Query psy5845
Match_columns 87
No_of_seqs 161 out of 1244
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 19:31:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5845.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5845hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 99.8 8.3E-20 2.9E-24 127.3 9.8 85 3-87 299-387 (490)
2 3ifg_A Succinate-semialdehyde 99.8 1.8E-19 6.2E-24 125.4 10.4 85 3-87 304-388 (484)
3 2o2p_A Formyltetrahydrofolate 99.8 2.1E-19 7.1E-24 125.9 10.6 85 3-87 335-419 (517)
4 4e3x_A Delta-1-pyrroline-5-car 99.8 2.5E-19 8.7E-24 126.5 10.7 85 3-87 361-447 (563)
5 3ros_A NAD-dependent aldehyde 99.8 2E-19 7E-24 125.1 9.8 85 3-87 278-362 (484)
6 3rh9_A Succinate-semialdehyde 99.8 3.7E-19 1.3E-23 124.4 9.5 85 3-87 303-388 (506)
7 3iwj_A Putative aminoaldehyde 99.8 4.6E-19 1.6E-23 123.8 9.9 85 3-87 307-393 (503)
8 1o04_A Aldehyde dehydrogenase, 99.8 5.1E-19 1.7E-23 123.6 9.9 85 3-87 315-399 (500)
9 4f3x_A Putative aldehyde dehyd 99.8 3.7E-19 1.3E-23 124.2 9.1 85 3-87 316-401 (498)
10 3ed6_A Betaine aldehyde dehydr 99.8 5.9E-19 2E-23 123.7 10.0 85 3-87 326-414 (520)
11 1bxs_A Aldehyde dehydrogenase; 99.8 5.7E-19 1.9E-23 123.3 9.8 85 3-87 316-400 (501)
12 3jz4_A Succinate-semialdehyde 99.8 9E-19 3.1E-23 121.7 10.8 85 3-87 301-385 (481)
13 2j6l_A Aldehyde dehydrogenase 99.8 7.3E-19 2.5E-23 122.7 9.9 85 3-87 316-400 (500)
14 3b4w_A Aldehyde dehydrogenase; 99.8 7.4E-19 2.5E-23 122.6 9.8 85 3-87 301-387 (495)
15 3u4j_A NAD-dependent aldehyde 99.8 7.7E-19 2.6E-23 123.3 9.9 85 3-87 317-402 (528)
16 3i44_A Aldehyde dehydrogenase; 99.8 8.3E-19 2.8E-23 122.4 9.7 85 3-87 316-403 (497)
17 3ek1_A Aldehyde dehydrogenase; 99.8 1E-18 3.5E-23 122.1 9.9 83 3-87 324-406 (504)
18 2imp_A Lactaldehyde dehydrogen 99.8 1.4E-18 4.8E-23 120.7 10.4 85 3-87 298-383 (479)
19 4e4g_A Methylmalonate-semialde 99.8 1.3E-18 4.6E-23 121.9 9.5 85 3-87 318-406 (521)
20 1wnd_A Putative betaine aldehy 99.8 1.7E-18 5.7E-23 120.8 9.8 84 3-87 314-399 (495)
21 3etf_A Putative succinate-semi 99.8 1.9E-18 6.5E-23 119.5 9.9 85 3-87 281-365 (462)
22 3qan_A 1-pyrroline-5-carboxyla 99.8 1.8E-18 6.2E-23 121.6 9.9 84 3-87 334-417 (538)
23 1a4s_A ALDH, betaine aldehyde 99.8 1.8E-18 6E-23 120.9 9.6 85 3-87 310-400 (503)
24 3k2w_A Betaine-aldehyde dehydr 99.8 1.4E-18 4.8E-23 121.2 8.3 85 3-87 304-392 (497)
25 3r31_A BADH, betaine aldehyde 99.8 2.4E-18 8.4E-23 120.5 8.9 85 3-87 305-392 (517)
26 2ve5_A BADH, betaine aldehyde 99.8 3.9E-18 1.3E-22 118.7 9.8 85 3-87 299-387 (490)
27 3pqa_A Lactaldehyde dehydrogen 99.8 5.4E-18 1.9E-22 118.0 10.2 81 3-87 288-368 (486)
28 2d4e_A 5-carboxymethyl-2-hydro 99.8 4.9E-18 1.7E-22 118.9 9.9 84 3-87 318-409 (515)
29 3prl_A NADP-dependent glyceral 99.8 5.7E-18 2E-22 118.4 10.1 81 3-87 306-386 (505)
30 2w8n_A Succinate-semialdehyde 99.8 3.7E-18 1.3E-22 118.8 9.0 84 3-87 305-390 (487)
31 3r64_A NAD dependent benzaldeh 99.8 6E-18 2.1E-22 118.3 9.7 82 3-87 307-388 (508)
32 1uxt_A Glyceraldehyde-3-phosph 99.7 6.1E-18 2.1E-22 118.1 9.1 82 3-87 310-395 (501)
33 1t90_A MMSDH, probable methylm 99.7 7.5E-18 2.6E-22 117.2 9.4 85 3-87 296-381 (486)
34 4dng_A Uncharacterized aldehyd 99.7 9.6E-18 3.3E-22 116.6 9.5 82 3-87 300-381 (485)
35 1uzb_A 1-pyrroline-5-carboxyla 99.7 7.9E-18 2.7E-22 117.9 9.0 83 3-87 335-417 (516)
36 3ty7_A Putative aldehyde dehyd 99.7 1.1E-17 3.7E-22 116.2 9.4 85 3-87 295-382 (478)
37 3ju8_A Succinylglutamic semial 99.7 1.7E-17 5.6E-22 115.6 10.0 84 3-87 296-380 (490)
38 1euh_A NADP dependent non phos 99.7 1E-17 3.6E-22 116.2 8.6 81 3-87 297-377 (475)
39 4h7n_A Aldehyde dehydrogenase; 99.7 1.3E-17 4.4E-22 115.8 8.3 85 3-87 279-364 (474)
40 2y53_A Aldehyde dehydrogenase 99.7 1.9E-17 6.6E-22 116.2 9.3 84 3-87 312-403 (534)
41 4f9i_A Proline dehydrogenase/d 99.7 4.2E-17 1.4E-21 121.2 9.1 84 3-87 828-911 (1026)
42 3sza_A Aldehyde dehydrogenase, 99.7 1.8E-16 6E-21 110.0 8.5 78 3-87 273-350 (469)
43 3haz_A Proline dehydrogenase; 99.5 4.9E-14 1.7E-18 104.7 7.7 80 3-87 807-886 (1001)
44 3lns_A Benzaldehyde dehydrogen 99.5 5.2E-14 1.8E-18 97.3 7.2 76 3-87 283-358 (457)
45 3v4c_A Aldehyde dehydrogenase 99.0 1.2E-10 4E-15 81.8 3.6 73 3-87 337-412 (528)
46 1ez0_A ALDH, aldehyde dehydrog 99.0 5.4E-10 1.8E-14 78.2 5.8 71 3-87 303-377 (510)
47 3k9d_A LMO1179 protein, aldehy 98.3 5.8E-08 2E-12 67.3 -1.4 58 3-60 264-329 (464)
48 3my7_A Alcohol dehydrogenase/a 98.1 1.2E-07 4.1E-12 65.5 -2.5 57 29-86 270-336 (452)
49 1vlu_A Gamma-glutamyl phosphat 96.3 0.00014 4.7E-09 50.5 -3.2 54 4-87 283-340 (468)
50 2h5g_A Delta 1-pyrroline-5-car 86.0 0.42 1.4E-05 33.1 2.3 35 44-87 301-335 (463)
51 1o20_A Gamma-glutamyl phosphat 63.9 0.78 2.7E-05 31.3 -1.3 48 32-87 274-322 (427)
52 3rzi_A Probable 3-deoxy-D-arab 63.6 13 0.00043 26.0 4.6 47 7-62 42-88 (462)
53 1dlw_A Hemoglobin; oxygen stor 63.3 16 0.00055 19.9 4.5 49 2-51 37-91 (116)
54 3aq9_A Group 1 truncated hemog 61.8 18 0.00061 19.9 4.4 48 3-51 43-96 (121)
55 2gkm_A TRHBN, hemoglobin-like 57.5 23 0.0008 20.0 4.5 50 2-51 50-104 (136)
56 1dly_A Hemoglobin; oxygen stor 53.6 32 0.0011 20.3 5.1 50 2-51 80-136 (164)
57 3epo_A Thiamine biosynthesis p 49.7 51 0.0017 23.9 5.8 57 2-59 355-414 (612)
58 2ksc_A Cyanoglobin; hemeprotei 48.5 31 0.0011 19.0 3.9 50 2-51 38-96 (123)
59 1oeg_A Apolipoprotein E; siali 43.4 13 0.00043 15.4 1.3 15 2-16 9-23 (26)
60 3o85_A Ribosomal protein L7AE; 38.3 53 0.0018 18.4 4.2 31 28-59 6-36 (122)
61 2xyk_A 2-ON-2 hemoglobin; oxyg 38.1 35 0.0012 19.2 3.1 49 2-51 45-103 (133)
62 3fxd_A Protein ICMQ; helix bun 35.5 43 0.0015 16.5 2.7 20 33-52 5-24 (57)
63 1z0j_B FYVE-finger-containing 35.4 44 0.0015 16.6 2.8 18 35-52 15-32 (59)
64 1s69_A Cyanoglobin, hemoglobin 35.1 57 0.0019 17.8 4.8 50 2-51 39-97 (124)
65 1yzm_A FYVE-finger-containing 33.0 45 0.0015 16.0 2.8 18 35-52 8-25 (51)
66 3ivz_A Nitrilase; alpha-beta s 32.0 56 0.0019 20.2 3.6 26 35-60 17-42 (262)
67 3m9y_A Triosephosphate isomera 31.9 93 0.0032 19.9 4.6 32 30-61 178-217 (254)
68 3omy_A Protein TRAM; DNA bindi 31.8 48 0.0017 16.0 3.3 24 30-53 5-28 (52)
69 2bmm_A Thermostable hemoglobin 31.5 31 0.0011 18.9 2.1 48 3-51 39-96 (123)
70 2jgq_A Triosephosphate isomera 31.3 43 0.0015 21.1 2.9 32 30-61 166-197 (233)
71 1dp3_A TRAM protein; helix-loo 30.6 28 0.00097 17.0 1.6 23 32-54 6-28 (55)
72 2ale_A SNU13, NHP2/L7AE family 29.9 81 0.0028 18.0 4.1 31 28-59 7-37 (134)
73 1z0k_B FYVE-finger-containing 29.4 60 0.0021 16.6 2.8 18 35-52 26-43 (69)
74 4f4h_A Glutamine dependent NAD 29.0 59 0.002 23.0 3.6 26 35-60 22-47 (565)
75 3hkx_A Amidase; alpha-beta-BET 28.6 68 0.0023 20.2 3.6 26 35-60 36-61 (283)
76 2gu0_A Nonstructural protein 2 28.0 80 0.0027 20.6 3.7 43 3-45 76-118 (312)
77 4g1k_A Triosephosphate isomera 27.8 1.1E+02 0.0039 19.7 4.5 32 30-61 200-235 (272)
78 2ig3_A Group III truncated hae 27.4 62 0.0021 18.1 2.9 49 3-51 43-96 (127)
79 2pju_A Propionate catabolism o 25.6 56 0.0019 20.3 2.7 23 39-61 141-163 (225)
80 2qrw_A Hemoglobin-like protein 25.6 46 0.0016 18.4 2.2 49 2-51 40-98 (128)
81 3v1a_A Computational design, M 25.2 64 0.0022 15.3 2.7 17 35-51 7-23 (48)
82 1uf5_A N-carbamyl-D-amino acid 25.1 85 0.0029 19.7 3.6 26 35-60 21-46 (303)
83 2q5c_A NTRC family transcripti 25.0 40 0.0014 20.3 1.9 23 39-61 129-151 (196)
84 1vr4_A Hypothetical protein AP 24.3 95 0.0032 16.9 3.6 34 27-60 48-81 (103)
85 2w1v_A Nitrilase-2, nitrilase 23.9 94 0.0032 19.3 3.6 25 35-59 18-42 (276)
86 3p8k_A Hydrolase, carbon-nitro 23.8 62 0.0021 20.3 2.7 26 35-60 36-61 (281)
87 4g0a_A Non-structural protein 22.9 36 0.0012 22.3 1.4 41 3-44 77-117 (317)
88 1yya_A Triosephosphate isomera 22.6 1.4E+02 0.0048 19.0 4.2 32 30-61 174-213 (250)
89 2a7o_A Huntingtin interacting 22.5 1.1E+02 0.0039 17.1 5.5 23 24-46 39-61 (112)
90 2ikf_A RNA uridylyl transferas 22.4 1.2E+02 0.0043 19.8 4.1 35 16-50 312-346 (353)
91 1aw2_A Triosephosphate isomera 22.1 1.1E+02 0.0036 19.6 3.5 32 30-61 177-215 (256)
92 3oz7_A Phosphoglycerate kinase 22.0 1.5E+02 0.0053 20.4 4.5 28 32-59 258-285 (417)
93 3ta6_A Triosephosphate isomera 22.0 1.7E+02 0.0057 18.9 4.5 32 30-61 180-219 (267)
94 4fh3_A Poly(A) RNA polymerase 22.0 1.5E+02 0.0052 19.1 4.4 33 17-49 298-330 (349)
95 2yc6_A Triosephosphate isomera 21.5 1.2E+02 0.0041 19.4 3.7 32 30-61 178-217 (257)
96 2btm_A TIM, protein (triosepho 21.3 1.6E+02 0.0054 18.8 4.2 32 30-61 174-213 (252)
97 3kxq_A Triosephosphate isomera 20.7 1.5E+02 0.0052 19.1 4.1 32 30-61 198-236 (275)
98 1tre_A Triosephosphate isomera 20.6 1.2E+02 0.004 19.4 3.5 32 30-61 175-213 (255)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=99.81 E-value=8.3e-20 Score=127.28 Aligned_cols=85 Identities=36% Similarity=0.527 Sum_probs=79.5
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceEeeEEEeeCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVR 78 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~----~~g~~i~Ptii~~v~ 78 (87)
|++|.++|+++++++++|+|.+++++||||||+.|++|+.++|++++++|+++++||.... .+|+|++||||.+++
T Consensus 299 ~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~ 378 (490)
T 2wme_A 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCR 378 (490)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCC
T ss_pred HHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCC
Confidence 6889999999999999999999999999999999999999999999999999999997532 358999999999999
