RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5823
(444 letters)
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 64
Score = 64.3 bits (156), Expect = 5e-14
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 285 GDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE--PETSDWFCPKCSK 339
G S C ACG I CD C+ W+H CV + + CP CS
Sbjct: 1 GSSGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSN 57
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 79
Score = 58.5 bits (141), Expect = 8e-12
Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Query: 290 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE--PETSDWFCPKCSKVDEGSRKE 347
V + C + + MI C C W+H CVG+ E + + CP C + G
Sbjct: 11 VPVYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDC-EAVFGPSIM 69
Query: 348 KKKRGRKKK 356
K
Sbjct: 70 KNWHSGPSS 78
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 72
Score = 56.6 bits (136), Expect = 3e-11
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 296 CGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKCSK 339
CG +DD M+ CDGC W+H C+G+ S + C +C +
Sbjct: 21 CGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIE 65
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1,
Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 76
Score = 55.5 bits (133), Expect = 9e-11
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Query: 296 CGVQDDGSLPMIGCDGCDAWYHWVCVGL------VAEPETSDWFCPKCS 338
C + MI CD C+ W+H CVG+ + E D+ CP C+
Sbjct: 21 CRQPHNNR-FMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCT 68
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription
factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 49.6 bits (118), Expect = 6e-09
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 293 CPACGVQDDGSLPMIGCDGCDAWYHWVCVGL-VAEPETSDWFCPKC 337
C C + + +I CD C+ +H C+ + E +W CP C
Sbjct: 3 CKVCRKKGEDD-KLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 47
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId:
9606]}
Length = 61
Score = 48.0 bits (114), Expect = 3e-08
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Query: 285 GDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL-VAEPETSDWFCPKCS 338
G + C C + ++ CD C + YH C+ + E +W CP+C+
Sbjct: 4 GSDHHMEFCRVCKDGGE----LLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 54
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 78
Score = 47.4 bits (112), Expect = 7e-08
Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 6/62 (9%)
Query: 283 DTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP------ETSDWFCPK 336
D + C + S+ C W H CV L +P ++C
Sbjct: 9 DPFQPEIKVRCVCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEI 68
Query: 337 CS 338
C
Sbjct: 69 CR 70
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 70
Score = 46.9 bits (111), Expect = 9e-08
Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 292 ICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL-VAEPETSDWFCPKCSKVDEGSRKEKKK 350
IC C D ++ C+ C+ +H C + + +W C C + + ++
Sbjct: 9 ICRVCQKPGD----LVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPDLKEEDVDL 64
Query: 351 RGRK 354
+ K
Sbjct: 65 QACK 68
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4
{Homo sapiens [TaxId: 9606]}
Length = 51
Score = 45.7 bits (108), Expect = 1e-07
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 296 CGVQDDGSLPMI-GCDGCDAWYHWVCVGLVAEPETSDWFCPKCSK 339
C G + D W+H+ CVGL +P WFCP+CS+
Sbjct: 7 CHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPR-GKWFCPRCSQ 50
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 88
Score = 46.4 bits (109), Expect = 2e-07
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 293 CPACG-VQDDGSLPMIGCDGCDAWYHWVCVG-----LVAEPETSDWFCPKCSKVDEGSRK 346
C C + ++ C C YH C W+C +C++ + +
Sbjct: 19 CVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKRMAQ 78
Query: 347 EKKKRG 352
+ +K G
Sbjct: 79 KNQKSG 84
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 71
Score = 43.8 bits (103), Expect = 1e-06
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 296 CGVQDDGSLPMIGCDGCD-AWYHWVCVGLVAEPETSDWFCPKC 337
C G + + C W+H+ CV L +P+ W+CPKC
Sbjct: 21 CNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPK-GKWYCPKC 62
>d1twfa_ e.29.1.2 (A:) RBP1 {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 1449
Score = 40.6 bits (94), Expect = 4e-04
Identities = 30/192 (15%), Positives = 67/192 (34%), Gaps = 1/192 (0%)
Query: 39 PPMLQHPLIPQPLVHPPGTPPPSKMKDKVSPKDKTSPKEKMSSKEKTSPKEKEYSKVKDV 98
