Query psy5844
Match_columns 442
No_of_seqs 247 out of 2209
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 19:30:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5844.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5844hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 4.3E-79 1.5E-83 625.6 31.7 374 30-403 67-445 (490)
2 3rh9_A Succinate-semialdehyde 100.0 5.4E-77 1.9E-81 612.9 32.1 373 30-404 72-447 (506)
3 3ed6_A Betaine aldehyde dehydr 100.0 3.5E-77 1.2E-81 616.2 30.7 373 30-404 95-473 (520)
4 3ifg_A Succinate-semialdehyde 100.0 5.2E-77 1.8E-81 611.0 30.1 372 30-403 73-446 (484)
5 3ros_A NAD-dependent aldehyde 100.0 5.1E-77 1.7E-81 610.5 28.9 371 30-403 49-420 (484)
6 3u4j_A NAD-dependent aldehyde 100.0 3.1E-76 1.1E-80 610.2 31.4 372 30-403 86-460 (528)
7 3ek1_A Aldehyde dehydrogenase; 100.0 1.1E-76 3.7E-81 610.4 27.6 370 30-403 93-464 (504)
8 1bxs_A Aldehyde dehydrogenase; 100.0 7.3E-76 2.5E-80 604.3 32.6 373 31-403 85-458 (501)
9 4f3x_A Putative aldehyde dehyd 100.0 1.1E-76 3.7E-81 610.1 26.3 373 30-405 85-461 (498)
10 1o04_A Aldehyde dehydrogenase, 100.0 6.2E-76 2.1E-80 604.7 32.0 374 30-403 83-457 (500)
11 3iwj_A Putative aminoaldehyde 100.0 8.6E-76 2.9E-80 605.1 32.9 372 30-403 73-451 (503)
12 1a4s_A ALDH, betaine aldehyde 100.0 6.4E-76 2.2E-80 605.5 31.6 373 30-404 81-459 (503)
13 2o2p_A Formyltetrahydrofolate 100.0 1.8E-76 6.1E-81 610.5 26.2 373 30-403 99-479 (517)
14 3qan_A 1-pyrroline-5-carboxyla 100.0 1.8E-75 6E-80 605.9 33.2 370 30-402 97-474 (538)
15 3b4w_A Aldehyde dehydrogenase; 100.0 4E-76 1.4E-80 605.9 28.2 372 30-403 71-445 (495)
16 3k2w_A Betaine-aldehyde dehydr 100.0 7.6E-76 2.6E-80 604.7 29.8 374 30-405 73-452 (497)
17 2d4e_A 5-carboxymethyl-2-hydro 100.0 2.7E-75 9.2E-80 602.5 32.6 371 30-403 87-467 (515)
18 4e4g_A Methylmalonate-semialde 100.0 1.7E-75 5.9E-80 603.7 30.1 372 30-403 87-464 (521)
19 3jz4_A Succinate-semialdehyde 100.0 2.5E-75 8.5E-80 599.4 31.0 373 30-404 70-444 (481)
20 2imp_A Lactaldehyde dehydrogen 100.0 2.9E-75 1E-79 598.6 29.9 373 30-404 67-442 (479)
21 3r31_A BADH, betaine aldehyde 100.0 3.3E-75 1.1E-79 601.1 29.3 368 30-403 75-450 (517)
22 1wnd_A Putative betaine aldehy 100.0 6.3E-75 2.2E-79 596.5 31.0 371 30-403 83-457 (495)
23 3i44_A Aldehyde dehydrogenase; 100.0 7.9E-75 2.7E-79 596.1 31.5 369 30-401 86-459 (497)
24 3prl_A NADP-dependent glyceral 100.0 2.4E-75 8.3E-80 601.0 24.9 367 30-404 72-445 (505)
25 2w8n_A Succinate-semialdehyde 100.0 5.8E-75 2E-79 596.7 27.0 372 30-404 71-449 (487)
26 3etf_A Putative succinate-semi 100.0 2.3E-74 8E-79 590.1 30.7 372 30-403 52-423 (462)
27 2ve5_A BADH, betaine aldehyde 100.0 4.8E-74 1.6E-78 591.5 32.2 373 30-403 67-445 (490)
28 1uzb_A 1-pyrroline-5-carboxyla 100.0 1.5E-74 5.2E-79 597.6 28.5 371 30-403 97-475 (516)
29 1uxt_A Glyceraldehyde-3-phosph 100.0 1.2E-74 4.3E-79 595.7 27.6 367 30-403 78-453 (501)
30 3pqa_A Lactaldehyde dehydrogen 100.0 1.5E-74 5E-79 592.6 27.4 365 30-404 57-426 (486)
31 2j6l_A Aldehyde dehydrogenase 100.0 4.6E-74 1.6E-78 591.8 31.2 372 30-403 82-460 (500)
32 4dng_A Uncharacterized aldehyd 100.0 4.5E-74 1.5E-78 591.0 28.4 371 30-405 67-441 (485)
33 3r64_A NAD dependent benzaldeh 100.0 8.1E-74 2.8E-78 591.0 28.6 370 30-405 73-448 (508)
34 3ty7_A Putative aldehyde dehyd 100.0 2.8E-73 9.7E-78 584.1 30.5 368 30-402 68-439 (478)
35 1t90_A MMSDH, probable methylm 100.0 1.2E-73 3.9E-78 587.3 27.5 371 30-403 66-439 (486)
36 3ju8_A Succinylglutamic semial 100.0 3.1E-73 1.1E-77 584.7 30.5 372 30-404 65-439 (490)
37 1euh_A NADP dependent non phos 100.0 1.8E-73 6.1E-78 584.8 26.5 366 30-403 63-436 (475)
38 4e3x_A Delta-1-pyrroline-5-car 100.0 3.4E-73 1.2E-77 590.0 25.3 379 24-404 118-511 (563)
39 4f9i_A Proline dehydrogenase/d 100.0 7.4E-72 2.5E-76 609.8 29.0 374 30-405 591-971 (1026)
40 4h7n_A Aldehyde dehydrogenase; 100.0 4.6E-72 1.6E-76 574.1 24.6 372 30-406 51-425 (474)
41 3sza_A Aldehyde dehydrogenase, 100.0 1.8E-71 6.1E-76 567.8 28.0 365 30-404 41-409 (469)
42 3lns_A Benzaldehyde dehydrogen 100.0 1.7E-69 5.8E-74 552.7 27.6 363 30-404 51-418 (457)
43 2y53_A Aldehyde dehydrogenase 100.0 1.8E-69 6.3E-74 562.2 27.8 368 31-403 68-471 (534)
44 3haz_A Proline dehydrogenase; 100.0 5.9E-69 2E-73 585.7 28.0 369 30-404 573-947 (1001)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 2.2E-66 7.5E-71 536.2 24.3 358 30-403 53-439 (510)
46 3v4c_A Aldehyde dehydrogenase 100.0 2.9E-66 9.8E-71 537.5 19.4 361 30-404 86-475 (528)
47 3k9d_A LMO1179 protein, aldehy 100.0 3.9E-62 1.3E-66 499.3 15.5 354 29-405 34-405 (464)
48 1vlu_A Gamma-glutamyl phosphat 100.0 8E-62 2.7E-66 496.0 13.9 336 30-404 37-399 (468)
49 3my7_A Alcohol dehydrogenase/a 100.0 1.4E-61 4.8E-66 493.6 13.8 351 28-403 28-401 (452)
50 2h5g_A Delta 1-pyrroline-5-car 100.0 7.5E-59 2.6E-63 473.5 14.6 325 30-404 52-394 (463)
51 4ghk_A Gamma-glutamyl phosphat 100.0 2.7E-58 9.3E-63 468.0 17.6 327 30-404 49-398 (444)
52 1o20_A Gamma-glutamyl phosphat 100.0 2.3E-58 7.9E-63 466.3 14.5 325 30-404 37-381 (427)
53 2wme_A BADH, betaine aldehyde 99.3 2.9E-12 9.9E-17 131.0 6.0 124 318-442 285-440 (490)
54 4h7n_A Aldehyde dehydrogenase; 99.1 1.7E-11 5.9E-16 125.2 4.9 119 323-442 270-417 (474)
55 3rh9_A Succinate-semialdehyde 99.1 2.8E-11 9.6E-16 124.2 6.2 120 322-442 293-441 (506)
56 3ifg_A Succinate-semialdehyde 99.1 2.4E-11 8.1E-16 124.2 5.6 123 319-442 291-441 (484)
57 3ek1_A Aldehyde dehydrogenase; 99.1 1.8E-11 6.1E-16 125.6 4.3 119 323-442 315-459 (504)
58 3ros_A NAD-dependent aldehyde 99.1 3.3E-11 1.1E-15 123.1 5.9 126 316-442 262-415 (484)
59 3i44_A Aldehyde dehydrogenase; 99.1 3.5E-11 1.2E-15 123.3 5.9 121 321-442 305-456 (497)
60 3ed6_A Betaine aldehyde dehydr 99.1 2.6E-11 9E-16 124.9 4.9 121 321-442 315-467 (520)
61 3jz4_A Succinate-semialdehyde 99.1 3.7E-11 1.3E-15 122.9 5.7 119 323-442 292-438 (481)
62 3iwj_A Putative aminoaldehyde 99.1 3.6E-11 1.2E-15 123.5 5.6 119 323-442 298-446 (503)
63 3prl_A NADP-dependent glyceral 99.1 3.4E-11 1.2E-15 123.6 5.2 119 323-442 297-439 (505)
64 3sza_A Aldehyde dehydrogenase, 99.1 3.7E-11 1.3E-15 122.4 4.7 123 319-442 260-403 (469)
65 3u4j_A NAD-dependent aldehyde 99.1 4.7E-11 1.6E-15 123.2 5.2 119 323-442 308-455 (528)
66 2o2p_A Formyltetrahydrofolate 99.1 3.6E-11 1.2E-15 123.7 4.4 118 324-442 327-474 (517)
67 1o04_A Aldehyde dehydrogenase, 99.1 6.6E-11 2.2E-15 121.4 5.3 119 323-442 306-452 (500)
68 3qan_A 1-pyrroline-5-carboxyla 99.1 4.9E-11 1.7E-15 123.3 4.4 124 318-442 320-470 (538)
69 2ve5_A BADH, betaine aldehyde 99.1 9E-11 3.1E-15 120.4 6.2 120 322-442 289-440 (490)
70 3k2w_A Betaine-aldehyde dehydr 99.1 6E-11 2.1E-15 121.7 4.9 119 323-442 295-445 (497)
71 4e4g_A Methylmalonate-semialde 99.1 4.9E-11 1.7E-15 122.9 4.0 118 324-442 309-459 (521)
72 1a4s_A ALDH, betaine aldehyde 99.1 9.3E-11 3.2E-15 120.4 6.0 127 315-442 293-453 (503)
73 3lns_A Benzaldehyde dehydrogen 99.1 6.6E-11 2.3E-15 120.3 4.9 119 323-442 274-412 (457)
74 4dng_A Uncharacterized aldehyd 99.1 1.1E-10 3.8E-15 119.5 6.2 117 325-442 293-434 (485)
75 3r31_A BADH, betaine aldehyde 99.1 5E-11 1.7E-15 122.7 3.5 119 323-442 296-445 (517)
76 1bxs_A Aldehyde dehydrogenase; 99.1 8.2E-11 2.8E-15 120.7 5.0 119 323-442 307-453 (501)
77 4f3x_A Putative aldehyde dehyd 99.0 3E-11 1E-15 123.9 1.6 119 323-442 307-454 (498)
78 3b4w_A Aldehyde dehydrogenase; 99.0 1E-10 3.4E-15 119.9 5.3 119 323-442 292-440 (495)
79 3r64_A NAD dependent benzaldeh 99.0 9E-11 3.1E-15 120.8 4.9 123 319-442 294-441 (508)
80 1uzb_A 1-pyrroline-5-carboxyla 99.0 1.1E-10 3.7E-15 120.4 4.9 119 323-442 326-470 (516)
81 3pqa_A Lactaldehyde dehydrogen 99.0 8.4E-11 2.9E-15 120.2 4.0 117 323-442 279-420 (486)
82 2w8n_A Succinate-semialdehyde 99.0 1.5E-10 5.1E-15 118.5 5.7 119 323-442 296-443 (487)
83 2j6l_A Aldehyde dehydrogenase 99.0 1.5E-10 5.3E-15 118.8 5.6 119 323-442 307-455 (500)
84 2imp_A Lactaldehyde dehydrogen 99.0 1.8E-10 6E-15 117.8 6.0 124 318-442 284-436 (479)
85 3ty7_A Putative aldehyde dehyd 99.0 2.1E-10 7.3E-15 117.2 6.5 120 322-442 285-435 (478)
86 1wnd_A Putative betaine aldehy 99.0 1.2E-10 4.2E-15 119.3 4.6 124 318-442 300-452 (495)
87 3etf_A Putative succinate-semi 99.0 1.4E-10 4.7E-15 118.2 4.9 119 323-442 272-418 (462)
88 1uxt_A Glyceraldehyde-3-phosph 99.0 9.6E-11 3.3E-15 120.3 3.7 118 324-442 302-448 (501)
89 2d4e_A 5-carboxymethyl-2-hydro 99.0 1.6E-10 5.5E-15 119.0 5.4 120 321-442 307-462 (515)
90 1euh_A NADP dependent non phos 99.0 1.7E-10 5.9E-15 117.8 4.7 118 324-442 289-430 (475)
91 3ju8_A Succinylglutamic semial 98.9 5.1E-10 1.7E-14 114.7 5.0 94 347-442 323-433 (490)
92 4e3x_A Delta-1-pyrroline-5-car 98.9 4.3E-10 1.5E-14 116.6 4.2 119 323-442 352-505 (563)
93 4f9i_A Proline dehydrogenase/d 98.9 6.4E-10 2.2E-14 122.1 5.7 119 323-442 819-964 (1026)
94 2y53_A Aldehyde dehydrogenase 98.9 6.2E-10 2.1E-14 115.2 4.7 119 323-442 303-466 (534)
95 1t90_A MMSDH, probable methylm 98.9 5E-10 1.7E-14 114.6 3.7 95 347-442 322-434 (486)
96 1ez0_A ALDH, aldehyde dehydrog 98.7 4.8E-09 1.6E-13 108.0 4.0 123 319-442 289-434 (510)
97 3haz_A Proline dehydrogenase; 98.7 6E-09 2E-13 114.2 4.5 117 323-442 798-941 (1001)
98 3v4c_A Aldehyde dehydrogenase 98.6 6.3E-09 2.1E-13 107.5 0.4 123 319-442 323-469 (528)
99 1vlu_A Gamma-glutamyl phosphat 98.5 7E-08 2.4E-12 98.1 4.9 124 310-442 262-393 (468)
100 4ghk_A Gamma-glutamyl phosphat 98.4 8.1E-08 2.8E-12 97.1 4.0 112 318-442 278-392 (444)
101 3k9d_A LMO1179 protein, aldehy 98.3 7.9E-08 2.7E-12 97.7 1.2 94 347-442 298-398 (464)
102 3my7_A Alcohol dehydrogenase/a 98.2 1.2E-07 4.1E-12 96.1 -1.8 114 323-442 250-396 (452)
103 1o20_A Gamma-glutamyl phosphat 98.2 6.8E-07 2.3E-11 89.8 3.7 57 386-442 316-375 (427)
104 2h5g_A Delta 1-pyrroline-5-car 98.0 2E-06 6.9E-11 87.2 3.1 59 384-442 327-388 (463)
105 1kae_A HDH, histidinol dehydro 92.6 8.2 0.00028 37.7 21.3 233 95-408 113-359 (434)
106 4gic_A HDH, histidinol dehydro 92.1 8.5 0.00029 37.5 17.4 164 95-274 119-293 (423)
107 1b93_A Protein (methylglyoxal 35.2 38 0.0013 28.1 4.2 113 107-245 12-135 (152)
108 3v42_A Folliculin; tumor suppr 34.1 29 0.00098 30.9 3.4 68 123-197 21-88 (226)
109 3ojo_A CAP5O; rossmann fold, c 30.6 2.1E+02 0.0072 27.9 9.5 85 119-204 108-196 (431)
110 1vmd_A MGS, methylglyoxal synt 28.7 34 0.0012 29.1 2.9 123 97-245 17-151 (178)
111 2zfz_A Arginine repressor; DNA 27.0 1E+02 0.0035 22.1 4.9 38 131-172 19-56 (79)
112 1b4b_A Arginine repressor; cor 26.4 96 0.0033 21.8 4.5 38 131-172 11-48 (71)
113 2fiu_A Conserved hypothetical 24.5 96 0.0033 23.3 4.6 60 292-371 16-76 (99)
114 2yvq_A Carbamoyl-phosphate syn 24.0 65 0.0022 26.1 3.7 62 152-215 60-132 (143)
115 1xxa_A ARGR, arginine represso 22.4 79 0.0027 22.7 3.5 39 131-172 13-51 (78)
116 3v4g_A Arginine repressor; vib 21.8 76 0.0026 27.0 3.7 44 126-172 110-153 (180)
117 3mwd_B ATP-citrate synthase; A 21.5 4.2E+02 0.014 24.7 9.3 86 130-221 166-264 (334)
118 2p5m_A Arginine repressor; alp 21.2 95 0.0032 22.6 3.7 37 131-171 23-59 (83)
119 2xw6_A MGS, methylglyoxal synt 20.1 22 0.00077 28.8 0.1 61 152-214 41-111 (134)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=4.3e-79 Score=625.62 Aligned_cols=374 Identities=44% Similarity=0.742 Sum_probs=350.1
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 109 (442)
+|..+++.......+.++.+++++++|+|||+.+++..|+..+++.++|++.+++++.++..+...+...+++++|+|||
T Consensus 67 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 146 (490)
T 2wme_A 67 QRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVV 146 (490)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEE
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEE
Confidence 45555555555555667788999999999999999875799999999999999988877666655677789999999999
Q ss_pred EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA 188 (442)
Q Consensus 110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~ 188 (442)
++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ ++++.|+.||+++.|.
T Consensus 147 ~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~ 226 (490)
T 2wme_A 147 AGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKIS 226 (490)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEE
T ss_pred EEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEE
Confidence 999999999999999999999999999999999999999999999999999999999999987 8999999999999999
Q ss_pred ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844 189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS 268 (442)
Q Consensus 189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l 268 (442)
||||+.+|+.+.+.++.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 227 FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l 306 (490)
T 2wme_A 227 FTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKV 306 (490)
T ss_dssp EESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHH
T ss_pred EECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHH
Confidence 99999999988765543688999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC----CCCcccccceeccCcchhHHHHH
Q psy5844 269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKIARE 344 (442)
Q Consensus 269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~~~~~~~~ 344 (442)
+++++++++|||.|+++++||+++..+++++.++|++++.+|+++++||.+.. ..|+|++|||+.+++++|.++++
T Consensus 307 ~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~e 386 (490)
T 2wme_A 307 LERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVRE 386 (490)
T ss_dssp HHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHS
T ss_pred HHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhc
Confidence 99999999999999999999999999999999999999999999999998643 36899999999999999999999
Q ss_pred hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
|+||||++++.|++++|+|+++|+++|||+++|||+|.+++.++++++++|.|+||+..
T Consensus 387 EiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~ 445 (490)
T 2wme_A 387 EIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWG 445 (490)
T ss_dssp CCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCS
T ss_pred cccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999764
No 2
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=5.4e-77 Score=612.88 Aligned_cols=373 Identities=35% Similarity=0.579 Sum_probs=348.5
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEe-eccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRH-EPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gv 108 (442)
.+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++..+++..+...+.+.+...++.+ +|+||
T Consensus 72 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 150 (506)
T 3rh9_A 72 TRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQG-EVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGV 150 (506)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCS
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceE
Confidence 3444444444444556777899999999999999997 999999999999999988766654433456678889 99999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV 187 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v 187 (442)
|++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ +.++.|+.||++|.|
T Consensus 151 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I 230 (506)
T 3rh9_A 151 TGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPML 230 (506)
T ss_dssp EEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEE
T ss_pred EEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEE
Confidence 9999999999999999999999999999999999999999999999999999999999999977 899999999999999
Q ss_pred eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844 188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267 (442)
Q Consensus 188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~ 267 (442)
+||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 231 ~FTGS~~vG~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 309 (506)
T 3rh9_A 231 SFTGSTEVGRKLIVDTA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQK 309 (506)
T ss_dssp EEESCHHHHHHHHHHTT-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHH
T ss_pred EEECCHHHHHHHHHHhh-hcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHH
Confidence 99999999999999988 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCC-CCcccccceeccCcchhHHHHHhh
Q psy5844 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD-KGFYVQPTVFANVRDDMKIAREEI 346 (442)
Q Consensus 268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~-~g~~v~pti~~~~~~~~~~~~~e~ 346 (442)
|+++++++++|+|.|+++++||+++..+++++.++|++++.+|+++++||...+. .|+|++|||+.++.+++.++++|+
T Consensus 310 l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 389 (506)
T 3rh9_A 310 LAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEET 389 (506)
T ss_dssp HHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCC
T ss_pred HHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccc
Confidence 9999999999999999999999999999999999999999999999999976444 789999999999999999999999
Q ss_pred cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844 347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE 404 (442)
Q Consensus 347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~ 404 (442)
||||+++..|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus 390 FGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~ 447 (506)
T 3rh9_A 390 FGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTG 447 (506)
T ss_dssp CSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCC
T ss_pred cCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCC
Confidence 9999999999999999999999999999999999999999999999999999999763
No 3
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=3.5e-77 Score=616.18 Aligned_cols=373 Identities=42% Similarity=0.682 Sum_probs=349.1
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv 108 (442)
.|..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++.++++..+...+.. .+...++.++|+||
T Consensus 95 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV 173 (520)
T 3ed6_A 95 TRGKKVRAIADKIKEHREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGV 173 (520)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCE
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccE
Confidence 3444555554444556778899999999999999998 999999999999999887766555443 46678999999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV 187 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v 187 (442)
|++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||+++.|
T Consensus 174 V~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V 253 (520)
T 3ed6_A 174 VTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLV 253 (520)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEE
T ss_pred EEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEE
Confidence 9999999999999999999999999999999999999999999999999999999999999976 899999999999999
Q ss_pred eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844 188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267 (442)
Q Consensus 188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~ 267 (442)
.||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 254 ~FTGS~~vG~~i~~~aa-~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~ 332 (520)
T 3ed6_A 254 SFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQA 332 (520)
T ss_dssp EEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHhh-hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHH
Confidence 99999999999999988 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC----CCCcccccceeccCcchhHHHH
Q psy5844 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKIAR 343 (442)
Q Consensus 268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~~~~~~~ 343 (442)
|+++++++++|+|.|+++++||+++..+++++.++|++++.+|+++++||.... ..|+|++|||+.+++++|.+++
T Consensus 333 l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~ 412 (520)
T 3ed6_A 333 LIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQ 412 (520)
T ss_dssp HHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHH
T ss_pred HHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCcccc
Confidence 999999999999999999999999999999999999999999999999997642 4789999999999999999999
Q ss_pred HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844 344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE 404 (442)
Q Consensus 344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~ 404 (442)
+|+||||++++.|++++|+|+++|+.+|||+++|||+|.+++.++++++++|.|+||+...
T Consensus 413 eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~ 473 (520)
T 3ed6_A 413 EEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHP 473 (520)
T ss_dssp SCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCC
T ss_pred CceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCC
Confidence 9999999999999999999999999999999999999999999999999999999998754
No 4
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=5.2e-77 Score=610.96 Aligned_cols=372 Identities=36% Similarity=0.618 Sum_probs=348.3
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv 108 (442)
.|..+++.......+.++.+++++++|+|||+.+++. |+..+++.++|++.++++..+...+.. .+...+++++|+||
T Consensus 73 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV 151 (484)
T 3ifg_A 73 ERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGV 151 (484)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcE
Confidence 3444555554444555777899999999999999998 999999999999998877766554443 46678999999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV 187 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v 187 (442)
|++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||+++.|
T Consensus 152 v~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v 231 (484)
T 3ifg_A 152 CAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKL 231 (484)
T ss_dssp EEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEE
T ss_pred EEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEE
Confidence 9999999999999999999999999999999999999999999999999999999999999977 899999999999999
Q ss_pred eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844 188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267 (442)
Q Consensus 188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~ 267 (442)
.||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 232 ~FTGS~~~G~~i~~~aa-~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 310 (484)
T 3ifg_A 232 SFTGSTAVGRLLMAQSA-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADK 310 (484)
T ss_dssp EEESCHHHHHHHHHHTG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHH
T ss_pred EEECCHHHHHHHHHHhh-ccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHH
Confidence 99999999999999988 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhc
Q psy5844 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF 347 (442)
Q Consensus 268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~f 347 (442)
|.++++++++|+|.|+++++||+++..+++++.++|++++.+|+++++||...+..|+|++|||+.++.++|.++++|+|
T Consensus 311 l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF 390 (484)
T 3ifg_A 311 LAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETF 390 (484)
T ss_dssp HHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCC
T ss_pred HHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeee
Confidence 99999999999999999999999999999999999999999999999999875557999999999999999999999999
Q ss_pred CCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 348 gPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
|||++++.|++++|+|+++|+++|||+++|||+|.+++.++++++++|.|+||+..
T Consensus 391 GPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~ 446 (484)
T 3ifg_A 391 GPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGL 446 (484)
T ss_dssp SSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSC
T ss_pred CcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999853
No 5
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=5.1e-77 Score=610.51 Aligned_cols=371 Identities=26% Similarity=0.411 Sum_probs=348.8
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 109 (442)
.+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++..+++..+...+...+...++.++|+|||
T Consensus 49 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV 127 (484)
T 3ros_A 49 SRAEILHDIANALKEHEDELAKMMTLEMGKLLSESKE-EVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVI 127 (484)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceE
Confidence 4555555555555666788899999999999999997 999999999999999887766644433566789999999999
Q ss_pred EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA 188 (442)
Q Consensus 110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~ 188 (442)
++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ +.++ |+.||++|.|+
T Consensus 128 ~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~ 206 (484)
T 3ros_A 128 MACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVA 206 (484)
T ss_dssp EEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEE
T ss_pred EEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEE
Confidence 999999999999999999999999999999999999999999999999999999999999987 6777 99999999999
Q ss_pred ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844 189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS 268 (442)
Q Consensus 189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l 268 (442)
||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 207 fTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 285 (484)
T 3ros_A 207 LTGSERGGSAVAEAAG-KNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHEL 285 (484)
T ss_dssp EESCHHHHHHHHHHHH-HTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHH
T ss_pred EECCHHHHHHHHHHHh-ccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHH
Confidence 9999999999999988 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcC
Q psy5844 269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348 (442)
Q Consensus 269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fg 348 (442)
+++++++++|+|.|+++++||+++..+++++.++|++++.+|+++++||...+..|+|+.|||+.++.+++.++++|+||
T Consensus 286 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFG 365 (484)
T 3ros_A 286 KNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFG 365 (484)
T ss_dssp HHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCS
T ss_pred HHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCccccccccc
Confidence 99999999999999999999999999999999999999999999999998756689999999999999999999999999
Q ss_pred CcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 349 Pvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
||+++..|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus 366 PVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~ 420 (484)
T 3ros_A 366 PIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRW 420 (484)
T ss_dssp SEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCC
T ss_pred ceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999854
No 6
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.1e-76 Score=610.18 Aligned_cols=372 Identities=38% Similarity=0.667 Sum_probs=348.2
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv 108 (442)
.+..+++.......+.++.+++++++|+|||+.++.. |+..+++.+++++.++++..++..+.. .+...++.++|+||
T Consensus 86 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 164 (528)
T 3u4j_A 86 ERSRLMFKVADLILARQEELALIESLEVGKPIAQARG-EIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGV 164 (528)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceE
Confidence 3444444444444455677799999999999999976 999999999999999887766555544 56678999999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV 187 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v 187 (442)
|++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ +.++.|+.||++|.|
T Consensus 165 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I 244 (528)
T 3u4j_A 165 VGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMV 244 (528)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEE
T ss_pred EEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEE
Confidence 9999999999999999999999999999999999999999999999999999999999999976 899999999999999
Q ss_pred eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844 188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267 (442)
Q Consensus 188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~ 267 (442)
.||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 245 ~FTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 323 (528)
T 3u4j_A 245 AFTGSVRVGTKLGEIAA-RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMER 323 (528)
T ss_dssp EEESCHHHHHHHHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHH-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHH
Confidence 99999999999999988 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCC-CCcccccceeccCcchhHHHHHhh
Q psy5844 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD-KGFYVQPTVFANVRDDMKIAREEI 346 (442)
Q Consensus 268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~-~g~~v~pti~~~~~~~~~~~~~e~ 346 (442)
|+++++++++|+|.|+++++||+++..+++++.++|++++.+|+++++||...+. .|+|+.|||+.++.+++.++++|+
T Consensus 324 l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 403 (528)
T 3u4j_A 324 LLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEI 403 (528)
T ss_dssp HHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCC
T ss_pred HHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCcccccee
Confidence 9999999999999999999999999999999999999999999999999986543 789999999999999999999999
Q ss_pred cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
||||+++..|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||+..
