BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5823
(444 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ZCK8|COA5_BOVIN Cytochrome c oxidase assembly factor 5 OS=Bos taurus GN=COA5 PE=3
SV=1
Length = 74
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 379 SACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRTRF 438
ACAG + DL LCLL++DCV + K+PRQCL+EG C+ALK +FFECKRS+LD R+RF
Sbjct: 12 GACAGVKEDLGLCLLQSDCVLKEGKSPRQCLKEG---NCKALKYSFFECKRSMLDARSRF 68
Query: 439 RGHKGY 444
RG KGY
Sbjct: 69 RGRKGY 74
>sp|Q5HZG4|TAF3_MOUSE Transcription initiation factor TFIID subunit 3 OS=Mus musculus
GN=Taf3 PE=1 SV=2
Length = 932
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 865 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 916
Score = 33.1 bits (74), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 156 NKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKD 215
+KEKDK ++ +KEKE GK+ K +E ED + KI++ E + + KD
Sbjct: 554 SKEKDKMREREKEKEAGKEL---KYPWRELMKDEDSDPYKFKIKEFEDIDAAKVRLKDGI 610
Query: 216 KKLKKEKLKKKKKEKERSSHEKE 238
+ ++EK K KKK++ERS EK+
Sbjct: 611 VRREREKHKDKKKDRERSKREKD 633
>sp|Q5VWG9|TAF3_HUMAN Transcription initiation factor TFIID subunit 3 OS=Homo sapiens
GN=TAF3 PE=1 SV=1
Length = 929
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLV-AEPETSDWFCPKCSK 339
Q+WICP C DDGS PMIGCD CD WYHW CVG++ A PE WFCPKC+
Sbjct: 863 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMTAPPEEMQWFCPKCAN 914
>sp|Q28CA1|COA5_XENTR Cytochrome c oxidase assembly factor 5 OS=Xenopus tropicalis
GN=coa5 PE=3 SV=1
Length = 75
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 52/68 (76%), Gaps = 3/68 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
DK CAG + DLK CLL+TDCV + K+P++CL+EG C+AL+ TFFECKRS+LD R
Sbjct: 11 DKHPCAGVKEDLKSCLLQTDCVLQEGKSPKECLKEGY---CKALQVTFFECKRSILDTRA 67
Query: 437 RFRGHKGY 444
RFRG KGY
Sbjct: 68 RFRGRKGY 75
>sp|Q5RFJ0|COA5_PONAB Cytochrome c oxidase assembly factor 5 OS=Pongo abelii GN=Coa5 PE=3
SV=1
Length = 74
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
Query: 379 SACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRTRF 438
AC G + DL CLLE+DCV + K+PRQCL+EG C +LK FFECKRS+LDNR RF
Sbjct: 12 GACGGLKEDLGACLLESDCVVQEGKSPRQCLKEGY---CNSLKYAFFECKRSVLDNRARF 68
Query: 439 RGHKGY 444
RG KGY
Sbjct: 69 RGRKGY 74
>sp|Q5EAW9|TAF3_XENLA Transcription initiation factor TFIID subunit 3 OS=Xenopus laevis
GN=taf3 PE=2 SV=1
Length = 845
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL-VAEPETSDWFCPKC 337
Q+WICP C DDGS PMIGCD CD WYHW CVG+ A PE WFC KC
Sbjct: 779 NQIWICPGCNKPDDGS-PMIGCDQCDDWYHWPCVGINAAPPEDEQWFCTKC 828
>sp|A1L3N6|COA5_XENLA Cytochrome c oxidase assembly factor 5 OS=Xenopus laevis GN=coa5
PE=3 SV=1
Length = 75
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
Query: 381 CAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRTRFRG 440
C G + DLK CLL++DCV + K+P++CL+EG C+AL+ TFFECKRS+LDNR RFRG
Sbjct: 15 CGGVKEDLKNCLLQSDCVLQEGKSPKECLKEG---YCKALQVTFFECKRSILDNRARFRG 71