P L L P + + K T E + S E ++ +
Sbjct: 1112 TPSLTVYLEPGHAADQEQAKLIRSAIEHTTLKSVTIASEIYYDPDPRSTVIPEDEEIIQL 1171
Query: 99 ELGVTPMVPNIVKVTSSEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKE 158
+ S L ++ D++ DK + E+I K+ K D I +++
Sbjct: 1172 HFSLLDEEAEQSFDQQSPWLLRLELDRAAMNDKDLTMGQVGERI-KQTFKNDLFVIWSED 1230
Query: 159 KDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKL 218
D++ + + K + E + E++ +K+ + +E I ++ + D+K+
Sbjct: 1231 NDEKLIIRCRVVRPKSLDAETEAEEDHMLKKIENTMLENITLRGVENIERVVMMKYDRKV 1290
Query: 219 KKEKLKKKKKEK 230
+ K+ +
Sbjct: 1291 PSPTGEYVKEPE 1302
Score = 32.9 bits (74), Expect = 0.088
Identities = 15/131 (11%), Positives = 42/131 (32%), Gaps = 7/131 (5%)
Query: 118 LGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKE----KDKEKKVDKEKEKGK 173
G++ D+ + ++ K+ +K K K+ + +D ++ G
Sbjct: 109 CGKLLLDEHNELMRQALAIKDSKKRFAAIWTLCKTKMVCETDVPSEDDPTQLVSRGGCGN 168
Query: 174 KEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERS 233
+ +K+ + K++ + E ++ + K + + + S
Sbjct: 169 TQPTIRKDGLKLVGSWKKDRATGDADEPELRVLSTEEILNIFKHISVKDFTSLGFNEVFS 228
Query: 234 SHEK---EVIP 241
E +P
Sbjct: 229 RPEWMILTCLP 239
>d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 138
Score = 36.4 bits (84), Expect = 0.002
Identities = 17/105 (16%), Positives = 49/105 (46%)
Query: 125 KSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKE 184
S+ + + ++ ++K++ ++++ + + + EK+ + + K E+ K
Sbjct: 34 ASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKM 93
Query: 185 FKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKE 229
K K ++ K +E + ++ ++KDK ++ + K+ KE
Sbjct: 94 AKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKE 138
Score = 31.0 bits (70), Expect = 0.12
Identities = 17/99 (17%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Query: 137 KEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEE---KEKKEEKEFKMKEDKEK 193
+ ++ ++ KK + + ++ + + + EK + E ++ EE +K KEK
Sbjct: 38 RRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEK 97
Query: 194 PVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKER 232
+K+ +++ E + + + K + ++ +K KE
Sbjct: 98 LAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKEL 136
Score = 30.6 bits (69), Expect = 0.16
Identities = 16/96 (16%), Positives = 46/96 (47%)
Query: 137 KEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVE 196
+ + +++D ++ K E +E++ +E E K ++++ E+E K +E
Sbjct: 31 EFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNF 90
Query: 197 KIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKER 232
+EK ++K + +K+ + L++ +++ +
Sbjct: 91 IKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKH 126
Score = 27.5 bits (61), Expect = 1.8
Identities = 18/101 (17%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 123 KDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEE 182
+ + ++ K + E+ +K ++ + + K + + + + K E+ K KE+
Sbjct: 38 RRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEK 97
Query: 183 KEFKMKEDKEKPVEKIR-KEEKDSEKEKKSKDKDKKLKKEK 222
KM+ +KE + E+ EK+K +++ K + ++
Sbjct: 98 LAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKE 138
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding
protein 1 (GBP1), C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 300
Score = 36.3 bits (83), Expect = 0.006
Identities = 18/123 (14%), Positives = 46/123 (37%)
Query: 116 EDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKE 175
+ K+ + D+ +K K E ++ K +
Sbjct: 165 YEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLH 224
Query: 176 EKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSH 235
E ++K E+ + KE + K E+ ++++ + K++++ L + ++++ KE
Sbjct: 225 EMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQK 284
Query: 236 EKE 238
E
Sbjct: 285 ESR 287
Score = 33.6 bits (76), Expect = 0.039
Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 3/126 (2%)
Query: 116 EDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKE 175
+ L ++KK + K ++ + K K+ ++ + EK+ + E E+ K E
Sbjct: 155 QKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAE 214
Query: 176 EKEKK---EEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKER 232
+ + + E + E+ +E EK D+ + LK+++ K +E+
Sbjct: 215 SAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQ 274
Query: 233 SSHEKE 238
KE
Sbjct: 275 EQLLKE 280
Score = 32.8 bits (74), Expect = 0.071
Identities = 15/113 (13%), Positives = 42/113 (37%)
Query: 120 EIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEK 179