T Consensus 404 FGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~ 460 (528)
T 3u4j_A 404 FGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVI 460 (528)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCS
T ss_pred eccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCC
Confidence 999999999999999999999999999999999999999999999999999999975
No 7
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.1e-76 Score=610.40 Aligned_cols=370 Identities=38% Similarity=0.638 Sum_probs=346.2
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv 108 (442)
.+.++++.......+.++.+++++++|+|||+.+++. |+..+++.++|++.++++..+...+.. .+...++.++|+||
T Consensus 93 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV 171 (504)
T 3ek1_A 93 ERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGV 171 (504)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceE
Confidence 3444555554444555677799999999999999998 999999999999998877666544433 45678999999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV 187 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v 187 (442)
|++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||+++.|
T Consensus 172 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V 251 (504)
T 3ek1_A 172 TAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKL 251 (504)
T ss_dssp EEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEE
T ss_pred EEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEE
Confidence 9999999999999999999999999999999999999999999999999999999999999877 899999999999999
Q ss_pred eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844 188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267 (442)
Q Consensus 188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~ 267 (442)
.||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 252 ~FTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~ 330 (504)
T 3ek1_A 252 SFTGSTEVGRLLMAQCA-PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEK 330 (504)
T ss_dssp EEESCHHHHHHHHHHHG-GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHhhh-hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHH
Confidence 99999999999999988 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhc
Q psy5844 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF 347 (442)
Q Consensus 268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~f 347 (442)
|+++++++++|||.|+++++||+++..+++++.++|++++.+|+++++||.. ..|+|+.|||+.++.+++.++++|+|
T Consensus 331 l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiF 408 (504)
T 3ek1_A 331 LAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETF 408 (504)
T ss_dssp HHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCC
T ss_pred HHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhccccc
Confidence 9999999999999999999999999999999999999999999999999976 36899999999999999999999999
Q ss_pred CCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 348 gPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
|||+++++|++++|+|+++|+.+|||+++|||+|.+++.++++++++|.|+||+..
T Consensus 409 GPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~ 464 (504)
T 3ek1_A 409 GPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGL 464 (504)
T ss_dssp SSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSC
T ss_pred CcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCC
Confidence 99999999999999999999999999999999999999999999999999999865
No 8
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=7.3e-76 Score=604.34 Aligned_cols=373 Identities=59% Similarity=1.000 Sum_probs=345.0
Q ss_pred CCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceEE
Q psy5844 31 KPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCG 110 (442)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 110 (442)
+.++++.......+.++.+++++++|+|||+.++...|+..+++.+++++..+++..++..+...+...++.++|+|||+
T Consensus 85 R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~ 164 (501)
T 1bxs_A 85 RGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCG 164 (501)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEE
Confidence 34444444444445566779999999999999986459999999999999998877665444334556789999999999
Q ss_pred EecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEee
Q psy5844 111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAF 189 (442)
Q Consensus 111 ~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~f 189 (442)
+|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ +.++.|+.||+++.|.|
T Consensus 165 ~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~F 244 (501)
T 1bxs_A 165 QIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAF 244 (501)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999966 88999999999999999
Q ss_pred cCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHH
Q psy5844 190 TGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSG 269 (442)
Q Consensus 190 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~ 269 (442)
|||+.+|+.|++.++.+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+
T Consensus 245 TGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 324 (501)
T 1bxs_A 245 TGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSV 324 (501)
T ss_dssp ESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHH
Confidence 99999999999988723889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcCC
Q psy5844 270 ERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGP 349 (442)
Q Consensus 270 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgP 349 (442)
++++++++|||.|+++++||+++..+++++.++|++++++|+++++||...+..|+|+.|||+.++.+++.++++|+|||
T Consensus 325 ~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP 404 (501)
T 1bxs_A 325 ERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGP 404 (501)
T ss_dssp HHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSS
T ss_pred HHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccc
Confidence 99999999999999999999999999999999999999999999999976444689999999999999999999999999
Q ss_pred cccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 350 VQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 350 vl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
|++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus 405 Vl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~ 458 (501)
T 1bxs_A 405 VQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYS 458 (501)
T ss_dssp EEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCC
T ss_pred eEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCC
Confidence 999999999999999999999999999999999999999999999999999864
No 9
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1.1e-76 Score=610.08 Aligned_cols=373 Identities=37% Similarity=0.634 Sum_probs=348.6
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhh-chhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccc
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMS-YSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVG 107 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a-~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~G 107 (442)
.|..+++.......+.++.+++++++|+|||+.++ .. |+..+++.+++++.++++..+...+.. .+...++.++|+|
T Consensus 85 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~G 163 (498)
T 4f3x_A 85 ERSNALLKIADAIEKEADEFAALEALNCGKPINAVKND-ELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIG 163 (498)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHT-HHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHH-HHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcc
Confidence 34455555545445567778999999999999999 66 999999999999999877666544332 5667899999999
Q ss_pred eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccE
Q psy5844 108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDK 186 (442)
Q Consensus 108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~ 186 (442)
||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++ +.++.|+.||+++.
T Consensus 164 Vv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~ 242 (498)
T 4f3x_A 164 IVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGM 242 (498)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCE
T ss_pred eEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCE
Confidence 999999999999999999999999999999999999999999999999999 9999999999977 89999999999999
Q ss_pred EeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHH
Q psy5844 187 VAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVA 266 (442)
Q Consensus 187 v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~ 266 (442)
|.||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|++
T Consensus 243 V~FTGS~~~G~~i~~~aa-~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~ 321 (498)
T 4f3x_A 243 VSITGDIATGKKVLAAAA-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVA 321 (498)
T ss_dssp EEEESCHHHHHHHHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHH
T ss_pred EEEECCHHHHHHHHHHHH-hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHH
Confidence 999999999999999998 6899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCC-EEEeCCcccCCCCcccccceeccCcchhHHHHHh
Q psy5844 267 RSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGA-QLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE 345 (442)
Q Consensus 267 ~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga-~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e 345 (442)
+|+++++++++|+|.|+++++||+++..+++++.++|++++++|+ ++++||...+..|+|++|||+.++.+++.++++|
T Consensus 322 ~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE 401 (498)
T 4f3x_A 322 DLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRRE 401 (498)
T ss_dssp HHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSC
T ss_pred HHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCc
Confidence 999999999999999999999999999999999999999999999 9999998765689999999999999999999999
Q ss_pred hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844 346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE 405 (442)
Q Consensus 346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~ 405 (442)
+||||+++++|++++|+|+++|+.+|||+++|||+|.+++.++++++++|.|+||+....
T Consensus 402 iFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~ 461 (498)
T 4f3x_A 402 VFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFML 461 (498)
T ss_dssp CCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC
T ss_pred eeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999997643
No 10
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=6.2e-76 Score=604.75 Aligned_cols=374 Identities=65% Similarity=1.069 Sum_probs=345.9
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 109 (442)
.+..+++.......+.++.+++++++|+|||+.++...|+..+++.++|++..+++..++..+...+...++.++|+|||
T Consensus 83 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv 162 (500)
T 1o04_A 83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 162 (500)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcE
Confidence 34445555545445566777999999999999998655999999999999998877766544433455678999999999
Q ss_pred EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA 188 (442)
Q Consensus 110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~ 188 (442)
++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++ +.++.|+.||+++.|.
T Consensus 163 ~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~ 242 (500)
T 1o04_A 163 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVA 242 (500)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEE
T ss_pred EEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEE
Confidence 999999999999999999999999999999999999999999999999999999999999966 8899999999999999
Q ss_pred ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844 189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS 268 (442)
Q Consensus 189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l 268 (442)
||||+.+|+.|++.++.+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 243 FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 322 (500)
T 1o04_A 243 FTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERS 322 (500)
T ss_dssp EESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHH
Confidence 99999999999998873489999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcC
Q psy5844 269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348 (442)
Q Consensus 269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fg 348 (442)
+++++++++|||.|+++++||+++..+++++.++|++++++|+++++||...+..|+|+.|||+.++.++|.++++|+||
T Consensus 323 ~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFG 402 (500)
T 1o04_A 323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFG 402 (500)
T ss_dssp HHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCS
T ss_pred HHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccc
Confidence 99999999999999999999999999999999999999999999999997644468999999999999999999999999
Q ss_pred CcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 349 Pvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
||++++.|++++|+|+++|+.+|||+++|||+|.+.+.++++++++|.|+||+..
T Consensus 403 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~ 457 (500)
T 1o04_A 403 PVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYD 457 (500)
T ss_dssp SEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSS
T ss_pred eEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999865
No 11
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=8.6e-76 Score=605.08 Aligned_cols=372 Identities=40% Similarity=0.702 Sum_probs=346.4
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccc---ccC-CCcceEEEeec
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI---PIN-GDFFAYTRHEP 105 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~P 105 (442)
.|..+++.......+.++.+++++++|+|||+.++.. |+..+++.+++++.+++++.+... ..+ .+...++.++|
T Consensus 73 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 151 (503)
T 3iwj_A 73 VRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREP 151 (503)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcC
Confidence 3444445544444566778899999999999999998 999999999999998877655431 112 45678999999
Q ss_pred cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCc
Q psy5844 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGV 184 (442)
Q Consensus 106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v 184 (442)
+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ +.++.|+.||++
T Consensus 152 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v 231 (503)
T 3iwj_A 152 IGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDV 231 (503)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTC
T ss_pred CceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999977 899999999999
Q ss_pred cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844 185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF 264 (442)
Q Consensus 185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f 264 (442)
+.|.||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|
T Consensus 232 ~~I~FTGS~~~G~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 310 (503)
T 3iwj_A 232 DKVAFTGSSATGSKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEF 310 (503)
T ss_dssp CEEEEESCHHHHHHHHHHHG-GGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHH
T ss_pred cEEEEECcHHHHHHHHHHHh-cCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHH
Confidence 99999999999999999988 58999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC--CCCcccccceeccCcchhHHH
Q psy5844 265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKIA 342 (442)
Q Consensus 265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~v~pti~~~~~~~~~~~ 342 (442)
+++|+++++++++|+|.++++++||+++..+++++.++|++++.+|+++++||...+ ..|+|++|||+.++.++|.++
T Consensus 311 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~ 390 (503)
T 3iwj_A 311 LNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIW 390 (503)
T ss_dssp HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHH
T ss_pred HHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhh
Confidence 999999999999999999999999999999999999999999999999999997654 579999999999999999999
Q ss_pred HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
++|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus 391 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~ 451 (503)
T 3iwj_A 391 REEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQ 451 (503)
T ss_dssp HSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSC
T ss_pred CceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999864
No 12
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=6.4e-76 Score=605.54 Aligned_cols=373 Identities=41% Similarity=0.733 Sum_probs=345.9
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 109 (442)
.+.++++.......+.++.+++++++|+|||+.++.. |+..+++.++|++.++++..++..+.+.+...++.++|+|||
T Consensus 81 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv 159 (503)
T 1a4s_A 81 ERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVC 159 (503)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceE
Confidence 3445555554555556777799999999999999988 999999999999999887766544333344678999999999
Q ss_pred EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEee
Q psy5844 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAF 189 (442)
Q Consensus 110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~f 189 (442)
++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++++++.|+.||+++.|.|
T Consensus 160 ~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~F 239 (503)
T 1a4s_A 160 AGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSF 239 (503)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEE
T ss_pred EEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999985578899999999999999
Q ss_pred cCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHH
Q psy5844 190 TGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSG 269 (442)
Q Consensus 190 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~ 269 (442)
|||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+
T Consensus 240 TGS~~~G~~i~~~aa-~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 318 (503)
T 1a4s_A 240 TGSVPTGKKVMEMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVV 318 (503)
T ss_dssp ESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHH
T ss_pred eCCHHHHHHHHHHhh-hcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHH
Confidence 999999999999998 5899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc--C----CCCcccccceeccCcchhHHHH
Q psy5844 270 ERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA--G----DKGFYVQPTVFANVRDDMKIAR 343 (442)
Q Consensus 270 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~--~----~~g~~v~pti~~~~~~~~~~~~ 343 (442)
++++++++|+|.|+++++||+++..+++++.+++++++.+|+++++||... + ..|+|++|||+.++.++|.+++
T Consensus 319 ~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~ 398 (503)
T 1a4s_A 319 KRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVK 398 (503)
T ss_dssp HHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHH
T ss_pred HHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHh
Confidence 999999999999999999999999999999999999999999999999764 2 3589999999999999999999
Q ss_pred HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844 344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE 404 (442)
Q Consensus 344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~ 404 (442)
+|+||||++++.|++++|+|+++|+.+|||+++|||+|.+++.++++++++|.|+||+...
T Consensus 399 eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~ 459 (503)
T 1a4s_A 399 EEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSI 459 (503)
T ss_dssp SCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCC
T ss_pred ccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCC
Confidence 9999999999999999999999999999999999999999999999999999999998653
No 13
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=1.8e-76 Score=610.53 Aligned_cols=373 Identities=45% Similarity=0.809 Sum_probs=345.4
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhc-hhHHHHHHHHHHHHHHhHhhhcCccccc----CCCcceEEEee
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSY-SVDVEYSLRTLRYYAGFADKIHGKTIPI----NGDFFAYTRHE 104 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~-~~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 104 (442)
.|..+++.......+.++.+++++++|+|||+.++. . |+..+++.++|++.++++..++.++. +.+...++.++
T Consensus 99 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 177 (517)
T 2o2p_A 99 DRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKT-HVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKE 177 (517)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHT-TTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEec
Confidence 344455555454455667779999999999999998 6 99999999999999888776654443 12335789999
Q ss_pred ccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCC
Q psy5844 105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPG 183 (442)
Q Consensus 105 P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~ 183 (442)
|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|.+ +.++.|+.||+
T Consensus 178 P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~ 257 (517)
T 2o2p_A 178 PVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPD 257 (517)
T ss_dssp ECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTT
T ss_pred CCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999977 88999999999
Q ss_pred ccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHH
Q psy5844 184 VDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDE 263 (442)
Q Consensus 184 v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~ 263 (442)
++.|.||||+.+|+.|++.++.+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+
T Consensus 258 v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~ 337 (517)
T 2o2p_A 258 VRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQ 337 (517)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHH
T ss_pred CCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHH
Confidence 99999999999999999987723789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHH
Q psy5844 264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAR 343 (442)
Q Consensus 264 f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~ 343 (442)
|+++|+++++++++|||+|+++++||+++..+++++.++|++++++|+++++||...+..|+|++|||+.++.++|.+++
T Consensus 338 f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~ 417 (517)
T 2o2p_A 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAK 417 (517)
T ss_dssp HHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGT
T ss_pred HHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhh
Confidence 99999999999999999999999999999999999999999999999999999976544689999999999999999999
Q ss_pred HhhcCCcccccccCC--HHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 344 EEIFGPVQQLIRFSS--IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 344 ~e~fgPvl~v~~~~~--~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
+|+||||++++.|++ ++|+|+++|+++|||+++|||+|.+++.++++++++|.|+||+..
T Consensus 418 eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~ 479 (517)
T 2o2p_A 418 EESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYN 479 (517)
T ss_dssp SCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSS
T ss_pred ccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCC
Confidence 999999999999999 999999999999999999999999999999999999999999864
No 14
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=1.8e-75 Score=605.85 Aligned_cols=370 Identities=35% Similarity=0.565 Sum_probs=344.8
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHh-HhhhcCcccccCCCcceEEEeeccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGF-ADKIHGKTIPINGDFFAYTRHEPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~Gv 108 (442)
.|..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++.+ .+...++..+...+...++.++|+||
T Consensus 97 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 175 (538)
T 3qan_A 97 ERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGV 175 (538)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcE
Confidence 3444444444444555778899999999999999999 999999999999988 56665655544356778999999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV 187 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v 187 (442)
|++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||+++.|
T Consensus 176 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I 255 (538)
T 3qan_A 176 TVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLI 255 (538)
T ss_dssp EEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEE
T ss_pred EEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEE
Confidence 9999999999999999999999999999999999999999999999999999999999999977 899999999999999
Q ss_pred eecCCHHHHHHHHhhccCCC------CceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccH
Q psy5844 188 AFTGSTEVGKLVQQGSGASN------LKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIY 261 (442)
Q Consensus 188 ~ftGs~~~~~~i~~~~~~~~------~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~ 261 (442)
.||||+.+|+.|++.++ .+ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++
T Consensus 256 ~FTGS~~~G~~i~~~aa-~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~ 334 (538)
T 3qan_A 256 TFTGSKDVGVRLYERAA-VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVY 334 (538)
T ss_dssp EEESCHHHHHHHHHHHT-SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTH
T ss_pred EEECCHHHHHHHHHHhh-hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHH
Confidence 99999999999999988 46 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHH
Q psy5844 262 DEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKI 341 (442)
Q Consensus 262 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~ 341 (442)
|+|+++|+++++++++|+|.|+++++||+++..+++++.++|++++.+| ++++||...+..|+|++|||+.++.+++.+
T Consensus 335 d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i 413 (538)
T 3qan_A 335 DEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVI 413 (538)
T ss_dssp HHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHH
T ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChh
Confidence 9999999999999999999999999999999999999999999999999 999999875447999999999999999999
Q ss_pred HHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCC
Q psy5844 342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSS 402 (442)
Q Consensus 342 ~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~ 402 (442)
+++|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+.
T Consensus 414 ~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~ 474 (538)
T 3qan_A 414 MQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRN 474 (538)
T ss_dssp HHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSC
T ss_pred hCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999943
No 15
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4e-76 Score=605.91 Aligned_cols=372 Identities=40% Similarity=0.606 Sum_probs=345.7
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhc-hhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSY-SVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv 108 (442)
.+..+++.......+.++.+++++++|+|||+.++. . |+..+++.+++++.++++..++..+.+.+...++.++|+||
T Consensus 71 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GV 149 (495)
T 3b4w_A 71 ERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETM-HWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGV 149 (495)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHT-TTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCce
Confidence 344555555455555677779999999999999998 6 99999999999999888777765443334467899999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEe
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVA 188 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~ 188 (442)
|++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|+.+.++.|+.||+++.|.
T Consensus 150 v~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~ 229 (495)
T 3b4w_A 150 VGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFT 229 (495)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEE
T ss_pred EEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999338999999999999999
Q ss_pred ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844 189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS 268 (442)
Q Consensus 189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l 268 (442)
||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 230 FTGS~~~G~~i~~~aa-~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 308 (495)
T 3b4w_A 230 FTGSSAVGREVGRRAA-EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAV 308 (495)
T ss_dssp EESCHHHHHHHHHHHH-HTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHH
T ss_pred EeCCHHHHHHHHHHhh-hcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHH
Confidence 9999999999999888 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC--CCCcccccceeccCcchhHHHHHhh
Q psy5844 269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKIAREEI 346 (442)
Q Consensus 269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~v~pti~~~~~~~~~~~~~e~ 346 (442)
+++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.++.+++.++++|+
T Consensus 309 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 388 (495)
T 3b4w_A 309 TNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEI 388 (495)
T ss_dssp HHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCC
T ss_pred HHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhccc
Confidence 99999999999999999999999999999999999999999999999997643 3689999999999999999999999
Q ss_pred cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
||||++++.|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||+..
T Consensus 389 FGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~ 445 (495)
T 3b4w_A 389 FGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA 445 (495)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC
T ss_pred ccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC
Confidence 999999999999999999999999999999999999999999999999999999864
No 16
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=7.6e-76 Score=604.66 Aligned_cols=374 Identities=34% Similarity=0.571 Sum_probs=346.5
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv 108 (442)
.+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++..+++..+...+.. .+...++.++|+||
T Consensus 73 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 151 (497)
T 3k2w_A 73 TRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGV 151 (497)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCce
Confidence 3444555554544556777899999999999999997 999999999999998887766544432 56678999999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV 187 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v 187 (442)
|++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++ +.++.|+.||++|.|
T Consensus 152 V~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I 231 (497)
T 3k2w_A 152 VVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMI 231 (497)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEE
T ss_pred EEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEE
Confidence 9999999999999999999999999999999999999999999999999999999999999977 899999999999999
Q ss_pred eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844 188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267 (442)
Q Consensus 188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~ 267 (442)
.||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 232 ~fTGS~~~G~~i~~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 310 (497)
T 3k2w_A 232 TMTGSTVAGKQIYKTSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAK 310 (497)
T ss_dssp EEESCHHHHHHHHHHHT-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHH
T ss_pred EEECcHHHHHHHHHHhh-hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHH
Confidence 99999999999999998 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcc--cCC--CCcccccceeccCcchhHHHH
Q psy5844 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGR--AGD--KGFYVQPTVFANVRDDMKIAR 343 (442)
Q Consensus 268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~--~~~--~g~~v~pti~~~~~~~~~~~~ 343 (442)
|+++++++++|+|.|+++++||+++..+++++.++|++++.+|+++++||.. .+. .|+|+.|||+.++.+++.+++
T Consensus 311 l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~ 390 (497)
T 3k2w_A 311 FLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVH 390 (497)
T ss_dssp HHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHH
T ss_pred HHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhc
Confidence 9999999999999999999999999999999999999999999999999973 222 689999999999999999999
Q ss_pred HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844 344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE 405 (442)
Q Consensus 344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~ 405 (442)
+|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+....
T Consensus 391 eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~ 452 (497)
T 3k2w_A 391 EETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGE 452 (497)
T ss_dssp SCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC
T ss_pred CCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999997643
No 17
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.7e-75 Score=602.53 Aligned_cols=371 Identities=41% Similarity=0.710 Sum_probs=345.2
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc-CCCcceEEEeeccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gv 108 (442)
.+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++.++++..++..+. ..+...++.++|+||
T Consensus 87 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV 165 (515)
T 2d4e_A 87 ERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVRA-QVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGP 165 (515)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCc
Confidence 3444555554544556777799999999999999996 99999999999999888776665444 245567899999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV 187 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v 187 (442)
|++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||+++.|
T Consensus 166 v~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I 245 (515)
T 2d4e_A 166 VGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLL 245 (515)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEE
T ss_pred eEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEE
Confidence 9999999999999999999999999999999999999999999999999999999999999976 889999999999999
Q ss_pred eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844 188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267 (442)
Q Consensus 188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~ 267 (442)
.||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 246 ~FTGS~~~G~~I~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 324 (515)
T 2d4e_A 246 TLTGETETGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGK 324 (515)
T ss_dssp EEESCHHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHH
T ss_pred EEeCcHHHHHHHHHHHh-hcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHH
Confidence 99999999999999998 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC--------CCCcccccceeccCcchh
Q psy5844 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--------DKGFYVQPTVFANVRDDM 339 (442)
Q Consensus 268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--------~~g~~v~pti~~~~~~~~ 339 (442)
|.++++++++|+|.|+++++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+ .++|
T Consensus 325 l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~ 403 (515)
T 2d4e_A 325 VVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHM 403 (515)
T ss_dssp HHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTS
T ss_pred HHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCC
Confidence 999999999999999999999999999999999999999999999999997643 2689999999999 9999
Q ss_pred HHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 340 KIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 340 ~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
.++++|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus 404 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~ 467 (515)
T 2d4e_A 404 KIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHN 467 (515)
T ss_dssp HHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSC
T ss_pred hhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999864
No 18
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.7e-75 Score=603.70 Aligned_cols=372 Identities=28% Similarity=0.443 Sum_probs=344.8
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv 108 (442)
.+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++.+.+...+...+.. .+...++.++|+||
T Consensus 87 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 165 (521)
T 4e4g_A 87 RRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGI 165 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcE
Confidence 3444444444444556677799999999999999998 999999999999987776655433222 45678999999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEe
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVA 188 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~ 188 (442)
|++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|+++.++.|+.||+++.|.
T Consensus 166 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~ 245 (521)
T 4e4g_A 166 GAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVS 245 (521)
T ss_dssp EEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEE
T ss_pred EEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999767779999999999999
Q ss_pred ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCc-cHHHHHHH
Q psy5844 189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDT-IYDEFVAR 267 (442)
Q Consensus 189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~-~~~~f~~~ 267 (442)
||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ ++|+|+++
T Consensus 246 FTGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~ 324 (521)
T 4e4g_A 246 FVGSTPIARYVYGTAA-MNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDK 324 (521)
T ss_dssp EESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHh-hcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHH
Confidence 9999999999999888 589999999999999999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc----CCCCcccccceeccCcchhHHHH
Q psy5844 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA----GDKGFYVQPTVFANVRDDMKIAR 343 (442)
Q Consensus 268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~----~~~g~~v~pti~~~~~~~~~~~~ 343 (442)
|+++++++++|+|.|+++++||+++..+++++.++|++++.+|+++++||.+. ...|+|+.|||+.++.+++.+++
T Consensus 325 l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~ 404 (521)
T 4e4g_A 325 LVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYK 404 (521)
T ss_dssp HHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHH
T ss_pred HHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhc
Confidence 99999999999999999999999999999999999999999999999999752 24789999999999999999999
Q ss_pred HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
+|+||||++++.|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||+..
T Consensus 405 eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~ 464 (521)
T 4e4g_A 405 TEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPI 464 (521)
T ss_dssp SCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSS
T ss_pred CcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCC
Confidence 999999999999999999999999999999999999999999999999999999999875
No 19
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=2.5e-75 Score=599.39 Aligned_cols=373 Identities=38% Similarity=0.642 Sum_probs=347.7
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv 108 (442)
.+.++++.......+.++.+++++++|+|||..+++. |+..+++.++|++..+.+..+...+.. .+...+++++|+||
T Consensus 70 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 148 (481)
T 3jz4_A 70 ERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGV 148 (481)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccE
Confidence 3444555544444555677799999999999999998 999999999999988776655544432 45678899999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV 187 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v 187 (442)
|++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ +.++.|+.||+++.|
T Consensus 149 v~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I 228 (481)
T 3jz4_A 149 TAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKL 228 (481)
T ss_dssp EEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEE
T ss_pred EEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEE
Confidence 9999999999999999999999999999999999999999999999999999999999999976 899999999999999
Q ss_pred eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844 188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267 (442)
Q Consensus 188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~ 267 (442)
.||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 229 ~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 307 (481)
T 3jz4_A 229 SFTGSTEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEK 307 (481)
T ss_dssp EEESCHHHHHHHHHHHT-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHH
T ss_pred EEECCHHHHHHHHHHHh-hcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHH
Confidence 99999999999999988 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhc
Q psy5844 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF 347 (442)
Q Consensus 268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~f 347 (442)
|+++++++++|+|.|+++++||+++..+++++.+++++++.+|+++++||...+..|+|+.|||+.++.+++.++++|+|
T Consensus 308 l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiF 387 (481)
T 3jz4_A 308 LQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETF 387 (481)
T ss_dssp HHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCC
T ss_pred HHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCccccccccc
Confidence 99999999999999999999999999999999999999999999999999875556899999999999999999999999
Q ss_pred CCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE 404 (442)
Q Consensus 348 gPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~ 404 (442)
|||++++.|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||++..
