Query psy5823
Match_columns 444
No_of_seqs 300 out of 1296
Neff 4.8
Searched_HMMs 29240
Date Fri Aug 16 18:52:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5823.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5823hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lv9_A Histone-lysine N-methyl 99.4 6.5E-14 2.2E-18 118.2 5.5 62 286-349 24-85 (98)
2 2k16_A Transcription initiatio 99.4 8.3E-14 2.8E-18 111.4 2.5 55 285-340 13-68 (75)
3 1weu_A Inhibitor of growth fam 99.4 1.4E-12 4.6E-17 109.2 8.7 53 284-340 30-85 (91)
4 1wee_A PHD finger family prote 99.3 3.8E-13 1.3E-17 107.2 3.8 56 284-340 10-66 (72)
5 3o70_A PHD finger protein 13; 99.3 4.3E-13 1.5E-17 106.3 2.7 52 286-339 15-66 (68)
6 2jmi_A Protein YNG1, ING1 homo 99.3 3.1E-13 1.1E-17 112.9 0.6 49 287-339 23-75 (90)
7 1wew_A DNA-binding family prot 99.3 9.6E-13 3.3E-17 106.5 3.0 54 285-340 11-72 (78)
8 1we9_A PHD finger family prote 99.3 9E-13 3.1E-17 102.3 2.6 52 289-340 5-58 (64)
9 1wen_A Inhibitor of growth fam 99.3 4.2E-12 1.4E-16 101.5 6.3 53 284-340 10-65 (71)
10 3kqi_A GRC5, PHD finger protei 99.3 2.6E-13 8.9E-18 109.0 -0.8 55 286-341 6-62 (75)
11 1wem_A Death associated transc 99.3 3.3E-13 1.1E-17 108.3 -0.2 51 289-341 15-71 (76)
12 1wep_A PHF8; structural genomi 99.3 1.7E-12 5.8E-17 105.1 3.3 53 288-341 10-64 (79)
13 3o7a_A PHD finger protein 13 v 99.3 1E-12 3.4E-17 98.7 1.6 47 290-338 4-50 (52)
14 2rsd_A E3 SUMO-protein ligase 99.2 2.3E-12 7.9E-17 101.7 2.2 51 287-339 7-64 (68)
15 1x4i_A Inhibitor of growth pro 99.1 1.1E-11 3.7E-16 98.9 2.6 49 288-340 4-55 (70)
16 3c6w_A P28ING5, inhibitor of g 99.1 7.5E-12 2.6E-16 96.6 1.2 49 287-339 6-57 (59)
17 2kgg_A Histone demethylase jar 99.1 7E-12 2.4E-16 94.1 0.9 48 291-338 3-52 (52)
18 2g6q_A Inhibitor of growth pro 99.1 9.2E-12 3.2E-16 97.1 1.3 50 286-339 7-59 (62)
19 1f62_A Transcription factor WS 99.1 3.3E-11 1.1E-15 89.6 3.5 47 292-339 2-49 (51)
20 2vnf_A ING 4, P29ING4, inhibit 99.1 1.2E-11 4.2E-16 95.6 1.1 50 286-339 6-58 (60)
21 2vpb_A Hpygo1, pygopus homolog 99.1 8E-12 2.8E-16 98.3 0.0 50 289-338 7-64 (65)
22 2l5u_A Chromodomain-helicase-D 99.0 2.5E-10 8.4E-15 88.4 3.5 48 289-340 10-58 (61)
23 2ri7_A Nucleosome-remodeling f 99.0 5.9E-11 2E-15 108.0 -0.0 51 289-340 7-59 (174)
24 2e6r_A Jumonji/ARID domain-con 99.0 1.9E-10 6.4E-15 96.0 2.9 49 290-339 16-65 (92)
25 3kv5_D JMJC domain-containing 99.0 4.4E-11 1.5E-15 125.9 -1.3 56 286-342 33-90 (488)
26 2xb1_A Pygopus homolog 2, B-ce 99.0 1E-10 3.4E-15 99.9 0.9 52 290-341 3-62 (105)
27 1mm2_A MI2-beta; PHD, zinc fin 98.9 5.8E-10 2E-14 86.3 4.8 48 289-340 8-56 (61)
28 1xwh_A Autoimmune regulator; P 98.9 2.4E-10 8.3E-15 89.6 1.6 47 290-340 8-55 (66)
29 2yql_A PHD finger protein 21A; 98.9 4.6E-10 1.6E-14 85.3 2.9 46 289-338 8-54 (56)
30 2yt5_A Metal-response element- 98.9 2.8E-10 9.7E-15 88.6 1.8 52 289-341 5-62 (66)
31 2lri_C Autoimmune regulator; Z 98.9 1.5E-09 5.3E-14 85.5 4.8 46 291-340 13-59 (66)
32 2l43_A N-teminal domain from h 98.9 5.4E-10 1.9E-14 92.6 2.3 49 290-340 25-75 (88)
33 3asl_A E3 ubiquitin-protein li 98.9 1.1E-09 3.7E-14 87.2 3.6 48 291-339 19-68 (70)
34 2ku3_A Bromodomain-containing 98.8 6.3E-10 2.2E-14 88.9 1.9 48 290-339 16-65 (71)
35 2puy_A PHD finger protein 21A; 98.8 9.5E-10 3.2E-14 84.5 2.3 46 290-339 5-51 (60)
36 2e6s_A E3 ubiquitin-protein li 98.8 2.2E-09 7.5E-14 87.0 4.4 48 291-339 27-76 (77)
37 3kv4_A PHD finger protein 8; e 98.8 2.1E-10 7.3E-15 119.5 -2.6 54 289-343 4-59 (447)
38 3u5n_A E3 ubiquitin-protein li 98.8 2.4E-09 8.1E-14 100.5 3.6 48 290-341 7-55 (207)
39 1wev_A Riken cDNA 1110020M19; 98.8 1.6E-09 5.3E-14 89.7 1.8 51 289-340 15-72 (88)
40 3lqh_A Histone-lysine N-methyl 98.7 1.4E-09 4.9E-14 101.2 0.9 52 292-343 4-66 (183)
41 1fp0_A KAP-1 corepressor; PHD 98.7 1.5E-08 5.1E-13 84.3 5.5 47 290-340 25-72 (88)
42 3shb_A E3 ubiquitin-protein li 98.7 7.4E-09 2.5E-13 84.0 3.2 49 290-339 26-76 (77)
43 3o36_A Transcription intermedi 98.6 1.4E-08 4.6E-13 93.5 4.3 47 291-341 5-52 (184)
44 3ask_A E3 ubiquitin-protein li 98.6 1.2E-08 4E-13 98.0 4.0 49 290-339 174-224 (226)
45 2kwj_A Zinc finger protein DPF 98.6 1.4E-08 4.7E-13 87.4 2.3 47 292-339 60-107 (114)
46 3v43_A Histone acetyltransfera 98.5 6.1E-08 2.1E-12 83.1 4.6 47 292-339 63-111 (112)
47 4gne_A Histone-lysine N-methyl 98.5 6.6E-08 2.3E-12 83.0 3.4 44 290-338 15-60 (107)
48 2ysm_A Myeloid/lymphoid or mix 98.5 5.7E-08 2E-12 82.6 2.7 49 292-341 56-105 (111)
49 2ro1_A Transcription intermedi 98.4 1E-07 3.5E-12 88.6 4.0 47 291-341 3-50 (189)
50 3pur_A Lysine-specific demethy 98.3 1.5E-07 5.2E-12 99.6 2.6 46 296-341 48-95 (528)
51 2ysm_A Myeloid/lymphoid or mix 98.1 2.4E-06 8.3E-11 72.5 4.4 47 291-338 8-55 (111)
52 2lbm_A Transcriptional regulat 98.0 2.9E-06 9.9E-11 76.2 2.9 49 289-341 62-118 (142)
53 2ku7_A MLL1 PHD3-CYP33 RRM chi 97.8 4.3E-06 1.5E-10 71.2 0.9 37 306-342 2-46 (140)
54 3rsn_A SET1/ASH2 histone methy 97.8 1.5E-05 5E-10 74.0 4.5 51 290-341 5-60 (177)
55 3v43_A Histone acetyltransfera 97.6 1.5E-05 5E-10 68.2 0.8 47 291-338 6-62 (112)
56 4bbq_A Lysine-specific demethy 97.5 2.7E-05 9.3E-10 66.3 2.2 49 293-341 62-115 (117)
57 3ql9_A Transcriptional regulat 97.5 2.4E-05 8.2E-10 69.2 1.5 49 289-341 56-112 (129)
58 2kwj_A Zinc finger protein DPF 97.3 3.2E-05 1.1E-09 66.4 0.1 46 292-338 3-59 (114)
59 1wil_A KIAA1045 protein; ring 96.2 0.003 1E-07 52.2 3.5 48 291-340 16-76 (89)
60 3a1b_A DNA (cytosine-5)-methyl 92.7 0.036 1.2E-06 50.5 1.7 49 290-342 79-136 (159)
61 2pv0_B DNA (cytosine-5)-methyl 91.9 0.046 1.6E-06 56.1 1.4 50 288-341 91-149 (386)
62 2ysl_A Tripartite motif-contai 88.7 0.42 1.4E-05 36.0 4.0 48 290-341 20-67 (73)
63 1iym_A EL5; ring-H2 finger, ub 86.7 0.47 1.6E-05 33.9 3.1 47 291-340 6-52 (55)
64 2ect_A Ring finger protein 126 86.5 0.57 1.9E-05 35.9 3.6 48 290-341 15-62 (78)
65 2kiz_A E3 ubiquitin-protein li 85.6 0.25 8.5E-06 37.1 1.1 48 290-341 14-61 (69)
66 2ecj_A Tripartite motif-contai 82.7 1.1 3.6E-05 32.1 3.5 44 290-337 15-58 (58)
67 2ct0_A Non-SMC element 1 homol 82.4 1.1 3.7E-05 35.6 3.6 48 288-339 13-60 (74)
68 2ysj_A Tripartite motif-contai 82.2 0.59 2E-05 34.4 1.9 44 290-337 20-63 (63)
69 2ct2_A Tripartite motif protei 82.0 0.6 2.1E-05 36.3 2.0 51 290-341 15-66 (88)
70 2lq6_A Bromodomain-containing 81.9 0.87 3E-05 37.2 3.0 31 289-321 16-48 (87)
71 2d8s_A Cellular modulator of i 81.5 0.93 3.2E-05 36.2 3.0 50 292-342 17-69 (80)
72 2e61_A Zinc finger CW-type PWW 78.7 1.7 5.8E-05 34.3 3.6 32 304-336 16-49 (69)
73 2l0b_A E3 ubiquitin-protein li 77.1 0.83 2.8E-05 36.6 1.4 47 290-340 40-86 (91)
74 2ecm_A Ring finger and CHY zin 76.8 0.73 2.5E-05 32.7 0.9 47 291-340 6-52 (55)
75 2l7p_A Histone-lysine N-methyl 75.9 0.73 2.5E-05 39.0 0.8 31 305-336 27-58 (100)
76 1weq_A PHD finger protein 7; s 75.3 2.9 9.9E-05 34.3 4.2 35 305-341 45-80 (85)
77 1x4j_A Ring finger protein 38; 75.3 0.79 2.7E-05 35.0 0.8 48 290-341 23-70 (75)
78 2d8t_A Dactylidin, ring finger 74.5 2.1 7E-05 32.3 3.0 45 290-341 15-59 (71)
79 1vyx_A ORF K3, K3RING; zinc-bi 74.3 0.5 1.7E-05 35.8 -0.6 48 291-341 7-57 (60)
80 2ep4_A Ring finger protein 24; 74.2 1.2 4.1E-05 33.7 1.5 47 291-341 16-62 (74)
81 3k1l_B Fancl; UBC, ring, RWD, 72.0 2.4 8.3E-05 43.3 3.6 52 289-340 307-370 (381)
82 1v87_A Deltex protein 2; ring- 71.8 1.3 4.5E-05 36.3 1.4 51 292-342 27-93 (114)
83 2ecy_A TNF receptor-associated 69.4 2.8 9.5E-05 31.0 2.6 47 289-341 14-60 (66)
84 2ecv_A Tripartite motif-contai 69.2 2.5 8.4E-05 32.2 2.3 48 290-341 19-69 (85)
85 2csy_A Zinc finger protein 183 69.2 1.2 4.1E-05 34.5 0.5 45 290-341 15-59 (81)
86 2egp_A Tripartite motif-contai 67.4 5.1 0.00018 30.2 3.8 48 290-341 12-63 (79)
87 2ecw_A Tripartite motif-contai 64.2 4.9 0.00017 30.5 3.1 48 290-341 19-69 (85)
88 4gne_A Histone-lysine N-methyl 63.0 5.7 0.0002 33.6 3.6 38 292-334 60-98 (107)
89 1v5n_A PDI-like hypothetical p 61.4 3.9 0.00013 33.3 2.2 34 291-326 48-81 (89)
90 1e8j_A Rubredoxin; iron-sulfur 60.6 7.3 0.00025 28.9 3.4 42 291-340 4-45 (52)
91 1jm7_A BRCA1, breast cancer ty 60.5 2.3 7.9E-05 34.5 0.7 48 290-341 21-68 (112)
92 2ecl_A Ring-box protein 2; RNF 59.8 2.1 7.2E-05 33.5 0.3 32 306-340 42-73 (81)
93 2yur_A Retinoblastoma-binding 59.6 3.6 0.00012 31.3 1.6 48 289-340 14-61 (74)
94 3nw0_A Non-structural maintena 56.1 5.4 0.00019 37.9 2.5 46 290-339 180-225 (238)
95 1e4u_A Transcriptional repress 55.2 9 0.00031 30.1 3.3 49 291-342 12-61 (78)
96 1bor_A Transcription factor PM 54.7 10 0.00035 27.4 3.3 42 290-341 6-47 (56)
97 2ea6_A Ring finger protein 4; 54.2 2.6 9E-05 30.9 -0.0 47 290-340 15-65 (69)
98 3dpl_R Ring-box protein 1; ubi 51.8 3.4 0.00011 34.6 0.3 31 307-340 68-98 (106)
99 4a0k_B E3 ubiquitin-protein li 50.8 3.8 0.00013 35.1 0.4 28 310-340 82-109 (117)
100 2kn9_A Rubredoxin; metalloprot 49.7 8.7 0.0003 31.2 2.4 44 289-340 26-69 (81)
101 3l11_A E3 ubiquitin-protein li 49.5 11 0.00036 30.9 3.0 47 290-342 15-61 (115)
102 4ayc_A E3 ubiquitin-protein li 48.3 5.3 0.00018 34.1 0.9 43 292-341 55-97 (138)
103 2djb_A Polycomb group ring fin 47.7 6.2 0.00021 29.7 1.2 47 289-341 14-60 (72)
104 4rxn_A Rubredoxin; electron tr 46.6 11 0.00037 28.3 2.3 14 327-340 32-45 (54)
105 2ckl_B Ubiquitin ligase protei 46.3 4.2 0.00014 35.7 -0.0 47 290-341 54-100 (165)
106 1dx8_A Rubredoxin; electron tr 45.2 12 0.0004 29.5 2.4 43 290-340 7-49 (70)
107 2e2z_A TIM15; protein import, 44.7 4.4 0.00015 34.3 -0.1 27 290-316 13-48 (100)
108 1s24_A Rubredoxin 2; electron 44.0 8.7 0.0003 31.6 1.5 43 289-339 34-76 (87)
109 3lrq_A E3 ubiquitin-protein li 43.2 3.6 0.00012 33.3 -0.9 47 290-341 22-68 (100)
110 2enn_A NPKC-theta, protein kin 40.8 16 0.00056 28.5 2.7 35 289-323 33-68 (77)
111 3fl2_A E3 ubiquitin-protein li 40.2 5.2 0.00018 33.3 -0.4 45 291-341 53-97 (124)
112 2jwo_A RAG-2, V(D)J recombinat 39.9 18 0.0006 29.3 2.7 52 285-336 7-75 (82)
113 1t1h_A Gspef-atpub14, armadill 39.4 9 0.00031 29.0 0.9 45 290-340 8-52 (78)
114 1weo_A Cellulose synthase, cat 39.2 6.6 0.00023 32.7 0.1 48 291-341 17-68 (93)
115 2yuu_A NPKC-delta, protein kin 38.6 19 0.00066 28.4 2.8 34 290-323 28-62 (83)
116 2v3b_B Rubredoxin 2, rubredoxi 38.0 13 0.00044 27.9 1.6 14 327-340 32-45 (55)
117 4bbq_A Lysine-specific demethy 37.9 4.6 0.00016 33.7 -1.0 33 292-338 9-41 (117)
118 2fiy_A Protein FDHE homolog; F 37.8 9.4 0.00032 37.8 1.0 40 290-340 182-231 (309)
119 1yk4_A Rubredoxin, RD; electro 37.5 15 0.00051 27.2 1.8 14 327-340 31-44 (52)
120 2a20_A Regulating synaptic mem 37.4 11 0.00036 29.2 1.0 50 291-340 10-60 (62)
121 1ptq_A Protein kinase C delta 36.9 16 0.00056 25.6 1.9 34 290-323 11-45 (50)
122 2ecn_A Ring finger protein 141 34.2 9.6 0.00033 28.2 0.3 42 290-339 15-56 (70)
123 2ckl_A Polycomb group ring fin 34.0 10 0.00035 30.8 0.4 46 290-341 15-60 (108)
124 2pk7_A Uncharacterized protein 33.9 19 0.00064 28.2 2.0 29 289-317 7-37 (69)
125 2jr6_A UPF0434 protein NMA0874 33.4 18 0.00061 28.2 1.7 30 289-318 7-38 (68)
126 2y43_A E3 ubiquitin-protein li 33.3 11 0.00037 30.0 0.5 46 290-341 22-67 (99)
127 2enz_A NPKC-theta, protein kin 33.2 28 0.00095 26.2 2.8 34 290-323 23-57 (65)
128 1faq_A RAF-1; transferase, ser 32.9 27 0.00092 24.8 2.5 31 290-323 14-44 (52)
129 2js4_A UPF0434 protein BB2007; 32.8 16 0.00055 28.7 1.4 30 289-318 7-38 (70)
130 1chc_A Equine herpes virus-1 r 32.4 10 0.00034 27.9 0.1 45 291-341 6-50 (68)
131 3ztg_A E3 ubiquitin-protein li 32.3 17 0.00057 28.4 1.5 47 290-340 13-59 (92)
132 2hf1_A Tetraacyldisaccharide-1 31.8 17 0.00058 28.4 1.4 29 289-317 7-37 (68)
133 1hp8_A HU-P8; leukemia, cystei 31.7 49 0.0017 26.0 4.0 32 405-436 14-47 (68)
134 2eli_A Protein kinase C alpha 31.6 31 0.0011 27.4 3.0 34 290-323 28-62 (85)
135 1jm7_B BARD1, BRCA1-associated 29.6 30 0.001 28.4 2.7 44 290-341 22-65 (117)
136 2k0a_A PRE-mRNA-splicing facto 29.5 7.1 0.00024 33.3 -1.2 49 291-339 30-80 (109)
137 2fnf_X Putative RAS effector N 29.1 34 0.0012 26.6 2.7 33 289-323 34-66 (72)
138 2jny_A Uncharacterized BCR; st 29.0 23 0.00079 27.6 1.7 29 289-317 9-39 (67)
139 3ng2_A RNF4, snurf, ring finge 26.7 7.7 0.00026 28.6 -1.4 47 291-341 11-61 (71)
140 1z6u_A NP95-like ring finger p 25.8 13 0.00044 32.6 -0.4 45 291-341 79-123 (150)
141 1y8f_A UNC-13 homolog A, MUNC1 25.8 29 0.00098 26.2 1.7 34 290-323 24-58 (66)
142 2vrw_B P95VAV, VAV1, proto-onc 25.2 43 0.0015 33.2 3.3 35 289-323 356-391 (406)
143 6rxn_A Rubredoxin; electron tr 24.9 35 0.0012 24.7 1.9 13 328-340 27-39 (46)
144 1yop_A KTI11P; zinc finger, me 24.9 24 0.00081 28.7 1.1 28 288-317 21-56 (83)
145 2xeu_A Ring finger protein 4; 24.8 7.1 0.00024 28.0 -1.9 47 291-341 4-54 (64)
146 2lk0_A RNA-binding protein 5; 24.5 29 0.00098 23.1 1.3 14 329-342 3-16 (32)
147 2dmi_A Teashirt homolog 3; zin 24.5 1.2E+02 0.0041 23.5 5.3 56 290-345 19-94 (115)
148 2db6_A SH3 and cysteine rich d 24.4 17 0.00057 28.3 0.1 35 289-323 27-62 (74)
149 3uej_A NPKC-delta, protein kin 24.3 35 0.0012 25.5 1.9 34 290-323 20-54 (65)
150 1zbd_B Rabphilin-3A; G protein 24.1 40 0.0014 29.4 2.5 48 291-339 56-106 (134)
151 2jr7_A DPH3 homolog; DESR1, CS 23.6 29 0.00099 28.6 1.4 30 287-318 20-57 (89)
152 3cw2_K Translation initiation 22.4 47 0.0016 29.3 2.7 29 287-315 100-133 (139)
153 1wge_A Hypothetical protein 26 22.2 53 0.0018 26.6 2.7 29 288-318 28-64 (83)
154 2cs3_A Protein C14ORF4, MY039 21.9 34 0.0012 28.1 1.5 47 289-336 14-63 (93)
155 2xzl_A ATP-dependent helicase 21.3 38 0.0013 37.4 2.2 29 291-321 12-40 (802)
156 2k1p_A Zinc finger RAN-binding 21.0 41 0.0014 22.4 1.5 15 329-343 4-18 (33)
157 1wii_A Hypothetical UPF0222 pr 20.7 13 0.00044 30.4 -1.2 37 290-326 23-67 (85)
158 1wim_A KIAA0161 protein; ring 20.7 26 0.00088 27.7 0.5 50 290-340 5-61 (94)
159 1rfh_A RAS association (ralgds 20.4 40 0.0014 25.0 1.5 33 289-323 21-53 (59)
160 2d74_B Translation initiation 20.1 42 0.0014 30.0 1.9 26 290-315 104-134 (148)
161 3knv_A TNF receptor-associated 20.1 16 0.00054 31.7 -0.9 45 289-339 30-74 (141)
No 1
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=99.44 E-value=6.5e-14 Score=118.15 Aligned_cols=62 Identities=26% Similarity=0.646 Sum_probs=50.7
Q ss_pred CCCCceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCccccchhhhh
Q psy5823 286 DSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVDEGSRKEKK 349 (444)
Q Consensus 286 d~~~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~~~~~k~kr 349 (444)
++.+++.| ||+..++++ .||+||.|+.|||+.|+|++....++.|+|+.|.+......+...