Q ss_pred CCCcchhcC
Q psy5845 79 DDMKIAREE 87 (87)
Q Consensus 79 ~~~~i~~eE 87 (87)
++|++++||
T Consensus 379 ~~~~i~~eE 387 (490)
T 2wme_A 379 DDMTIVREE 387 (490)
T ss_dssp TTSHHHHSC
T ss_pred CCChhhhcc
Confidence 999999998
No 2
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=99.81 E-value=1.8e-19 Score=125.39 Aligned_cols=85 Identities=27% Similarity=0.395 Sum_probs=79.8
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
|++|.++|++.++++++|+|.++++++|||||+.|++|+.+++++++++|+++++||......|+|++|||+.+++++|+
T Consensus 304 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~ 383 (484)
T 3ifg_A 304 YDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMD 383 (484)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSG
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCCh
Confidence 68899999999999999999999999999999999999999999999999999999976434799999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 384 i~~eE 388 (484)
T 3ifg_A 384 VAKEE 388 (484)
T ss_dssp GGTSC
T ss_pred hhCCe
Confidence 99998
No 3
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=99.81 E-value=2.1e-19 Score=125.94 Aligned_cols=85 Identities=31% Similarity=0.488 Sum_probs=79.2
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
|++|.++|++.++++++|+|.+++++||||||+.|++|+.+++++++++|+++++||......|+|++||||.+++++|+
T Consensus 335 ~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~ 414 (517)
T 2o2p_A 335 HNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMY 414 (517)
T ss_dssp HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSG
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCCh
Confidence 58899999999999999999999999999999999999999999999999999999976433689999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 415 i~~eE 419 (517)
T 2o2p_A 415 IAKEE 419 (517)
T ss_dssp GGTSC
T ss_pred hhhcc
Confidence 99998
No 4
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=99.81 E-value=2.5e-19 Score=126.54 Aligned_cols=85 Identities=22% Similarity=0.384 Sum_probs=79.9
Q ss_pred hhHHHHHHHHhhccccccCC-CCCCCCccccCCHHHHHHHHHHHHHHHH-CCCeEEeCCcccCCCCceEeeEEEeeCCCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQG-LRAGTIWGRKIDKEQMDKILEFIESGKS-QGAQLVAGGGRAGDKGFYVQPTVFANVRDD 80 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~-~~~~~~~gpli~~~~~~rv~~~l~~a~~-~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~ 80 (87)
|++|.++|++.++++++|+| .++++++|||||+.+++|+.++|+++++ +|+++++||..+...|+|++|||+.+++++
T Consensus 361 ~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~ 440 (563)
T 4e3x_A 361 WPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQ 440 (563)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTT
T ss_pred HHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCC
Confidence 78999999999999999999 8999999999999999999999999996 899999999866557999999999999999
Q ss_pred CcchhcC
Q psy5845 81 MKIAREE 87 (87)
Q Consensus 81 ~~i~~eE 87 (87)
+++++||
T Consensus 441 ~~i~~eE 447 (563)
T 4e3x_A 441 EPIMKEE 447 (563)
T ss_dssp CGGGTSC
T ss_pred ChhhcCC
Confidence 9999998
No 5
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=99.80 E-value=2e-19 Score=125.15 Aligned_cols=85 Identities=15% Similarity=0.190 Sum_probs=79.7
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
+++|.++|++.++++++|+|.++++++|||||+.|++|+.+++++++++|+++++||...+..|+|++|||+.+++++|+
T Consensus 278 ~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~ 357 (484)
T 3ros_A 278 YDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNP 357 (484)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTST
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCc
Confidence 58899999999999999999999999999999999999999999999999999999875445799999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 358 i~~eE 362 (484)
T 3ros_A 358 VFDKE 362 (484)
T ss_dssp TTTSC
T ss_pred ccccc
Confidence 99998
No 6
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=99.79 E-value=3.7e-19 Score=124.39 Aligned_cols=85 Identities=27% Similarity=0.343 Sum_probs=79.4
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCC-CCceEeeEEEeeCCCCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD-KGFYVQPTVFANVRDDM 81 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~-~g~~i~Ptii~~v~~~~ 81 (87)
+++|.++|++.++++++|+|.++++++|||||++|++|+.+++++++++|+++++||...+. .|+|++|||+.+++++|
T Consensus 303 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~ 382 (506)
T 3rh9_A 303 ADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREM 382 (506)
T ss_dssp HHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTS
T ss_pred HHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCC
Confidence 68899999999999999999999999999999999999999999999999999999975323 78999999999999999
Q ss_pred cchhcC
Q psy5845 82 KIAREE 87 (87)
Q Consensus 82 ~i~~eE 87 (87)
++++||
T Consensus 383 ~i~~eE 388 (506)
T 3rh9_A 383 CCYQEE 388 (506)
T ss_dssp HHHHSC
T ss_pred hhhccc
Confidence 999998
No 7
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=99.79 E-value=4.6e-19 Score=123.78 Aligned_cols=85 Identities=33% Similarity=0.542 Sum_probs=79.6
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccC--CCCceEeeEEEeeCCCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDD 80 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~--~~g~~i~Ptii~~v~~~ 80 (87)
+++|.++|++.++++++|+|.++++++|||||+.|++|+.+++++++++|+++++||.... ..|+|++|||+.+++++
T Consensus 307 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~ 386 (503)
T 3iwj_A 307 ATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTN 386 (503)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTT
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCC
Confidence 5889999999999999999999999999999999999999999999999999999997543 46899999999999999
Q ss_pred CcchhcC
Q psy5845 81 MKIAREE 87 (87)
Q Consensus 81 ~~i~~eE 87 (87)
|.+++||
T Consensus 387 ~~i~~eE 393 (503)
T 3iwj_A 387 MQIWREE 393 (503)
T ss_dssp SHHHHSC
T ss_pred chhhCce
Confidence 9999998
No 8
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=99.79 E-value=5.1e-19 Score=123.55 Aligned_cols=85 Identities=39% Similarity=0.680 Sum_probs=78.9
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
|++|.++|++.++++++|+|.++++++|||||++|++|+.+++++++++|+++++||......|+|++||||.+++++|+
T Consensus 315 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~ 394 (500)
T 1o04_A 315 YDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMT 394 (500)
T ss_dssp HHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSH
T ss_pred HHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCCh
Confidence 57899999999999999999999999999999999999999999999999999999976423689999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 395 i~~eE 399 (500)
T 1o04_A 395 IAKEE 399 (500)
T ss_dssp HHHSC
T ss_pred hhhCc
Confidence 99998
No 9
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=99.79 E-value=3.7e-19 Score=124.19 Aligned_cols=85 Identities=25% Similarity=0.370 Sum_probs=79.8
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCC-eEEeCCcccCCCCceEeeEEEeeCCCCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGA-QLVAGGGRAGDKGFYVQPTVFANVRDDM 81 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga-~i~~gg~~~~~~g~~i~Ptii~~v~~~~ 81 (87)
|++|.++|++.++++++|+|.++++++|||||+.|++|+.+++++++++|+ ++++||...+..|+|++|||+.+++++|
T Consensus 316 ~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~ 395 (498)
T 4f3x_A 316 YEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQED 395 (498)
T ss_dssp HHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTS
T ss_pred HHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCC
Confidence 688999999999999999999999999999999999999999999999999 9999997644579999999999999999
Q ss_pred cchhcC
Q psy5845 82 KIAREE 87 (87)
Q Consensus 82 ~i~~eE 87 (87)
++++||
T Consensus 396 ~i~~eE 401 (498)
T 4f3x_A 396 EIVRRE 401 (498)
T ss_dssp HHHHSC
T ss_pred hhhCCc
Confidence 999998
No 10
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=99.79 E-value=5.9e-19 Score=123.71 Aligned_cols=85 Identities=29% Similarity=0.452 Sum_probs=79.0
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceEeeEEEeeCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVR 78 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~----~~g~~i~Ptii~~v~ 78 (87)
|++|.++|++.++++++|+|.++++++|||||+.|++|+.+++++++++|+++++||.... ..|+|++||||.+++
T Consensus 326 ~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~ 405 (520)
T 3ed6_A 326 KDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCD 405 (520)
T ss_dssp HHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCC
T ss_pred HHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCC
Confidence 5788999999999999999999999999999999999999999999999999999997531 368999999999999
Q ss_pred CCCcchhcC
Q psy5845 79 DDMKIAREE 87 (87)
Q Consensus 79 ~~~~i~~eE 87 (87)
++|++++||
T Consensus 406 ~~~~i~~eE 414 (520)
T 3ed6_A 406 TSMRIVQEE 414 (520)
T ss_dssp TTSHHHHSC
T ss_pred CCCccccCc
Confidence 999999998
No 11
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=99.79 E-value=5.7e-19 Score=123.34 Aligned_cols=85 Identities=46% Similarity=0.751 Sum_probs=78.9
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
|++|.++|++.++++++|+|.++++++|||||++|++|+.+++++++++|+++++||......|+|++||||.+++++|.