T Consensus 388 GPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~ 444 (481)
T 3jz4_A 388 GPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGII 444 (481)
T ss_dssp SSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCC
T ss_pred CceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCC
Confidence 999999999999999999999999999999999999999999999999999998753
No 20
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=2.9e-75 Score=598.59 Aligned_cols=373 Identities=34% Similarity=0.579 Sum_probs=346.6
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv 108 (442)
.+..+++.......+.++.+++++++|+|||+.++.. |+..+++.+++++..+++..+...+.. .+...++.++|+||
T Consensus 67 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 145 (479)
T 2imp_A 67 ERASWLRKISAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGV 145 (479)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccce
Confidence 4445555555555556777899999999999999997 999999999999988877666544432 34567899999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV 187 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v 187 (442)
|++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++ ++++.|+.||+++.|
T Consensus 146 v~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V 225 (479)
T 2imp_A 146 TTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMV 225 (479)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEE
T ss_pred EEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEE
Confidence 9999999999999999999999999999999999999999999999999999999999999976 789999999999999
Q ss_pred eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844 188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267 (442)
Q Consensus 188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~ 267 (442)
.||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 226 ~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~ 304 (479)
T 2imp_A 226 SMTGSVSAGEKIMATAA-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304 (479)
T ss_dssp EEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHH
T ss_pred EEeCCHHHHHHHHHHHh-ccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHH
Confidence 99999999999999988 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCC-CCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhh
Q psy5844 268 SGERAKRRTVGDPFD-LNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI 346 (442)
Q Consensus 268 l~~~~~~~~~g~p~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~ 346 (442)
|.++++++++|+|.| +++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.++.+++.++++|+
T Consensus 305 l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEi 384 (479)
T 2imp_A 305 LGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEET 384 (479)
T ss_dssp HHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCC
T ss_pred HHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCcc
Confidence 999999999999999 9999999999999999999999999999999999976434689999999999999999999999
Q ss_pred cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844 347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE 404 (442)
Q Consensus 347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~ 404 (442)
||||+++..|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus 385 FGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~ 442 (479)
T 2imp_A 385 FGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENF 442 (479)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCC
T ss_pred CCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCC
Confidence 9999999999999999999999999999999999999999999999999999998654
No 21
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.3e-75 Score=601.14 Aligned_cols=368 Identities=45% Similarity=0.765 Sum_probs=342.6
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhh----hcCcccccCCCcceEEEeec
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADK----IHGKTIPINGDFFAYTRHEP 105 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P 105 (442)
.+..+++.......+.++.+++++++|+|||..++ |+..+++.+++++.++++ +.++..+...+. .+++++|
T Consensus 75 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P 150 (517)
T 3r31_A 75 ARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVP 150 (517)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcC
Confidence 34444444444445556777999999999999998 999999999999998877 666655444455 8999999
Q ss_pred cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCcc
Q psy5844 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVD 185 (442)
Q Consensus 106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~ 185 (442)
+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|+.+.++.|+.||++|
T Consensus 151 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd 230 (517)
T 3r31_A 151 LGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVA 230 (517)
T ss_dssp CSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEE
T ss_pred ccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999448999999999999
Q ss_pred EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844 186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV 265 (442)
Q Consensus 186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~ 265 (442)
.|+||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus 231 ~I~FTGS~~~G~~i~~~aa-~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~ 309 (517)
T 3r31_A 231 KVSLTGSVPTGRKVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFL 309 (517)
T ss_dssp EEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHH
T ss_pred EEeccCCHHHHHHHHHHhh-cCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHH
Confidence 9999999999999999988 589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcc-cC---CCCcccccceeccCcchhHH
Q psy5844 266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGR-AG---DKGFYVQPTVFANVRDDMKI 341 (442)
Q Consensus 266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~-~~---~~g~~v~pti~~~~~~~~~~ 341 (442)
++|+++++++++|+|.|+++++||+++..+++++.++|++++++|+++++|| . .+ ..|+|+.|||+.++.+++.+
T Consensus 310 ~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i 388 (517)
T 3r31_A 310 ENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTI 388 (517)
T ss_dssp HHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHH
T ss_pred HHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999 4 21 37899999999999999999
Q ss_pred HHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 342 ~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
+++|+||||+++..|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus 389 ~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~ 450 (517)
T 3r31_A 389 AREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYN 450 (517)
T ss_dssp HHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCC
T ss_pred ccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCC
Confidence 99999999999999999999999999999999999999999999999999999999999865
No 22
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=6.3e-75 Score=596.54 Aligned_cols=371 Identities=36% Similarity=0.626 Sum_probs=344.8
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv 108 (442)
.+..+++.......+.++.+++++++|+|||..++...|+..+++.+++++.++++..++..+.+ .+...++.++|+||
T Consensus 83 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV 162 (495)
T 1wnd_A 83 VRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGV 162 (495)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCe
Confidence 44455555555555667778999999999999999765999999999999998877766544433 34567899999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV 187 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v 187 (442)
|++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++ +.++.|+.||++|.|
T Consensus 163 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I 241 (495)
T 1wnd_A 163 VASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMV 241 (495)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEE
T ss_pred EEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEE
Confidence 99999999999999999999999999999999999999999999999999 9999999999966 889999999999999
Q ss_pred eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844 188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267 (442)
Q Consensus 188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~ 267 (442)
.||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 242 ~FTGS~~~G~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 320 (495)
T 1wnd_A 242 SLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEK 320 (495)
T ss_dssp EEESCHHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHH
T ss_pred EEECcHHHHHHHHHHHH-hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHH
Confidence 99999999999999988 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcC-CEEEeCCc-ccCCCCcccccceeccCcchhHHHHHh
Q psy5844 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQG-AQLVAGGG-RAGDKGFYVQPTVFANVRDDMKIAREE 345 (442)
Q Consensus 268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~G-a~~~~gg~-~~~~~g~~v~pti~~~~~~~~~~~~~e 345 (442)
|+++++++++|+|.|+++++|||++..+++++.++|++++++| +++++||. .. +.|+|+.|||+.++.++|.++++|
T Consensus 321 l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eE 399 (495)
T 1wnd_A 321 LGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKE 399 (495)
T ss_dssp HHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSC
T ss_pred HHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhcc
Confidence 9999999999999999999999999999999999999999999 99999997 43 368999999999999999999999
Q ss_pred hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
+||||+++..|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||+..
T Consensus 400 iFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~ 457 (495)
T 1wnd_A 400 VFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHF 457 (495)
T ss_dssp CCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCC
T ss_pred ccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999999864
No 23
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=7.9e-75 Score=596.08 Aligned_cols=369 Identities=34% Similarity=0.584 Sum_probs=339.1
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEE-eeccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTR-HEPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gv 108 (442)
.+..+++.......+..+.+++++++|+|||+.+++..|+..+++.+++++............ ..+...++. ++|+||
T Consensus 86 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GV 164 (497)
T 3i44_A 86 ERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGV 164 (497)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceE
Confidence 444555555454456677789999999999999999339999999999998876554322111 124556778 999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV 187 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v 187 (442)
|++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||+++.|
T Consensus 165 v~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I 244 (497)
T 3i44_A 165 VGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMI 244 (497)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEE
T ss_pred EEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEE
Confidence 9999999999999999999999999999999999999999999999999999999999999977 899999999999999
Q ss_pred eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844 188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267 (442)
Q Consensus 188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~ 267 (442)
+||||+.+|+.|++.++ +++||+++|+|||||+||++||| +.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 245 ~FTGS~~~G~~i~~~aa-~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~ 322 (497)
T 3i44_A 245 SFTGSTRAGKDISKNAS-NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKT 322 (497)
T ss_dssp EEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHH
T ss_pred EEeCcHHHHHHHHHHHh-hcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHH
Confidence 99999999999999998 68999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCc-ccC--CCCcccccceeccCcchhHHHHH
Q psy5844 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGG-RAG--DKGFYVQPTVFANVRDDMKIARE 344 (442)
Q Consensus 268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~-~~~--~~g~~v~pti~~~~~~~~~~~~~ 344 (442)
|+++++++++|||.|+++++||+++..+++++.++|++++.+|+++++||. ..+ ..|+|++|||+.++.+++.++++
T Consensus 323 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~e 402 (497)
T 3i44_A 323 AKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFRE 402 (497)
T ss_dssp HHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHS
T ss_pred HHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcC
Confidence 999999999999999999999999999999999999999999999999994 322 36899999999999999999999
Q ss_pred hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeC
Q psy5844 345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFS 401 (442)
Q Consensus 345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~ 401 (442)
|+||||++++.|++++|+|+++|+.+|||+++|||+|.+++.++++++++|.|+||.
T Consensus 403 EiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~ 459 (497)
T 3i44_A 403 EIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG 459 (497)
T ss_dssp CCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT
T ss_pred cccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC
Confidence 999999999999999999999999999999999999999999999999999999995
No 24
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=2.4e-75 Score=600.99 Aligned_cols=367 Identities=35% Similarity=0.542 Sum_probs=341.8
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC--C----CcceEEEe
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN--G----DFFAYTRH 103 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~ 103 (442)
.|..+++.......+.++.+++++++|+|||..+++. |+..+++.+++++..+++..++..+.. . +...++.+
T Consensus 72 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 150 (505)
T 3prl_A 72 ERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVER 150 (505)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEE
Confidence 3444444444444556777899999999999999998 999999999999998877666544332 2 45678999
Q ss_pred eccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCC
Q psy5844 104 EPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHP 182 (442)
Q Consensus 104 ~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~ 182 (442)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++ ++++.|+.||
T Consensus 151 ~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p 230 (505)
T 3prl_A 151 EPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHP 230 (505)
T ss_dssp EECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCT
T ss_pred cCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999976 8999999999
Q ss_pred CccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHH
Q psy5844 183 GVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD 262 (442)
Q Consensus 183 ~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~ 262 (442)
++|.|.||||+.+|+.|++.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|
T Consensus 231 ~vd~I~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d 307 (505)
T 3prl_A 231 GIDMITFTGGTTTGERISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVAD 307 (505)
T ss_dssp TCCEEEEESCHHHHHHHHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHH
T ss_pred CCCEEEEeCCHHHHHHHHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHH
Confidence 9999999999999999999876 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHH
Q psy5844 263 EFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIA 342 (442)
Q Consensus 263 ~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~ 342 (442)
+|+++|+++++++++|||. +++++||+++..+++++.++|++++.+|+++++||.. .|+|+.|||+.++.+++.++
T Consensus 308 ~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~ 383 (505)
T 3prl_A 308 QLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVA 383 (505)
T ss_dssp HHHHHHHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGG
T ss_pred HHHHHHHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhh
Confidence 9999999999999999999 9999999999999999999999999999999999974 68999999999999999999
Q ss_pred HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844 343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE 404 (442)
Q Consensus 343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~ 404 (442)
++|+||||++++.|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||+...
T Consensus 384 ~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~ 445 (505)
T 3prl_A 384 WEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTE 445 (505)
T ss_dssp TSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCC
T ss_pred cCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999764
No 25
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=5.8e-75 Score=596.66 Aligned_cols=372 Identities=35% Similarity=0.577 Sum_probs=345.9
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv 108 (442)
.+..+++.......+.++.+++++++|+|||..++.. |+..+++.+++++.++++..++..+.. .+...++.++|+||
T Consensus 71 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV 149 (487)
T 2w8n_A 71 ERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGV 149 (487)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceE
Confidence 3444555554545556777799999999999999998 999999999999998877666554432 45567899999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeec---CCc-cchhhhhcCCCc
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP---GYG-DAGAALVQHPGV 184 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~---~~~-~~~~~l~~~~~v 184 (442)
|++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++ |++ +.++.|+.||++
T Consensus 150 v~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v 229 (487)
T 2w8n_A 150 AAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLV 229 (487)
T ss_dssp EEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTE
T ss_pred EEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999 866 789999999999
Q ss_pred cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844 185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF 264 (442)
Q Consensus 185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f 264 (442)
+.|.||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|
T Consensus 230 ~~V~fTGS~~~g~~i~~~aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 308 (487)
T 2w8n_A 230 SKISFTGSTTTGKILLHHAA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAF 308 (487)
T ss_dssp EEEEEEECHHHHHHHHHHHH-TTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHH
T ss_pred CEEEEeCCHHHHHHHHHHHh-ccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHH
Confidence 99999999999999999988 68999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-cccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCc-ccccceeccCcchhHHH
Q psy5844 265 VARSGERAKR-RTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGF-YVQPTVFANVRDDMKIA 342 (442)
Q Consensus 265 ~~~l~~~~~~-~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~-~v~pti~~~~~~~~~~~ 342 (442)
+++|++++++ +++|+|.|+++++||+++..+++++.++|++++++|+++++||... +.|+ |++|||+.++.+++.++
T Consensus 309 ~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~ 387 (487)
T 2w8n_A 309 VKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCT 387 (487)
T ss_dssp HHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTT
T ss_pred HHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhh
Confidence 9999999999 9999999999999999999999999999999999999999999764 3588 99999999999999999
Q ss_pred HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844 343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE 404 (442)
Q Consensus 343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~ 404 (442)
++|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|++|+...
T Consensus 388 ~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~ 449 (487)
T 2w8n_A 388 HEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLI 449 (487)
T ss_dssp CTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCC
T ss_pred hcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999998653
No 26
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=2.3e-74 Score=590.09 Aligned_cols=372 Identities=28% Similarity=0.442 Sum_probs=347.2
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 109 (442)
.+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++..+++..+.......+...+++++|+|||
T Consensus 52 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 130 (462)
T 3etf_A 52 QRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVI 130 (462)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEE
Confidence 4445555555555566788899999999999999998 999999999999998877665442111455688999999999
Q ss_pred EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEee
Q psy5844 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAF 189 (442)
Q Consensus 110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~f 189 (442)
++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|+++.+..|+.||+++.|+|
T Consensus 131 ~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~f 210 (462)
T 3etf_A 131 LAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTV 210 (462)
T ss_dssp EEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEE
T ss_pred EEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999996688899999999999999
Q ss_pred cCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHH
Q psy5844 190 TGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSG 269 (442)
Q Consensus 190 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~ 269 (442)
|||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.
T Consensus 211 TGS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 289 (462)
T 3etf_A 211 TGSVRAGAAIGAQAG-AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFV 289 (462)
T ss_dssp ESCHHHHHHHHHHHH-HTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHH
T ss_pred eCCchHHHHHHHHHh-ccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHH
Confidence 999999999999988 5899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcCC
Q psy5844 270 ERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGP 349 (442)
Q Consensus 270 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgP 349 (442)
++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||...+..|+|++|||+.++.+++.++++|+|||
T Consensus 290 ~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGP 369 (462)
T 3etf_A 290 AAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGP 369 (462)
T ss_dssp HHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSS
T ss_pred HHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCc
Confidence 99999999999999999999999999999999999999999999999986666899999999999999999999999999
Q ss_pred cccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 350 VQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 350 vl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
|++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|++|+..
T Consensus 370 Vl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~ 423 (462)
T 3etf_A 370 VAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYS 423 (462)
T ss_dssp EEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCC
T ss_pred EEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCC
Confidence 999999999999999999999999999999999999999999999999999875
No 27
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=4.8e-74 Score=591.53 Aligned_cols=373 Identities=45% Similarity=0.743 Sum_probs=347.3
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 109 (442)
.+..+++.......+.++.+++++++|+|||..+++..|+..+++.+++++.++++..+...+.+.+...+++++|+|||
T Consensus 67 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 146 (490)
T 2ve5_A 67 QRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVV 146 (490)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEE
Confidence 34444444444445556777999999999999999866999999999999998877766554444567789999999999
Q ss_pred EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA 188 (442)
Q Consensus 110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~ 188 (442)
++|+|||||+...++++++||++||+||+|||+.+|.++..|++++.++|+|+|++++++|++ +.++.|+.||+++.|+
T Consensus 147 ~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~ 226 (490)
T 2ve5_A 147 AGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKIS 226 (490)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEE
T ss_pred EEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEE
Confidence 999999999999999999999999999999999999999999999999999999999999966 8999999999999999
Q ss_pred ecCCHHHHHHHHhhc-cCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844 189 FTGSTEVGKLVQQGS-GASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267 (442)
Q Consensus 189 ftGs~~~~~~i~~~~-~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~ 267 (442)
||||+.+|+.|++.+ + .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 227 fTGS~~~g~~i~~~a~a-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 305 (490)
T 2ve5_A 227 FTGGTSTGKKVMASASS-SSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 305 (490)
T ss_dssp EESCHHHHHHHHHHHHH-HHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHH
T ss_pred EeCCcHHHHHHHHhchh-ccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHH
Confidence 999999999999988 6 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC----CCCcccccceeccCcchhHHHH
Q psy5844 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKIAR 343 (442)
Q Consensus 268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~~~~~~~ 343 (442)
|.++++++++|+|.|+++++||+++..+++++.+++++++.+|+++++||.... ..|+|++|||+.++.+++.+++
T Consensus 306 l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~ 385 (490)
T 2ve5_A 306 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVR 385 (490)
T ss_dssp HHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHH
T ss_pred HHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCcccc
Confidence 999999999999999999999999999999999999999999999999997632 3689999999999999999999
Q ss_pred HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
+|+||||++++.|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||+..
T Consensus 386 eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~ 445 (490)
T 2ve5_A 386 EEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWG 445 (490)
T ss_dssp SCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCS
T ss_pred ceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC
Confidence 999999999999999999999999999999999999999999999999999999999865
No 28
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=1.5e-74 Score=597.57 Aligned_cols=371 Identities=33% Similarity=0.542 Sum_probs=342.3
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccc-cC-CCcceEEEeeccc
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP-IN-GDFFAYTRHEPVG 107 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~P~G 107 (442)
.+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++..+++..+...+ .. .+...++.++|+|
T Consensus 97 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~G 175 (516)
T 1uzb_A 97 DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASA-DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLG 175 (516)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccc
Confidence 3444555554544555677799999999999999997 9999999999999988877665432 11 3556789999999
Q ss_pred eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccE
Q psy5844 108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDK 186 (442)
Q Consensus 108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~ 186 (442)
||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++ +.++.|+.||+++.
T Consensus 176 Vv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~ 255 (516)
T 1uzb_A 176 AGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRF 255 (516)
T ss_dssp EEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCE
T ss_pred eEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCE
Confidence 99999999999999999999999999999999999999999999999999999999999999966 88999999999999
Q ss_pred EeecCCHHHHHHHHhhccC-----CCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccH
Q psy5844 187 VAFTGSTEVGKLVQQGSGA-----SNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIY 261 (442)
Q Consensus 187 v~ftGs~~~~~~i~~~~~~-----~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~ 261 (442)
|.||||+.+|+.|++.+++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++
T Consensus 256 I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~ 335 (516)
T 1uzb_A 256 INFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAY 335 (516)
T ss_dssp EEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHH
T ss_pred EEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHH
Confidence 9999999999999998872 47899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHH
Q psy5844 262 DEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKI 341 (442)
Q Consensus 262 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~ 341 (442)
|+|+++|+++++++++|+| ++++++|||++..+++++.++|++++.+| ++++||...+..|+|+.|||+.++.++|.+
T Consensus 336 d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i 413 (516)
T 1uzb_A 336 EPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARI 413 (516)
T ss_dssp HHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGG
T ss_pred HHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHh
Confidence 9999999999999999999 99999999999999999999999999888 899998753346899999999999999999
Q ss_pred HHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 342 ~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
+++|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus 414 ~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~ 475 (516)
T 1uzb_A 414 AQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKI 475 (516)
T ss_dssp GTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCS
T ss_pred hhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999854
No 29
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.2e-74 Score=595.68 Aligned_cols=367 Identities=31% Similarity=0.488 Sum_probs=342.2
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc---CC--CcceEEEee
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI---NG--DFFAYTRHE 104 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~ 104 (442)
.+..+++.......+.++.+++++++|+|||..++.. |+..+++.+++++.++++..++..+. +. +...++.++
T Consensus 78 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 156 (501)
T 1uxt_A 78 ERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRRE 156 (501)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEe
Confidence 4445555555555566778899999999999999997 99999999999999887776665443 22 336789999
Q ss_pred ccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCc
Q psy5844 105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGV 184 (442)
Q Consensus 105 P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v 184 (442)
|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|+++.++.|+.||++
T Consensus 157 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v 236 (501)
T 1uxt_A 157 PLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRV 236 (501)
T ss_dssp ECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTC
T ss_pred eccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999866788999999999
Q ss_pred cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844 185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF 264 (442)
Q Consensus 185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f 264 (442)
|.|.||||+.+|+.|++.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|
T Consensus 237 d~I~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 313 (501)
T 1uxt_A 237 AAVSFTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKL 313 (501)
T ss_dssp CEEEEESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHH
T ss_pred CEEEEeCcHHHHHHHHHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHH
Confidence 99999999999999999876 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCC-cccccceeccCc---chhH
Q psy5844 265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKG-FYVQPTVFANVR---DDMK 340 (442)
Q Consensus 265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g-~~v~pti~~~~~---~~~~ 340 (442)
+++|.++++++++|||.|+++++||+++..+++++.+++++++.+|+++++||.. .| +|++|||+.++. ++|.
T Consensus 314 ~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~ 390 (501)
T 1uxt_A 314 VEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMV 390 (501)
T ss_dssp HHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSH
T ss_pred HHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCH
Confidence 9999999999999999999999999999999999999999999999999999875 57 999999999999 9999
Q ss_pred HHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 341 IAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 341 ~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
++++|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+.+
T Consensus 391 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~ 453 (501)
T 1uxt_A 391 LYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMP 453 (501)
T ss_dssp HHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCC
T ss_pred HHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCC
Confidence 999999999999999999999999999999999999999999999999999999999999873
No 30
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=1.5e-74 Score=592.59 Aligned_cols=365 Identities=35% Similarity=0.585 Sum_probs=341.9
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 109 (442)
.|..+++.......+.++.+++++++|+|||..+++. |+..+++.+++++.++++..+...+. .+...++.++|+|||
T Consensus 57 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~P~GVv 134 (486)
T 3pqa_A 57 KRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEVIPS-DDRLIFTRREPVGIV 134 (486)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEEECC-TTEEEEEEEEECSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceecC-CCceeEEEEccccEE
Confidence 3444555554545566788899999999999999998 99999999999999988776654443 366789999999999
Q ss_pred EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHh----CCCCCcEEeecCCc-cchhhhhcCCCc
Q psy5844 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA----GIPEGVVNIVPGYG-DAGAALVQHPGV 184 (442)
Q Consensus 110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~a----glp~~~~~~v~~~~-~~~~~l~~~~~v 184 (442)
++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ |+|+|++++++|++ ++++.|+.||++
T Consensus 135 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~v 214 (486)
T 3pqa_A 135 GAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKV 214 (486)
T ss_dssp EEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTC
T ss_pred EEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCc
Confidence 9999999999999999999999999999999999999999999999999 99999999999977 779999999999
Q ss_pred cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844 185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF 264 (442)
Q Consensus 185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f 264 (442)
|.|+||||+.+|+.|++.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|
T Consensus 215 d~V~fTGS~~~g~~i~~~aa---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 291 (486)
T 3pqa_A 215 NMISFTGSSKVGELITKKAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKF 291 (486)
T ss_dssp CEEEEESCHHHHHHHHHHCC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHH
T ss_pred cEEEEECChHHHHHHHHHcC---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHH
Confidence 99999999999999999765 799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHH
Q psy5844 265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE 344 (442)
Q Consensus 265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~ 344 (442)
+++|+++++++++|+|+|+++++||+++..+++++.++|++++.+|+++++||.. .|+|+.|||+ ++.++|.++++
T Consensus 292 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~e 367 (486)
T 3pqa_A 292 IEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKT 367 (486)
T ss_dssp HHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTC
T ss_pred HHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcc
Confidence 9999999999999999999999999999999999999999999999999999975 5799999999 99999999999
Q ss_pred hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844 345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE 404 (442)
Q Consensus 345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~ 404 (442)
|+||||++++.|++ +|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus 368 EiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~ 426 (486)
T 3pqa_A 368 ETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSL 426 (486)
T ss_dssp CCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTT
T ss_pred cccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCC
Confidence 99999999999999 999999999999999999999999999999999999999999864
No 31
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=4.6e-74 Score=591.83 Aligned_cols=372 Identities=31% Similarity=0.466 Sum_probs=341.8
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv 108 (442)
.+..+++.......+.++.+++++++|+|||..++.. |+..+++.+++++.+++++.++..+.. .+...+.+++|+||
T Consensus 82 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV 160 (500)
T 2j6l_A 82 KRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVG-EVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGL 160 (500)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccE
Confidence 4445555555555566777899999999999999977 999999999999988876656543332 34456788999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHH----hCCCCCcEEeecCCccchhhhhcCCCc
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAE----AGIPEGVVNIVPGYGDAGAALVQHPGV 184 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~----aglp~~~~~~v~~~~~~~~~l~~~~~v 184 (442)
|++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+ +|+|+|++|+++|+.++++.|+.||++
T Consensus 161 v~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~v 240 (500)
T 2j6l_A 161 VGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERV 240 (500)
T ss_dssp EEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTC
T ss_pred EEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCc
Confidence 9999999999999999999999999999999999999999999888764 599999999999944889999999999
Q ss_pred cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844 185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF 264 (442)
Q Consensus 185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f 264 (442)
|.|.||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|
T Consensus 241 d~I~FTGS~~~g~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f 319 (500)
T 2j6l_A 241 NLLSFTGSTQVGKQVGLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEV 319 (500)
T ss_dssp SEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHH
T ss_pred CEEEEECCHHHHHHHHHHhc-cCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHH
Confidence 99999999999999999888 58999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHH
Q psy5844 265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE 344 (442)
Q Consensus 265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~ 344 (442)
+++|++.++++++|+|.|+++++|||++..+++++.+++++++++|+++++||...+..|+|++|||+.++.+++.++++
T Consensus 320 ~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~e 399 (500)
T 2j6l_A 320 VNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHT 399 (500)
T ss_dssp HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHS
T ss_pred HHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcC
Confidence 99999999999999999999999999999999999999999999999999999764456899999999999999999999
Q ss_pred hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhc--cccEeeeEEeeCCH
Q psy5844 345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVT--QGLRAGTLIRFSSI 403 (442)
Q Consensus 345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~--~~~~~G~V~vN~~~ 403 (442)
|+||||++++.|++++|+|+++|+.++||+++|||+|.+++.+++ +++++|.|+||+..
T Consensus 400 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~ 460 (500)
T 2j6l_A 400 ETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPT 460 (500)
T ss_dssp CCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCT
T ss_pred cccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCC
Confidence 999999999999999999999999999999999999999999999 77999999999865
No 32
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=4.5e-74 Score=591.03 Aligned_cols=371 Identities=31% Similarity=0.493 Sum_probs=341.3
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC--CCcceEEEeeccc
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN--GDFFAYTRHEPVG 107 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~G 107 (442)
.+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++..+++..+...+.. .+...+++++|+|
T Consensus 67 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~G 145 (485)
T 4dng_A 67 DRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLG 145 (485)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecce
Confidence 3444444444444555777799999999999999999 999999999999998877766544432 4567899999999
Q ss_pred eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHH-HHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCcc
Q psy5844 108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTA-LAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVD 185 (442)
Q Consensus 108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~-~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~ 185 (442)
||++|+|||||+...++++++||++||+||+|||+.+|.++ ..+.++|.++|+|+|++|+++|++ +.++.|+.||+++
T Consensus 146 Vv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~ 225 (485)
T 4dng_A 146 VISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPR 225 (485)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCS
T ss_pred EEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999 999999999999999999999987 7999999999999
Q ss_pred EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844 186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV 265 (442)
Q Consensus 186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~ 265 (442)
.|.||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus 226 ~v~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~ 304 (485)
T 4dng_A 226 LISFTGSTAVGRHIGEIAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFV 304 (485)
T ss_dssp EEEEEECHHHHHHHHHHHH-HHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHH
T ss_pred EEEEECCcHHHHHHHHHHh-hhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHH
Confidence 9999999999999999888 589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHh
Q psy5844 266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE 345 (442)
Q Consensus 266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e 345 (442)
++|.++++++++|+|.|+++++||+++..+++++.+++++++.+|+++++||.. .|+|++|||+.++.+++.++++|
T Consensus 305 ~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE 381 (485)
T 4dng_A 305 EKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTE 381 (485)
T ss_dssp HHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCC
T ss_pred HHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCc
Confidence 999999999999999999999999999999999999999999999999999975 68999999999999999999999
Q ss_pred hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844 346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE 405 (442)
Q Consensus 346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~ 405 (442)
+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|++|++...
T Consensus 382 ~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~ 441 (485)
T 4dng_A 382 LFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVN 441 (485)
T ss_dssp CCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC---
T ss_pred cccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC
Confidence 999999999999999999999999999999999999999999999999999999998643
No 33
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=8.1e-74 Score=591.03 Aligned_cols=370 Identities=34% Similarity=0.524 Sum_probs=342.4
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC--CCcceEEEeeccc
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN--GDFFAYTRHEPVG 107 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~G 107 (442)
.+..+++.......+.++.+++++++|+|||..+++. |+..+++.+++++.++++..+ ..+.. .+...++.++|+|
T Consensus 73 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~G 150 (508)
T 3r64_A 73 ERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKG 150 (508)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecce
Confidence 3444444444444556777899999999999999999 999999999999988876655 43332 4567899999999
Q ss_pred eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHH-HHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCcc
Q psy5844 108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTA-LAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVD 185 (442)
Q Consensus 108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~-~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~ 185 (442)
||++|+|||||+...++++++||++||+||+|||+.+|.++ ..++++|.++|+|+|++++++|++ +.++.|+.||+++
T Consensus 151 Vv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd 230 (508)
T 3r64_A 151 VVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPK 230 (508)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCS
T ss_pred EEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCcc
Confidence 99999999999999999999999999999999999999999 999999999999999999999986 8999999999999
Q ss_pred EEeecCCHHHHHHHHhhccCC--CCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHH
Q psy5844 186 KVAFTGSTEVGKLVQQGSGAS--NLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDE 263 (442)
Q Consensus 186 ~v~ftGs~~~~~~i~~~~~~~--~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~ 263 (442)
.|.||||+.+|+.|++.++ . ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+
T Consensus 231 ~I~fTGS~~~g~~i~~~aa-~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 309 (508)
T 3r64_A 231 LISFTGSTPVGRRVGELAI-NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDE 309 (508)
T ss_dssp EEEEESCHHHHHHHHHHHH-SSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHH
T ss_pred EEEEECCHHHHHHHHHHhh-cccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHH
Confidence 9999999999999999887 5 789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHH
Q psy5844 264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAR 343 (442)
Q Consensus 264 f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~ 343 (442)
|+++|.++++++++|+|.|+++++||+++..+++++.+++++++.+|+++++||.. .|+|+.|||+.++.+++.+++
T Consensus 310 f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~ 386 (508)
T 3r64_A 310 FLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAR 386 (508)
T ss_dssp HHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGT
T ss_pred HHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhc
Confidence 99999999999999999999999999999999999999999999999999999975 689999999999999999999
Q ss_pred HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844 344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE 405 (442)
Q Consensus 344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~ 405 (442)
+|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|++|+....