T Consensus 24 ~~~d~vrC-iC~~~~~~~-~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~~~~~~~~~~~ 85 (98)
T 2lv9_A 24 YGTDVTRC-ICGFTHDDG-YMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQPRNLDKERAVL 85 (98)
T ss_dssp CCCCBCCC-TTSCCSCSS-CEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSSSCCCHHHHHH
T ss_pred CCCCCEEe-ECCCccCCC-cEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcCCCCCHHHHHH
Confidence 33456789 999988777 899999999999999999987755568999999987766554443
No 2
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=99.39 E-value=8.3e-14 Score=111.38 Aligned_cols=55 Identities=62% Similarity=1.550 Sum_probs=46.9
Q ss_pred CCCCCceeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCCCc
Q psy5823 285 GDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSKV 340 (444)
Q Consensus 285 ed~~~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~~~ 340 (444)
+++....+|.+|+.+++++ +||+||.|+.|||+.|+|++.. .+.+.|||+.|...
T Consensus 13 ~~~~~~~~C~~C~~~~~~~-~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~ 68 (75)
T 2k16_A 13 EWGNQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANK 68 (75)
T ss_dssp SSSCEEECBTTTTBCCSSC-CEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHH
T ss_pred ccCCCCcCCCCCCCCCCCC-CEEEcCCCCcccccccCCCCccCCCCCCEEChhccCc
Confidence 3445678899999998876 8999999999999999999888 44579999999843
No 3
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.37 E-value=1.4e-12 Score=109.22 Aligned_cols=53 Identities=43% Similarity=1.156 Sum_probs=43.0
Q ss_pred CCCCCCceeccccCCCCCCCCCeeecCC--CC-CcccccccccCCCCCCCceecCCCCCc
Q psy5823 284 TGDSKQVWICPACGVQDDGSLPMIGCDG--CD-AWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 284 ded~~~~~~C~VC~~~ddg~~~mI~CD~--C~-~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
..+.+...|| +|+.++++ +||+||+ |. .|||+.|||++..+ .+.|||+.|...
T Consensus 30 ~~d~~e~~yC-iC~~~~~g--~MI~CD~~dC~~~WfH~~CVgl~~~p-~g~W~Cp~C~~~ 85 (91)
T 1weu_A 30 PVDPNEPTYC-LCHQVSYG--EMIGCDNPDCSIEWFHFACVGLTTKP-RGKWFCPRCSQE 85 (91)
T ss_dssp CCCSCCCBCS-TTCCBCCS--CCCCCSCSSCSCCCCCSTTTTCSSCC-CSSCCCTTTCCC
T ss_pred CcCCCCCcEE-ECCCCCCC--CEeEecCCCCCCCCEecccCCcCcCC-CCCEECcCccCc
Confidence 3444567899 99998775 5999999 76 79999999987654 478999999854
No 4
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.34 E-value=3.8e-13 Score=107.17 Aligned_cols=56 Identities=32% Similarity=0.809 Sum_probs=46.2
Q ss_pred CCCCCCceeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCCCc
Q psy5823 284 TGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSKV 340 (444)
Q Consensus 284 ded~~~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~~~ 340 (444)
++++.+..+| +|+.+++++.+||+||.|..|||+.|+|++.. ..++.|+|+.|...
T Consensus 10 ~~~~~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 10 RGVDNWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp CSSCSSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred CCCCCcceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCC
Confidence 3455678999 99998754448999999999999999999865 45689999999843
No 5
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=99.32 E-value=4.3e-13 Score=106.35 Aligned_cols=52 Identities=27% Similarity=0.669 Sum_probs=44.8
Q ss_pred CCCCceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCC
Q psy5823 286 DSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSK 339 (444)
Q Consensus 286 d~~~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~ 339 (444)
++....+| +|+.+++++ +||+||.|..|||+.|+|++.....+.|+|+.|..
T Consensus 15 ~~~~~~~C-iC~~~~~~~-~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 15 YFQGLVTC-FCMKPFAGR-PMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp TTTTCCCS-TTCCCCTTC-CEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred CCCCceEe-ECCCcCCCC-CEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 33456899 999998877 99999999999999999999875557999999973
No 6
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=99.29 E-value=3.1e-13 Score=112.92 Aligned_cols=49 Identities=35% Similarity=0.994 Sum_probs=40.6
Q ss_pred CCCceeccccCCCCCCCCCeeecCCCC---CcccccccccCCCCCCCceecCC-CCC
Q psy5823 287 SKQVWICPACGVQDDGSLPMIGCDGCD---AWYHWVCVGLVAEPETSDWFCPK-CSK 339 (444)
Q Consensus 287 ~~~~~~C~VC~~~ddg~~~mI~CD~C~---~WfH~~CvG~~~~~~~~~w~Cp~-C~~ 339 (444)
+++..|| +|+.++++. ||+||+|+ .|||+.|||++..+ .+.|||+. |..
T Consensus 23 ~~~~~yC-iC~~~~~g~--MI~CD~c~C~~eWfH~~CVgl~~~p-~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 23 NQEEVYC-FCRNVSYGP--MVACDNPACPFEWFHYGCVGLKQAP-KGKWYCSKDCKE 75 (90)
T ss_dssp -CCSCCS-TTTCCCSSS--EECCCSSSCSCSCEETTTSSCSSCT-TSCCCSSHHHHH
T ss_pred CCCCcEE-EeCCCCCCC--EEEecCCCCccccCcCccCCCCcCC-CCCccCChhhcc
Confidence 3456799 999987765 99999977 99999999998764 47999999 973
No 7
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.28 E-value=9.6e-13 Score=106.53 Aligned_cols=54 Identities=28% Similarity=0.654 Sum_probs=44.8
Q ss_pred CCCCCceeccccCCCCCCCCCeeecC--CCCCcccccccccCCCC------CCCceecCCCCCc
Q psy5823 285 GDSKQVWICPACGVQDDGSLPMIGCD--GCDAWYHWVCVGLVAEP------ETSDWFCPKCSKV 340 (444)
Q Consensus 285 ed~~~~~~C~VC~~~ddg~~~mI~CD--~C~~WfH~~CvG~~~~~------~~~~w~Cp~C~~~ 340 (444)
.++++.++| +|+.+++++ +||+|| .|..|||+.|||++... .+..|||+.|...
T Consensus 11 ~~~~~~~~C-iC~~~~~~g-~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~ 72 (78)
T 1wew_A 11 FQPEIKVRC-VCGNSLETD-SMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLT 72 (78)
T ss_dssp SSCCCCCCC-SSCCCCCCS-CEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHC
T ss_pred cCCCCCEEe-ECCCcCCCC-CEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcc
Confidence 344567899 999996666 899999 99999999999998762 3578999999843
No 8
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.28 E-value=9e-13 Score=102.32 Aligned_cols=52 Identities=31% Similarity=0.698 Sum_probs=43.5
Q ss_pred CceeccccCCCCCCCCCeeecCCCCCcccccccccCCCC--CCCceecCCCCCc
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP--ETSDWFCPKCSKV 340 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~--~~~~w~Cp~C~~~ 340 (444)
...+|.+|+.+++++.+||+||.|..|||+.|+|++... ....|+|+.|...
T Consensus 5 e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 356899999998644489999999999999999998772 3478999999854
No 9
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=99.28 E-value=4.2e-12 Score=101.49 Aligned_cols=53 Identities=43% Similarity=1.156 Sum_probs=42.7
Q ss_pred CCCCCCceeccccCCCCCCCCCeeecCC--CC-CcccccccccCCCCCCCceecCCCCCc
Q psy5823 284 TGDSKQVWICPACGVQDDGSLPMIGCDG--CD-AWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 284 ded~~~~~~C~VC~~~ddg~~~mI~CD~--C~-~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
..+++...+| +|+.++++ +||+||+ |. .|||+.|||++..+ .+.|||+.|...
T Consensus 10 ~~d~~~~~~C-~C~~~~~g--~MI~CD~~~C~~~wfH~~Cvgl~~~p-~g~w~Cp~C~~~ 65 (71)
T 1wen_A 10 PVDPNEPTYC-LCHQVSYG--EMIGCDNPDCSIEWFHFACVGLTTKP-RGKWFCPRCSQE 65 (71)
T ss_dssp CCCTTSCCCS-TTCCCSCS--SEECCSCSSCSCCCEETTTTTCSSCC-SSCCCCTTTSSC
T ss_pred ccCCCCCCEE-ECCCCCCC--CEeEeeCCCCCCccEecccCCcCcCC-CCCEECCCCCcc
Confidence 3344567899 99998775 5999999 77 79999999987654 478999999854
No 10
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=99.27 E-value=2.6e-13 Score=108.99 Aligned_cols=55 Identities=33% Similarity=0.776 Sum_probs=45.5
Q ss_pred CCCCceeccccCCCCCCCCCeeecCCCCCcccccccccCCCC--CCCceecCCCCCcc
Q psy5823 286 DSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP--ETSDWFCPKCSKVD 341 (444)
Q Consensus 286 d~~~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~--~~~~w~Cp~C~~~~ 341 (444)
.+++..+| +|+.+++++.+||+||.|..|||+.|+|++... ..+.|+|+.|....
T Consensus 6 ~~~~~~yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~ 62 (75)
T 3kqi_A 6 MATVPVYC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTH 62 (75)
T ss_dssp TCCCCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHH
T ss_pred CCCCeeEE-ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccC
Confidence 34567899 999997754589999999999999999999873 24689999998654
No 11
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.27 E-value=3.3e-13 Score=108.33 Aligned_cols=51 Identities=31% Similarity=0.897 Sum_probs=43.1
Q ss_pred CceeccccCCCCCCCCCeeecCCCCCcccccccccCCCC------CCCceecCCCCCcc
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP------ETSDWFCPKCSKVD 341 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~------~~~~w~Cp~C~~~~ 341 (444)
+..+| +|+.+++++ +||+||.|..|||+.|+|++... ....|+|+.|....
T Consensus 15 ~~~~C-~C~~~~~~~-~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 15 NALYC-ICRQPHNNR-FMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp TCCCS-TTCCCCCSS-CEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred CCCEE-ECCCccCCC-CEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 35889 999998876 89999999999999999998652 35789999998443
No 12
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.26 E-value=1.7e-12 Score=105.11 Aligned_cols=53 Identities=30% Similarity=0.664 Sum_probs=44.1
Q ss_pred CCceeccccCCCCCCCCCeeecCCCCCcccccccccCCC--CCCCceecCCCCCcc
Q psy5823 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE--PETSDWFCPKCSKVD 341 (444)
Q Consensus 288 ~~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~--~~~~~w~Cp~C~~~~ 341 (444)
.+..+| +|+.+++++.+||+||.|..|||+.|+|++.. ...+.|+|+.|....
T Consensus 10 ~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 10 LVPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CCccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 346789 99999864448999999999999999999876 335799999999654
No 13
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=99.26 E-value=1e-12 Score=98.69 Aligned_cols=47 Identities=30% Similarity=0.773 Sum_probs=41.9
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCC
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCS 338 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~ 338 (444)
..+| +|+.+++++ +||+||.|+.|||+.|+|++....++.|+|+.|.
T Consensus 4 ~~~C-~C~~~~~~~-~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~ 50 (52)
T 3o7a_A 4 LVTC-FCMKPFAGR-PMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCR 50 (52)
T ss_dssp CBCS-TTCCBCTTC-CEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHH
T ss_pred CeEE-EeCCcCCCC-CEEEcCCCCccccccccCCCcccCCCcEECcCCC
Confidence 4689 999998876 8999999999999999999887545799999996
No 14
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=99.22 E-value=2.3e-12 Score=101.73 Aligned_cols=51 Identities=24% Similarity=0.627 Sum_probs=41.8
Q ss_pred CCCceeccccCCCCCCCCCeeecCC--CCCcccccccccCCC-----CCCCceecCCCCC
Q psy5823 287 SKQVWICPACGVQDDGSLPMIGCDG--CDAWYHWVCVGLVAE-----PETSDWFCPKCSK 339 (444)
Q Consensus 287 ~~~~~~C~VC~~~ddg~~~mI~CD~--C~~WfH~~CvG~~~~-----~~~~~w~Cp~C~~ 339 (444)
+...++| +|+.+++++ +||+||+ |..|||+.|||++.. ..++.|||+.|+.
T Consensus 7 ~e~~v~C-~C~~~~~~g-~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 7 PEAKVRC-ICSSTMVND-SMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp SSCEECC-TTCCCSCCS-CEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred CCCCEEe-ECCCCcCCC-CEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 3456899 999987777 8999995 999999999999765 2235799999973
No 15
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.15 E-value=1.1e-11 Score=98.87 Aligned_cols=49 Identities=37% Similarity=1.049 Sum_probs=40.9
Q ss_pred CCceeccccCCCCCCCCCeeecCCCC---CcccccccccCCCCCCCceecCCCCCc
Q psy5823 288 KQVWICPACGVQDDGSLPMIGCDGCD---AWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 288 ~~~~~C~VC~~~ddg~~~mI~CD~C~---~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
+...|| +|+.++++ +||+||.|+ .|||+.|||++.. +.+.|||+.|...
T Consensus 4 ~~~~yC-~C~~~~~g--~MI~CD~cdC~~~WfH~~Cvgl~~~-p~~~w~Cp~C~~~ 55 (70)
T 1x4i_A 4 GSSGYC-ICNQVSYG--EMVGCDNQDCPIEWFHYGCVGLTEA-PKGKWYCPQCTAA 55 (70)
T ss_dssp SCCCCS-TTSCCCCS--SEECCSCTTCSCCCEEHHHHTCSSC-CSSCCCCHHHHHH
T ss_pred CCCeEE-EcCCCCCC--CEeEeCCCCCCccCCcccccccCcC-CCCCEECCCCCcc
Confidence 456799 89998766 599999985 8999999999775 4579999999843
No 16
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=99.13 E-value=7.5e-12 Score=96.63 Aligned_cols=49 Identities=43% Similarity=1.193 Sum_probs=39.7
Q ss_pred CCCceeccccCCCCCCCCCeeecCC--CC-CcccccccccCCCCCCCceecCCCCC
Q psy5823 287 SKQVWICPACGVQDDGSLPMIGCDG--CD-AWYHWVCVGLVAEPETSDWFCPKCSK 339 (444)
Q Consensus 287 ~~~~~~C~VC~~~ddg~~~mI~CD~--C~-~WfH~~CvG~~~~~~~~~w~Cp~C~~ 339 (444)
+++..+| +|+.+++| .||+||+ |. .|||+.|+|++..+ .+.|||+.|..
T Consensus 6 ~~e~~yC-~C~~~~~g--~mi~CD~~~C~~~wfH~~Cvgl~~~p-~~~w~Cp~C~~ 57 (59)
T 3c6w_A 6 SNEPTYC-LCHQVSYG--EMIGCDNPDCPIEWFHFACVDLTTKP-KGKWFCPRCVQ 57 (59)
T ss_dssp --CCEET-TTTEECCS--EEEECSCTTCSSCEEETGGGTCSSCC-SSCCCCHHHHC
T ss_pred CCCCcEE-ECCCCCCC--CeeEeeCCCCCCCCEecccCCcccCC-CCCEECcCccC
Confidence 4456799 99998765 4999999 77 79999999987664 37899999973
No 17
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=99.13 E-value=7e-12 Score=94.14 Aligned_cols=48 Identities=35% Similarity=0.931 Sum_probs=39.7
Q ss_pred eeccccCCCCCCCCCeeecC-CCCCcccccccccCCC-CCCCceecCCCC
Q psy5823 291 WICPACGVQDDGSLPMIGCD-GCDAWYHWVCVGLVAE-PETSDWFCPKCS 338 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD-~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~ 338 (444)
+.|.+|+++++++.+||+|| .|+.|||+.|+|++.. ...+.|+|+.|.
T Consensus 3 c~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 3 CAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp CSCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred ccCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 45669999987555999999 8999999999999876 223789999994
No 18
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=99.12 E-value=9.2e-12 Score=97.09 Aligned_cols=50 Identities=40% Similarity=1.102 Sum_probs=39.8
Q ss_pred CCCCceeccccCCCCCCCCCeeecCC--CC-CcccccccccCCCCCCCceecCCCCC
Q psy5823 286 DSKQVWICPACGVQDDGSLPMIGCDG--CD-AWYHWVCVGLVAEPETSDWFCPKCSK 339 (444)
Q Consensus 286 d~~~~~~C~VC~~~ddg~~~mI~CD~--C~-~WfH~~CvG~~~~~~~~~w~Cp~C~~ 339 (444)
++++..+| +|+.++++ +||+||+ |. .|||+.|||++.. +.+.|||+.|..
T Consensus 7 d~~e~~yC-~C~~~~~g--~MI~CD~c~C~~~WfH~~Cvgl~~~-p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 7 DPNEPTYC-LCNQVSYG--EMIGCDNEQCPIEWFHFSCVSLTYK-PKGKWYCPKCRG 59 (62)
T ss_dssp ---CCEET-TTTEECCS--EEEECSCTTCSSCEEETGGGTCSSC-CSSCCCCHHHHT
T ss_pred CCCCCcEE-ECCCCCCC--CeeeeeCCCCCcccEecccCCcCcC-CCCCEECcCccc
Confidence 34456899 99998775 4999999 55 9999999999765 357999999973
No 19
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.10 E-value=3.3e-11 Score=89.57 Aligned_cols=47 Identities=26% Similarity=0.767 Sum_probs=41.2
Q ss_pred eccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCCC
Q psy5823 292 ICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339 (444)
Q Consensus 292 ~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~~ 339 (444)
+|.+|+..++++ .||.||+|+.|||+.|++++.. .+.+.|+|+.|..
