RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5827
(410 letters)
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 64
Score = 63.1 bits (153), Expect = 1e-13
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 251 GDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE--PETSDWFCPKCSK 305
G S C ACG I CD C+ W+H CV + + CP CS
Sbjct: 1 GSSGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSN 57
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 79
Score = 57.4 bits (138), Expect = 2e-11
Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Query: 256 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE--PETSDWFCPKCSKVDEGSRKE 313
V + C + + MI C C W+H CVG+ E + + CP C + G
Sbjct: 11 VPVYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDC-EAVFGPSIM 69
Query: 314 KKKRGRKKK 322
K
Sbjct: 70 KNWHSGPSS 78
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 72
Score = 55.4 bits (133), Expect = 9e-11
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 262 CGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP-ETSDWFCPKCSK 305
CG +DD M+ CDGC W+H C+G+ S + C +C +
Sbjct: 21 CGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIE 65
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1,
Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 76
Score = 54.7 bits (131), Expect = 2e-10
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Query: 262 CGVQDDGSLPMIGCDGCDAWYHWVCVGL------VAEPETSDWFCPKCS 304
C + MI CD C+ W+H CVG+ + E D+ CP C+
Sbjct: 21 CRQPHNNR-FMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCT 68
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription
factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 48.4 bits (115), Expect = 1e-08
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 259 CPACGVQDDGSLPMIGCDGCDAWYHWVCVGL-VAEPETSDWFCPKC 303
C C + + +I CD C+ +H C+ + E +W CP C
Sbjct: 3 CKVCRKKGEDD-KLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 47
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId:
9606]}
Length = 61
Score = 46.5 bits (110), Expect = 9e-08
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Query: 251 GDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL-VAEPETSDWFCPKCS 304
G + C C + ++ CD C + YH C+ + E +W CP+C+
Sbjct: 4 GSDHHMEFCRVCKDGGE----LLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 54
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 78
Score = 46.7 bits (110), Expect = 1e-07
Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 6/62 (9%)
Query: 249 DTGDSKQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEP------ETSDWFCPK 302
D + C + S+ C W H CV L +P ++C
Sbjct: 9 DPFQPEIKVRCVCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEI 68
Query: 303 CS 304
C
Sbjct: 69 CR 70
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 70
Score = 45.4 bits (107), Expect = 3e-07
Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 258 ICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL-VAEPETSDWFCPKCSKVDEGSRKEKKK 316
IC C D ++ C+ C+ +H C + + +W C C + + ++
Sbjct: 9 ICRVCQKPGD----LVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPDLKEEDVDL 64
Query: 317 RGRK 320
+ K
Sbjct: 65 QACK 68
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4
{Homo sapiens [TaxId: 9606]}
Length = 51
Score = 44.1 bits (104), Expect = 4e-07
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 262 CGVQDDGSLPMI-GCDGCDAWYHWVCVGLVAEPETSDWFCPKCSK 305
C G + D W+H+ CVGL +P WFCP+CS+
Sbjct: 7 CHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPR-GKWFCPRCSQ 50
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 88
Score = 44.8 bits (105), Expect = 8e-07
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 259 CPACG-VQDDGSLPMIGCDGCDAWYHWVCVG-----LVAEPETSDWFCPKCSKVDEGSRK 312
