Query: 374 ELVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLRE-GLAPQCEALKNTFFECKRSLL 432
+L D++ACAG RADLK+CLLE++C ++D+KTPRQCL++ + P+C+ L+NTF+ECKRSLL
Sbjct: 9 KLADETACAGVRADLKMCLLESECCRLDKKTPRQCLQDNSVPPECQILRNTFYECKRSLL 68
Query: 433 DNRTRFRGHKGY 444
DNR RFRG KGY
Sbjct: 69 DNRQRFRGRKGY 80
>gi|269146714|gb|ACZ28303.1| cytochrome c oxidase assembly protein PET191 [Simulium nigrimanum]
Length = 81
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 3/77 (3%)
Query: 371 DPSELVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLR--EGLAPQ-CEALKNTFFEC 427
D L DKS C+G RADLK+CLLE+DC + D+K PR+CL +G P+ C L+ TFFEC
Sbjct: 5 DGEVLADKSTCSGVRADLKMCLLESDCCKRDKKLPRECLNTFDGSVPENCLVLRKTFFEC 64
Query: 428 KRSLLDNRTRFRGHKGY 444
KRSLLDNR RFRG+KGY
Sbjct: 65 KRSLLDNRQRFRGNKGY 81
>gi|357604267|gb|EHJ64117.1| hypothetical protein KGM_08958 [Danaus plexippus]
Length = 1167
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 282 YDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKC--- 337
Y ++W+CPACG D+GS PMIGCDGCD WYHW+CVG+ +P T DWFC C
Sbjct: 1081 YVDEQGNKIWVCPACGRPDNGS-PMIGCDGCDGWYHWICVGITEDPGATEDWFCKSCVAK 1139
Query: 338 -SKVDEGSRKEKKKRGRKKK 356
+ + KKRGRK K
Sbjct: 1140 RAAMVLAGVTSGKKRGRKPK 1159
>gi|195133998|ref|XP_002011425.1| GI14094 [Drosophila mojavensis]
gi|193912048|gb|EDW10915.1| GI14094 [Drosophila mojavensis]
Length = 1094
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 281 EYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKC 337
Y D ++WICPACG DDGS MIGCDGCDAWYHW+CVG++ P + DWFC C
Sbjct: 1016 SYVDADGYRIWICPACGKVDDGS-AMIGCDGCDAWYHWICVGILVAPNDNEDWFCRVC 1072
>gi|157167842|ref|XP_001662427.1| PET191 polypeptide, putative [Aedes aegypti]
gi|108871285|gb|EAT35510.1| AAEL012327-PA [Aedes aegypti]
Length = 82
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 59/73 (80%), Gaps = 3/73 (4%)
Query: 375 LVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCL--REGLAP-QCEALKNTFFECKRSL 431
L D+SACA RADLK+CLL++DC + +RK PR+CL ++G P +C AL+NTFFECKRSL
Sbjct: 10 LADESACARVRADLKMCLLQSDCCKKERKLPRECLSRQDGSVPDECFALRNTFFECKRSL 69
Query: 432 LDNRTRFRGHKGY 444
LDNR RFRG KGY
Sbjct: 70 LDNRQRFRGPKGY 82
>gi|45550888|ref|NP_652380.2| CG13018 [Drosophila melanogaster]
gi|45445552|gb|AAF58293.2| CG13018 [Drosophila melanogaster]
gi|66772563|gb|AAY55593.1| IP03340p [Drosophila melanogaster]
gi|220959972|gb|ACL92529.1| CG13018-PA [synthetic construct]
Length = 79
Score = 95.5 bits (236), Expect = 5e-17, Method: Composition-based stats.
Identities = 47/71 (66%), Positives = 59/71 (83%), Gaps = 2/71 (2%)
Query: 375 LVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAP-QCEALKNTFFECKRSLLD 433
L D++ACAG RADLK+CLLE+DC ++ KTPRQCL++ P +C+ L+NTF+ECKRSLLD
Sbjct: 10 LADETACAGVRADLKMCLLESDCCKMG-KTPRQCLQDNNVPAECQVLRNTFYECKRSLLD 68
Query: 434 NRTRFRGHKGY 444
NR RFRG KGY
Sbjct: 69 NRQRFRGRKGY 79
>gi|332374160|gb|AEE62221.1| unknown [Dendroctonus ponderosae]
Length = 83
Score = 95.1 bits (235), Expect = 6e-17, Method: Composition-based stats.
Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
Query: 367 RFERDPSELVDKSACAGSRADLKLCLLETDCVQVDRKTPRQC--LREGLAP-QCEALKNT 423
R+E + L DKSACAG RADLK+CLLE+DC + +KTPR+C L +G P +C L+NT
Sbjct: 3 RYENENETLKDKSACAGVRADLKMCLLESDCCRSRQKTPRECLNLNDGTVPSECYVLRNT 62
Query: 424 FFECKRSLLDNRTRFRGHKGY 444
FFECKRS+LD R RFRG KGY
Sbjct: 63 FFECKRSMLDARQRFRGRKGY 83
>gi|195172552|ref|XP_002027061.1| GL18176 [Drosophila persimilis]
gi|194112839|gb|EDW34882.1| GL18176 [Drosophila persimilis]
Length = 1497
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 265 IKPVKSPSPPP----VAAADEYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVC 320
++P SP PP + Y + ++WICPACG DDGS MIGCDGCDAWYHW C
Sbjct: 1402 VEPTHSPDCPPQIVELNRPSSYVDAEGNRIWICPACGKVDDGSA-MIGCDGCDAWYHWTC 1460
Query: 321 VGLVAEP-ETSDWFCPKC 337
VG+ P + DWFC C
Sbjct: 1461 VGITVAPKDNDDWFCRVC 1478
>gi|115711961|ref|XP_797041.2| PREDICTED: uncharacterized protein LOC592424 [Strongylocentrotus
purpuratus]
Length = 1047
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 39/52 (75%)
Query: 286 DSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKC 337
D +++W CPAC DDG LPMIGCD CD WYHW CVG+ EP T+DW+C +C
Sbjct: 982 DGEKIWYCPACKKADDGVLPMIGCDTCDDWYHWECVGITEEPSTNDWYCKRC 1033
>gi|353230188|emb|CCD76359.1| hypothetical protein Smp_127180 [Schistosoma mansoni]
Length = 1690
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 10/84 (11%)
Query: 256 KRESSPKIVIKPVKSPSPPPVAAADEYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAW 315
+RES+ +IV++ A + Y D +Q+W+CP C ++DDG+L MIGCD C W
Sbjct: 1417 QRESASQIVVES---------AGSSYYFNNDGEQIWLCPICLLEDDGNL-MIGCDNCQDW 1466
Query: 316 YHWVCVGLVAEPETSDWFCPKCSK 339
YH C+GL PE WFCPKCS+
Sbjct: 1467 YHSTCLGLSKAPEVPQWFCPKCSQ 1490
>gi|194883182|ref|XP_001975682.1| GG22444 [Drosophila erecta]
gi|195334244|ref|XP_002033794.1| GM20230 [Drosophila sechellia]
gi|195485857|ref|XP_002091262.1| GE12335 [Drosophila yakuba]
gi|190658869|gb|EDV56082.1| GG22444 [Drosophila erecta]
gi|194125764|gb|EDW47807.1| GM20230 [Drosophila sechellia]
gi|194177363|gb|EDW90974.1| GE12335 [Drosophila yakuba]
Length = 79
Score = 95.1 bits (235), Expect = 7e-17, Method: Composition-based stats.
Identities = 47/71 (66%), Positives = 59/71 (83%), Gaps = 2/71 (2%)
Query: 375 LVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAP-QCEALKNTFFECKRSLLD 433
L D++ACAG RADLK+CLLE+DC ++ KTPRQCL++ P +C+ L+NTF+ECKRSLLD
Sbjct: 10 LADETACAGVRADLKMCLLESDCCKMG-KTPRQCLQDNNVPSECQVLRNTFYECKRSLLD 68
Query: 434 NRTRFRGHKGY 444
NR RFRG KGY
Sbjct: 69 NRQRFRGRKGY 79
>gi|256072183|ref|XP_002572416.1| hypothetical protein [Schistosoma mansoni]
Length = 1282
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 10/84 (11%)
Query: 256 KRESSPKIVIKPVKSPSPPPVAAADEYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAW 315
+RES+ +IV++ A + Y D +Q+W+CP C ++DDG+L MIGCD C W
Sbjct: 926 QRESASQIVVE---------SAGSSYYFNNDGEQIWLCPICLLEDDGNL-MIGCDNCQDW 975
Query: 316 YHWVCVGLVAEPETSDWFCPKCSK 339
YH C+GL PE WFCPKCS+
Sbjct: 976 YHSTCLGLSKAPEVPQWFCPKCSQ 999
>gi|195469351|ref|XP_002099601.1| GE14514 [Drosophila yakuba]
gi|194185702|gb|EDW99313.1| GE14514 [Drosophila yakuba]
Length = 1413
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 282 YDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKCS 338
Y + ++WICPACG DDGS MIGCDGCDAWYHW+CVG+ P + DWFC C+
Sbjct: 1339 YVDAEGNRIWICPACGKVDDGS-AMIGCDGCDAWYHWICVGITFAPKDNDDWFCRVCA 1395
>gi|307200668|gb|EFN80771.1| Transcription initiation factor TFIID subunit 3 [Harpegnathos
saltator]
Length = 1052
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKC 337
+QVWICPACG QDDGS PMIGCD CDAWYHWVCVG+ P + DW+C C
Sbjct: 979 RQVWICPACGNQDDGS-PMIGCDDCDAWYHWVCVGMQVPPADDEDWYCRFC 1028
>gi|198462037|ref|XP_001352319.2| GA15182 [Drosophila pseudoobscura pseudoobscura]
gi|198139921|gb|EAL29265.2| GA15182 [Drosophila pseudoobscura pseudoobscura]
Length = 1497
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 265 IKPVKSPSPPP----VAAADEYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVC 320
++P SP PP + Y + ++WICPACG DDGS MIGCDGCDAWYHW C
Sbjct: 1402 VEPNHSPDCPPQIVELNRPSSYVDAEGNRIWICPACGKVDDGSA-MIGCDGCDAWYHWTC 1460
Query: 321 VGLVAEP-ETSDWFCPKC 337
VG+ P + DWFC C
Sbjct: 1461 VGITVAPKDNDDWFCRVC 1478
>gi|24638625|ref|NP_651923.2| bip2 [Drosophila melanogaster]
gi|7304310|gb|AAF59342.1| bip2 [Drosophila melanogaster]
Length = 1406
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 282 YDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKC 337
Y + ++WICPACG DDGS MIGCDGCDAWYHW+CVG+ P + DWFC C
Sbjct: 1332 YVDAEGNRIWICPACGKVDDGSA-MIGCDGCDAWYHWICVGITFAPKDNDDWFCRVC 1387
>gi|291234121|ref|XP_002736994.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 83
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 374 ELVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQ-CEALKNTFFECKRSLL 432
EL DK CA +R DLK+CLL +DCV+ + KTPR+CL+EG Q C AL+ FFECKRS+L
Sbjct: 10 ELQDKRPCAAAREDLKMCLLASDCVRKEGKTPRECLKEGRVNQECNALRVAFFECKRSVL 69
Query: 433 DNRTRFRGHKG 443
DNRTRFRG KG
Sbjct: 70 DNRTRFRGRKG 80
>gi|194913567|ref|XP_001982727.1| GG16447 [Drosophila erecta]
gi|190647943|gb|EDV45246.1| GG16447 [Drosophila erecta]
Length = 1418
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 281 EYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKC 337
Y + ++WICPACG DDGS MIGCDGCDAWYHW+CVG+ P + DWFC C
Sbjct: 1343 SYVDAEGNRIWICPACGKVDDGS-AMIGCDGCDAWYHWICVGITFAPKDNDDWFCRVC 1399
>gi|347963346|ref|XP_001687763.2| AGAP000189-PA [Anopheles gambiae str. PEST]
gi|333467243|gb|EDO64354.2| AGAP000189-PA [Anopheles gambiae str. PEST]
Length = 1684
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 286 DSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKC 337
D VWICPACG DDG+ PMIGCDGCDAWYHWVCVG+ P + DW+C C
Sbjct: 1607 DGNTVWICPACGRVDDGT-PMIGCDGCDAWYHWVCVGIQVPPDDNEDWYCRVC 1658
>gi|307189532|gb|EFN73909.1| Uncharacterized protein C2orf64-like protein [Camponotus
floridanus]
Length = 83
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 59/81 (72%), Gaps = 3/81 (3%)
Query: 367 RFERDPSELVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLR--EGLAP-QCEALKNT 423
RFE + L DKS CA RADLK+CLL++DC ++ + TPR+CLR +G P +C AL+N
Sbjct: 3 RFEEEGETLKDKSRCANIRADLKMCLLQSDCCKIYKHTPRECLRIQDGTVPDECFALRNI 62
Query: 424 FFECKRSLLDNRTRFRGHKGY 444
FF+CK S++D R RFRG KGY
Sbjct: 63 FFDCKHSIIDGRRRFRGPKGY 83
>gi|6634096|emb|CAB64265.1| BIP2 protein [Drosophila melanogaster]
Length = 1406
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 282 YDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKC 337
Y + ++WICPACG D+GS MIGCDGCDAWYHW+CVG+ P + DWFC C
Sbjct: 1332 YVDAEGNRIWICPACGKVDEGSA-MIGCDGCDAWYHWICVGITFAPKDNDDWFCRVC 1387
>gi|195553685|ref|XP_002076719.1| GD15475 [Drosophila simulans]
gi|194202298|gb|EDX15874.1| GD15475 [Drosophila simulans]
Length = 683
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 281 EYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKC 337
Y + ++WICPACG DDGS MIGCDGCDAWYHW+CVG+ P + DWFC C
Sbjct: 608 SYVDAEGNRIWICPACGKVDDGS-AMIGCDGCDAWYHWICVGITFAPKDNDDWFCRIC 664
>gi|260816297|ref|XP_002602908.1| hypothetical protein BRAFLDRAFT_98089 [Branchiostoma floridae]
gi|229288221|gb|EEN58920.1| hypothetical protein BRAFLDRAFT_98089 [Branchiostoma floridae]
Length = 1052
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 286 DSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCS 338
+ + +WICPAC DDGS PM+GCD CD WYHW CVG+ EP WFCP+CS
Sbjct: 983 EGETIWICPACSRPDDGS-PMVGCDNCDDWYHWPCVGITEEPTEDKWFCPRCS 1034
>gi|321467967|gb|EFX78955.1| hypothetical protein DAPPUDRAFT_319993 [Daphnia pulex]
Length = 964