T Consensus 2 ~C~vC~~~~~~~-~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDD-KLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCS-CCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCC-CEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 588999987766 8999999999999999987766 6678999999974
No 20
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=99.10 E-value=1.2e-11 Score=95.61 Aligned_cols=50 Identities=46% Similarity=1.259 Sum_probs=39.3
Q ss_pred CCCCceeccccCCCCCCCCCeeecCC--CC-CcccccccccCCCCCCCceecCCCCC
Q psy5823 286 DSKQVWICPACGVQDDGSLPMIGCDG--CD-AWYHWVCVGLVAEPETSDWFCPKCSK 339 (444)
Q Consensus 286 d~~~~~~C~VC~~~ddg~~~mI~CD~--C~-~WfH~~CvG~~~~~~~~~w~Cp~C~~ 339 (444)
++++..+| +|+.++++ .||+||+ |. .|||+.|+|++..+ .+.|||+.|..
T Consensus 6 d~~e~~~C-~C~~~~~g--~mi~CD~cdC~~~wfH~~Cvgl~~~p-~g~w~C~~C~~ 58 (60)
T 2vnf_A 6 DPNEPTYC-LCHQVSYG--EMIGCDNPDCSIEWFHFACVGLTTKP-RGKWFCPRCSQ 58 (60)
T ss_dssp ---CCEET-TTTEECCS--EEEECSCTTCSSCEEETGGGTCSSCC-SSCCCCHHHHC
T ss_pred CCCCCCEE-ECCCcCCC--CEEEeCCCCCCCceEehhcCCCCcCC-CCCEECcCccC
Confidence 34456899 99998765 4999999 55 89999999987654 47899999973
No 21
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=99.10 E-value=8e-12 Score=98.33 Aligned_cols=50 Identities=26% Similarity=0.824 Sum_probs=41.8
Q ss_pred CceeccccCCCCCCCCCeeecC-CCCCcccccccccCCC-------CCCCceecCCCC
Q psy5823 289 QVWICPACGVQDDGSLPMIGCD-GCDAWYHWVCVGLVAE-------PETSDWFCPKCS 338 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD-~C~~WfH~~CvG~~~~-------~~~~~w~Cp~C~ 338 (444)
.+..|.+|+++++++.+||+|| .|..|||+.|+|++.. .+...|+|+.|.
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 3457999999987666999999 9999999999999975 245689999985
No 22
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.97 E-value=2.5e-10 Score=88.42 Aligned_cols=48 Identities=35% Similarity=0.805 Sum_probs=40.5
Q ss_pred CceeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCCCc
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSKV 340 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~~~ 340 (444)
...+|.+|+. ++ .||+||.|+.|||+.|++++.. .+.+.|+|+.|...
T Consensus 10 ~~~~C~vC~~--~g--~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 10 HQDYCEVCQQ--GG--EIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CCSSCTTTSC--CS--SEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCccCCC--CC--cEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 3457999997 34 4999999999999999999866 67789999999854
No 23
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=98.97 E-value=5.9e-11 Score=107.96 Aligned_cols=51 Identities=35% Similarity=0.930 Sum_probs=42.8
Q ss_pred CceeccccCCCCCCCCCeeecCCCCCcccccccccCCC--CCCCceecCCCCCc
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE--PETSDWFCPKCSKV 340 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~--~~~~~w~Cp~C~~~ 340 (444)
+..+| +|+.+++++.+||+||.|+.|||+.|+|++.. ...+.|+|+.|...
T Consensus 7 ~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 7 TKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 46799 99998764448999999999999999998765 34679999999854
No 24
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.96 E-value=1.9e-10 Score=96.05 Aligned_cols=49 Identities=35% Similarity=0.814 Sum_probs=42.5
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCCC
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~~ 339 (444)
...|.||+..++.+ .||+||.|+.|||+.|+++++. .+.+.|||+.|..
T Consensus 16 ~~~C~vC~~~~~~~-~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~ 65 (92)
T 2e6r_A 16 SYICQVCSRGDEDD-KLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCIL 65 (92)
T ss_dssp CCCCSSSCCSGGGG-GCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHH
T ss_pred CCCCccCCCcCCCC-CEEEcCCCCchhccccCCCCcccCCCCCcCCccCcC
Confidence 34799999987665 7999999999999999998776 6678999999974
No 25
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=98.96 E-value=4.4e-11 Score=125.91 Aligned_cols=56 Identities=29% Similarity=0.681 Sum_probs=45.5
Q ss_pred CCCCceeccccCCCCCCCCCeeecCCCCCcccccccccCCCC--CCCceecCCCCCccc
Q psy5823 286 DSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP--ETSDWFCPKCSKVDE 342 (444)
Q Consensus 286 d~~~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~--~~~~w~Cp~C~~~~~ 342 (444)
.+....+| +|+.+++.+.+||+||.|+.|||+.|+|++... ..+.|+|+.|.....
T Consensus 33 ~~~~~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~ 90 (488)
T 3kv5_D 33 PPPPPVYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVLHG 90 (488)
T ss_dssp CCCCCEET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHHHC
T ss_pred CCCCCeEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCCcC
Confidence 34567899 999997644489999999999999999998772 246899999986543
No 26
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.95 E-value=1e-10 Score=99.90 Aligned_cols=52 Identities=29% Similarity=0.816 Sum_probs=42.4
Q ss_pred ceeccccCCCCCCCCCeeecC-CCCCcccccccccCCC-------CCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCD-GCDAWYHWVCVGLVAE-------PETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD-~C~~WfH~~CvG~~~~-------~~~~~w~Cp~C~~~~ 341 (444)
++.|.+|+++++++..||+|| .|..|||+.|+|++.. .+...|+|+.|....
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 467999999965444799998 9999999999999863 244789999998543
No 27
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.94 E-value=5.8e-10 Score=86.32 Aligned_cols=48 Identities=27% Similarity=0.805 Sum_probs=40.1
Q ss_pred CceeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCCCc
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSKV 340 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~~~ 340 (444)
...+|.+|+. .+ .||+||.|+.+||+.|++++.. .+.+.|+|+.|...
T Consensus 8 ~~~~C~vC~~--~g--~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 8 HMEFCRVCKD--GG--ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SCSSCTTTCC--CS--SCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred CCCcCCCCCC--CC--CEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 3457999986 34 4999999999999999998766 66789999999854
No 28
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.91 E-value=2.4e-10 Score=89.62 Aligned_cols=47 Identities=28% Similarity=0.725 Sum_probs=39.6
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCCCc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSKV 340 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~~~ 340 (444)
..+|.+|+. ++ .||+||.|+.|||+.|+++++. .+.+.|+|+.|...
T Consensus 8 ~~~C~vC~~--~g--~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~ 55 (66)
T 1xwh_A 8 EDECAVCRD--GG--ELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQA 55 (66)
T ss_dssp CCSBSSSSC--CS--SCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHT
T ss_pred CCCCccCCC--CC--CEEEcCCCChhhcccccCCCcCcCCCCCeECccccCc
Confidence 357999997 34 4999999999999999998776 66789999999844
No 29
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.91 E-value=4.6e-10 Score=85.27 Aligned_cols=46 Identities=28% Similarity=0.805 Sum_probs=39.0
Q ss_pred CceeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCC
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCS 338 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~ 338 (444)
...+|.+|+.. + .||.||.|+.|||+.|++++.. .+.+.|+|+.|.
T Consensus 8 ~~~~C~vC~~~--g--~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~ 54 (56)
T 2yql_A 8 HEDFCSVCRKS--G--QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 54 (56)
T ss_dssp SCCSCSSSCCS--S--CCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHH
T ss_pred CCCCCccCCCC--C--eEEEcCCCCcceECccCCCCcCCCCCCceEChhhh
Confidence 34579999983 4 4999999999999999998776 667899999996
No 30
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.91 E-value=2.8e-10 Score=88.56 Aligned_cols=52 Identities=23% Similarity=0.618 Sum_probs=42.1
Q ss_pred CceeccccCCCC--CCCCCeeecCCCCCcccccccccCCCC----CCCceecCCCCCcc
Q psy5823 289 QVWICPACGVQD--DGSLPMIGCDGCDAWYHWVCVGLVAEP----ETSDWFCPKCSKVD 341 (444)
Q Consensus 289 ~~~~C~VC~~~d--dg~~~mI~CD~C~~WfH~~CvG~~~~~----~~~~w~Cp~C~~~~ 341 (444)
....|.+|+..+ +++ .||+||.|+.|||+.|++++... +.+.|||+.|....
T Consensus 5 ~~~~C~vC~~~~~~~~~-~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 5 SSGVCTICQEEYSEAPN-EMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCCBSSSCCCCCBTTB-CEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCC-CEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcc
Confidence 345799999863 234 79999999999999999997752 67899999998544
No 31
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.87 E-value=1.5e-09 Score=85.51 Aligned_cols=46 Identities=26% Similarity=0.606 Sum_probs=39.2
Q ss_pred eeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCCCc
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSKV 340 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~~~ 340 (444)
..|.+|+. +++ ||+||.|+.|||++|+++++. .+.+.|||+.|...
T Consensus 13 ~~C~vC~~--~~~--ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 13 ARCGVCGD--GTD--VLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp CCCTTTSC--CTT--CEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCcCCCCC--CCe--EEECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 46999985 444 999999999999999998877 66789999999843
No 32
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.87 E-value=5.4e-10 Score=92.59 Aligned_cols=49 Identities=22% Similarity=0.602 Sum_probs=40.6
Q ss_pred ceeccccCCCC--CCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCc
Q psy5823 290 VWICPACGVQD--DGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 290 ~~~C~VC~~~d--dg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
...|.||+..+ +++ .||+||.|+.|||+.|++++. .+.+.|||+.|...
T Consensus 25 ~~~C~vC~~~~s~~~~-~ll~CD~C~~~fH~~Cl~p~~-vP~g~W~C~~C~~~ 75 (88)
T 2l43_A 25 DAVCSICMDGESQNSN-VILFCDMCNLAVHQECYGVPY-IPEGQWLCRHCLQS 75 (88)
T ss_dssp CCCCSSCCSSSSCSEE-EEEECSSSCCCCCHHHHTCSS-CCSSCCCCHHHHHH
T ss_pred CCcCCcCCCCCCCCCC-CEEECCCCCchhhcccCCCCc-cCCCceECccccCc
Confidence 35799999864 444 799999999999999999985 55689999999843
No 33
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.86 E-value=1.1e-09 Score=87.17 Aligned_cols=48 Identities=29% Similarity=0.857 Sum_probs=40.8
Q ss_pred eeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCC-ceecCCCCC
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETS-DWFCPKCSK 339 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~-~w~Cp~C~~ 339 (444)
..|.+|+..++++ .||+||+|+.|||++|+++++. .+.+ .|+|+.|..
T Consensus 19 C~C~~C~~~~~~~-~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 19 CACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp TSBTTTCCCSCGG-GEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCCcCCCCcCCCC-CEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 3577889877766 7999999999999999998777 5566 999999984
No 34
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.85 E-value=6.3e-10 Score=88.91 Aligned_cols=48 Identities=23% Similarity=0.621 Sum_probs=40.3
Q ss_pred ceeccccCCCC--CCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCC
Q psy5823 290 VWICPACGVQD--DGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSK 339 (444)
Q Consensus 290 ~~~C~VC~~~d--dg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~ 339 (444)
...|.+|+..+ +++ .||+||.|+.|||+.|++++. .+.+.|||+.|..
T Consensus 16 ~~~C~vC~~~~s~~~~-~ll~CD~C~~~~H~~Cl~~~~-vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 16 DAVCSICMDGESQNSN-VILFCDMCNLAVHQECYGVPY-IPEGQWLCRHCLQ 65 (71)
T ss_dssp SCSCSSSCCCCCCSSS-CEEECSSSCCEEEHHHHTCSS-CCSSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCC-CEEECCCCCCccccccCCCCc-CCCCCcCCccCcC
Confidence 35799999864 444 799999999999999999985 5568999999974
No 35
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.83 E-value=9.5e-10 Score=84.53 Aligned_cols=46 Identities=28% Similarity=0.800 Sum_probs=39.1
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCCC
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~~ 339 (444)
..+|.+|+.. + .||+||.|+.|||+.|++++.. .+.+.|+|+.|..
T Consensus 5 ~~~C~vC~~~--g--~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~ 51 (60)
T 2puy_A 5 EDFCSVCRKS--G--QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 51 (60)
T ss_dssp CSSCTTTCCC--S--SCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHH
T ss_pred CCCCcCCCCC--C--cEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccC
Confidence 3479999983 4 4999999999999999998776 6678999999974
No 36
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.82 E-value=2.2e-09 Score=87.04 Aligned_cols=48 Identities=27% Similarity=0.794 Sum_probs=41.5
Q ss_pred eeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCC-ceecCCCCC
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETS-DWFCPKCSK 339 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~-~w~Cp~C~~ 339 (444)
..|.+|+..++++ .||+||.|+.+||++|+++++. .+.+ .|||+.|..
T Consensus 27 c~C~vC~~~~~~~-~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 27 CSCRVCGGKHEPN-MQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSCSSSCCCCCST-TEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCcCcCCcCCCC-CEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 4788999887776 7999999999999999998777 5566 899999973
No 37
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=98.81 E-value=2.1e-10 Score=119.55 Aligned_cols=54 Identities=31% Similarity=0.741 Sum_probs=44.4
Q ss_pred CceeccccCCCCCCCCCeeecCCCCCcccccccccCCC--CCCCceecCCCCCcccc
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE--PETSDWFCPKCSKVDEG 343 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~--~~~~~w~Cp~C~~~~~~ 343 (444)
...+| +|+.+++++.+||+||.|+.|||+.|+|++.. ...+.|+|+.|......
T Consensus 4 ~~~yC-iC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~~~ 59 (447)
T 3kv4_A 4 VPVYC-LCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGP 59 (447)
T ss_dssp CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHHCC
T ss_pred CCeEE-eCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCccccCC
Confidence 46799 99999764448999999999999999999877 33478999999865443
No 38
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=98.78 E-value=2.4e-09 Score=100.46 Aligned_cols=48 Identities=23% Similarity=0.654 Sum_probs=40.9
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~~~~ 341 (444)
..+|.+|+. +|+ ||+||+|+.|||+.|++++.. .+.+.|+|+.|....
T Consensus 7 ~~~C~~C~~--~g~--ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 7 EDWCAVCQN--GGD--LLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp CSSBTTTCC--CEE--EEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCC--CCc--eEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 456999996 444 999999999999999998877 677899999998654
No 39
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.77 E-value=1.6e-09 Score=89.71 Aligned_cols=51 Identities=22% Similarity=0.644 Sum_probs=42.7
Q ss_pred CceeccccCCCCC--CCCCeeecCCCCCcccccccccCCC-----CCCCceecCCCCCc
Q psy5823 289 QVWICPACGVQDD--GSLPMIGCDGCDAWYHWVCVGLVAE-----PETSDWFCPKCSKV 340 (444)
Q Consensus 289 ~~~~C~VC~~~dd--g~~~mI~CD~C~~WfH~~CvG~~~~-----~~~~~w~Cp~C~~~ 340 (444)
...+|.+|+..++ ++ .||+||.|+.+||+.|+++++. .+.+.|||+.|...
T Consensus 15 ~~~~C~vC~~~~~~~~~-~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~ 72 (88)
T 1wev_A 15 MGLACVVCRQMTVASGN-QLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQ 72 (88)
T ss_dssp HCCSCSSSCCCCCCTTC-CEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHH
T ss_pred CCCcCCCCCCCCCCCCC-ceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccch
Confidence 3467999998754 24 6999999999999999999876 57789999999843
No 40
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=98.74 E-value=1.4e-09 Score=101.24 Aligned_cols=52 Identities=31% Similarity=0.725 Sum_probs=41.7
Q ss_pred eccccCCCCCCCC---CeeecCCCCCcccccccccCCC----C----CCCceecCCCCCcccc
Q psy5823 292 ICPACGVQDDGSL---PMIGCDGCDAWYHWVCVGLVAE----P----ETSDWFCPKCSKVDEG 343 (444)
Q Consensus 292 ~C~VC~~~ddg~~---~mI~CD~C~~WfH~~CvG~~~~----~----~~~~w~Cp~C~~~~~~ 343 (444)
+|++|+++++++. .||+||.|+.|||+.|+|++.. . ....|+|+.|......
T Consensus 4 ~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~ 66 (183)
T 3lqh_A 4 FCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPA 66 (183)
T ss_dssp BCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSC
T ss_pred cCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCH
Confidence 6999999886553 4999999999999999999753 0 1237999999976543
No 41
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.69 E-value=1.5e-08 Score=84.31 Aligned_cols=47 Identities=23% Similarity=0.678 Sum_probs=40.1
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCCCc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSKV 340 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~~~ 340 (444)
..+|.+|+. +++ +|+||.|+.+||+.|+.++.. .+.+.|+|+.|...
T Consensus 25 ~~~C~vC~~--~g~--LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 25 ATICRVCQK--PGD--LVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp SSCCSSSCS--SSC--CEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred CCcCcCcCC--CCC--EEECCCCCCceecccCCCCCCCCcCCCcCCccccCC
Confidence 347999997 344 999999999999999988877 67789999999844
No 42
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.68 E-value=7.4e-09 Score=84.01 Aligned_cols=49 Identities=33% Similarity=0.876 Sum_probs=41.3
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCc-eecCCCCC
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSD-WFCPKCSK 339 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~-w~Cp~C~~ 339 (444)
.+.|.+|+..++.+ .||+||.|+.+||++|+++++. .+.+. |+|+.|..
T Consensus 26 ~C~C~vC~~~~d~~-~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 26 VCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp TTSBTTTCCCSCGG-GEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred CCcCCccCCCCCCc-ceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 35688899887766 8999999999999999998877 55667 99999974
No 43
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=98.64 E-value=1.4e-08 Score=93.49 Aligned_cols=47 Identities=21% Similarity=0.671 Sum_probs=40.1
Q ss_pred eeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCCCcc
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSKVD 341 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~~~~ 341 (444)
.+|.+|+. +|+ +|+||+|+.|||..|++++.. .+.+.|+|+.|....
T Consensus 5 ~~C~~C~~--~g~--ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 5 DWCAVCQN--GGE--LLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp SSCTTTCC--CSS--CEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CccccCCC--CCe--eeecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 46999996 444 999999999999999998877 667899999998654
No 44
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.64 E-value=1.2e-08 Score=97.97 Aligned_cols=49 Identities=31% Similarity=0.863 Sum_probs=38.8
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCC-ceecCCCCC
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETS-DWFCPKCSK 339 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~-~w~Cp~C~~ 339 (444)
.+.|.+|+..++++ .||+||+|+.|||+.|+++++. .+.+ .|+|+.|..
T Consensus 174 ~c~C~vC~~~~~~~-~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 174 VCACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TTSCSSSCCCCC---CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCCcCCCCCCCCC-CeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 45799999987776 8999999999999999998877 5666 899999974
No 45
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.58 E-value=1.4e-08 Score=87.41 Aligned_cols=47 Identities=30% Similarity=0.824 Sum_probs=41.1
Q ss_pred eccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCCC
Q psy5823 292 ICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339 (444)
Q Consensus 292 ~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~~ 339 (444)
+|.+|+..++++ .||.||.|+.|||++|+++++. .+.+.|||+.|..