C C + ++ C C YH C W+C +C++ + +
Sbjct: 19 CVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKRMAQ 78
Query: 313 EKKKRG 318
+ +K G
Sbjct: 79 KNQKSG 84
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 71
Score = 43.0 bits (101), Expect = 2e-06
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 262 CGVQDDGSLPMIGCDGCD-AWYHWVCVGLVAEPETSDWFCPKC 303
C G + + C W+H+ CV L +P+ W+CPKC
Sbjct: 21 CNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPK-GKWYCPKC 62
>d1twfa_ e.29.1.2 (A:) RBP1 {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 1449
Score = 38.7 bits (89), Expect = 0.001
Identities = 28/172 (16%), Positives = 60/172 (34%), Gaps = 3/172 (1%)
Query: 20 PSKMKDKVSPKDKTSPKEKMSSKEKTSPKEKEYSKVKDVELGVTPMVPNIVKVTSSEDLG 79
+ + K T E + S E ++ + + S L
Sbjct: 1133 IRSAIEHTTLKSVTIASEIYYDPDPRSTVIPEDEEIIQLHFSLLDEEAEQSFDQQSPWLL 1192
Query: 80 EIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKE--KEKGKKEEK 137
++ D++ DK + E+I K+ K D I +++ D++ I + K E
Sbjct: 1193 RLELDRAAMNDKDLTMGQVGERI-KQTFKNDLFVIWSEDNDEKLIIRCRVVRPKSLDAET 1251
Query: 138 EKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKL 189
E +E+ K+ + ++ + VE I + K + +K+ +
Sbjct: 1252 EAEEDHMLKKIENTMLENITLRGVENIERVVMMKYDRKVPSPTGEYVKEPEW 1303
Score = 31.7 bits (71), Expect = 0.19
Identities = 12/126 (9%), Positives = 35/126 (27%), Gaps = 5/126 (3%)
Query: 87 IKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEK--EKKEEKE 144
+ + + ++ K KK+ K K + ++ +
Sbjct: 114 LDEHNELMRQALAIKDSKKRFAAIWTLCKTKMVCETDVPSEDDPTQLVSRGGCGNTQPTI 173
Query: 145 KKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEK- 203
+K+ + K++ + E ++ + K + + + S E
Sbjct: 174 RKDGLKLVGSWKKDRATGDADEPELRVLSTEEILNIFKHISVKDFTSLGFNEVFSRPEWM 233
Query: 204 --EVIP 207
+P
Sbjct: 234 ILTCLP 239
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding
protein 1 (GBP1), C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 300
Score = 35.5 bits (81), Expect = 0.008
Identities = 19/115 (16%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 80 EIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEK 139
E D ++ D+ +K+++ ++++ K + + K + + K ++K + ++
Sbjct: 186 ESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHL 245
Query: 140 KEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKK 194
K+ EK E ++ +++E+ + +E++ KE + + + +K E + K
Sbjct: 246 KQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGF-QKESRIMKNEIQDLQTK 299
Score = 33.9 bits (77), Expect = 0.025
Identities = 21/128 (16%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Query: 82 KKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEKKE 141
K ++ + + K KE + + + + + + + K + + K + +++
Sbjct: 170 KGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRK 229
Query: 142 EKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSH 201
++ E+KE +E ++ EK+ + KE++ + KL++++ K+ ++ S
Sbjct: 230 NEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQE-RTLALKLQEQEQLLKEGFQKESRI 288
Query: 202 EKEVIPKL 209
K I L
Sbjct: 289 MKNEIQDL 296
Score = 30.9 bits (69), Expect = 0.28
Identities = 12/112 (10%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 76 EDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKE 135
+ + + + + K+ + ++ + E + + + KN++ ++K+ ++ +
Sbjct: 190 DAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLT 249
Query: 136 EKEKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKE 187
EK + + + +E+E + ++ ++ +E ++ + K++ + L+ +
Sbjct: 250 EKMENDRVQLLKEQERTLALKLQE--QEQLLKEGFQKESRIMKNEIQDLQTK 299
Score = 30.1 bits (67), Expect = 0.45
Identities = 14/118 (11%), Positives = 49/118 (41%)
Query: 81 IKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEKK 140
+K +S+ + EK K+ + ++ K + ++ ++ E+ ++++
Sbjct: 182 LKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSY 241