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Query: 282 YDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKCSKV 340
YD +K +WICPACG QDDG+ PMIGCD CD WYHWVCVG+ P ET WFC +C
Sbjct: 890 YDEFGNK-IWICPACGRQDDGT-PMIGCDECDDWYHWVCVGIRVPPAETESWFCQRCIAK 947
Query: 341 DEGS 344
+GS
Sbjct: 948 KQGS 951
>gi|4584215|emb|CAB40628.1| Bip2 protein [Drosophila melanogaster]
gi|13374081|emb|CAC34474.1| TAFII155 protein [Drosophila melanogaster]
Length = 1408
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 282 YDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKC 337
Y + ++WICPACG D+GS MIGCDGCDAWYHW+CVG+ P + DWFC C
Sbjct: 1334 YVDTEGNRIWICPACGKVDEGS-AMIGCDGCDAWYHWICVGITFAPKDNDDWFCRVC 1389
>gi|350589635|ref|XP_003357819.2| PREDICTED: transcription initiation factor TFIID subunit 3-like,
partial [Sus scrofa]
Length = 793
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKC 337
Q+WICP C DDGS PMIGCDGCD WYHW CVG+ A PE WFCPKC
Sbjct: 727 NQIWICPGCNKPDDGS-PMIGCDGCDDWYHWPCVGITAAPPEEMQWFCPKC 776
>gi|157127577|ref|XP_001661098.1| hypothetical protein AaeL_AAEL010862 [Aedes aegypti]
gi|108872884|gb|EAT37109.1| AAEL010862-PA [Aedes aegypti]
Length = 372
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 15/77 (19%)
Query: 285 GDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETS-DWFCPKCSKVDEG 343
D VWICPACG DDG+ PMIGCDGCDAWYHWVCVG+ P+++ DW+C C
Sbjct: 294 ADGNVVWICPACGRVDDGT-PMIGCDGCDAWYHWVCVGIQVPPDSNEDWYCRVC------ 346
Query: 344 SRKEKKKRGRKKKTHQD 360
G+K+++H D
Sbjct: 347 -------IGKKQESHGD 356
>gi|198415671|ref|XP_002126955.1| PREDICTED: similar to TAF3 RNA polymerase II, TATA box binding
protein (TBP)-associated factor [Ciona intestinalis]
Length = 850
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 286 DSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKC 337
D +VWICP C DDGS PMIGCD CD WYHW CVG++ EP E +WFCP C
Sbjct: 782 DGNRVWICPGCNKPDDGS-PMIGCDKCDDWYHWPCVGIIQEPPENEEWFCPNC 833
>gi|170057999|ref|XP_001864729.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877239|gb|EDS40622.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 417
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Query: 286 DSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETS-DWFCPKC 337
D VWICPACG DDG+ PMIGCDGCDAWYHWVCVG+ P+++ DW+C C
Sbjct: 340 DGNVVWICPACGRVDDGT-PMIGCDGCDAWYHWVCVGIQVPPDSNEDWYCRVC 391
>gi|432089718|gb|ELK23535.1| Transcription initiation factor TFIID subunit 3 [Myotis davidii]
Length = 777
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCDGCD WYHW CVGL+A PE WFC KC+
Sbjct: 711 NQIWICPGCNKPDDGS-PMIGCDGCDDWYHWPCVGLMAAPPEEMQWFCSKCAN 762
>gi|126337157|ref|XP_001363320.1| PREDICTED: uncharacterized protein C2orf64 homolog [Monodelphis
domestica]
Length = 75
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
D ACAG + DL CLL++DCV + KTPRQCL+EG C ALK +FFECKRS+LD R+
Sbjct: 11 DDGACAGVKEDLGACLLQSDCVLKEGKTPRQCLKEG---HCTALKYSFFECKRSMLDARS 67
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 68 RFRGRKGY 75
>gi|17861888|gb|AAL39421.1| GM10839p [Drosophila melanogaster]
Length = 363
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 281 EYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKC 337
Y + ++WICPACG DDGS MIGCDGCDAWYHW+CVG+ P + DWFC C
Sbjct: 288 SYVDAEGNRIWICPACGKVDDGSA-MIGCDGCDAWYHWICVGITFAPKDNDDWFCRVC 344
>gi|303324589|ref|NP_001181953.1| cytochrome c oxidase assembly factor 5 [Bos taurus]
gi|426224075|ref|XP_004006199.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Ovis aries]
gi|122140947|sp|Q3ZCK8.1|COA5_BOVIN RecName: Full=Cytochrome c oxidase assembly factor 5
gi|73587167|gb|AAI02105.1| Chromosome 2 open reading frame 64 ortholog [Bos taurus]
gi|296482839|tpg|DAA24954.1| TPA: Uncharacterized protein C2orf64 homolog [Bos taurus]
gi|440893157|gb|ELR46036.1| hypothetical protein M91_02130 [Bos grunniens mutus]
Length = 74
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 379 SACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRTRF 438
ACAG + DL LCLL++DCV + K+PRQCL+EG C+ALK +FFECKRS+LD R+RF
Sbjct: 12 GACAGVKEDLGLCLLQSDCVLKEGKSPRQCLKEG---NCKALKYSFFECKRSMLDARSRF 68
Query: 439 RGHKGY 444
RG KGY
Sbjct: 69 RGRKGY 74
>gi|326913732|ref|XP_003203188.1| PREDICTED: uncharacterized protein C2orf64 homolog [Meleagris
gallopavo]
Length = 75
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
DK AC+G R DL+ CLLE+ CV + K+PRQCLREG C+ L+ TFF CKRS+LD RT
Sbjct: 11 DKRACSGVREDLRQCLLESPCVLQENKSPRQCLREG---HCKGLQLTFFACKRSMLDTRT 67
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 68 RFRGRKGY 75
>gi|426240699|ref|XP_004014231.1| PREDICTED: transcription initiation factor TFIID subunit 3 [Ovis
aries]
Length = 930
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKCS
Sbjct: 864 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCSN 915
>gi|345310087|ref|XP_001515948.2| PREDICTED: transcription initiation factor TFIID subunit 3-like
[Ornithorhynchus anatinus]
Length = 1013
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 947 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 998
>gi|351698946|gb|EHB01865.1| Transcription initiation factor TFIID subunit 3, partial
[Heterocephalus glaber]
Length = 791
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 725 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 776
>gi|74181644|dbj|BAE32543.1| unnamed protein product [Mus musculus]
Length = 932
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 865 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 916
>gi|403301322|ref|XP_003941343.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Saimiri
boliviensis boliviensis]
Length = 74
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 52/68 (76%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
+ AC+G R DL LCLL++DCV + K+PR+CL+EG C+ALKN+FFECKRS LD R
Sbjct: 10 EGGACSGLREDLGLCLLQSDCVIQEGKSPRECLKEGY---CKALKNSFFECKRSTLDTRA 66
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 67 RFRGKKGY 74
>gi|307200301|gb|EFN80566.1| Uncharacterized protein C2orf64-like protein [Harpegnathos
saltator]
Length = 82
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 56/73 (76%), Gaps = 3/73 (4%)
Query: 375 LVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLR--EGLAP-QCEALKNTFFECKRSL 431
L DKS CA RADLK+CLLE+DC ++ ++TPR+CLR +G P +C AL+ TFFECK S+
Sbjct: 10 LKDKSRCANIRADLKMCLLESDCCKIHKRTPRECLRMYDGTVPDECFALRITFFECKHSI 69
Query: 432 LDNRTRFRGHKGY 444
LD R RF+G KGY
Sbjct: 70 LDGRRRFKGPKGY 82
>gi|262231748|ref|NP_082024.2| transcription initiation factor TFIID subunit 3 [Mus musculus]
gi|110287981|sp|Q5HZG4.2|TAF3_MOUSE RecName: Full=Transcription initiation factor TFIID subunit 3;
AltName: Full=140 kDa TATA box-binding
protein-associated factor; AltName: Full=TBP-associated
factor 3; AltName: Full=Transcription initiation factor
TFIID 140 kDa subunit; Short=TAF(II)140; Short=TAF140;
Short=TAFII-140; Short=TAFII140
gi|13374178|emb|CAC34476.1| TAFII140 protein [Mus musculus]
gi|148676053|gb|EDL08000.1| TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Mus musculus]
gi|187951735|gb|AAI37618.1| TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Mus musculus]
gi|187957546|gb|AAI37619.1| TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Mus musculus]
Length = 932
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 865 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 916
>gi|405113028|ref|NP_001258271.1| TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Rattus norvegicus]
gi|149021019|gb|EDL78626.1| rCG55816 [Rattus norvegicus]
Length = 930
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 863 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 914
>gi|57242908|gb|AAH89030.1| TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Mus musculus]
Length = 948
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 881 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 932
>gi|73949156|ref|XP_544263.2| PREDICTED: transcription initiation factor TFIID subunit 3 [Canis
lupus familiaris]
Length = 932
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 866 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 917
>gi|355723106|gb|AES07785.1| TAF3 RNA polymerase II, TATA box binding protein -associated
factor, 140kDa [Mustela putorius furo]
Length = 933
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 868 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 919
>gi|417413279|gb|JAA52976.1| Putative transcription initiation factor tfiid subunit 3, partial
[Desmodus rotundus]
Length = 972
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 906 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 957
>gi|291386233|ref|XP_002710041.1| PREDICTED: Uncharacterized protein C2orf64 homolog [Oryctolagus
cuniculus]
Length = 74
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 53/68 (77%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
+ +ACAG + DL CLL++DCV + K+PRQCL+EG C+ALK +FFECKRS+LD R+
Sbjct: 10 EGAACAGVKEDLGACLLQSDCVLQEGKSPRQCLKEGY---CKALKYSFFECKRSMLDARS 66
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 67 RFRGRKGY 74
>gi|151301171|ref|NP_114129.1| transcription initiation factor TFIID subunit 3 [Homo sapiens]
gi|74747393|sp|Q5VWG9.1|TAF3_HUMAN RecName: Full=Transcription initiation factor TFIID subunit 3;
AltName: Full=140 kDa TATA box-binding
protein-associated factor; AltName: Full=TBP-associated
factor 3; AltName: Full=Transcription initiation factor
TFIID 140 kDa subunit; Short=TAF(II)140; Short=TAF140;
Short=TAFII-140; Short=TAFII140
gi|225000128|gb|AAI72366.1| TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 140kDa [synthetic construct]
Length = 929
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLV-AEPETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++ A PE WFCPKC+
Sbjct: 863 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMTAPPEEMQWFCPKCAN 914
>gi|402879598|ref|XP_003903421.1| PREDICTED: transcription initiation factor TFIID subunit 3 [Papio
anubis]
Length = 931
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLV-AEPETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++ A PE WFCPKC+
Sbjct: 865 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMTAPPEEMQWFCPKCAN 916
>gi|170049119|ref|XP_001870888.1| PET191 polypeptide [Culex quinquefasciatus]
gi|170049123|ref|XP_001870890.1| PET191 polypeptide [Culex quinquefasciatus]
gi|167871023|gb|EDS34406.1| PET191 polypeptide [Culex quinquefasciatus]
gi|167871025|gb|EDS34408.1| PET191 polypeptide [Culex quinquefasciatus]
Length = 82
Score = 88.2 bits (217), Expect = 7e-15, Method: Composition-based stats.