Query: 441 HKGY 444
KGY
Sbjct: 72 RKGY 75
>sp|Q5F489|TAF3_CHICK Transcription initiation factor TFIID subunit 3 OS=Gallus gallus
GN=TAF3 PE=2 SV=1
Length = 930
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339
Q+W CP C DDGS PMIGCD CD WYHW CVG+ A PE WFC KC+
Sbjct: 864 NQIWFCPGCNKPDDGS-PMIGCDDCDDWYHWPCVGITAAPPEEMQWFCSKCAN 915
>sp|Q86WW8|COA5_HUMAN Cytochrome c oxidase assembly factor 5 OS=Homo sapiens GN=COA5 PE=1
SV=1
Length = 74
Score = 80.5 bits (197), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/65 (63%), Positives = 49/65 (75%), Gaps = 3/65 (4%)
Query: 380 ACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRTRFR 439
ACAG + DL CLL++DCV + K+PRQCL+EG C +LK FFECKRS+LDNR RFR
Sbjct: 13 ACAGLKEDLGACLLQSDCVVQEGKSPRQCLKEGY---CNSLKYAFFECKRSVLDNRARFR 69
Query: 440 GHKGY 444
G KGY
Sbjct: 70 GRKGY 74
>sp|Q99M07|COA5_MOUSE Cytochrome c oxidase assembly factor 5 OS=Mus musculus GN=Coa5 PE=2
SV=1
Length = 74
Score = 77.8 bits (190), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/65 (60%), Positives = 49/65 (75%), Gaps = 3/65 (4%)
Query: 380 ACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRTRFR 439
ACAG + DL CLL++ CV + K+PRQCL+EG C AL+ +FFECKRS+LD R+RFR
Sbjct: 13 ACAGVKEDLGACLLQSACVLQEGKSPRQCLKEG---NCRALQYSFFECKRSMLDARSRFR 69
Query: 440 GHKGY 444
G KGY
Sbjct: 70 GRKGY 74
>sp|Q0P451|COA5_DANRE Cytochrome c oxidase assembly factor 5 OS=Danio rerio GN=coa5 PE=3
SV=1
Length = 75
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 377 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDNRT 436
D AC+G R D K CLL+ DCV + K P +CL+EG C +++ FFECKRS+LD R+
Sbjct: 11 DGRACSGLREDFKACLLQHDCVVKEGKKPSECLKEG---HCRSMQVAFFECKRSMLDTRS 67
Query: 437 RFRGHKG 443
RFRG KG
Sbjct: 68 RFRGRKG 74
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 50.4 bits (119), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 90/152 (59%), Gaps = 12/152 (7%)
Query: 126 SIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEF 185
++K+ ++ +KE+E ++++++ +++K + +K++E K +E+E+ +KEE K++E+E
Sbjct: 2738 ALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELK-RQEQERLQKEEALKRQEQER 2796
Query: 186 KMKEDKEK----------PVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSH 235
KE++ K E+++KEE+ +E++ K++ LK+++ ++ +KE+E
Sbjct: 2797 LQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQ 2856
Query: 236 EKEVIPKLTFKFGTDMEE-KTKRESSPKIVIK 266
E+E + + + + K+K ES +IK
Sbjct: 2857 EQERLERKKIELAEREQHIKSKLESDMVKIIK 2888
Score = 48.1 bits (113), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 87/146 (59%), Gaps = 7/146 (4%)
Query: 120 EIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEK 179
E+K+ + + +++ ++ +KE+ K+++++ K + ++ +++++ KE+E ++E++
Sbjct: 2752 ELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERL 2811
Query: 180 KEEKEFKMKEDKE---KPVEKIRKEEKDSEKEKKSKDKDKKLKK---EKLKKKKKE-KER 232
+ EK+ ++++++E + E+++KEE +E++ K+++LK+ E+L++KK E ER
Sbjct: 2812 EREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLERKKIELAER 2871
Query: 233 SSHEKEVIPKLTFKFGTDMEEKTKRE 258