Query: 141 EEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKER 198
+E K+ ++ + + ++ K E+E+ K+ +K + + + + +
Sbjct: 242 QEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTK 299
Score = 28.9 bits (64), Expect = 0.91
Identities = 16/104 (15%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 71 KVTSSEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKE 130
+T E E+++ K+ E ++ ++ ++ + + K +K++ ++
Sbjct: 198 TLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRV 257
Query: 131 KGKKEEKEKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKE 174
+ KE++ K +++E+ K KE ++ E +D + +
Sbjct: 258 QLLKEQERTLALKLQEQEQLLKEGFQKES--RIMKNEIQDLQTK 299
>d1oisa_ e.15.1.1 (A:) Eukaryotic DNA topoisomerase I, N-terminal
DNA-binding fragment {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 223
Score = 33.5 bits (77), Expect = 0.031
Identities = 13/56 (23%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 91 KKTHKKKEKEKIKKKKDKKDKDKIKN---KEKDKEKKIDKEKEKGKKEEKEKKEEK 143
K++ +IK+ + D K+ + +K+++K++ +++K + E+EK EE
Sbjct: 75 KESGGPLNGIEIKEF-SRCDFTKMFDYFQLQKEQKKQLTSQEKKQIRLEREKFEED 129
Score = 30.4 bits (69), Expect = 0.31
Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Query: 99 KEKIKKKKDKKDKDKIKNKEKDKEKKI----DKEKEKGKKEEK-EKKEEKEKKEEKEFKM 153
+ +K+ + +IK + K+ +KE+ K+ EKK+ + ++E+ E
Sbjct: 71 LQVLKESGGPLNGIEIKEFSRCDFTKMFDYFQLQKEQKKQLTSQEKKQIRLEREKFEEDY 130
Query: 154 K 154
K
Sbjct: 131 K 131
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse
gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 248
Score = 33.2 bits (75), Expect = 0.041
Identities = 14/121 (11%), Positives = 44/121 (36%), Gaps = 8/121 (6%)
Query: 80 EIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEK 139
+ + + + + H + +E +KK K+ ++ E + + +
Sbjct: 128 NVDEIERLLPAVERHIDEVREILKKVMGKERPQAKDVVVREGEVIFPDLRTYIQGSGRTS 187
Query: 140 KEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKD------KKLKK--EKLKK 191
+ + + ED + + + K + E KS D+ ++L + ++ ++
Sbjct: 188 RLFAGGLTKGASFLLEDDSELLSAFIERAKLYDIEFKSIDEVDFEKLSRELDESRDRYRR 247
Query: 192 K 192
+
Sbjct: 248 R 248
Score = 29.7 bits (66), Expect = 0.53
Identities = 10/107 (9%), Positives = 34/107 (31%), Gaps = 5/107 (4%)
Query: 62 VTPMVPNIVKVTSSEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDK 121
V ++ ++ + + ++ + + + + +D
Sbjct: 146 VREILKKVMGKERPQAKDVVVREGEVIFPDLRTYIQGSGRTSRLFAGGLTKGASFLLEDD 205
Query: 122 EKKIDKEKEKGKKEEKEKKEEKEKK-EEKEFKMKEDKEKPVEKIRKE 167
+ + E+ K + E K E E+ ++ E ++ + R+
Sbjct: 206 SELLSAFIERAKLYDIEFKSIDEVDFEKLSRELDESRD----RYRRR 248
>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding
protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}
Length = 321
Score = 33.1 bits (74), Expect = 0.047
Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Query: 92 KTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKG-----KKEEKEKKEEKEKK 146
+ + +KK + ++ + K K D+++ + ++E+K K E ++K
Sbjct: 4 SQELTQREANVKKVHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQK 63
Query: 147 EEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKEVI 206
+ EF +E E+ E R + ++ S KD + + + K S E I
Sbjct: 64 VQNEFDARERAEREREAARGDAAAEKQRLASLLKDLEDDASGYNRLRPSKPMLSEEDTNI 123
Query: 207 PKLTFK 212
+ F
Sbjct: 124 LRQLFL 129
>d1k4ta3 e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase I,
N-terminal DNA-binding fragment {Human (Homo sapiens)
[TaxId: 9606]}
Length = 230
Score = 32.8 bits (75), Expect = 0.056
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 91 KKTHKKKEKEKIK--KKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEKKEEK 143
+K +EK I K D + + + K++ KE++ KEE EK ++
Sbjct: 83 RKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 29.7 bits (67), Expect = 0.57