Identities = 46/74 (62%), Positives = 58/74 (78%), Gaps = 3/74 (4%)
Query: 374 ELVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLR--EGLAP-QCEALKNTFFECKRS 430
+L D++ACA RADLK+CLL++DC + + K PR+CL +G P +C AL+NTFFECKRS
Sbjct: 9 QLADETACARVRADLKMCLLQSDCCKKEHKLPRECLSRTDGSVPDECHALRNTFFECKRS 68
Query: 431 LLDNRTRFRGHKGY 444
LLDNR RFRG KGY
Sbjct: 69 LLDNRQRFRGRKGY 82
>gi|402891657|ref|XP_003909059.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Papio
anubis]
Length = 74
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 50/68 (73%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
+ ACAG + DL CLL++DCV + K+PRQCL+EG C ALK FFEC+RS+LDNR
Sbjct: 10 EGGACAGLKEDLGECLLQSDCVVQEGKSPRQCLKEG---HCSALKYAFFECRRSMLDNRA 66
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 67 RFRGRKGY 74
>gi|332833584|ref|XP_001157768.2| PREDICTED: transcription initiation factor TFIID subunit 3 [Pan
troglodytes]
Length = 931
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLV-AEPETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++ A PE WFCPKC+
Sbjct: 865 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMTAPPEEMQWFCPKCAN 916
>gi|297300462|ref|XP_002808540.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID
subunit 3-like [Macaca mulatta]
Length = 1116
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 1050 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 1101
>gi|410963187|ref|XP_003988147.1| PREDICTED: transcription initiation factor TFIID subunit 3 [Felis
catus]
Length = 1017
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 287 SKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 950 GNQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 1002
>gi|395527100|ref|XP_003765689.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Sarcophilus
harrisii]
Length = 75
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
D ACAG + DL CLL++DCV + KT RQCL+EG C+ALK +FFECKRS+LD R+
Sbjct: 11 DNGACAGVKEDLGACLLQSDCVLKEGKTLRQCLKEG---NCKALKYSFFECKRSMLDARS 67
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 68 RFRGRKGY 75
>gi|410954620|ref|XP_003983961.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Felis
catus]
Length = 74
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 52/68 (76%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
+ ACAG + DL CLL++DCV + K+PRQCL+EG C+ALK +FFECKRS+LD R+
Sbjct: 10 EGGACAGVKEDLGACLLQSDCVLQEGKSPRQCLKEG---NCKALKYSFFECKRSMLDARS 66
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 67 RFRGRKGY 74
>gi|344277699|ref|XP_003410637.1| PREDICTED: transcription initiation factor TFIID subunit 3
[Loxodonta africana]
Length = 930
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG+ A PE WFCPKC+
Sbjct: 864 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGITAAPPEEMQWFCPKCAN 915
>gi|395827493|ref|XP_003786936.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 3, partial [Otolemur garnettii]
Length = 1004
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 938 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 989
>gi|126340354|ref|XP_001363162.1| PREDICTED: transcription initiation factor TFIID subunit 3
[Monodelphis domestica]
Length = 932
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVGL+A PE WFCP C+
Sbjct: 866 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGLMAAPPEEMQWFCPMCAN 917
>gi|113931304|ref|NP_001039098.1| cytochrome c oxidase assembly factor 5 [Xenopus (Silurana)
tropicalis]
gi|123892336|sp|Q28CA1.1|COA5_XENTR RecName: Full=Cytochrome c oxidase assembly factor 5
gi|89268949|emb|CAJ81515.1| novel protein [Xenopus (Silurana) tropicalis]
Length = 75
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 52/68 (76%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
DK CAG + DLK CLL+TDCV + K+P++CL+EG C+AL+ TFFECKRS+LD R
Sbjct: 11 DKHPCAGVKEDLKSCLLQTDCVLQEGKSPKECLKEGY---CKALQVTFFECKRSILDTRA 67
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 68 RFRGRKGY 75
>gi|303523445|ref|NP_001181968.1| cytochrome c oxidase assembly factor 5 [Pongo abelii]
gi|75042654|sp|Q5RFJ0.1|COA5_PONAB RecName: Full=Cytochrome c oxidase assembly factor 5
gi|55725202|emb|CAH89467.1| hypothetical protein [Pongo abelii]
Length = 74
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
Query: 379 SACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRTRF 438
AC G + DL CLLE+DCV + K+PRQCL+EG C +LK FFECKRS+LDNR RF
Sbjct: 12 GACGGLKEDLGACLLESDCVVQEGKSPRQCLKEGY---CNSLKYAFFECKRSVLDNRARF 68
Query: 439 RGHKGY 444
RG KGY
Sbjct: 69 RGRKGY 74
>gi|359071307|ref|XP_003586802.1| PREDICTED: transcription initiation factor TFIID subunit 3 [Bos
taurus]
gi|440906269|gb|ELR56551.1| Transcription initiation factor TFIID subunit 3 [Bos grunniens
mutus]
Length = 932
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKC 337
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC
Sbjct: 866 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKC 915
>gi|432861265|ref|XP_004069582.1| PREDICTED: transcription initiation factor TFIID subunit 3-like
isoform 2 [Oryzias latipes]
Length = 930
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 287 SKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCS 338
Q+WICP C DDGS PMIGCD CD WYHW CVG+VAE PE WFC KCS
Sbjct: 863 GNQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIVAEPPEDQPWFCVKCS 914
>gi|432861263|ref|XP_004069581.1| PREDICTED: transcription initiation factor TFIID subunit 3-like
isoform 1 [Oryzias latipes]
Length = 933
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 287 SKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCS 338
Q+WICP C DDGS PMIGCD CD WYHW CVG+VAE PE WFC KCS
Sbjct: 866 GNQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIVAEPPEDQPWFCVKCS 917
>gi|417395411|gb|JAA44767.1| Putative cytochrome c oxidase assembly factor 5 [Desmodus rotundus]
Length = 74
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
+ ACAG + DL CLL++DCV + K+PRQCL+EG C ALK +FFECKRS+LD R+
Sbjct: 10 EGGACAGVKEDLGACLLQSDCVLQEGKSPRQCLKEG---NCRALKYSFFECKRSMLDARS 66
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 67 RFRGRKGY 74
>gi|348575371|ref|XP_003473463.1| PREDICTED: transcription initiation factor TFIID subunit 3 [Cavia
porcellus]
Length = 928
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCS 338
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 862 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGVMAAPPEEMQWFCPKCA 912
>gi|196014287|ref|XP_002117003.1| hypothetical protein TRIADDRAFT_31742 [Trichoplax adhaerens]
gi|190580494|gb|EDV20577.1| hypothetical protein TRIADDRAFT_31742 [Trichoplax adhaerens]
Length = 86
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 52/68 (76%), Gaps = 3/68 (4%)
Query: 380 ACAGSRADLKLCLLETDCVQVDRKTPRQCLR---EGLAPQCEALKNTFFECKRSLLDNRT 436
ACAG R +L CLL +DCVQ +TP++CL+ +G+ +C L+N+FFECKRSLLDNRT
Sbjct: 19 ACAGLRQELIDCLLASDCVQKHGRTPKECLKKENQGVPYECRTLQNSFFECKRSLLDNRT 78
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 79 RFRGSKGY 86
>gi|73970084|ref|XP_854444.1| PREDICTED: uncharacterized protein LOC611656 [Canis lupus
familiaris]
Length = 74
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
+ ACAG + DL CLL++DCV + K+PRQCL+EG C+ALK +FFECKRS+LD R
Sbjct: 10 EGGACAGVKEDLGACLLQSDCVLQEGKSPRQCLKEG---NCKALKYSFFECKRSMLDARA 66
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 67 RFRGRKGY 74
>gi|74193687|dbj|BAE22792.1| unnamed protein product [Mus musculus]
Length = 554
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 287 SKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 486 GNQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 538
>gi|380813172|gb|AFE78460.1| protein C2orf64 [Macaca mulatta]
Length = 74
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 3/69 (4%)
Query: 376 VDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNR 435
++ AC G + DL CLL++DCV + K+PRQCL+EG C ALK FFEC+RS+LDNR
Sbjct: 9 LEGGACGGLKEDLGECLLQSDCVVQEGKSPRQCLKEG---HCSALKYAFFECRRSMLDNR 65
Query: 436 TRFRGHKGY 444
RFRG KGY
Sbjct: 66 ARFRGRKGY 74
>gi|312379722|gb|EFR25909.1| hypothetical protein AND_08343 [Anopheles darlingi]
Length = 164
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 275 PVAAADEYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL-VAEPETSDWF 333
P A A D D VWICPACG DDG+ PMIGCDGCDAWYHW+CVG+ VA E DW+
Sbjct: 77 PAAPAQMTDV-DGNTVWICPACGRVDDGT-PMIGCDGCDAWYHWICVGIEVAPDENEDWY 134
Query: 334 CPKC 337
C C
Sbjct: 135 CRVC 138
>gi|291401982|ref|XP_002717391.1| PREDICTED: RNA polymerase II transcription factor TAFII140
[Oryctolagus cuniculus]
Length = 930
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
++WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 864 NKIWICPGCNKPDDGS-PMIGCDDCDGWYHWPCVGVMAAPPEEMQWFCPKCAN 915
>gi|441626275|ref|XP_004089137.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID
subunit 3 [Nomascus leucogenys]
Length = 1057
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLV-AEPETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++ A PE WFCPKC+
Sbjct: 991 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMTAPPEEMQWFCPKCAN 1042
>gi|390365480|ref|XP_003730829.1| PREDICTED: cytochrome c oxidase assembly factor 5-like
[Strongylocentrotus purpuratus]
Length = 82
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 2/66 (3%)
Query: 381 CAGSRADLKLCLLETDCVQVDRKTPRQCLREG--LAPQCEALKNTFFECKRSLLDNRTRF 438
C+G + DLK CLLE+DCV+ D+ +P++CL+EG + +C AL+ FFECKRSLLD RTRF
Sbjct: 17 CSGLKEDLKACLLESDCVRKDKMSPKECLKEGARVDSECRALQFAFFECKRSLLDTRTRF 76
Query: 439 RGHKGY 444
RG KGY
Sbjct: 77 RGRKGY 82
>gi|395843217|ref|XP_003794392.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Otolemur
garnettii]
Length = 74
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
Query: 381 CAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRTRFRG 440
C+G + DL +CLL++DCV + K+PRQCL+EG C AL+N+FFECKRS+LD R RFRG
Sbjct: 14 CSGVKEDLGVCLLQSDCVLQEGKSPRQCLKEG---HCRALQNSFFECKRSMLDTRARFRG 70
Query: 441 HKGY 444
KGY
Sbjct: 71 RKGY 74
>gi|195450727|ref|XP_002072606.1| GK13694 [Drosophila willistoni]
gi|194168691|gb|EDW83592.1| GK13694 [Drosophila willistoni]
Length = 1430
Score = 87.0 bits (214), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/83 (50%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 260 SPKIVIKPVKSPSPPPVAA----ADEYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAW 315
+P + P KS PPP Y + ++WICPACG DDGS MIGCDGCDAW
Sbjct: 1330 APTATVSPAKSECPPPQTVESNRPSSYVDAEGNRIWICPACGKVDDGS-AMIGCDGCDAW 1388
Query: 316 YHWVCVGL-VAEPETSDWFCPKC 337
YHW+CVG+ VA + DWFC C
Sbjct: 1389 YHWICVGIQVAPKDNDDWFCRVC 1411
>gi|291225073|ref|XP_002732526.1| PREDICTED: LRRGT00199-like [Saccoglossus kowalevskii]
Length = 1109
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCS 338
+++WICP C + DDGS PMIGCD CD WYHW CVG+ EP +W+C +C+
Sbjct: 1040 QKIWICPQCKLPDDGS-PMIGCDTCDDWYHWPCVGITEEPSADEWYCKRCT 1089
>gi|296223030|ref|XP_002757452.1| PREDICTED: cytochrome c oxidase assembly factor 5 [Callithrix
jacchus]
Length = 74
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
+ AC+G R DL LCLL++DCV + K+PR+CL+EG C+ALK +FFECKRS LD R
Sbjct: 10 EGGACSGLREDLGLCLLQSDCVIQEGKSPRECLKEGY---CKALKYSFFECKRSTLDTRA 66
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 67 RFRGRKGY 74
>gi|392928200|ref|NP_001257272.1| Protein TAF-3, isoform a [Caenorhabditis elegans]
gi|320202826|emb|CBZ01777.1| Protein TAF-3, isoform a [Caenorhabditis elegans]
Length = 1007
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 14/101 (13%)
Query: 259 SSPKIVIKPVKSPSPPPVAAADEYDTGD--SKQVWICPACGVQDDGSLPMIGCDGCDAWY 316
+S ++I+P+ ++ D+ G S+++WICP C V MIGCD C W+
Sbjct: 903 ASTPVIIRPL-------LSQEDDDSNGSESSEEIWICPVCSVAYTVGANMIGCDQCQDWF 955
Query: 317 HWVCVGLVAEPETSDWFCPKCSKVDEGSRKEKKKRGRKKKT 357
HW CVGL AEP S WFC +C+K ++ KK G++ T
Sbjct: 956 HWHCVGLTAEPTDSKWFCTRCTKGNKS-----KKHGKRSAT 991