+ T K+KE E + K + E ++ + E+++ +E K
Sbjct: 187 SMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLK 246
Query: 180 KEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKER 232
+ ++ + + ++ K E+E+ K+ +K + + + + +
Sbjct: 247 QLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTK 299
Score = 30.5 bits (68), Expect = 0.36
Identities = 16/115 (13%), Positives = 46/115 (40%), Gaps = 1/115 (0%)
Query: 124 DKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEK 183
++K + KK +E K + ++ ++ + + + ++EKE + E+
Sbjct: 151 RLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVER 210
Query: 184 EFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKE 238
+ + + + E+K + + LK+ +K + ++ + E+E
Sbjct: 211 VKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLT-EKMENDRVQLLKEQE 264
Score = 29.7 bits (66), Expect = 0.72
Identities = 15/101 (14%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Query: 111 KVTSSEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKE 170
+T E E+++ K+ E ++ ++ ++ + + K +K++ ++
Sbjct: 198 TLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRV 257
Query: 171 KGKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKS 211
+ KE++ K++E ++ E +KE + + E +
Sbjct: 258 QLLKEQERTLAL---KLQEQEQLLKEGFQKESRIMKNEIQD 295
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 332
Score = 34.9 bits (80), Expect = 0.016
Identities = 27/129 (20%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 114 SSEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDK--DKIKNKEKDKEKKVDKEKEK 171
S ++K K + +++ + D+KDK +K+ + KD +++ +K +
Sbjct: 203 SRVSAENLQKSLDQMKKQIADVERDVQNFPAATDEKDKFVEKMTSFVKDAQEQYNKLRMM 262
Query: 172 GKKEEKEKKEEKEFKMKEDKEKPVEK--------IRKEEKDSEKEKKSKDKDKKLKKEKL 223
E KE ++ + + K+ VE+ + ++ +K ++ ++K+++ KL
Sbjct: 263 HSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETEEKMRRAKL 322
Query: 224 KKKKKEKER 232
K+K EKER
Sbjct: 323 AKEKAEKER 331
>d1oisa_ e.15.1.1 (A:) Eukaryotic DNA topoisomerase I, N-terminal
DNA-binding fragment {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 223
Score = 34.3 bits (79), Expect = 0.017
Identities = 13/56 (23%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 131 KKTHKKKEKEKIKKKKDKKDKDKIKN---KEKDKEKKVDKEKEKGKKEEKEKKEEK 183
K++ +IK+ + D K+ + +K+++K++ +++K + E+EK EE
Sbjct: 75 KESGGPLNGIEIKEF-SRCDFTKMFDYFQLQKEQKKQLTSQEKKQIRLEREKFEED 129
>d1zroa2 a.264.1.1 (A:283-596) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 314
Score = 34.3 bits (78), Expect = 0.022
Identities = 22/107 (20%), Positives = 40/107 (37%)
Query: 120 EIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEK 179
E D K K K + K K +D K K + ++ KK ++ ++ K+ ++ +
Sbjct: 206 EWGDDYCQDKTKMIETLKVECKEKPCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQ 265
Query: 180 KEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKK 226
K E K E K+ + +D+ K+ K K
Sbjct: 266 KGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNFEDEFKEELHSDYKNK 312
Score = 27.7 bits (61), Expect = 3.0
Identities = 18/97 (18%), Positives = 36/97 (37%)
Query: 151 KDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKK 210
+DK K E K + +K E + K ++ K+++ K +E + K
Sbjct: 213 QDKTKMIETLKVECKEKPCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYKM 272
Query: 211 SKDKDKKLKKEKLKKKKKEKERSSHEKEVIPKLTFKF 247
+ + LKK ++ + E E +L +
Sbjct: 273 YSEFKSIKPEVYLKKYSEKCSNLNFEDEFKEELHSDY 309
Score = 27.3 bits (60), Expect = 3.3
Identities = 17/95 (17%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Query: 118 LGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEK 177
+ +K + K + + K++ K+ KK ++ K ++ +E + K E K
Sbjct: 219 IETLKVECKEKPCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQ-KGNNYKMYSEFK 277
Query: 178 EKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSK 212
K E K +K + + +++ + K+K
Sbjct: 278 SIKPEVYLKKYSEKCSNLNFEDEFKEELHSDYKNK 312
>d1k4ta3 e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase I,
N-terminal DNA-binding fragment {Human (Homo sapiens)
[TaxId: 9606]}
Length = 230
Score = 33.5 bits (77), Expect = 0.032
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 131 KKTHKKKEKEKIK--KKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEK 183
+K +EK I K D + + + K++ KE++ KEE EK ++
Sbjct: 83 RKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 28.1 bits (63), Expect = 1.7
Identities = 15/67 (22%), Positives = 36/67 (53%)
Query: 143 KKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVEKIRKEE 202