T Consensus 387 eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~ 448 (508)
T 3r64_A 387 EEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVN 448 (508)
T ss_dssp SCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC----
T ss_pred ccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999998643
No 34
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=2.8e-73 Score=584.09 Aligned_cols=368 Identities=33% Similarity=0.568 Sum_probs=339.4
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 109 (442)
.+.++++.......+.++.+++++++|+|||..+++..|+..+++.+++++..+++..+.. .+...++.++|+|||
T Consensus 68 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~P~GVv 143 (478)
T 3ty7_A 68 ERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE----RRGDDLVVKEAIGVS 143 (478)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE----EETTEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc----CCccceEEecCceEE
Confidence 3444555554444556777899999999999999943499999999999998887765532 123578999999999
Q ss_pred EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA 188 (442)
Q Consensus 110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~ 188 (442)
++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||+++.|.
T Consensus 144 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~ 223 (478)
T 3ty7_A 144 GLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMS 223 (478)
T ss_dssp EEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEE
T ss_pred EEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEE
Confidence 999999999999999999999999999999999999999999999999999999999999977 8999999999999999
Q ss_pred ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844 189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS 268 (442)
Q Consensus 189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l 268 (442)
||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 224 fTGS~~~G~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l 302 (478)
T 3ty7_A 224 FTGSGPTGSKIMEKAA-KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAEL 302 (478)
T ss_dssp ECSCHHHHCC--CSTT-TTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHH
T ss_pred EECcHHHHHHHHHHHH-hcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHH
Confidence 9999999999999888 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc-C--CCCcccccceeccCcchhHHHHHh
Q psy5844 269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA-G--DKGFYVQPTVFANVRDDMKIAREE 345 (442)
Q Consensus 269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-~--~~g~~v~pti~~~~~~~~~~~~~e 345 (442)
.++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||... + ..|+|++|||+.++.+++.++++|
T Consensus 303 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE 382 (478)
T 3ty7_A 303 KEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEE 382 (478)
T ss_dssp HHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSC
T ss_pred HHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCce
Confidence 9999999999999999999999999999999999999999999999999432 2 468999999999999999999999
Q ss_pred hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCC
Q psy5844 346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSS 402 (442)
Q Consensus 346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~ 402 (442)
+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+.
T Consensus 383 ~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~ 439 (478)
T 3ty7_A 383 IFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEA 439 (478)
T ss_dssp CCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETTC
T ss_pred eECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCC
Confidence 999999999999999999999999999999999999999999999999999999984
No 35
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.2e-73 Score=587.33 Aligned_cols=371 Identities=32% Similarity=0.545 Sum_probs=342.9
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccc-cCCCcceEEEeeccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP-INGDFFAYTRHEPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gv 108 (442)
.+..+++.......+.++.+++++++|+|||+.++.. |+..+++.+++++.+.+...++..+ ...+...+++++|+||
T Consensus 66 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV 144 (486)
T 1t90_A 66 RRARILFNFQQLLSQHKEELAHLITIENGKNTKEALG-EVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGV 144 (486)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCE
Confidence 4445555555555566788899999999999999987 9999999999998766666555432 1245567899999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEe
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVA 188 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~ 188 (442)
|++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|+.+.++.|+.||+++.|.
T Consensus 145 V~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~ 224 (486)
T 1t90_A 145 VGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAIS 224 (486)
T ss_dssp EEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEE
T ss_pred EEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999558899999999999999
Q ss_pred ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCE-EEEcCccHHHHHHH
Q psy5844 189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSR-TFVQDTIYDEFVAR 267 (442)
Q Consensus 189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~-v~V~~~~~~~f~~~ 267 (442)
||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++
T Consensus 225 fTGS~~~g~~i~~~aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~ 302 (486)
T 1t90_A 225 FVGSKPVGEYVYKKGS-ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAK 302 (486)
T ss_dssp EESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHH
T ss_pred EeCCHHHHHHHHHHHh-ccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHH
Confidence 9999999999999888 589999999999999999999999999999999999999999999999 999999 9999999
Q ss_pred HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC-CCCcccccceeccCcchhHHHHHhh
Q psy5844 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG-DKGFYVQPTVFANVRDDMKIAREEI 346 (442)
Q Consensus 268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~v~pti~~~~~~~~~~~~~e~ 346 (442)
|+++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||...+ ..|+|+.|||+.++.+++.++++|+
T Consensus 303 l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEi 382 (486)
T 1t90_A 303 LQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEI 382 (486)
T ss_dssp HHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCC
T ss_pred HHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcc
Confidence 999999999999999999999999999999999999999999999999997432 3689999999999999999999999
Q ss_pred cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844 347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI 403 (442)
Q Consensus 347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~ 403 (442)
||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|++|+..
T Consensus 383 FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~ 439 (486)
T 1t90_A 383 FAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGV 439 (486)
T ss_dssp CSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSC
T ss_pred cCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCC
Confidence 999999999999999999999999999999999999999999999999999999853
No 36
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.1e-73 Score=584.70 Aligned_cols=372 Identities=28% Similarity=0.372 Sum_probs=343.8
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 109 (442)
.+.++++.......+.++.+++++++|+|||+.+++. |+..+++.+++++...++..+...+...+...+++++|+|||
T Consensus 65 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 143 (490)
T 3ju8_A 65 QRIELLERFAATLKSRADELARVIGEETGKPLWESAT-EVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVV 143 (490)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEE
Confidence 3444555554444556777899999999999999997 999999999999988877655543222344567789999999
Q ss_pred EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEee
Q psy5844 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAF 189 (442)
Q Consensus 110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~f 189 (442)
++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|+.+.++.|+.||+++.|.|
T Consensus 144 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~f 223 (490)
T 3ju8_A 144 AVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFF 223 (490)
T ss_dssp EEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEE
T ss_pred EEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999996589999999999999999
Q ss_pred cCCHHHHHHHHhhccCCCCcee-eeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCcc-HHHHHHH
Q psy5844 190 TGSTEVGKLVQQGSGASNLKRT-TLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTI-YDEFVAR 267 (442)
Q Consensus 190 tGs~~~~~~i~~~~~~~~~~~~-~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~-~~~f~~~ 267 (442)
|||+.+|+.|++.++ .+++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++
T Consensus 224 TGS~~~g~~i~~~aa-~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~ 302 (490)
T 3ju8_A 224 TGSSRTGNLLHSQFG-GQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLAR 302 (490)
T ss_dssp ESCHHHHHHHHHHTT-TCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHH
T ss_pred ECcHHHHHHHHHHhh-ccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHH
Confidence 999999999999988 588998 7999999999999999999999999999999999999999999999996 9999999
Q ss_pred HHHHHhhcccCC-CCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhh
Q psy5844 268 SGERAKRRTVGD-PFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI 346 (442)
Q Consensus 268 l~~~~~~~~~g~-p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~ 346 (442)
|+++++++++|+ |.|+++++||+++..+++++.+++++++.+|+++++||...+..|+|++|||+. +.+++.++++|+
T Consensus 303 l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEi 381 (490)
T 3ju8_A 303 LVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEF 381 (490)
T ss_dssp HHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCC
T ss_pred HHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccc
Confidence 999999999999 999999999999999999999999999999999999998766689999999999 999999999999
Q ss_pred cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844 347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE 404 (442)
Q Consensus 347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~ 404 (442)
||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|++|+...
T Consensus 382 FGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~ 439 (490)
T 3ju8_A 382 FGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLT 439 (490)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSS
T ss_pred cccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcC
Confidence 9999999999999999999999999999999999999999999999999999998753
No 37
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=1.8e-73 Score=584.77 Aligned_cols=366 Identities=33% Similarity=0.515 Sum_probs=340.6
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CC----cce-EEEe
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GD----FFA-YTRH 103 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~ 103 (442)
.+.++++.......+.++.+++++++|+|||+.++.. |+..+++.+++++.++++..++..+.+ .+ ... ++.+
T Consensus 63 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (475)
T 1euh_A 63 ERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRR 141 (475)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEE
Confidence 4445555555555556778899999999999999987 999999999999998877666543332 34 456 8999
Q ss_pred eccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCC
Q psy5844 104 EPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHP 182 (442)
Q Consensus 104 ~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~ 182 (442)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++ +.++.|+.||
T Consensus 142 ~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~ 221 (475)
T 1euh_A 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQ 221 (475)
T ss_dssp EECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCT
T ss_pred eccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999976 7899999999
Q ss_pred CccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHH
Q psy5844 183 GVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD 262 (442)
Q Consensus 183 ~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~ 262 (442)
+++.|.||||+.+|+.|++.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|
T Consensus 222 ~v~~V~fTGS~~~g~~i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d 298 (475)
T 1euh_A 222 AVNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVAD 298 (475)
T ss_dssp TCCEEEEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHH
T ss_pred CcCEEEEECchHHHHHHHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHH
Confidence 9999999999999999999765 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHH
Q psy5844 263 EFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIA 342 (442)
Q Consensus 263 ~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~ 342 (442)
+|+++|+++++++++|+|.| ++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.++.+++.++
T Consensus 299 ~f~~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~ 374 (475)
T 1euh_A 299 ELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLA 374 (475)
T ss_dssp HHHHHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGG
T ss_pred HHHHHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHH
Confidence 99999999999999999999 999999999999999999999999999999999875 58999999999999999999
Q ss_pred HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeC-CH
Q psy5844 343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFS-SI 403 (442)
Q Consensus 343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~-~~ 403 (442)
++|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+ +.
T Consensus 375 ~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~ 436 (475)
T 1euh_A 375 WEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQ 436 (475)
T ss_dssp TSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCC
T ss_pred cCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCC
Confidence 99999999999999999999999999999999999999999999999999999999998 54
No 38
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=3.4e-73 Score=589.96 Aligned_cols=379 Identities=26% Similarity=0.374 Sum_probs=343.4
Q ss_pred ccCCCCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccc-cCCCcceEEE
Q psy5844 24 AVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP-INGDFFAYTR 102 (442)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 102 (442)
.++...|...+++.+..+..+|++.++.++++|+|||+.+++.+|+.++++.+++++.+++++.+.... .+.+...+.+
T Consensus 118 ~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 197 (563)
T 4e3x_A 118 LKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVY 197 (563)
T ss_dssp HSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEE
Confidence 334334455555555567777789999999999999999998833999999999999998877653221 1123445677
Q ss_pred eeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcC
Q psy5844 103 HEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQH 181 (442)
Q Consensus 103 ~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~ 181 (442)
+.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++ ++++.|+.|
T Consensus 198 r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~h 276 (563)
T 4e3x_A 198 RGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSS 276 (563)
T ss_dssp CBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTC
T ss_pred ecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhC
Confidence 8888999999999999999999999999 69999999999999999999999999999999999999987 889999999
Q ss_pred CCccEEeecCCHHHHHHHHhhccCCCCc------eeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEE
Q psy5844 182 PGVDKVAFTGSTEVGKLVQQGSGASNLK------RTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTF 255 (442)
Q Consensus 182 ~~v~~v~ftGs~~~~~~i~~~~~~~~~~------~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~ 255 (442)
|+++.|.||||+.+|+.|++.++ .+++ |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||
T Consensus 277 p~v~~I~FTGSt~vG~~i~~~aa-~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~ 355 (563)
T 4e3x_A 277 EHLCGINFTGSVPTFKHLWRQVA-QNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLY 355 (563)
T ss_dssp TTEEEEEEESCHHHHHHHHHHHH-HTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEE
T ss_pred CCcCEEEEECCHHHHHHHHHHHH-hhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEE
Confidence 99999999999999999999888 4666 5999999999999999999999999999999999999999999999
Q ss_pred EcCccHHHHHHHHHHHHhhcccCCC-CCCCCccCcCCCHHHHHHHHHHHHHHHh-cCCEEEeCCcccCCCCcccccceec
Q psy5844 256 VQDTIYDEFVARSGERAKRRTVGDP-FDLNVEQGPQIDKEQMDKILEFIESGKS-QGAQLVAGGGRAGDKGFYVQPTVFA 333 (442)
Q Consensus 256 V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~g~~v~pti~~ 333 (442)
||++++|+|+++|+++++++++||| .|+++++||+++..+++++.++|++++. .|+++++||...+..|+|++|||+.
T Consensus 356 V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~ 435 (563)
T 4e3x_A 356 VPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIE 435 (563)
T ss_dssp EEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEE
T ss_pred EecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEe
Confidence 9999999999999999999999999 9999999999999999999999999996 7999999998766689999999999
Q ss_pred cCcchhHHHHHhhcCCcccccccCC--HHHHHHHH-hcCCCCceEEEecCCCChhhhhccccE--eeeEEeeCCHH
Q psy5844 334 NVRDDMKIAREEIFGPVQQLIRFSS--IEEVIERA-NNSDYGLAAAVFTKDLDKTNYVTQGLR--AGTLIRFSSIE 404 (442)
Q Consensus 334 ~~~~~~~~~~~e~fgPvl~v~~~~~--~~eai~~a-n~~~~gl~~~v~s~d~~~~~~~~~~~~--~G~V~vN~~~~ 404 (442)
++.+++.++++|+||||++++.|++ ++|+|+++ |+++|||+++|||+|.+.+.+++++++ +|+|+||+...
T Consensus 436 ~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~ 511 (563)
T 4e3x_A 436 SKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKST 511 (563)
T ss_dssp ESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSC
T ss_pred cCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCC
Confidence 9999999999999999999999997 79999999 789999999999999999999999865 99999998754
No 39
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=7.4e-72 Score=609.81 Aligned_cols=374 Identities=32% Similarity=0.491 Sum_probs=346.9
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc-CCCcceEEEeeccce
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGV 108 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gv 108 (442)
.+..+++.......++++.++.++++|+|||+.++.. |+..+++.++|++.+++++.+..... ..+..+++.++|+||
T Consensus 591 eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGV 669 (1026)
T 4f9i_A 591 TRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGV 669 (1026)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCce
Confidence 3444555554444567788899999999999999998 99999999999999988775543322 256678899999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV 187 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v 187 (442)
|++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++ ++++.|+.||+++.|
T Consensus 670 V~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V 749 (1026)
T 4f9i_A 670 AAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLI 749 (1026)
T ss_dssp EEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEE
T ss_pred EEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEE
Confidence 9999999999999999999999999999999999999999999999999999999999999987 899999999999999
Q ss_pred eecCCHHHHHHHHhhccC-----CCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHH
Q psy5844 188 AFTGSTEVGKLVQQGSGA-----SNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD 262 (442)
Q Consensus 188 ~ftGs~~~~~~i~~~~~~-----~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~ 262 (442)
+||||+.+|+.|++.+++ +++||+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|+|||++++|
T Consensus 750 ~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d 829 (1026)
T 4f9i_A 750 AFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYD 829 (1026)
T ss_dssp EEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHH
T ss_pred EeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHH
Confidence 999999999999998873 368999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHH
Q psy5844 263 EFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIA 342 (442)
Q Consensus 263 ~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~ 342 (442)
+|+++|++.++++++|+|.|+++++||+++..+++++.++|++++.+| ++++||...+..|+|+.|||+.++.+++.++
T Consensus 830 ~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~ 908 (1026)
T 4f9i_A 830 KFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIA 908 (1026)
T ss_dssp HHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGG
T ss_pred HHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCcccc
Confidence 999999999999999999999999999999999999999999999999 9999987654459999999999999999999
Q ss_pred HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844 343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE 405 (442)
Q Consensus 343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~ 405 (442)
++|+||||++++.|++++|+|+++|+++|||+++|||+|.+.+.++++++++|+|+||+....
T Consensus 909 ~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~ 971 (1026)
T 4f9i_A 909 QEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTG 971 (1026)
T ss_dssp TSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCC
T ss_pred CceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999997654
No 40
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=4.6e-72 Score=574.12 Aligned_cols=372 Identities=27% Similarity=0.417 Sum_probs=339.6
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccc-ccC-CCcceEEEeeccc
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI-PIN-GDFFAYTRHEPVG 107 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~P~G 107 (442)
.|..+++.......+.++.+++++++|+||+. ++.. |+..+++.+++++..+.+...... ... .+...+..++|+|
T Consensus 51 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~G 128 (474)
T 4h7n_A 51 GRITTLQQWKQAILSRREQLTEALVNDTGRLS-ITVL-EIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYP 128 (474)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-HHHH-HHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-HHHH-HHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEecc
Confidence 34455555545455567888999999999985 4456 999999999999988766544322 222 4556678889999
Q ss_pred eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEE
Q psy5844 108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKV 187 (442)
Q Consensus 108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v 187 (442)
||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|+.+.+..|+.| ++.|
T Consensus 129 Vv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~--v~~v 206 (474)
T 4h7n_A 129 LVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGANLINY--VDFV 206 (474)
T ss_dssp EEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT--CSEE
T ss_pred EEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHhhhhhhcccccceeeccccchhhhhhhhc--cceE
Confidence 99999999999999999999999999999999999999999999999999999999999999977888899876 8999
Q ss_pred eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844 188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267 (442)
Q Consensus 188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~ 267 (442)
.||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++
T Consensus 207 ~FTGS~~~G~~i~~~aa-~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~ 285 (474)
T 4h7n_A 207 CFTGSVATGREVAETAA-RRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQ 285 (474)
T ss_dssp EEESCHHHHHHHHHHHH-HHTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHH
T ss_pred Eeccccchhhhhhhhhh-cccccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHH
Confidence 99999999999999888 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC-CCCcccccceeccCcchhHHHHHhh
Q psy5844 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG-DKGFYVQPTVFANVRDDMKIAREEI 346 (442)
Q Consensus 268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~v~pti~~~~~~~~~~~~~e~ 346 (442)
|.+..+++++|+|.++++++||+++..+.+++.+++++++.+|+++++||...+ ..|+|+.|||+.++.+++.++++|+
T Consensus 286 l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEi 365 (474)
T 4h7n_A 286 LIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEET 365 (474)
T ss_dssp HHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCC
T ss_pred HHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccc
Confidence 999999999999999999999999999999999999999999999999987643 4689999999999999999999999
Q ss_pred cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHHH
Q psy5844 347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEV 406 (442)
Q Consensus 347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~a 406 (442)
||||++++.|++++|+|+++|+++|||+++|||+|.+++.++++++++|+|+||+....+
T Consensus 366 FGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~ 425 (474)
T 4h7n_A 366 FGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTA 425 (474)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGG
T ss_pred cCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccC
Confidence 999999999999999999999999999999999999999999999999999999876543
No 41
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1.8e-71 Score=567.78 Aligned_cols=365 Identities=25% Similarity=0.381 Sum_probs=331.1
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcc-c---ccCCCcceEEEeec
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKT-I---PINGDFFAYTRHEP 105 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~P 105 (442)
.|..+++.......+.++.+++++++|+|||+.++...|+..+++.+++++.......... . ....+...++.++|
T Consensus 41 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 120 (469)
T 3sza_A 41 FRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEP 120 (469)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHHHHHHSCEECCCCGGGTTSEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCccccCCCccceeeccC
Confidence 4445555555555667788899999999999999985599999999998876654332211 1 11134567899999
Q ss_pred cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCcc
Q psy5844 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVD 185 (442)
Q Consensus 106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~ 185 (442)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|+++....|+.| ++|
T Consensus 121 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~~~~~~~ll~~-~vd 198 (469)
T 3sza_A 121 LGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGGVPETTELLKE-RFD 198 (469)
T ss_dssp CSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-SCTTTSCBCCCSHHHHHHHTTS-CCS
T ss_pred CCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCcceEEEEECCHHHHHHHHhc-CCC
Confidence 99999999999999999999999999999999999999999999999999998 9999999999976666677777 799
Q ss_pred EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844 186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV 265 (442)
Q Consensus 186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~ 265 (442)
.|+||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus 199 ~I~FTGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~ 277 (469)
T 3sza_A 199 HILYTGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIV 277 (469)
T ss_dssp EEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHHH
T ss_pred EEEEECCHHHHHHHHHHHh-hccCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHHH
Confidence 9999999999999999988 689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHh
Q psy5844 266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE 345 (442)
Q Consensus 266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e 345 (442)
++|+++++++ +|+|.++++++||+++..+++++.+++ +|+++++||... ..|+|+.|||+.++.++|.++++|
T Consensus 278 ~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eE 350 (469)
T 3sza_A 278 EKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD-AATRYIAPTILTDVDPQSPVMQEE 350 (469)
T ss_dssp HHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE-TTTTEECCEEEESCCTTSGGGTSC
T ss_pred HHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC-CCCceeCCeeecCCCCcchhhhcc
Confidence 9999999998 699999999999999999999999998 589999999764 468999999999999999999999
Q ss_pred hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844 346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE 404 (442)
Q Consensus 346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~ 404 (442)
+||||+++..|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||+...
T Consensus 351 iFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~ 409 (469)
T 3sza_A 351 IFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIV 409 (469)
T ss_dssp CCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSG
T ss_pred ccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCC
Confidence 99999999999999999999999999999999999999999999999999999999753
No 42
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=1.7e-69 Score=552.73 Aligned_cols=363 Identities=28% Similarity=0.389 Sum_probs=330.8
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCc-ccccC---CCcceEEEeec
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK-TIPIN---GDFFAYTRHEP 105 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~P 105 (442)
.+..+++.......+.++.+++++++|+|||..+++..|+..+++.+++++..+++..+. ....+ .+...++.++|
T Consensus 51 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 130 (457)
T 3lns_A 51 FRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEP 130 (457)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeec
Confidence 455555555555556678889999999999999998449999999999999887665432 12111 34568999999
Q ss_pred cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCcc
Q psy5844 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVD 185 (442)
Q Consensus 106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~ 185 (442)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|+.+.+..|+. +++|
T Consensus 131 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~~~~~~~L~~-~~vd 208 (457)
T 3lns_A 131 YGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQGGRDENSHLLS-LPFD 208 (457)
T ss_dssp CCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH-CCTTTEEECCCCHHHHHHHTT-SCCS
T ss_pred ceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCHhhEEEecCCHHHHHHHhc-CCCC
Confidence 99999999999999999999999999999999999999999999999999999 999999999995588899998 6899
Q ss_pred EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844 186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV 265 (442)
Q Consensus 186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~ 265 (442)
.|.||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus 209 ~V~fTGS~~~G~~i~~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~ 287 (457)
T 3lns_A 209 FIFFTGSPNVGKVVMQAAA-KHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALL 287 (457)
T ss_dssp EEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHH
T ss_pred EEEEECCHHHHHHHHHHHh-hccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHH
Confidence 9999999999999999988 689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHh
Q psy5844 266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE 345 (442)
Q Consensus 266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e 345 (442)
++|++++++++ |.++ ++||+++..+++++.++++++ ++++++||... ..|+|+.|||+.++.+++.++++|
T Consensus 288 ~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE 358 (457)
T 3lns_A 288 ERLVERVKTEL---PEIN--STGKLVTERQVQRLVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEE 358 (457)
T ss_dssp HHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSC
T ss_pred HHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhhcCc
Confidence 99999999987 6766 999999999999999999875 35899998753 368999999999999999999999
Q ss_pred hcCCcccccccCCHHHHHHHHhc-CCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844 346 IFGPVQQLIRFSSIEEVIERANN-SDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE 404 (442)
Q Consensus 346 ~fgPvl~v~~~~~~~eai~~an~-~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~ 404 (442)
+||||+++..|++++|+|+++|+ .++||+++|||+|.+.+.++++++++|.|+||++..
T Consensus 359 iFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~ 418 (457)
T 3lns_A 359 LFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVML 418 (457)
T ss_dssp CCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSG
T ss_pred ccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCC
Confidence 99999999999999999999999 999999999999999999999999999999999754
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1.8e-69 Score=562.18 Aligned_cols=368 Identities=23% Similarity=0.314 Sum_probs=326.2
Q ss_pred CCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcC-------cccccC-CC-cceEE
Q psy5844 31 KPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHG-------KTIPIN-GD-FFAYT 101 (442)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~-~~~~~ 101 (442)
+..+++.......+.++.+++++++|+|||+.++.. |+..+++.+++++..++++.+ +..+.. .+ ...+.
T Consensus 68 R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 146 (534)
T 2y53_A 68 RAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQH 146 (534)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEE
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceE
Confidence 344444444444455666799999999999999997 999999999999988766533 111221 12 24578
Q ss_pred Eeecc-ceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhC-CCCCcEEeecCCc-cchhhh
Q psy5844 102 RHEPV-GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAG-IPEGVVNIVPGYG-DAGAAL 178 (442)
Q Consensus 102 ~~~P~-Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~ag-lp~~~~~~v~~~~-~~~~~l 178 (442)
.++|+ |||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++ +++..|
T Consensus 147 ~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l 226 (534)
T 2y53_A 147 VLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI 226 (534)
T ss_dssp EEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC
T ss_pred EEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc
Confidence 89997 99999999999999999999999999999999999999999999999999999 7999999999865 433333
Q ss_pred hcCCCccEEeecCCHHHHHHHHhhcc-CCCCceeeeecCCCCceEEeCCC-----CHHHHHHHHHHHhhccCCCcccCCC
Q psy5844 179 VQHPGVDKVAFTGSTEVGKLVQQGSG-ASNLKRTTLELGGKSPNIIFADA-----DLDAAVEGAHFGLFFNMGQCCCAGS 252 (442)
Q Consensus 179 ~~~~~v~~v~ftGs~~~~~~i~~~~~-~~~~~~~~~e~gG~~~~iV~~da-----d~~~a~~~i~~~~~~~~Gq~C~s~~ 252 (442)
+.++.|.||||+.+|+.|++.++ ..++||+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++
T Consensus 227 ---~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~ 303 (534)
T 2y53_A 227 ---RSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIR 303 (534)
T ss_dssp ---CTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEE
T ss_pred ---cccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCC
Confidence 56999999999999999998763 24899999999999999999999 9999999999999999999999999
Q ss_pred EEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC------CCCcc
Q psy5844 253 RTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG------DKGFY 326 (442)
Q Consensus 253 ~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~------~~g~~ 326 (442)
|||||++++|+|+++|+++++++++|||.|+++++||++++.+++++.++|+++ .+|+++++||.... ..|+|
T Consensus 304 rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~ 382 (534)
T 2y53_A 304 RAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAAC 382 (534)
T ss_dssp EEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCC
T ss_pred EEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCce
Confidence 999999999999999999999999999999999999999999999999999999 68999999986421 35899
Q ss_pred cccceeccCcch--hHHHHHhhcCCcccccccC---CH-----HHHHHHHhcCCCCceEEEecCCCChhhhhcccc--Ee
Q psy5844 327 VQPTVFANVRDD--MKIAREEIFGPVQQLIRFS---SI-----EEVIERANNSDYGLAAAVFTKDLDKTNYVTQGL--RA 394 (442)
Q Consensus 327 v~pti~~~~~~~--~~~~~~e~fgPvl~v~~~~---~~-----~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~--~~ 394 (442)
++|||+.++.++ +.++++|+||||++++.|+ ++ +|+|+++|+.++||+++|||+|.+.+.++++++ ++
T Consensus 383 ~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~a 462 (534)
T 2y53_A 383 VAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSH 462 (534)
T ss_dssp CCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTE
T ss_pred ecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhC
Confidence 999999998877 5789999999999999999 99 999999999999999999999999999999999 89
Q ss_pred eeEEeeCCH
Q psy5844 395 GTLIRFSSI 403 (442)
Q Consensus 395 G~V~vN~~~ 403 (442)
|+|+||+..
T Consensus 463 G~V~vN~~~ 471 (534)
T 2y53_A 463 GRVHAISPS 471 (534)
T ss_dssp EEEEEECGG
T ss_pred CEEEEcCCc
Confidence 999999864
No 44
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=5.9e-69 Score=585.74 Aligned_cols=369 Identities=29% Similarity=0.434 Sum_probs=337.0
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccc--ccCCCcceEEEeeccc
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI--PINGDFFAYTRHEPVG 107 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~G 107 (442)
.+..+++.......+.++.+++++++|+|||+.++.. |+..+++.++|++..+++..+... +.+.+...++.++|+|
T Consensus 573 eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~G 651 (1001)
T 3haz_A 573 IRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRG 651 (1001)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCCCceEEEEeCCc
Confidence 3444444444444455677799999999999999998 999999999999999887766543 2235677899999999
Q ss_pred eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEE
Q psy5844 108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKV 187 (442)
Q Consensus 108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v 187 (442)
||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|+++.+..|+.||+++.|
T Consensus 652 VV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V 731 (1001)
T 3haz_A 652 VFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRIGAALTAHPDIAGV 731 (1001)
T ss_dssp EEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHCTTCCEE
T ss_pred EEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecCchHHHHHHhCCCcCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999988339999999999999
Q ss_pred eecCCHHHHHHHHhhccCC--CCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844 188 AFTGSTEVGKLVQQGSGAS--NLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV 265 (442)
Q Consensus 188 ~ftGs~~~~~~i~~~~~~~--~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~ 265 (442)
+||||+.+|+.|++.++++ +++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+
T Consensus 732 ~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~ 811 (1001)
T 3haz_A 732 VFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMI 811 (1001)
T ss_dssp EEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHH
T ss_pred EecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHH
Confidence 9999999999999887742 58999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHh
Q psy5844 266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE 345 (442)
Q Consensus 266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e 345 (442)
++|++.++++++|+|.++++++||+++..+.+++.++|++++..| ++ +||... +.|+|+.|||+.. .++.++++|
T Consensus 812 ~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~-~~G~fv~PTvl~~--~~~~~~~eE 886 (1001)
T 3haz_A 812 EMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPA-PEGCFVAPHIFEL--TEAGQLTEE 886 (1001)
T ss_dssp HHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCC-CSSSCCCCEEEEC--SSGGGCCSC
T ss_pred HHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccC-CCCcEEeeEEecC--CCHHHHhcc
Confidence 999999999999999999999999999999999999999999888 88 887653 4599999999974 567778999
Q ss_pred hcCCcccccccCC--HHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844 346 IFGPVQQLIRFSS--IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE 404 (442)
Q Consensus 346 ~fgPvl~v~~~~~--~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~ 404 (442)
+||||++++.|++ ++|+|+++|+++|||+++|||+|.+.+.++++++++|+|+||+...