T Consensus 316 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~ 395 (501)
T 1bxs_A 316 YDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMR 395 (501)
T ss_dssp HHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSH
T ss_pred HHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCH
Confidence 57899999999999999999999999999999999999999999999999999999876433689999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 396 i~~eE 400 (501)
T 1bxs_A 396 IAKEE 400 (501)
T ss_dssp HHHSC
T ss_pred HHhcc
Confidence 99998
No 12
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=99.79 E-value=9e-19 Score=121.72 Aligned_cols=85 Identities=27% Similarity=0.432 Sum_probs=79.5
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
|++|.++|++.++++++|+|.++++++||++|+.|++|+.+++++++++|+++++||...+..|+|++|||+.++++++.
T Consensus 301 ~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~ 380 (481)
T 3jz4_A 301 YDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAK 380 (481)
T ss_dssp HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSG
T ss_pred HHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcc
Confidence 68899999999999999999999999999999999999999999999999999999976434689999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 381 i~~eE 385 (481)
T 3jz4_A 381 VSKEE 385 (481)
T ss_dssp GGTSC
T ss_pred ccccc
Confidence 99998
No 13
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=99.79 E-value=7.3e-19 Score=122.72 Aligned_cols=85 Identities=24% Similarity=0.323 Sum_probs=79.1
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
|++|.++|++.++++++|+|.++++++|||+|+.|++|+.+++++++++|+++++||...+..|+|++|||+.+++++|.
T Consensus 316 ~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~ 395 (500)
T 2j6l_A 316 HDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDAS 395 (500)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCH
T ss_pred HHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcCh
Confidence 68899999999999999999999999999999999999999999999999999999975334689999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 396 i~~eE 400 (500)
T 2j6l_A 396 IAHTE 400 (500)
T ss_dssp HHHSC
T ss_pred hhcCc
Confidence 99998
No 14
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=99.78 E-value=7.4e-19 Score=122.58 Aligned_cols=85 Identities=34% Similarity=0.570 Sum_probs=78.9
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccC--CCCceEeeEEEeeCCCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDD 80 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~--~~g~~i~Ptii~~v~~~ 80 (87)
|++|.++|++.++++++|+|.++++++|||||++|++|+.+++++++++|+++++||.... ..|+|++||||.+++++
T Consensus 301 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~ 380 (495)
T 3b4w_A 301 YDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNK 380 (495)
T ss_dssp HHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCC
Confidence 5889999999999999999999999999999999999999999999999999999987542 25899999999999999
Q ss_pred CcchhcC
Q psy5845 81 MKIAREE 87 (87)
Q Consensus 81 ~~i~~eE 87 (87)
|++++||
T Consensus 381 ~~i~~eE 387 (495)
T 3b4w_A 381 MTIAQEE 387 (495)
T ss_dssp SHHHHSC
T ss_pred Chhhhcc
Confidence 9999998
No 15
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=99.78 E-value=7.7e-19 Score=123.30 Aligned_cols=85 Identities=34% Similarity=0.530 Sum_probs=79.5
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCC-CCceEeeEEEeeCCCCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD-KGFYVQPTVFANVRDDM 81 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~-~g~~i~Ptii~~v~~~~ 81 (87)
+++|.++|++.++++++|+|.++++++||+||++|++|+.+++++++++|+++++||..... .|+|++|||+.+++++|
T Consensus 317 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~ 396 (528)
T 3u4j_A 317 RDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDM 396 (528)
T ss_dssp HHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTS
T ss_pred HHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCC
Confidence 57899999999999999999999999999999999999999999999999999999976533 68999999999999999
Q ss_pred cchhcC
Q psy5845 82 KIAREE 87 (87)
Q Consensus 82 ~i~~eE 87 (87)
++++||
T Consensus 397 ~i~~eE 402 (528)
T 3u4j_A 397 SIAREE 402 (528)
T ss_dssp HHHHSC
T ss_pred ccccce
Confidence 999998
No 16
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=99.78 E-value=8.3e-19 Score=122.42 Aligned_cols=85 Identities=42% Similarity=0.692 Sum_probs=78.4
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCc-ccC--CCCceEeeEEEeeCCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGG-RAG--DKGFYVQPTVFANVRD 79 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~-~~~--~~g~~i~Ptii~~v~~ 79 (87)
|++|.++|++.++++++|+|.++++++|||||+.|++|+.+++++++++|+++++||. ... ..|+|++|||+.++++
T Consensus 316 ~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~ 395 (497)
T 3i44_A 316 YDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKP 395 (497)
T ss_dssp HHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCT
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCC
Confidence 5889999999999999999999999999999999999999999999999999999994 321 2689999999999999
Q ss_pred CCcchhcC
Q psy5845 80 DMKIAREE 87 (87)
Q Consensus 80 ~~~i~~eE 87 (87)
+|++++||
T Consensus 396 ~~~i~~eE 403 (497)
T 3i44_A 396 HMRIFREE 403 (497)
T ss_dssp TSHHHHSC
T ss_pred CCHHHcCc
Confidence 99999998
No 17
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=99.78 E-value=1e-18 Score=122.13 Aligned_cols=83 Identities=29% Similarity=0.482 Sum_probs=78.3
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
|++|.++|++.++++++|+|.++++++||+||++|++|+.+++++++++|+++++||... .|+|++|||+.+++++|+
T Consensus 324 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~--~g~~~~PTvl~~v~~~~~ 401 (504)
T 3ek1_A 324 YDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL--GGLFFEPGILTGVTSDML 401 (504)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEE--ETTEECCEEEEEECTTSG
T ss_pred HHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCceECCeEEecCCCcCh
Confidence 578899999999999999999999999999999999999999999999999999999752 689999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 402 i~~eE 406 (504)
T 3ek1_A 402 VAKEE 406 (504)
T ss_dssp GGTSC
T ss_pred hhccc
Confidence 99998
No 18
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=99.78 E-value=1.4e-18 Score=120.71 Aligned_cols=85 Identities=20% Similarity=0.354 Sum_probs=78.5
Q ss_pred hhHHHHHHHHhhccccccCCCC-CCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLR-AGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDM 81 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~-~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~ 81 (87)
|++|.++|++.++++++|+|.+ +++++|||||+.|++|+.+++++++++|+++++||...+..|+|++|||+.+++++|
T Consensus 298 ~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~ 377 (479)
T 2imp_A 298 YDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEM 377 (479)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTS
T ss_pred HHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCC
Confidence 5889999999999999999998 899999999999999999999999999999999987532368999999999999999
Q ss_pred cchhcC
Q psy5845 82 KIAREE 87 (87)
Q Consensus 82 ~i~~eE 87 (87)
++++||
T Consensus 378 ~~~~eE 383 (479)
T 2imp_A 378 SIMHEE 383 (479)
T ss_dssp GGGGSC
T ss_pred HHHhCc
Confidence 999998
No 19
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=99.77 E-value=1.3e-18 Score=121.93 Aligned_cols=85 Identities=24% Similarity=0.284 Sum_probs=78.5
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCccc----CCCCceEeeEEEeeCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRA----GDKGFYVQPTVFANVR 78 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~----~~~g~~i~Ptii~~v~ 78 (87)
|++|.++|++.++++++|+|.++++++||+||+.|++|+.+++++++++|+++++||... ...|+|++||||.+++
T Consensus 318 ~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~ 397 (521)
T 4e4g_A 318 ANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVT 397 (521)
T ss_dssp HHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCC
T ss_pred HHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCC
Confidence 678899999999999999999999999999999999999999999999999999999642 1468999999999999
Q ss_pred CCCcchhcC
Q psy5845 79 DDMKIAREE 87 (87)
Q Consensus 79 ~~~~i~~eE 87 (87)
++|++++||
T Consensus 398 ~~~~i~~eE 406 (521)
T 4e4g_A 398 PDMDIYKTE 406 (521)
T ss_dssp TTSHHHHSC
T ss_pred CCCHhhcCc
Confidence 999999998
No 20
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=99.77 E-value=1.7e-18 Score=120.83 Aligned_cols=84 Identities=20% Similarity=0.301 Sum_probs=78.5
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCC-CeEEeCCc-ccCCCCceEeeEEEeeCCCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQG-AQLVAGGG-RAGDKGFYVQPTVFANVRDD 80 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~G-a~i~~gg~-~~~~~g~~i~Ptii~~v~~~ 80 (87)
|++|.++|++.++++++|+|.+++++||||||+.|++|+.+++++++++| +++++||. .. ..|+|++|||+.+++++
T Consensus 314 ~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~ 392 (495)
T 1wnd_A 314 YDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQD 392 (495)
T ss_dssp HHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTT
T ss_pred HHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCC
Confidence 68899999999999999999999999999999999999999999999999 99999987 53 36899999999999999
Q ss_pred CcchhcC
Q psy5845 81 MKIAREE 87 (87)
Q Consensus 81 ~~i~~eE 87 (87)
|++++||
T Consensus 393 ~~i~~eE 399 (495)
T 1wnd_A 393 DAIVQKE 399 (495)
T ss_dssp SHHHHSC
T ss_pred Chhhhcc
Confidence 9999998
No 21
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=99.77 E-value=1.9e-18 Score=119.50 Aligned_cols=85 Identities=21% Similarity=0.242 Sum_probs=79.4
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
|++|.++|++.++++++|+|.++++++|||+++.|++|+.+++++++++|+++++||...+..|+|++|||+.+++++++
T Consensus 281 ~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~ 360 (462)
T 3etf_A 281 AQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMT 360 (462)
T ss_dssp HHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSH
T ss_pred HHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCCh
Confidence 57889999999999999999999999999999999999999999999999999999975445799999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 361 ~~~eE 365 (462)
T 3etf_A 361 AFRQE 365 (462)
T ss_dssp HHHSC
T ss_pred hhcCc
Confidence 99998
No 22
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=99.77 E-value=1.8e-18 Score=121.64 Aligned_cols=84 Identities=31% Similarity=0.535 Sum_probs=78.6
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
|++|.++|++.++++++|+|.++++++||+||+.|++|+.+++++++++| ++++||......|+|++|||+.+++++|+
T Consensus 334 ~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~ 412 (538)
T 3qan_A 334 YDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAV 412 (538)
T ss_dssp HHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSH
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCCh
Confidence 58899999999999999999999999999999999999999999999999 99999976533799999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 413 i~~eE 417 (538)
T 3qan_A 413 IMQEE 417 (538)
T ss_dssp HHHSC
T ss_pred hhCCC
Confidence 99998
No 23
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=99.77 E-value=1.8e-18 Score=120.89 Aligned_cols=85 Identities=32% Similarity=0.486 Sum_probs=78.6
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCccc--C----CCCceEeeEEEee
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRA--G----DKGFYVQPTVFAN 76 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~--~----~~g~~i~Ptii~~ 76 (87)
|++|.++|++.++++++|+|.++++++|||||+.|++|+.+++++++++|+++++||... . ..|+|++|||+.+
T Consensus 310 ~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~ 389 (503)
T 1a4s_A 310 MPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDN 389 (503)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEES
T ss_pred HHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEec
Confidence 588999999999999999999999999999999999999999999999999999998753 1 2589999999999
Q ss_pred CCCCCcchhcC
Q psy5845 77 VRDDMKIAREE 87 (87)
Q Consensus 77 v~~~~~i~~eE 87 (87)
++++|++++||
T Consensus 390 v~~~~~i~~eE 400 (503)
T 1a4s_A 390 CRDDMTCVKEE 400 (503)
T ss_dssp CCTTSHHHHSC
T ss_pred CCCCCHHHhcc
Confidence 99999999998
No 24
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=99.76 E-value=1.4e-18 Score=121.22 Aligned_cols=85 Identities=25% Similarity=0.365 Sum_probs=76.9