T Consensus 60 ~C~~C~~~~~~~-~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~ 107 (114)
T 2kwj_A 60 SCILCGTSENDD-QLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWE 107 (114)
T ss_dssp CCTTTTCCTTTT-TEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHH
T ss_pred ccCcccccCCCC-ceEEcCCCCccccccccCCCccCCCCCCeECccccc
Confidence 588899887666 7999999999999999998777 6778999999973
No 46
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.52 E-value=6.1e-08 Score=83.05 Aligned_cols=47 Identities=28% Similarity=0.704 Sum_probs=39.4
Q ss_pred eccccCCCC-CCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCCC
Q psy5823 292 ICPACGVQD-DGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339 (444)
Q Consensus 292 ~C~VC~~~d-dg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~~ 339 (444)
+|.+|+..+ +++ .||+||.|+.+||++|+++++. .+.+.|+|+.|.+
T Consensus 63 ~C~vC~~~~~~~~-~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 TCSSCRDQGKNAD-NMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CBTTTCCCCCTTC-CCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccCcCCCcc-ceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 588888754 334 7999999999999999998777 6778999999985
No 47
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.46 E-value=6.6e-08 Score=82.99 Aligned_cols=44 Identities=34% Similarity=0.838 Sum_probs=35.8
Q ss_pred ceeccccCCCCCCCCCeeecC--CCCCcccccccccCCCCCCCceecCCCC
Q psy5823 290 VWICPACGVQDDGSLPMIGCD--GCDAWYHWVCVGLVAEPETSDWFCPKCS 338 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD--~C~~WfH~~CvG~~~~~~~~~w~Cp~C~ 338 (444)
..+|.+|+. +|+ ||+|| .|+.|||+.|+++.. .+.+.|||+.|.
T Consensus 15 ~~~C~~C~~--~G~--ll~CD~~~Cp~~fH~~Cl~L~~-~P~g~W~Cp~c~ 60 (107)
T 4gne_A 15 EDYCFQCGD--GGE--LVMCDKKDCPKAYHLLCLNLTQ-PPYGKWECPWHQ 60 (107)
T ss_dssp CSSCTTTCC--CSE--EEECCSTTCCCEECTGGGTCSS-CCSSCCCCGGGB
T ss_pred CCCCCcCCC--CCc--EeEECCCCCCcccccccCcCCc-CCCCCEECCCCC
Confidence 457989984 444 99999 899999999999654 456899999775
No 48
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.45 E-value=5.7e-08 Score=82.62 Aligned_cols=49 Identities=33% Similarity=0.761 Sum_probs=41.9
Q ss_pred eccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCCCcc
Q psy5823 292 ICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSKVD 341 (444)
Q Consensus 292 ~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~~~~ 341 (444)
+|.+|+..++++ .||.||.|+.|||+.|+++++. .+.+.|+|+.|....
T Consensus 56 ~C~~C~~~~~~~-~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c~ 105 (111)
T 2ysm_A 56 VCQNCKQSGEDS-KMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICI 105 (111)
T ss_dssp CCTTTCCCSCCT-TEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHCCS
T ss_pred cccccCccCCCC-CeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcCcC
Confidence 588899887766 8999999999999999998777 667899999997544
No 49
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.43 E-value=1e-07 Score=88.63 Aligned_cols=47 Identities=23% Similarity=0.672 Sum_probs=39.8
Q ss_pred eeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCCCcc
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSKVD 341 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~~~~ 341 (444)
.+|.+|+. +|+ +|+||+|+.+||+.|+.++.. .+.+.|+|+.|....
T Consensus 3 ~~C~~C~~--~g~--ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 3 TICRVCQK--PGD--LVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCBTTTCC--CSS--CCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSC
T ss_pred CcCccCCC--CCc--eeECCCCCchhccccCCCCcccCCCCCCCCcCccCCC
Confidence 36999996 444 999999999999999988776 677899999998653
No 50
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=98.32 E-value=1.5e-07 Score=99.64 Aligned_cols=46 Identities=35% Similarity=0.891 Sum_probs=36.4
Q ss_pred cCCCCCCCCCeeecCCCCCcccccccccCCC--CCCCceecCCCCCcc
Q psy5823 296 CGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE--PETSDWFCPKCSKVD 341 (444)
Q Consensus 296 C~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~--~~~~~w~Cp~C~~~~ 341 (444)
+....+.+.+||+||.|+.|||+.|||++.. ...+.|+|+.|....
T Consensus 48 ~~~~~n~~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~~ 95 (528)
T 3pur_A 48 SHHHKKNDFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPHT 95 (528)
T ss_dssp TTTTTTSTTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHHHH
T ss_pred cccCCCcCCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcCCC
Confidence 3333344559999999999999999999987 334789999998643
No 51
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.07 E-value=2.4e-06 Score=72.51 Aligned_cols=47 Identities=26% Similarity=0.712 Sum_probs=39.8
Q ss_pred eeccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceecCCCC
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCS 338 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~ 338 (444)
.+|.+|+..++.+ .||.|+.|+..||..|+++... ...+.|+|+.|.
T Consensus 8 ~~C~~C~~~g~~~-~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 8 ANCAVCDSPGDLL-DQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp SCBTTTCCCCCTT-TSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCcCCCCCCCCc-CCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 4799999976544 6899999999999999999877 445789999986
No 52
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=97.96 E-value=2.9e-06 Score=76.20 Aligned_cols=49 Identities=24% Similarity=0.543 Sum_probs=41.0
Q ss_pred CceeccccCCCCCCCCCeeecCCCCCcccccccccCCC--------CCCCceecCCCCCcc
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE--------PETSDWFCPKCSKVD 341 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~--------~~~~~w~Cp~C~~~~ 341 (444)
...+|.+|+. +|+ +|+||.|.+.||..|+.++.. .+.+.|+|+.|....
T Consensus 62 ~~d~C~vC~~--GG~--LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~p 118 (142)
T 2lbm_A 62 MDEQCRWCAE--GGN--LICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEP 118 (142)
T ss_dssp CBCSCSSSCC--CSS--EEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCCT
T ss_pred CCCeecccCC--CCc--EEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCcc
Confidence 3568999997 666 999999999999999997764 367899999998654
No 53
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=97.79 E-value=4.3e-06 Score=71.17 Aligned_cols=37 Identities=35% Similarity=0.872 Sum_probs=30.3
Q ss_pred eeecCCCCCcccccccccCCC--------CCCCceecCCCCCccc
Q psy5823 306 MIGCDGCDAWYHWVCVGLVAE--------PETSDWFCPKCSKVDE 342 (444)
Q Consensus 306 mI~CD~C~~WfH~~CvG~~~~--------~~~~~w~Cp~C~~~~~ 342 (444)
||+||.|..|||..|++++.. +....|.|+.|.....
T Consensus 2 mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~~ 46 (140)
T 2ku7_A 2 MMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHV 46 (140)
T ss_dssp CCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTSC
T ss_pred ccccccCCCccCCcccccCHHHHHHHhhccccceeeCcccccccc
Confidence 999999999999999999752 3344799999986543
No 54
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=97.78 E-value=1.5e-05 Score=74.00 Aligned_cols=51 Identities=12% Similarity=0.240 Sum_probs=36.5
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCC-----CCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-----PETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-----~~~~~w~Cp~C~~~~ 341 (444)
..+| -||.+.+-+..|++|+.|..|||..|++.... ...-.|.|..|...+
T Consensus 5 ~~yC-YCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g 60 (177)
T 3rsn_A 5 AGSV-DEENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSG 60 (177)
T ss_dssp -------CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTS
T ss_pred eeEE-EcCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCCC
Confidence 4578 89998876779999999999999999986543 223468899998765
No 55
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=97.55 E-value=1.5e-05 Score=68.18 Aligned_cols=47 Identities=26% Similarity=0.582 Sum_probs=36.6
Q ss_pred eeccccCCCC------CCCCCeeecCCCCCcccccccccCCC----CCCCceecCCCC
Q psy5823 291 WICPACGVQD------DGSLPMIGCDGCDAWYHWVCVGLVAE----PETSDWFCPKCS 338 (444)
Q Consensus 291 ~~C~VC~~~d------dg~~~mI~CD~C~~WfH~~CvG~~~~----~~~~~w~Cp~C~ 338 (444)
.+|.+|...+ +++ .||.|++|+.+||.+|+++... ...+.|+|+.|.
T Consensus 6 ~~C~~C~~~~~~~~~g~~~-~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 6 PICSFCLGTKEQNREKKPE-ELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp SSBTTTCCCTTCCTTSCCC-CCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred ccccccCCchhhCcCCCch-hceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 4688997642 333 6999999999999999987432 345689999996
No 56
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=97.53 E-value=2.7e-05 Score=66.34 Aligned_cols=49 Identities=24% Similarity=0.454 Sum_probs=33.7
Q ss_pred ccccCCCCCCCCCeeecCCCCCcccccccccCCC-----CCCCceecCCCCCcc
Q psy5823 293 CPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-----PETSDWFCPKCSKVD 341 (444)
Q Consensus 293 C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-----~~~~~w~Cp~C~~~~ 341 (444)
|..|....+.+..||+|+.|+.|||..|+++... ...+.|+|+.|.+.+
T Consensus 62 c~~c~~~~~~~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 62 VDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQED 115 (117)
T ss_dssp BCCHHHHCCGGGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC---
T ss_pred ccccccccccCcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCCC
Confidence 3334333333337999999999999999998765 234569999998654
No 57
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=97.51 E-value=2.4e-05 Score=69.21 Aligned_cols=49 Identities=24% Similarity=0.543 Sum_probs=39.4
Q ss_pred CceeccccCCCCCCCCCeeecCCCCCcccccccccCCC--------CCCCceecCCCCCcc
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE--------PETSDWFCPKCSKVD 341 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~--------~~~~~w~Cp~C~~~~ 341 (444)
...+|.+|+. +|+ +|+||.|.+.||..|+.+... .+.+.|+|..|....
T Consensus 56 ~~~~C~vC~d--GG~--LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~p 112 (129)
T 3ql9_A 56 MDEQCRWCAE--GGN--LICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPEP 112 (129)
T ss_dssp CBSSCTTTCC--CSE--EEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCGG
T ss_pred CCCcCeecCC--CCe--eEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCHH
Confidence 3457999996 555 999999999999999986532 256889999998654
No 58
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=97.34 E-value=3.2e-05 Score=66.35 Aligned_cols=46 Identities=22% Similarity=0.573 Sum_probs=35.9
Q ss_pred eccccCCCC-------CCCCCeeecCCCCCcccccccccCCC----CCCCceecCCCC
Q psy5823 292 ICPACGVQD-------DGSLPMIGCDGCDAWYHWVCVGLVAE----PETSDWFCPKCS 338 (444)
Q Consensus 292 ~C~VC~~~d-------dg~~~mI~CD~C~~WfH~~CvG~~~~----~~~~~w~Cp~C~ 338 (444)
+|.+|...+ +++ .||.|+.|+..||.+|+++... ...+.|+|+.|.
T Consensus 3 ~C~~C~~~~~~n~k~g~~~-~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPE-ELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCC-CCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred cCccCCCCccccccCCCCC-CCeEeCCCCCccchhhCCChhhhhhccCCCccCccccC
Confidence 688897543 233 6999999999999999998743 345689999885
No 59
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=96.22 E-value=0.003 Score=52.22 Aligned_cols=48 Identities=23% Similarity=0.613 Sum_probs=37.4
Q ss_pred eeccccCCCCCCCCCeeecCCCCCcccccccccC------------CC-CCCCceecCCCCCc
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLV------------AE-PETSDWFCPKCSKV 340 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~------------~~-~~~~~w~Cp~C~~~ 340 (444)
..|.||.....++ ++.|..|.+.||..|+... .. ....-|.|+.|...
T Consensus 16 ~~C~VC~~~t~~~--l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL 76 (89)
T 1wil_A 16 EMCDVCEVWTAES--LFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp CCCTTTCCCCSSC--CSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred cccCccccccccc--eeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchh
Confidence 4699999866665 9999999999999997542 11 34567999999754
No 60
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=92.74 E-value=0.036 Score=50.53 Aligned_cols=49 Identities=20% Similarity=0.525 Sum_probs=38.9
Q ss_pred ceeccccCCCCCCCCCeeecC--CCCCcccccccccCCC-------CCCCceecCCCCCccc
Q psy5823 290 VWICPACGVQDDGSLPMIGCD--GCDAWYHWVCVGLVAE-------PETSDWFCPKCSKVDE 342 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD--~C~~WfH~~CvG~~~~-------~~~~~w~Cp~C~~~~~ 342 (444)
..||.+|+. +++ +|+|| .|.+.|-..|+..... ...+.|.|..|.+...
T Consensus 79 ~~yC~wC~~--Gg~--l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~l 136 (159)
T 3a1b_A 79 QSYCTICCG--GRE--VLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKGT 136 (159)
T ss_dssp BSSCTTTSC--CSE--EEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSCE
T ss_pred cceeeEecC--CCe--EEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCccH
Confidence 568999997 555 99999 7999999999764443 3457899999997653
No 61
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=91.92 E-value=0.046 Score=56.15 Aligned_cols=50 Identities=22% Similarity=0.591 Sum_probs=39.9
Q ss_pred CCceeccccCCCCCCCCCeeecC--CCCCcccccccccCCC-------CCCCceecCCCCCcc
Q psy5823 288 KQVWICPACGVQDDGSLPMIGCD--GCDAWYHWVCVGLVAE-------PETSDWFCPKCSKVD 341 (444)
Q Consensus 288 ~~~~~C~VC~~~ddg~~~mI~CD--~C~~WfH~~CvG~~~~-------~~~~~w~Cp~C~~~~ 341 (444)
....||.+|+. +++ +|+|| .|.+.|-..|+..... ...+.|.|..|.+..
T Consensus 91 G~~~yCr~C~~--Gg~--l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 91 GYQSYCSICCS--GET--LLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp SSBCSCTTTCC--CSS--CEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred CCcccceEcCC--CCe--EEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 34678999997 455 99999 8999999999876554 234689999999876
No 62
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.67 E-value=0.42 Score=36.03 Aligned_cols=48 Identities=21% Similarity=0.427 Sum_probs=33.2
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
...|.||......- ++. .|+-.||..|+............||.|....
T Consensus 20 ~~~C~IC~~~~~~~--~~~--~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 67 (73)
T 2ysl_A 20 EVICPICLDILQKP--VTI--DCGHNFCLKCITQIGETSCGFFKCPLCKTSV 67 (73)
T ss_dssp CCBCTTTCSBCSSE--EEC--TTCCEEEHHHHHHHCSSSCSCCCCSSSCCCC
T ss_pred CCEeccCCcccCCe--EEc--CCCChhhHHHHHHHHHcCCCCCCCCCCCCcC
Confidence 45799999865533 333 7999999999875544223467899998543
No 63
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=86.71 E-value=0.47 Score=33.86 Aligned_cols=47 Identities=19% Similarity=0.335 Sum_probs=32.5
Q ss_pred eeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCc
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
..|.||......+...+....|+-.||..|+...... ...||.|+..
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~---~~~CP~Cr~~ 52 (55)
T 1iym_A 6 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS---HSTCPLCRLT 52 (55)
T ss_dssp CCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT---CCSCSSSCCC
T ss_pred CcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc---CCcCcCCCCE
Confidence 3599998765443244555579999999998755442 3579999843
No 64
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=86.48 E-value=0.57 Score=35.94 Aligned_cols=48 Identities=23% Similarity=0.365 Sum_probs=31.4
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
...|.||....... ..+.--.|+-.||..|+.-... ....||.|+...
T Consensus 15 ~~~C~IC~~~~~~~-~~~~~~~C~H~fc~~Ci~~~~~---~~~~CP~Cr~~~ 62 (78)
T 2ect_A 15 GLECPVCKEDYALG-ESVRQLPCNHLFHDSCIVPWLE---QHDSCPVCRKSL 62 (78)
T ss_dssp SCCCTTTTSCCCTT-SCEEECTTSCEEETTTTHHHHT---TTCSCTTTCCCC
T ss_pred CCCCeeCCccccCC-CCEEEeCCCCeecHHHHHHHHH---cCCcCcCcCCcc
Confidence 35699998765443 2222235888999999865433 235899998544
No 65
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=85.64 E-value=0.25 Score=37.10 Aligned_cols=48 Identities=21% Similarity=0.258 Sum_probs=31.1
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
...|.||......+ ..+..-.|+-.||..|+...... ...||.|+...
T Consensus 14 ~~~C~IC~~~~~~~-~~~~~~~C~H~fc~~Ci~~~~~~---~~~CP~Cr~~~ 61 (69)
T 2kiz_A 14 EEKCTICLSILEEG-EDVRRLPCMHLFHQVCVDQWLIT---NKKCPICRVDI 61 (69)
T ss_dssp CCSBTTTTBCCCSS-SCEEECTTSCEEEHHHHHHHHHH---CSBCTTTCSBS
T ss_pred CCCCeeCCccccCC-CcEEEeCCCCHHHHHHHHHHHHc---CCCCcCcCccc
Confidence 34699998765433 23344469999999998643321 23599998543
No 66
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.75 E-value=1.1 Score=32.11 Aligned_cols=44 Identities=23% Similarity=0.411 Sum_probs=29.4
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCC
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKC 337 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C 337 (444)
...|.||.....+. .++ .|+-.||..|+............||.|
T Consensus 15 ~~~C~IC~~~~~~p-~~~---~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 15 EASCSVCLEYLKEP-VII---ECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCBCSSSCCBCSSC-CCC---SSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred CCCCccCCcccCcc-EeC---CCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 35799999876554 232 588889999986543322245778877
No 67
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.35 E-value=1.1 Score=35.59 Aligned_cols=48 Identities=25% Similarity=0.545 Sum_probs=34.2
Q ss_pred CCceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCC
Q psy5823 288 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSK 339 (444)
Q Consensus 288 ~~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~ 339 (444)
..+..|.||......+ +.|..|+..||..|+.--.... ..=.||.|..
T Consensus 13 ~~i~~C~IC~~~i~~g---~~C~~C~h~fH~~Ci~kWl~~~-~~~~CP~Cr~ 60 (74)
T 2ct0_A 13 DAVKICNICHSLLIQG---QSCETCGIRMHLPCVAKYFQSN-AEPRCPHCND 60 (74)
T ss_dssp SSSCBCSSSCCBCSSS---EECSSSCCEECHHHHHHHSTTC-SSCCCTTTCS
T ss_pred CCCCcCcchhhHcccC---CccCCCCchhhHHHHHHHHHhc-CCCCCCCCcC
Confidence 3456799999865533 5788999999999997544421 1246999984
No 68
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.20 E-value=0.59 Score=34.43 Aligned_cols=44 Identities=23% Similarity=0.494 Sum_probs=28.6
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCC
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKC 337 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C 337 (444)
...|.||......- .+. .|+-.||..|+.-..........||.|
T Consensus 20 ~~~C~IC~~~~~~p--~~~--~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 20 EVICPICLDILQKP--VTI--DCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCBCTTTCSBCSSC--EEC--TTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred CCCCCcCCchhCCe--EEe--CCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 45799998765543 333 799889999986433211234678877
No 69
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.03 E-value=0.6 Score=36.29 Aligned_cols=51 Identities=22% Similarity=0.315 Sum_probs=33.6
Q ss_pred ceeccccCCCCCCCCC-eeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLP-MIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~-mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
...|.||......+.. .+.- .|+-.||..|+.-..........||.|....
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 66 (88)
T 2ct2_A 15 VLECPICMESFTEEQLRPKLL-HCGHTICRQCLEKLLASSINGVRCPFCSKIT 66 (88)
T ss_dssp CCBCTTTCCBCCTTSSCEEEC-SSSCEEEHHHHHHHHHHCSSCBCCTTTCCCB
T ss_pred CCCCccCCccccccCCCeEEC-CCCChhhHHHHHHHHHcCCCCcCCCCCCCcc
Confidence 4569999976654312 3332 6999999999865433222358899998544
No 70
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=81.92 E-value=0.87 Score=37.17 Aligned_cols=31 Identities=26% Similarity=0.592 Sum_probs=25.0
Q ss_pred CceeccccCCCCCCCCCeeecCC--CCCccccccc
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDG--CDAWYHWVCV 321 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~--C~~WfH~~Cv 321 (444)
|...|.+|+....|. .|+|.. |..+||..|.