T Consensus 887 iFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~ 947 (1001)
T 3haz_A 887 VFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMI 947 (1001)
T ss_dssp CCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSC
T ss_pred ccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCc
Confidence 9999999999996 8999999999999999999999999999999999999999999764
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=2.2e-66 Score=536.24 Aligned_cols=358 Identities=19% Similarity=0.234 Sum_probs=319.9
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhh--hcCcccc----c--CCC-cceE
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADK--IHGKTIP----I--NGD-FFAY 100 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~--~~~~~~~----~--~~~-~~~~ 100 (442)
.+..+++.......+.++.+++++++|+|||+.++.. |+..+++.+++++..+++ ..+..+. . +.+ ...+
T Consensus 53 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (510)
T 1ez0_A 53 KRASLLRTIASELEARSDDIIARAHLETALPEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIR 131 (510)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEE
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCce
Confidence 4555555555555666788899999999999999988 999999999999988865 3333221 1 112 2358
Q ss_pred EEeeccceEEEecccccchHHH--HhhhhhhhccCCeEEecCCCCChHHHHHHHHHH----HHhCCCCCcEEeecCCc-c
Q psy5844 101 TRHEPVGVCGQIIPWNFPLLML--AWKIAPALATGNTIVLKPAEQTPLTALAVGALI----AEAGIPEGVVNIVPGYG-D 173 (442)
Q Consensus 101 ~~~~P~Gvv~~i~p~n~P~~~~--~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l----~~aglp~~~~~~v~~~~-~ 173 (442)
++++|+|||++|+|||||+... .+++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+++|.+ +
T Consensus 132 ~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~ 211 (510)
T 1ez0_A 132 RQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRA 211 (510)
T ss_dssp EEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTH
T ss_pred EEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHH
Confidence 8999999999999999999984 499999999999999999999999999999998 56799999999999966 8
Q ss_pred chhhhhcCCCccEEeecCCHHHHHHHHhhccCCCC--ceeeeecCCCCceEEeCCCCHH--HHHHHHHHHhhccCCCccc
Q psy5844 174 AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNL--KRTTLELGGKSPNIIFADADLD--AAVEGAHFGLFFNMGQCCC 249 (442)
Q Consensus 174 ~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~--~~~~~e~gG~~~~iV~~dad~~--~a~~~i~~~~~~~~Gq~C~ 249 (442)
.++.|+.||.++.|+||||+.+|+.|++.++ .++ ||+++|+|||||+||++|||++ .|++.+++++|.|+||.|+
T Consensus 212 ~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa-~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~ 290 (510)
T 1ez0_A 212 LGQALVSHPEIKAVGFTGSVGGGRALFNLAH-ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCT 290 (510)
T ss_dssp HHHHHHHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTT
T ss_pred HHHHHHcCCCCCEEEEeCcHHHHHHHHHHhh-ccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcC
Confidence 8999999999999999999999999999888 464 9999999999999999999999 9999999999999999999
Q ss_pred CCCEEEEcCc-cHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHh-cCCEEEeCCcccCCCCccc
Q psy5844 250 AGSRTFVQDT-IYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKS-QGAQLVAGGGRAGDKGFYV 327 (442)
Q Consensus 250 s~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~g~~v 327 (442)
+++|||||++ ++|+|+++|.++++++++ ||++++.+.+++.+++++++. +|+++++||. .|+|+
T Consensus 291 a~~rvlV~~~~i~d~f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~ 356 (510)
T 1ez0_A 291 KPGVVFALNTPETQAFIETAQSLIRQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCV 356 (510)
T ss_dssp CCCEEEEESSHHHHHHHHHHHHHHHHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSB
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEe
Confidence 9999999999 999999999999999863 688999999999999999984 7999999986 28999
Q ss_pred ccceeccCcch---hHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCC--Chhhhhcccc--EeeeEEee
Q psy5844 328 QPTVFANVRDD---MKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDL--DKTNYVTQGL--RAGTLIRF 400 (442)
Q Consensus 328 ~pti~~~~~~~---~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~--~~~~~~~~~~--~~G~V~vN 400 (442)
+|||+....++ +.++++|+||||++++.|++++|+|+++|+.++||+++|||+|. +.+.++++++ ++|.|+||
T Consensus 357 ~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN 436 (510)
T 1ez0_A 357 ASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFN 436 (510)
T ss_dssp CCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEES
T ss_pred cCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEEC
Confidence 99999877666 88999999999999999999999999999999999999999987 6899999998 79999999
Q ss_pred CCH
Q psy5844 401 SSI 403 (442)
Q Consensus 401 ~~~ 403 (442)
+..
T Consensus 437 ~~~ 439 (510)
T 1ez0_A 437 GWP 439 (510)
T ss_dssp SCS
T ss_pred CCC
Confidence 864
No 46
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.9e-66 Score=537.51 Aligned_cols=361 Identities=22% Similarity=0.255 Sum_probs=319.3
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhh--cCcccc----c--C-CCcceE
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKI--HGKTIP----I--N-GDFFAY 100 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~--~~~~~~----~--~-~~~~~~ 100 (442)
.+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++..+++. .+.... . + .+...+
T Consensus 86 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (528)
T 3v4c_A 86 ERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNG-ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIR 164 (528)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEE
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcce
Confidence 4445555555555566778899999999999999998 9999999999999888662 232221 0 1 234578
Q ss_pred EEeeccceEEEecccccchHHHH--hhhhhhhccCCeEEecCCCCChHHHHHHHHHH----HHhCCCCCcEEeecCCc-c
Q psy5844 101 TRHEPVGVCGQIIPWNFPLLMLA--WKIAPALATGNTIVLKPAEQTPLTALAVGALI----AEAGIPEGVVNIVPGYG-D 173 (442)
Q Consensus 101 ~~~~P~Gvv~~i~p~n~P~~~~~--~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l----~~aglp~~~~~~v~~~~-~ 173 (442)
+.++|+|||++|+|||||+...+ +++++||++||+||+|||+.+|.++..+++++ .++|+|+|++|+++|++ +
T Consensus 165 ~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~ 244 (528)
T 3v4c_A 165 LVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRD 244 (528)
T ss_dssp EEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHH
T ss_pred eEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHH
Confidence 99999999999999999999855 89999999999999999999999999998875 46899999999999977 8
Q ss_pred chhhhhcCCCccEEeecCCHHHHHHHHhhccCCCC--ceeeeecCCCCceEEeCCC---CHHHHHHHHHHHhhccCCCcc
Q psy5844 174 AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNL--KRTTLELGGKSPNIIFADA---DLDAAVEGAHFGLFFNMGQCC 248 (442)
Q Consensus 174 ~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~--~~~~~e~gG~~~~iV~~da---d~~~a~~~i~~~~~~~~Gq~C 248 (442)
.++.|+.||+++.|.||||+.+|+.|++.++ .++ +|+++|+|||||+||++|| |++.|++.+++++|.|+||.|
T Consensus 245 ~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa-~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C 323 (528)
T 3v4c_A 245 VGHALVQHPHIKAVGFTGSLAGGRALFDLCA-ARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFC 323 (528)
T ss_dssp HHHHHHHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCT
T ss_pred HHHHHHhCCCCCEEEEECChHHHHHHHHHHh-hccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCcc
Confidence 9999999999999999999999999999888 577 9999999999999999999 889999999999999999999
Q ss_pred cCCCEEEEcCc-cHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCccc
Q psy5844 249 CAGSRTFVQDT-IYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYV 327 (442)
Q Consensus 249 ~s~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v 327 (442)
++++|||||++ ++|+|+++|+++++++++ ++.+||+++..+.+++.++++ .+|+++++||.. .|+|+
T Consensus 324 ~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~ 391 (528)
T 3v4c_A 324 TNPGIAVVIEGADADRFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDA 391 (528)
T ss_dssp TCCCEEEEESSHHHHHHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEE
T ss_pred ccCcEEEEecccHHHHHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCcee
Confidence 99999999997 999999999999998864 367899998888887777763 479999999975 68999
Q ss_pred ccceeccCcch---hHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecC--CCChhhhhccccE--eeeEEee
Q psy5844 328 QPTVFANVRDD---MKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTK--DLDKTNYVTQGLR--AGTLIRF 400 (442)
Q Consensus 328 ~pti~~~~~~~---~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~--d~~~~~~~~~~~~--~G~V~vN 400 (442)
.|||+.+..++ +.++++|+||||++++.|++++|+|+++|+.++||+++|||+ |.+++.+++++++ +|+|+||
T Consensus 392 ~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN 471 (528)
T 3v4c_A 392 SPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVN 471 (528)
T ss_dssp CCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEES
T ss_pred ccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEc
Confidence 99999877776 788999999999999999999999999999999999999999 7789999999997 9999999
Q ss_pred CCHH
Q psy5844 401 SSIE 404 (442)
Q Consensus 401 ~~~~ 404 (442)
+...
T Consensus 472 ~~~~ 475 (528)
T 3v4c_A 472 GFPT 475 (528)
T ss_dssp SCTT
T ss_pred CCCC
Confidence 9653
No 47
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=3.9e-62 Score=499.30 Aligned_cols=354 Identities=15% Similarity=0.175 Sum_probs=301.3
Q ss_pred CCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccce
Q psy5844 29 ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGV 108 (442)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv 108 (442)
..+.++++.......+.++.+++++++|+|||..+++..+...+++.+.++.... +..+. +..+.+...+..++|+||
T Consensus 34 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~~~~~-~~~g~-~~~~~~~~~~~~~~P~GV 111 (464)
T 3k9d_A 34 QQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYIKDM-KTIGM-LKEDNEKKVMEVAVPLGV 111 (464)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTTC-CCSEE-EEEETTTTEEEEEEECCE
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHhhhcc-cccce-eccCCCceeEEEEecceE
Confidence 3455666666555556678889999999999999886545444444443333211 11121 122245678899999999
Q ss_pred EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHH----HHHHHhCCCCCcEEeecCCc-cchhhhhcCCC
Q psy5844 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVG----ALIAEAGIPEGVVNIVPGYG-DAGAALVQHPG 183 (442)
Q Consensus 109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~----~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~ 183 (442)
|++|+|||||+...++++++||++||+||+|||+.+|.++..++ +++.++|+|+|+++++++++ +.++.|+.||+
T Consensus 112 v~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~ 191 (464)
T 3k9d_A 112 VAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKD 191 (464)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTT
T ss_pred EEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999998865 45688899999999999976 89999999999
Q ss_pred ccEEeecCCHHHHHHHHhhccCCCCceeeeecC-CCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHH
Q psy5844 184 VDKVAFTGSTEVGKLVQQGSGASNLKRTTLELG-GKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD 262 (442)
Q Consensus 184 v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~g-G~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~ 262 (442)
+|.|+||||+.+. +.++ .++||+ +|+| ||+|+||++|||++.|++.+++++|+|+||.|++++|||||+++||
T Consensus 192 vd~I~fTGs~~v~----~~a~-~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d 265 (464)
T 3k9d_A 192 TAVILATGGSAMV----KAAY-SSGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKE 265 (464)
T ss_dssp EEEEEECSCHHHH----HHHT-TSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHH
T ss_pred CCEEEEeCChHHH----HHHH-hcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHH
Confidence 9999999999854 3444 578999 7888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH-------hhcccCCCC-CCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceecc
Q psy5844 263 EFVARSGERA-------KRRTVGDPF-DLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFAN 334 (442)
Q Consensus 263 ~f~~~l~~~~-------~~~~~g~p~-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~ 334 (442)
+|+++|+++. +.+++|+|. ++++++||+++..+++++.++++.++.+|+++++||.. +
T Consensus 266 ~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~--------------~ 331 (464)
T 3k9d_A 266 AVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET--------------K 331 (464)
T ss_dssp HHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC--------------C
T ss_pred HHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC--------------C
Confidence 9999999985 567889998 77899999999999999999999888889999998853 2
Q ss_pred CcchhHHHHHhhcCCcccccccCCHHHHH----HHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844 335 VRDDMKIAREEIFGPVQQLIRFSSIEEVI----ERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE 405 (442)
Q Consensus 335 ~~~~~~~~~~e~fgPvl~v~~~~~~~eai----~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~ 405 (442)
+.+++.. .+|+||||++++.|++++|+| +++|+.++||+++|||+|.+.+.++++++++|.|++|++...
T Consensus 332 v~~~~~~-~~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~ 405 (464)
T 3k9d_A 332 VGAKIPY-SREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGAL 405 (464)
T ss_dssp CSTTCGG-GSCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHH
T ss_pred CCCCCcc-cccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCccc
Confidence 2333443 379999999999999999997 789999999999999999999999999999999999999864
No 48
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=8e-62 Score=495.99 Aligned_cols=336 Identities=15% Similarity=0.095 Sum_probs=280.1
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCCh----hhhchhHHHH-HHHHHHHHHHhHhhhc------Cccccc---CC
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPY----NMSYSVDVEY-SLRTLRYYAGFADKIH------GKTIPI---NG 95 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~----~~a~~~ev~~-~~~~~~~~~~~~~~~~------~~~~~~---~~ 95 (442)
.+.++++.......+.++.+++++++|+|||. .++...|+.. ++..+++++..+++.. ++..+. +.
T Consensus 37 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~~~~~~~~~~~~g~~~~~~~~~~ 116 (468)
T 1vlu_A 37 GRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDD 116 (468)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSCCSSSCEEEEEEEET
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHHHHHHhhcCCCCCeecccccCCC
Confidence 45556666655556678889999999999999 8886349999 9999999988776654 443221 12
Q ss_pred CcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHH----H----hCCCCCcEEe
Q psy5844 96 DFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIA----E----AGIPEGVVNI 167 (442)
Q Consensus 96 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~----~----aglp~~~~~~ 167 (442)
+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+++++. + +|+|+|++|+
T Consensus 117 ~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~v 194 (468)
T 1vlu_A 117 GLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQL 194 (468)
T ss_dssp TEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEE
T ss_pred CceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEE
Confidence 455789999999999999999 9 9999999999999999999999999999999999995 8 9999999999
Q ss_pred ecCCc-cchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCC
Q psy5844 168 VPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQ 246 (442)
Q Consensus 168 v~~~~-~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq 246 (442)
++ ++ ++++.|+.||++|.|.||||+.+|+.|++.+ +||+++|+|||||+||++|||++.|++.+++++|.|+|
T Consensus 195 v~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G- 268 (468)
T 1vlu_A 195 IE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPA- 268 (468)
T ss_dssp CC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC----
T ss_pred EC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCC-
Confidence 99 66 7899999999999999999999999999864 69999999999999999999999999999999999999
Q ss_pred cccCCCEEEEcCccHHHHHHHHHHHHhhccc---CCCCCCCCccCcCCCHHHHHHHHHH-HHHHHhcCCEEEeCCcccCC
Q psy5844 247 CCCAGSRTFVQDTIYDEFVARSGERAKRRTV---GDPFDLNVEQGPQIDKEQMDKILEF-IESGKSQGAQLVAGGGRAGD 322 (442)
Q Consensus 247 ~C~s~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~~~~~-i~~a~~~Ga~~~~gg~~~~~ 322 (442)
.|++++|||||+++ |+|+++|.+.++++++ |+|.+ .++ +++++ ++++||.
T Consensus 269 ~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~---- 322 (468)
T 1vlu_A 269 GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE---- 322 (468)
T ss_dssp -CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH----
T ss_pred cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcccccccc----eeeccCC----
Confidence 99999999999999 9999999999999987 87643 334 55554 3555664
Q ss_pred CCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCC
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSS 402 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~ 402 (442)
| +.||++ +..++.++++|+||||+++..|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+.
T Consensus 323 -g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~ 397 (468)
T 1vlu_A 323 -A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNAS 397 (468)
T ss_dssp -H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSC
T ss_pred -C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCC
Confidence 4 689987 67889999999999999999999999999999999999999999999999999999999999999987
Q ss_pred HH
Q psy5844 403 IE 404 (442)
Q Consensus 403 ~~ 404 (442)
..
T Consensus 398 ~~ 399 (468)
T 1vlu_A 398 TR 399 (468)
T ss_dssp GG
T ss_pred CC
Confidence 63
No 49
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.4e-61 Score=493.60 Aligned_cols=351 Identities=19% Similarity=0.254 Sum_probs=295.9
Q ss_pred CCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHH-HHHHHhHhhhcCcccccCCCcceEEEeecc
Q psy5844 28 PITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTL-RYYAGFADKIHGKTIPINGDFFAYTRHEPV 106 (442)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 106 (442)
..++..+++.......+.++.+++++++|+|||..++...|+..+++.+ +++.. .+..+ .++.+.+...+..++|+
T Consensus 28 ~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~~~--~~~~g-~~~~~~~~~~~~~~~P~ 104 (452)
T 3my7_A 28 QEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYKD--EQTCG-ILEEDDNLGTMTIAEPV 104 (452)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTT--CCCSE-EC-------CEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhhh--ccccc-cccCCCCCceEEEecCc
Confidence 3456667776666666778889999999999999999865777777666 33322 11112 12222345578999999
Q ss_pred ceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHH----HhCCCCCcEEeecCCc-cchhhhhcC
Q psy5844 107 GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIA----EAGIPEGVVNIVPGYG-DAGAALVQH 181 (442)
Q Consensus 107 Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~----~aglp~~~~~~v~~~~-~~~~~l~~~ 181 (442)
|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++. ++|+|+|+++++++++ +.++.|+.|
T Consensus 105 GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~ 184 (452)
T 3my7_A 105 GIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKH 184 (452)
T ss_dssp CEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHC
T ss_pred eEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCCHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999998888875 7899999999999977 899999999
Q ss_pred CCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccH
Q psy5844 182 PGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIY 261 (442)
Q Consensus 182 ~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~ 261 (442)
|+++.|.||||+.+++. ++ +++||+++|+|||+|+||++|||++.|++.+++++|+|+||.|++++|||||+++|
T Consensus 185 p~v~~V~fTGs~~~~~~----a~-~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~ 259 (452)
T 3my7_A 185 DDIALILATGGPGMVKA----AY-SSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVY 259 (452)
T ss_dssp TTCCEEEECSCHHHHHH----HH-TSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGH
T ss_pred CCccEEEEECcHHHHHH----HH-hcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHH
Confidence 99999999999997653 33 47899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc---CCCCcccccce-------
Q psy5844 262 DEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA---GDKGFYVQPTV------- 331 (442)
Q Consensus 262 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~---~~~g~~v~pti------- 331 (442)
|+|+++|+++ .||++++.+.+++.++++.+...|+++ .||... ...|+|++||+
T Consensus 260 d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~ 323 (452)
T 3my7_A 260 DEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVPADTKVLIGEG 323 (452)
T ss_dssp HHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCCTTCCEEEEEC
T ss_pred HHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeCCCeeEEeecc
Confidence 9999999865 399999999999999998765567665 466432 13589999998
Q ss_pred eccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcC----CCCceEEEecCCCChhhh---hccccEeeeEEeeCCH
Q psy5844 332 FANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNS----DYGLAAAVFTKDLDKTNY---VTQGLRAGTLIRFSSI 403 (442)
Q Consensus 332 ~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~----~~gl~~~v~s~d~~~~~~---~~~~~~~G~V~vN~~~ 403 (442)
+.++.+++.+.. |+||||+++++|++++|+++++|+. ++||+++|||+|.+...+ +++++++|+|+||++.
T Consensus 324 ~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~ 401 (452)
T 3my7_A 324 LGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPT 401 (452)
T ss_dssp SSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCC
T ss_pred ccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCC
Confidence 677888888664 8999999999999999999999986 599999999999988888 9999999999999965
No 50
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.5e-59 Score=473.45 Aligned_cols=325 Identities=15% Similarity=0.123 Sum_probs=270.1
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHc-------CCChh----hhchhHHHHHHHHHHHHHHhHhhhcCcccccC---C
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDN-------GKPYN----MSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN---G 95 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~-------Gk~~~----~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~---~ 95 (442)
.+.++++.......+.++.+++++++|+ |||+. ++.. |+..+++.+++++..+++..+...+.. .
T Consensus 52 ~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~ 130 (463)
T 2h5g_A 52 QRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSLSTS-KLNSLAIGLRQIAASSQDSVGRVLRRTRIAK 130 (463)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCCCHH-HHHHHHHHHHHHHHHCTTSTTCEEEEEEEET
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhhhhHH-HHHHHHHHHHHHHHhhHhhcCcccccccCCC
Confidence 4455555555555556788899999999 79998 5666 999999999999988766666543321 3
Q ss_pred CcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHh----CCCCCcEEeecCC
Q psy5844 96 DFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA----GIPEGVVNIVPGY 171 (442)
Q Consensus 96 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~a----glp~~~~~~v~~~ 171 (442)
+...++.++|+|||++|+||| |.+.. +++++||++||+||+|||+.+|+++..+++++.++ | |+|++|+++|+
T Consensus 131 ~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~ 207 (463)
T 2h5g_A 131 NLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTR 207 (463)
T ss_dssp TEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTT
T ss_pred CceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCC
Confidence 456789999999999999887 87776 89999999999999999999999999999999999 9 99999999994
Q ss_pred ccchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCC
Q psy5844 172 GDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAG 251 (442)
Q Consensus 172 ~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~ 251 (442)
.++++.|+.||+++.|+||||+.+|+.|++.++ +||+++|+|||||+||++|||++.|++.+++++|.| ||.|+++
T Consensus 208 ~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~ 283 (463)
T 2h5g_A 208 EEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK---GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNAL 283 (463)
T ss_dssp CCC-------CCCSEEEEESCHHHHHHHHHHCS---SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSE
T ss_pred HHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccC
Confidence 388999999999999999999999999999776 899999999999999999999999999999999999 9999999
Q ss_pred CEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccce
Q psy5844 252 SRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTV 331 (442)
Q Consensus 252 ~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti 331 (442)
+|||||++++| ||+ + .++++.++++|++++.|+.. ...++|+
T Consensus 284 ~rvlV~~~i~d-------------------------~p~-----~---~~~i~~~~~~Ga~v~~G~~~-~~~g~~~---- 325 (463)
T 2h5g_A 284 ETLLIHRDLLR-------------------------TPL-----F---DQIIDMLRVEQVKIHAGPKF-ASYLTFS---- 325 (463)
T ss_dssp EEEEEEGGGTT-------------------------SHH-----H---HHHHHHHHHTTCEEEECHHH-HC---------
T ss_pred cEEEEeccccc-------------------------hHH-----H---HHHHHHHHhCCCEEEeCCcc-cccCccC----
Confidence 99999999998 232 2 33577778899999855432 2234443
Q ss_pred eccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844 332 FANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE 404 (442)
Q Consensus 332 ~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~ 404 (442)
++++.++++|+||||+++..|++++|+|+++|+.+++|+++|||+|.+.+.++++++++|.|+||+...
T Consensus 326 ----~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~ 394 (463)
T 2h5g_A 326 ----PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTR 394 (463)
T ss_dssp --------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGG
T ss_pred ----CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCcc
Confidence 456778889999999999999999999999999999999999999999999999999999999998763
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=2.7e-58 Score=468.05 Aligned_cols=327 Identities=19% Similarity=0.195 Sum_probs=267.3
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCCh----hhhch-------hHHHHHHHHHHHHHHhHhhhcCccccc---CC
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPY----NMSYS-------VDVEYSLRTLRYYAGFADKIHGKTIPI---NG 95 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~----~~a~~-------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~ 95 (442)
.+..+++.......+.++.+++++++|+||+. .+++. .|+..+++.+++++.+++.. +...+. +.
T Consensus 49 ~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~~l~~~a~~~~~~-g~~~~~~~~~~ 127 (444)
T 4ghk_A 49 AKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQVATLPDPI-GEMSNLKYRPS 127 (444)
T ss_dssp HHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHHHHHHHHHSCCCT-TCEEEEEECTT
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHHHHHHHHhhcccc-CccCCcccCCC
Confidence 34445555545455667788999999999995 46653 27899999999999877543 443332 24
Q ss_pred CcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHH----HHhCCCCCcEEeecCC
Q psy5844 96 DFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALI----AEAGIPEGVVNIVPGY 171 (442)
Q Consensus 96 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l----~~aglp~~~~~~v~~~ 171 (442)
+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+++++ .++|+|+|++++++|+
T Consensus 128 ~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~ 205 (444)
T 4ghk_A 128 GIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETA 205 (444)
T ss_dssp SCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCC
T ss_pred CccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCC
Confidence 566889999999999999998 8 688999999999999999999999999999999997 7899999999999985
Q ss_pred c--cchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCccc
Q psy5844 172 G--DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCC 249 (442)
Q Consensus 172 ~--~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~ 249 (442)
+ +.++.|..||+++.|+||||+.+|+.+++.+ +||+++|+|||||+||++|||++.|++.+++++|.|+| .|+
T Consensus 206 ~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~ 280 (444)
T 4ghk_A 206 DRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG-TCN 280 (444)
T ss_dssp CTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEECTTCCHHHHHHHCC----------CC
T ss_pred CHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc-ccC
Confidence 4 4788888999999999999999999998864 58999999999999999999999999999999999999 999
Q ss_pred CCCEEEEcCccHHHHHHHHHHHHhhccc---CCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcc
Q psy5844 250 AGSRTFVQDTIYDEFVARSGERAKRRTV---GDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFY 326 (442)
Q Consensus 250 s~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~ 326 (442)
+++|||||++++|+|+++|+++++++++ |+|.+ .++++++. . |
T Consensus 281 a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~~-----------------~~~i~~a~-~--------------G-- 326 (444)
T 4ghk_A 281 TMETLLVARGIAPAVLSPLGRLYREKGVELRVDADA-----------------RAVLEAAG-V--------------G-- 326 (444)
T ss_dssp CCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHHH-----------------HHHHHHTT-C--------------C--
T ss_pred cCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHHH-----------------HHHHHhcc-c--------------C--
Confidence 9999999999999999999999999987 76531 35555432 1 1
Q ss_pred cccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844 327 VQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE 404 (442)
Q Consensus 327 v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~ 404 (442)
++ +..++.++++|+||||++++.|++++|+|+++|++++||+++|||+|.+++.++++++++|.|+||++..
T Consensus 327 ----~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~ 398 (444)
T 4ghk_A 327 ----PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTR 398 (444)
T ss_dssp ----CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGG
T ss_pred ----cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCc
Confidence 11 2345667889999999999999999999999999999999999999999999999999999999999864
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=2.3e-58 Score=466.32 Aligned_cols=325 Identities=18% Similarity=0.163 Sum_probs=279.6
Q ss_pred CCCccccchhhhcCccccHHHHHHHHHcCCCh----hhhch-------hHHHHHHHHHHHHHHhHhhhcCccccc---CC
Q psy5844 30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPY----NMSYS-------VDVEYSLRTLRYYAGFADKIHGKTIPI---NG 95 (442)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~----~~a~~-------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~ 95 (442)
.+.++++.......+.++.+++++++|+|||. .++.. .|+..+++.+++++.++++ .+...+. +.
T Consensus 37 ~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~~l~~~a~~~~~-~g~~~~~~~~~~ 115 (427)
T 1o20_A 37 EKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDP-VGEVIDSWVRED 115 (427)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHHHHHHHHSCCC-TTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHHHHHHHHhcccc-cCccccccccCC
Confidence 45555555555555667888999999999986 56641 3899999999999987765 3544332 23
Q ss_pred CcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHH----HhCCCCCcEEeecCC
Q psy5844 96 DFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIA----EAGIPEGVVNIVPGY 171 (442)
Q Consensus 96 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~----~aglp~~~~~~v~~~ 171 (442)
+...+++++|+|||++|+||| +...++++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+++|.