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcc--cCC--CCceEeeEEEeeCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGR--AGD--KGFYVQPTVFANVR 78 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~--~~~--~g~~i~Ptii~~v~ 78 (87)
|++|.++|++.++++++|+|.++++++||+||++|++|+.+++++++++|+++++||.. .+. .|+|+.|||+.+++
T Consensus 304 ~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~ 383 (497)
T 3k2w_A 304 YDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVK 383 (497)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCC
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCC
Confidence 68899999999999999999999999999999999999999999999999999999973 222 68999999999999
Q ss_pred CCCcchhcC
Q psy5845 79 DDMKIAREE 87 (87)
Q Consensus 79 ~~~~i~~eE 87 (87)
++|++++||
T Consensus 384 ~~~~i~~eE 392 (497)
T 3k2w_A 384 QDNIVVHEE 392 (497)
T ss_dssp TTSHHHHSC
T ss_pred CCcHhhcCC
Confidence 999999998
No 25
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=99.76 E-value=2.4e-18 Score=120.53 Aligned_cols=85 Identities=42% Similarity=0.603 Sum_probs=78.1
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccC---CCCceEeeEEEeeCCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAG---DKGFYVQPTVFANVRD 79 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~---~~g~~i~Ptii~~v~~ 79 (87)
+++|.++|++.++++++|+|.++++++|||||++|++|+.++|++++++|+++++||...+ ..|+|+.|||+.++++
T Consensus 305 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~ 384 (517)
T 3r31_A 305 KARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTD 384 (517)
T ss_dssp HHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECT
T ss_pred HHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCC
Confidence 5889999999999999999999999999999999999999999999999999999993121 3689999999999999
Q ss_pred CCcchhcC
Q psy5845 80 DMKIAREE 87 (87)
Q Consensus 80 ~~~i~~eE 87 (87)
+|++++||
T Consensus 385 ~~~i~~eE 392 (517)
T 3r31_A 385 DMTIAREE 392 (517)
T ss_dssp TSHHHHSC
T ss_pred CCccccce
Confidence 99999998
No 26
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=99.76 E-value=3.9e-18 Score=118.69 Aligned_cols=85 Identities=36% Similarity=0.527 Sum_probs=78.8
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccC----CCCceEeeEEEeeCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVR 78 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~----~~g~~i~Ptii~~v~ 78 (87)
|++|.++|++.++++++|+|.++++++||+||+.|++|+.+++++++++|+++++||.... ..|+|++|||+.+++
T Consensus 299 ~d~f~~~l~~~~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~ 378 (490)
T 2ve5_A 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCR 378 (490)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCC
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCC
Confidence 5789999999999999999999999999999999999999999999999999999987521 368999999999999
Q ss_pred CCCcchhcC
Q psy5845 79 DDMKIAREE 87 (87)
Q Consensus 79 ~~~~i~~eE 87 (87)
++|++++||
T Consensus 379 ~~~~i~~eE 387 (490)
T 2ve5_A 379 DDMTIVREE 387 (490)
T ss_dssp TTSHHHHSC
T ss_pred CCCccccce
Confidence 999999998
No 27
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=99.76 E-value=5.4e-18 Score=118.04 Aligned_cols=81 Identities=22% Similarity=0.252 Sum_probs=76.7
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
|++|.++|++.++++++|+|.++++++|||||+.|++|+.+++++++++|+++++||.. .|+|++|||+ +++++|+
T Consensus 288 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~ 363 (486)
T 3pqa_A 288 ADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNI 363 (486)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSG
T ss_pred HHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCCh
Confidence 58899999999999999999999999999999999999999999999999999999964 5799999999 9999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 364 i~~eE 368 (486)
T 3pqa_A 364 LCKTE 368 (486)
T ss_dssp GGTCC
T ss_pred hhccc
Confidence 99998
No 28
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=99.76 E-value=4.9e-18 Score=118.93 Aligned_cols=84 Identities=35% Similarity=0.556 Sum_probs=77.4
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccC--------CCCceEeeEEE
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--------DKGFYVQPTVF 74 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~--------~~g~~i~Ptii 74 (87)
|++|.++|++.++++++|+|.++++++|||||++|++|+.++|++++++|+++++||.... ..|+|++|||+
T Consensus 318 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl 397 (515)
T 2d4e_A 318 FEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVF 397 (515)
T ss_dssp HHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEE
T ss_pred HHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEE
Confidence 5789999999999999999999999999999999999999999999999999999997542 25899999999
Q ss_pred eeCCCCCcchhcC
Q psy5845 75 ANVRDDMKIAREE 87 (87)
Q Consensus 75 ~~v~~~~~i~~eE 87 (87)
.+ +++|.+++||
T Consensus 398 ~~-~~~~~i~~eE 409 (515)
T 2d4e_A 398 VG-ENHMKIAQEE 409 (515)
T ss_dssp EC-CTTSHHHHSC
T ss_pred eC-CCCChhhhcc
Confidence 99 9999999998
No 29
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=99.75 E-value=5.7e-18 Score=118.37 Aligned_cols=81 Identities=25% Similarity=0.294 Sum_probs=76.4
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
|++|.++|++.++++++|+|. +++++||+||++|++|+.+++++++++|+++++||.. .|+|++|||+.+++++|+
T Consensus 306 ~d~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~ 381 (505)
T 3prl_A 306 ADQLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMR 381 (505)
T ss_dssp HHHHHHHHHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSG
T ss_pred HHHHHHHHHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCCh
Confidence 578899999999999999998 8999999999999999999999999999999999973 589999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 382 i~~eE 386 (505)
T 3prl_A 382 VAWEE 386 (505)
T ss_dssp GGTSC
T ss_pred hhcCC
Confidence 99998
No 30
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=99.75 E-value=3.7e-18 Score=118.85 Aligned_cols=84 Identities=29% Similarity=0.430 Sum_probs=78.1
Q ss_pred hhHHHHHHHHhhcc-ccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCc-eEeeEEEeeCCCC
Q psy5845 3 WTSAAVFTKDLDKT-NYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGF-YVQPTVFANVRDD 80 (87)
Q Consensus 3 ~~~~~~~l~~~~~~-~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~-~i~Ptii~~v~~~ 80 (87)
|++|.++|++.+++ +++|+|.++++++|||||+.|++|+.+++++++++|+++++||... ..|+ |++|||+.+++++
T Consensus 305 ~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~ 383 (487)
T 2w8n_A 305 HDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQD 383 (487)
T ss_dssp HHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGG
T ss_pred HHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCc
Confidence 57889999999999 9999999999999999999999999999999999999999999764 3688 9999999999999
Q ss_pred CcchhcC
Q psy5845 81 MKIAREE 87 (87)
Q Consensus 81 ~~i~~eE 87 (87)
|++++||
T Consensus 384 ~~i~~eE 390 (487)
T 2w8n_A 384 MLCTHEE 390 (487)
T ss_dssp GGTTCTT
T ss_pred chhhhcc
Confidence 9999998
No 31
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=99.75 E-value=6e-18 Score=118.29 Aligned_cols=82 Identities=32% Similarity=0.365 Sum_probs=77.5
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
|++|.++|++.++++++|+|.++++++|||||+.|++|+.+++++++++|+++++||.. .|+|+.|||+.+++++++
T Consensus 307 ~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~ 383 (508)
T 3r64_A 307 HDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDME 383 (508)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSG
T ss_pred HHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCCh
Confidence 57889999999999999999999999999999999999999999999999999999975 589999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 384 i~~eE 388 (508)
T 3r64_A 384 IAREE 388 (508)
T ss_dssp GGTSC
T ss_pred hhccc
Confidence 99998
No 32
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=99.75 E-value=6.1e-18 Score=118.12 Aligned_cols=82 Identities=24% Similarity=0.310 Sum_probs=77.0
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCC-ceEeeEEEeeCC---
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKG-FYVQPTVFANVR--- 78 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g-~~i~Ptii~~v~--- 78 (87)
+++|.++|++.++++++|+|.++++++|||||+.|++|+.+++++++++|+++++||.. .| +|++|||+.+++
T Consensus 310 ~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~ 386 (501)
T 1uxt_A 310 YGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRV 386 (501)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHH
T ss_pred HHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCC
Confidence 57899999999999999999999999999999999999999999999999999999865 57 999999999999
Q ss_pred CCCcchhcC
Q psy5845 79 DDMKIAREE 87 (87)
Q Consensus 79 ~~~~i~~eE 87 (87)
++|.+++||
T Consensus 387 ~~~~i~~eE 395 (501)
T 1uxt_A 387 KDMVLYKRE 395 (501)
T ss_dssp TTSHHHHSC
T ss_pred CcCHHHhCc
Confidence 999999998
No 33
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=99.74 E-value=7.5e-18 Score=117.25 Aligned_cols=85 Identities=29% Similarity=0.518 Sum_probs=78.1
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCccc-CCCCceEeeEEEeeCCCCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRA-GDKGFYVQPTVFANVRDDM 81 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~-~~~g~~i~Ptii~~v~~~~ 81 (87)
|++|.++|++.++++++|+|.++++++||+||+.|++|+.+++++++++|+++++||... ...|+|++|||+.+++++|
T Consensus 296 ~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~ 375 (486)
T 1t90_A 296 ADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEM 375 (486)
T ss_dssp HHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTS
T ss_pred HHHHHHHHHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCC
Confidence 578999999999999999999999999999999999999999999999999999998642 1358999999999999999
Q ss_pred cchhcC
Q psy5845 82 KIAREE 87 (87)
Q Consensus 82 ~i~~eE 87 (87)
++++||
T Consensus 376 ~~~~eE 381 (486)
T 1t90_A 376 TIWKDE 381 (486)
T ss_dssp HHHHSC
T ss_pred HhhcCc
Confidence 999998
No 34
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=99.74 E-value=9.6e-18 Score=116.61 Aligned_cols=82 Identities=28% Similarity=0.353 Sum_probs=77.3
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
+++|.++|++.++++++|+|.++++++||++|+.|++|+.+++++++++|+++++||.. .|+|++|||+.+++++++
T Consensus 300 ~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~ 376 (485)
T 4dng_A 300 YDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSK 376 (485)
T ss_dssp HHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSH
T ss_pred HHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCCh
Confidence 57888999999999999999999999999999999999999999999999999999975 589999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 377 i~~eE 381 (485)
T 4dng_A 377 IAQTE 381 (485)
T ss_dssp HHHCC
T ss_pred hhcCc
Confidence 99998
No 35
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=99.74 E-value=7.9e-18 Score=117.86 Aligned_cols=83 Identities=33% Similarity=0.511 Sum_probs=76.0
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
|++|.++|++.++++++|+| ++++++|||||+.|++|+.+++++++++| ++++||......|+|++|||+.+++++|+
T Consensus 335 ~d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~ 412 (516)
T 1uzb_A 335 YEPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKAR 412 (516)
T ss_dssp HHHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSG
T ss_pred HHHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCH
Confidence 57899999999999999999 88999999999999999999999999888 88899875323689999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 413 i~~eE 417 (516)
T 1uzb_A 413 IAQEE 417 (516)
T ss_dssp GGTSC
T ss_pred hhhcc
Confidence 99998
No 36
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=99.74 E-value=1.1e-17 Score=116.21 Aligned_cols=85 Identities=33% Similarity=0.495 Sum_probs=78.1
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCccc-C--CCCceEeeEEEeeCCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRA-G--DKGFYVQPTVFANVRD 79 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~-~--~~g~~i~Ptii~~v~~ 79 (87)
+++|.++|++.++++++|+|.++++++|||+|++|++|+.+++++++++|+++++||... . ..|+|++|||+.++++
T Consensus 295 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~ 374 (478)
T 3ty7_A 295 KDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDN 374 (478)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCT
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCC
Confidence 588999999999999999999999999999999999999999999999999999998422 1 3689999999999999
Q ss_pred CCcchhcC
Q psy5845 80 DMKIAREE 87 (87)
Q Consensus 80 ~~~i~~eE 87 (87)
++++++||