>gi|388596680|ref|NP_001254471.1| protein C2orf64 [Macaca mulatta]
gi|355751519|gb|EHH55774.1| hypothetical protein EGM_05042 [Macaca fascicularis]
gi|384944140|gb|AFI35675.1| protein C2orf64 [Macaca mulatta]
Length = 74
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
+ CAG + DL CLL++DCV + K+PRQCL+EG C ALK FFEC+RS+LDNR
Sbjct: 10 EGGVCAGLKEDLGECLLQSDCVVQEGKSPRQCLKEG---HCSALKYAFFECRRSMLDNRA 66
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 67 RFRGRKGY 74
>gi|341902012|gb|EGT57947.1| hypothetical protein CAEBREN_18774 [Caenorhabditis brenneri]
Length = 998
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 274 PPVAAADEYDTGD--SKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSD 331
P ++ DE G S+++WICP C V M+GCD C W+HW CVG+ AEP S
Sbjct: 905 PLLSQEDEDSNGSDSSEEIWICPVCSVAYTVGANMVGCDMCQDWFHWHCVGITAEPTDSK 964
Query: 332 WFCPKCSKVDEGSRKEKKKRG 352
WFC +CSK ++ + K+ G
Sbjct: 965 WFCNRCSKGNKSKKHGKRSHG 985
>gi|118084233|ref|XP_001232442.1| PREDICTED: cytochrome c oxidase assembly factor 5 [Gallus gallus]
Length = 75
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
D AC+G R DL+ CLLE+ CV + K+PRQCLREG C+ L+ TFF CKRS+LD R
Sbjct: 11 DGQACSGVREDLRQCLLESPCVLQENKSPRQCLREG---HCKGLQLTFFACKRSMLDTRA 67
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 68 RFRGRKGY 75
>gi|322782657|gb|EFZ10520.1| hypothetical protein SINV_00579 [Solenopsis invicta]
Length = 83
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
Query: 368 FERDPSELVDKSACAGSRADLKLCLLETDCVQVDRKTPRQC--LREGLAP-QCEALKNTF 424
+E + L DKS CA RADLK+CLL +DC ++ ++TPR+C LR+G P +C L+ F
Sbjct: 4 YEEEGETLKDKSRCANIRADLKMCLLLSDCCKIHKRTPRECLKLRDGTVPEECFTLRTAF 63
Query: 425 FECKRSLLDNRTRFRGHKGY 444
FECK S++D R RFRG KGY
Sbjct: 64 FECKHSIIDGRRRFRGPKGY 83
>gi|354465004|ref|XP_003494970.1| PREDICTED: transcription initiation factor TFIID subunit 3
[Cricetulus griseus]
gi|344238969|gb|EGV95072.1| Transcription initiation factor TFIID subunit 3 [Cricetulus
griseus]
Length = 930
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFC 334
Q+WICP C DDGS PMIGCDGCD WYHW CVGL+A PE WFC
Sbjct: 864 NQIWICPGCNKPDDGS-PMIGCDGCDDWYHWPCVGLMAAPPEEMQWFC 910
>gi|427786637|gb|JAA58770.1| Putative transcription initiation factor tfiid subunit 3
[Rhipicephalus pulchellus]
Length = 1137
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKCSKVDEGS 344
++WICPAC DDGS PMIGCD CD WYHWVCVG+V P E W+C +C +G+
Sbjct: 1068 NKIWICPACARPDDGS-PMIGCDECDDWYHWVCVGIVVPPKEEESWYCNRCIAKRQGA 1124
>gi|348571844|ref|XP_003471705.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Cavia
porcellus]
Length = 74
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 3/66 (4%)
Query: 379 SACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRTRF 438
ACAG + DL CLL++DCV + K+PR+CL+EG C+ALK +FFECKRS+LD R+RF
Sbjct: 12 GACAGLKEDLGACLLQSDCVLQEGKSPRECLKEGY---CKALKYSFFECKRSMLDARSRF 68
Query: 439 RGHKGY 444
RG KGY
Sbjct: 69 RGRKGY 74
>gi|348512811|ref|XP_003443936.1| PREDICTED: transcription initiation factor TFIID subunit 3-like
[Oreochromis niloticus]
Length = 943
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Query: 287 SKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLV-AEPETSDWFC 334
Q+WICP C DDGS PMIGCDGCD WYHW+CVG+V A PE WFC
Sbjct: 876 GNQIWICPGCNKPDDGS-PMIGCDGCDDWYHWLCVGVVTAPPEDQQWFC 923
>gi|344283762|ref|XP_003413640.1| PREDICTED: uncharacterized protein C2orf64 homolog [Loxodonta
africana]
Length = 74
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 50/68 (73%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
+ ACAG + DL CLL++DCV + KTPRQCL+EG C+AL+ +FFECKRS LD R
Sbjct: 10 EGGACAGVKEDLGACLLQSDCVLQEGKTPRQCLKEG---SCKALQYSFFECKRSSLDARA 66
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 67 RFRGRKGY 74
>gi|327268100|ref|XP_003218836.1| PREDICTED: uncharacterized protein C2orf64 homolog [Anolis
carolinensis]
Length = 75
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
D AC+G R DL+ CL+E+ CV + K+P+QCL+EG C L TFFECKRS+LDNR
Sbjct: 11 DGRACSGVREDLRTCLIESSCVIEEGKSPKQCLKEG---HCRGLLVTFFECKRSMLDNRA 67
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 68 RFRGLKGY 75
>gi|449275757|gb|EMC84525.1| Putative protein C2orf64 like protein [Columba livia]
Length = 75
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
D AC G R DL+ CLLE+ CV + K+P+QCLREG C +L+ TFF CKRS+LD R
Sbjct: 11 DGRACGGVREDLRQCLLESACVLQENKSPKQCLREG---HCRSLQVTFFACKRSMLDTRA 67
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 68 RFRGRKGY 75
>gi|449272885|gb|EMC82588.1| Transcription initiation factor TFIID subunit 3, partial [Columba
livia]
Length = 872
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL-VAEPETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG+ A PE WFC KC+
Sbjct: 806 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGITTAPPEEVQWFCSKCAN 857
>gi|449480695|ref|XP_004176569.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 3, partial [Taeniopygia guttata]
Length = 917
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVGL A PE WFC KC+
Sbjct: 851 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGLTAAPPEEMQWFCSKCAN 902
>gi|410896602|ref|XP_003961788.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Takifugu
rubripes]
Length = 75
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
D ACAG + D K CLL+ DCV + K P QCL+EG C+AL+ +FFECKRS+LD R+
Sbjct: 11 DNRACAGIKEDFKACLLQHDCVLKEGKLPSQCLKEG---HCKALQTSFFECKRSMLDTRS 67
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 68 RFRGRKGY 75
>gi|343459047|gb|AEM37682.1| hypothetical protein A [Epinephelus bruneus]
Length = 75
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
D ACAG R D K CLL+ DCV + K P +CL+EG C+AL+ +FFECKRS+LD R+
Sbjct: 11 DTRACAGIREDFKACLLQHDCVVKEGKMPSECLKEG---HCKALQTSFFECKRSMLDTRS 67
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 68 RFRGRKGY 75
>gi|328781696|ref|XP_003250018.1| PREDICTED: uncharacterized protein C2orf64 homolog isoform 2 [Apis
mellifera]
gi|380025062|ref|XP_003696300.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Apis
florea]
Length = 83
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Query: 366 YRFERDPSELVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLRE---GLAPQCEALKN 422
+ F+ + L DKS CA RA LK+CLLETDC ++ R+TP+ CL + +C A++
Sbjct: 2 FGFQEEGETLKDKSKCAHLRASLKMCLLETDCCKIQRRTPKDCLVSMDPSVPEECYAIRQ 61
Query: 423 TFFECKRSLLDNRTRFRGHKGY 444
TFFECK S++D R RFRG KGY
Sbjct: 62 TFFECKHSIIDGRRRFRGPKGY 83
>gi|225715018|gb|ACO13355.1| C2orf64 homolog [Esox lucius]
Length = 75
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
D AC+G R D K CLL+ DCV + K P QCL+EG C AL+ +FFECKRS+LD R+
Sbjct: 11 DGRACSGIREDFKACLLQHDCVIKEGKMPSQCLKEG---HCRALQTSFFECKRSMLDTRS 67
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 68 RFRGRKGY 75
>gi|195064387|ref|XP_001996560.1| GH23929 [Drosophila grimshawi]
gi|193892106|gb|EDV90972.1| GH23929 [Drosophila grimshawi]
Length = 1591
Score = 84.3 bits (207), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 271 PSPPPVAAADEYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL-VAEPET 329
P+ P + Y + ++WICPACG DDGS MIGCDGCDAWYHW CVG+ VA +
Sbjct: 1506 PTTPELNRPSSYVDAEGYRIWICPACGKVDDGS-AMIGCDGCDAWYHWTCVGIHVAPNDN 1564
Query: 330 SDWFCPKCSKVDEGS 344
DWFC C +GS
Sbjct: 1565 EDWFCRVCITKKKGS 1579
>gi|148227854|ref|NP_001089280.1| transcription initiation factor TFIID subunit 3 [Xenopus laevis]
gi|82178917|sp|Q5EAW9.1|TAF3_XENLA RecName: Full=Transcription initiation factor TFIID subunit 3;
AltName: Full=TBP-associated factor 3
gi|58702034|gb|AAH90215.1| MGC85078 protein [Xenopus laevis]
Length = 845
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL-VAEPETSDWFCPKC 337
Q+WICP C DDGS PMIGCD CD WYHW CVG+ A PE WFC KC
Sbjct: 779 NQIWICPGCNKPDDGS-PMIGCDQCDDWYHWPCVGINAAPPEDEQWFCTKC 828
>gi|432930925|ref|XP_004081528.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Oryzias
latipes]
Length = 75
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
D ACAG R D K CLL+ DCV + K P +CL+EG C AL+ +FFECKRS+LD R+
Sbjct: 11 DYRACAGVREDFKACLLQHDCVVKEGKKPSECLKEG---HCRALQTSFFECKRSMLDTRS 67
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 68 RFRGRKGY 75
>gi|308818222|ref|NP_001184232.1| uncharacterized protein LOC100228523 [Taeniopygia guttata]
gi|197128748|gb|ACH45246.1| putative RIKEN cDNA 6330578E17 variant 1 [Taeniopygia guttata]
gi|197128750|gb|ACH45248.1| putative RIKEN cDNA 6330578E17 variant 2 [Taeniopygia guttata]
gi|197128751|gb|ACH45249.1| putative RIKEN cDNA 6330578E17 variant 2 [Taeniopygia guttata]
gi|197128752|gb|ACH45250.1| putative RIKEN cDNA 6330578E17 variant 3 [Taeniopygia guttata]
gi|197128753|gb|ACH45251.1| putative RIKEN cDNA 6330578E17 variant 1 [Taeniopygia guttata]
gi|197128754|gb|ACH45252.1| putative RIKEN cDNA 6330578E17 variant 1 [Taeniopygia guttata]
gi|197128755|gb|ACH45253.1| putative RIKEN cDNA 6330578E17 variant 1 [Taeniopygia guttata]
Length = 75
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
D AC+G R DL+ CLLE+ CV + K+P+QCLREG C +L+ TFF CKRS+LD R
Sbjct: 11 DGRACSGVREDLRQCLLESPCVLRENKSPKQCLREG---HCRSLQVTFFACKRSMLDTRA 67
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 68 RFRGRKGY 75
>gi|308482241|ref|XP_003103324.1| hypothetical protein CRE_27660 [Caenorhabditis remanei]
gi|308260114|gb|EFP04067.1| hypothetical protein CRE_27660 [Caenorhabditis remanei]
Length = 990
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 270 SPSPPPVAAADEYDTG---DSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE 326
+P P P+ + ++ D+ S+++W+CP C V M+GCD C W+HW CVG+ AE
Sbjct: 891 APPPRPLISQEDGDSDGSESSEEIWVCPVCSVAYTVGANMVGCDQCQDWFHWHCVGITAE 950
Query: 327 PETSDWFCPKCSK 339
P S WFC +CSK
Sbjct: 951 PTDSKWFCNRCSK 963
>gi|301604546|ref|XP_002931902.1| PREDICTED: transcription initiation factor TFIID subunit 3 isoform
2 [Xenopus (Silurana) tropicalis]
Length = 930
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL-VAEPETSDWFCPKC 337
Q+WICP C DDGS PMIGCD CD WYHW CVG+ A PE WFC KC
Sbjct: 864 NQIWICPGCNKADDGS-PMIGCDLCDDWYHWPCVGINAAPPEDEQWFCTKC 913
>gi|301604544|ref|XP_002931901.1| PREDICTED: transcription initiation factor TFIID subunit 3 isoform
1 [Xenopus (Silurana) tropicalis]
Length = 928
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL-VAEPETSDWFCPKC 337
Q+WICP C DDGS PMIGCD CD WYHW CVG+ A PE WFC KC
Sbjct: 862 NQIWICPGCNKADDGS-PMIGCDLCDDWYHWPCVGINAAPPEDEQWFCTKC 911
>gi|391345558|ref|XP_003747052.1| PREDICTED: uncharacterized protein LOC100897414 [Metaseiulus
occidentalis]
Length = 782
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 8/73 (10%)
Query: 286 DSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSD--WFCPKCSKVDEG 343
D ++WICPAC DDGS PMIGCD CD WYHW CVG + EP + D WFC +C+K
Sbjct: 716 DGNKIWICPACAKPDDGS-PMIGCDQCDDWYHWECVG-IDEPPSEDVQWFCTRCTK---- 769
Query: 344 SRKEKKKRGRKKK 356
++K +KK + KK
Sbjct: 770 NKKPQKKHQKIKK 782
>gi|197128749|gb|ACH45247.1| putative RIKEN cDNA 6330578E17 variant 3 [Taeniopygia guttata]
Length = 75
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
D AC+G R DL+ CLLE+ CV + K+P+QCLREG C +L+ TFF CKRS+LD R
Sbjct: 11 DGRACSGVREDLRQCLLESPCVLRENKSPKQCLREG---HCMSLQVTFFACKRSMLDTRA 67
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 68 RFRGRKGY 75
>gi|328793512|ref|XP_001121700.2| PREDICTED: transcription initiation factor TFIID subunit 3-like
[Apis mellifera]
Length = 131
Score = 83.6 bits (205), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Query: 275 PVAAADEYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWF 333
P + D G QVWICPACG QDDGS PM+GCD CDAWYHWVCVG+ P + +W+
Sbjct: 46 PPTSTTTVDQG-GHQVWICPACGNQDDGS-PMVGCDDCDAWYHWVCVGMQVPPADNENWY 103
Query: 334 CPKC 337
C C
Sbjct: 104 CRYC 107
>gi|405961203|gb|EKC27039.1| Transcription initiation factor TFIID subunit 3 [Crassostrea gigas]
Length = 687