T Consensus 116 ~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~l~~~al~eaGlP~gvv~vv~g~ 193 (427)
T 1o20_A 116 GLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENT 193 (427)
T ss_dssp SCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCC
T ss_pred CceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHHHHHHHHHHHHcCCCcccEEEecCC
Confidence 455788999999999999885 47899999999999999999999999999999999998 679999999999984
Q ss_pred -c-cchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCccc
Q psy5844 172 -G-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCC 249 (442)
Q Consensus 172 -~-~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~ 249 (442)
. +.++.|..||+++.|+||||+.+|+.|++.+ .||+++|+|||||+||++|||++.|++.+++++|.|+| .|+
T Consensus 194 ~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G-~C~ 268 (427)
T 1o20_A 194 DRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPG-TCN 268 (427)
T ss_dssp CTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTT-STT
T ss_pred ChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhccCCC-CCC
Confidence 4 5788899999999999999999999999875 48999999999999999999999999999999999999 999
Q ss_pred CCCEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCccccc
Q psy5844 250 AGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQP 329 (442)
Q Consensus 250 s~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~p 329 (442)
+++|||||++++|+|+++|.+.+++++++ +.||.+. .+ |+ |
T Consensus 269 a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-----------------------------------~~gg~~~--~~-~~-P 309 (427)
T 1o20_A 269 AAEKLLVHEKIAKEFLPVIVEELRKHGVE-----------------------------------VRGCEKT--RE-IV-P 309 (427)
T ss_dssp SEEEEEEEHHHHHHHHHHHHHHHHHTTCE-----------------------------------EEECHHH--HH-HS-T
T ss_pred CccEEEEehhhHHHHHHHHHHHHHHcCCe-----------------------------------eecChhh--hh-hC-C
Confidence 99999999999999999999999987642 1122211 12 33 8
Q ss_pred ceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844 330 TVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE 404 (442)
Q Consensus 330 ti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~ 404 (442)
|+. ..++.++++|+||||+++.+|++++|+|+++|+.+|||+++|||+|.+.+.++++++++|.|+||+...
T Consensus 310 tl~---~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~ 381 (427)
T 1o20_A 310 DVV---PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTR 381 (427)
T ss_dssp TSE---ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGG
T ss_pred ccc---CCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCc
Confidence 863 345678899999999999999999999999999999999999999999999999999999999998764
No 53
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=99.26 E-value=2.9e-12 Score=130.98 Aligned_cols=124 Identities=26% Similarity=0.416 Sum_probs=104.3
Q ss_pred cccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc------------------
Q psy5844 318 GRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN------------------ 368 (442)
Q Consensus 318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~------------------ 368 (442)
.|...+..+|+..++++|...+....+++ +||+++-..++.+.+.|+.+..
T Consensus 285 ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~ 364 (490)
T 2wme_A 285 VCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFG 364 (490)
T ss_dssp CTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGG
T ss_pred cCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCccccc
Confidence 33344557999999988887776555543 7999999999998888887621
Q ss_pred CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 369 SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 369 ~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
.++.+.++|++ |.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++++++++|++|+||
T Consensus 365 ~G~~~~Ptvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~ 440 (490)
T 2wme_A 365 KGAYVAPTVFT-DCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICW 440 (490)
T ss_dssp GTTCBCCEEEE-SCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEE
T ss_pred CCCccCCEEEE-cCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEE
Confidence 24567889998 77888999999999975 778999999999999999999999999999999999999999986
No 54
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=99.15 E-value=1.7e-11 Score=125.15 Aligned_cols=119 Identities=24% Similarity=0.358 Sum_probs=98.3
Q ss_pred CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc---------------CCCCceEE
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN---------------SDYGLAAA 376 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~---------------~~~gl~~~ 376 (442)
+..+|+..+++++...+....+. .+||++.-..++.+++.++.+.. .++.+.++
T Consensus 270 ~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Pt 349 (474)
T 4h7n_A 270 ERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPT 349 (474)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCE
T ss_pred ccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCce
Confidence 44688888888877666544333 37899998888888888876632 13446778
Q ss_pred EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
|++ |.+..+.+++++.||+| +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 350 v~~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~ 417 (474)
T 4h7n_A 350 VMT-NVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAIS 417 (474)
T ss_dssp EEE-SCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEE
T ss_pred eEE-eeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEE
Confidence 887 77888999999999965 778999999999999999999999999999999999999999985
No 55
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=99.14 E-value=2.8e-11 Score=124.22 Aligned_cols=120 Identities=25% Similarity=0.401 Sum_probs=100.6
Q ss_pred CCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc---------------CCCCceE
Q psy5844 322 DKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN---------------SDYGLAA 375 (442)
Q Consensus 322 ~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~---------------~~~gl~~ 375 (442)
.+..+|+..++++|...+....+++ +||+++-..++.+.+.++.+.. .++.+.+
T Consensus 293 ~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~P 372 (506)
T 3rh9_A 293 ANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPP 372 (506)
T ss_dssp CCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCC
T ss_pred CcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECC
Confidence 3456888888888877766555543 6899999999998888887521 3455678
Q ss_pred EEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 376 AVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
+|++ |.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 373 Tvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~ 441 (506)
T 3rh9_A 373 TVVQ-GVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVG 441 (506)
T ss_dssp EEEE-CCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEE
T ss_pred eEEc-cCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEE
Confidence 9998 67778899999999975 778999999999999999999999999999999999999999985
No 56
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=99.14 E-value=2.4e-11 Score=124.24 Aligned_cols=123 Identities=25% Similarity=0.393 Sum_probs=101.1
Q ss_pred ccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCCCc
Q psy5844 319 RAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDYGL 373 (442)
Q Consensus 319 ~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~gl 373 (442)
|...+..+|+..++++|...+....+++ +||+++-..++.+.+.++.+.. .++.+
T Consensus 291 C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~ 370 (484)
T 3ifg_A 291 CVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFF 370 (484)
T ss_dssp TTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCB
T ss_pred ccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceE
Confidence 3333456888888888877665554443 6899998888888888876521 35567
Q ss_pred eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
.++|++ |.+..+.+++++.||+| +.+++.+|+++.+|+++|||++||||+|..++++++++|++|+||
T Consensus 371 ~PTvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~ 441 (484)
T 3ifg_A 371 EPTVLT-GVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVG 441 (484)
T ss_dssp CCEEEE-EECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEE
T ss_pred cCEEEe-cCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence 889997 66777899999999975 678999999999999999999999999999999999999999985
No 57
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=99.13 E-value=1.8e-11 Score=125.62 Aligned_cols=119 Identities=25% Similarity=0.408 Sum_probs=98.5
Q ss_pred CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhcC------------CCCceEEEec
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANNS------------DYGLAAAVFT 379 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~~------------~~gl~~~v~s 379 (442)
+..+|+..++++|...+....+++ +||+++-..++.+.+.++.+... ++.+.++|++
T Consensus 315 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~g~~~~PTvl~ 394 (504)
T 3ek1_A 315 NRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGLFFEPGILT 394 (504)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEEETTEECCEEEE
T ss_pred CEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCeEEe
Confidence 345778888877776665544443 78999988899888888876422 3556788887
Q ss_pred CCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 380 KDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 380 ~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
|.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.+++++|++|+||
T Consensus 395 -~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~ 459 (504)
T 3ek1_A 395 -GVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVG 459 (504)
T ss_dssp -EECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEE
T ss_pred -cCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEE
Confidence 67777899999999975 678999999999999999999999999999999999999999985
No 58
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=99.13 E-value=3.3e-11 Score=123.07 Aligned_cols=126 Identities=21% Similarity=0.299 Sum_probs=103.6
Q ss_pred CCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHh--------------cCC
Q psy5844 316 GGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERAN--------------NSD 370 (442)
Q Consensus 316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an--------------~~~ 370 (442)
|..|...+..+|+..++++|...+....+++ +||+++...++.+.+.++.+. ..+
T Consensus 262 GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g 341 (484)
T 3ros_A 262 GQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKG 341 (484)
T ss_dssp GCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSS
T ss_pred CCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCC
Confidence 3344444557888888888877766555443 689999999999888888763 234
Q ss_pred CCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 371 YGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 371 ~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
+.+.++|++ |.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 342 ~~~~PTvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~ 415 (484)
T 3ros_A 342 AFFRPTILT-DIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTV 415 (484)
T ss_dssp CCCCCEEEE-CCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCE
T ss_pred ceeCCeEee-cCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEE
Confidence 567788988 77778899999999975 678999999999999999999999999999999999999999985
No 59
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=99.12 E-value=3.5e-11 Score=123.33 Aligned_cols=121 Identities=21% Similarity=0.384 Sum_probs=100.8
Q ss_pred CCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc-----------------CCCC
Q psy5844 321 GDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN-----------------SDYG 372 (442)
Q Consensus 321 ~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~-----------------~~~g 372 (442)
..+..+|+..++++|...+....+++ +||+++-..++.+++.++.+.. .++.
T Consensus 305 a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~ 384 (497)
T 3i44_A 305 APTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYY 384 (497)
T ss_dssp CCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCC
T ss_pred cCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcE
Confidence 33456888899888887766544432 6899999999998888886521 2455
Q ss_pred ceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 373 LAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 373 l~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
+.++|++ |.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.+++++|++|+||
T Consensus 385 ~~PTvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~ 456 (497)
T 3i44_A 385 VRPTVFA-DVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVE 456 (497)
T ss_dssp CCCEEEE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEE
T ss_pred ECCEEEE-eCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEE
Confidence 7788998 77778899999999975 678999999999999999999999999999999999999999985
No 60
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=99.12 E-value=2.6e-11 Score=124.86 Aligned_cols=121 Identities=29% Similarity=0.404 Sum_probs=98.2
Q ss_pred CCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHh------------------cCCC
Q psy5844 321 GDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERAN------------------NSDY 371 (442)
Q Consensus 321 ~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an------------------~~~~ 371 (442)
..+..+|+..++++|...+....++ .+||++.-..++.+++.++.+. ..++
T Consensus 315 a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~ 394 (520)
T 3ed6_A 315 AGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGL 394 (520)
T ss_dssp CCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTT
T ss_pred cCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCc
Confidence 3344677777777776665544333 2688888888888888887652 1345
Q ss_pred CceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 372 GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 372 gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
.+.++|++ |.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.+++++|++|+||
T Consensus 395 f~~PTvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~ 467 (520)
T 3ed6_A 395 FFEPTVIT-NCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVW 467 (520)
T ss_dssp CCCCEEEE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEE
T ss_pred eECCeEEe-cCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEE
Confidence 67889998 77778899999999975 678999999999999999999999999999999999999999985
No 61
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=99.11 E-value=3.7e-11 Score=122.93 Aligned_cols=119 Identities=26% Similarity=0.431 Sum_probs=98.0
Q ss_pred CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCCCceEEE
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAV 377 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v 377 (442)
+..+|+..++++|...+....+++ +||+++-..++.+.+.++.+.. .++.+.++|
T Consensus 292 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv 371 (481)
T 3jz4_A 292 NRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTI 371 (481)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEE
T ss_pred cEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEE
Confidence 345778888877776665544443 6899988888888888876521 235678899
Q ss_pred ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 378 FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 378 ~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
++ |.+..+.+++++.||+| +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 372 l~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~ 438 (481)
T 3jz4_A 372 LV-DVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVG 438 (481)
T ss_dssp EE-SCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEE
T ss_pred Ee-cCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEE
Confidence 98 67778899999999975 678999999999999999999999999999999999999999985
No 62
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=99.11 E-value=3.6e-11 Score=123.52 Aligned_cols=119 Identities=24% Similarity=0.417 Sum_probs=99.4
Q ss_pred CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc----------------CCCCceE
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN----------------SDYGLAA 375 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~----------------~~~gl~~ 375 (442)
+..+|+..++++|...+....++ .+||+++-..++.+.+.++.+.. .++.+.+
T Consensus 298 ~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~P 377 (503)
T 3iwj_A 298 SRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEP 377 (503)
T ss_dssp EEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCC
T ss_pred CeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCC
Confidence 44688888888877766554444 27899998889988888876531 2455778
Q ss_pred EEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 376 AVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
+|++ |.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..+++++++++++|+||
T Consensus 378 Tvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~ 446 (503)
T 3iwj_A 378 TIIT-DVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVW 446 (503)
T ss_dssp EEEE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEE
T ss_pred eeee-cCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEE
Confidence 9998 77788999999999975 678999999999999999999999999999999999999999985
No 63
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=99.11 E-value=3.4e-11 Score=123.63 Aligned_cols=119 Identities=29% Similarity=0.375 Sum_probs=98.8
Q ss_pred CCcccccceeccCcchhHHHHHh----------hcCCcccccccCCHHHHHHHHhc-----------CCCCceEEEecCC
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREE----------IFGPVQQLIRFSSIEEVIERANN-----------SDYGLAAAVFTKD 381 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e----------~fgPvl~v~~~~~~~eai~~an~-----------~~~gl~~~v~s~d 381 (442)
+..+|+..++++|...+....++ .+||++.-..++.+.+.++.+.. .++.+.++|++ |
T Consensus 297 ~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~g~~~~PTvl~-~ 375 (505)
T 3prl_A 297 KRVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNLLSPTLLD-D 375 (505)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEE-S
T ss_pred ceEEEeHHHHHHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCCCCceeCCeEee-c
Confidence 34577888887777666544444 36899999999998888887643 24556789998 7
Q ss_pred CChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 382 LDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 382 ~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 376 v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~ 439 (505)
T 3prl_A 376 VTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVH 439 (505)
T ss_dssp CCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEE
T ss_pred CCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEE
Confidence 7788899999999975 778999999999999999999999999999999999999999985
No 64
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=99.10 E-value=3.7e-11 Score=122.38 Aligned_cols=123 Identities=20% Similarity=0.273 Sum_probs=97.9
Q ss_pred ccCCCCcccccceeccCcchhHHHHHhh----------cCCcccccccCCHHHHHHHH--------hcCCCCceEEEecC
Q psy5844 319 RAGDKGFYVQPTVFANVRDDMKIAREEI----------FGPVQQLIRFSSIEEVIERA--------NNSDYGLAAAVFTK 380 (442)
Q Consensus 319 ~~~~~g~~v~pti~~~~~~~~~~~~~e~----------fgPvl~v~~~~~~~eai~~a--------n~~~~gl~~~v~s~ 380 (442)
|...+..+|+..++++|...+....+++ +||+++-..++.+.+.++-+ ...++.+.++|++
T Consensus 260 C~a~~rvlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~i~ga~v~~GG~~~~~g~~~~PTvl~- 338 (469)
T 3sza_A 260 CVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVAYGGTGDAATRYIAPTILT- 338 (469)
T ss_dssp TTSCCEEEECGGGHHHHHHHHHHHHHHHHCSCGGGCTTCCCCSCHHHHHHHHHHHTTSEEEECCCEETTTTEECCEEEE-
T ss_pred CCCCcEEEEehhHHHHHHHHHHHHHHHhcCCCCcccCcccccCCHHHHHHHHHHHcCCEEEeCCccCCCCceeCCeeec-
Confidence 3333456888899888877665444432 68888877777777776311 1134567789998
Q ss_pred CCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 381 DLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 381 d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
|.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 339 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~ 403 (469)
T 3sza_A 339 DVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVA 403 (469)
T ss_dssp SCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEE
T ss_pred CCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence 77888999999999975 678999999999999999999999999999999999999999985
No 65
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=99.09 E-value=4.7e-11 Score=123.21 Aligned_cols=119 Identities=17% Similarity=0.323 Sum_probs=99.6
Q ss_pred CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc---------------CCCCceEE
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN---------------SDYGLAAA 376 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~---------------~~~gl~~~ 376 (442)
+..+|+..++++|...+....++ .+||++.-..++.+.+.++.+.. .++.+.++
T Consensus 308 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PT 387 (528)
T 3u4j_A 308 SRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPT 387 (528)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCE
T ss_pred CEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecce
Confidence 34688888888887766554443 26899999999999888887632 34556788
Q ss_pred EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
|++ |.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 388 vl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~ 455 (528)
T 3u4j_A 388 VFA-GVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCW 455 (528)
T ss_dssp EEE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEE
T ss_pred EEe-cCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEE
Confidence 887 67778899999999975 678999999999999999999999999999999999999999985
No 66
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=99.09 E-value=3.6e-11 Score=123.71 Aligned_cols=118 Identities=28% Similarity=0.548 Sum_probs=95.8
Q ss_pred CcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc--------------CCCCceEEEe
Q psy5844 324 GFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAVF 378 (442)
Q Consensus 324 g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v~ 378 (442)
..+|+..++++|...+....++ .+||+++-..++.+.+.++.+.. .++.+.++|+
T Consensus 327 rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl 406 (517)
T 2o2p_A 327 RLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVF 406 (517)
T ss_dssp EEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEE
T ss_pred EEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEE
Confidence 3577777776666555443332 26899998888888888876521 2456788999
Q ss_pred cCCCChhhhhccccEeeeE---EeeCC--HHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 379 TKDLDKTNYVTQGLRAGTL---IRFSS--IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 379 s~d~~~~~~~~~~~~~G~V---~vN~~--~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
+ |.+..+.+++++.||+| +.+++ .+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 407 ~-~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~ 474 (517)
T 2o2p_A 407 T-DVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVF 474 (517)
T ss_dssp E-SCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEE
T ss_pred e-CCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEE
Confidence 8 77778999999999975 66888 9999999999999999999999999999999999999985
No 67
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=99.07 E-value=6.6e-11 Score=121.40 Aligned_cols=119 Identities=38% Similarity=0.601 Sum_probs=98.5
Q ss_pred CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCCCceEEE
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAV 377 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v 377 (442)
+..+|+..++++|...+....+++ +||+++-..++.+++.++.+.. .++.+.++|
T Consensus 306 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTv 385 (500)
T 1o04_A 306 SRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTV 385 (500)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEE
T ss_pred CEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEE
Confidence 346888888887777665544443 6899999999998888876521 245577899
Q ss_pred ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 378 FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 378 ~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
++ |.+..+.+++++.||+| +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 386 l~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~ 452 (500)
T 1o04_A 386 FG-DVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVW 452 (500)
T ss_dssp EE-SCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred Ee-CCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEE
Confidence 97 67777899999999975 678999999999999999999999999999999999999999985
No 68
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=99.07 E-value=4.9e-11 Score=123.32 Aligned_cols=124 Identities=20% Similarity=0.356 Sum_probs=101.2
Q ss_pred cccCCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc-------------CCCCc
Q psy5844 318 GRAGDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN-------------SDYGL 373 (442)
Q Consensus 318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~-------------~~~gl 373 (442)
.|...+..+|+..++++|...+....++ .+||++.-..++.+.+.++.+.. .++.+
T Consensus 320 ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~~~~gG~~~~~~g~~~ 399 (538)
T 3qan_A 320 KCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFI 399 (538)
T ss_dssp STTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEECCCEECSSSCEE
T ss_pred CCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCCeEEeCCCcCCCCCcee
Confidence 3333445688888888877666544433 26899998888888888876531 35667
Q ss_pred eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
.++|++ |.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 400 ~PTvl~-~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~ 470 (538)
T 3qan_A 400 QPTIIA-DLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLY 470 (538)
T ss_dssp CCEEEE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEE
T ss_pred CCeeee-cCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEE
Confidence 889998 66777899999999975 678999999999999999999999999999999999999999985
No 69
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=99.07 E-value=9e-11 Score=120.37 Aligned_cols=120 Identities=26% Similarity=0.425 Sum_probs=98.5
Q ss_pred CCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHh------------------cCCCC
Q psy5844 322 DKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERAN------------------NSDYG 372 (442)
Q Consensus 322 ~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an------------------~~~~g 372 (442)
.+..+|+..++++|...+....++ .+||+++...++.+.+.++.+. ..++.
T Consensus 289 ~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~ 368 (490)
T 2ve5_A 289 GTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAY 368 (490)
T ss_dssp CCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTC
T ss_pred CCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCce
Confidence 345688888888777666544443 2688888888888888887652 13456
Q ss_pred ceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 373 LAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 373 l~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
+.++|++ |.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 369 ~~Ptvl~-~v~~~~~i~~eEiFGPvl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~ 440 (490)
T 2ve5_A 369 VAPTVFT-DCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICW 440 (490)
T ss_dssp BCCEEEE-SCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEE
T ss_pred EccEEEe-cCCCCCccccceeeCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEE
Confidence 7889998 67778899999999975 678999999999999999999999999999999999999999985
No 70
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=99.07 E-value=6e-11 Score=121.72 Aligned_cols=119 Identities=24% Similarity=0.410 Sum_probs=97.4
Q ss_pred CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc------------------CCCCc
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN------------------SDYGL 373 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~------------------~~~gl 373 (442)
+..+|+..++++|...+....+++ +||++.-..++.+.+.++.+.. .++.+
T Consensus 295 ~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~ 374 (497)
T 3k2w_A 295 ERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWY 374 (497)
T ss_dssp EEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCC
T ss_pred cEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCcee
Confidence 346788888877776665444433 6888888888888887776521 35567
Q ss_pred eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
.++|++ |.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 375 ~Ptvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~ 445 (497)
T 3k2w_A 375 EPTVLV-DVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVY 445 (497)
T ss_dssp CCEEEE-SCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred CCEEEe-cCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEE
Confidence 889998 67778899999999975 778999999999999999999999999999999999999999985
No 71
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=99.06 E-value=4.9e-11 Score=122.86 Aligned_cols=118 Identities=18% Similarity=0.217 Sum_probs=96.2
Q ss_pred Ccccccc-eeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHh------------------cCCCCc
Q psy5844 324 GFYVQPT-VFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERAN------------------NSDYGL 373 (442)
Q Consensus 324 g~~v~pt-i~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an------------------~~~~gl 373 (442)
..+|+.. ++++|...+....+++ +||++.-..++.+.+.++.+. ..++.+
T Consensus 309 rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~ 388 (521)
T 4e4g_A 309 VAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFI 388 (521)
T ss_dssp EEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCC
T ss_pred EEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEE
Confidence 3577777 7777766665444443 688888888888888777652 134567
Q ss_pred eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
.++|++ |.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 389 ~PTvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~ 459 (521)
T 4e4g_A 389 GGCLFD-DVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVG 459 (521)
T ss_dssp CCEEEE-SCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEE
T ss_pred CCEEEE-cCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEE
Confidence 889998 77778899999999976 568899999999999999999999999999999999999999985
No 72
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=99.06 E-value=9.3e-11 Score=120.43 Aligned_cols=127 Identities=23% Similarity=0.415 Sum_probs=102.0
Q ss_pred eCCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc---------------
Q psy5844 315 AGGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------- 368 (442)
Q Consensus 315 ~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------- 368 (442)
.|..|...+..+|+..++++|...+....+++ +||+++-..++.+++.++.+..
T Consensus 293 ~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~ 372 (503)
T 1a4s_A 293 QGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPS 372 (503)
T ss_dssp GGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCS
T ss_pred CCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccc
Confidence 34444444557888888888777665554443 5899998889988888876521
Q ss_pred -----CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccc
Q psy5844 369 -----SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 440 (442)
Q Consensus 369 -----~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~ 440 (442)
.++.+.++|++ |.+..+.+++++.||+| +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+
T Consensus 373 ~~~~~~g~~~~PTvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~ 451 (503)
T 1a4s_A 373 DPKLKNGYFMSPCVLD-NCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGT 451 (503)
T ss_dssp SGGGTTSCCBCCEEEE-SCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSE
T ss_pred cccccCCceeCCEEEe-cCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeE
Confidence 24456788987 67777899999999975 6789999999999999999999999999999999999999999
Q ss_pred cC
Q psy5844 441 VW 442 (442)
Q Consensus 441 v~ 442 (442)
||
T Consensus 452 V~ 453 (503)
T 1a4s_A 452 CY 453 (503)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 73
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=99.06 E-value=6.6e-11 Score=120.25 Aligned_cols=119 Identities=18% Similarity=0.256 Sum_probs=99.8
Q ss_pred CCcccccceeccCcchhHHHHHhh------cCCcccccccCCHHHHHHHHh----------cCCCCceEEEecCCCChhh
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREEI------FGPVQQLIRFSSIEEVIERAN----------NSDYGLAAAVFTKDLDKTN 386 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e~------fgPvl~v~~~~~~~eai~~an----------~~~~gl~~~v~s~d~~~~~ 386 (442)
+..+|+..++++|...+....+++ +||+++-..++.+++.++.+. ..++.+.++|++ |.+..+
T Consensus 274 ~rvlV~~~i~d~f~~~l~~~~~~~~p~~~~~gpli~~~~~~rv~~~i~~a~~~~~~gg~~~~~g~~~~Ptvl~-~v~~~~ 352 (457)
T 3lns_A 274 DYLYVHYSVKDALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLEATQGQVLVGSQADVSKRALSATVVD-GVEWND 352 (457)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHHCCSTTTTCCCSSHHHHHHHHHHHHHCCSEEEECCCEEGGGTEECCEEEE-SCCTTS
T ss_pred ceEEEcHHHHHHHHHHHHHHHHhcCCCcccccCCCCHHHHHHHHHHHHhcCCeEEeCCccCCCCceeCCEEEe-cCCCCC
Confidence 346888899888887776555554 789999888888888888731 124456788988 677788
Q ss_pred hhccccEeeeE---EeeCCHHHHHHhhcc-CCccceeEEeccChhHHHHHHccccccccC
Q psy5844 387 YVTQGLRAGTL---IRFSSIEEVIERANN-SDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 387 ~~~~~~~~G~V---~vN~~~~~av~~an~-~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
.+++++.||+| +.+++.+||++.+|+ ++|||++||||+|..++.++++++++|+||
T Consensus 353 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~ 412 (457)
T 3lns_A 353 PLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQ 412 (457)
T ss_dssp GGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEE
T ss_pred hhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEE
Confidence 99999999975 678999999999999 999999999999999999999999999985
No 74
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=99.05 E-value=1.1e-10 Score=119.54 Aligned_cols=117 Identities=26% Similarity=0.409 Sum_probs=97.2
Q ss_pred cccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhcC-----------CCCceEEEecCCC
Q psy5844 325 FYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANNS-----------DYGLAAAVFTKDL 382 (442)
Q Consensus 325 ~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~~-----------~~gl~~~v~s~d~ 382 (442)
.+|+..++++|...+....++ .+||+++-..++.+.+.++.+... ++.+.++|++ |.
T Consensus 293 vlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~-~v 371 (485)
T 4dng_A 293 IIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGNVLTPYVFV-GA 371 (485)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEE-SC
T ss_pred EEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCcEECCEEEe-cC
Confidence 578888887777666544443 268899888888888888876432 4556788887 77
Q ss_pred ChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 383 DKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 383 ~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 372 ~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~ 434 (485)
T 4dng_A 372 DNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTH 434 (485)
T ss_dssp CTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEE
T ss_pred CCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEE
Confidence 788899999999975 678999999999999999999999999999999999999999985
No 75
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=99.05 E-value=5e-11 Score=122.66 Aligned_cols=119 Identities=29% Similarity=0.496 Sum_probs=98.7
Q ss_pred CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc-----------------CCCCce
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN-----------------SDYGLA 374 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~-----------------~~~gl~ 374 (442)
+..+|+..++++|...+....++ .+||+++-..++.+.+.|+.+.. .++.+.