T Consensus 16 ~~l~C~iC~~~~~GA--ciqC~~~~C~~~fHv~CA 48 (87)
T 2lq6_A 16 WKLTCYLCKQKGVGA--SIQCHKANCYTAFHVTCA 48 (87)
T ss_dssp CCCCBTTTTBCCSSC--EEECSCTTTCCEEEHHHH
T ss_pred hcCCCcCCCCCCCcE--eEecCCCCCCCcCcHHHH
Confidence 456799998754454 899986 9999999995
No 71
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.51 E-value=0.93 Score=36.15 Aligned_cols=50 Identities=24% Similarity=0.519 Sum_probs=31.5
Q ss_pred eccccCCCCCCCCCeee---cCCCCCcccccccccCCCCCCCceecCCCCCccc
Q psy5823 292 ICPACGVQDDGSLPMIG---CDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVDE 342 (444)
Q Consensus 292 ~C~VC~~~ddg~~~mI~---CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~~ 342 (444)
.|.||...++.+..+|. |.++..+||..|+..-.... +...|+.|.....
T Consensus 17 ~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~-~~~~CplCr~~~~ 69 (80)
T 2d8s_A 17 ICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSS-DTRCCELCKYEFI 69 (80)
T ss_dssp CCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHH-CCSBCSSSCCBCC
T ss_pred CCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhC-CCCCCCCCCCeee
Confidence 69999865543224553 23335999999996543311 2368999986553
No 72
>2e61_A Zinc finger CW-type PWWP domain protein 1; ZF-CW domain, structural genomics, NPPSFA, national project protein structural and functional analyses; NMR {Homo sapiens} PDB: 2rr4_A*
Probab=78.73 E-value=1.7 Score=34.30 Aligned_cols=32 Identities=19% Similarity=0.611 Sum_probs=21.5
Q ss_pred CCeeecC--CCCCcccccccccCCCCCCCceecCC
Q psy5823 304 LPMIGCD--GCDAWYHWVCVGLVAEPETSDWFCPK 336 (444)
Q Consensus 304 ~~mI~CD--~C~~WfH~~CvG~~~~~~~~~w~Cp~ 336 (444)
..||||| .|..|=.+. .++.....++.|+|..
T Consensus 16 ~~WVQCd~p~C~KWR~LP-~~~~~~~lpd~W~C~m 49 (69)
T 2e61_A 16 LVWVQCSFPNCGKWRRLC-GNIDPSVLPDNWSCDQ 49 (69)
T ss_dssp CCEEECSSTTTCCEEECC-SSCCTTTSCTTCCGGG
T ss_pred CeEEEeCccccCcccCCc-cccccccCCCcCEeCC
Confidence 3799999 999997652 2222223456899964
No 73
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=77.11 E-value=0.83 Score=36.57 Aligned_cols=47 Identities=21% Similarity=0.479 Sum_probs=31.1
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
...|.||......+ ..+..-.|+-.||..|+..... ....||.|+..
T Consensus 40 ~~~C~IC~~~~~~~-~~~~~l~C~H~Fh~~Ci~~wl~---~~~~CP~Cr~~ 86 (91)
T 2l0b_A 40 EMCCPICCSEYVKG-DVATELPCHHYFHKPCVSIWLQ---KSGTCPVCRCM 86 (91)
T ss_dssp CSEETTTTEECCTT-CEEEEETTTEEEEHHHHHHHHT---TTCBCTTTCCB
T ss_pred CCCCcccChhhcCC-CcEEecCCCChHHHHHHHHHHH---cCCcCcCcCcc
Confidence 34699998655433 2333334999999999875443 23489999854
No 74
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=76.79 E-value=0.73 Score=32.71 Aligned_cols=47 Identities=23% Similarity=0.393 Sum_probs=31.6
Q ss_pred eeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCc
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
..|.||......+...+..-.|+-.||..|+...... ...||.|...
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~~ 52 (55)
T 2ecm_A 6 SGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKE---GYRCPLCSGP 52 (55)
T ss_dssp CSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHH---TCCCTTSCCS
T ss_pred CcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHc---CCcCCCCCCc
Confidence 4699998765332135556679999999998643331 1679999853
No 75
>2l7p_A Histone-lysine N-methyltransferase ASHH2; CW-domain; NMR {Arabidopsis thaliana}
Probab=75.92 E-value=0.73 Score=38.98 Aligned_cols=31 Identities=29% Similarity=0.769 Sum_probs=21.8
Q ss_pred CeeecCCCCCcccccccccCCC-CCCCceecCC
Q psy5823 305 PMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPK 336 (444)
Q Consensus 305 ~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~ 336 (444)
.|||||.|..|=.+. .++... ...+.|+|..
T Consensus 27 ~WVQCD~C~KWRrLP-~~~~~~~~~pd~W~C~m 58 (100)
T 2l7p_A 27 AWVRCDDCFKWRRIP-ASVVGSIDESSRWICMN 58 (100)
T ss_dssp EEEECTTTCCEEEEC-HHHHTTSTTSSCCCGGG
T ss_pred eEEeeCCCCccccCC-hhHccccCCCCCceeCC
Confidence 699999999997765 333222 2347899965
No 76
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=75.29 E-value=2.9 Score=34.35 Aligned_cols=35 Identities=26% Similarity=0.626 Sum_probs=28.6
Q ss_pred CeeecCCCC-CcccccccccCCCCCCCceecCCCCCcc
Q psy5823 305 PMIGCDGCD-AWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 305 ~mI~CD~C~-~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
.+|+|..|. ..-|..|..+.. ....|.|..|....
T Consensus 45 ~L~lC~~Cgs~gtH~~Cs~l~~--~~~~weC~~C~~v~ 80 (85)
T 1weq_A 45 RLILCATCGSHGTHRDCSSLRP--NSKKWECNECLPAS 80 (85)
T ss_dssp BCEECSSSCCCEECSGGGTCCT--TCSCCCCTTTSCCS
T ss_pred EEEeCcccCCchhHHHHhCCcC--CCCCEECCcCcccc
Confidence 689999999 889999998753 34579999999543
No 77
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.29 E-value=0.79 Score=34.98 Aligned_cols=48 Identities=19% Similarity=0.436 Sum_probs=32.0
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
...|.||....... ..+..-.|+-.||..|+...... ...||.|+...
T Consensus 23 ~~~C~IC~~~~~~~-~~~~~l~C~H~fh~~Ci~~w~~~---~~~CP~Cr~~~ 70 (75)
T 1x4j_A 23 QTLCVVCMCDFESR-QLLRVLPCNHEFHAKCVDKWLKA---NRTCPICRADS 70 (75)
T ss_dssp CCEETTTTEECCBT-CEEEEETTTEEEETTHHHHHHHH---CSSCTTTCCCC
T ss_pred CCCCeECCcccCCC-CeEEEECCCCHhHHHHHHHHHHc---CCcCcCcCCcC
Confidence 34699999765443 34444569989999998653331 24799998543
No 78
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.55 E-value=2.1 Score=32.31 Aligned_cols=45 Identities=18% Similarity=0.285 Sum_probs=30.3
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
...|.||....... +.. .|+-.||..|+.-... ....||.|....
T Consensus 15 ~~~C~IC~~~~~~~---~~~-~CgH~fC~~Ci~~~~~---~~~~CP~Cr~~~ 59 (71)
T 2d8t_A 15 VPECAICLQTCVHP---VSL-PCKHVFCYLCVKGASW---LGKRCALCRQEI 59 (71)
T ss_dssp CCBCSSSSSBCSSE---EEE-TTTEEEEHHHHHHCTT---CSSBCSSSCCBC
T ss_pred CCCCccCCcccCCC---EEc-cCCCHHHHHHHHHHHH---CCCcCcCcCchh
Confidence 34699998764433 222 5898899999865433 236899998554
No 79
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=74.27 E-value=0.5 Score=35.77 Aligned_cols=48 Identities=21% Similarity=0.438 Sum_probs=30.7
Q ss_pred eeccccCCCCCCCCCeeecCCCC---CcccccccccCCCCCCCceecCCCCCcc
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCD---AWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~---~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
..|.||....++. ++.-| .|. .|+|..|+.--... .+.+.|+.|....
T Consensus 7 ~~CrIC~~~~~~~-l~~PC-~C~gs~~~~H~~Cl~~W~~~-~~~~~C~~C~~~~ 57 (60)
T 1vyx_A 7 PVCWICNEELGNE-RFRAC-GCTGELENVHRSCLSTWLTI-SRNTACQICGVVY 57 (60)
T ss_dssp CEETTTTEECSCC-CCCSC-CCSSGGGSCCHHHHHHHHHH-HTCSBCTTTCCBC
T ss_pred CEeEEeecCCCCc-eecCc-CCCCchhhhHHHHHHHHHHh-CCCCccCCCCCee
Confidence 4699998765544 33333 444 59999998644331 1247899998654
No 80
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.18 E-value=1.2 Score=33.71 Aligned_cols=47 Identities=21% Similarity=0.353 Sum_probs=30.6
Q ss_pred eeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
..|.||.........++.. .|+-.||..|+...... ...||.|+...
T Consensus 16 ~~C~IC~~~~~~~~~~~~~-~C~H~f~~~Ci~~~~~~---~~~CP~Cr~~~ 62 (74)
T 2ep4_A 16 ELCAVCLEDFKPRDELGIC-PCKHAFHRKCLIKWLEV---RKVCPLCNMPV 62 (74)
T ss_dssp CBCSSSCCBCCSSSCEEEE-TTTEEEEHHHHHHHHHH---CSBCTTTCCBC
T ss_pred CCCcCCCcccCCCCcEEEc-CCCCEecHHHHHHHHHc---CCcCCCcCccc
Confidence 4699998875443233332 58999999998643331 13799998543
No 81
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=72.00 E-value=2.4 Score=43.29 Aligned_cols=52 Identities=29% Similarity=0.497 Sum_probs=33.4
Q ss_pred CceeccccCCCCC--CCCCeeecC--CCCCcccccccccCCC--------CCCCceecCCCCCc
Q psy5823 289 QVWICPACGVQDD--GSLPMIGCD--GCDAWYHWVCVGLVAE--------PETSDWFCPKCSKV 340 (444)
Q Consensus 289 ~~~~C~VC~~~dd--g~~~mI~CD--~C~~WfH~~CvG~~~~--------~~~~~w~Cp~C~~~ 340 (444)
....|.||-.... +...-..|+ .|+.-||..|+.--.. ...-.--||.|...
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred CCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCc
Confidence 3456999975442 332345798 7999999999843211 11223579999853
No 82
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=71.76 E-value=1.3 Score=36.31 Aligned_cols=51 Identities=16% Similarity=0.342 Sum_probs=32.4
Q ss_pred eccccCCCCCCC--------------CCeeecCCCCCcccccccccCCC--CCCCceecCCCCCccc
Q psy5823 292 ICPACGVQDDGS--------------LPMIGCDGCDAWYHWVCVGLVAE--PETSDWFCPKCSKVDE 342 (444)
Q Consensus 292 ~C~VC~~~ddg~--------------~~mI~CD~C~~WfH~~CvG~~~~--~~~~~w~Cp~C~~~~~ 342 (444)
.|.||....... ...+..-.|+-+||..|+..... .......||.|+....
T Consensus 27 ~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~ 93 (114)
T 1v87_A 27 DCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYG 93 (114)
T ss_dssp EETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSS
T ss_pred cCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccC
Confidence 699997653221 01233456999999999875432 1124578999996553
No 83
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.44 E-value=2.8 Score=31.04 Aligned_cols=47 Identities=15% Similarity=0.352 Sum_probs=31.9
Q ss_pred CceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
....|.||.....+. .+ -.|+-.||..|+.-... .....||.|....
T Consensus 14 ~~~~C~IC~~~~~~p-~~---~~CgH~fC~~Ci~~~~~--~~~~~CP~Cr~~~ 60 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSP-KQ---TECGHRFCESCMAALLS--SSSPKCTACQESI 60 (66)
T ss_dssp CCEECTTTCCEESSC-CC---CSSSCCCCHHHHHHHHT--TSSCCCTTTCCCC
T ss_pred cCCCCCCCChHhcCe-eE---CCCCCHHHHHHHHHHHH--hCcCCCCCCCcCC
Confidence 346799998765544 23 27888899999865432 2346799998543
No 84
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.23 E-value=2.5 Score=32.22 Aligned_cols=48 Identities=17% Similarity=0.328 Sum_probs=32.0
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCC---CCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE---PETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~---~~~~~w~Cp~C~~~~ 341 (444)
...|.||......- ++. .|+-.||..|+..... ...+...||.|....
T Consensus 19 ~~~C~IC~~~~~~p--~~~--~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecv_A 19 EVTCPICLELLTQP--LSL--DCGHSFCQACLTANHKKSMLDKGESSCPVCRISY 69 (85)
T ss_dssp CCCCTTTCSCCSSC--BCC--SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSS
T ss_pred CCCCCCCCcccCCc--eeC--CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCcc
Confidence 35799999865543 222 6888899999864322 123467899998544
No 85
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.19 E-value=1.2 Score=34.45 Aligned_cols=45 Identities=13% Similarity=0.300 Sum_probs=30.5
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
...|.||......- .+ -.|+-.||..|+.-... ....||.|....
T Consensus 15 ~~~C~IC~~~~~~p--~~--~~CgH~fC~~Ci~~~~~---~~~~CP~Cr~~~ 59 (81)
T 2csy_A 15 PFRCFICRQAFQNP--VV--TKCRHYFCESCALEHFR---ATPRCYICDQPT 59 (81)
T ss_dssp CSBCSSSCSBCCSE--EE--CTTSCEEEHHHHHHHHH---HCSBCSSSCCBC
T ss_pred CCCCcCCCchhcCe--eE--ccCCCHhHHHHHHHHHH---CCCcCCCcCccc
Confidence 45799998765433 22 36898999999854332 135799998554
No 86
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=67.45 E-value=5.1 Score=30.24 Aligned_cols=48 Identities=17% Similarity=0.322 Sum_probs=32.6
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCC----CCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP----ETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~----~~~~w~Cp~C~~~~ 341 (444)
...|.||.....+- .++ .|+-.||..|+.-.... ......||.|....
T Consensus 12 ~~~C~IC~~~~~~p-~~l---~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~ 63 (79)
T 2egp_A 12 EVTCPICLELLTEP-LSL---DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISY 63 (79)
T ss_dssp CCEETTTTEECSSC-CCC---SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCC
T ss_pred CCCCcCCCcccCCe-eEC---CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcC
Confidence 45799998765543 232 58888999998754431 13468999998554
No 87
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=64.20 E-value=4.9 Score=30.51 Aligned_cols=48 Identities=21% Similarity=0.398 Sum_probs=31.8
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCC---CCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE---PETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~---~~~~~w~Cp~C~~~~ 341 (444)
...|.||....... ++ . .|+-.||..|+..... .......||.|....
T Consensus 19 ~~~C~IC~~~~~~p--~~-~-~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecw_A 19 EVTCPICLELLKEP--VS-A-DCNHSFCRACITLNYESNRNTDGKGNCPVCRVPY 69 (85)
T ss_dssp TTSCTTTCSCCSSC--EE-C-TTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCC
T ss_pred CCCCcCCChhhCcc--ee-C-CCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcC
Confidence 35799998865544 22 2 4888899999864322 123468999998543
No 88
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=63.00 E-value=5.7 Score=33.64 Aligned_cols=38 Identities=13% Similarity=0.240 Sum_probs=29.1
Q ss_pred eccccCCCCCCCCCeeecCCCCCcccccccccCCC-CCCCceec
Q psy5823 292 ICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFC 334 (444)
Q Consensus 292 ~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~C 334 (444)
.|.+|++. .-+.|..|+..||..|+...+. .+.+.|+|
T Consensus 60 ~C~~C~k~-----~~~~C~~Cp~sfC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 60 QCDECSSA-----AVSFCEFCPHSFCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp BCTTTCSB-----CCEECSSSSCEECTTTCTTSCEECTTTTCEE
T ss_pred CCCcCCCC-----CCcCcCCCCcchhhhccCCcceecCCCCcee
Confidence 35566663 2489999999999999987766 56677887
No 89
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=61.43 E-value=3.9 Score=33.29 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=26.8
Q ss_pred eeccccCCCCCCCCCeeecCCCCCcccccccccCCC
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE 326 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~ 326 (444)
..|.+|+.... + +.-.|..|+...|..|+..+..
T Consensus 48 ~~C~~C~~~~~-~-~~Y~C~~C~f~lH~~Ca~~p~~ 81 (89)
T 1v5n_A 48 YTCDKCEEEGT-I-WSYHCDECDFDLHAKCALNEDT 81 (89)
T ss_dssp CCCTTTSCCCC-S-CEEECTTTCCCCCHHHHHCSSC
T ss_pred eEeCCCCCcCC-C-cEEEcCCCCCeEcHHhcCCCCc
Confidence 57999998643 3 4677999999999999876544
No 90
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=60.58 E-value=7.3 Score=28.92 Aligned_cols=42 Identities=26% Similarity=0.519 Sum_probs=23.6
Q ss_pred eeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCc
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
..|.+|+-.++..... --+...-|..-...+++|.||.|...
T Consensus 4 y~C~~CGyvYd~~~Gd--------p~~gi~pGt~f~~lP~dw~CP~Cg~~ 45 (52)
T 1e8j_A 4 YVCTVCGYEYDPAKGD--------PDSGIKPGTKFEDLPDDWACPVCGAS 45 (52)
T ss_dssp EECSSSCCCCCTTTCC--------TTTTCCSSCCTTSSCTTCCCSSSCCC
T ss_pred EEeCCCCeEEcCCcCC--------cccCcCCCCchHHCCCCCcCCCCCCc
Confidence 5688888766532000 11233333333344678999999853
No 91
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=60.49 E-value=2.3 Score=34.46 Aligned_cols=48 Identities=19% Similarity=0.367 Sum_probs=31.9
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
...|.||.....+- .++ .|+-.||..|+.-......+.+.||.|....
T Consensus 21 ~~~C~IC~~~~~~p-~~~---~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 68 (112)
T 1jm7_A 21 ILECPICLELIKEP-VST---KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI 68 (112)
T ss_dssp HTSCSSSCCCCSSC-CBC---TTSCCCCSHHHHHHHHSSSSSCCCTTTSCCC
T ss_pred CCCCcccChhhcCe-EEC---CCCCHHHHHHHHHHHHhCCCCCCCcCCCCcC
Confidence 34699998765443 222 6888999999864433223457899998543
No 92
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.79 E-value=2.1 Score=33.52 Aligned_cols=32 Identities=22% Similarity=0.565 Sum_probs=22.7
Q ss_pred eeecCCCCCcccccccccCCCCCCCceecCCCCCc
Q psy5823 306 MIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 306 mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
.+.--.|+-.||..|+..-.... -.||.|+..
T Consensus 42 ~~~~~~C~H~FH~~Ci~~Wl~~~---~~CP~CR~~ 73 (81)
T 2ecl_A 42 VVVWGECNHSFHNCCMSLWVKQN---NRCPLCQQD 73 (81)
T ss_dssp CEEEETTSCEEEHHHHHHHTTTC---CBCTTTCCB
T ss_pred EEEeCCCCCccChHHHHHHHHhC---CCCCCcCCC
Confidence 34444799999999997654422 389999854
No 93
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=59.62 E-value=3.6 Score=31.34 Aligned_cols=48 Identities=17% Similarity=0.382 Sum_probs=31.7
Q ss_pred CceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCc
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
....|.||.....+- +.-..|+-.||..|+.-..... +...||.|...
T Consensus 14 ~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~~-~~~~CP~Cr~~ 61 (74)
T 2yur_A 14 DELLCLICKDIMTDA---VVIPCCGNSYCDECIRTALLES-DEHTCPTCHQN 61 (74)
T ss_dssp GGGSCSSSCCCCTTC---EECSSSCCEECTTHHHHHHHHS-SSSCCSSSCCS
T ss_pred CCCCCcCCChHHhCC---eEcCCCCCHHHHHHHHHHHHhc-CCCcCCCCCCc
Confidence 346799998765433 3334589899999986443311 24689999854
No 94
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=56.12 E-value=5.4 Score=37.94 Aligned_cols=46 Identities=26% Similarity=0.563 Sum_probs=33.6
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCC
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSK 339 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~ 339 (444)
+..|.+|...-.-+ +.|..|+.-||..|+.--... ...-.||.|..