Identities = 11/50 (22%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 103 KKKKDKKDKDKIKNKEKDKEKKIDK--EKEKGKKEEKEKKEEKEKKEEKE 150
+K+ ++K+ I N K ++ + + + +++ K+E+ + KEE E
Sbjct: 83 RKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENE 132
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 332
Score = 33.0 bits (75), Expect = 0.060
Identities = 26/129 (20%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 74 SSEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDK--DKIKNKEKDKEKKIDKEKEK 131
S ++K K + +++ + D+KDK +K+ + KD +++ +K +
Sbjct: 203 SRVSAENLQKSLDQMKKQIADVERDVQNFPAATDEKDKFVEKMTSFVKDAQEQYNKLRMM 262
Query: 132 GKKEEKEKKEEKEK--KEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKL 189
E KE + + K+ ++E + ++ +K ++ ++K+++ KL
Sbjct: 263 HSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETEEKMRRAKL 322
Query: 190 KKKKKEKER 198
K+K EKER
Sbjct: 323 AKEKAEKER 331
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment
(residues 410-1202) {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 760
Score = 32.9 bits (74), Expect = 0.071
Identities = 18/106 (16%), Positives = 40/106 (37%), Gaps = 9/106 (8%)
Query: 100 EKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEKKEEKEKKEEKEFKMKEDKEK 159
+++ ++ I+ E + +KE + ++ E+ + +ED+E
Sbjct: 618 KELTVTNKPRN-AIIQELENLGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEES 676
Query: 160 PVEKIRKEEKDSEKEKKSKD--------KDKKLKKEKLKKKKKEKE 197
E E+ + + K + +KL K+K+EKE
Sbjct: 677 SHEDTENVINGPEELYGTYEYLLGMRIWSLTKERYQKLLKQKQEKE 722
Score = 29.4 bits (65), Expect = 1.0
Identities = 15/135 (11%), Positives = 43/135 (31%), Gaps = 19/135 (14%)
Query: 68 NIVKVTSSEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDK 127
+ + + E++ + +K+ + + D + E+D+E +
Sbjct: 621 TVTNKPRNAIIQELENLGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHED 680
Query: 128 EKEKGKKEEKEK---------------KEEKEK----KEEKEFKMKEDKEKPVEKIRKEE 168
+ E+ KE +K K+EKE +++ + + I +
Sbjct: 681 TENVINGPEELYGTYEYLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTD 740
Query: 169 KDSEKEKKSKDKDKK 183
+ + + +
Sbjct: 741 LKAFEVGYQEFLQRD 755
>d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 138
Score = 31.4 bits (71), Expect = 0.091
Identities = 20/118 (16%), Positives = 52/118 (44%)
Query: 78 LGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEK 137
L D + + ++++ + +K + ++ + ++ + K EK + ++E
Sbjct: 21 LKPPSFDGVPEFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVI 80
Query: 138 EKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKE 195
+K E+ K K K ++ K +E + ++ ++KDK ++ + K+ KE
Sbjct: 81 QKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKE 138
Score = 27.9 bits (62), Expect = 1.0
Identities = 20/92 (21%), Positives = 47/92 (51%)
Query: 77 DLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEE 136
L EI+K ++++ +++ E K +K + +++ I+ ++ I KEK ++
Sbjct: 43 SLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKM 102
Query: 137 KEKKEEKEKKEEKEFKMKEDKEKPVEKIRKEE 168
+ KE +E + ++K+K E++RK +
Sbjct: 103 ESNKENREAHLAAMLERLQEKDKHAEEVRKNK 134
Score = 27.5 bits (61), Expect = 1.7
Identities = 15/82 (18%), Positives = 41/82 (50%)
Query: 117 KEKDKEKKIDKEKEKGKKEEKEKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKK 176
+E K+ + +E+ K ++ E K ++++ E+E K +E +EK ++K +
Sbjct: 45 EEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMES 104
Query: 177 SKDKDKKLKKEKLKKKKKEKER 198
+K+ + L++ +++ +
Sbjct: 105 NKENREAHLAAMLERLQEKDKH 126
Score = 27.2 bits (60), Expect = 1.9
Identities = 15/108 (13%), Positives = 51/108 (47%)
Query: 97 KEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEKKEEKEKKEEKEFKMKED 156
+ + +++D ++ K E +E++ +E E K ++++ E+E ++ +
Sbjct: 31 EFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNF 90
Query: 157 KEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKE 204