H K + K D K K E
Sbjct: 2872 EQHIKSKLESDMVKIIKDELTKEKDE 2897
Score = 43.5 bits (101), Expect = 0.003, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 84/126 (66%), Gaps = 2/126 (1%)
Query: 137 KEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVE 196
+EKE+++++K ++ K + + ++K++E++ ++KE+ K +++++ +KE ++K +++ +E
Sbjct: 2703 QEKERLEREKQEQLKKEEELRKKEQERQEQQQKEEALKRQEQERLQKEEELKRQEQERLE 2762
Query: 197 KIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKEVIPKLTFKFGTDMEEKTK 256
+ ++E+ E+E K +++++ K+E L K++E+ER E+E+ + + + +E+ +
Sbjct: 2763 REKQEQLQKEEELKRQEQERLQKEEAL--KRQEQERLQKEEELKRQEQERLEREKQEQLQ 2820
Query: 257 RESSPK 262
+E K
Sbjct: 2821 KEEELK 2826
Score = 37.4 bits (85), Expect = 0.21, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 92/136 (67%), Gaps = 6/136 (4%)
Query: 129 KDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDK-EKEKGKKEEKEKKEEKEFKM 187
++K+ +++++E++KK+++ + K++ + +++ KE+ + + E+E+ +KEE+ K++E+E ++
Sbjct: 2703 QEKERLEREKQEQLKKEEELRKKEQERQEQQQKEEALKRQEQERLQKEEELKRQEQE-RL 2761
Query: 188 KEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKEVIPKLTFKF 247
+ +K+ E+++KEE+ +E++ K++ LK+++ ++ +KE+E E+E + + +
Sbjct: 2762 EREKQ---EQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREK-QE 2817
Query: 248 GTDMEEKTKRESSPKI 263
EE+ KR+ ++
Sbjct: 2818 QLQKEEELKRQEQERL 2833
>sp|F1QBY1|NIPLB_DANRE Nipped-B-like protein B OS=Danio rerio GN=nipblb PE=2 SV=1
Length = 2876
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Query: 113 TSSEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKG 172
TS E +DK +++K K EK + K+ + +DK+++K++EKD+EK DKE EKG
Sbjct: 670 TSKSSRVEHNRDKEQEQEKVGDKGLEKGREKELEKGRDKERVKDQEKDQEKGRDKEVEKG 729
Query: 173 KKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKER 232
+ +E+ K KE + DKE+ + +K KD EK ++ KD+DK+L+K++ K + KE E+
Sbjct: 730 RYKERVKDRVKEQEKVRDKEQVKGRDKKRSKDLEKCRE-KDQDKELEKDREKNQDKELEK 788
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 78/115 (67%), Gaps = 3/115 (2%)
Query: 120 EIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEK 179
E++KD+ +DK+ K +EK++ K+ + ++KD+ K EK +EK DKE EKG++++++K
Sbjct: 773 ELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQDK 832
Query: 180 KEEKEFKMKEDK--EKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKER 232
+ EK + DK EK +K+R +++D +E K +DK ++ ++KL++K +EK R
Sbjct: 833 ELEKGQEKDRDKVREKDRDKVRDKDRDKVRE-KDRDKVREKDRDKLREKDREKIR 886
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 104/174 (59%), Gaps = 14/174 (8%)
Query: 62 KMKDKVSPKDKTSPKEKMSSKEKTSPKEKEYSKVKDVELGVTPMVPNIVKVTSSEDLGEI 121
K+ DK K + EK KE+ +EK+ K +D E + K E + +
Sbjct: 688 KVGDKGLEKGREKELEKGRDKERVKDQEKDQEKGRDKE---------VEKGRYKERVKDR 738
Query: 122 KKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKE 181
K++ +DK+ K ++K++ K + ++KD+ K EKD+EK DKE EKG++++++K+
Sbjct: 739 VKEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKEL 798
Query: 182 EKEFKMKEDKEKPVEKIRKEEKDSEKEK-KSKDKDKKLKK--EKLKKKKKEKER 232
EK ++D++K +EK R++++D E EK + KD+DK+L+K EK + K +EK+R