T Consensus 180 i~~C~iC~~iv~~g---~~C~~C~~~~H~~C~~~~~~~-~~~~~CP~C~~ 225 (238)
T 3nw0_A 180 VKICNICHSLLIQG---QSCETCGIRMHLPCVAKYFQS-NAEPRCPHCND 225 (238)
T ss_dssp CCBCTTTCSBCSSC---EECSSSCCEECHHHHHHHTTT-CSSCBCTTTCC
T ss_pred CCcCcchhhHHhCC---cccCccChHHHHHHHHHHHHh-CCCCCCCCCCC
Confidence 56799999865433 789999999999999653321 12457999974
No 95
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=55.17 E-value=9 Score=30.08 Aligned_cols=49 Identities=20% Similarity=0.480 Sum_probs=31.4
Q ss_pred eeccccCCCCC-CCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCccc
Q psy5823 291 WICPACGVQDD-GSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVDE 342 (444)
Q Consensus 291 ~~C~VC~~~dd-g~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~~ 342 (444)
..|+||..+.. .+...+.| .|+--|+..|+.-... .+.+.||.|+....
T Consensus 12 ~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~--~~~~~CP~CR~~~~ 61 (78)
T 1e4u_A 12 VECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRT--DENGLCPACRKPYP 61 (78)
T ss_dssp CBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTT--SSCSBCTTTCCBCS
T ss_pred CcCCccCccCcccccccccc-CCCCCcCHHHHHHHHh--cCCCCCCCCCCccC
Confidence 46999998653 22123334 6887788888754322 24689999996553
No 96
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=54.67 E-value=10 Score=27.36 Aligned_cols=42 Identities=19% Similarity=0.390 Sum_probs=28.1
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
...|.||......- .++ .|+-.|+..|+.. ....||.|....
T Consensus 6 ~~~C~IC~~~~~~p-~~l---~CgH~fC~~Ci~~------~~~~CP~Cr~~~ 47 (56)
T 1bor_A 6 FLRCQQCQAEAKCP-KLL---PCLHTLCSGCLEA------SGMQCPICQAPW 47 (56)
T ss_dssp CSSCSSSCSSCBCC-SCS---TTSCCSBTTTCSS------SSSSCSSCCSSS
T ss_pred CCCceEeCCccCCe-EEc---CCCCcccHHHHcc------CCCCCCcCCcEe
Confidence 45699998765543 333 3776788888754 246799998544
No 97
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.18 E-value=2.6 Score=30.89 Aligned_cols=47 Identities=21% Similarity=0.403 Sum_probs=30.4
Q ss_pred ceeccccCCCCCC----CCCeeecCCCCCcccccccccCCCCCCCceecCCCCCc
Q psy5823 290 VWICPACGVQDDG----SLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 290 ~~~C~VC~~~ddg----~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
...|.||...... + ..+..-.|+-.||..|+...... ...||.|...
T Consensus 15 ~~~C~IC~~~~~~~~~~~-~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~~ 65 (69)
T 2ea6_A 15 TVSCPICMDGYSEIVQNG-RLIVSTECGHVFCSQCLRDSLKN---ANTCPTCRKK 65 (69)
T ss_dssp CCCCTTTCCCHHHHTTTT-CCEEECSSSCEEEHHHHHHHHHH---CSSCTTTCCC
T ss_pred CCCCcccCcccccccccc-CCeEeCCCCChhcHHHHHHHHHc---CCCCCCCCCc
Confidence 3469999875421 2 24445678999999998643221 2479999854
No 98
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=51.84 E-value=3.4 Score=34.59 Aligned_cols=31 Identities=16% Similarity=0.477 Sum_probs=22.4
Q ss_pred eecCCCCCcccccccccCCCCCCCceecCCCCCc
Q psy5823 307 IGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 307 I~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
+.--.|+-.||..|+..-+.. ...||.|+..
T Consensus 68 ~~~~~C~H~FH~~Ci~~Wl~~---~~~CP~Cr~~ 98 (106)
T 3dpl_R 68 VAWGVCNHAFHFHCISRWLKT---RQVCPLDNRE 98 (106)
T ss_dssp EEEETTSCEEEHHHHHHHHTT---CSBCSSSCSB
T ss_pred EeecccCcEECHHHHHHHHHc---CCcCcCCCCc
Confidence 333479999999998765442 3579999854
No 99
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=50.79 E-value=3.8 Score=35.13 Aligned_cols=28 Identities=18% Similarity=0.497 Sum_probs=0.0
Q ss_pred CCCCCcccccccccCCCCCCCceecCCCCCc
Q psy5823 310 DGCDAWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 310 D~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
-.|+-.||..|+..-+.. .-.||.|+..
T Consensus 82 ~~C~H~FH~~CI~~Wl~~---~~~CP~Cr~~ 109 (117)
T 4a0k_B 82 GVCNHAFHFHCISRWLKT---RQVCPLDNRE 109 (117)
T ss_dssp -------------------------------
T ss_pred CCcCceEcHHHHHHHHHc---CCcCCCCCCe
Confidence 369999999998765442 3579999854
No 100
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=49.72 E-value=8.7 Score=31.22 Aligned_cols=44 Identities=25% Similarity=0.594 Sum_probs=25.3
Q ss_pred CceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCc
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
..+.|.+|+-.+++..-.- -+...-|..-...+++|.||.|...
T Consensus 26 ~~y~C~vCGyvYD~~~Gdp--------~~gI~pGT~fedlPddW~CPvCga~ 69 (81)
T 2kn9_A 26 KLFRCIQCGFEYDEALGWP--------EDGIAAGTRWDDIPDDWSCPDCGAA 69 (81)
T ss_dssp CEEEETTTCCEEETTTCBT--------TTTBCTTCCTTTSCTTCCCTTTCCC
T ss_pred ceEEeCCCCEEEcCCcCCc--------ccCcCCCCChhHCCCCCcCCCCCCC
Confidence 3578999997665431010 1222333333344578999999843
No 101
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=49.52 E-value=11 Score=30.93 Aligned_cols=47 Identities=17% Similarity=0.261 Sum_probs=32.4
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCccc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVDE 342 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~~ 342 (444)
...|.||......- .+. .|+-.||..|+.-... .+...||.|.....
T Consensus 15 ~~~C~iC~~~~~~p--~~~--~CgH~fC~~Ci~~~~~--~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 15 ECQCGICMEILVEP--VTL--PCNHTLCKPCFQSTVE--KASLCCPFCRRRVS 61 (115)
T ss_dssp HHBCTTTCSBCSSC--EEC--TTSCEECHHHHCCCCC--TTTSBCTTTCCBCH
T ss_pred CCCCccCCcccCce--eEc--CCCCHHhHHHHHHHHh--HCcCCCCCCCcccC
Confidence 46799999765543 333 6888899999865433 23578999986543
No 102
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=48.26 E-value=5.3 Score=34.14 Aligned_cols=43 Identities=19% Similarity=0.337 Sum_probs=29.0
Q ss_pred eccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 292 ICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 292 ~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
.|.||.....+- .++ .|+-.||..|+.-... ....||.|....
T Consensus 55 ~C~iC~~~~~~~-~~~---~CgH~fc~~Ci~~~~~---~~~~CP~Cr~~~ 97 (138)
T 4ayc_A 55 QCIICSEYFIEA-VTL---NCAHSFCSYCINEWMK---RKIECPICRKDI 97 (138)
T ss_dssp BCTTTCSBCSSE-EEE---TTSCEEEHHHHHHHTT---TCSBCTTTCCBC
T ss_pred CCcccCcccCCc-eEC---CCCCCccHHHHHHHHH---cCCcCCCCCCcC
Confidence 599998765443 222 5888999999864433 235699998543
No 103
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.66 E-value=6.2 Score=29.65 Aligned_cols=47 Identities=19% Similarity=0.254 Sum_probs=30.8
Q ss_pred CceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
....|.||.....+- +....|+-.||..|+.-... ....||.|....
T Consensus 14 ~~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~---~~~~CP~Cr~~~ 60 (72)
T 2djb_A 14 PYILCSICKGYLIDA---TTITECLHTFCKSCIVRHFY---YSNRCPKCNIVV 60 (72)
T ss_dssp GGGSCTTTSSCCSSC---EECSSSCCEECHHHHHHHHH---HCSSCTTTCCCC
T ss_pred CCCCCCCCChHHHCc---CEECCCCCHHHHHHHHHHHH---cCCcCCCcCccc
Confidence 346799998754433 33457888899999854322 135799998543
No 104
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=46.65 E-value=11 Score=28.32 Aligned_cols=14 Identities=36% Similarity=0.954 Sum_probs=10.7
Q ss_pred CCCCceecCCCCCc
Q psy5823 327 PETSDWFCPKCSKV 340 (444)
Q Consensus 327 ~~~~~w~Cp~C~~~ 340 (444)
..+++|.||.|...
T Consensus 32 ~lP~dw~CP~Cg~~ 45 (54)
T 4rxn_A 32 DIPDDWVCPLCGVG 45 (54)
T ss_dssp GSCTTCBCTTTCCB
T ss_pred HCCCCCcCcCCCCc
Confidence 34578999999843
No 105
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=46.28 E-value=4.2 Score=35.68 Aligned_cols=47 Identities=19% Similarity=0.381 Sum_probs=33.2
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
...|.||.....+ .+.+-.|+-+||..|+.-... .+...||.|....
T Consensus 54 ~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~--~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 54 ELMCPICLDMLKN---TMTTKECLHRFCADCIITALR--SGNKECPTCRKKL 100 (165)
T ss_dssp HHBCTTTSSBCSS---EEEETTTCCEEEHHHHHHHHH--TTCCBCTTTCCBC
T ss_pred CCCCcccChHhhC---cCEeCCCCChhHHHHHHHHHH--hCcCCCCCCCCcC
Confidence 4679999875443 455568999999999864433 1257899998554
No 106
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=45.16 E-value=12 Score=29.49 Aligned_cols=43 Identities=19% Similarity=0.364 Sum_probs=23.4
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
.+.|.+|+-.++...-. --+...-|..-...+++|.||.|...
T Consensus 7 ~y~C~vCGyiYd~~~Gd--------p~~gi~pGT~f~~lPddw~CP~Cga~ 49 (70)
T 1dx8_A 7 KYECEACGYIYEPEKGD--------KFAGIPPGTPFVDLSDSFMCPACRSP 49 (70)
T ss_dssp CEEETTTCCEECTTTCC--------TTTTCCSSCCGGGSCTTCBCTTTCCB
T ss_pred eEEeCCCCEEEcCCCCC--------cccCcCCCCchhhCCCCCcCCCCCCC
Confidence 46788888665543000 01222233322334578999999843
No 107
>2e2z_A TIM15; protein import, zinc finger, protein transport, chaperone regulator; NMR {Saccharomyces cerevisiae}
Probab=44.72 E-value=4.4 Score=34.25 Aligned_cols=27 Identities=19% Similarity=0.572 Sum_probs=20.4
Q ss_pred ceeccccCC---------CCCCCCCeeecCCCCCcc
Q psy5823 290 VWICPACGV---------QDDGSLPMIGCDGCDAWY 316 (444)
Q Consensus 290 ~~~C~VC~~---------~ddg~~~mI~CD~C~~Wf 316 (444)
.+.|.+|+. .+..+..+|+|++|..|+
T Consensus 13 ~FTC~~C~tRs~k~iSk~aY~~GvViv~C~gC~n~H 48 (100)
T 2e2z_A 13 AFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRH 48 (100)
T ss_dssp EEEETTTTEEEEEEEEHHHHHTSEEEEECTTTCCEE
T ss_pred EEEccCCCCcchhhcCHHHhhCCEEEEEcCCCccce
Confidence 467999984 334455899999999974
No 108
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=43.97 E-value=8.7 Score=31.63 Aligned_cols=43 Identities=33% Similarity=0.612 Sum_probs=24.7
Q ss_pred CceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCC
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSK 339 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~ 339 (444)
..+.|.+|+-.+++.... --+...-|..-...+++|.||.|..
T Consensus 34 ~~y~C~vCGyvYD~~~Gd--------p~~gI~pGT~fedlPddW~CPvCga 76 (87)
T 1s24_A 34 LKWICITCGHIYDEALGD--------EAEGFTPGTRFEDIPDDWCCPDCGA 76 (87)
T ss_dssp CEEEETTTTEEEETTSCC--------TTTTCCSCCCGGGCCTTCCCSSSCC
T ss_pred ceEECCCCCeEecCCcCC--------cccCcCCCCChhHCCCCCCCCCCCC
Confidence 467899999766543101 0123333333334456899999984
No 109
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=43.17 E-value=3.6 Score=33.29 Aligned_cols=47 Identities=19% Similarity=0.389 Sum_probs=33.7
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
...|.||..... ..+.|-.|+-.||..|+....... ...||.|+...
T Consensus 22 ~~~C~IC~~~~~---~p~~~~~CgH~FC~~Ci~~~~~~~--~~~CP~Cr~~~ 68 (100)
T 3lrq_A 22 VFRCFICMEKLR---DARLCPHCSKLCCFSCIRRWLTEQ--RAQCPHCRAPL 68 (100)
T ss_dssp HTBCTTTCSBCS---SEEECTTTCCEEEHHHHHHHHHHT--CSBCTTTCCBC
T ss_pred CCCCccCCcccc---CccccCCCCChhhHHHHHHHHHHC--cCCCCCCCCcC
Confidence 457999998654 256778999999999986443311 16899998543
No 110
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=40.82 E-value=16 Score=28.52 Aligned_cols=35 Identities=26% Similarity=0.414 Sum_probs=27.9
Q ss_pred CceeccccCCCCCC-CCCeeecCCCCCccccccccc
Q psy5823 289 QVWICPACGVQDDG-SLPMIGCDGCDAWYHWVCVGL 323 (444)
Q Consensus 289 ~~~~C~VC~~~ddg-~~~mI~CD~C~~WfH~~CvG~ 323 (444)
.+.+|.+|+..-.| ....+.|..|....|-.|+..
T Consensus 33 ~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 33 QPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp SCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSS
T ss_pred CCcCccccChhhccccccccCcCCCCCcCCHhHHhh
Confidence 46789999986553 225789999999999999865
No 111
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=40.23 E-value=5.2 Score=33.34 Aligned_cols=45 Identities=16% Similarity=0.259 Sum_probs=30.5
Q ss_pred eeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
..|.||.....+- ++. .|+-.||..|+..... ...+.||.|....
T Consensus 53 ~~C~IC~~~~~~p--~~~--~CgH~fC~~Ci~~~~~--~~~~~CP~Cr~~~ 97 (124)
T 3fl2_A 53 FQCICCQELVFRP--ITT--VCQHNVCKDCLDRSFR--AQVFSCPACRYDL 97 (124)
T ss_dssp TBCTTTSSBCSSE--EEC--TTSCEEEHHHHHHHHH--TTCCBCTTTCCBC
T ss_pred CCCCcCChHHcCc--EEe--eCCCcccHHHHHHHHh--HCcCCCCCCCccC
Confidence 4699998765543 222 6888899999854322 2346899998554
No 112
>2jwo_A RAG-2, V(D)J recombination-activating protein 2; phosphoinositide signaling, PHD domain, DNA recombination, DNA-binding, endonuclease, hydrolase; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 2v83_A* 2v85_A* 2v86_A* 2v87_A* 2v88_A* 2v89_A*
Probab=39.92 E-value=18 Score=29.31 Aligned_cols=52 Identities=23% Similarity=0.496 Sum_probs=31.8
Q ss_pred CCCCCceeccccCCC------CCCCCC----eeecCC-CCCcccccccccCCC------CCCCceecCC
Q psy5823 285 GDSKQVWICPACGVQ------DDGSLP----MIGCDG-CDAWYHWVCVGLVAE------PETSDWFCPK 336 (444)
Q Consensus 285 ed~~~~~~C~VC~~~------ddg~~~----mI~CD~-C~~WfH~~CvG~~~~------~~~~~w~Cp~ 336 (444)
+.+.|+.-|..|+.. ..+..+ ||.|.. =+.|.|..|+++... .....|||..
T Consensus 7 etGYWI~Cc~~c~~dvntw~p~ystel~kpami~cs~g~ghwvhaqcm~l~e~~l~~lsq~n~ky~c~~ 75 (82)
T 2jwo_A 7 EFGYWITCCPTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLEERTLIHLSEGSNKYYCNE 75 (82)
T ss_dssp SCSSCSCSSTTCCCCTTTCCCCSSSCSSSCCCEECCSSSCCEECSGGGTCCHHHHHHHTTSSCCCCCST
T ss_pred cCceEEEecCccccCcccccccccchhcchhhhhcCCCcchHHHHHHhhHHHHHHHHHhcCCcEEEEcC
Confidence 345677778778742 222222 666642 378999999887644 3345677764
No 113
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=39.41 E-value=9 Score=28.99 Aligned_cols=45 Identities=16% Similarity=0.234 Sum_probs=30.9
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
...|.+|.....+- ++. .|+..|+..|+.-... .+...||.|...
T Consensus 8 ~~~C~IC~~~~~~P--v~~--~CgH~fc~~Ci~~~~~--~~~~~CP~C~~~ 52 (78)
T 1t1h_A 8 YFRCPISLELMKDP--VIV--STGQTYERSSIQKWLD--AGHKTCPKSQET 52 (78)
T ss_dssp SSSCTTTSCCCSSE--EEE--TTTEEEEHHHHHHHHT--TTCCBCTTTCCB
T ss_pred cCCCCCccccccCC--EEc--CCCCeecHHHHHHHHH--HCcCCCCCCcCC
Confidence 45799999865443 333 5998899999754333 235789999854
No 114
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=39.22 E-value=6.6 Score=32.68 Aligned_cols=48 Identities=23% Similarity=0.526 Sum_probs=35.6
Q ss_pred eeccccCCC----CCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 291 WICPACGVQ----DDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 291 ~~C~VC~~~----ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
-+|+||+.. .+|+ ..|.|..|..-.--.|+-.. ...+.-.|+.|...+
T Consensus 17 qiCqiCGD~VG~~~~Ge-~FVAC~eC~FPvCrpCyEYE--rkeG~q~CpqCktrY 68 (93)
T 1weo_A 17 QFCEICGDQIGLTVEGD-LFVACNECGFPACRPCYEYE--RREGTQNCPQCKTRY 68 (93)
T ss_dssp CBCSSSCCBCCBCSSSS-BCCSCSSSCCCCCHHHHHHH--HHTSCSSCTTTCCCC
T ss_pred CccccccCccccCCCCC-EEEeeeccCChhhHHHHHHH--HhccCccccccCCcc
Confidence 379999853 3666 88999999987777776543 334567899999665
No 115
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.64 E-value=19 Score=28.41 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=27.3
Q ss_pred ceeccccCCCCCC-CCCeeecCCCCCccccccccc
Q psy5823 290 VWICPACGVQDDG-SLPMIGCDGCDAWYHWVCVGL 323 (444)
Q Consensus 290 ~~~C~VC~~~ddg-~~~mI~CD~C~~WfH~~CvG~ 323 (444)
..+|.+|+..-.| ....+.|..|....|-.|+..
T Consensus 28 pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 28 PTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp CCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGT
T ss_pred CcChhhcChhhccccccccccCCcCCeeChhhhhh
Confidence 4689999986654 225789999999999999875
No 116
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=37.96 E-value=13 Score=27.87 Aligned_cols=14 Identities=36% Similarity=1.030 Sum_probs=10.7
Q ss_pred CCCCceecCCCCCc
Q psy5823 327 PETSDWFCPKCSKV 340 (444)
Q Consensus 327 ~~~~~w~Cp~C~~~ 340 (444)
..+++|.||.|...