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 282 YDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKC 337
YD K VWICPAC + DDGS PMIGCD CD WYHW CVG+ EP E W+C KC
Sbjct: 605 YDESGQK-VWICPACKMPDDGS-PMIGCDICDDWYHWPCVGVKEEPAEEESWYCSKC 659
>gi|112363124|ref|NP_001036209.1| transcription initiation factor TFIID subunit 3 [Danio rerio]
Length = 898
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 287 SKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCS 338
Q+WICP C DDGS PMIGCD CD WYHW CVGL+A PE WFC KC+
Sbjct: 831 GNQIWICPGCNKADDGS-PMIGCDECDDWYHWPCVGLLAAPPEDQSWFCIKCA 882
>gi|312073729|ref|XP_003139651.1| hypothetical protein LOAG_04066 [Loa loa]
Length = 1397
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 125/243 (51%), Gaps = 37/243 (15%)
Query: 119 GEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKD-KEKKVDKEKEKGK-KEE 176
G+ +K KS+ KD++ K EK+ +K ++++ + K KEK E+ V +EK KG+ KE
Sbjct: 1149 GQRRKRKSVDKDEERGKGAEKD-VKNTRERRCLSESKEKEKHHSERTVVEEKVKGRNKEL 1207
Query: 177 KEKKEEKEFKMKEDKE-------KPVEKIRKEE-----------KDSEKEKKSKDKDKKL 218
K+K++ K+ DKE K +EK+ E+ K+S K + ++D L
Sbjct: 1208 KDKEKRKKHSGGRDKEHSIGKSIKEIEKLSGEDESFGSLSNVRTKNSGKNEVTRD----L 1263
Query: 219 KKEKLKKKKKEK-ERSSHEKEVIPKLTFKFGTDMEEKTKRESSPKIVIKPVKSPSPPPVA 277
L +K ER + KE +L+ + D + S+ ++K + S A
Sbjct: 1264 NNSHLPYDSVQKPERVMYAKE---QLSKRCSADSDIFESGSSTADSLVKSLDKKS----A 1316
Query: 278 AADEYDTGDSKQVWICPACGVQD-DGSLPMIGCDGCDAWYHWVCVGL-VAEPETSDWFCP 335
D D+ D+ +WICP C V +G+ M+GCD CD W+HW CVGL VA P+ + W+C
Sbjct: 1317 TLDSDDSLDT--MWICPECSVAYVEGATDMVGCDACDNWFHWSCVGLLVAPPDDAPWYCQ 1374
Query: 336 KCS 338
C+
Sbjct: 1375 NCA 1377
>gi|392928202|ref|NP_001257273.1| Protein TAF-3, isoform b [Caenorhabditis elegans]
gi|320202827|emb|CBZ01778.1| Protein TAF-3, isoform b [Caenorhabditis elegans]
Length = 348
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 14/101 (13%)
Query: 259 SSPKIVIKPVKSPSPPPVAAADEYDTGD--SKQVWICPACGVQDDGSLPMIGCDGCDAWY 316
+S ++I+P+ ++ D+ G S+++WICP C V MIGCD C W+
Sbjct: 244 ASTPVIIRPL-------LSQEDDDSNGSESSEEIWICPVCSVAYTVGANMIGCDQCQDWF 296
Query: 317 HWVCVGLVAEPETSDWFCPKCSKVDEGSRKEKKKRGRKKKT 357
HW CVGL AEP S WFC +C+K ++ KK G++ T
Sbjct: 297 HWHCVGLTAEPTDSKWFCTRCTKGNKS-----KKHGKRSAT 332
>gi|284520950|ref|NP_001165254.1| cytochrome c oxidase assembly factor 5 [Xenopus laevis]
gi|170652955|sp|A1L3N6.1|COA5_XENLA RecName: Full=Cytochrome c oxidase assembly factor 5
gi|120577621|gb|AAI30212.1| LOC100037054 protein [Xenopus laevis]
Length = 75
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
Query: 381 CAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRTRFRG 440
C G + DLK CLL++DCV + K+P++CL+EG C+AL+ TFFECKRS+LDNR RFRG
Sbjct: 15 CGGVKEDLKNCLLQSDCVLQEGKSPKECLKEG---YCKALQVTFFECKRSILDNRARFRG 71
Query: 441 HKGY 444
KGY
Sbjct: 72 RKGY 75
>gi|355737061|gb|AES12199.1| hypothetical protein [Mustela putorius furo]
Length = 84
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 49/65 (75%), Gaps = 3/65 (4%)
Query: 379 SACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRTRF 438
ACAG + DL CLL++DCV + K+P QCL+EG C+ALK +FFECKRS+LD R+RF
Sbjct: 23 GACAGVKEDLGACLLQSDCVLKEGKSPLQCLKEG---NCKALKYSFFECKRSMLDTRSRF 79
Query: 439 RGHKG 443
RG KG
Sbjct: 80 RGRKG 84
>gi|194768316|ref|XP_001966258.1| GF22835 [Drosophila ananassae]
gi|190618560|gb|EDV34084.1| GF22835 [Drosophila ananassae]
Length = 236
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 275 PVAAADEYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFC 334
P+ Y + ++WICPACG DDGS MIGCDGCDAWYHW CVG+ P+ DW+C
Sbjct: 157 PINRPSSYVDAEGNRIWICPACGKVDDGS-AMIGCDGCDAWYHWTCVGIEIAPK-DDWYC 214
Query: 335 PKC 337
C
Sbjct: 215 RVC 217
>gi|397515676|ref|XP_003828074.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID
subunit 3 [Pan paniscus]
Length = 1086
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 60/137 (43%), Gaps = 41/137 (29%)
Query: 239 VIPKLTFKFGTDMEEKTKRESSPKIVIKPVKSPSP-----------PPVAAADEYDTGD- 286
VIP+LT + G ++ K+V P P+P V A ++ G
Sbjct: 940 VIPRLTLRVGAGQDKIVIS----KVVPAPEAKPAPSQNRPXXXXXXXAVDAVVKFLCGTQ 995
Query: 287 -----------------------SKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL 323
Q+WICP C DDGS PMIGCD CD WYHW CVG+
Sbjct: 996 SHGLLTSSKVSQQQDWPHIRDEWGNQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGI 1054
Query: 324 V-AEPETSDWFCPKCSK 339
+ A PE WFCPKC+
Sbjct: 1055 MTAPPEEMQWFCPKCAN 1071
>gi|71895059|ref|NP_001026012.1| transcription initiation factor TFIID subunit 3 [Gallus gallus]
gi|82075449|sp|Q5F489.1|TAF3_CHICK RecName: Full=Transcription initiation factor TFIID subunit 3;
AltName: Full=TBP-associated factor 3
gi|60098429|emb|CAH65045.1| hypothetical protein RCJMB04_2c9 [Gallus gallus]
Length = 930
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+W CP C DDGS PMIGCD CD WYHW CVG+ A PE WFC KC+
Sbjct: 864 NQIWFCPGCNKPDDGS-PMIGCDDCDDWYHWPCVGITAAPPEEMQWFCSKCAN 915
>gi|395840595|ref|XP_003793140.1| PREDICTED: transcription initiation factor TFIID subunit 3-like
[Otolemur garnettii]
Length = 904
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCS 338
Q+WICP C DDGS PMIGCD C WYHW CVG+ A PE WFC KC+
Sbjct: 834 QIWICPGCNKPDDGS-PMIGCDNCSDWYHWPCVGITAAPPEEVQWFCLKCA 883
>gi|318037190|ref|NP_001187992.1| uncharacterized protein c2orf64-like protein [Ictalurus punctatus]
gi|308324537|gb|ADO29403.1| uncharacterized protein c2orf64-like protein [Ictalurus punctatus]
Length = 75
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
D ACAG R D K CLL+ DCV + K P +CL+EG C+ L+ +FFECKRS+LD R+
Sbjct: 11 DSRACAGIREDFKTCLLQHDCVVKEGKKPSECLKEG---HCKGLQVSFFECKRSMLDTRS 67
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 68 RFRGRKGY 75
>gi|301769193|ref|XP_002920012.1| PREDICTED: uncharacterized protein C2orf64 homolog [Ailuropoda
melanoleuca]
Length = 110
Score = 82.0 bits (201), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/65 (63%), Positives = 51/65 (78%), Gaps = 3/65 (4%)
Query: 380 ACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRTRFR 439
ACAG + DL CLL++DCV + K+PRQCL+EG C+ALK +FFECKRS+LD R+RFR
Sbjct: 49 ACAGVKEDLGACLLQSDCVLQEGKSPRQCLKEG---NCKALKYSFFECKRSMLDARSRFR 105
Query: 440 GHKGY 444
G KGY
Sbjct: 106 GRKGY 110
>gi|332260410|ref|XP_003279282.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Nomascus
leucogenys]
Length = 74
Score = 81.6 bits (200), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/65 (64%), Positives = 49/65 (75%), Gaps = 3/65 (4%)
Query: 380 ACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRTRFR 439
ACAG + DL CLL++DCV + K+PRQCL+EG C ALK FFECKRS+LDNR RFR
Sbjct: 13 ACAGLKEDLGACLLQSDCVVQEGKSPRQCLKEGY---CNALKYAFFECKRSVLDNRARFR 69
Query: 440 GHKGY 444
G KGY
Sbjct: 70 GRKGY 74
>gi|405953382|gb|EKC21056.1| Serine/threonine-protein kinase TBK1 [Crassostrea gigas]
Length = 1721
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 282 YDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKC 337
YD K VWICPAC + DDGS PMIGCD CD WYHW CVG+ EP E W+C KC
Sbjct: 1023 YDESGQK-VWICPACKMPDDGS-PMIGCDICDDWYHWPCVGVKEEPAEEESWYCSKC 1077
>gi|390465070|ref|XP_003733337.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 3-like [Callithrix jacchus]
Length = 998
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 55/109 (50%), Gaps = 15/109 (13%)
Query: 239 VIPKLTFKFGTDMEEKTKRESSPKIVIKPVKSPSPPPVAAADEYDTG--D-----SKQVW 291
VIP+LT + G ++ + ++ PS A + Q+W
Sbjct: 882 VIPRLTLRVGAGQDKMYL------FLTAGIECPSVNHFFQAGSVHVKFEEIRDEWGNQIW 935
Query: 292 ICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
ICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 936 ICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 983
>gi|26351163|dbj|BAC39218.1| unnamed protein product [Mus musculus]
Length = 191
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 287 SKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 123 GNQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 175
>gi|348531014|ref|XP_003453005.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Oreochromis
niloticus]
Length = 75
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
D ACAG R D K CLL+ DCV + K P +CL+EG C+AL+ +FFECKRS+LD R+
Sbjct: 11 DNRACAGIREDFKACLLQHDCVVKEGKKPSECLKEG---HCKALQTSFFECKRSMLDARS 67
Query: 437 RFRGHKG 443
RFRG KG
Sbjct: 68 RFRGRKG 74
>gi|321475797|gb|EFX86759.1| hypothetical protein DAPPUDRAFT_230465 [Daphnia pulex]
Length = 91
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 375 LVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREG---LAPQCEALKNTFFECKRSL 431
+VD C+ R DLK C+ TDC + ++KTPRQCL E + +C L+ +FFECKRS+
Sbjct: 12 VVDTRPCSALREDLKFCIQNTDCFKKEKKTPRQCLLENHPSVPAECHQLRQSFFECKRSI 71
Query: 432 LDNRTRFRGHKGY 444
LDNR RFRG K Y
Sbjct: 72 LDNRQRFRGRKEY 84
>gi|410908439|ref|XP_003967698.1| PREDICTED: transcription initiation factor TFIID subunit 3-like
[Takifugu rubripes]
Length = 930
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 287 SKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL-VAEPETSDWFCPKCS 338
Q+WICP C DDGS PMIGCD CD WYHW CV + A PE WFC KCS
Sbjct: 863 GNQIWICPGCNKPDDGS-PMIGCDDCDDWYHWACVRIDTAPPEDQQWFCIKCS 914
>gi|354472212|ref|XP_003498334.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Cricetulus
griseus]
Length = 74
Score = 81.3 bits (199), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 51/69 (73%), Gaps = 3/69 (4%)
Query: 376 VDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNR 435
V+ ACAG + DL CLL++ CV + K+PRQCL+EG C AL+ +FFECKRS+LD R
Sbjct: 9 VEGGACAGVKEDLGACLLQSACVLQEGKSPRQCLKEGY---CRALQYSFFECKRSMLDTR 65
Query: 436 TRFRGHKGY 444
+RFRG KGY
Sbjct: 66 SRFRGRKGY 74
>gi|229367522|gb|ACQ58741.1| C2orf64 homolog [Anoplopoma fimbria]
Length = 75
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
D ACAG R D K CLL+ DCV + K P +CL+EG +AL+ +FFECKRS+LD R+
Sbjct: 11 DGRACAGIREDFKACLLQHDCVLKEGKMPSECLKEG---HYKALQTSFFECKRSMLDTRS 67
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 68 RFRGRKGY 75
>gi|387014858|gb|AFJ49548.1| Uncharacterized protein C2orf64-like protein [Crotalus adamanteus]
Length = 75
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 50/68 (73%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
D+ AC+G R DLK CLLE CV + K+ +QCL+EG C++L + FEC+RSLLDNRT
Sbjct: 11 DRRACSGIREDLKSCLLECPCVIQEGKSAKQCLKEG---HCKSLLISMFECRRSLLDNRT 67
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 68 RFRGIKGY 75
>gi|380795909|gb|AFE69830.1| transcription initiation factor TFIID subunit 3, partial [Macaca
mulatta]
Length = 131
Score = 80.9 bits (198), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 259 SSPKIVIKPVKSPSPPPVAAADEYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHW 318
+S K ++ V + + DE+ Q+WICP C DDGS PMIGCD CD WYHW
Sbjct: 40 ASAKAPVRSVVTETVSTYVIRDEW----GNQIWICPGCNKPDDGS-PMIGCDDCDDWYHW 94
Query: 319 VCVGLVAE-PETSDWFCPKCS 338
CVG++A PE WFCPKC+
Sbjct: 95 PCVGIMAAPPEEMQWFCPKCA 115
>gi|195402233|ref|XP_002059711.1| GJ14147 [Drosophila virilis]
gi|194155925|gb|EDW71109.1| GJ14147 [Drosophila virilis]
Length = 1576
Score = 80.9 bits (198), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 266 KPVKSPSPPP---VAAADEYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVG 322
+P S + PP + Y D ++WICPACG DDGS MIGCDGCDAWYHW CVG
Sbjct: 1483 QPEGSQTLPPNLELNRPSSYVDADGYRIWICPACGKVDDGS-AMIGCDGCDAWYHWTCVG 1541
Query: 323 LVAEP-ETSDWFCPKC 337
++ P + DWFC C
Sbjct: 1542 ILVAPNDNEDWFCRVC 1557
>gi|443716725|gb|ELU08116.1| hypothetical protein CAPTEDRAFT_218889 [Capitella teleta]
Length = 93
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 380 ACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAP----QCEALKNTFFECKRSLLDNR 435
AC G R DL+ CL+++DCV D K+P+ CL G P +C AL+ +FF+CKRSL+D R
Sbjct: 25 ACQGLREDLRECLMQSDCVIKDGKSPKDCLLMGRHPSVPDRCHALRQSFFDCKRSLIDMR 84
Query: 436 TRFRGHKGY 444
TRFRG KGY
Sbjct: 85 TRFRGRKGY 93
>gi|432089118|gb|ELK23198.1| hypothetical protein MDA_GLEAN10009852 [Myotis davidii]