Sbjct: 799 EK--GREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDR 850
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 77/110 (70%), Gaps = 5/110 (4%)
Query: 123 KDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEE 182
+DK ++KD++ ++ KE EK ++K K+ +K + K++DKE + +EK++ K+ EK ++++
Sbjct: 770 QDKELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGREKD 829
Query: 183 KEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKER 232
++ ++++ +EK +K+R++++D K +DKD+ +EK + K +EK+R
Sbjct: 830 QDKELEKGQEKDRDKVREKDRD-----KVRDKDRDKVREKDRDKVREKDR 874
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
Query: 123 KDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEE 182
+DK ++K ++ + K +EK + K KD+DK++ K++DK ++ D++K + K EK ++ +
Sbjct: 830 QDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREKIRERD 889
Query: 183 KEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDK 216
++ ++D++K E+++ EKD EKE+ KD+DK
Sbjct: 890 RDKGREKDRDK--EQVKTREKDQEKERL-KDRDK 920
Score = 36.2 bits (82), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 64/89 (71%), Gaps = 8/89 (8%)
Query: 123 KDKSIKKDKKTHKKKEKEKIKKK-KDK-KDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKK 180
+DK +KD+ + K+++K+++K +DK ++KD+ K +EKD+EK +++++KG++++++K+
Sbjct: 842 RDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREKIRERDRDKGREKDRDKE 901
Query: 181 EEKEFKMKEDKEKPVEKIRKEEKDSEKEK 209
+ K +EK EK R +++D E+EK
Sbjct: 902 QVKT------REKDQEKERLKDRDKEREK 924
>sp|A2R7P5|NST1_ASPNC Stress response protein nst1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=nst1 PE=3 SV=1
Length = 1201
Score = 38.9 bits (89), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Query: 135 KKKEKEKIKKKKDKKDKDKIK-NKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEK 193
+K+E++K K++ ++K ++ + KE +K+K++ +E+E+ + E++++E+KE + K +E
Sbjct: 596 RKREEQKKKREAERKAQEAERLRKEAEKQKRLREERERQAEIERKQREQKELEKKRREEA 655
Query: 194 PVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKEV 239
++R+++ E+E+K ++ K E +K+ + +R SH V
Sbjct: 656 RQNELREKKTKDERERKLREAAPKTDYEGQEKRDPQAKRVSHTGPV 701
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 67/120 (55%), Gaps = 11/120 (9%)
Query: 155 KNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDK 214
+ K ++++KK + E++ + E K+ EK+ +++E++E+ E RK+ + E EKK +++
Sbjct: 595 RRKREEQKKKREAERKAQEAERLRKEAEKQKRLREERERQAEIERKQREQKELEKKRREE 654
Query: 215 DKKLKKEKLKKKKKEKERSSHEKEVIPKLTFKFGTDMEEKTKRESSPKIV--IKPVKSPS 272
++ +L++KK + ER +E PK TD E + KR+ K V PV P+
Sbjct: 655 ---ARQNELREKKTKDERERKLREAAPK------TDYEGQEKRDPQAKRVSHTGPVPIPA 705
>sp|Q3UXZ9|KDM5A_MOUSE Lysine-specific demethylase 5A OS=Mus musculus GN=Kdm5a PE=1 SV=2
Length = 1690
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPET--SDWFCPKCSKVDEGSRKE 347
+++C CG + + ++ CDGCD YH C+ L P+ DW CPKC V E K
Sbjct: 293 LYVCMFCG-RGNNEDKLLLCDGCDDSYHTFCL-LPPLPDVPKGDWRCPKC--VAEECNKP 348
Query: 348 KKKRGRKKKTHQDIIMS 364
++ G ++ + + S
Sbjct: 349 REAFGFEQAVREYTLQS 365
>sp|C0H5F4|RBP2B_PLAF7 Reticulocyte binding protein 2 homolog b OS=Plasmodium falciparum