+K+ ++K+ I N K ++ + + + K+ +E++ K+KE+ EK +++
Sbjct: 83 RKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKEYGFCI 142
Query: 203 KDSEKEK 209
D+ KE+
Sbjct: 143 MDNHKER 149
>d1zroa1 a.264.1.1 (A:8-282) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 275
Score = 33.8 bits (77), Expect = 0.033
Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)
Query: 134 HKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEK---KEEKEFKMKED 190
+ + K K + KE ++ K E + E + KE+
Sbjct: 183 ERDNRAKLPKSKCKNNALYEACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKEN 242
Query: 191 KEKPVEKIRKEEKDSEKEKKSKDKDKKLKK 220
E + KI + + D++ + D + K
Sbjct: 243 AENYLIKISENKNDAKVSLLLNNCDAEYSK 272
Score = 30.4 bits (68), Expect = 0.37
Identities = 7/75 (9%), Positives = 25/75 (33%), Gaps = 1/75 (1%)
Query: 120 EIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIK-NKEKDKEKKVDKEKEKGKKEEKE 178
++ +K+ K ++ I + K + + +K ++ + K + + +
Sbjct: 197 NNALYEACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKENAENYLIKISENKND 256
Query: 179 KKEEKEFKMKEDKEK 193
K + +
Sbjct: 257 AKVSLLLNNCDAEYS 271
Score = 26.1 bits (57), Expect = 7.8
Identities = 6/53 (11%), Positives = 16/53 (30%)
Query: 129 KDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKE 181
K ++ + +K K+ + + + K K + E +
Sbjct: 220 IRSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDAKVSLLLNNCDAEYSK 272
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse
gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 248
Score = 32.1 bits (72), Expect = 0.095
Identities = 14/125 (11%), Positives = 42/125 (33%), Gaps = 3/125 (2%)
Query: 89 EKEYSKVKDVELGVTPMVPNIVKVTSSEDLGEIKKDKSI-KKDKKTHKKKEKEKIKKKKD 147
+ +++ + V + + ++ E + K + ++ + + I+
Sbjct: 126 YRNVDEIERLLPAVERHIDEVREILKKVMGKERPQAKDVVVREGEVIFPDLRTYIQGSGR 185
Query: 148 KKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEK 207
+ D + E+ K + EFK ++ + EK+ +E +S
Sbjct: 186 TSRLFAGGLTKGASFLLEDDSELLSAFIERAKLYDIEFKSIDEVD--FEKLSRELDESRD 243
Query: 208 EKKSK 212
+ +
Sbjct: 244 RYRRR 248
Score = 30.5 bits (68), Expect = 0.32
Identities = 12/128 (9%), Positives = 45/128 (35%), Gaps = 10/128 (7%)
Query: 109 IVKVTSSEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKE 168
++ + ++++ ++ K+ + K++ + ++ E
Sbjct: 121 LLAYLYRNVDEIERLLPAVERHIDEVREILKKVMGKERPQAKDVVVREGEVIFPDLRTYI 180
Query: 169 KEKGKKEEKEKKEEKEFK--MKEDKEKPVEKIRKEEKDSEKEKKSKDKD------KKLKK 220
+ G+ + + ED + + + K + E KS D+ ++L +
Sbjct: 181 QGSGRTSRLFAGGLTKGASFLLEDDSELLSAFIERAKLYDIEFKSIDEVDFEKLSRELDE 240
Query: 221 --EKLKKK 226
++ +++
Sbjct: 241 SRDRYRRR 248
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment
(residues 410-1202) {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 760
Score = 32.5 bits (73), Expect = 0.11
Identities = 16/105 (15%), Positives = 34/105 (32%), Gaps = 11/105 (10%)
Query: 138 EKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVEK 197
++ + K +++N + K K +E ++ D+E
Sbjct: 618 KELTVTNKPRNAIIQELENLGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESS 677
Query: 198 IRKEEKDSEKEKKSKDKDK-----------KLKKEKLKKKKKEKE 231
E ++ + K + +KL K+K+EKE
Sbjct: 678 HEDTENVINGPEELYGTYEYLLGMRIWSLTKERYQKLLKQKQEKE 722
Score = 27.5 bits (60), Expect = 4.0
Identities = 14/135 (10%), Positives = 41/135 (30%), Gaps = 25/135 (18%)
Query: 108 NIVKVTSSEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDK 167
+ + + E++ + +K+ + + D + E+D+E +
Sbjct: 621 TVTNKPRNAIIQELENLGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHED 680
Query: 168 EKEKGK---------------------KEEKEK----KEEKEFKMKEDKEKPVEKIRKEE 202
+ KE +K K+EKE +++ + + I +
Sbjct: 681 TENVINGPEELYGTYEYLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTD 740
Query: 203 KDSEKEKKSKDKDKK 217
+ + + +
Sbjct: 741 LKAFEVGYQEFLQRD 755
>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding
protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}
Length = 321
Score = 31.5 bits (70), Expect = 0.20
Identities = 16/114 (14%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Query: 132 KTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDK 191
+ + +KK + ++ + K K D+++ + + +KE++++ + + K
Sbjct: 4 SQELTQREANVKKVHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQK 63
Query: 192 EKPVEKIR-KEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKEVIPKLT 244
+ R + E++ E + +K+ LK + + + + P L+
Sbjct: 64 VQNEFDARERAEREREAARGDAAAEKQRLASLLKDLEDDASGYNRLRPSKPMLS 117
>d1rqga1 a.27.1.1 (A:397-606) Methionyl-tRNA synthetase (MetRS)