Length = 74
Score = 80.9 bits (198), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/65 (63%), Positives = 50/65 (76%), Gaps = 3/65 (4%)
Query: 380 ACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRTRFR 439
ACAG + DL CLL++ CV + K+PRQCL+EG C ALKN+FFECKRS+LD R+RFR
Sbjct: 13 ACAGVKEDLGACLLQSHCVLQEGKSPRQCLKEG---NCRALKNSFFECKRSMLDARSRFR 69
Query: 440 GHKGY 444
G KGY
Sbjct: 70 GRKGY 74
>gi|346466309|gb|AEO32999.1| hypothetical protein [Amblyomma maculatum]
Length = 128
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 368 FERDPSELVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLRE---GLAPQCEALKNTF 424
+ + S L AC G + DLK CLL TDCV+ + TP++CLR + +C LK F
Sbjct: 49 YTEEGSALAPHKACEGVKDDLKRCLLATDCVKKEMLTPKECLRVHHPSIPLECHNLKTLF 108
Query: 425 FECKRSLLDNRTRFRGHKGY 444
FECKRS+LDNR RFRG KGY
Sbjct: 109 FECKRSMLDNRQRFRGRKGY 128
>gi|56118949|ref|NP_001008216.1| cytochrome c oxidase assembly factor 5 [Homo sapiens]
gi|397469045|ref|XP_003806175.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Pan
paniscus]
gi|410035468|ref|XP_003949912.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Pan
troglodytes]
gi|426336537|ref|XP_004031525.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Gorilla
gorilla gorilla]
gi|74727729|sp|Q86WW8.1|COA5_HUMAN RecName: Full=Cytochrome c oxidase assembly factor 5
gi|28839514|gb|AAH47722.1| Chromosome 2 open reading frame 64 [Homo sapiens]
gi|62702307|gb|AAX93231.1| unknown [Homo sapiens]
gi|119622308|gb|EAX01903.1| hypothetical protein MGC52110 [Homo sapiens]
gi|313882312|gb|ADR82642.1| chromosome 2 open reading frame 64 [synthetic construct]
gi|410209906|gb|JAA02172.1| chromosome 2 open reading frame 64 [Pan troglodytes]
gi|410258422|gb|JAA17178.1| chromosome 2 open reading frame 64 [Pan troglodytes]
Length = 74
Score = 80.5 bits (197), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/65 (63%), Positives = 49/65 (75%), Gaps = 3/65 (4%)
Query: 380 ACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRTRFR 439
ACAG + DL CLL++DCV + K+PRQCL+EG C +LK FFECKRS+LDNR RFR
Sbjct: 13 ACAGLKEDLGACLLQSDCVVQEGKSPRQCLKEGY---CNSLKYAFFECKRSVLDNRARFR 69
Query: 440 GHKGY 444
G KGY
Sbjct: 70 GRKGY 74
>gi|442754685|gb|JAA69502.1| Putative cytochrome c oxidase assembly protein [Ixodes ricinus]
Length = 83
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 379 SACAGSRADLKLCLLETDCVQVDRKTPRQCLREGL--APQ-CEALKNTFFECKRSLLDNR 435
S+C G R DLK CLL TDCV++D +P++C+ PQ C LKN FECKRSLLDNR
Sbjct: 15 SSCEGVRDDLKRCLLATDCVKLDGLSPKKCILTSHPSVPQECHNLKNLLFECKRSLLDNR 74
Query: 436 TRFRGHKGY 444
RFRG KGY
Sbjct: 75 QRFRGRKGY 83
>gi|308487030|ref|XP_003105711.1| hypothetical protein CRE_17917 [Caenorhabditis remanei]
gi|308255167|gb|EFO99119.1| hypothetical protein CRE_17917 [Caenorhabditis remanei]
Length = 570
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 283 DTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKC 337
DTG +VW CP C V M+GCD C+ W+HW CVGL AEP S W+CP+C
Sbjct: 489 DTGG--KVWYCPVCSVVYANDKYMVGCDKCEHWFHWDCVGLTAEPSDSKWYCPRC 541
>gi|263359642|gb|ACY70478.1| hypothetical protein DVIR88_6g0015 [Drosophila virilis]
Length = 1576
Score = 79.7 bits (195), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/57 (61%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 282 YDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKC 337
Y D ++WICPACG DDGS MIGCDGCDAWYHW CVG++ P + DWFC C
Sbjct: 1502 YVDADGYRIWICPACGKVDDGS-AMIGCDGCDAWYHWTCVGILVAPNDNEDWFCRVC 1557
>gi|393908774|gb|EJD75204.1| hypothetical protein LOAG_17614 [Loa loa]
Length = 413
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 118/243 (48%), Gaps = 51/243 (20%)
Query: 147 DKKDKDKIK----NKEKDKEKKVDKEKEKGKKEEKEKKEEKEFK-MKEDKEK---PVEKI 198
DKK ++K++ + ++ K K VDK++E+GK EK+ K +E + + E KEK E+
Sbjct: 151 DKKHREKLEKVAGSGQRRKRKSVDKDEERGKGAEKDVKNTRERRCLSESKEKEKHHSERT 210
Query: 199 RKEEKDSEKEKKSKDKDKKLK-------KEKLKKKKKEKERSSHEKEVIPKLTF------ 245
EEK + K+ KDK+K+ K + + K KE E+ S E E L+
Sbjct: 211 VVEEKVKGRNKELKDKEKRKKHSGGRDKEHSIGKSIKEIEKLSGEDESFGSLSNVRTKNS 270
Query: 246 ---KFGTDM--------------------EEKTKRESSPKIVIKPVKSPSPPPVAAADE- 281
+ D+ E+ +KR S+ + + S + V + D+
Sbjct: 271 GKNEVTRDLNNSHLPYDSVQKPERVMYAKEQLSKRCSADSDIFESGSSTADSLVKSLDKK 330
Query: 282 ---YDTGDS-KQVWICPACGVQD-DGSLPMIGCDGCDAWYHWVCVG-LVAEPETSDWFCP 335
D+ DS +WICP C V +G+ M+GCD CD W+HW CVG LVA P+ + W+C
Sbjct: 331 SATLDSDDSLDTMWICPECSVAYVEGATDMVGCDACDNWFHWSCVGLLVAPPDDAPWYCQ 390
Query: 336 KCS 338
C+
Sbjct: 391 NCA 393
>gi|443723916|gb|ELU12135.1| hypothetical protein CAPTEDRAFT_175820 [Capitella teleta]
Length = 253
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 286 DSKQV-WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSK 339
+S Q+ WICP C DDGS PMIGCD CD WYHW CVG+ EP W+C +C++
Sbjct: 163 ESGQITWICPTCKKADDGS-PMIGCDNCDDWYHWFCVGITREPSDEQWYCVRCTR 216
>gi|327271989|ref|XP_003220769.1| PREDICTED: transcription initiation factor TFIID subunit 3-like
isoform 2 [Anolis carolinensis]
Length = 924
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL-VAEPETSDWFCPKCS 338
++WICP C DDGS PMIGCD CD WYHW CVG+ A P+ WFC +C+
Sbjct: 858 NKIWICPGCEKPDDGS-PMIGCDDCDDWYHWPCVGIKAAPPQEVQWFCSRCA 908
>gi|327271987|ref|XP_003220768.1| PREDICTED: transcription initiation factor TFIID subunit 3-like
isoform 1 [Anolis carolinensis]
Length = 937
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL-VAEPETSDWFCPKCS 338
++WICP C DDGS PMIGCD CD WYHW CVG+ A P+ WFC +C+
Sbjct: 871 NKIWICPGCEKPDDGS-PMIGCDDCDDWYHWPCVGIKAAPPQEVQWFCSRCA 921
>gi|350417379|ref|XP_003491394.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Bombus
impatiens]
Length = 83
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 3/72 (4%)
Query: 375 LVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCL--REGLAP-QCEALKNTFFECKRSL 431
L DKS CA RA LK+CLLETDC ++ R+TP+ CL R+ P +C L+ TFF+CK S+
Sbjct: 11 LKDKSKCANIRASLKMCLLETDCCKIQRRTPKDCLVSRDPSVPEECYLLRQTFFDCKHSI 70
Query: 432 LDNRTRFRGHKG 443
+D R RFRG KG
Sbjct: 71 IDGRRRFRGPKG 82
>gi|392928204|ref|NP_001257274.1| Protein TAF-3, isoform c [Caenorhabditis elegans]
gi|320202828|emb|CBZ01779.1| Protein TAF-3, isoform c [Caenorhabditis elegans]
Length = 209
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 259 SSPKIVIKPVKSPSPPPVAAADEYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHW 318
+S ++I+P+ S D + S+++WICP C V MIGCD C W+HW
Sbjct: 105 ASTPVIIRPLLSQEDD-----DSNGSESSEEIWICPVCSVAYTVGANMIGCDQCQDWFHW 159
Query: 319 VCVGLVAEPETSDWFCPKCSKVDEGSRKEKKKRGRKKKT 357
CVGL AEP S WFC +C+K + + KK G++ T
Sbjct: 160 HCVGLTAEPTDSKWFCTRCTKGN-----KSKKHGKRSAT 193
>gi|431917649|gb|ELK16914.1| Transcription initiation factor TFIID subunit 3 [Pteropus alecto]
Length = 207
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLV-AEPETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVGL+ A PE WFC KC+
Sbjct: 141 NQIWICPGCDKPDDGS-PMIGCDDCDDWYHWSCVGLMTAPPEEMQWFCNKCAN 192
>gi|113461996|ref|NP_932123.3| cytochrome c oxidase assembly factor 5 [Mus musculus]
gi|307133733|ref|NP_001182417.1| uncharacterized protein LOC503252 [Rattus norvegicus]
gi|81903189|sp|Q99M07.1|COA5_MOUSE RecName: Full=Cytochrome c oxidase assembly factor 5
gi|12805337|gb|AAH02137.1| RIKEN cDNA 6330578E17 gene [Mus musculus]
gi|74143931|dbj|BAE41270.1| unnamed protein product [Mus musculus]
gi|74177629|dbj|BAE38918.1| unnamed protein product [Mus musculus]
gi|148682575|gb|EDL14522.1| mCG13075 [Mus musculus]
gi|149046347|gb|EDL99240.1| similar to hypothetical protein MGC52110 (predicted) [Rattus
norvegicus]
Length = 74
Score = 77.8 bits (190), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/65 (60%), Positives = 49/65 (75%), Gaps = 3/65 (4%)
Query: 380 ACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRTRFR 439
ACAG + DL CLL++ CV + K+PRQCL+EG C AL+ +FFECKRS+LD R+RFR
Sbjct: 13 ACAGVKEDLGACLLQSACVLQEGKSPRQCLKEG---NCRALQYSFFECKRSMLDARSRFR 69
Query: 440 GHKGY 444
G KGY
Sbjct: 70 GRKGY 74
>gi|194319914|pdb|2K16|A Chain A, Solution Structure Of The Free Taf3 Phd Domain
gi|194319916|pdb|2K17|A Chain A, Solution Structure Of The Taf3 Phd Domain In Complex With
A H3k4me3 Peptide
Length = 75
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 287 SKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 15 GNQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 67
>gi|260806753|ref|XP_002598248.1| hypothetical protein BRAFLDRAFT_261147 [Branchiostoma floridae]
gi|229283520|gb|EEN54260.1| hypothetical protein BRAFLDRAFT_261147 [Branchiostoma floridae]
Length = 82
Score = 76.3 bits (186), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/72 (55%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 375 LVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLR--EGLAPQCEALKNTFFECKRSLL 432
L D CAG RADLK CL E+DC+ + K+ + CL+ L C A+ NTFF+CKRSL+
Sbjct: 11 LDDSRPCAGLRADLKQCLSESDCMNKEGKSAKDCLQVSSTLDQNCRAIANTFFQCKRSLV 70
Query: 433 DNRTRFRGHKGY 444
DNR RFRG KGY
Sbjct: 71 DNRNRFRGRKGY 82
>gi|449668642|ref|XP_004206835.1| PREDICTED: uncharacterized protein LOC100199050 [Hydra
magnipapillata]
Length = 525
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 287 SKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKCS 338
S ++ CP C DDGS PMIGCD CD WYHW CV + P + + WFC KC+
Sbjct: 453 SADLYYCPGCDRPDDGS-PMIGCDSCDGWYHWSCVNITVAPADDAQWFCSKCA 504
>gi|156543947|ref|XP_001607289.1| PREDICTED: uncharacterized protein C2orf64 homolog [Nasonia
vitripennis]
Length = 81
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Query: 375 LVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLRE---GLAPQCEALKNTFFECKRSL 431
L D + CA RA LK+CLL TDC ++ + TPR+CL + +C L+ TFFECKRSL
Sbjct: 10 LKDYTKCADVRAQLKMCLLNTDCCKIHKMTPRECLLSHHPSVPDECHVLRYTFFECKRSL 69
Query: 432 LDNRTRFRG 440
+D R RFRG
Sbjct: 70 MDARRRFRG 78
>gi|402594618|gb|EJW88544.1| hypothetical protein WUBG_00544 [Wuchereria bancrofti]
Length = 1408
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 282 YDTGDS-KQVWICPACGVQD-DGSLPMIGCDGCDAWYHWVCVG-LVAEPETSDWFCPKCS 338
D+ DS +WICP C V +G+ M+GCD CD W+HW CVG LVA P+ + W+C C+
Sbjct: 1329 LDSDDSLDNMWICPECSVAYVEGATDMVGCDACDNWFHWSCVGLLVAPPDDAPWYCQNCA 1388
Query: 339 K 339
+
Sbjct: 1389 R 1389
>gi|170589625|ref|XP_001899574.1| Bromodomain associated family protein [Brugia malayi]
gi|158593787|gb|EDP32382.1| Bromodomain associated family protein [Brugia malayi]
Length = 1391
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 282 YDTGDS-KQVWICPACGVQD-DGSLPMIGCDGCDAWYHWVCVG-LVAEPETSDWFCPKCS 338
D+ DS +WICP C V +G+ M+GCD CD W+HW CVG LVA P+ + W+C C+
Sbjct: 1312 LDSDDSLDNMWICPECSVAYVEGATDMVGCDACDNWFHWSCVGLLVAPPDDAPWYCQNCA 1371
Query: 339 K 339
+
Sbjct: 1372 R 1372
>gi|383863911|ref|XP_003707423.1| PREDICTED: cytochrome c oxidase assembly factor 5-like [Megachile
rotundata]
Length = 82
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%), Gaps = 3/62 (4%)
Query: 375 LVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREG---LAPQCEALKNTFFECKRSL 431
L DKS CA RADLK+C+LETDC ++ R+TP++CL+ + P+C AL+ TFFECK S+
Sbjct: 10 LKDKSRCAHLRADLKMCMLETDCCKIQRRTPKECLQSNDPSIPPECWALRQTFFECKHSI 69
Query: 432 LD 433
+D
Sbjct: 70 ID 71
>gi|268577303|ref|XP_002643633.1| Hypothetical protein CBG16376 [Caenorhabditis briggsae]
Length = 367
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 6/68 (8%)
Query: 286 DSKQVWICPACGVQ-DDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVDEGS 344
D +++WICP C V DG+ CD C W+HW CVG+ AEP S WFC +CSK ++ S
Sbjct: 292 DDEEIWICPVCSVAYTDGA----NCDQCQDWFHWHCVGITAEPTDSKWFCNRCSKGNK-S 346
Query: 345 RKEKKKRG 352
+K K+ G
Sbjct: 347 KKHGKRAG 354
>gi|332026043|gb|EGI66194.1| Uncharacterized protein C2orf64-like protein [Acromyrmex
echinatior]
gi|332026045|gb|EGI66196.1| Uncharacterized protein C2orf64-like protein [Acromyrmex
echinatior]
Length = 83