(isolate 3D7) GN=Rh2b PE=3 SV=1
Length = 3179
Score = 37.0 bits (84), Expect = 0.29, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 137 KEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEK-KEEKEFKMKEDKEKPV 195
+EKE+++++K ++ K + K++ + ++ +++E K++E+E+ ++E+E K +E +
Sbjct: 2628 QEKERLEREKQEQLKKEALKKQEQERQEQQQKEEALKRQEQERLQKEEELKRQEQERLER 2687
Query: 196 EKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKK 228
EK + +K+ E KK ++K ++ ++L+++KK
Sbjct: 2688 EKQEQLQKEEELRKKEQEKQQQRNIQELEEQKK 2720
Score = 33.1 bits (74), Expect = 4.2, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 62/83 (74%), Gaps = 2/83 (2%)
Query: 158 EKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKK 217
E++K++++ KE K +++E++++++KE +K +++ ++K +E K E+E+ ++K ++
Sbjct: 2634 EREKQEQLKKEALKKQEQERQEQQQKEEALKRQEQERLQK-EEELKRQEQERLEREKQEQ 2692
Query: 218 LKKEK-LKKKKKEKERSSHEKEV 239
L+KE+ L+KK++EK++ + +E+
Sbjct: 2693 LQKEEELRKKEQEKQQQRNIQEL 2715
>sp|P29375|KDM5A_HUMAN Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3
Length = 1690
Score = 37.0 bits (84), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPET--SDWFCPKC 337
+++C CG + + ++ CDGCD YH C+ + P+ DW CPKC
Sbjct: 293 LYVCMFCG-RGNNEDKLLLCDGCDDSYHTFCL-IPPLPDVPKGDWRCPKC 340
>sp|Q8SX83|SPEN_DROME Protein split ends OS=Drosophila melanogaster GN=spen PE=1 SV=2
Length = 5560
Score = 35.4 bits (80), Expect = 1.0, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 61/99 (61%), Gaps = 11/99 (11%)
Query: 140 EKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVEKIR 199
+K +K+K+ ++KD +EK++ ++ ++EKE K+ + EKE + KE +EK ++
Sbjct: 1997 DKEQKEKEIREKDL---REKEQRERDNREKELRDKDLR----EKEMREKEQREK---ELH 2046
Query: 200 KEEKDSEKEKKSKDKDKK-LKKEKLKKKKKEKERSSHEK 237
+E+ E+E + K++ ++ + E+ + + +E SS++K
Sbjct: 2047 REKDQREREHREKEQSRRAMDVEQEGRGGRMRELSSYQK 2085
Score = 34.7 bits (78), Expect = 1.7, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 122 KKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKE 181
+K+K I+ +K +K+++E+ ++K+ +DKD + + ++KE++ + + + E+E +E
Sbjct: 2000 QKEKEIR-EKDLREKEQRERDNREKELRDKDLREKEMREKEQREKELHREKDQREREHRE 2058
Query: 182 EKEFKMKEDKEKPVEKIRKEEKDSEKEKK 210
+++ + D E+ R E S ++ K
Sbjct: 2059 KEQSRRAMDVEQEGRGGRMRELSSYQKSK 2087
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.129 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 189,399,865
Number of Sequences: 539616
Number of extensions: 10133856
Number of successful extensions: 361728
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 5033
Number of HSP's successfully gapped in prelim test: 5825
Number of HSP's that attempted gapping in prelim test: 96177
Number of HSP's gapped (non-prelim): 91556
length of query: 444
length of database: 191,569,459
effective HSP length: 121
effective length of query: 323
effective length of database: 126,275,923
effective search space: 40787123129
effective search space used: 40787123129
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)