{Pyrococcus abyssi [TaxId: 29292]}
Length = 210
Score = 30.6 bits (68), Expect = 0.27
Identities = 9/77 (11%), Positives = 26/77 (33%)
Query: 113 TSSEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKG 172
+ E+ ++K + KK ++I + K K ++
Sbjct: 128 VKRWEFRELPAGHKVRKPEILFKKVTDDQIIYFILNYMAKGNPEGARILLDKYYKREDVI 187
Query: 173 KKEEKEKKEEKEFKMKE 189
+ +++ +E E ++
Sbjct: 188 RVAKEKFGDEAEVVLRR 204
>d2c6ja1 a.264.1.1 (A:15-308) Duffy receptor, alpha form {Plasmodium
knowlesi [TaxId: 5850]}
Length = 294
Score = 30.4 bits (68), Expect = 0.43
Identities = 13/103 (12%), Positives = 30/103 (29%), Gaps = 1/103 (0%)
Query: 129 KDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMK 188
+ + K EK K + K + KK++ + K +K
Sbjct: 187 SELPKEQGKLNEKCASKLYYNNMAICMLPLCHDACKSYDQWITRKKKQWDVLSTKFSSVK 246
Query: 189 EDKEKPVEKIRK-EEKDSEKEKKSKDKDKKLKKEKLKKKKKEK 230
+ ++ E I + ++ K+ + + K
Sbjct: 247 KTQKIGTENIATAYDILKQELNGFKEATFENEINKRDNLYNHL 289
Score = 27.7 bits (61), Expect = 2.6
Identities = 13/94 (13%), Positives = 34/94 (36%), Gaps = 2/94 (2%)
Query: 145 KKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKD 204
+ K++ K+ K K + K ++ K+K + + +
Sbjct: 187 SELPKEQGKLNEKCASKLYYNNMAICMLPLCHDACKSYDQWI--TRKKKQWDVLSTKFSS 244
Query: 205 SEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKE 238
+K +K ++ + LK++ + ++ E E
Sbjct: 245 VKKTQKIGTENIATAYDILKQELNGFKEATFENE 278
Score = 27.3 bits (60), Expect = 3.3
Identities = 11/71 (15%), Positives = 23/71 (32%)
Query: 123 KDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEE 182
D D+ +KK++ + K K K ++ D K++ ++ E
Sbjct: 218 HDACKSYDQWITRKKKQWDVLSTKFSSVKKTQKIGTENIATAYDILKQELNGFKEATFEN 277
Query: 183 KEFKMKEDKEK 193
+ K
Sbjct: 278 EINKRDNLYNH 288
Score = 26.9 bits (59), Expect = 4.9
Identities = 10/97 (10%), Positives = 27/97 (27%), Gaps = 1/97 (1%)
Query: 135 KKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKP 194
+ KE+ K + K N + + KK++ + +
Sbjct: 187 SELPKEQGKLNEKCASKLYYNNMAICMLPLCHDACKSYDQWITRKKKQWD-VLSTKFSSV 245
Query: 195 VEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKE 231
+ + ++ ++ KE + + K
Sbjct: 246 KKTQKIGTENIATAYDILKQELNGFKEATFENEINKR 282
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 268
Score = 30.4 bits (68), Expect = 0.43
Identities = 14/86 (16%), Positives = 34/86 (39%), Gaps = 6/86 (6%)
Query: 115 SEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKK------DKDKIKNKEKDKEKKVDKE 168
+E L +K + + K ++ I + D +K +E +++ ++K
Sbjct: 172 TEPLKALKTRIAEEGSKAVFSPLIEKLILNNSHRVTIEMQPDPEKATQEEVEEKNILEKV 231
Query: 169 KEKGKKEEKEKKEEKEFKMKEDKEKP 194
K +E+ + ++K +E P
Sbjct: 232 KAAMTEEDLAELARATEELKLKQETP 257
Score = 26.1 bits (57), Expect = 8.1
Identities = 16/100 (16%), Positives = 40/100 (40%)
Query: 121 IKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKK 180
+ K + K + +E K + I N ++ + EK +EE E+K
Sbjct: 166 FEPLKYTEPLKALKTRIAEEGSKAVFSPLIEKLILNNSHRVTIEMQPDPEKATQEEVEEK 225
Query: 181 EEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKK 220
E E+ + ++ + ++ + ++++ D + L+
Sbjct: 226 NILEKVKAAMTEEDLAELARATEELKLKQETPDPPEALRC 265
>d1je5a_ b.40.4.7 (A:) gp2.5 {Bacteriophage T7 [TaxId: 10760]}
Length = 197
Score = 29.2 bits (65), Expect = 0.68
Identities = 12/99 (12%), Positives = 27/99 (27%), Gaps = 4/99 (4%)
Query: 144 KKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEK 203
KD + + + K E+ E+ + K+ + + P +
Sbjct: 45 PNKDPRCQRMVDEIVKCHEEAYAAAVEEYEANPPAVARGKKPLKPYEGDMP----FFDNG 100
Query: 204 DSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKEVIPK 242
D K K K+ + K + + +
Sbjct: 101 DGTTTFKFKCYASFQDKKTKETKHINLVVVDSKGKKMED 139
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 84
Score = 27.4 bits (61), Expect = 0.84
Identities = 15/47 (31%), Positives = 28/47 (59%)
Query: 138 EKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKE 184
E EK++ K + +DK KI +K + +DK + K+E + +++E E
Sbjct: 18 EDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELE 64
Score = 24.7 bits (54), Expect = 8.2
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 146 KDKKDKDKIKNKEKDK-EKKVDKEKEKGKKEEKEKKEEKEFKMKE 189
+D+K + KI +++K K K ++ K + +KEE E + KE
Sbjct: 18 EDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKE 62
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4
{Human (Homo sapiens) [TaxId: 9606]}
Length = 279
Score = 29.0 bits (64), Expect = 1.1
Identities = 18/139 (12%), Positives = 51/139 (36%), Gaps = 12/139 (8%)
Query: 120 EIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEK 179