+ EK+ ++ + +++ +++ + ++ K +E ++ KE
Sbjct: 91 IKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKE 138
>d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II,
PAC) {Streptococcus mutans [TaxId: 1309]}
Length = 377
Score = 30.8 bits (69), Expect = 0.27
Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 4/88 (4%)
Query: 82 KKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKN----KEKDKEKKIDKEKEKGKKEEK 137
+KD + K + E+ IK + +K K ++ + + D E
Sbjct: 1 QKDLADYPVKLKAYEDEQASIKAALAELEKHKNEDGNLTEPSAQNLVYDLEPNANLSLTT 60
Query: 138 EKKEEKEKKEEKEFKMKEDKEKPVEKIR 165
+ K K + F K K V+KI
Sbjct: 61 DGKFLKASAVDDAFSKSTSKAKYVQKIL 88
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 268
Score = 30.4 bits (68), Expect = 0.33
Identities = 12/90 (13%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 75 SEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKK------DKDKIKNKEKDKEKKIDKE 128
+E L +K + + K ++ I + D +K +E +++ ++K
Sbjct: 172 TEPLKALKTRIAEEGSKAVFSPLIEKLILNNSHRVTIEMQPDPEKATQEEVEEKNILEKV 231
Query: 129 KEKGKKEEKEKKEEKEKKEEKEFKMKEDKE 158
K +E+ + ++ + + + + E
Sbjct: 232 KAAMTEEDLAELARATEELKLKQETPDPPE 261
Score = 27.7 bits (61), Expect = 2.3
Identities = 10/54 (18%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 133 KKEEKEKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKK 186
+K +E+ EEK E+ + M E+ + ++ + ++ + ++++ D + L+
Sbjct: 215 EKATQEEVEEKNILEKVKAAMTEED---LAELARATEELKLKQETPDPPEALRC 265
>d1rqga1 a.27.1.1 (A:397-606) Methionyl-tRNA synthetase (MetRS)
{Pyrococcus abyssi [TaxId: 29292]}
Length = 210
Score = 30.2 bits (67), Expect = 0.36
Identities = 10/80 (12%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Query: 73 TSSEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKG 132
+ E+ ++K + KK ++I + K ++E
Sbjct: 128 VKRWEFRELPAGHKVRKPEILFKKVTDDQIIYFILNYMAKGNPEGARILLDK-YYKREDV 186
Query: 133 KKEEKEKKEEKEKKEEKEFK 152
+ KEK ++ + +
Sbjct: 187 IRVAKEKFGDEAEVVLRRVY 206
>d1zroa1 a.264.1.1 (A:8-282) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 275
Score = 30.4 bits (68), Expect = 0.37
Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 3/93 (3%)
Query: 94 HKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEKKEEKEKKEEKEFKM 153
+ + K K + KE ++ K E K+ E +
Sbjct: 183 ERDNRAKLPKSKCKNNALYEACEKECIDPCMKYRDWIIRSKFEWHT---LSKEYETQKVP 239
Query: 154 KEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKK 186
KE+ E + KI + + D++ + D + K
Sbjct: 240 KENAENYLIKISENKNDAKVSLLLNNCDAEYSK 272
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 84
Score = 27.8 bits (62), Expect = 0.61
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 98 EKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEKKEEKEKK 146
E EK++ K + +DK KI +K + +DK + K+E + +++E EK
Sbjct: 18 EDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKV 66
>d1zroa2 a.264.1.1 (A:283-596) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 314
Score = 29.6 bits (66), Expect = 0.64
Identities = 20/98 (20%), Positives = 37/98 (37%)
Query: 95 KKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEKKEEKEKKEEKEFKMK 154
K K E +K + +K + K K K K+K + ++ K+ ++ +K
Sbjct: 215 KTKMIETLKVECKEKPCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYKMYS 274
Query: 155 EDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKK 192
E K E K+ + +D+ K+ K K
Sbjct: 275 EFKSIKPEVYLKKYSEKCSNLNFEDEFKEELHSDYKNK 312
Score = 28.9 bits (64), Expect = 1.0
Identities = 14/93 (15%), Positives = 40/93 (43%)
Query: 78 LGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEK 137
+ +K + K + + K++ K+ KK ++ K ++ +E + + + +
Sbjct: 219 IETLKVECKEKPCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYKMYSEFKS 278
Query: 138 EKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKD 170
K E KK ++ +++ E++ + K+