T Consensus 32 ~lP~dw~CP~Cga~ 45 (55)
T 2v3b_B 32 DIPADWVCPDCGVG 45 (55)
T ss_dssp GSCTTCCCTTTCCC
T ss_pred HCCCCCcCCCCCCC
Confidence 34578999999843
No 117
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=37.89 E-value=4.6 Score=33.65 Aligned_cols=33 Identities=21% Similarity=0.349 Sum_probs=24.6
Q ss_pred eccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCC
Q psy5823 292 ICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCS 338 (444)
Q Consensus 292 ~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~ 338 (444)
+|.+|++. -|+.|+..||..|+|.+ .|.|..|.
T Consensus 9 ~C~~C~~~--------~C~~C~~c~~~~~~~~~------~~~~~~c~ 41 (117)
T 4bbq_A 9 KCKACVQG--------ECGVCHYCRDMKKFGGP------GRMKQSCV 41 (117)
T ss_dssp CSHHHHSC--------CCSCSHHHHHSGGGTSC------CCSCCCCG
T ss_pred cCcCcCCc--------CCCCCCCCcCCcccCCC------Cccccchh
Confidence 46667663 29999999999999875 36666665
No 118
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=37.76 E-value=9.4 Score=37.84 Aligned_cols=40 Identities=28% Similarity=0.753 Sum_probs=26.3
Q ss_pred ceeccccCCCC----------CCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCc
Q psy5823 290 VWICPACGVQD----------DGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 290 ~~~C~VC~~~d----------dg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
..+|+|||... .++.-++.|..|+.-+|+ ..+.|+.|...
T Consensus 182 ~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~-----------~R~~C~~Cg~~ 231 (309)
T 2fiy_A 182 RTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHY-----------VRIKCSHCEES 231 (309)
T ss_dssp CSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEEC-----------CTTSCSSSCCC
T ss_pred CCCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEee-----------cCcCCcCCCCC
Confidence 35899999532 123247889999955553 24679999843
No 119
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=37.53 E-value=15 Score=27.25 Aligned_cols=14 Identities=36% Similarity=1.018 Sum_probs=10.7
Q ss_pred CCCCceecCCCCCc
Q psy5823 327 PETSDWFCPKCSKV 340 (444)
Q Consensus 327 ~~~~~w~Cp~C~~~ 340 (444)
..+++|.||.|...
T Consensus 31 ~lP~dw~CP~Cg~~ 44 (52)
T 1yk4_A 31 DLPDDWVCPLCGAP 44 (52)
T ss_dssp GSCTTCBCTTTCCB
T ss_pred HCCCCCcCCCCCCC
Confidence 34578999999843
No 120
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=37.36 E-value=11 Score=29.23 Aligned_cols=50 Identities=22% Similarity=0.418 Sum_probs=33.6
Q ss_pred eeccccCCCCCCCCCeeecCCCCCcccccccccCC-CCCCCceecCCCCCc
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVA-EPETSDWFCPKCSKV 340 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~-~~~~~~w~Cp~C~~~ 340 (444)
..|.+|...-..+..--.|-.|..-+-..|-|-.. ......|+|..|...
T Consensus 10 ~~C~iC~KTKFADG~Gh~C~yCk~r~CaRCGg~v~lr~~k~~WvC~lC~k~ 60 (62)
T 2a20_A 10 PTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRKQ 60 (62)
T ss_dssp CCCSSSSCSCCCSSCCEEBTTTCCEECTTSEEEEESSTTCEEEEEHHHHHH
T ss_pred chhhhhccceeccCCCccccccCCeeecccCCEeeecCCeEEEEehhhhhc
Confidence 36999986542221245788888888888866333 344557999999743
No 121
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=36.90 E-value=16 Score=25.64 Aligned_cols=34 Identities=24% Similarity=0.434 Sum_probs=26.9
Q ss_pred ceeccccCCCCCC-CCCeeecCCCCCccccccccc
Q psy5823 290 VWICPACGVQDDG-SLPMIGCDGCDAWYHWVCVGL 323 (444)
Q Consensus 290 ~~~C~VC~~~ddg-~~~mI~CD~C~~WfH~~CvG~ 323 (444)
+.+|.+|+..-.| ....+.|..|....|-.|+..
T Consensus 11 pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~ 45 (50)
T 1ptq_A 11 PTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 45 (50)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCCcCCCCceeeccCCccCEeCCCCCeECHHHhhh
Confidence 4579999886654 236789999999999999764
No 122
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.16 E-value=9.6 Score=28.19 Aligned_cols=42 Identities=17% Similarity=0.310 Sum_probs=28.4
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCC
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSK 339 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~ 339 (444)
...|.||...... .. -.|+-.||..|+..... ....||.|+.
T Consensus 15 ~~~C~IC~~~~~~--~~---~~CgH~fc~~Ci~~~~~---~~~~CP~Cr~ 56 (70)
T 2ecn_A 15 EEECCICMDGRAD--LI---LPCAHSFCQKCIDKWSD---RHRNCPICRL 56 (70)
T ss_dssp CCCCSSSCCSCCS--EE---ETTTEEECHHHHHHSSC---CCSSCHHHHH
T ss_pred CCCCeeCCcCccC--cc---cCCCCcccHHHHHHHHH---CcCcCCCcCC
Confidence 3569999875433 12 25787899999875433 3567999974
No 123
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=34.03 E-value=10 Score=30.77 Aligned_cols=46 Identities=20% Similarity=0.322 Sum_probs=31.7
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
...|.||.....+ -+....|+-.||..|+.-.... ...||.|....
T Consensus 15 ~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~---~~~CP~Cr~~~ 60 (108)
T 2ckl_A 15 HLMCVLCGGYFID---ATTIIECLHSFCKTCIVRYLET---SKYCPICDVQV 60 (108)
T ss_dssp GTBCTTTSSBCSS---EEEETTTCCEEEHHHHHHHHTS---CSBCTTTCCBS
T ss_pred cCCCccCChHHhC---cCEeCCCCChhhHHHHHHHHHh---CCcCcCCCccc
Confidence 3579999875443 3445679999999998644331 26899998543
No 124
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=33.88 E-value=19 Score=28.19 Aligned_cols=29 Identities=17% Similarity=0.337 Sum_probs=19.0
Q ss_pred CceeccccCCCC--CCCCCeeecCCCCCccc
Q psy5823 289 QVWICPACGVQD--DGSLPMIGCDGCDAWYH 317 (444)
Q Consensus 289 ~~~~C~VC~~~d--dg~~~mI~CD~C~~WfH 317 (444)
++..|++|..+- +.+...+.|..|+.||=
T Consensus 7 eiL~CP~ck~~L~~~~~~~~LiC~~cg~~YP 37 (69)
T 2pk7_A 7 DILACPICKGPLKLSADKTELISKGAGLAYP 37 (69)
T ss_dssp GTCCCTTTCCCCEECTTSSEEEETTTTEEEE
T ss_pred hheeCCCCCCcCeEeCCCCEEEcCCCCcEec
Confidence 356799998642 12124677888888874
No 125
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=33.40 E-value=18 Score=28.25 Aligned_cols=30 Identities=10% Similarity=0.141 Sum_probs=19.6
Q ss_pred CceeccccCCCC--CCCCCeeecCCCCCcccc
Q psy5823 289 QVWICPACGVQD--DGSLPMIGCDGCDAWYHW 318 (444)
Q Consensus 289 ~~~~C~VC~~~d--dg~~~mI~CD~C~~WfH~ 318 (444)
++..|++|..+- +.....+.|..|+.||=.
T Consensus 7 ~iL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI 38 (68)
T 2jr6_A 7 DILVCPVTKGRLEYHQDKQELWSRQAKLAYPI 38 (68)
T ss_dssp CCCBCSSSCCBCEEETTTTEEEETTTTEEEEE
T ss_pred hheECCCCCCcCeEeCCCCEEEcCCCCcEecC
Confidence 456899998642 111147788888888743
No 126
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=33.32 E-value=11 Score=30.05 Aligned_cols=46 Identities=17% Similarity=0.305 Sum_probs=31.4
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
...|.||.....+- +..-.|+-.||..|+.-... ....||.|....
T Consensus 22 ~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~---~~~~CP~Cr~~~ 67 (99)
T 2y43_A 22 LLRCGICFEYFNIA---MIIPQCSHNYCSLCIRKFLS---YKTQCPTCCVTV 67 (99)
T ss_dssp HTBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHHT---TCCBCTTTCCBC
T ss_pred CCCcccCChhhCCc---CEECCCCCHhhHHHHHHHHH---CCCCCCCCCCcC
Confidence 45799998765433 33356888999999864333 236899998544
No 127
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=33.22 E-value=28 Score=26.16 Aligned_cols=34 Identities=26% Similarity=0.487 Sum_probs=26.9
Q ss_pred ceeccccCCCCCC-CCCeeecCCCCCccccccccc
Q psy5823 290 VWICPACGVQDDG-SLPMIGCDGCDAWYHWVCVGL 323 (444)
Q Consensus 290 ~~~C~VC~~~ddg-~~~mI~CD~C~~WfH~~CvG~ 323 (444)
+.+|.+|+..-.| ....+.|..|....|-.|+..
T Consensus 23 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 23 PTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp CCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTT
T ss_pred CcCchhcChhheecCCcccccCCCCCccCHhHHhh
Confidence 4689999986654 225688999999999999864
No 128
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=32.93 E-value=27 Score=24.77 Aligned_cols=31 Identities=19% Similarity=0.349 Sum_probs=25.6
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCccccccccc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL 323 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~ 323 (444)
..+|.+|+..-. ..+.|..|....|-.|+..
T Consensus 14 pt~C~~C~~~l~---qG~~C~~C~~~~H~~C~~~ 44 (52)
T 1faq_A 14 LAFCDICQKFLL---NGFRCQTCGYKFHEHCSTK 44 (52)
T ss_dssp CEECTTSSSEEC---SEEECTTTTCCBCSTTSSS
T ss_pred CcCCCCcccccc---cCCEeCCCCCeEChhHHhh
Confidence 468999988654 3678999999999999874
No 129
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=32.80 E-value=16 Score=28.66 Aligned_cols=30 Identities=13% Similarity=0.387 Sum_probs=19.7
Q ss_pred CceeccccCCCC--CCCCCeeecCCCCCcccc
Q psy5823 289 QVWICPACGVQD--DGSLPMIGCDGCDAWYHW 318 (444)
Q Consensus 289 ~~~~C~VC~~~d--dg~~~mI~CD~C~~WfH~ 318 (444)
++..|++|..+- +.....+.|..|+.||=.
T Consensus 7 ~iL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI 38 (70)
T 2js4_A 7 DILVCPVCKGRLEFQRAQAELVCNADRLAFPV 38 (70)
T ss_dssp CCCBCTTTCCBEEEETTTTEEEETTTTEEEEE
T ss_pred hheECCCCCCcCEEeCCCCEEEcCCCCceecC
Confidence 456799998642 111147788888888743
No 130
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=32.36 E-value=10 Score=27.86 Aligned_cols=45 Identities=20% Similarity=0.340 Sum_probs=29.3
Q ss_pred eeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
..|.||.....+. +..-.|+-.||..|+..... ....||.|....
T Consensus 6 ~~C~IC~~~~~~~---~~~~~C~H~fc~~Ci~~~~~---~~~~CP~Cr~~~ 50 (68)
T 1chc_A 6 ERCPICLEDPSNY---SMALPCLHAFCYVCITRWIR---QNPTCPLCKVPV 50 (68)
T ss_dssp CCCSSCCSCCCSC---EEETTTTEEESTTHHHHHHH---HSCSTTTTCCCC
T ss_pred CCCeeCCccccCC---cEecCCCCeeHHHHHHHHHh---CcCcCcCCChhh
Confidence 3699998764432 23346888899999854322 124799998543
No 131
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=32.35 E-value=17 Score=28.36 Aligned_cols=47 Identities=19% Similarity=0.411 Sum_probs=30.0
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKV 340 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~ 340 (444)
...|.||.....+- + ....|+-.|+..|+.-... ..+...||.|...
T Consensus 13 ~~~C~IC~~~~~~p--~-~~~~CgH~fC~~Ci~~~~~-~~~~~~CP~Cr~~ 59 (92)
T 3ztg_A 13 ELLCLICKDIMTDA--V-VIPCCGNSYCDECIRTALL-ESDEHTCPTCHQN 59 (92)
T ss_dssp TTEETTTTEECSSC--E-ECTTTCCEECHHHHHHHHH-HCTTCCCTTTCCS
T ss_pred CCCCCCCChhhcCc--e-ECCCCCCHHHHHHHHHHHH-hcCCCcCcCCCCc
Confidence 46799999765443 2 2234888888888753322 1124789999854
No 132
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=31.82 E-value=17 Score=28.36 Aligned_cols=29 Identities=24% Similarity=0.479 Sum_probs=18.9
Q ss_pred CceeccccCCCC--CCCCCeeecCCCCCccc
Q psy5823 289 QVWICPACGVQD--DGSLPMIGCDGCDAWYH 317 (444)
Q Consensus 289 ~~~~C~VC~~~d--dg~~~mI~CD~C~~WfH 317 (444)
++..|++|..+- +.....+.|..|+.||=
T Consensus 7 ~iL~CP~ck~~L~~~~~~~~LiC~~cg~~YP 37 (68)
T 2hf1_A 7 EILVCPLCKGPLVFDKSKDELICKGDRLAFP 37 (68)
T ss_dssp EECBCTTTCCBCEEETTTTEEEETTTTEEEE
T ss_pred hheECCCCCCcCeEeCCCCEEEcCCCCcEec
Confidence 356799998642 11114677888888874
No 133
>1hp8_A HU-P8; leukemia, cysteine motif; NMR {Homo sapiens} SCOP: a.17.1.1 PDB: 2hp8_A
Probab=31.72 E-value=49 Score=25.98 Aligned_cols=32 Identities=19% Similarity=0.537 Sum_probs=24.1
Q ss_pred hhhHhhc-C-ChhhHHHHHhhHhhhhcccccccc
Q psy5823 405 PRQCLRE-G-LAPQCEALKNTFFECKRSLLDNRT 436 (444)
Q Consensus 405 ~~eCL~~-~-~~~~C~~L~~~f~eCKR~llD~r~ 436 (444)
+++||.. + ..+-|+.+..++.+|++..++.|+
T Consensus 14 iQ~CL~~N~yd~skCq~~id~L~eCc~~~~~~~S 47 (68)
T 1hp8_A 14 IQKCLQANSYMESKCQAVIQELRKCCAQYPKGRS 47 (68)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHTTSCGGGC
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHccCCC
Confidence 3445553 3 346999999999999998887664
No 134
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.64 E-value=31 Score=27.42 Aligned_cols=34 Identities=32% Similarity=0.484 Sum_probs=27.3
Q ss_pred ceeccccCCCCCC-CCCeeecCCCCCccccccccc
Q psy5823 290 VWICPACGVQDDG-SLPMIGCDGCDAWYHWVCVGL 323 (444)
Q Consensus 290 ~~~C~VC~~~ddg-~~~mI~CD~C~~WfH~~CvG~ 323 (444)
..+|.+|+..-.| ....+.|..|....|-.|+..
T Consensus 28 pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 28 PTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVIN 62 (85)
T ss_dssp CCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTT
T ss_pred CcCCcccCccccccccCCCcCCCcCCccCHhHHhh
Confidence 5689999986654 235789999999999999875
No 135
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=29.61 E-value=30 Score=28.39 Aligned_cols=44 Identities=20% Similarity=0.412 Sum_probs=28.5
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
...|.||.....+- .++ ..|+-.|+..|+.-... ..||.|....
T Consensus 22 ~~~C~IC~~~~~~p-v~~--~~CgH~fC~~Ci~~~~~-----~~CP~Cr~~~ 65 (117)
T 1jm7_B 22 LLRCSRCTNILREP-VCL--GGCEHIFCSNCVSDCIG-----TGCPVCYTPA 65 (117)
T ss_dssp TTSCSSSCSCCSSC-BCC--CSSSCCBCTTTGGGGTT-----TBCSSSCCBC
T ss_pred CCCCCCCChHhhCc-cEe--CCCCCHHHHHHHHHHhc-----CCCcCCCCcC
Confidence 35799998765443 222 25777788888754322 5799998543
No 136
>2k0a_A PRE-mRNA-splicing factor RDS3; zinc finger, topological knot, mRNA processing, nucleus, spliceosome, RNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=29.53 E-value=7.1 Score=33.30 Aligned_cols=49 Identities=16% Similarity=0.402 Sum_probs=32.5
Q ss_pred eeccccCCCCCCCCCeeecCCCC-CcccccccccCCC-CCCCceecCCCCC
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCD-AWYHWVCVGLVAE-PETSDWFCPKCSK 339 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~-~WfH~~CvG~~~~-~~~~~w~Cp~C~~ 339 (444)
..|.+|...-......-.||.|+ .-+...|+--.+. ...+.|||..|..
T Consensus 30 GkC~iCDs~Vrp~~~VrICdeCs~G~~~~rCIiCg~~~g~~dAYYC~eC~~ 80 (109)
T 2k0a_A 30 GKCPICDSYVRPKRKVRVCENCSFGKQAKNCIICNLNVGVNDAFYCWECCR 80 (109)
T ss_dssp TCCTTTCCCCCCCEECEEEHHHHTSSTTSBCTTTSSSBCCEECEECHHHHH
T ss_pred CcccccCCccCCcceEEECCcCCCCCcCCceEEcCCCCCcccceehHhhhh
Confidence 46888887544443445689888 4557788654423 4456899999974
No 137
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=29.13 E-value=34 Score=26.57 Aligned_cols=33 Identities=24% Similarity=0.447 Sum_probs=26.6
Q ss_pred CceeccccCCCCCCCCCeeecCCCCCccccccccc
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL 323 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~ 323 (444)
...+|..|+..- .. ..+.|..|+.-.|..|...
T Consensus 34 ~pt~C~~C~~~l-~~-qG~kC~~C~~~cHkkC~~~ 66 (72)
T 2fnf_X 34 GPGWCDLCGREV-LR-QALRCANCKFTCHSECRSL 66 (72)
T ss_dssp SCCBCTTTSSBC-SS-CCEECTTSSCEECTGGGGG
T ss_pred CCcchhhhhHHH-Hh-CcCccCCCCCeechhhhcc
Confidence 356899998766 33 6789999999999999864
No 138
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=28.97 E-value=23 Score=27.59 Aligned_cols=29 Identities=17% Similarity=0.133 Sum_probs=19.3
Q ss_pred CceeccccCCCC--CCCCCeeecCCCCCccc
Q psy5823 289 QVWICPACGVQD--DGSLPMIGCDGCDAWYH 317 (444)
Q Consensus 289 ~~~~C~VC~~~d--dg~~~mI~CD~C~~WfH 317 (444)
++..|++|..+- +.....+.|..|+.||=
T Consensus 9 eiL~CP~ck~~L~~~~~~g~LvC~~c~~~YP 39 (67)
T 2jny_A 9 EVLACPKDKGPLRYLESEQLLVNERLNLAYR 39 (67)
T ss_dssp CCCBCTTTCCBCEEETTTTEEEETTTTEEEE
T ss_pred HHhCCCCCCCcCeEeCCCCEEEcCCCCcccc
Confidence 456899998642 11114678888888874
No 139
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=26.71 E-value=7.7 Score=28.61 Aligned_cols=47 Identities=21% Similarity=0.385 Sum_probs=31.0
Q ss_pred eeccccCCCCC----CCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 291 WICPACGVQDD----GSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 291 ~~C~VC~~~dd----g~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
..|.||..... ++ ..+..-.|+-.||..|+...... ...||.|....
T Consensus 11 ~~C~IC~~~~~~~~~~~-~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~~~ 61 (71)
T 3ng2_A 11 VSCPICMDGYSEIVQNG-RLIVSTECGHVFCSQCLRDSLKN---ANTCPTCRKKI 61 (71)
T ss_dssp CBCTTTCCBHHHHHTTT-CCEEECTTSCEEEHHHHHHHHHH---CSBCTTTCCBC
T ss_pred CCCcccChhhhcccccc-CCeEeCCCCChHhHHHHHHHHHc---CCCCCCCCCcc
Confidence 46999986532 12 34455689999999998643221 24799998543
No 140
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=25.84 E-value=13 Score=32.56 Aligned_cols=45 Identities=16% Similarity=0.306 Sum_probs=30.2
Q ss_pred eeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
..|.||.....+- .+ -.|+-.||..|+.-.... ..+.||.|....