++ K ++ K+ K +E + ++ ++ K K K ++ +E EK + +
Sbjct: 90 CLELTKYSQEMKQERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAEKAAQTAERL 149
Query: 180 KEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKE-KLKKKKKEKERSSHEKE 238
++ EK ++ ++ K E + ++ ++++
Sbjct: 150 DQDINATKA-----------DVEKAKQQAHLRSHMAEESKNEYAAQLQRFNRDQAHFYFS 198
Query: 239 VIPKLTFKFGTDMEEKTKR 257
+P++ K E + R
Sbjct: 199 QMPQIFDKLQDMDERRATR 217
>d1ge9a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Aquifex
aeolicus [TaxId: 63363]}
Length = 184
Score = 28.4 bits (63), Expect = 1.2
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 115 SEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKD 160
E I++ + I +D+K + +K+ K + ++ KEK+
Sbjct: 135 REAKEMIEELEGISEDEKKRALERLQKLTDKYIDEINKLMEAKEKE 180
>d1weqa_ g.50.1.2 (A:) PHD finger protein 7 (NYD-SP6) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 85
Score = 26.8 bits (59), Expect = 1.4
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Query: 298 VQDDGSLPMIGCDGCDAW-YHWVCVGLVAEPETSDWFCPKCSKVDEGS 344
+D+G +I C C + H C L + W C +C S
Sbjct: 38 FEDEGRWRLILCATCGSHGTHRDCSSLRPNSK--KWECNECLPASGPS 83
>d2i71a1 e.72.1.1 (A:1-377) Hypothetical protein SSO1389 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 377
Score = 28.7 bits (64), Expect = 1.4
Identities = 16/96 (16%), Positives = 36/96 (37%), Gaps = 5/96 (5%)
Query: 77 EKMSSKEKTSPKEKEYSKVKDVELGVTP---MVPNIVKVTSSEDLGEIKK--DKSIKKDK 131
E SK+ + V ++ + I + + + DL ++ + K
Sbjct: 244 EDDLSKDPLLTPSENEINVVYKDMKYALSHALFYVISRFSGNVDLDTLRHYAETYADKVT 303
Query: 132 KTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDK 167
+ + E +KI+K + ++ + K + K DK
Sbjct: 304 RAIIENEVDKIEKYQMGSERKLLGEYMKVEGKGFDK 339
>d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II,
PAC) {Streptococcus mutans [TaxId: 1309]}
Length = 377
Score = 28.5 bits (63), Expect = 1.9
Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 10/88 (11%)
Query: 122 KKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKN----KEKDKEKKVDKEK------EK 171
+KD + K + E+ IK + +K K ++ + + D E
Sbjct: 1 QKDLADYPVKLKAYEDEQASIKAALAELEKHKNEDGNLTEPSAQNLVYDLEPNANLSLTT 60
Query: 172 GKKEEKEKKEEKEFKMKEDKEKPVEKIR 199
K K + F K K V+KI
Sbjct: 61 DGKFLKASAVDDAFSKSTSKAKYVQKIL 88
Score = 27.3 bits (60), Expect = 3.8
Identities = 14/123 (11%), Positives = 33/123 (26%)
Query: 151 KDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKK 210
KD K K + ++ K E EK + ++ + E + + + +
Sbjct: 2 KDLADYPVKLKAYEDEQASIKAALAELEKHKNEDGNLTEPSAQNLVYDLEPNANLSLTTD 61
Query: 211 SKDKDKKLKKEKLKKKKKEKERSSHEKEVIPKLTFKFGTDMEEKTKRESSPKIVIKPVKS 270
K + K + + ++ + + E K S
Sbjct: 62 GKFLKASAVDDAFSKSTSKAKYVQKILQLDDLDITNLEQSNDVASSMELYGNFGDKAGWS 121
Query: 271 PSP 273
+
Sbjct: 122 TTV 124
>d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 327
Score = 28.1 bits (62), Expect = 2.5
Identities = 19/129 (14%), Positives = 41/129 (31%), Gaps = 6/129 (4%)
Query: 129 KDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMK 188
+ ++ + + + K K + + V E E + E++ + + + K K
Sbjct: 125 TSLPSPEQLKGKILLKGKKLGGLLPAGGENGSEATDVSDEVEAAEMEDEAVRSQVQHKPK 184
Query: 189 EDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKEVIPKLTFKFG 248
EDK K V ++ S+ K + E +S + +L + G
Sbjct: 185 EDKLKLVPEL------SDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESG 238
Query: 249 TDMEEKTKR 257
Sbjct: 239 NGFVRHNVS 247
>d2py5a2 e.8.1.1 (A:188-575) phi29 DNA polymerase {Bacteriophage
phi-29 [TaxId: 10756]}
Length = 388
Score = 27.5 bits (60), Expect = 3.5
Identities = 17/104 (16%), Positives = 26/104 (25%), Gaps = 1/104 (0%)
Query: 133 THKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKE 192
T K D K E + K +K + KE K +
Sbjct: 270 TDSIHLTGTEIPDVIKDIVDPKKLGYWAHESTFKRAKYLRQKTYIQDIYMKEVDGKLVEG 329
Query: 193 KPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHE 236
P + + K K K++ E K K +
Sbjct: 330 SPDDYTDIKFSVKCAGMTDKIK-KEVTFENFKVGFSRKMKPKPV 372
>d1is1a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 185
Score = 26.8 bits (59), Expect = 4.0
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 116 EDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKD 160
DL + KDK I +D+ ++E +K+ KK + + KEK+
Sbjct: 137 NDLKALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEVLAAKEKE 181
>d2g39a2 c.124.1.2 (A:224-497) Acetyl-CoA hydrolase (PA5445)
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 274
Score = 27.2 bits (60), Expect = 4.0