T Consensus 296 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~ 375 (517)
T 3r31_A 296 TRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQ 375 (517)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCC
T ss_pred ceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceEC
Confidence 44688888888877766554444 36899998899988888877521 245567
Q ss_pred EEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 375 AAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 375 ~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
++|++ |.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 376 PTvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~ 445 (517)
T 3r31_A 376 PTVFA-DVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLW 445 (517)
T ss_dssp CEEEE-EECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEE
T ss_pred CEEEe-cCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEE
Confidence 88887 66677899999999975 778999999999999999999999999999999999999999985
No 76
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=99.05 E-value=8.2e-11 Score=120.68 Aligned_cols=119 Identities=29% Similarity=0.545 Sum_probs=96.3
Q ss_pred CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc--------------CCCCceEEE
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAV 377 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v 377 (442)
+..+|+..++++|...+....++ .+||+++-..++.+++.++.+.. .++.+.++|
T Consensus 307 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTv 386 (501)
T 1bxs_A 307 SRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTV 386 (501)
T ss_dssp CEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEE
T ss_pred CEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEE
Confidence 44577777777776665544333 25899998888888888876521 244567788
Q ss_pred ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 378 FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 378 ~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
++ |.+..+.+++++.||+| +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 387 l~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~ 453 (501)
T 1bxs_A 387 FS-DVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVW 453 (501)
T ss_dssp EE-SCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEE
T ss_pred Ee-cCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEE
Confidence 87 66777899999999975 778999999999999999999999999999999999999999985
No 77
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=99.05 E-value=3e-11 Score=123.86 Aligned_cols=119 Identities=24% Similarity=0.445 Sum_probs=97.0
Q ss_pred CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc---------------CCCCceEE
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN---------------SDYGLAAA 376 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~---------------~~~gl~~~ 376 (442)
+..+|+..++++|...+....++ .+||++.-..++.+.+.++.+.. .++.+.++
T Consensus 307 ~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PT 386 (498)
T 4f3x_A 307 CRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPT 386 (498)
T ss_dssp EEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCE
T ss_pred ceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCE
Confidence 44677778877777665544333 26899998888888888876532 23456779
Q ss_pred EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
|++ |.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.+++++|++|+||
T Consensus 387 vl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~ 454 (498)
T 4f3x_A 387 VVA-GATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTW 454 (498)
T ss_dssp EEE-SCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred Eee-cCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence 998 67777899999999975 678999999999999999999999999999999999999999985
No 78
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=99.04 E-value=1e-10 Score=119.95 Aligned_cols=119 Identities=24% Similarity=0.362 Sum_probs=98.1
Q ss_pred CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc----------------CCCCceE
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN----------------SDYGLAA 375 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~----------------~~~gl~~ 375 (442)
+..+|+..++++|...+....+++ +||+++-..++.+++.++.+.. .++.+.+
T Consensus 292 ~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~P 371 (495)
T 3b4w_A 292 TRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQP 371 (495)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCC
T ss_pred eEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCC
Confidence 346888888888777665544443 6899999889998888876521 2445678
Q ss_pred EEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 376 AVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
+|++ |.+..+.+++++.||+| +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 372 Tvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~ 440 (495)
T 3b4w_A 372 TVFA-DVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYG 440 (495)
T ss_dssp EEEE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCE
T ss_pred EEec-CCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEE
Confidence 8887 66777899999999975 778999999999999999999999999999999999999999985
No 79
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=99.04 E-value=9e-11 Score=120.75 Aligned_cols=123 Identities=26% Similarity=0.346 Sum_probs=100.0
Q ss_pred ccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhcC-----------CCCceEE
Q psy5844 319 RAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANNS-----------DYGLAAA 376 (442)
Q Consensus 319 ~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~~-----------~~gl~~~ 376 (442)
|...+..+|+..++++|...+....+++ +||+++-..++.+++.++.+... ++.+.++
T Consensus 294 C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Pt 373 (508)
T 3r64_A 294 CMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRLVHPH 373 (508)
T ss_dssp TTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCEETTEECCE
T ss_pred cccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCcEEecE
Confidence 3333456888888877776665544442 78999998999988888876432 3446778
Q ss_pred EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
|++ |.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 374 vl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~ 441 (508)
T 3r64_A 374 VFS-DVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVH 441 (508)
T ss_dssp EEE-EECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEE
T ss_pred EEe-cCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEE
Confidence 887 66777899999999975 678999999999999999999999999999999999999999985
No 80
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=99.03 E-value=1.1e-10 Score=120.36 Aligned_cols=119 Identities=22% Similarity=0.389 Sum_probs=96.3
Q ss_pred CCcccccceeccCcchhHHHHHh----------hcCCcccccccCCHHHHHHHHhc-------------CCCCceEEEec
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREE----------IFGPVQQLIRFSSIEEVIERANN-------------SDYGLAAAVFT 379 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e----------~fgPvl~v~~~~~~~eai~~an~-------------~~~gl~~~v~s 379 (442)
+..+|+..++++|...+....++ .+||+++-..++.+.+.++.+.. .++.+.++|++
T Consensus 326 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~ 405 (516)
T 1uzb_A 326 SRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFT 405 (516)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCCEEEE
T ss_pred cEEEEchHHHHHHHHHHHHHHHhccCCCCccccccCCCCCHHHHHHHHHHHHHHHHCCCEEECCccCCCCCcEECCEEEE
Confidence 33577777777666655444333 36899998888888888876521 24557788987
Q ss_pred CCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 380 KDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 380 ~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
|.+..+.+++++.||+| +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 406 -~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~ 470 (516)
T 1uzb_A 406 -EVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLY 470 (516)
T ss_dssp -SCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEE
T ss_pred -CCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEE
Confidence 67778899999999975 678999999999999999999999999999999999999999985
No 81
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=99.03 E-value=8.4e-11 Score=120.18 Aligned_cols=117 Identities=23% Similarity=0.374 Sum_probs=96.5
Q ss_pred CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc-----------CCCCceEEEecC
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN-----------SDYGLAAAVFTK 380 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~-----------~~~gl~~~v~s~ 380 (442)
+..+|+..++++|...+....+++ +||+++-..++.+.+.++.+.. .++.+.++|+
T Consensus 279 ~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Ptvl-- 356 (486)
T 3pqa_A 279 GMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKALFYPTIL-- 356 (486)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEE--
T ss_pred cEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCCCCcEeccEEE--
Confidence 346888888887776665544432 6899998899998888887632 2345678888
Q ss_pred CCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 381 DLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 381 d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
|.+..+.+++++.||+| +.+++ +||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 357 ~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~ 420 (486)
T 3pqa_A 357 EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVV 420 (486)
T ss_dssp ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEE
T ss_pred eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEE
Confidence 77788899999999975 66788 999999999999999999999999999999999999985
No 82
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=99.03 E-value=1.5e-10 Score=118.47 Aligned_cols=119 Identities=23% Similarity=0.301 Sum_probs=97.9
Q ss_pred CCcccccceeccCcchhHHHHHh-h-----------cCCcccccccCCHHHHHHHHhc-------------CCC-CceEE
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREE-I-----------FGPVQQLIRFSSIEEVIERANN-------------SDY-GLAAA 376 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e-~-----------fgPvl~v~~~~~~~eai~~an~-------------~~~-gl~~~ 376 (442)
+..+|+..++++|...+....++ + +||+++-..++.+++.++.+.+ .++ .+.++
T Consensus 296 ~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~Pt 375 (487)
T 2w8n_A 296 NQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPT 375 (487)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCTTCTTCBCCE
T ss_pred CEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCceECCE
Confidence 34577888887777766555555 3 6889998888888888887531 144 56788
Q ss_pred EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
|++ |.+..+.+++++.||+| ..+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 376 vl~-~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~ 443 (487)
T 2w8n_A 376 LLC-NVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVG 443 (487)
T ss_dssp EEE-EECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEE
T ss_pred EEe-cCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEE
Confidence 887 66677899999999975 678999999999999999999999999999999999999999985
No 83
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=99.02 E-value=1.5e-10 Score=118.77 Aligned_cols=119 Identities=22% Similarity=0.370 Sum_probs=96.7
Q ss_pred CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCCCceEEE
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAV 377 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v 377 (442)
+..+|+..++++|...+....+++ +||+++-..++.+.+.++.+.. .++.+.++|
T Consensus 307 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTv 386 (500)
T 2j6l_A 307 RRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTI 386 (500)
T ss_dssp EEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEE
T ss_pred cEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEE
Confidence 345777778777776665444443 6889998888888888877531 244567889
Q ss_pred ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHH--ccccccccC
Q psy5844 378 FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVT--QGLRAGTVW 442 (442)
Q Consensus 378 ~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~--~~l~~G~v~ 442 (442)
++ |.+..+.+++++.||+| +.+++.+|+++.+|+++|||++||||+|..++.+++ .++++|+||
T Consensus 387 l~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~ 455 (500)
T 2j6l_A 387 VT-GLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVN 455 (500)
T ss_dssp EE-SCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEE
T ss_pred EE-CCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEE
Confidence 97 66678899999999965 778999999999999999999999999999999999 779999985
No 84
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=99.02 E-value=1.8e-10 Score=117.83 Aligned_cols=124 Identities=22% Similarity=0.431 Sum_probs=98.6
Q ss_pred cccCCCCcccccceeccCcchhHHHHHh------------hcCCcccccccCCHHHHHHHHhc--------------CCC
Q psy5844 318 GRAGDKGFYVQPTVFANVRDDMKIAREE------------IFGPVQQLIRFSSIEEVIERANN--------------SDY 371 (442)
Q Consensus 318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e------------~fgPvl~v~~~~~~~eai~~an~--------------~~~ 371 (442)
.|...+..+|+..++++|...+....++ .+||+++-..++.+++.++.+.+ .++
T Consensus 284 ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~ 363 (479)
T 2imp_A 284 VCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGY 363 (479)
T ss_dssp CSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSC
T ss_pred cCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCc
Confidence 3433445677888877777666544433 25888888888888888876521 134
Q ss_pred CceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 372 GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 372 gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
.+.++|++ |.+..+.+++++.||+| +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 364 ~~~Ptvl~-~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~ 436 (479)
T 2imp_A 364 YYPPTLLL-DVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETY 436 (479)
T ss_dssp CCCCEEEE-SCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEE
T ss_pred eECCEEEe-CCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEE
Confidence 56788887 67777899999999975 678999999999999999999999999999999999999999985
No 85
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=99.02 E-value=2.1e-10 Score=117.22 Aligned_cols=120 Identities=23% Similarity=0.398 Sum_probs=98.3
Q ss_pred CCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHh-----------------cCCCCc
Q psy5844 322 DKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERAN-----------------NSDYGL 373 (442)
Q Consensus 322 ~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an-----------------~~~~gl 373 (442)
.+..+|+..++++|...+....+++ +||+++-..++.+++.++.+. ..++.+
T Consensus 285 ~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~ 364 (478)
T 3ty7_A 285 GTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFA 364 (478)
T ss_dssp CCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCC
T ss_pred CCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCcee
Confidence 3446888888887777665544432 689999888888888887652 124456
Q ss_pred eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
.++|++ |....+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 365 ~Ptvl~-~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~ 435 (478)
T 3ty7_A 365 RPTIFI-NVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVE 435 (478)
T ss_dssp CCEEEE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEE
T ss_pred CCEEEe-cCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEE
Confidence 788887 67777889999999975 678999999999999999999999999999999999999999985
No 86
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=99.02 E-value=1.2e-10 Score=119.26 Aligned_cols=124 Identities=24% Similarity=0.464 Sum_probs=100.3
Q ss_pred cccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc---------------CCC
Q psy5844 318 GRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN---------------SDY 371 (442)
Q Consensus 318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~---------------~~~ 371 (442)
.|...+..+|+..++++|...+....+++ +||+++-..++.+++.++.+.. .++
T Consensus 300 ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~~g~ 379 (495)
T 1wnd_A 300 DCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGY 379 (495)
T ss_dssp STTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSC
T ss_pred CCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCCCCC
Confidence 34444556888888888777665544443 6899998889888888876521 134
Q ss_pred CceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 372 GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 372 gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
.+.++|++ |.+..+.+++++.||+| ..+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 380 ~~~PTvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~ 452 (495)
T 1wnd_A 380 YYAPTLLA-GALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTW 452 (495)
T ss_dssp CBCCEEEE-CCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred eeCCEEEe-CCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEE
Confidence 45778887 67778899999999975 778999999999999999999999999999999999999999985
No 87
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=99.02 E-value=1.4e-10 Score=118.20 Aligned_cols=119 Identities=20% Similarity=0.271 Sum_probs=96.4
Q ss_pred CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc--------------CCCCceEEE
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAV 377 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v 377 (442)
+..+|+..++++|...+....++ .+||++.-..++.+.+.++.+.. .++.+.++|
T Consensus 272 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv 351 (462)
T 3etf_A 272 KRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATV 351 (462)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEE
T ss_pred cEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEE
Confidence 34577777777776665544443 26888888888888888876521 345567899
Q ss_pred ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 378 FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 378 ~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
++ |.+..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 352 l~-~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~ 418 (462)
T 3etf_A 352 LA-DVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVF 418 (462)
T ss_dssp EE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEE
T ss_pred EE-CCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence 98 66777889999999975 678999999999999999999999999999999999999999985
No 88
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=99.01 E-value=9.6e-11 Score=120.27 Aligned_cols=118 Identities=19% Similarity=0.255 Sum_probs=95.5
Q ss_pred CcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc-----------CC-CCceEEEecC
Q psy5844 324 GFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN-----------SD-YGLAAAVFTK 380 (442)
Q Consensus 324 g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~-----------~~-~gl~~~v~s~ 380 (442)
..+|+..++++|...+....++ .+||+++-..++.+++.++.+.. .+ +.+.++|++
T Consensus 302 rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~g~~~~~Ptvl~- 380 (501)
T 1uxt_A 302 LVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTFVE- 380 (501)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCBCSSSCBCCEEEE-
T ss_pred EEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCEEEe-
Confidence 3567777776666555444333 26899999899988888887632 13 557789987
Q ss_pred CCC---hhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 381 DLD---KTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 381 d~~---~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
|.+ ..+.+++++.||+| +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 381 ~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~ 448 (501)
T 1uxt_A 381 APADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIY 448 (501)
T ss_dssp CCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEE
T ss_pred CCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEE
Confidence 666 67889999999975 678999999999999999999999999999999999999999985
No 89
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=99.01 E-value=1.6e-10 Score=118.97 Aligned_cols=120 Identities=25% Similarity=0.407 Sum_probs=97.0
Q ss_pred CCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc---------------------
Q psy5844 321 GDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN--------------------- 368 (442)
Q Consensus 321 ~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~--------------------- 368 (442)
..+..+|+..++++|...+....++ .+||+++-..++.+.+.++.+..
T Consensus 307 a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~ 386 (515)
T 2d4e_A 307 ASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDL 386 (515)
T ss_dssp CCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBC
T ss_pred CCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccc
Confidence 3344678888877777666544433 26899998888888888876521
Q ss_pred -CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 369 -SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 369 -~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
.++.+.++|+++ +..+.+++++.||+| +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 387 ~~g~~~~PTvl~~--~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~ 462 (515)
T 2d4e_A 387 SRGNYLLPTVFVG--ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVY 462 (515)
T ss_dssp TTTTCBCCEEEEC--CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEE
T ss_pred CCCceeCCEEEeC--CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEE
Confidence 244567899984 667899999999975 778999999999999999999999999999999999999999985
No 90
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=98.99 E-value=1.7e-10 Score=117.75 Aligned_cols=118 Identities=25% Similarity=0.372 Sum_probs=96.9
Q ss_pred CcccccceeccCcchhHHHHHhh----------cCCcccccccCCHHHHHHHHhcC-----------CCCceEEEecCCC
Q psy5844 324 GFYVQPTVFANVRDDMKIAREEI----------FGPVQQLIRFSSIEEVIERANNS-----------DYGLAAAVFTKDL 382 (442)
Q Consensus 324 g~~v~pti~~~~~~~~~~~~~e~----------fgPvl~v~~~~~~~eai~~an~~-----------~~gl~~~v~s~d~ 382 (442)
..+|+..++++|...+....+++ +||+++-..++.+++.++.+.+. ++.+.++|++ |.
T Consensus 289 rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~g~~~~Ptvl~-~v 367 (475)
T 1euh_A 289 RVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFD-KV 367 (475)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCEETTEECCEEEE-SC
T ss_pred EEEEehhHHHHHHHHHHHHHHhccCCCccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCceeCCEEEe-CC
Confidence 35777777777766665444433 58999999999998888876321 3456778887 67
Q ss_pred ChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 383 DKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 383 ~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
+..+.+++++.||+| +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 368 ~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~ 430 (475)
T 1euh_A 368 TTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVH 430 (475)
T ss_dssp CTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEE
T ss_pred CCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEE
Confidence 777899999999975 678999999999999999999999999999999999999999985
No 91
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=98.93 E-value=5.1e-10 Score=114.70 Aligned_cols=94 Identities=23% Similarity=0.290 Sum_probs=79.4
Q ss_pred cCCcccccccCCHHHHHHHHhc--------------CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHh
Q psy5844 347 FGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIER 409 (442)
Q Consensus 347 fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~ 409 (442)
+||++.-..++.+.+.++.+.. .++.+.++|++ .+..+.+++++.||+| +.+++.+||++.
T Consensus 323 ~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~--v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~ 400 (490)
T 3ju8_A 323 MGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD--VSAVAERPDEEFFGPLLQVIRYSDFAAAIRE 400 (490)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE--CTTCSSCCCCCCCSSEEEEEEESSHHHHHHH
T ss_pred cccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE--eCCCCccccccccccEEEEEEeCCHHHHHHH
Confidence 5777877777777777776521 34557788886 5667789999999975 678999999999
Q ss_pred hccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 410 ANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 410 an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
+|+++|||++||||+|..+++++++++++|+||
T Consensus 401 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~ 433 (490)
T 3ju8_A 401 ANATQYGLAAGLLSDSRERFEQFLVESRAGIVN 433 (490)
T ss_dssp HHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEE
T ss_pred HhcCCCCceEEEEcCCHHHHHHHHHhcCcceEE
Confidence 999999999999999999999999999999985
No 92
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=98.92 E-value=4.3e-10 Score=116.64 Aligned_cols=119 Identities=20% Similarity=0.380 Sum_probs=94.5
Q ss_pred CCcccccceeccCcchhHHHHHh------------hcCCcccccccCCHHHHHHHHhc---------------CCCCceE
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREE------------IFGPVQQLIRFSSIEEVIERANN---------------SDYGLAA 375 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e------------~fgPvl~v~~~~~~~eai~~an~---------------~~~gl~~ 375 (442)
...+|+..++++|...+....++ .+||++.-..++.+.+.|+.+.. .++.+.+
T Consensus 352 ~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~P 431 (563)
T 4e3x_A 352 SRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEP 431 (563)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECC
T ss_pred cEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecC
Confidence 34677888877776665544433 25888998888888888887652 2456678
Q ss_pred EEecCCCChhhhhccccEeeeE---EeeCC--HHHHHHhh-ccCCccceeEEeccChhHHHHHHcccc--ccccC
Q psy5844 376 AVFTKDLDKTNYVTQGLRAGTL---IRFSS--IEEVIERA-NNSDYGLAAAVFTKDLDKTNYVTQGLR--AGTVW 442 (442)
Q Consensus 376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~--~~~av~~a-n~~~yGl~~~vft~d~~~~~~~~~~l~--~G~v~ 442 (442)
+|+. +.+..+.+++++.||+| +.+++ .+|+++.+ |+++|||+++|||+|..++.+++++++ +|+||
T Consensus 432 Tvl~-~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~ 505 (563)
T 4e3x_A 432 CIIE-SKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFY 505 (563)
T ss_dssp EEEE-ESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEE
T ss_pred EEEe-cCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEE
Confidence 8887 66677899999999976 44564 69999999 799999999999999999999999975 99885
No 93
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=98.91 E-value=6.4e-10 Score=122.09 Aligned_cols=119 Identities=17% Similarity=0.322 Sum_probs=100.0
Q ss_pred CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc------------C-CCCceEEEe
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN------------S-DYGLAAAVF 378 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~------------~-~~gl~~~v~ 378 (442)
+..+|+..|+++|...+....+++ +||++.-..++.+.+.|+.+.. . ++.+.++|+
T Consensus 819 ~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G~~v~gG~~~~~~G~fv~PTvl 898 (1026)
T 4f9i_A 819 SRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTII 898 (1026)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHSEEEEECCCCSSSSCCCCCEEE
T ss_pred ceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCCeEEecCCcCCCCCceecceee
Confidence 446888888888777665555543 6899999999988888887631 1 566788999
Q ss_pred cCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 379 TKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 379 s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
. |.+..+.+++++.||+| +..++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus 899 ~-~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~ 964 (1026)
T 4f9i_A 899 G-GIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLY 964 (1026)
T ss_dssp E-SCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEE
T ss_pred e-cCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEE
Confidence 8 67778899999999975 678999999999999999999999999999999999999999985
No 94
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=98.90 E-value=6.2e-10 Score=115.25 Aligned_cols=119 Identities=15% Similarity=0.211 Sum_probs=94.7
Q ss_pred CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHh-------------------cCCCC
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERAN-------------------NSDYG 372 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an-------------------~~~~g 372 (442)
+..+|+..++++|...+....+++ +||+++-..++.+++.|+.+. ..++.
T Consensus 303 ~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~ 382 (534)
T 2y53_A 303 RRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAAC 382 (534)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCC
T ss_pred CEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHHHcCCEEEECCcccccccccCCCCce
Confidence 446888888888877665544432 589999999999888888651 01445
Q ss_pred ceEEEecCCCChh--hhhccccEeeeE---EeeC---CH-----HHHHHhhccCCccceeEEeccChhHHHHHHccc--c
Q psy5844 373 LAAAVFTKDLDKT--NYVTQGLRAGTL---IRFS---SI-----EEVIERANNSDYGLAAAVFTKDLDKTNYVTQGL--R 437 (442)
Q Consensus 373 l~~~v~s~d~~~~--~~~~~~~~~G~V---~vN~---~~-----~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l--~ 437 (442)
+.++|++ |.+.. +.+++++.||+| +.++ +. +|+++.+|+++|||++||||+|..++.+++++| +
T Consensus 383 ~~PTvl~-~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~ 461 (534)
T 2y53_A 383 VAPHLFV-VNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADS 461 (534)
T ss_dssp CCCEEEE-CSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTT
T ss_pred ecCEEEE-ecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhh
Confidence 6788887 44433 589999999975 6688 88 999999999999999999999999999999999 8
Q ss_pred ccccC
Q psy5844 438 AGTVW 442 (442)
Q Consensus 438 ~G~v~ 442 (442)
+|+||
T Consensus 462 aG~V~ 466 (534)
T 2y53_A 462 HGRVH 466 (534)
T ss_dssp EEEEE
T ss_pred CCEEE
Confidence 99885
No 95
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=98.89 E-value=5e-10 Score=114.60 Aligned_cols=95 Identities=22% Similarity=0.352 Sum_probs=80.9
Q ss_pred cCCcccccccCCHHHHHHHHh---------------cCCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHH
Q psy5844 347 FGPVQQLIRFSSIEEVIERAN---------------NSDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIE 408 (442)
Q Consensus 347 fgPvl~v~~~~~~~eai~~an---------------~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~ 408 (442)
+||++.-..++.+++.++.+. ..++.+.++|++ +.+..+.+++++.||+| +.+++.+|+++
T Consensus 322 ~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~-~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~ 400 (486)
T 1t90_A 322 LGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFD-NVTTEMTIWKDEIFAPVLSVIRVKNLKEAIE 400 (486)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEe-CCCCCCHhhcCcccCceEEEEEeCCHHHHHH
Confidence 678888888888877777542 124557889987 66677899999999975 67899999999
Q ss_pred hhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 409 RANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 409 ~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
.+|+++|||++||||+|..++.++++++++|+||
T Consensus 401 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~ 434 (486)
T 1t90_A 401 IANKSEFANGACLFTSNSNAIRYFRENIDAGMLG 434 (486)
T ss_dssp HHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEE
T ss_pred HHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEE
Confidence 9999999999999999999999999999999985
No 96
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=98.72 E-value=4.8e-09 Score=107.98 Aligned_cols=123 Identities=9% Similarity=0.022 Sum_probs=94.4
Q ss_pred ccCCCCcccccc-eeccCcchhHHHHHhh-cCCcccccccCCHHHHHHHHhc-----------CCCCceEEEecCCCChh
Q psy5844 319 RAGDKGFYVQPT-VFANVRDDMKIAREEI-FGPVQQLIRFSSIEEVIERANN-----------SDYGLAAAVFTKDLDKT 385 (442)
Q Consensus 319 ~~~~~g~~v~pt-i~~~~~~~~~~~~~e~-fgPvl~v~~~~~~~eai~~an~-----------~~~gl~~~v~s~d~~~~ 385 (442)
|...+..+|+.. ++++|.+.+....+++ .||++.-...+...+.++.+.. .++.+.++|++ +....
T Consensus 289 C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~~g~~~~Ptvl~-~~~~~ 367 (510)
T 1ez0_A 289 CTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFV-TSSEN 367 (510)
T ss_dssp TTCCCEEEEESSHHHHHHHHHHHHHHHHCCCBCCSSHHHHHHHHHHHHHHHTSTTEEEEECCCCTTSBCCEEEE-EEHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEecCCCCCEecCEEEE-ecCCc
Confidence 333455788998 9888887776555554 4787776666666655554431 14556788887 44344
Q ss_pred ---hhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccCh--hHHHHHHccc--cccccC
Q psy5844 386 ---NYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDL--DKTNYVTQGL--RAGTVW 442 (442)
Q Consensus 386 ---~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~--~~~~~~~~~l--~~G~v~ 442 (442)
+.+++++.||+| +.+++.+|+++.+|+++|||++||||+|. .++.+++++| ++|+||
T Consensus 368 ~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~ 434 (510)
T 1ez0_A 368 WRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLV 434 (510)
T ss_dssp HHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEE
T ss_pred cccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEE
Confidence 789999999975 67899999999999999999999999997 7999999999 799885
No 97
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=98.71 E-value=6e-09 Score=114.21 Aligned_cols=117 Identities=19% Similarity=0.313 Sum_probs=92.8
Q ss_pred CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHh-----------cCCCCceEEEecC
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERAN-----------NSDYGLAAAVFTK 380 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an-----------~~~~gl~~~v~s~ 380 (442)
+..+|+..|+++|...+....+++ +||++....++.+.+.++.+. ..++.+.++|++.
T Consensus 798 ~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v~gg~~~~~G~fv~PTvl~~ 877 (1001)
T 3haz_A 798 RLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPEGCFVAPHIFEL 877 (1001)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEEECCCCSSSCCCCEEEEC
T ss_pred ceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeEeccccCCCCcEEeeEEecC
Confidence 345778888877776665544443 688898888888888887653 2356778899973
Q ss_pred CCChhhhhccccEeeeE---EeeCC--HHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 381 DLDKTNYVTQGLRAGTL---IRFSS--IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 381 d~~~~~~~~~~~~~G~V---~vN~~--~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
..+.+++++.||+| +.+++ .+|+|+.+|+++|||++||||+|..++.++++++++|+||
T Consensus 878 ---~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~ 941 (1001)
T 3haz_A 878 ---TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIY 941 (1001)
T ss_dssp ---SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEE
T ss_pred ---CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEE
Confidence 24567899999986 33554 6999999999999999999999999999999999999985
No 98
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=98.59 E-value=6.3e-09 Score=107.55 Aligned_cols=123 Identities=16% Similarity=0.072 Sum_probs=87.6
Q ss_pred ccCCCCcccccc-eeccCcchhHHHHHhh-----cCCcccccccCCHHHHHHHH--------hcCCCCceEEEecCCCCh
Q psy5844 319 RAGDKGFYVQPT-VFANVRDDMKIAREEI-----FGPVQQLIRFSSIEEVIERA--------NNSDYGLAAAVFTKDLDK 384 (442)
Q Consensus 319 ~~~~~g~~v~pt-i~~~~~~~~~~~~~e~-----fgPvl~v~~~~~~~eai~~a--------n~~~~gl~~~v~s~d~~~ 384 (442)
|...+..+|+.. ++++|...+....+++ +||++.-...+.+++.++.- ...++.+.++|++ +...
T Consensus 323 C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~~~~gp~~~~~~~~~v~~~~~~~Ga~v~~gG~~~g~~~~PTvl~-~~~~ 401 (528)
T 3v4c_A 323 CTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARFATRNAVKPLLATESSGRDASPNLFE-TTGA 401 (528)
T ss_dssp TTCCCEEEEESSHHHHHHHHHHHHHHHTCCCEECSCHHHHHHHHHHHHHHHTCTTCEEEECCCCCTTEECCEEEE-EEHH
T ss_pred cccCcEEEEecccHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCCEEEeCCCcCCceeccEEEE-ecCc
Confidence 333345688876 8887777665554443 46665433333333333200 0124456788887 4444
Q ss_pred h---hhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEecc--ChhHHHHHHcccc--ccccC
Q psy5844 385 T---NYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTK--DLDKTNYVTQGLR--AGTVW 442 (442)
Q Consensus 385 ~---~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~--d~~~~~~~~~~l~--~G~v~ 442 (442)
. +.+++++.||+| +.+++.+||++.+|+++|||++||||+ |..++.+++++|+ +|+||
T Consensus 402 ~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~ 469 (528)
T 3v4c_A 402 QFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVL 469 (528)
T ss_dssp HHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEE
T ss_pred ccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEE
Confidence 3 789999999975 678999999999999999999999999 8999999999997 99985
No 99
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=98.49 E-value=7e-08 Score=98.07 Aligned_cols=124 Identities=10% Similarity=0.047 Sum_probs=72.7
Q ss_pred CCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhc----CCcccccccCC-HHHHHHHHhcCCCCceEEEecCCCCh
Q psy5844 310 GAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF----GPVQQLIRFSS-IEEVIERANNSDYGLAAAVFTKDLDK 384 (442)
Q Consensus 310 Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~f----gPvl~v~~~~~-~~eai~~an~~~~gl~~~v~s~d~~~ 384 (442)
|.....| .|...+..+|+..+ ++|...+....+++. |+-.. .+- ++++++.+-. +.|+.++++ .+.