T Consensus 375 ~~~~~~eE 382 (478)
T 3ty7_A 375 QMTIAQEE 382 (478)
T ss_dssp TSHHHHSC
T ss_pred CCcccCce
Confidence 99999998
No 37
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=99.73 E-value=1.7e-17 Score=115.63 Aligned_cols=84 Identities=17% Similarity=0.108 Sum_probs=77.9
Q ss_pred hhHHHHHHHHhhccccccC-CCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQ-GLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDM 81 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~-~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~ 81 (87)
+++|.++|++.++++++|+ |.++++++|||+++.|++|+.+++++++++|+++++||...+..|+|++|||+. +++++
T Consensus 296 ~d~f~~~l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~ 374 (490)
T 3ju8_A 296 GDALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVA 374 (490)
T ss_dssp HHHHHHHHHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCS
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCC
Confidence 4789999999999999999 999999999999999999999999999999999999987544579999999998 99999
Q ss_pred cchhcC
Q psy5845 82 KIAREE 87 (87)
Q Consensus 82 ~i~~eE 87 (87)
.+++||
T Consensus 375 ~i~~eE 380 (490)
T 3ju8_A 375 ERPDEE 380 (490)
T ss_dssp SCCCCC
T ss_pred cccccc
Confidence 999998
No 38
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=99.73 E-value=1e-17 Score=116.23 Aligned_cols=81 Identities=20% Similarity=0.211 Sum_probs=75.9
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
+++|.++|++.++++++|+|.+ ++++|||+|+.|++|+.+++++++++|+++++||.. .|+|++|||+.+++++|+
T Consensus 297 ~d~f~~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~ 372 (475)
T 1euh_A 297 ADELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMR 372 (475)
T ss_dssp HHHHHHHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSG
T ss_pred HHHHHHHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCH
Confidence 5788999999999999999988 899999999999999999999999999999999865 489999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 373 ~~~eE 377 (475)
T 1euh_A 373 LAWEE 377 (475)
T ss_dssp GGTSC
T ss_pred HHcCc
Confidence 99998
No 39
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=99.73 E-value=1.3e-17 Score=115.76 Aligned_cols=85 Identities=24% Similarity=0.280 Sum_probs=79.0
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccC-CCCceEeeEEEeeCCCCC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAG-DKGFYVQPTVFANVRDDM 81 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~-~~g~~i~Ptii~~v~~~~ 81 (87)
|++|.+++++.++++++|+|.++++++||+||+.|++|+.+++++++++|++++.||.... ..|+|++|||+.++++++
T Consensus 279 ~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~ 358 (474)
T 4h7n_A 279 FEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSM 358 (474)
T ss_dssp HHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTS
T ss_pred HHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeecccc
Confidence 6789999999999999999999999999999999999999999999999999999987542 468999999999999999
Q ss_pred cchhcC
Q psy5845 82 KIAREE 87 (87)
Q Consensus 82 ~i~~eE 87 (87)
++++||
T Consensus 359 ~i~~eE 364 (474)
T 4h7n_A 359 KVMTEE 364 (474)
T ss_dssp GGGTSC
T ss_pred cccccc
Confidence 999998
No 40
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=99.73 E-value=1.9e-17 Score=116.25 Aligned_cols=84 Identities=17% Similarity=0.102 Sum_probs=75.6
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCccc-----C-CCCceEeeEEEee
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRA-----G-DKGFYVQPTVFAN 76 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~-----~-~~g~~i~Ptii~~ 76 (87)
|++|.++|++.++++++|+|.+++++||||||+.|++|+.++|+++ .+|+++++||... . ..|+|++||||.+
T Consensus 312 ~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~ 390 (534)
T 2y53_A 312 LEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVV 390 (534)
T ss_dssp HHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEEC
T ss_pred HHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEe
Confidence 6889999999999999999999999999999999999999999999 6899999988642 1 3589999999999
Q ss_pred CCCC--CcchhcC
Q psy5845 77 VRDD--MKIAREE 87 (87)
Q Consensus 77 v~~~--~~i~~eE 87 (87)
++++ +.+++||
T Consensus 391 v~~~~~~~i~~eE 403 (534)
T 2y53_A 391 NDPDNATLLHDVE 403 (534)
T ss_dssp SCGGGCSSTTTCC
T ss_pred cCccccCHHHhCC
Confidence 9877 6899998
No 41
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=99.70 E-value=4.2e-17 Score=121.17 Aligned_cols=84 Identities=21% Similarity=0.364 Sum_probs=77.9
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
|++|.++|++.++++++|+|.+.++++||+|++.+++++.++|++++++| ++++||..+...|+|++|||+.++++++.
T Consensus 828 ~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~ 906 (1026)
T 4f9i_A 828 YDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHR 906 (1026)
T ss_dssp HHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSG
T ss_pred HHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCcc
Confidence 68899999999999999999999999999999999999999999999988 89999876533499999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 907 i~~eE 911 (1026)
T 4f9i_A 907 IAQEE 911 (1026)
T ss_dssp GGTSC
T ss_pred ccCce
Confidence 99998
No 42
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=99.67 E-value=1.8e-16 Score=110.05 Aligned_cols=78 Identities=19% Similarity=0.331 Sum_probs=71.2
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
+++|.++|++.++++ +|+|.++++++|||||++|++|+.+++ +|+++++||..+ ..|+|++|||+.+++++|+
T Consensus 273 ~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~ 345 (469)
T 3sza_A 273 QNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD-AATRYIAPTILTDVDPQSP 345 (469)
T ss_dssp HHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE-TTTTEECCEEEESCCTTSG
T ss_pred HHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC-CCCceeCCeeecCCCCcch
Confidence 578889999999988 599888899999999999999999998 599999999865 4789999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 346 i~~eE 350 (469)
T 3sza_A 346 VMQEE 350 (469)
T ss_dssp GGTSC
T ss_pred hhhcc
Confidence 99998
No 43
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=99.50 E-value=4.9e-14 Score=104.73 Aligned_cols=80 Identities=20% Similarity=0.217 Sum_probs=71.2
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
+++|.++|++.++++++|+|.++++++|||||+.+++++.++|++++++| ++ +||..+ ..|+|+.|||+.+ .++.
T Consensus 807 ~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~-~~G~fv~PTvl~~--~~~~ 881 (1001)
T 3haz_A 807 ADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPA-PEGCFVAPHIFEL--TEAG 881 (1001)
T ss_dssp HHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCC-CSSSCCCCEEEEC--SSGG
T ss_pred HHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccC-CCCcEEeeEEecC--CCHH
Confidence 47888999999999999999999999999999999999999999999887 78 877654 4699999999975 5788
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
++++|
T Consensus 882 ~~~eE 886 (1001)
T 3haz_A 882 QLTEE 886 (1001)
T ss_dssp GCCSC
T ss_pred HHhcc
Confidence 89887
No 44
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=99.49 E-value=5.2e-14 Score=97.35 Aligned_cols=76 Identities=16% Similarity=0.126 Sum_probs=66.5
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCc
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 82 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~ 82 (87)
+++|.++|++.+++++ |.++ ++|||||++|++|+.++++++ ++++++||..+ ..|+|++|||+.+++++|+
T Consensus 283 ~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~ 353 (457)
T 3lns_A 283 KDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDP 353 (457)
T ss_dssp HHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSG
T ss_pred HHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCCh
Confidence 5788999999999887 4554 899999999999999999975 36899998764 4689999999999999999
Q ss_pred chhcC
Q psy5845 83 IAREE 87 (87)
Q Consensus 83 i~~eE 87 (87)
+++||
T Consensus 354 i~~eE 358 (457)
T 3lns_A 354 LMSEE 358 (457)
T ss_dssp GGSSC
T ss_pred hhcCc
Confidence 99998
No 45
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=99.03 E-value=1.2e-10 Score=81.84 Aligned_cols=73 Identities=14% Similarity=0.064 Sum_probs=61.9
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCC--
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDD-- 80 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~-- 80 (87)
+++|.++|++.+++++.| +.+||++++.+.+++..+++ ++|+++++||.. .|+|++|||+.+++++
T Consensus 337 ~d~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~ 404 (528)
T 3v4c_A 337 ADRFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFL 404 (528)
T ss_dssp HHHHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHH
T ss_pred HHHHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccc
Confidence 578888888888888643 57999999999998888864 479999999974 6899999999988877
Q ss_pred -CcchhcC
Q psy5845 81 -MKIAREE 87 (87)
Q Consensus 81 -~~i~~eE 87 (87)
|.+++||
T Consensus 405 ~~~i~~eE 412 (528)
T 3v4c_A 405 ADHALGEE 412 (528)
T ss_dssp HCGGGGCC
T ss_pred cChhhccc
Confidence 8999998
No 46
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=99.00 E-value=5.4e-10 Score=78.23 Aligned_cols=71 Identities=11% Similarity=0.066 Sum_probs=60.6
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHH-HCCCeEEeCCcccCCCCceEeeEEEeeCCCC-
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGK-SQGAQLVAGGGRAGDKGFYVQPTVFANVRDD- 80 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~-~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~- 80 (87)
+++|.++|++.++++++ ||+++..+.+++.+++++++ .+|+++++||. .|+|++|||+.+++++
T Consensus 303 ~d~f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~ 368 (510)
T 1ez0_A 303 TQAFIETAQSLIRQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENW 368 (510)
T ss_dssp HHHHHHHHHHHHHHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHH
T ss_pred HHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCcc
Confidence 57788888888888763 57888889999999999988 47999999986 2899999999988777
Q ss_pred --CcchhcC
Q psy5845 81 --MKIAREE 87 (87)
Q Consensus 81 --~~i~~eE 87 (87)
+.+++||
T Consensus 369 ~~~~i~~eE 377 (510)
T 1ez0_A 369 RKHPAWEEE 377 (510)
T ss_dssp HHCGGGGSC
T ss_pred ccCHHHcCC
Confidence 9999998
No 47
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=98.27 E-value=5.8e-08 Score=67.29 Aligned_cols=58 Identities=7% Similarity=0.005 Sum_probs=47.6
Q ss_pred hhHHHHHHHHhh-------ccccccCCC-CCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCc
Q psy5845 3 WTSAAVFTKDLD-------KTNYVTQGL-RAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGG 60 (87)
Q Consensus 3 ~~~~~~~l~~~~-------~~~~~g~~~-~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~ 60 (87)
|++|.++|++.. +.+++|++. ++++++||+++.++++++.++++.++.+|+++++||.
T Consensus 264 ~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~ 329 (464)
T 3k9d_A 264 KEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEE 329 (464)
T ss_dssp HHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEEC
T ss_pred HHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCC
Confidence 466777777765 345678765 5678899999999999999999988889999999875
No 48
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=98.10 E-value=1.2e-07 Score=65.52 Aligned_cols=57 Identities=19% Similarity=0.218 Sum_probs=44.9
Q ss_pred ccccCCHHHHHHHHHHHHHHHHCCCeEEeCCccc---CCCCceEeeEE-------EeeCCCCCcchhc
Q psy5845 29 WGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRA---GDKGFYVQPTV-------FANVRDDMKIARE 86 (87)
Q Consensus 29 ~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~---~~~g~~i~Pti-------i~~v~~~~~i~~e 86 (87)
+||++++.+++|+.+++.++...|+++ +||... ...|+|++||+ +.++++++++++|
T Consensus 270 ~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~E 336 (452)
T 3my7_A 270 KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAHE 336 (452)
T ss_dssp TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGSC
T ss_pred CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhcC
Confidence 499999999999999998766667776 466532 12589999997 6688899998874
No 49
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=96.33 E-value=0.00014 Score=50.55 Aligned_cols=54 Identities=11% Similarity=-0.082 Sum_probs=29.8
Q ss_pred hHHHHHHHHhhccccc---cCCCCCCCCccccCCHHHHHHHHHH-HHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCC
Q psy5845 4 TSAAVFTKDLDKTNYV---TQGLRAGTIWGRKIDKEQMDKILEF-IESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRD 79 (87)
Q Consensus 4 ~~~~~~l~~~~~~~~~---g~~~~~~~~~gpli~~~~~~rv~~~-l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~ 79 (87)
++|.++|++.++++++ |+|.+ .++ ++++. ++++||. | +.||++ ++.