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 51/70 (72%), Gaps = 3/70 (4%)
Query: 367 RFERDPSELVDKSACAGSRADLKLCLLETDCVQVDRKTPRQCLR--EGLAP-QCEALKNT 423
+FE + L DKS CA RADLK+CLL++DC ++ ++TP++CLR + P +C AL+ T
Sbjct: 3 QFEEEGETLKDKSRCANIRADLKMCLLQSDCCKIYKRTPKECLRSHDSTVPDECFALQRT 62
Query: 424 FFECKRSLLD 433
FFECK S++D
Sbjct: 63 FFECKHSIID 72
>gi|338721492|ref|XP_003364381.1| PREDICTED: transcription initiation factor TFIID subunit 3, partial
[Equus caballus]
Length = 895
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVG 322
Q+WICP C DDGS PMIGCD CD WYHW CVG
Sbjct: 862 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVG 895
>gi|339244843|ref|XP_003378347.1| putative transcription initiation factor TFIID subunit 3
[Trichinella spiralis]
gi|316972756|gb|EFV56408.1| putative transcription initiation factor TFIID subunit 3
[Trichinella spiralis]
Length = 648
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSD-WFCPKCSKV 340
W CP C + + + M+GCDGCD W+H+ C G++ EP +++ W+C CS V
Sbjct: 558 WYCPYCFLGERKGVAMVGCDGCDNWFHYDCAGVITEPPSNEPWYCNGCSGV 608
>gi|340369448|ref|XP_003383260.1| PREDICTED: hypothetical protein LOC100636564 [Amphimedon
queenslandica]
Length = 339
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLV-AEPETSDWFCPKC 337
+V+ICP C DDG+ PMI CD CD W H CVGL A P+ WFCP C
Sbjct: 280 EVYICPICKRPDDGT-PMICCDNCDVWLHMHCVGLACAPPDNKKWFCPPC 328
>gi|340714383|ref|XP_003395708.1| PREDICTED: uncharacterized protein C2orf64 homolog [Bombus
terrestris]
Length = 83
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 3/60 (5%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCL--REGLAP-QCEALKNTFFECKRSLLD 433
DKS CA RA+LK+CLLETDC ++ R+TP+ CL R+ P +C L+ TFFECK S++D
Sbjct: 13 DKSKCATIRANLKMCLLETDCCKIQRRTPKDCLVSRDPSVPEECYLLRQTFFECKHSIID 72
>gi|403296445|ref|XP_003939120.1| PREDICTED: transcription initiation factor TFIID subunit 3 [Saimiri
boliviensis boliviensis]
Length = 743
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 55/133 (41%), Gaps = 42/133 (31%)
Query: 239 VIPKLTFKFGTDMEEKTKRESSPKIVIK-----PVKSPSPPPVAAADEYDTGDSKQVWIC 293
VIP+LT + G ++ P ++ P PS P A +G S +
Sbjct: 606 VIPRLTLRVGAGQDKXXXXAPVPLPLLAQAAAGPALLPSQGPAA------SGASAK---A 656
Query: 294 PACGV--------------------------QDDGSLPMIGCDGCDAWYHWVCVGLVAE- 326
P V DDGS PMIGCD CD WYHW CVG++A
Sbjct: 657 PVRSVVTETVSTYVIRDEWGNQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAP 715
Query: 327 PETSDWFCPKCSK 339
PE WFCPKC+
Sbjct: 716 PEEMQWFCPKCAN 728
>gi|341881443|gb|EGT37378.1| hypothetical protein CAEBREN_19314 [Caenorhabditis brenneri]
Length = 678
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWF 333
++ICP C V + + M+ CD C+ W+HW CVG+ +EP WF
Sbjct: 605 LYICPVCSVAYNHAANMVSCDKCEEWFHWHCVGITSEPTEEQWF 648
>gi|196006447|ref|XP_002113090.1| predicted protein [Trichoplax adhaerens]
gi|190585131|gb|EDV25200.1| predicted protein [Trichoplax adhaerens]
Length = 667
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 39/77 (50%), Gaps = 11/77 (14%)
Query: 271 PSPPPV---AAADEY------DTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCV 321
PS PPV A DE T S CP C + DDGS M+ CD C+ W+H+ CV
Sbjct: 576 PSLPPVYVKAIVDETISTANNATETSNSYDPCPVCHLLDDGS-SMVFCDECEKWFHFKCV 634
Query: 322 GLVAEPETSD-WFCPKC 337
GL P+ D WFC C
Sbjct: 635 GLEIAPKEEDAWFCNAC 651
>gi|326911084|ref|XP_003201892.1| PREDICTED: transcription initiation factor TFIID subunit 3-like
[Meleagris gallopavo]
Length = 911
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHW 318
Q+W CP C DDGS PMIGCD CD WYHW
Sbjct: 882 NQIWFCPGCNKPDDGS-PMIGCDDCDDWYHW 911
>gi|390340600|ref|XP_003725279.1| PREDICTED: uncharacterized protein LOC100893111 [Strongylocentrotus
purpuratus]
Length = 1497
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 74/110 (67%), Gaps = 7/110 (6%)
Query: 129 KDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKE---F 185
+DK +H+ KE E+ K+DK D+D+ K K+KD+E++ D+E E K++++E+++++E
Sbjct: 1142 RDKDSHRDKEHER---KRDK-DRDRQKEKDKDRERRKDREGESSKEKDRERRKDREKDSS 1197
Query: 186 KMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSH 235
K K+ +EK + ++ EK+S KEK +KD+ +EK K + +EK+ SH
Sbjct: 1198 KDKDRREKDRDGRKEREKESSKEKDRGEKDRSKHREKEKDRDREKKERSH 1247
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 74/111 (66%), Gaps = 2/111 (1%)
Query: 125 KSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKE--KKVDKEKEKGKKEEKEKKEE 182
KS KDK K++EK + K ++ +DKD+ K+ +DKE +K DK++++ K+++K+++
Sbjct: 1114 KSRHKDKDRDKEREKPRDKDRERHRDKDRDKDSHRDKEHERKRDKDRDRQKEKDKDRERR 1173
Query: 183 KEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERS 233
K+ + + KEK E+ + EKDS K+K ++KD+ +KE+ K+ KEK+R
Sbjct: 1174 KDREGESSKEKDRERRKDREKDSSKDKDRREKDRDGRKEREKESSKEKDRG 1224
>gi|380420333|ref|NP_001154919.2| nipped-B-like protein B [Danio rerio]
gi|408407682|sp|F1QBY1.1|NIPLB_DANRE RecName: Full=Nipped-B-like protein B
Length = 2876
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Query: 113 TSSEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKG 172
TS E +DK +++K K EK + K+ + +DK+++K++EKD+EK DKE EKG
Sbjct: 670 TSKSSRVEHNRDKEQEQEKVGDKGLEKGREKELEKGRDKERVKDQEKDQEKGRDKEVEKG 729
Query: 173 KKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKER 232
+ +E+ K KE + DKE+ + +K KD EK ++ KD+DK+L+K++ K + KE E+
Sbjct: 730 RYKERVKDRVKEQEKVRDKEQVKGRDKKRSKDLEKCRE-KDQDKELEKDREKNQDKELEK 788
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 78/115 (67%), Gaps = 3/115 (2%)
Query: 120 EIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEK 179
E++KD+ +DK+ K +EK++ K+ + ++KD+ K EK +EK DKE EKG++++++K
Sbjct: 773 ELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQDK 832
Query: 180 KEEKEFKMKEDK--EKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKER 232
+ EK + DK EK +K+R +++D +E K +DK ++ ++KL++K +EK R
Sbjct: 833 ELEKGQEKDRDKVREKDRDKVRDKDRDKVRE-KDRDKVREKDRDKLREKDREKIR 886
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 104/174 (59%), Gaps = 14/174 (8%)
Query: 62 KMKDKVSPKDKTSPKEKMSSKEKTSPKEKEYSKVKDVELGVTPMVPNIVKVTSSEDLGEI 121
K+ DK K + EK KE+ +EK+ K +D E + K E + +
Sbjct: 688 KVGDKGLEKGREKELEKGRDKERVKDQEKDQEKGRDKE---------VEKGRYKERVKDR 738
Query: 122 KKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKE 181
K++ +DK+ K ++K++ K + ++KD+ K EKD+EK DKE EKG++++++K+
Sbjct: 739 VKEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKEL 798
Query: 182 EKEFKMKEDKEKPVEKIRKEEKDSEKEK-KSKDKDKKLKK--EKLKKKKKEKER 232
EK ++D++K +EK R++++D E EK + KD+DK+L+K EK + K +EK+R
Sbjct: 799 EK--GREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDR 850
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 77/110 (70%), Gaps = 5/110 (4%)
Query: 123 KDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEE 182
+DK ++KD++ ++ KE EK ++K K+ +K + K++DKE + +EK++ K+ EK ++++
Sbjct: 770 QDKELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGREKD 829
Query: 183 KEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKER 232
++ ++++ +EK +K+R++++D K +DKD+ +EK + K +EK+R
Sbjct: 830 QDKELEKGQEKDRDKVREKDRD-----KVRDKDRDKVREKDRDKVREKDR 874
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
Query: 123 KDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEE 182
+DK ++K ++ + K +EK + K KD+DK++ K++DK ++ D++K + K EK ++ +
Sbjct: 830 QDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREKIRERD 889
Query: 183 KEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDK 216
++ ++D++K E+++ EKD EKE+ KD+DK
Sbjct: 890 RDKGREKDRDK--EQVKTREKDQEKERL-KDRDK 920
>gi|333777884|dbj|BAK23967.1| nipped-B like a [Danio rerio]
Length = 2876
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Query: 113 TSSEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKG 172
TS E +DK +++K K EK + K+ + +DK+++K++EKD+EK DKE EKG
Sbjct: 670 TSKSSRVEHNRDKEQEQEKVGDKGLEKGREKELEKGRDKERVKDQEKDQEKGRDKEVEKG 729
Query: 173 KKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKER 232
+ +E+ K KE + DKE+ + +K KD EK ++ KD+DK+L+K++ K + KE E+
Sbjct: 730 RYKERVKDRVKEQEKVRDKEQVKGRDKKRSKDLEKCRE-KDQDKELEKDREKNQDKELEK 788
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 78/115 (67%), Gaps = 3/115 (2%)
Query: 120 EIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEK 179
E++KD+ +DK+ K +EK++ K+ + ++KD+ K EK +EK DKE EKG++++++K
Sbjct: 773 ELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQDK 832
Query: 180 KEEKEFKMKEDK--EKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKER 232
+ EK + DK EK +K+R +++D +E K +DK ++ ++KL++K +EK R
Sbjct: 833 ELEKGQEKDRDKVREKDRDKVRDKDRDKVRE-KDRDKVREKDRDKLREKDREKIR 886
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 104/174 (59%), Gaps = 14/174 (8%)
Query: 62 KMKDKVSPKDKTSPKEKMSSKEKTSPKEKEYSKVKDVELGVTPMVPNIVKVTSSEDLGEI 121
K+ DK K + EK KE+ +EK+ K +D E + K E + +
Sbjct: 688 KVGDKGLEKGREKELEKGRDKERVKDQEKDQEKGRDKE---------VEKGRYKERVKDR 738
Query: 122 KKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKE 181
K++ +DK+ K ++K++ K + ++KD+ K EKD+EK DKE EKG++++++K+
Sbjct: 739 VKEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKEL 798
Query: 182 EKEFKMKEDKEKPVEKIRKEEKDSEKEK-KSKDKDKKLKK--EKLKKKKKEKER 232
EK ++D++K +EK R++++D E EK + KD+DK+L+K EK + K +EK+R
Sbjct: 799 EK--GREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDR 850
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 77/110 (70%), Gaps = 5/110 (4%)
Query: 123 KDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEE 182
+DK ++KD++ ++ KE EK ++K K+ +K + K++DKE + +EK++ K+ EK ++++
Sbjct: 770 QDKELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGREKD 829
Query: 183 KEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKER 232
++ ++++ +EK +K+R++++D K +DKD+ +EK + K +EK+R
Sbjct: 830 QDKELEKGQEKDRDKVREKDRD-----KVRDKDRDKVREKDRDKVREKDR 874
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
Query: 123 KDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEE 182
+DK ++K ++ + K +EK + K KD+DK++ K++DK ++ D++K + K EK ++ +
Sbjct: 830 QDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREKIRERD 889
Query: 183 KEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDK 216
++ ++D++K E+++ EKD EKE+ KD+DK
Sbjct: 890 RDKGREKDRDK--EQVKTREKDQEKERL-KDRDK 920
>gi|348532937|ref|XP_003453962.1| PREDICTED: nipped-B-like protein [Oreochromis niloticus]
Length = 2680
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 56/81 (69%), Gaps = 3/81 (3%)
Query: 155 KNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKE---KKS 211
+N EK+KE+ DKE+ K++E+++ +EKE DKE+ +EK ++ ++D EK ++
Sbjct: 673 RNIEKEKERDRDKERHTEKEKERDRDKEKERDRDRDKERHIEKEKERDRDKEKHIEKERD 732
Query: 212 KDKDKKLKKEKLKKKKKEKER 232
+DKD+ ++KEK + K K+++R
Sbjct: 733 RDKDRHIEKEKERDKAKDRDR 753
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 68/98 (69%), Gaps = 13/98 (13%)
Query: 123 KDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEE 182
K+++I+K+K+ + KE+ K+K+ +DK+K +++++DKE+ ++KEKE+ + +EK ++E
Sbjct: 671 KERNIEKEKERDRDKERHTEKEKERDRDKEKERDRDRDKERHIEKEKERDRDKEKHIEKE 730
Query: 183 KEFKMKEDKEKPVEKIRKEEKDSEKEK-KSKDKDKKLK 219
++ DK++ +EK EKE+ K+KD+D+K K
Sbjct: 731 RD----RDKDRHIEK--------EKERDKAKDRDRKQK 756
>gi|347441835|emb|CCD34756.1| hypothetical protein [Botryotinia fuckeliana]
Length = 983
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 306 MIGC--DGCD-AWYHWVCVGLVA-EPETSDWFCPKCSKV-DEGSRKEKKKRGRKK 355
MI C D C+ W+H CV + A P T+ W+CP C + G + E RGRK+
Sbjct: 929 MIACENDNCEKEWFHLECVEMTAVPPRTTKWYCPDCRIILGIGEKGEVNARGRKR 983
>gi|345496896|ref|XP_001600825.2| PREDICTED: hypothetical protein LOC100116294 [Nasonia vitripennis]
Length = 3272
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 306 MIGCDGCDAWYHWVCVGLVAE--PETSDWFCPKCSK 339
M+ CDGCDA YH C+ E P W+CP+CS+
Sbjct: 236 MLLCDGCDAGYHLECLDPPMEEVPLEEHWYCPECSR 271
>gi|194853276|ref|XP_001968134.1| GG24702 [Drosophila erecta]
gi|190660001|gb|EDV57193.1| GG24702 [Drosophila erecta]
Length = 5592
Score = 44.7 bits (104), Expect = 0.088, Method: Composition-based stats.