Sbjct: 279 IKPEVYLKKYSEKCSNLNFEDEFKEELHSDYKN 311
Score = 26.6 bits (58), Expect = 6.7
Identities = 17/97 (17%), Positives = 37/97 (38%)
Query: 117 KEKDKEKKIDKEKEKGKKEEKEKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKK 176
++K K + K + K K E + + K ++ K+++ K +E + K
Sbjct: 213 QDKTKMIETLKVECKEKPCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYKM 272
Query: 177 SKDKDKKLKKEKLKKKKKEKERSSHEKEVIPKLTFKF 213
+ + LKK ++ + E E +L +
Sbjct: 273 YSEFKSIKPEVYLKKYSEKCSNLNFEDEFKEELHSDY 309
>d1zhxa1 d.338.1.1 (A:2-434) Oxysterol-binding protein homolog 4,
KES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 433
Score = 28.9 bits (64), Expect = 1.1
Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 15/118 (12%)
Query: 121 KEKKIDK-EKEKGKKEEKEKKEEKEKKEEKE------FKMKEDKEKPVEKIRKEEKDSEK 173
K + K K + EE +++ KE++ + FK + P E EKD
Sbjct: 324 KLGDFNLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDYSVTPEEGALVPEKDDTF 383
Query: 174 EKKSKDKDKKLKKEKLKKKKKEKERSSHEKEVIPKLTFKFGTDMEEKTKRESSPKIVI 231
K + + K +KE KE + + ++F ++ + +IV+
Sbjct: 384 LKLASALNLSTKNAPSGTLVGDKED---RKEDLSSIHWRF-----QRELWDEEKEIVL 433
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4
{Human (Homo sapiens) [TaxId: 9606]}
Length = 279
Score = 28.7 bits (63), Expect = 1.3
Identities = 13/104 (12%), Positives = 41/104 (39%)
Query: 80 EIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEK 139
++ K ++ K+ K +E + ++ ++ K K K ++ +E EK + +
Sbjct: 90 CLELTKYSQEMKQERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAEKAAQTAERL 149
Query: 140 KEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKK 183
++ + K K+ + + + + + ++D+
Sbjct: 150 DQDINATKADVEKAKQQAHLRSHMAEESKNEYAAQLQRFNRDQA 193
>d1weqa_ g.50.1.2 (A:) PHD finger protein 7 (NYD-SP6) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 85
Score = 26.4 bits (58), Expect = 2.1
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Query: 264 VQDDGSLPMIGCDGCDAW-YHWVCVGLVAEPETSDWFCPKCSKVDEGS 310
+D+G +I C C + H C L + W C +C S
Sbjct: 38 FEDEGRWRLILCATCGSHGTHRDCSSLRPNSK--KWECNECLPASGPS 83
>d1giqa1 d.166.1.1 (A:3-209) Enzymatic component (Ia) of iota-toxin
{Clostridium perfringens [TaxId: 1502]}
Length = 207
Score = 27.5 bits (61), Expect = 2.3
Identities = 27/155 (17%), Positives = 68/155 (43%), Gaps = 3/155 (1%)
Query: 81 IKKDKSIKKDKKTHK---KKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEK 137
I++ + KDK+ KKE E+++K D +K+ ++ +KD E+ + + + +
Sbjct: 1 IERPEDFLKDKENAIQWEKKEAERVEKNLDTLEKEALELYKKDSEQISNYSQTRQYFYDY 60
Query: 138 EKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKE 197
+ + +KE K + K K + I +S ++ + + + ++ +K +
Sbjct: 61 QIESNPREKEYKNLRNAISKNKIDKPINVYYFESPEKFAFNKEIRTENQNEISLEKFNEL 120
Query: 198 RSSHEKEVIPKLTFKFGTDMEEKTKRESSPKIVIK 232
+ + + ++ + FK + E E ++I
Sbjct: 121 KETIQDKLFKQDGFKDVSLYEPGNGDEKPTPLLIH 155
>d1ge9a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Aquifex
aeolicus [TaxId: 63363]}
Length = 184
Score = 27.6 bits (61), Expect = 2.3
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 75 SEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKD 120
E I++ + I +D+K + +K+ K + ++ KEK+
Sbjct: 135 REAKEMIEELEGISEDEKKRALERLQKLTDKYIDEINKLMEAKEKE 180
>d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 327
Score = 27.7 bits (61), Expect = 2.4
Identities = 16/116 (13%), Positives = 36/116 (31%), Gaps = 5/116 (4%)
Query: 113 KIKNKEKDKEKKIDKEKEKGKKEEKEKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSE 172
++K K K KK+ G + E + ++ E E + + + + K ++++
Sbjct: 132 QLKGKILLKGKKLGGLLPAGGENGSEATDVSDEVEAAEMEDEAVRSQVQHKPKEDKLKLV 191
Query: 173 KEKKS-----KDKDKKLKKEKLKKKKKEKERSSHEKEVIPKLTFKFGTDMEEKTKR 223
E K + E +S + +L + G
Sbjct: 192 PELSDMIIYCKSVHFGGFSSPGTSGQAFYEMASFSESRALRLLQESGNGFVRHNVS 247