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 27 PSVAGPGLIPRLPPMLQHPLIPQPLVH 53
S+A G I + PM+ H + V
Sbjct: 175 KSIAKGGNISSVVPMVSHVDHTEHDVD 201
>d1l8wa_ a.154.1.1 (A:) Variable surface antigen VlsE {Lyme disease
spirochete (Borrelia burgdorferi) [TaxId: 139]}
Length = 291
Score = 27.1 bits (60), Expect = 4.3
Identities = 16/68 (23%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Query: 145 KKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKD 204
K D K K +K K++K K KEK + K D V +
Sbjct: 11 KSDPK-KSDVKTYFTTVAAKLEKTKTDLNSLPKEKSDISSTTGKPDSTGSVGTAVEGAIK 69
Query: 205 SEKEKKSK 212
E K
Sbjct: 70 EVSELLDK 77
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus
thermophilus, strain hb27 [TaxId: 274]}
Length = 110
Score = 26.0 bits (57), Expect = 4.5
Identities = 11/83 (13%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 139 KEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVEKI 198
I++K D + + +++ +++ K ++ + E + + E+KE + +
Sbjct: 15 HRAIREKGVALDLEALLALDREV-QELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARG 73
Query: 199 RKEEKD-SEKEKKSKDKDKKLKK 220
+ ++ E+ ++K+ +L+
Sbjct: 74 KALGEEAKRLEEALREKEARLEA 96
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain
{Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8
[TaxId: 37296]}
Length = 60
Score = 24.8 bits (53), Expect = 4.5
Identities = 10/53 (18%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Query: 286 DSKQVWICPAC-GVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKC 337
+ + V +C C + GC G H C+ + + C C
Sbjct: 2 EDEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLT-ISRNTACQIC 53
>d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M
protein {Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 425
Score = 27.2 bits (59), Expect = 4.5
Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Query: 135 KKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKP 194
K + ++I + D K + +D E + + ++ P
Sbjct: 347 KGQPTKEIWFYDYRTDIKHTLATNKLERHHLDDFVSC-YNNRVEIYDAENNPQGRWRKYP 405
Query: 195 VEKIRKEEKDS 205
V++I +K S
Sbjct: 406 VDEIIARDKTS 416
>d1wqga1 d.67.3.1 (A:2-184) Ribosome recycling factor, RRF
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 183
Score = 26.8 bits (59), Expect = 4.5
Identities = 10/45 (22%), Positives = 24/45 (53%)
Query: 116 EDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKD 160
E+L I+K+ +D+ +K+ +K + + + +K+KE +
Sbjct: 136 EELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGE 180
>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 248
Score = 26.9 bits (59), Expect = 4.6
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 3/67 (4%)
Query: 168 EKEKGKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKK 227
E + KK + E + K D ++K + E K K+ + +K ++L+
Sbjct: 110 ELDSRYLSAALKKYQTEQRSKGDA---LDKCQAELKKLRKKSQGSKNPQKYSDKELQYID 166
Query: 228 KEKERSS 234
+
Sbjct: 167 AISNKQG 173
Score = 26.5 bits (58), Expect = 6.4
Identities = 11/74 (14%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 187 MKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKEVIPKLTFK 246
+++ E + K + E++SK + +LKK +K+ + S + ++ K
Sbjct: 105 LEQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKEL-- 162
Query: 247 FGTDMEEKTKRESS 260
++ + ++
Sbjct: 163 --QYIDAISNKQGE 174
>d2j01t1 b.34.5.6 (T:1-138) Ribosomal protein L19 {Thermus
thermophilus [TaxId: 274]}
Length = 138
Score = 26.1 bits (57), Expect = 4.9
Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 132 KTHKKKEKEKIKKKKDKKDKD-KIKNKEKDKEKKVDKEKEKGKKEEKEK 179
+ + K+ ++ D++ + K + K D+ E+ KEE +K
Sbjct: 89 VQRGRARRAKLYFIRNLSDREIRRKLRADRKRIDQDRAAERAAKEEAQK 137
>d1ek8a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Escherichia
coli [TaxId: 562]}
Length = 185
Score = 26.5 bits (58), Expect = 5.2
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 116 EDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKD 160
+ + + KDK I +D + + +K+ KK + + +KE +
Sbjct: 137 DKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAE 181
>d1zgha2 c.65.1.1 (A:1-164) Methionyl-tRNAfmet formyltransferase
{Clostridium thermocellum [TaxId: 1515]}
Length = 164
Score = 26.6 bits (58), Expect = 5.2
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 127 IKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKVDKEK 169
I K + K ++ K+ + K + I NK++ +KV
Sbjct: 5 IATTKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
>d2o02a1 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) [TaxId:
9913]}
Length = 230
Score = 26.4 bits (58), Expect = 5.9