T Consensus 79 ~~C~IC~~~~~~p--v~--~~CgH~fC~~Ci~~~~~~--~~~~CP~Cr~~~ 123 (150)
T 1z6u_A 79 FMCVCCQELVYQP--VT--TECFHNVCKDCLQRSFKA--QVFSCPACRHDL 123 (150)
T ss_dssp TBCTTTSSBCSSE--EE--CTTSCEEEHHHHHHHHHT--TCCBCTTTCCBC
T ss_pred CEeecCChhhcCC--EE--cCCCCchhHHHHHHHHHh--CCCcCCCCCccC
Confidence 5799998765443 22 278888899997543321 346899998544
No 141
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=25.83 E-value=29 Score=26.20 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=26.7
Q ss_pred ceeccccCCCCCC-CCCeeecCCCCCccccccccc
Q psy5823 290 VWICPACGVQDDG-SLPMIGCDGCDAWYHWVCVGL 323 (444)
Q Consensus 290 ~~~C~VC~~~ddg-~~~mI~CD~C~~WfH~~CvG~ 323 (444)
..+|.+|+..-.| ....+.|..|....|-.|+..
T Consensus 24 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 58 (66)
T 1y8f_A 24 PTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDL 58 (66)
T ss_dssp CCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHH
T ss_pred CcChhhcChhhcccCcceeEcCCCCCeeCHHHHhh
Confidence 4679999986654 125688999999999999865
No 142
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=25.21 E-value=43 Score=33.17 Aligned_cols=35 Identities=29% Similarity=0.446 Sum_probs=27.0
Q ss_pred CceeccccCCCCCC-CCCeeecCCCCCccccccccc
Q psy5823 289 QVWICPACGVQDDG-SLPMIGCDGCDAWYHWVCVGL 323 (444)
Q Consensus 289 ~~~~C~VC~~~ddg-~~~mI~CD~C~~WfH~~CvG~ 323 (444)
....|.+|+..-.| ...-..|..|+..+|..|.+-
T Consensus 356 ~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~ 391 (406)
T 2vrw_B 356 ETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGR 391 (406)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGG
T ss_pred CCCCCccccchhceeCCCCCCCCCCcCccchhhhhh
Confidence 35789999986543 224567999999999999874
No 143
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=24.95 E-value=35 Score=24.73 Aligned_cols=13 Identities=38% Similarity=1.089 Sum_probs=9.9
Q ss_pred CCCceecCCCCCc
Q psy5823 328 ETSDWFCPKCSKV 340 (444)
Q Consensus 328 ~~~~w~Cp~C~~~ 340 (444)
.+++|.||.|...
T Consensus 27 lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 27 LPDDWCCPVCGVS 39 (46)
T ss_dssp SCTTCBCTTTCCB
T ss_pred CCCCCcCcCCCCc
Confidence 3467999999843
No 144
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=24.90 E-value=24 Score=28.72 Aligned_cols=28 Identities=21% Similarity=0.579 Sum_probs=19.1
Q ss_pred CCceeccccCCCC--------CCCCCeeecCCCCCccc
Q psy5823 288 KQVWICPACGVQD--------DGSLPMIGCDGCDAWYH 317 (444)
Q Consensus 288 ~~~~~C~VC~~~d--------dg~~~mI~CD~C~~WfH 317 (444)
.+...| -||... ++. ..+.|++|.-|-.
T Consensus 21 ~y~ypC-rCGd~F~it~edL~~ge-~iv~C~sCSL~I~ 56 (83)
T 1yop_A 21 MFTYPC-PCGDRFQIYLDDMFEGE-KVAVCPSCSLMID 56 (83)
T ss_dssp EEEEEE-TTTEEEEEEHHHHHTTC-CEEECSSSCCEEE
T ss_pred EEEEeC-CCCCeEEECHHHHhCCC-EEEECCCCccEEE
Confidence 345569 498432 444 6899999998864
No 145
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=24.76 E-value=7.1 Score=28.03 Aligned_cols=47 Identities=21% Similarity=0.385 Sum_probs=30.5
Q ss_pred eeccccCCCCC----CCCCeeecCCCCCcccccccccCCCCCCCceecCCCCCcc
Q psy5823 291 WICPACGVQDD----GSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSKVD 341 (444)
Q Consensus 291 ~~C~VC~~~dd----g~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~~~ 341 (444)
..|.||..... ++ ..+..-.|+-.||..|+.-.... ...||.|....
T Consensus 4 ~~C~IC~~~~~~~~~~~-~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~~~ 54 (64)
T 2xeu_A 4 VSCPICMDGYSEIVQNG-RLIVSTECGHVFCSQCLRDSLKN---ANTCPTCRKKI 54 (64)
T ss_dssp CBCTTTCCBHHHHHHTT-CCEEEETTSCEEEHHHHHHHHHH---CSBCTTTCCBC
T ss_pred CCCCccChhhhCccccC-CCEEeCCCCCchhHHHHHHHHHc---CCCCCCCCccC
Confidence 46999986532 22 24455689999999998643221 34799998543
No 146
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=24.53 E-value=29 Score=23.06 Aligned_cols=14 Identities=36% Similarity=0.911 Sum_probs=10.8
Q ss_pred CCceecCCCCCccc
Q psy5823 329 TSDWFCPKCSKVDE 342 (444)
Q Consensus 329 ~~~w~Cp~C~~~~~ 342 (444)
.++|+|+.|...+-
T Consensus 3 ~gDW~C~~C~~~Nf 16 (32)
T 2lk0_A 3 FEDWLCNKCCLNNF 16 (32)
T ss_dssp CSEEECTTTCCEEE
T ss_pred CCCCCcCcCcCCcC
Confidence 57899999986553
No 147
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.50 E-value=1.2e+02 Score=23.49 Aligned_cols=56 Identities=9% Similarity=0.034 Sum_probs=31.6
Q ss_pred ceeccccCCCC---------------CCCCCeeecCCCCCcc---cccccccCCC--CCCCceecCCCCCccccch
Q psy5823 290 VWICPACGVQD---------------DGSLPMIGCDGCDAWY---HWVCVGLVAE--PETSDWFCPKCSKVDEGSR 345 (444)
Q Consensus 290 ~~~C~VC~~~d---------------dg~~~mI~CD~C~~Wf---H~~CvG~~~~--~~~~~w~Cp~C~~~~~~~~ 345 (444)
...|.+|+... .+......|+.|+..| ...-+..-.. .....|.|..|........
T Consensus 19 ~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~ 94 (115)
T 2dmi_A 19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQ 94 (115)
T ss_dssp SEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHH
T ss_pred CEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHH
Confidence 46799998532 1121344599999766 2222222111 2334699999987665443
No 148
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.38 E-value=17 Score=28.25 Aligned_cols=35 Identities=17% Similarity=0.288 Sum_probs=27.0
Q ss_pred CceeccccCCCCCC-CCCeeecCCCCCccccccccc
Q psy5823 289 QVWICPACGVQDDG-SLPMIGCDGCDAWYHWVCVGL 323 (444)
Q Consensus 289 ~~~~C~VC~~~ddg-~~~mI~CD~C~~WfH~~CvG~ 323 (444)
...+|.+|+..-.| ...-+.|..|....|-.|+..
T Consensus 27 ~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 62 (74)
T 2db6_A 27 KPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSY 62 (74)
T ss_dssp SCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGG
T ss_pred CCcCchhcChhhccccCCccccCCCCCccChhHHhh
Confidence 35789999886543 124678999999999999874
No 149
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=24.26 E-value=35 Score=25.51 Aligned_cols=34 Identities=24% Similarity=0.434 Sum_probs=26.4
Q ss_pred ceeccccCCCCCC-CCCeeecCCCCCccccccccc
Q psy5823 290 VWICPACGVQDDG-SLPMIGCDGCDAWYHWVCVGL 323 (444)
Q Consensus 290 ~~~C~VC~~~ddg-~~~mI~CD~C~~WfH~~CvG~ 323 (444)
..+|.+|+..-.| ....+.|..|....|-.|...
T Consensus 20 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 54 (65)
T 3uej_A 20 PTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 54 (65)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCcccccChhhhccCceeeECCCCCCeEchhHhhh
Confidence 4579999876543 225789999999999999864
No 150
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=24.15 E-value=40 Score=29.41 Aligned_cols=48 Identities=25% Similarity=0.518 Sum_probs=34.2
Q ss_pred eeccccCCCCC--CCCCeeecCCCCCcccccccccCCC-CCCCceecCCCCC
Q psy5823 291 WICPACGVQDD--GSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 339 (444)
Q Consensus 291 ~~C~VC~~~dd--g~~~mI~CD~C~~WfH~~CvG~~~~-~~~~~w~Cp~C~~ 339 (444)
..|.+|+.+.+ ++ .-..|-.|..-+-..|-+.... .....|+|..|..
T Consensus 56 ~~C~~C~~~~g~l~~-~g~~C~~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k 106 (134)
T 1zbd_B 56 NRCILCGEQLGMLGS-ASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLE 106 (134)
T ss_dssp SBCSSSCCBCSTTSC-CEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHH
T ss_pred ccccccCCCcccccC-CCCCCCCCCcccccccCCccCCCCCccceechhhHH
Confidence 36999998763 22 3578999987777777765533 3445799999984
No 151
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=23.56 E-value=29 Score=28.60 Aligned_cols=30 Identities=23% Similarity=0.625 Sum_probs=19.9
Q ss_pred CCCceeccccCCCC--------CCCCCeeecCCCCCcccc
Q psy5823 287 SKQVWICPACGVQD--------DGSLPMIGCDGCDAWYHW 318 (444)
Q Consensus 287 ~~~~~~C~VC~~~d--------dg~~~mI~CD~C~~WfH~ 318 (444)
+.+...|+ ||..+ ++. .++.|++|.-|-..
T Consensus 20 ~~y~ypCr-CGd~F~IteedLe~ge-~iv~C~sCSL~IkV 57 (89)
T 2jr7_A 20 ETYFYPCP-CGDNFSITKEDLENGE-DVATCPSCSLIIKV 57 (89)
T ss_dssp TEEEEECT-TSSEEEEEHHHHHHTC-CEEECTTTCCEEEE
T ss_pred CEEEEcCC-CCCEEEECHHHHhCCC-EEEECCCCccEEEE
Confidence 34456694 98532 344 68999999988643
No 152
>3cw2_K Translation initiation factor 2 subunit beta; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2nxu_A 2qmu_C* 3v11_C*
Probab=22.41 E-value=47 Score=29.27 Aligned_cols=29 Identities=28% Similarity=0.391 Sum_probs=17.2
Q ss_pred CCCceeccccCCCC-----CCCCCeeecCCCCCc
Q psy5823 287 SKQVWICPACGVQD-----DGSLPMIGCDGCDAW 315 (444)
Q Consensus 287 ~~~~~~C~VC~~~d-----dg~~~mI~CD~C~~W 315 (444)
-...+.|..|++|+ ++...++-|..|+..
T Consensus 100 I~~yVlC~~C~sPdT~l~k~~r~~~l~C~ACGa~ 133 (139)
T 3cw2_K 100 LKAYVECSTCKSLDTILKKEKKSWYIVCLACGAQ 133 (139)
T ss_dssp SSCCSSCCSSSSSCCCSCSSCSTTTSSCCC----
T ss_pred HHHeeECCCCCCcCcEEEEeCCeEEEEecCCCCC
Confidence 33557899999986 233466777777753
No 153
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=22.21 E-value=53 Score=26.62 Aligned_cols=29 Identities=24% Similarity=0.644 Sum_probs=19.4
Q ss_pred CCceeccccCCCC--------CCCCCeeecCCCCCcccc
Q psy5823 288 KQVWICPACGVQD--------DGSLPMIGCDGCDAWYHW 318 (444)
Q Consensus 288 ~~~~~C~VC~~~d--------dg~~~mI~CD~C~~WfH~ 318 (444)
.+...|+ ||..+ ++. .++.|++|.-|-..
T Consensus 28 ~y~y~Cr-CGd~F~it~edL~~ge-~iv~C~sCSL~I~V 64 (83)
T 1wge_A 28 TYFYPCP-CGDNFAITKEDLENGE-DVATCPSCSLIIKV 64 (83)
T ss_dssp EEEECCS-SSSCEEEEHHHHHTTC-CEEECTTTCCEEEE
T ss_pred EEEEeCC-CCCEEEECHHHHhCCC-EEEECCCCceEEEE
Confidence 3445694 98532 444 68999999988653
No 154
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=21.89 E-value=34 Score=28.06 Aligned_cols=47 Identities=15% Similarity=0.444 Sum_probs=29.4
Q ss_pred CceeccccCCCCCCCCCeeecCCCC-CcccccccccCCC--CCCCceecCC
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCD-AWYHWVCVGLVAE--PETSDWFCPK 336 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~-~WfH~~CvG~~~~--~~~~~w~Cp~ 336 (444)
....|.+|..--.+. +.|||-.-. --|-+.|...... ....+.|||.
T Consensus 14 a~l~CtlC~erLEdt-HFVQCPsv~~HkFCFpCsr~sIk~q~~~~EvyCPS 63 (93)
T 2cs3_A 14 GPLCCTICHERLEDT-HFVQCPSVPSHKFCFPCSRESIKAQGATGEVYCPS 63 (93)
T ss_dssp CSCCCSSSCSCCSST-TSEECSSCSSCEECHHHHHHHHHHHHSSSCCCCTT
T ss_pred CeeEeecchhhhccC-ceeeCCCccCCeeeccccHHHHHhcCCCCcEECCC
Confidence 356799998766666 789998755 3344444433222 3456788884
No 155
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA degradation, allosteric REGU; HET: ADP 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=21.33 E-value=38 Score=37.44 Aligned_cols=29 Identities=24% Similarity=0.748 Sum_probs=22.3
Q ss_pred eeccccCCCCCCCCCeeecCCCCCccccccc
Q psy5823 291 WICPACGVQDDGSLPMIGCDGCDAWYHWVCV 321 (444)
Q Consensus 291 ~~C~VC~~~ddg~~~mI~CD~C~~WfH~~Cv 321 (444)
..|.-||-.+... .|.|-.|+.||...-.
T Consensus 12 ~~c~yc~~~~~~~--~~~c~~~~~wfcn~~~ 40 (802)
T 2xzl_A 12 NSCAYCGIDSAKC--VIKCNSCKKWFCNTKN 40 (802)
T ss_dssp CCCTTTCCCCTTT--EEEETTTCCEEECCCS
T ss_pred hhCcccCCCCCce--EEEeCCCCcEecCCCC
Confidence 4688888865555 9999999999965443
No 156
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=21.04 E-value=41 Score=22.45 Aligned_cols=15 Identities=40% Similarity=1.002 Sum_probs=11.0
Q ss_pred CCceecCCCCCcccc
Q psy5823 329 TSDWFCPKCSKVDEG 343 (444)
Q Consensus 329 ~~~w~Cp~C~~~~~~ 343 (444)
.++|+|+.|...+-.
T Consensus 4 ~gDW~C~~C~~~Nfa 18 (33)
T 2k1p_A 4 ANDWQCKTCSNVNWA 18 (33)
T ss_dssp SSSCBCSSSCCBCCT
T ss_pred CCCcccCCCCCcccc
Confidence 578999999865543
No 157
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=20.72 E-value=13 Score=30.37 Aligned_cols=37 Identities=19% Similarity=0.388 Sum_probs=25.5
Q ss_pred ceeccccCCCC--------CCCCCeeecCCCCCcccccccccCCC
Q psy5823 290 VWICPACGVQD--------DGSLPMIGCDGCDAWYHWVCVGLVAE 326 (444)
Q Consensus 290 ~~~C~VC~~~d--------dg~~~mI~CD~C~~WfH~~CvG~~~~ 326 (444)
.+.|+.|+... ..+...|.|..|+..|++....++..
T Consensus 23 ~F~CPfCnh~~sV~vkidk~~~~g~l~C~~Cg~~~~~~i~~L~ep 67 (85)
T 1wii_A 23 QFTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEFQTPITYLSEP 67 (85)
T ss_dssp CCCCTTTCCSSCEEEEEETTTTEEEEEESSSCCEEEEECCSSCCT
T ss_pred eEcCCCCCCCCeEEEEEEccCCEEEEEcccCCCeEEeccCccCcc
Confidence 56799998642 11236889999999998865555433
No 158
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=20.67 E-value=26 Score=27.68 Aligned_cols=50 Identities=20% Similarity=0.345 Sum_probs=32.6
Q ss_pred ceeccccCCCCCCCCCeeecCCCCCcccccccccCCC-----CCCCceecCC--CCCc
Q psy5823 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-----PETSDWFCPK--CSKV 340 (444)
Q Consensus 290 ~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~-----~~~~~w~Cp~--C~~~ 340 (444)
...|.||.....+. .|+.-..|+-.|...|+.-... .......||. |...
T Consensus 5 ~~~C~IC~~~~~~~-~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 5 SSGCKLCLGEYPVE-QMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp BCCCSSSCCCCBGG-GEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CcCCcccCcccccc-cceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 45699998765544 5776667887777777643222 1123589999 9855
No 159
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=20.44 E-value=40 Score=24.99 Aligned_cols=33 Identities=24% Similarity=0.447 Sum_probs=26.4
Q ss_pred CceeccccCCCCCCCCCeeecCCCCCccccccccc
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL 323 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~ 323 (444)
...+|..|+..- .. ..+.|..|+.-.|-.|...
T Consensus 21 ~pt~C~~C~~~i-~k-qg~kC~~C~~~cH~kC~~~ 53 (59)
T 1rfh_A 21 GPGWCDLCGREV-LR-QALRCANCKFTCHSECRSL 53 (59)
T ss_dssp CCEECTTTCSEE-CS-CCEECTTTSCEECHHHHTT
T ss_pred CCeEchhcchhh-hh-CccEeCCCCCeEehhhhhh
Confidence 356899998765 33 6789999999999999764
No 160
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=20.14 E-value=42 Score=29.96 Aligned_cols=26 Identities=35% Similarity=0.892 Sum_probs=18.3
Q ss_pred ceeccccCCCCC-----CCCCeeecCCCCCc
Q psy5823 290 VWICPACGVQDD-----GSLPMIGCDGCDAW 315 (444)
Q Consensus 290 ~~~C~VC~~~dd-----g~~~mI~CD~C~~W 315 (444)
.+.|..|++|+. +...++-|..|+..
T Consensus 104 yVlC~~C~sPdT~L~k~~r~~~l~C~ACGa~ 134 (148)
T 2d74_B 104 YVICPVCGSPDTKIIKRDRFHFLKCEACGAE 134 (148)
T ss_dssp HSSCSSSCCTTCCCCBSSSSBCCCCSSSCCC
T ss_pred EEECCCCCCcCcEEEEeCCEEEEEecCCCCC
Confidence 478999999872 33366778888754
No 161
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=20.10 E-value=16 Score=31.68 Aligned_cols=45 Identities=18% Similarity=0.482 Sum_probs=30.9
Q ss_pred CceeccccCCCCCCCCCeeecCCCCCcccccccccCCCCCCCceecCCCCC
Q psy5823 289 QVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKCSK 339 (444)
Q Consensus 289 ~~~~C~VC~~~ddg~~~mI~CD~C~~WfH~~CvG~~~~~~~~~w~Cp~C~~ 339 (444)
....|.||......- ++. .|+-.|+..|+..... .+...||.|..
T Consensus 30 ~~~~C~IC~~~~~~p---v~~-~CgH~FC~~Ci~~~~~--~~~~~CP~Cr~ 74 (141)
T 3knv_A 30 AKYLCSACRNVLRRP---FQA-QCGHRYCSFCLASILS--SGPQNCAACVH 74 (141)
T ss_dssp GGGBCTTTCSBCSSE---EEC-TTSCEEEHHHHHHHGG--GSCEECHHHHH
T ss_pred cCcCCCCCChhhcCc---EEC-CCCCccCHHHHHHHHh--cCCCCCCCCCC
Confidence 456799999765433 343 7998899999865432 23478999974
Done!