>d1eh1a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Thermus
thermophilus [TaxId: 274]}
Length = 185
Score = 27.2 bits (60), Expect = 3.0
Identities = 12/63 (19%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 84 DKSIKKDKKTHKKKEKEKIKK-KKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEKKEE 142
+ ++ + + +E + K KK K+ +++ K E +I K ++ + + E+
Sbjct: 119 RQYAEEGRVAIRNIRREALDKLKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLAEK 178
Query: 143 KEK 145
KE+
Sbjct: 179 KEQ 181
>d2c6ja1 a.264.1.1 (A:15-308) Duffy receptor, alpha form {Plasmodium
knowlesi [TaxId: 5850]}
Length = 294
Score = 27.3 bits (60), Expect = 3.1
Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 3/104 (2%)
Query: 94 HKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEKKEEKEKKEEKEFKM 153
KE+ K+ +K K N + + KK++ + K +
Sbjct: 188 ELPKEQGKLNEK--CASKLYYNNMAICMLPLCHDACKSYDQWITRKKKQWDVLSTKFSSV 245
Query: 154 KEDKEKPVEKIRK-EEKDSEKEKKSKDKDKKLKKEKLKKKKKEK 196
K+ ++ E I + ++ K+ + + K
Sbjct: 246 KKTQKIGTENIATAYDILKQELNGFKEATFENEINKRDNLYNHL 289
Score = 27.3 bits (60), Expect = 3.6
Identities = 13/96 (13%), Positives = 29/96 (30%), Gaps = 3/96 (3%)
Query: 105 KKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEKKEEKEKKEEKEFKMKEDKEKPVEKI 164
+ K++ K+ K K + K + K+ + K
Sbjct: 187 SELPKEQGKLNEKCASKLYYNNMAICMLPLCHDACKSYDQWITRKKKQWDVLSTKFSSVK 246
Query: 165 RKEEKDSEKEKKSKDKDKKL---KKEKLKKKKKEKE 197
+ ++ +E + D K+ KE + + K
Sbjct: 247 KTQKIGTENIATAYDILKQELNGFKEATFENEINKR 282
Score = 26.9 bits (59), Expect = 4.4
Identities = 11/70 (15%), Positives = 25/70 (35%)
Query: 83 KDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEKKEE 142
D D+ +KK++ + K K K ++ D K++ ++ E
Sbjct: 218 HDACKSYDQWITRKKKQWDVLSTKFSSVKKTQKIGTENIATAYDILKQELNGFKEATFEN 277
Query: 143 KEKKEEKEFK 152
+ K + +
Sbjct: 278 EINKRDNLYN 287
>d2i71a1 e.72.1.1 (A:1-377) Hypothetical protein SSO1389 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 377
Score = 27.2 bits (60), Expect = 3.5
Identities = 16/96 (16%), Positives = 36/96 (37%), Gaps = 5/96 (5%)
Query: 37 EKMSSKEKTSPKEKEYSKVKDVELGVTP---MVPNIVKVTSSEDLGEIKK--DKSIKKDK 91
E SK+ + V ++ + I + + + DL ++ + K
Sbjct: 244 EDDLSKDPLLTPSENEINVVYKDMKYALSHALFYVISRFSGNVDLDTLRHYAETYADKVT 303
Query: 92 KTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDK 127
+ + E +KI+K + ++ + K + K DK
Sbjct: 304 RAIIENEVDKIEKYQMGSERKLLGEYMKVEGKGFDK 339
>d2okca1 c.66.1.45 (A:9-433) Type I restriction enzyme StySJI M
protein {Bacteroides thetaiotaomicron [TaxId: 818]}
Length = 425
Score = 27.2 bits (59), Expect = 3.8
Identities = 8/66 (12%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 95 KKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEKEK-GKKEEKEKKEEKEKKEEKEFKM 153
K + ++I + D K + +D + E E + +++ +
Sbjct: 347 KGQPTKEIWFYDYRTDIKHTLATNKLERHHLDDFVSCYNNRVEIYDAENNPQGRWRKYPV 406
Query: 154 KEDKEK 159
E +
Sbjct: 407 DEIIAR 412
>d1zgha2 c.65.1.1 (A:1-164) Methionyl-tRNAfmet formyltransferase
{Clostridium thermocellum [TaxId: 1515]}
Length = 164
Score = 26.2 bits (57), Expect = 5.3
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 87 IKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKIDKEK 129
I K + K ++ K+ + K + I NK++ +K+
Sbjct: 5 IATTKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
>d1wqga1 d.67.3.1 (A:2-184) Ribosome recycling factor, RRF
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 183
Score = 26.4 bits (58), Expect = 5.5
Identities = 9/59 (15%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 88 KKDKKTHKKKEKEKIKK-KKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEKKEEKEK 145
++ K + + ++ +++ + +K+ + +++ EK +DK + + E + KE
Sbjct: 121 EEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 179
Score = 25.7 bits (56), Expect = 9.0
Identities = 10/45 (22%), Positives = 24/45 (53%)