T Consensus 283 d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~ 332 (468)
T 1vlu_A 283 SKWWEVLENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE-----A--IQCKTV--DAD 332 (468)
T ss_dssp TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH-----H--HHTTBC-----
T ss_pred HHHHHHHHHHHHhcCCeecCCHHH-----------------hcccccccc----eeeccCC-----C--CCCcee--eCC
Confidence 5788899999999886 76532 344 66654 3566764 4 689887 778
Q ss_pred CCcchhcC
Q psy5845 80 DMKIAREE 87 (87)
Q Consensus 80 ~~~i~~eE 87 (87)
++.+++||
T Consensus 333 ~~~i~~eE 340 (468)
T 1vlu_A 333 EEQDFDKE 340 (468)
T ss_dssp --------
T ss_pred CchhhhcC
Confidence 89999998
No 50
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=86.00 E-value=0.42 Score=33.10 Aligned_cols=35 Identities=20% Similarity=0.196 Sum_probs=18.8
Q ss_pred HHHHHHHCCCeEEeCCcccCCCCceEeeEEEeeCCCCCcchhcC
Q psy5845 44 FIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE 87 (87)
Q Consensus 44 ~l~~a~~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~i~~eE 87 (87)
++++++++|++++.|+... ..++|+ +++|.+++||
T Consensus 301 ~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE 335 (463)
T 2h5g_A 301 IIDMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTE 335 (463)
T ss_dssp HHHHHHHTTCEEEECHHHH-C-----------------CCSSCC
T ss_pred HHHHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhcc
Confidence 5788888999998554322 234443 4678888887
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=63.94 E-value=0.78 Score=31.35 Aligned_cols=48 Identities=19% Similarity=0.243 Sum_probs=27.2
Q ss_pred cCCHHHHHHHHHHHHHHH-HCCCeEEeCCcccCCCCceEeeEEEeeCCCCCcchhcC
Q psy5845 32 KIDKEQMDKILEFIESGK-SQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE 87 (87)
Q Consensus 32 li~~~~~~rv~~~l~~a~-~~Ga~i~~gg~~~~~~g~~i~Ptii~~v~~~~~i~~eE 87 (87)
++.+.-++++...+.+.. +-+.. +.||... .+ |+ ||| . +.++.+++||
T Consensus 274 ~V~~~i~d~f~~~l~~~~~~~~~~-~~gg~~~--~~-~~-Ptl-~--~~~~~i~~eE 322 (427)
T 1o20_A 274 LVHEKIAKEFLPVIVEELRKHGVE-VRGCEKT--RE-IV-PDV-V--PATEDDWPTE 322 (427)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCE-EEECHHH--HH-HS-TTS-E--ECCGGGTTCC
T ss_pred EEehhhHHHHHHHHHHHHHHcCCe-eecChhh--hh-hC-Ccc-c--CCCcchhhcc
Confidence 567777777766554443 33333 3355432 23 44 885 3 3467899988
No 52
>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} SCOP: c.1.10.8 PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A*
Probab=63.62 E-value=13 Score=26.05 Aligned_cols=47 Identities=15% Similarity=0.018 Sum_probs=34.4
Q ss_pred HHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCccc
Q psy5845 7 AVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGGRA 62 (87)
Q Consensus 7 ~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~~ 62 (87)
...+....+.+. .+.||+.....+++++.+.++..--|=++.||.+.
T Consensus 42 ~~~l~~v~~~L~---------~~PPLV~a~Ei~~Lr~~La~va~G~AFlLQGGDCA 88 (462)
T 3rzi_A 42 ADQALAMRTVLE---------SVPPVTVPSEIVRLQEQLAQVAKGEAFLLQGGDCA 88 (462)
T ss_dssp HHHHHHHHHHHT---------TSCCSSCHHHHHHHHHHHHHHHTTSCEEEEEECSS
T ss_pred HHHHHHHHHHHH---------cCCCcCCHHHHHHHHHHHHHHHCCCEEEEeCcccc
Confidence 555666555553 46799999999999999987754346677788764
No 53
>1dlw_A Hemoglobin; oxygen storage/transport complex; HET: HEM; 1.54A {Paramecium caudatum} SCOP: a.1.1.1 PDB: 1uvy_A*
Probab=63.29 E-value=16 Score=19.88 Aligned_cols=49 Identities=8% Similarity=0.016 Sum_probs=31.6
Q ss_pred ChhHHHHHHHHhhccccccCCC-CCCCCcc-----ccCCHHHHHHHHHHHHHHHHC
Q psy5845 2 HWTSAAVFTKDLDKTNYVTQGL-RAGTIWG-----RKIDKEQMDKILEFIESGKSQ 51 (87)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~g~~~-~~~~~~g-----pli~~~~~~rv~~~l~~a~~~ 51 (87)
.|+....++..-+..+. |.|. .....|. -=|+..++++...++..+.++
T Consensus 37 d~~~~~~~l~~fl~~~~-gGp~~Y~g~~m~~~H~~~~I~~~~f~~wl~~~~~al~~ 91 (116)
T 1dlw_A 37 DMPNQTNKTAAFLCAAL-GGPNAWTGRNLKEVHANMGVSNAQFTTVIGHLRSALTG 91 (116)
T ss_dssp CHHHHHHHHHHHHHHHT-TCSSCCCSCCHHHHHTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHh-CCCccCCCcCHHHHhcCCCcCHHHHHHHHHHHHHHHHH
Confidence 36667777777777764 4333 2232332 138889999998888887765
No 54
>3aq9_A Group 1 truncated hemoglobin; 2/2 fold hemoglobin, nitric oxide detoxification, oxygen BIN; HET: HEM; 1.74A {Tetrahymena pyriformis} PDB: 3aq5_A* 3aq6_A* 3aq8_A* 3aq7_A*
Probab=61.83 E-value=18 Score=19.89 Aligned_cols=48 Identities=10% Similarity=0.039 Sum_probs=27.4
Q ss_pred hhHHHHHHHHhhccccccCCCCC-CCCcc-----ccCCHHHHHHHHHHHHHHHHC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRA-GTIWG-----RKIDKEQMDKILEFIESGKSQ 51 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~-~~~~g-----pli~~~~~~rv~~~l~~a~~~ 51 (87)
|+....++..-+..+. |.|... ...|. -=|+..+|++...++..+..+
T Consensus 43 ~~~~~~~l~~fl~~~~-gGp~~Y~g~~m~~~H~~~~I~~~~f~~wl~~~~~al~~ 96 (121)
T 3aq9_A 43 MDHQTKQETDFLTMLL-GGPNHYKGKNMTEAHKGMNLQNLHFDAIIENLAATLKE 96 (121)
T ss_dssp HHHHHHHHHHHHHHHT-TSCCCCCSCCHHHHTTTSCBCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-CCCCCCCCccHHHHhcCCCcCHHHHHHHHHHHHHHHHH
Confidence 5666666666666653 333221 22221 127778888887777777654
No 55
>2gkm_A TRHBN, hemoglobin-like protein HBN, flavohemoglobin; truncated hemoglobin, mutant, oxygen storage/transport complex; HET: HEM; 1.73A {Mycobacterium tuberculosis} PDB: 1idr_A* 1rte_A* 1s56_A* 1s61_A* 2gl3_A* 2gln_A* 2gkn_A*
Probab=57.51 E-value=23 Score=19.96 Aligned_cols=50 Identities=6% Similarity=-0.017 Sum_probs=32.6
Q ss_pred ChhHHHHHHHHhhccccccCCCCCCCCcc-----ccCCHHHHHHHHHHHHHHHHC
Q psy5845 2 HWTSAAVFTKDLDKTNYVTQGLRAGTIWG-----RKIDKEQMDKILEFIESGKSQ 51 (87)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~g-----pli~~~~~~rv~~~l~~a~~~ 51 (87)
.|+....++..-+..+.-|.....+..|. -=|+..+|++...++..+..+
T Consensus 50 d~~~~~~~l~~Fl~~~~GGp~~Y~g~~m~~~H~~~~I~~~~fd~wl~~l~~al~e 104 (136)
T 2gkm_A 50 NMSRLKGKQVEFFAAALGGPEPYTGAPMKQVHQGRGITMHHFSLVAGHLADALTA 104 (136)
T ss_dssp CHHHHHHHHHHHHHHHTTCSSCCCSCCHHHHHTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 46777778887777764333222222231 128999999999998888765
No 56
>1dly_A Hemoglobin; oxygen storage/transport complex; HET: HEM; 1.80A {Chlamydomonas eugametos} SCOP: a.1.1.1 PDB: 1uvx_A*
Probab=53.63 E-value=32 Score=20.31 Aligned_cols=50 Identities=2% Similarity=-0.093 Sum_probs=34.5
Q ss_pred ChhHHHHHHHHhhccccccCCCCCCCCcc----cc---CCHHHHHHHHHHHHHHHHC
Q psy5845 2 HWTSAAVFTKDLDKTNYVTQGLRAGTIWG----RK---IDKEQMDKILEFIESGKSQ 51 (87)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~g----pl---i~~~~~~rv~~~l~~a~~~ 51 (87)
.|+....++..-+..+.-|.....+..|. ++ |+..+|++...++..+..+
T Consensus 80 D~~~~~~kl~~Fl~~~lGGp~~Y~g~~m~~~H~~l~~~I~~~~fd~Wl~~~~~aL~e 136 (164)
T 1dly_A 80 DMKVQRSKQFAFLAYALGGASEWKGKDMRTAHKDLVPHLSDVHFQAVARHLSDTLTE 136 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTSSSCCCSCCHHHHHTTCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 47778888888887774333222232332 24 9999999999999888765
No 57
>3epo_A Thiamine biosynthesis protein THIC; alpha-beta barrel, SAM superfamily, biosynthetic protein; HET: MP5; 2.10A {Caulobacter crescentus} PDB: 3epm_A* 3epn_A*
Probab=49.73 E-value=51 Score=23.87 Aligned_cols=57 Identities=19% Similarity=0.323 Sum_probs=40.3
Q ss_pred ChhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHH---HHHHHHHHHCCCeEEeCC
Q psy5845 2 HWTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKI---LEFIESGKSQGAQLVAGG 59 (87)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv---~~~l~~a~~~Ga~i~~gg 59 (87)
||+.+-+.+++.--.|.+||.+.+++ +---.+++|+..+ -.+.+.|.++|.++..-|
T Consensus 355 ~FD~ileI~k~YDVtlSLGDglRPG~-iaDA~D~AQ~~EL~~LGELtkrAwe~gVQVMIEG 414 (612)
T 3epo_A 355 RFDEICEIMRAYDVSFSLGDGLRPGS-TADANDEAQFSELRTLGELTKVAWKHGVQVMIEG 414 (612)
T ss_dssp THHHHHHHHTTTTCEEEECCTTCCSS-GGGTTCHHHHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHhCeEEecccccCCCc-cccCCcHHHHHHHHHHHHHHHHHHHcCCcEEEEC
Confidence 56777777777666788899887654 3344577888655 456677889999988744
No 58
>2ksc_A Cyanoglobin; hemeprotein, 2/2 hemoglobin, GLBN, TRHBN, unknown function; HET: HEB; NMR {Synechococcus SP}
Probab=48.55 E-value=31 Score=19.00 Aligned_cols=50 Identities=12% Similarity=0.055 Sum_probs=34.5
Q ss_pred ChhHHHHHHHHhhccccccCCCCCCCCcc----cc-----CCHHHHHHHHHHHHHHHHC
Q psy5845 2 HWTSAAVFTKDLDKTNYVTQGLRAGTIWG----RK-----IDKEQMDKILEFIESGKSQ 51 (87)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~g----pl-----i~~~~~~rv~~~l~~a~~~ 51 (87)
.|+....++..-+..+.-|.....+..|. ++ |+..++++...++..+..+
T Consensus 38 d~~~~~~~l~~Fl~~~~GGp~~Y~g~~m~~~H~~~~~~~~I~~~~fd~wl~~~~~al~e 96 (123)
T 2ksc_A 38 DMAKQKQHQKDFMTYAFGGTDRFPGRSMRAAHQDLVENAGLTDVHFDAIAENLVLTLQE 96 (123)
T ss_dssp CHHHHHHHHHHHHHHHTTCTTSCCSTHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHhhcccCCcCHHHHHHHHHHHHHHHHH
Confidence 47777888888887774333222233343 24 9999999999999888764
No 59
>1oeg_A Apolipoprotein E; sialic acid, heparin-binding, repeat, signal, disease mutation, polymorphism; NMR {Homo sapiens} SCOP: j.39.1.1
Probab=43.42 E-value=13 Score=15.45 Aligned_cols=15 Identities=13% Similarity=0.193 Sum_probs=10.8
Q ss_pred ChhHHHHHHHHhhcc
Q psy5845 2 HWTSAAVFTKDLDKT 16 (87)
Q Consensus 2 ~~~~~~~~l~~~~~~ 16 (87)
||..+.+++++++..