T Consensus 262 ~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~---~~~~i~~a~~~~~g-G~g~~Ptvl---v~~ 332 (468)
T 1vlu_A 262 AKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL---KTAYFDKLNELGKL-TEAIQCKTV---DAD 332 (468)
T ss_dssp TTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH---HHHHHHHHHHHTCC-CHHHHTTBC------
T ss_pred HhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH---hcccccccceeecc-CCCCCCcee---eCC
Confidence 3334444 55444557889988 888777665555554 33211 000 2223221111 101334454 234
Q ss_pred hhhhccccEeee---EEeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 385 TNYVTQGLRAGT---LIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 385 ~~~~~~~~~~G~---V~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
.+.+++++.||+ |+.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 333 ~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~ 393 (468)
T 1vlu_A 333 EEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVY 393 (468)
T ss_dssp ----------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEE
T ss_pred CchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEE
Confidence 567999999996 4778999999999999999999999999999999999999999985
No 100
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=98.44 E-value=8.1e-08 Score=97.09 Aligned_cols=112 Identities=17% Similarity=0.095 Sum_probs=75.8
Q ss_pred cccCCCCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeE
Q psy5844 318 GRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397 (442)
Q Consensus 318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V 397 (442)
.|...+..+|+..++++|...+....+++.. ....-....+.++.+. .| ++. +..+.+++++.||+|
T Consensus 278 ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~---~~~g~p~~~~~i~~a~---~G----~~~---~~~~~~~~eEiFGPV 344 (444)
T 4ghk_A 278 TCNTMETLLVARGIAPAVLSPLGRLYREKGV---ELRVDADARAVLEAAG---VG----PLV---DATDEDWRTEYLAPV 344 (444)
T ss_dssp -CCCCCEEEEEGGGHHHHHHHHHHHHHHTTC---EEEECHHHHHHHHHTT---CC----CCE---ECCSGGGTCC---CE
T ss_pred ccCcCceEEEeHHHHHHHHHHHHHHHHHcCC---eecCCHHHHHHHHhcc---cC----ccc---CCCchhhhccccCce
Confidence 4444456789999998887766655554421 0000011233443332 22 232 223678999999975
Q ss_pred ---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 398 ---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 398 ---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
+.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 345 l~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~ 392 (444)
T 4ghk_A 345 LAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVM 392 (444)
T ss_dssp EEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred EEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEE
Confidence 668999999999999999999999999999999999999999985
No 101
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=98.35 E-value=7.9e-08 Score=97.73 Aligned_cols=94 Identities=7% Similarity=0.018 Sum_probs=66.3
Q ss_pred cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHH----HhhccCCcccee
Q psy5844 347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVI----ERANNSDYGLAA 419 (442)
Q Consensus 347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av----~~an~~~yGl~~ 419 (442)
+||++.-..++.+.+.++.....+..+..+- ..+....+.+. ++.||+| +..++.+||+ +.+|+++|||++
T Consensus 298 ~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg-~~~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a 375 (464)
T 3k9d_A 298 MNPAIVGKSVQHIANLAGLTVPADARVLIAE-ETKVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTL 375 (464)
T ss_dssp BCGGGTTCCHHHHHHHTTCCCCTTCCEEEEE-CCCCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEE
T ss_pred cCcccCHHHHHHHHHHhhhhhcCCCEEEEcC-CCCCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeE
Confidence 5777766655555555443322222222111 11344445555 6789965 6789999997 789999999999
Q ss_pred EEeccChhHHHHHHccccccccC
Q psy5844 420 AVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 420 ~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
||||+|..++.++++++++|+||
T Consensus 376 ~i~t~d~~~a~~~~~~l~~G~v~ 398 (464)
T 3k9d_A 376 IIHSEDKEIIREFALKKPVSRLL 398 (464)
T ss_dssp EEECSCHHHHHHHHHHSSEEEEE
T ss_pred EEEeCCHHHHHHHHHhCCEeEEE
Confidence 99999999999999999999985
No 102
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=98.18 E-value=1.2e-07 Score=96.11 Aligned_cols=114 Identities=10% Similarity=0.161 Sum_probs=80.5
Q ss_pred CCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHH----------------hcCCCCceEEE-------ec
Q psy5844 323 KGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERA----------------NNSDYGLAAAV-------FT 379 (442)
Q Consensus 323 ~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~a----------------n~~~~gl~~~v-------~s 379 (442)
...+|+..++++|...+. +..||+++-..++.+++.++.. ...++...+++ ++
T Consensus 250 ~rv~V~~~i~d~f~~~l~----~~~gpli~~~~~~~v~~~i~~~~~~~a~v~G~~~~~~~~~~G~~v~pt~~vl~~~~~~ 325 (452)
T 3my7_A 250 QAVIVVDEVYDEVKERFA----SHKAHVLSKTDADKVRKVLLIDGALNAKIVGQPATAIAEMAGVKVPADTKVLIGEGLG 325 (452)
T ss_dssp EEEEEEGGGHHHHHHHHH----TTTEEECCHHHHHHHHHHHEETTEECGGGTTCCHHHHHHHHTCCCCTTCCEEEEECSS
T ss_pred cEEEEcHHHHHHHHHHHH----HhCCCcCCHHHHHHHHHHHHhhcccCCeEecCccchhHHhCCceeCCCeeEEeecccc
Confidence 446777777776654432 3357777766666665555321 11233444443 33
Q ss_pred CCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCC----ccceeEEeccChhHHHH---HHccccccccC
Q psy5844 380 KDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSD----YGLAAAVFTKDLDKTNY---VTQGLRAGTVW 442 (442)
Q Consensus 380 ~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~----yGl~~~vft~d~~~~~~---~~~~l~~G~v~ 442 (442)
+.+..+.+.+ +.||+| +..++.+|+++.+|++. |||+++|||+|..++.+ +++++++|+|+
T Consensus 326 -~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~ 396 (452)
T 3my7_A 326 -KVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARIL 396 (452)
T ss_dssp -SCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEE
T ss_pred -CCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEE
Confidence 5555666776 679975 67899999999999985 99999999999998888 99999999985
No 103
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=98.18 E-value=6.8e-07 Score=89.82 Aligned_cols=57 Identities=12% Similarity=0.177 Sum_probs=53.2
Q ss_pred hhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 386 NYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 386 ~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 316 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~ 375 (427)
T 1o20_A 316 EDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVY 375 (427)
T ss_dssp GGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEE
T ss_pred cchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEE
Confidence 568999999975 678999999999999999999999999999999999999999985
No 104
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=98.01 E-value=2e-06 Score=87.17 Aligned_cols=59 Identities=8% Similarity=0.122 Sum_probs=52.5
Q ss_pred hhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844 384 KTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442 (442)
Q Consensus 384 ~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~ 442 (442)
..+.+++++.||+| +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus 327 ~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~ 388 (463)
T 2h5g_A 327 SEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVF 388 (463)
T ss_dssp ---CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEE
T ss_pred CCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEE
Confidence 45778999999974 668999999999999999999999999999999999999999985
No 105
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=92.61 E-value=8.2 Score=37.71 Aligned_cols=233 Identities=16% Similarity=0.130 Sum_probs=131.4
Q ss_pred CCcceEEEeeccceEEEecccc---cchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCC
Q psy5844 95 GDFFAYTRHEPVGVCGQIIPWN---FPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171 (442)
Q Consensus 95 ~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~ 171 (442)
.|.....++.|+--|++..|.- || ++++...+||-.+|+.=|+-.+|-. ....+.-+.+.+|+.. +..-.
T Consensus 113 ~Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~--i~p~iL~AA~l~Gv~e----Iy~vG 185 (434)
T 1kae_A 113 PGVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPP--IADEILYAAQLCGVQD----VFNVG 185 (434)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECSS--CCHHHHHHHHHTTCCE----EEECC
T ss_pred CCcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCCC--CCHHHHHHHHHcCCCE----Eeecc
Confidence 4666778899999999999983 55 5666778899999998765444321 1122233445666663 22222
Q ss_pred c-cchhhhh----cCCCccEEeecCCHHHHHHHHhh---ccCCCCceeeeecCCCCceEE--eCCCCHHHHHHHHHHHhh
Q psy5844 172 G-DAGAALV----QHPGVDKVAFTGSTEVGKLVQQG---SGASNLKRTTLELGGKSPNII--FADADLDAAVEGAHFGLF 241 (442)
Q Consensus 172 ~-~~~~~l~----~~~~v~~v~ftGs~~~~~~i~~~---~~~~~~~~~~~e~gG~~~~iV--~~dad~~~a~~~i~~~~~ 241 (442)
| +...+|. .-|.||.|+=.|..-+..+=+.. .+ ..-+=+. .|.+=++| +++||.+.++..++.-+=
T Consensus 186 GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G---~VgIDm~-AGPSEilViAD~tAnp~~vAaDLLsQAE 261 (434)
T 1kae_A 186 GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD---GAAIDMP-AGPSEVLVIADSGATPDFVASDLLSQAE 261 (434)
T ss_dssp HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTT---SCEESCC-CCCCEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcC---ccccCCC-CCCceEEEEeCCCCCHHHHHHHHHHHhc
Confidence 3 3333333 35789999999988654432222 11 0111111 23333333 456899988888776553
Q ss_pred ccCCCcccCCCEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC
Q psy5844 242 FNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG 321 (442)
Q Consensus 242 ~~~Gq~C~s~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~ 321 (442)
+.. ..+-|+|..+ ++|.+++.+.+.+. + .
T Consensus 262 Hd~-----~a~aiLvT~s--~~la~~V~~ev~~q---------------------------l----~------------- 290 (434)
T 1kae_A 262 HGP-----DSQVILLTPA--ADMARRVAEAVERQ---------------------------L----A------------- 290 (434)
T ss_dssp TCT-----TCEEEEEESC--HHHHHHHHHHHHHH---------------------------H----T-------------
T ss_pred cCC-----CCcEEEEECC--HHHHHHHHHHHHHH---------------------------H----H-------------
Confidence 332 2345666655 45555554444321 0 0
Q ss_pred CCCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccE-eeeEEee
Q psy5844 322 DKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLR-AGTLIRF 400 (442)
Q Consensus 322 ~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~-~G~V~vN 400 (442)
..+. ..+ .+.-+..- .+..+++++|+++++|..-.-+ ..+.++|+ +.++.+++ +|.|++.
T Consensus 291 ------------~lpr-~~i-a~~sl~~~-~ii~v~~l~ea~~~~N~~APEH-Lel~~~dp---~~~l~~I~nAGaIFlG 351 (434)
T 1kae_A 291 ------------ELPR-AET-ARQALNAS-RLIVTKDLAQCVEISNQYGPEH-LIIQTRNA---RELVDSITSAGSVFLG 351 (434)
T ss_dssp ------------TCTT-HHH-HHHHHTTC-EEEECSSHHHHHHHHHHHCCSE-EEEESTTH---HHHGGGCCSCSEEEES
T ss_pred ------------hCCh-HHH-HHHHHHcC-eEEEECCHHHHHHHHHHhhhHh-hhhhhcCH---HHHHhhcCcccchhcC
Confidence 0000 001 11122223 4556789999999999844333 25777664 45556665 8999998
Q ss_pred CCHHHHHH
Q psy5844 401 SSIEEVIE 408 (442)
Q Consensus 401 ~~~~~av~ 408 (442)
....+++.
T Consensus 352 ~~tpe~~G 359 (434)
T 1kae_A 352 DWSPESAG 359 (434)
T ss_dssp TTCCHHHH
T ss_pred CCCchhhc
Confidence 77666654
No 106
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=92.08 E-value=8.5 Score=37.51 Aligned_cols=164 Identities=18% Similarity=0.144 Sum_probs=96.6
Q ss_pred CCcceEEEeeccceEEEecccc---cchHHHHhhhhhhhccCCeEE-e-cCCCCChHHHHHHHHHHHHhCCCCCcEEeec
Q psy5844 95 GDFFAYTRHEPVGVCGQIIPWN---FPLLMLAWKIAPALATGNTIV-L-KPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169 (442)
Q Consensus 95 ~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~aL~~Gn~vv-~-kps~~~~~~~~~l~~~l~~aglp~~~~~~v~ 169 (442)
.|.....++.|+--|++..|.. || ++++...+||-.+|+.=| + -|.+.. .....+.-+.+.+|+.+ +..
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~~G-~i~p~iL~AA~l~Gv~e----Iy~ 192 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYP-SSVLMNAVPAKVAGVPELIMAVPAPRG-ELNALVLAAAYISGVDR----VFR 192 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCH-HHHHHHHHHHHHHTCSEEEEECCCGGG-CCCHHHHHHHHHHTCCE----EEC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchh-hHHHHhhccHHHhCCCeEEEecCCCCC-CccHHHHHHHHhcCCcE----EEE
Confidence 5666778899999999999965 55 456667889999999743 3 333221 12223333445567653 333
Q ss_pred CCc-cchhhhh----cCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEE-eCCCCHHHHHHHHHHHhhcc
Q psy5844 170 GYG-DAGAALV----QHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNII-FADADLDAAVEGAHFGLFFN 243 (442)
Q Consensus 170 ~~~-~~~~~l~----~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV-~~dad~~~a~~~i~~~~~~~ 243 (442)
-.| +...+|. .-|.||.|+=.|..-+..+=+...+ ..-+=+..|-.--+|+ ++++|.+.++..++.-+=+.
T Consensus 193 vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g---~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAEHd 269 (423)
T 4gic_A 193 IGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG---QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAEHD 269 (423)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT---TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHTTC
T ss_pred cCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC---CcCcccccccceEEEEeCCCCCHHHHHHHHHHhhccC
Confidence 334 4444443 3578999999999877654333322 1122222233333333 44689999888887665443
Q ss_pred CCCcccCCCEEEEcCccHHHHHHHHHHHHhh
Q psy5844 244 MGQCCCAGSRTFVQDTIYDEFVARSGERAKR 274 (442)
Q Consensus 244 ~Gq~C~s~~~v~V~~~~~~~f~~~l~~~~~~ 274 (442)
.. .+-++|..+ ++|.+++.+.+.+
T Consensus 270 ~~-----a~~iLvT~s--~~la~~V~~~i~~ 293 (423)
T 4gic_A 270 ED-----AQAILISPD--AAHLEAVQASIER 293 (423)
T ss_dssp TT-----CEEEEEESC--HHHHHHHHHHHHH
T ss_pred CC-----CeEEEEeCc--HHHHHHHHHHHHH
Confidence 32 345777666 4555555555543
No 107
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=35.22 E-value=38 Score=28.05 Aligned_cols=113 Identities=15% Similarity=0.044 Sum_probs=69.5
Q ss_pred ceEEEeccccc-chHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHH-hCCCCCcEEeecCCc--cchhhhhcCC
Q psy5844 107 GVCGQIIPWNF-PLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAE-AGIPEGVVNIVPGYG--DAGAALVQHP 182 (442)
Q Consensus 107 Gvv~~i~p~n~-P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~-aglp~~~~~~v~~~~--~~~~~l~~~~ 182 (442)
|-|+++..-+. +-...+..-...+..|-.++-- .-|+ +.|.+ .|++...++=++..+ ++++.+. +-
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~-~g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTG----NLISRATGMNVNAMLSGPMGGDQQVGALIS-EG 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHH----HHHHHHHCCCCEEECCGGGTHHHHHHHHHH-TT
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHH----HHHHHHhCceeEEEEecCCCCCchHHHHHH-CC
Confidence 65665555443 3333334444455577776652 2233 45566 799987776554322 4555554 55
Q ss_pred CccEEeecCC-------HHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCC
Q psy5844 183 GVDKVAFTGS-------TEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMG 245 (442)
Q Consensus 183 ~v~~v~ftGs-------~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~G 245 (442)
.+++|+||-+ ..-+..|++.|. ....|+..-+ ..++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~-~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLAT-VWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHH-HTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 7999999876 457788888887 4666666554 446677777777664
No 108
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=34.08 E-value=29 Score=30.85 Aligned_cols=68 Identities=13% Similarity=0.166 Sum_probs=45.2
Q ss_pred HhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEeecCCHHHHH
Q psy5844 123 AWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGK 197 (442)
Q Consensus 123 ~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~ftGs~~~~~ 197 (442)
+..++..+.+||-||++.+. +.....+..+|... +|.+.+++++.+.+- ...-..+.+.++.+.....
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~s~~Y----~~~~~cnilgls~~v~iP~ 88 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPYSSQY----EEAYRCNFLGLSPHVQIPP 88 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEEESSC----CCTTTCSEEEECTTCCCCH
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhccccchhh----cchhheeeecCCCCcccCc
Confidence 34566678899999999776 55666677788887 999999998643221 1122355666655544433
No 109
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=30.63 E-value=2.1e+02 Score=27.85 Aligned_cols=85 Identities=16% Similarity=0.082 Sum_probs=50.6
Q ss_pred hHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHH-hCCCC-CcEEeecCCc--cchhhhhcCCCccEEeecCCHH
Q psy5844 119 LLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAE-AGIPE-GVVNIVPGYG--DAGAALVQHPGVDKVAFTGSTE 194 (442)
Q Consensus 119 ~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~-aglp~-~~~~~v~~~~--~~~~~l~~~~~v~~v~ftGs~~ 194 (442)
+......+.+.|..|..||.+ |.-.|-|+..+.+.+.+ .|+-. .-+.++.++. ..+.+....-..+.|+.-+...
T Consensus 108 V~~~~~~i~~~l~~g~iVV~~-STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~Pe~~~~G~A~~~~~~p~~Iv~G~~~~ 186 (431)
T 3ojo_A 108 VMRALDSILPFLKKGNTIIVE-STIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPERVLPGKILEELVHNNRIIGGVTKA 186 (431)
T ss_dssp HHHHHHHHGGGCCTTEEEEEC-SCCCTTHHHHTHHHHHHTTTCCBTTTEEEEECCCCCCTTSHHHHHHHSCEEEEESSHH
T ss_pred HHHHHHHHHHhCCCCCEEEEe-cCCChhHHHHHHHHHHHHcCCCcCCCeEEEECCCcCCCcchhhcccCCCEEEEeCCHH
Confidence 556667788888888777776 67788899999886655 56532 2366666653 2222221111134565555566
Q ss_pred HHHHHHhhcc
Q psy5844 195 VGKLVQQGSG 204 (442)
Q Consensus 195 ~~~~i~~~~~ 204 (442)
..+.+.....
T Consensus 187 ~~~~~~~ly~ 196 (431)
T 3ojo_A 187 CIEAGKRVYR 196 (431)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 6666555443
No 110
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=28.71 E-value=34 Score=29.10 Aligned_cols=123 Identities=15% Similarity=-0.016 Sum_probs=75.3
Q ss_pred cceEEEeecc-ceEEEeccccc-chHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHH-hCCCCCcEEeecCCc-
Q psy5844 97 FFAYTRHEPV-GVCGQIIPWNF-PLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAE-AGIPEGVVNIVPGYG- 172 (442)
Q Consensus 97 ~~~~~~~~P~-Gvv~~i~p~n~-P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~-aglp~~~~~~v~~~~- 172 (442)
........|. |-|+++..-+. +-...+..-...+..|-.++- +.-| ++.|.+ .|++...++=++..+
T Consensus 17 ~~~~~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gT----a~~L~e~~Gl~v~~v~k~~eGG~ 87 (178)
T 1vmd_A 17 PRRYKIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTT----GALLQEKLGLKVHRLKSGPLGGD 87 (178)
T ss_dssp CCEEEEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHH----HHHHHHHHCCCCEECSCGGGTHH
T ss_pred ccceeeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHH----HHHHHHHhCceeEEEeecCCCCC
Confidence 3345555664 76666665553 333444444455667887664 2333 355666 799987665444322
Q ss_pred -cchhhhhcCCCccEEeecCC-------HHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccC
Q psy5844 173 -DAGAALVQHPGVDKVAFTGS-------TEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNM 244 (442)
Q Consensus 173 -~~~~~l~~~~~v~~v~ftGs-------~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~ 244 (442)
++++.+ ..-.+++|+||-+ ..-+..|++.|. ....|+..-+ ..++.++.+.+++.
T Consensus 88 pqI~d~I-~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~-~~~IP~~Tnl---------------atA~A~v~ail~~~ 150 (178)
T 1vmd_A 88 QQIGAMI-AEGKIDVLIFFWDPLEPQAHDVDVKALIRIAT-VYNIPVAITR---------------STADFLISSPLMND 150 (178)
T ss_dssp HHHHHHH-HTTSCCEEEEECCSSSCCTTSCCHHHHHHHHH-HTTCCEESSH---------------HHHHHHHHSGGGGS
T ss_pred chHHHHH-HCCCccEEEEccCccCCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhccc
Confidence 455555 4557999999876 235677888777 3556666554 45677778877766
Q ss_pred C
Q psy5844 245 G 245 (442)
Q Consensus 245 G 245 (442)
.
T Consensus 151 ~ 151 (178)
T 1vmd_A 151 V 151 (178)
T ss_dssp C
T ss_pred c
Confidence 4
No 111
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=26.96 E-value=1e+02 Score=22.11 Aligned_cols=38 Identities=29% Similarity=0.462 Sum_probs=30.4
Q ss_pred ccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc
Q psy5844 131 ATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG 172 (442)
Q Consensus 131 ~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~ 172 (442)
.++|-+|+|..|-. +..++.++.+..+|. ++..+-|+.
T Consensus 19 ~~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGDD 56 (79)
T 2zfz_A 19 DSGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGDD 56 (79)
T ss_dssp EETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECSS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCC
Confidence 48999999988655 678888999987775 888887753
No 112
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=26.38 E-value=96 Score=21.78 Aligned_cols=38 Identities=32% Similarity=0.468 Sum_probs=30.1
Q ss_pred ccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc
Q psy5844 131 ATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG 172 (442)
Q Consensus 131 ~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~ 172 (442)
.++|-+|+|..|.. +..++.++.+.++|+ ++..+-|+.
T Consensus 11 ~~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGDD 48 (71)
T 1b4b_A 11 GTGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGDD 48 (71)
T ss_dssp EETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECSS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeCC
Confidence 47999999988655 678888999987776 888887743
No 113
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=24.50 E-value=96 Score=23.32 Aligned_cols=60 Identities=23% Similarity=0.387 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHHHHHHh-cCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCC
Q psy5844 292 DKEQMDKILEFIESGKS-QGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSD 370 (442)
Q Consensus 292 ~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~ 370 (442)
+.+.+++..+.....+. .|++++..|.. +.++.+-. .+-+.+..|.+.+.+.++.++..
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~---------~~~~eG~~-----------~~~~viieFpS~~aa~~~~~s~~ 75 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGGS---------VTELEGTA-----------RARNVVIEFPSVQHAIDCYNSPE 75 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCC---------EEEEESCC-----------CSEEEEEEESSHHHHHHHHHSHH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECCC---------ceEEecCC-----------cCeEEEEECCCHHHHHHHHcCHH
Confidence 44444444444444443 48888876643 33443321 23567788999999998887654
Q ss_pred C
Q psy5844 371 Y 371 (442)
Q Consensus 371 ~ 371 (442)
|
T Consensus 76 Y 76 (99)
T 2fiu_A 76 Y 76 (99)
T ss_dssp H
T ss_pred H
Confidence 4
No 114
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=23.96 E-value=65 Score=26.11 Aligned_cols=62 Identities=6% Similarity=0.025 Sum_probs=42.6
Q ss_pred HHHHHHhCCCCCcEEeecCC------ccchhhhhcCCCccEEeecCCH-----HHHHHHHhhccCCCCceeeeec
Q psy5844 152 GALIAEAGIPEGVVNIVPGY------GDAGAALVQHPGVDKVAFTGST-----EVGKLVQQGSGASNLKRTTLEL 215 (442)
Q Consensus 152 ~~~l~~aglp~~~~~~v~~~------~~~~~~l~~~~~v~~v~ftGs~-----~~~~~i~~~~~~~~~~~~~~e~ 215 (442)
++.|.+.|+|...++-++.+ +.+.+.+ .+-.+++|++|-+. .-+..|++.+- ....|++..+
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i-~~g~i~lVInt~~~~~~~~~d~~~iRR~Av-~~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLI-RDGSIDLVINLPNNNTKFVHDNYVIRRTAV-DSGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHH-HTTSCCEEEECCCCCGGGHHHHHHHHHHHH-HTTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHH-HCCCceEEEECCCCCCcCCccHHHHHHHHH-HhCCCeEcCH
Confidence 45667899998887766532 3344444 45579999997655 36778888777 4667776654
No 115
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=22.45 E-value=79 Score=22.74 Aligned_cols=39 Identities=18% Similarity=0.372 Sum_probs=31.3
Q ss_pred ccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc
Q psy5844 131 ATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG 172 (442)
Q Consensus 131 ~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~ 172 (442)
.++|-+|+|..|.. +..++.++.+.+.+++++..+-|+.
T Consensus 13 ~~~n~vVikT~PG~---A~~va~~iD~~~~~~~I~GTIAGDD 51 (78)
T 1xxa_A 13 YNDAVVVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGDD 51 (78)
T ss_dssp ECSSCEEEEESTTT---HHHHHHHHTTTTTTTTEEEEEECSS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhcCCCCCeEEEEecCC
Confidence 37999999987654 6778888888777888999888754
No 116
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=21.76 E-value=76 Score=27.01 Aligned_cols=44 Identities=16% Similarity=0.320 Sum_probs=35.3
Q ss_pred hhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc
Q psy5844 126 IAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG 172 (442)
Q Consensus 126 ~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~ 172 (442)
+...-.+||-+|+|..|.. +..++.++.+.++|++++..+-|+.
T Consensus 110 vvsv~~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGDD 153 (180)
T 3v4g_A 110 VLDVDHNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGDD 153 (180)
T ss_dssp EEEEEECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECSS
T ss_pred EEEEeecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecCC
Confidence 3444468999999988755 6788889998889998999998754
No 117
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=21.54 E-value=4.2e+02 Score=24.70 Aligned_cols=86 Identities=15% Similarity=0.042 Sum_probs=51.5
Q ss_pred hccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecC--C------c-cchhhhhcCCCccEEeec---CCHHHHH
Q psy5844 130 LATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG--Y------G-DAGAALVQHPGVDKVAFT---GSTEVGK 197 (442)
Q Consensus 130 L~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~--~------~-~~~~~l~~~~~v~~v~ft---Gs~~~~~ 197 (442)
...|+.-++-=| -..+..+...+.+.|+.- -.++.- + - +..++|..+|..+.|... |+... +
T Consensus 166 ~~~G~vgivSqS---G~l~~~i~~~~~~~g~G~--S~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e-~ 239 (334)
T 3mwd_B 166 YRPGSVAYVSRS---GGMSNELNNIISRTTDGV--YEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEE-Y 239 (334)
T ss_dssp TSCCSEEEEESC---HHHHHHHHHHHHHHSSCE--EEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHH-H
T ss_pred CCCCCEEEEeCc---hHHHHHHHHHHHhcCCCe--EEEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCChHH-H
Confidence 456887777433 233444555666666642 233321 1 1 566788999999988874 55554 4
Q ss_pred HHHhhccC-CCCceeeeecCCCCce
Q psy5844 198 LVQQGSGA-SNLKRTTLELGGKSPN 221 (442)
Q Consensus 198 ~i~~~~~~-~~~~~~~~e~gG~~~~ 221 (442)
...+.+.+ ...||++.--.|.+..
T Consensus 240 ~~~~~~r~~~~~KPVV~~kaGrs~~ 264 (334)
T 3mwd_B 240 KICRGIKEGRLTKPIVCWCIGTCAT 264 (334)
T ss_dssp HHHHHHHTTSCCSCEEEEEECTTCC
T ss_pred HHHHHHHhhcCCCCEEEEEcCCCcc
Confidence 44444332 3568999888888754
No 118
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=21.19 E-value=95 Score=22.57 Aligned_cols=37 Identities=30% Similarity=0.406 Sum_probs=29.5
Q ss_pred ccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCC
Q psy5844 131 ATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171 (442)
Q Consensus 131 ~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~ 171 (442)
.++|-+|+|..|.. +..++.++.+.++|. ++..+-|+
T Consensus 23 ~~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 59 (83)
T 2p5m_A 23 SASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGD 59 (83)
T ss_dssp EETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 48999999988655 678888998887775 88888764
No 119
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=20.13 E-value=22 Score=28.79 Aligned_cols=61 Identities=16% Similarity=0.107 Sum_probs=38.1
Q ss_pred HHHHHH-hCCCCCcEEeec-CCc-cchhhhhcCCCccEEeecCC-------HHHHHHHHhhccCCCCceeeee
Q psy5844 152 GALIAE-AGIPEGVVNIVP-GYG-DAGAALVQHPGVDKVAFTGS-------TEVGKLVQQGSGASNLKRTTLE 214 (442)
Q Consensus 152 ~~~l~~-aglp~~~~~~v~-~~~-~~~~~l~~~~~v~~v~ftGs-------~~~~~~i~~~~~~~~~~~~~~e 214 (442)
++.|.+ .|++...++=++ +.. ++.+.+. +-.+++|+||-+ ..-+..|++.|. ....|+...
T Consensus 41 a~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~-~geIdlVInt~~pl~~~~h~~D~~~IrR~A~-~~~IP~~T~ 111 (134)
T 2xw6_A 41 GRRIEEATGLTVEKLLSGPLGGDQQMGARVA-EGRILAVIFFRDPLTAQPHEPDVQALLRVCD-VHGVPLATN 111 (134)
T ss_dssp HHHHHHHHCCCCEECSCGGGTHHHHHHHHHH-TTCEEEEEEECCTTTCCTTSCCSHHHHHHHH-HHTCCEECS
T ss_pred HHHHHHhhCceEEEEEecCCCCcchHHHHHH-CCCccEEEEccCcccCCCccchHHHHHHHHH-HcCCCeEcC
Confidence 355666 799987776665 433 5655555 457999999877 223456666665 244454443
Done!