Query: 76 EDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKD 120
E+L I+K+ +D+ +K+ +K + + + +K+KE +
Sbjct: 136 EELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGE 180
>d1is1a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 185
Score = 26.1 bits (57), Expect = 6.5
Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 85 KSIKKDKKTHKKKEKEKIKK-KKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEKKEEK 143
+ + + ++ K KDK+ +++++ +++I K + K+ E K
Sbjct: 119 GEAEGGRVAVRNIRRDANNDLKALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEVLAAK 178
Query: 144 EK 145
EK
Sbjct: 179 EK 180
Score = 25.7 bits (56), Expect = 7.6
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 76 EDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKD 120
DL + KDK I +D+ ++E +K+ KK + + KEK+
Sbjct: 137 NDLKALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEVLAAKEKE 181
>d1ek8a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Escherichia
coli [TaxId: 562]}
Length = 185
Score = 25.7 bits (56), Expect = 7.7
Identities = 9/43 (20%), Positives = 20/43 (46%)
Query: 103 KKKKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEKKEEKEK 145
K K KDK+ ++ ++ + + K + K+ + +KE
Sbjct: 138 KVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEA 180
Score = 25.3 bits (55), Expect = 9.9
Identities = 10/45 (22%), Positives = 22/45 (48%)
Query: 76 EDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKD 120
+ + + KDK I +D + + +K+ KK + + +KE +
Sbjct: 137 DKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAE 181
>d1qcza_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole
carboxylase, PurE) {Escherichia coli [TaxId: 562]}
Length = 163
Score = 25.7 bits (56), Expect = 8.2
Identities = 4/27 (14%), Positives = 13/27 (48%)
Query: 83 KDKSIKKDKKTHKKKEKEKIKKKKDKK 109
DK + + +K + +++ + D +
Sbjct: 134 HDKELHQRLNDWRKAQTDEVLENPDPR 160
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain
{Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8
[TaxId: 37296]}
Length = 60
Score = 24.1 bits (51), Expect = 8.6
Identities = 10/53 (18%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Query: 252 DSKQVWICPAC-GVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPETSDWFCPKC 303
+ + V +C C + GC G H C+ + + C C
Sbjct: 2 EDEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLT-ISRNTACQIC 53
>d2o02a1 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) [TaxId:
9913]}
Length = 230
Score = 26.0 bits (57), Expect = 8.6
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 171 SEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKEVIPKL 209
S E+K++ +KK + + ++K E E +V+ L
Sbjct: 63 SSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLL 101
>d1dd5a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Thermotoga
maritima [TaxId: 2336]}
Length = 184
Score = 25.7 bits (56), Expect = 8.9
Identities = 14/62 (22%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 85 KSIKKDKKTHKKKEKEKIKK-KKDKKDKDKIKNKEKDKEKKIDKEKEKGKKEEKEKKEEK 143
+ +++ K + +E +KK K+D+K+ ++ K E +I K ++ ++ E E K
Sbjct: 118 EIVEEGKIAIRNIRREILKKIKEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVFEIK 177
Query: 144 EK 145
++
Sbjct: 178 KE 179
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.307 0.128 0.367
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,509,124
Number of extensions: 79158
Number of successful extensions: 1346
Number of sequences better than 10.0: 1
Number of HSP's gapped: 955
Number of HSP's successfully gapped: 300
Length of query: 410
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 323
Effective length of database: 1,213,086
Effective search space: 391826778
Effective search space used: 391826778
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 54 (25.3 bits)