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 205 SEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKEVIPKL 243
S E+K++ +KK + + ++K E E +V+ L
Sbjct: 63 SSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLL 101
>d1rh1a1 b.110.1.1 (A:10-312) Colicin B N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 303
Score = 26.5 bits (58), Expect = 6.4
Identities = 8/54 (14%), Positives = 14/54 (25%), Gaps = 2/54 (3%)
Query: 20 PFQFSPFPSVAGPGL--IPRLPPMLQHPLIPQPLVHPPGTPPPSKMKDKVSPKD 71
P P + P P + L + P + P + +S
Sbjct: 190 PVPDRSRPGTNIKDVYSAPVSPNLPDLVLSVGQMNTPVRSNPEIQEDGVISETG 243
>d1h6qa_ b.88.1.2 (A:) Translationally controlled tumor protein TCTP
(histamine-releasing factor) {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 168
Score = 26.2 bits (58), Expect = 6.6
Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 3/71 (4%)
Query: 97 DVELGVTPMVPNIVKVTSSEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKN 156
D E + + S L DK K ++ K + IK + + + +++
Sbjct: 53 DAEENAEEGTETVNNLVYSFRLSPTSFDK---KSYMSYIKGYMKAIKARLQESNPERVPV 109
Query: 157 KEKDKEKKVDK 167
EK+ V K
Sbjct: 110 FEKNAIGFVKK 120
>d1eh1a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Thermus
thermophilus [TaxId: 274]}
Length = 185
Score = 26.1 bits (57), Expect = 7.1
Identities = 11/62 (17%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 124 DKSIKKDKKTHKKKEKEKIKK-KKDKKDKDKIKNKEKDKEKKVDKEKEKGKKEEKEKKEE 182
+ ++ + + +E + K KK K+ +++ K E ++ K ++ + + E+
Sbjct: 119 RQYAEEGRVAIRNIRREALDKLKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLAEK 178
Query: 183 KE 184
KE
Sbjct: 179 KE 180
Score = 26.1 bits (57), Expect = 8.0
Identities = 9/45 (20%), Positives = 22/45 (48%)
Query: 116 EDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKD 160
+ L ++ K+ + +D+ + E +KI + K + KE++
Sbjct: 138 DKLKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLAEKKEQE 182
>d1yz1a1 b.88.1.2 (A:1-172) Translationally controlled tumor protein
TCTP (histamine-releasing factor) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 172
Score = 25.8 bits (57), Expect = 7.4
Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 101 GVTPMVPNIVKVTSSEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKD 160
G V V + + L E K + K + K + IK K +++ +++K
Sbjct: 61 GTESTVITGVDIVMNHHLQETSFTK---EAYKKYIKDYMKSIKGKLEEQRPERVKPFMTG 117
Query: 161 KEKKVDK 167
+++
Sbjct: 118 AAEQIKH 124
>d1dd5a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Thermotoga
maritima [TaxId: 2336]}
Length = 184
Score = 26.1 bits (57), Expect = 7.5
Identities = 8/45 (17%), Positives = 23/45 (51%)
Query: 116 EDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKD 160
+ + E +K+ I +D + E +K+ + +K + + K+++
Sbjct: 136 KKIKEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVFEIKKEE 180
>d1nu9c2 a.8.6.1 (C:146-281) Staphylocoagulase {Staphylococcus
aureus [TaxId: 1280]}
Length = 136
Score = 25.6 bits (56), Expect = 8.3
Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 2/82 (2%)
Query: 152 DKIKNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKS 211
D + E + ++ EK ++ E E +F ++ KP + I + K
Sbjct: 48 DLVLGDEDKPHRISNERIEKEMIKDLESIIE-DFFIETGLNKP-DNITSYDSSKHHYKNH 105
Query: 212 KDKDKKLKKEKLKKKKKEKERS 233
+ + L KE + +
Sbjct: 106 SEGFEALVKETREAVTNANDSW 127
>d1qcza_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole
carboxylase, PurE) {Escherichia coli [TaxId: 562]}
Length = 163
Score = 25.7 bits (56), Expect = 9.2
Identities = 4/27 (14%), Positives = 13/27 (48%)
Query: 123 KDKSIKKDKKTHKKKEKEKIKKKKDKK 149
DK + + +K + +++ + D +
Sbjct: 134 HDKELHQRLNDWRKAQTDEVLENPDPR 160
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 584
Score = 26.3 bits (57), Expect = 9.7
Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 155 KNKEKDKEKKVDKEKEKGKKEEKEKKEEKEFKMKE 189
K+KE + K+++KE + + K K + K+
Sbjct: 16 KSKE-AEIKRINKELANIRSKFKGDKALDGYSKKK 49
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.309 0.129 0.374
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,630,055
Number of extensions: 85418
Number of successful extensions: 1128
Number of sequences better than 10.0: 1
Number of HSP's gapped: 818
Number of HSP's successfully gapped: 270
Length of query: 444
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 356
Effective length of database: 1,199,356
Effective search space: 426970736
Effective search space used: 426970736
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 54 (25.3 bits)