T Consensus 9 Q~~~lveKvq~a~~~ 23 (26)
T 1oeg_A 9 QWAGLVEKVQAAVGT 23 (26)
T ss_dssp HHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHcc
Confidence 577777887777654
No 60
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=38.27 E-value=53 Score=18.36 Aligned_cols=31 Identities=16% Similarity=0.139 Sum_probs=25.0
Q ss_pred CccccCCHHHHHHHHHHHHHHHHCCCeEEeCC
Q psy5845 28 IWGRKIDKEQMDKILEFIESGKSQGAQLVAGG 59 (87)
Q Consensus 28 ~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg 59 (87)
.--|+.++.-.+++.++|..|...| +++.|-
T Consensus 6 ~a~p~a~~~l~~kil~~L~lA~kag-klv~G~ 36 (122)
T 3o85_A 6 RAIPFANEELSLELLNLVKHGASLQ-AIKRGA 36 (122)
T ss_dssp TSCSBCCHHHHHHHHHHHHHHHHTT-CEEESH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHhC-CEeEcH
Confidence 3458999999999999999998776 466663
No 61
>2xyk_A 2-ON-2 hemoglobin; oxygen storage-transport complex; HET: HEM; 2.10A {Agrobacterium tumefaciens}
Probab=38.12 E-value=35 Score=19.24 Aligned_cols=49 Identities=8% Similarity=-0.067 Sum_probs=32.9
Q ss_pred ChhHHHHHHHHhhccccccCCCCC-----CCCc-----cccCCHHHHHHHHHHHHHHHHC
Q psy5845 2 HWTSAAVFTKDLDKTNYVTQGLRA-----GTIW-----GRKIDKEQMDKILEFIESGKSQ 51 (87)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~g~~~~~-----~~~~-----gpli~~~~~~rv~~~l~~a~~~ 51 (87)
.|+...+++..-+..+. |.|... ...| +--|+..++++...++..+..+
T Consensus 45 d~~~~~~~l~~Fl~~~l-GGp~~Y~~~~g~p~m~~~H~~~~I~~~~fd~Wl~~~~~al~e 103 (133)
T 2xyk_A 45 DLSGSEAKFYDYLTGYL-GGPPVYVEKHGHPMLRRRHFVAPIGPAERDEWLLCFRRAMDE 103 (133)
T ss_dssp STHHHHHHHHHHHHHHT-TSCCHHHHHHCSCCHHHHHTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHc-CcCcccccCCCCcCHHHhhcCCCcCHHHHHHHHHHHHHHHHH
Confidence 47778888888887764 444321 1111 1128999999999999988754
No 62
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=35.52 E-value=43 Score=16.48 Aligned_cols=20 Identities=25% Similarity=0.489 Sum_probs=16.8
Q ss_pred CCHHHHHHHHHHHHHHHHCC
Q psy5845 33 IDKEQMDKILEFIESGKSQG 52 (87)
Q Consensus 33 i~~~~~~rv~~~l~~a~~~G 52 (87)
.++.|.+-|...+++|.++|
T Consensus 5 lt~eq~~aILkaLdeaIe~G 24 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEKG 24 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHHHHHHHcC
Confidence 36788899999999998876
No 63
>1z0j_B FYVE-finger-containing RAB5 effector protein RABE, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Homo sapiens} SCOP: a.2.19.1
Probab=35.37 E-value=44 Score=16.59 Aligned_cols=18 Identities=33% Similarity=0.482 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHCC
Q psy5845 35 KEQMDKILEFIESGKSQG 52 (87)
Q Consensus 35 ~~~~~rv~~~l~~a~~~G 52 (87)
..|...|.+||.+|+..|
T Consensus 15 ~EQi~~I~~yI~qAk~~~ 32 (59)
T 1z0j_B 15 LQQIDNIKAYIFDAKQCG 32 (59)
T ss_dssp HHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 357788999999998754
No 64
>1s69_A Cyanoglobin, hemoglobin, HB; on 2 helical fold, heme, iron, cyanoba oxygen binding, hexacoordinate, truncated, oxygen storage-T complex; HET: FLC HEM; 1.68A {Synechocystis SP} SCOP: a.1.1.1 PDB: 1s6a_A* 1mwb_A* 1rtx_A* 2hz1_A* 2hz3_A* 2hz2_A*
Probab=35.08 E-value=57 Score=17.79 Aligned_cols=50 Identities=10% Similarity=0.082 Sum_probs=33.4
Q ss_pred ChhHHHHHHHHhhccccccCCCCCCCCcc----cc-----CCHHHHHHHHHHHHHHHHC
Q psy5845 2 HWTSAAVFTKDLDKTNYVTQGLRAGTIWG----RK-----IDKEQMDKILEFIESGKSQ 51 (87)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~g~~~~~~~~~g----pl-----i~~~~~~rv~~~l~~a~~~ 51 (87)
.|+....++...+..+.-|.....+..|. ++ |+..+|+++..++..+.++
T Consensus 39 d~~~~~~~l~~fl~~~~ggp~~y~g~~m~~~H~~l~~~~~I~~~~f~~wl~~l~~al~e 97 (124)
T 1s69_A 39 DMAKQRAHQKAFLTYAFGGTDKYDGRYMREAHKELVENHGLNGEHFDAVAEDLLATLKE 97 (124)
T ss_dssp CHHHHHHHHHHHHHHHTTSSSCCSSCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHhCcccCCCcCHHHHHHHHHHHHHHHHH
Confidence 46777778887777764332222233444 13 8999999999998888754
No 65
>1yzm_A FYVE-finger-containing RAB5 effector protein rabenosyn-5; RAB GTPase, vesicular trafficking, protein transport; 1.50A {Homo sapiens} SCOP: a.2.19.1
Probab=32.97 E-value=45 Score=16.01 Aligned_cols=18 Identities=33% Similarity=0.588 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHCC
Q psy5845 35 KEQMDKILEFIESGKSQG 52 (87)
Q Consensus 35 ~~~~~rv~~~l~~a~~~G 52 (87)
..|..-|.+||.+|+..+
T Consensus 8 ~EQ~~~I~~~I~qAk~~~ 25 (51)
T 1yzm_A 8 LQQIHNITSFIRQAKAAG 25 (51)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 357788999999998754
No 66
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=31.96 E-value=56 Score=20.19 Aligned_cols=26 Identities=31% Similarity=0.344 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEeCCc
Q psy5845 35 KEQMDKILEFIESGKSQGAQLVAGGG 60 (87)
Q Consensus 35 ~~~~~rv~~~l~~a~~~Ga~i~~gg~ 60 (87)
+..++++.+++++|.+.|+.+++=.+
T Consensus 17 ~~N~~~~~~~i~~A~~~gadlvvfPE 42 (262)
T 3ivz_A 17 DKNYSKAEKLIKEASKQGAQLVVLPE 42 (262)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECCT
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEeCC
Confidence 56789999999999999999887544
No 67
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=31.92 E-value=93 Score=19.86 Aligned_cols=32 Identities=19% Similarity=0.428 Sum_probs=23.2
Q ss_pred cccCCHHHHHHHHHHHHHH--------HHCCCeEEeCCcc
Q psy5845 30 GRKIDKEQMDKILEFIESG--------KSQGAQLVAGGGR 61 (87)
Q Consensus 30 gpli~~~~~~rv~~~l~~a--------~~~Ga~i~~gg~~ 61 (87)
|...+..+.+.++.+|... .+..-+|++||..
T Consensus 178 G~~At~e~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV 217 (254)
T 3m9y_A 178 GKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSV 217 (254)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSEEEECSCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCc
Confidence 5677899999877777653 3446799999864
No 68
>3omy_A Protein TRAM; DNA binding protein, dimer, bacterial conjugation, ribbon-HE helix, transcriptional repressor, DNA; 1.30A {Escherichia coli} SCOP: a.55.1.0
Probab=31.84 E-value=48 Score=15.99 Aligned_cols=24 Identities=13% Similarity=0.344 Sum_probs=20.3
Q ss_pred cccCCHHHHHHHHHHHHHHHHCCC
Q psy5845 30 GRKIDKEQMDKILEFIESGKSQGA 53 (87)
Q Consensus 30 gpli~~~~~~rv~~~l~~a~~~Ga 53 (87)
.--++..-+++|..++++-+.+||
T Consensus 5 q~Y~s~~v~~~I~~iVe~r~qeGA 28 (52)
T 3omy_A 5 QTYVNNNVYEQITDLVTIRKQEGI 28 (52)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHTTC
T ss_pred eeeechHHHHHHHHHHHHHHHcCc
Confidence 345688889999999999999998
No 69
>2bmm_A Thermostable hemoglobin from thermobifida fusca; bacterial hemoglobin, thermostable protein, oxygen storage/transport; HET: HEM; 2.48A {Thermobifida fusca}
Probab=31.52 E-value=31 Score=18.89 Aligned_cols=48 Identities=10% Similarity=0.044 Sum_probs=29.1
Q ss_pred hhHHHHHHHHhhccccccCCCCCCC-----C-----ccccCCHHHHHHHHHHHHHHHHC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGT-----I-----WGRKIDKEQMDKILEFIESGKSQ 51 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~-----~-----~gpli~~~~~~rv~~~l~~a~~~ 51 (87)
|+....++..-+..+. |.|..... . .+-=|+..++++...++..+..+
T Consensus 39 ~~~~~~~l~~fl~~~~-gGp~~Y~~~~g~p~l~~~H~~~~I~~~~f~~wl~~~~~al~e 96 (123)
T 2bmm_A 39 LGPAEERLRLFLMQYW-GGPRTYSERRGHPRLRMRHFPYRIGAEERDRWLTHMRAAVDD 96 (123)
T ss_dssp CHHHHHHHHHHHHHHH-TSCCHHHHHSCCCCHHHHTTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCCcccCCCCCChhHHHccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 5666677777666653 33321110 1 11128899999999988887754
No 70
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=31.31 E-value=43 Score=21.15 Aligned_cols=32 Identities=19% Similarity=0.219 Sum_probs=24.8
Q ss_pred cccCCHHHHHHHHHHHHHHHHCCCeEEeCCcc
Q psy5845 30 GRKIDKEQMDKILEFIESGKSQGAQLVAGGGR 61 (87)
Q Consensus 30 gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~~ 61 (87)
|...+..+.+.+..+|.......-+|++||..