Identities = 53/198 (26%), Positives = 109/198 (55%), Gaps = 18/198 (9%)
Query: 62 KMKDKVSPKDKTSPKEKMSSKEKTSPKEKEYSKVKDVELGVTPMVPNIVKVTSSEDLGEI 121
K+ K + + ++ K K S K +S +++ S TP + + SSE
Sbjct: 1870 KLHSKHNNRSESDKKTKKSEKNASSSDKRKNSSTSQSSKSATPRIED----DSSE----- 1920
Query: 122 KKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEK-DKEKKVDKEKEKGKKEEKEKK 180
D++ K +K + + ++K +++KDK++KD K E+ +KE+K +E+ + + + +++
Sbjct: 1921 -ADETADKAEKNQRHEREKKERQEKDKREKDLRKQVEREEKERKALQEEREKEDRKAKEE 1979
Query: 181 EEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKEVI 240
E++ + K+ +E +K R+E + EKE + K++ +K +EK ++K+++ER + EKE+
Sbjct: 1980 EKEREREKKAQEDREKKEREERELREKELRDKEQKEKEIREKDLREKEQRERDNREKELR 2039
Query: 241 PKLTFKFGTDMEEKTKRE 258
K +M EK +RE
Sbjct: 2040 EK-------EMREKEQRE 2050
>gi|307204648|gb|EFN83270.1| Myosin light chain kinase, smooth muscle [Harpegnathos saltator]
Length = 9315
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 77/122 (63%), Gaps = 19/122 (15%)
Query: 123 KDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKE---- 178
+++ +KK ++ K KE++ IKK K++KD+ E K EK +G +E+KE
Sbjct: 5696 REEEVKKKEQMEKLKEEDVIKKSKERKDE----------EAK--SEKIEGMEEKKEVPGG 5743
Query: 179 KKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKE 238
K+E + KMKE E+ ++++ K +KD E KKSK++D+K K EK+ + K+E+E S ++E
Sbjct: 5744 KEETSQVKMKE--EQKMDEVEKPKKD-EAMKKSKEEDEKAKNEKIGELKREREEFSKKEE 5800
Query: 239 VI 240
VI
Sbjct: 5801 VI 5802
>gi|405973316|gb|EKC38036.1| Lysine-specific demethylase 5A [Crassostrea gigas]
Length = 1883
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 269 KSPSPPPVAAADEYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPE 328
K+P P D Y IC C + DG M+ CDGCD +H C+ + PE
Sbjct: 275 KNPGPGAYTTVDLY---------ICHMCN-RGDGEEYMLLCDGCDDAFHTYCL-IPPMPE 323
Query: 329 T--SDWFCPKC 337
DW CPKC
Sbjct: 324 VPKGDWRCPKC 334
>gi|47227297|emb|CAF96846.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2196
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Query: 306 MIGCDGCDAWYHWVCVGL------VAEPETSDWFCPKCS 338
MI CD C+ W+H CVG+ + E D+ CP C+
Sbjct: 192 MICCDRCEEWFHGDCVGITEARGRLMERNGEDYICPNCT 230
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 52/76 (68%), Gaps = 6/76 (7%)
Query: 129 KDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMK 188
KD+ + KEK++ + + +KD+D+ +NKEKD+++ +KEK++ + +EK++ +++
Sbjct: 1882 KDRDQDRSKEKDRDQDRNKEKDRDQDRNKEKDRDQDRNKEKDRDRSKEKDRDQDR----- 1936
Query: 189 EDKEKPVEKIRKEEKD 204
+KEK ++ R +EKD
Sbjct: 1937 -NKEKDRDRDRSKEKD 1951
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Query: 149 KDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKE 208
KD+D+ ++KEKD+++ +KEK++ + KEK +++ ++D+++ EK R ++++ EK+
Sbjct: 1882 KDRDQDRSKEKDRDQDRNKEKDRDQDRNKEKDRDQDRNKEKDRDRSKEKDRDQDRNKEKD 1941
Query: 209 K---KSKDKDKKLKKEKLKKKKKEKER 232
+ +SK+KD++ +E+ + + KE ER
Sbjct: 1942 RDRDRSKEKDRERSRERERSRGKEGER 1968
>gi|398410549|ref|XP_003856623.1| hypothetical protein MYCGRDRAFT_33646, partial [Zymoseptoria
tritici IPO323]
gi|339476508|gb|EGP91599.1| hypothetical protein MYCGRDRAFT_33646 [Zymoseptoria tritici IPO323]
Length = 527
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Query: 293 CPACGVQ----DDGSLPMIGCDGCDAWYHWVCVGLV---AEPETSDWFCPKCSKVDEGSR 345
C CGV DDG+ + CD C+ W H C G AE E + C C + +E ++
Sbjct: 454 CSVCGVHGENLDDGTHS-VACDRCNVWQHSKCHGFAAKQAEKEDFSFICATCRRKEEDAK 512
Query: 346 K 346
K
Sbjct: 513 K 513
>gi|189241962|ref|XP_968788.2| PREDICTED: similar to CG8677 CG8677-PA [Tribolium castaneum]
Length = 2314
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 293 CPACGVQDDGSLPMIGCDGCDAWYHWVCVG--LVAEPETSDWFCPKC 337
C CG D ++ CD CD +H C+ L+ PE DWFCP C
Sbjct: 1460 CQKCGKSDHPEWILL-CDSCDNGWHCSCLRPPLLVIPE-GDWFCPPC 1504
>gi|432859850|ref|XP_004069267.1| PREDICTED: death-inducer obliterator 1-like [Oryzias latipes]
Length = 2342
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Query: 306 MIGCDGCDAWYHWVCVGL------VAEPETSDWFCPKCS 338
MI CD C+ W+H CVG+ + E D+ CP C+
Sbjct: 229 MICCDRCEEWFHGDCVGITEVRGRLLERNGEDYICPNCT 267
>gi|270015458|gb|EFA11906.1| hypothetical protein TcasGA2_TC004063 [Tribolium castaneum]
Length = 2306
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 293 CPACGVQDDGSLPMIGCDGCDAWYHWVCVG--LVAEPETSDWFCPKCSKVDEGSRKEKKK 350
C CG D ++ CD CD +H C+ L+ PE DWFCP C S+ ++K
Sbjct: 1452 CQKCGKSDHPEWILL-CDSCDNGWHCSCLRPPLLVIPE-GDWFCPPCQHASLISKLQEKL 1509
Query: 351 RGRKKKTH 358
+ KK +
Sbjct: 1510 KEYDKKLN 1517
>gi|328872686|gb|EGG21053.1| PHD Zn finger-containing protein [Dictyostelium fasciculatum]
Length = 1031
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 279 ADEYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPET---SDWFCP 335
+D D D C C + D + MI CD CD WYH CV V+E + + C
Sbjct: 592 SDNDDASDYDNKLYC-ICRKKYDSNSFMIACDKCDEWYHGACVN-VSEKDAKRIDKYVCA 649
Query: 336 KC 337
KC
Sbjct: 650 KC 651
>gi|390596707|gb|EIN06108.1| hypothetical protein PUNSTDRAFT_145461 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 991
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 69/103 (66%), Gaps = 8/103 (7%)
Query: 143 KKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPV------E 196
++ +++K+K++ ++K+KE++ ++KEK ++ +++K EKE + +E KEK E
Sbjct: 664 RQAQEQKEKERQAQEQKEKERQAQEQKEKERQAQEQK--EKERQAQEQKEKERQAQEQKE 721
Query: 197 KIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKEV 239
K R+ ++ EKE++++++ +K ++ + +K+K+ + R EKE+
Sbjct: 722 KERQAQEQKEKERRAQEQKEKERRAQEQKEKERRAREQREKEL 764
>gi|111218572|ref|XP_001134472.1| PHD zinc finger-containing protein [Dictyostelium discoideum AX4]
gi|90970872|gb|EAS66936.1| PHD zinc finger-containing protein [Dictyostelium discoideum AX4]
Length = 1720
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 275 PVAAADEYDTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPET---SD 331
P A+ + D K C C + D + MI CD CD WYH CV ++E +
Sbjct: 1112 PDEQANSINIKDDKDRLYC-VCQKKYDKTKFMIACDRCDEWYHGDCV-YISEKDAKRIKS 1169
Query: 332 WFCPKC 337
+ C C
Sbjct: 1170 YVCANC 1175
>gi|452988209|gb|EME87964.1| hypothetical protein MYCFIDRAFT_115532, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 578
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 286 DSKQVWICPACGVQ----DDGSLPMIGCDGCDAWYHWVCVGLV---AEPETSDWFCPKCS 338
D + C CG DDGS I CD C+ W H C G AE + + C C
Sbjct: 469 DGNWYFDCSVCGQHGENMDDGSHS-IACDRCNVWQHSKCHGFTPKQAEQDDFVFICSTCK 527
Query: 339 KVDEGSRKEK 348
+ +E ++K K
Sbjct: 528 RKEEDAKKPK 537
>gi|226958545|ref|NP_666109.2| lysine-specific demethylase 5A [Mus musculus]
gi|150383496|sp|Q3UXZ9.2|KDM5A_MOUSE RecName: Full=Lysine-specific demethylase 5A; AltName: Full=Histone
demethylase JARID1A; AltName: Full=Jumonji/ARID
domain-containing protein 1A; AltName:
Full=Retinoblastoma-binding protein 2; Short=RBBP-2
Length = 1690
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPET--SDWFCPKCSKVDEGSRKE 347
+++C CG + + ++ CDGCD YH C+ L P+ DW CPKC V E K
Sbjct: 293 LYVCMFCG-RGNNEDKLLLCDGCDDSYHTFCL-LPPLPDVPKGDWRCPKC--VAEECNKP 348
Query: 348 KKKRGRKKKTHQDIIMS 364
++ G ++ + + S
Sbjct: 349 REAFGFEQAVREYTLQS 365
>gi|344253284|gb|EGW09388.1| Lysine-specific demethylase 5A [Cricetulus griseus]
Length = 1608
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPET--SDWFCPKC 337
+++C CG + + ++ CDGCD YH C+ L P+ DW CPKC
Sbjct: 211 LYVCMFCG-RGNNEDKLLLCDGCDDSYHTFCL-LPPLPDVPKGDWRCPKC 258
>gi|354476339|ref|XP_003500382.1| PREDICTED: lysine-specific demethylase 5A [Cricetulus griseus]
Length = 1671
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPET--SDWFCPKC 337
+++C CG + + ++ CDGCD YH C+ L P+ DW CPKC
Sbjct: 274 LYVCMFCG-RGNNEDKLLLCDGCDDSYHTFCL-LPPLPDVPKGDWRCPKC 321
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.309 0.129 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,726,804,158
Number of Sequences: 23463169
Number of extensions: 405247504
Number of successful extensions: 13265212
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 71400
Number of HSP's successfully gapped in prelim test: 116100
Number of HSP's that attempted gapping in prelim test: 5673555
Number of HSP's gapped (non-prelim): 2544666
length of query: 444
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 298
effective length of database: 8,933,572,693
effective search space: 2662204662514
effective search space used: 2662204662514
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 78 (34.7 bits)