T Consensus 166 G~~At~e~a~ev~~~IR~~l~~~vrIlYGGSV 197 (233)
T 2jgq_A 166 KKSASLEDIYLTHGFLKQILNQKTPLLYGGSV 197 (233)
T ss_dssp --CCCHHHHHHHHHHHHHHSCTTSCEEEESSC
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCcEEEcCCc
Confidence 66789999999999998766446789999864
No 71
>1dp3_A TRAM protein; helix-loop-helix, DNA binding protein; NMR {Escherichia coli} SCOP: a.55.1.2
Probab=30.59 E-value=28 Score=17.03 Aligned_cols=23 Identities=26% Similarity=0.442 Sum_probs=18.7
Q ss_pred cCCHHHHHHHHHHHHHHHHCCCe
Q psy5845 32 KIDKEQMDKILEFIESGKSQGAQ 54 (87)
Q Consensus 32 li~~~~~~rv~~~l~~a~~~Ga~ 54 (87)
-++..-+++|..+++.-+++||+
T Consensus 6 Yvs~~v~~~I~~ive~r~qeGA~ 28 (55)
T 1dp3_A 6 YVSDEIVYKINKIVERRRAEGAK 28 (55)
T ss_dssp CCCCTHHHHHHHHHHHHHHHTCC
T ss_pred ehhhHHHHHHHHHHHHHHHcCCC
Confidence 35667789999999988888885
No 72
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=29.92 E-value=81 Score=17.96 Aligned_cols=31 Identities=19% Similarity=0.171 Sum_probs=24.3
Q ss_pred CccccCCHHHHHHHHHHHHHHHHCCCeEEeCC
Q psy5845 28 IWGRKIDKEQMDKILEFIESGKSQGAQLVAGG 59 (87)
Q Consensus 28 ~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg 59 (87)
.--||.+..-.+++.++|+.|...| ++..|-
T Consensus 7 ~a~p~a~~~~~~ki~~~L~lA~k~g-kl~~G~ 37 (134)
T 2ale_A 7 KAFPLADAALTQQILDVVQQAANLR-QLKKGA 37 (134)
T ss_dssp TCCSBCCHHHHHHHHHHHHHHHHTT-CEEESH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHcC-CcccCc
Confidence 3458999999999999999998765 466664
No 73
>1z0k_B FYVE-finger-containing RAB5 effector protein rabenosyn-5; RAB gtpases, effector complex, vesicular trafficking, protein transport; HET: GTP MES; 1.92A {Homo sapiens} SCOP: a.2.19.1
Probab=29.43 E-value=60 Score=16.60 Aligned_cols=18 Identities=33% Similarity=0.588 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHCC
Q psy5845 35 KEQMDKILEFIESGKSQG 52 (87)
Q Consensus 35 ~~~~~rv~~~l~~a~~~G 52 (87)
..|...|++||++|++.+
T Consensus 26 ~EQ~~~I~~yI~qAk~~~ 43 (69)
T 1z0k_B 26 LQQIHNITSFIRQAKAAG 43 (69)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 467788999999998754
No 74
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=29.03 E-value=59 Score=23.05 Aligned_cols=26 Identities=15% Similarity=0.286 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEeCCc
Q psy5845 35 KEQMDKILEFIESGKSQGAQLVAGGG 60 (87)
Q Consensus 35 ~~~~~rv~~~l~~a~~~Ga~i~~gg~ 60 (87)
+..++++.+++++|.++||.+++-.+
T Consensus 22 ~~N~~~i~~~i~~Aa~~GAdLvvfPE 47 (565)
T 4f4h_A 22 AGNVAKIVAAAQAAHDAGAHFLIAPE 47 (565)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECCT
T ss_pred HHHHHHHHHHHHHHHHCCCcEEECCC
Confidence 56679999999999999999987554
No 75
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=28.61 E-value=68 Score=20.18 Aligned_cols=26 Identities=27% Similarity=0.305 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEeCCc
Q psy5845 35 KEQMDKILEFIESGKSQGAQLVAGGG 60 (87)
Q Consensus 35 ~~~~~rv~~~l~~a~~~Ga~i~~gg~ 60 (87)
+..++++.++++.|.+.|+.+++=.+
T Consensus 36 ~~N~~~~~~~i~~A~~~gadlvvfPE 61 (283)
T 3hkx_A 36 QHNLDLIDDAAARASEQGAQLLLTPE 61 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECCT
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEcCC
Confidence 56779999999999989998886443
No 76
>2gu0_A Nonstructural protein 2; NSP2, HIT motif, bristol, viral protein; 2.80A {Human rotavirus C}
Probab=27.97 E-value=80 Score=20.62 Aligned_cols=43 Identities=12% Similarity=0.023 Sum_probs=31.9
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHHH
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEFI 45 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~l 45 (87)
++.++..+.+.+..++++.......-++.++|-+|++.+.-.+
T Consensus 76 f~kva~ll~e~LN~~k~~~~~~~~~il~~vvsVRHLEnL~~R~ 118 (312)
T 2gu0_A 76 YTELVNLLADTLNMVSMPTEKFQFDIVKTVVQVRHLENLLCRI 118 (312)
T ss_dssp HHHHHHHHHHHHHHHTCBGGGCCGGGGGCBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcceeccHHHHHHHHHhheeeHHhHHhHHhhh
Confidence 4678889999999888775322234589999999998875444
No 77
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=27.81 E-value=1.1e+02 Score=19.72 Aligned_cols=32 Identities=22% Similarity=0.409 Sum_probs=25.4
Q ss_pred cccCCHHHHHHHHHHHHHHHH----CCCeEEeCCcc
Q psy5845 30 GRKIDKEQMDKILEFIESGKS----QGAQLVAGGGR 61 (87)
Q Consensus 30 gpli~~~~~~rv~~~l~~a~~----~Ga~i~~gg~~ 61 (87)
|...+..+.+.+..+|..... ..-+|++||..
T Consensus 200 G~tAt~e~aqevh~~IR~~l~~~~a~~~rIlYGGSV 235 (272)
T 4g1k_A 200 GKSATAEQAQQVHAFLRGRLAAKGAGHVSLLYGGSV 235 (272)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHTCTTSCEEECSCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCceEEEcCCc
Confidence 667799999999888887653 45789999964
No 78
>2ig3_A Group III truncated haemoglobin; truncated hemoglobin, 2-ON-2 globin, oxygen storage-transpor; HET: HEM; 2.15A {Campylobacter jejuni}
Probab=27.42 E-value=62 Score=18.14 Aligned_cols=49 Identities=12% Similarity=0.136 Sum_probs=32.6
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCc----ccc-CCHHHHHHHHHHHHHHHHC
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIW----GRK-IDKEQMDKILEFIESGKSQ 51 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~----gpl-i~~~~~~rv~~~l~~a~~~ 51 (87)
|+...+++..-...+..|.....+..+ +-- |+..++++...++..+..+
T Consensus 43 ~~~~~~~l~~F~~~~lgGp~~Y~G~pm~~H~~l~~I~~~~fd~Wl~~~~~al~e 96 (127)
T 2ig3_A 43 WKEHKAKIGNFWAGMLLGEGDYNGQPLKKHLDLPPFPQEFFEIWLKLFEESLNI 96 (127)
T ss_dssp HHHHHHHHHHHHHHHHTSCSCCCSCHHHHHHSSCCCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 777788888877776444322222222 112 8999999999999888754
No 79
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=25.64 E-value=56 Score=20.33 Aligned_cols=23 Identities=26% Similarity=0.367 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHCCCeEEeCCcc
Q psy5845 39 DKILEFIESGKSQGAQLVAGGGR 61 (87)
Q Consensus 39 ~rv~~~l~~a~~~Ga~i~~gg~~ 61 (87)
+.+...+++++++|.+++.||..
T Consensus 141 ee~~~~i~~l~~~G~~vVVG~~~ 163 (225)
T 2pju_A 141 EDARGQINELKANGTEAVVGAGL 163 (225)
T ss_dssp HHHHHHHHHHHHTTCCEEEESHH
T ss_pred HHHHHHHHHHHHCCCCEEECCHH
Confidence 45567788888999999999853
No 80
>2qrw_A Hemoglobin-like protein HBO; truncated hemoglobin fold, alpha helix, heme, hydroxylation, iron, membrane, metal-binding; HET: HEM; 1.93A {Mycobacterium tuberculosis} PDB: 1ngk_A*
Probab=25.62 E-value=46 Score=18.36 Aligned_cols=49 Identities=8% Similarity=-0.008 Sum_probs=31.4
Q ss_pred ChhHHHHHHHHhhccccccCCCCCC-----CCc-----cccCCHHHHHHHHHHHHHHHHC
Q psy5845 2 HWTSAAVFTKDLDKTNYVTQGLRAG-----TIW-----GRKIDKEQMDKILEFIESGKSQ 51 (87)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~g~~~~~~-----~~~-----gpli~~~~~~rv~~~l~~a~~~ 51 (87)
.|+....++..-+..+. |.|.... +.| +-=|+..++++...++..+.+.
T Consensus 40 d~~~~~~~l~~fl~~~~-GGp~~Y~~~~G~p~m~~~H~~~~I~~~~f~~wl~~~~~al~~ 98 (128)
T 2qrw_A 40 DLAGAEERLRMFLEQYW-GGPRTYSEQRGHPRLRMRHAPFRISLIERDAFLRCMHTAVAS 98 (128)
T ss_dssp CCHHHHHHHHHHHHHHT-TSCCHHHHHHCSCCHHHHHTTSCCCHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHh-CCCcccccCcCChhHHHhhcCCCcCHHHHHHHHHHHHHHHhH
Confidence 36667777777776653 4333211 111 1128999999999999998843
No 81
>3v1a_A Computational design, MID1-APO1; helix-turn-helix, metal binding, homodimer, de novo protein, binding protein; 0.98A {Artificial gene} PDB: 3v1b_A* 3v1c_A* 3v1d_A* 3v1f_A* 3v1e_A
Probab=25.24 E-value=64 Score=15.27 Aligned_cols=17 Identities=29% Similarity=0.516 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHC
Q psy5845 35 KEQMDKILEFIESGKSQ 51 (87)
Q Consensus 35 ~~~~~rv~~~l~~a~~~ 51 (87)
..|..-|.++|+.|++.
T Consensus 7 ~EQ~~~I~~~I~qAk~~ 23 (48)
T 3v1a_A 7 AQQIKNIHSFIHQAKAA 23 (48)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 35677889999998754
No 82
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=25.10 E-value=85 Score=19.67 Aligned_cols=26 Identities=15% Similarity=0.358 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEeCCc
Q psy5845 35 KEQMDKILEFIESGKSQGAQLVAGGG 60 (87)
Q Consensus 35 ~~~~~rv~~~l~~a~~~Ga~i~~gg~ 60 (87)
+..++++.++++.|.+.|+.+++=.+
T Consensus 21 ~~n~~~~~~~i~~a~~~gadlvv~PE 46 (303)
T 1uf5_A 21 EQVVVRLLDMLTKAASRGANFIVFPE 46 (303)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECCT
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEecc
Confidence 56778999999999888998876443
No 83
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=24.96 E-value=40 Score=20.31 Aligned_cols=23 Identities=26% Similarity=0.450 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHCCCeEEeCCcc
Q psy5845 39 DKILEFIESGKSQGAQLVAGGGR 61 (87)
Q Consensus 39 ~rv~~~l~~a~~~Ga~i~~gg~~ 61 (87)
+.+...+++++++|.+++.||..
T Consensus 129 ~e~~~~i~~l~~~G~~vvVG~~~ 151 (196)
T 2q5c_A 129 DEITTLISKVKTENIKIVVSGKT 151 (196)
T ss_dssp GGHHHHHHHHHHTTCCEEEECHH
T ss_pred HHHHHHHHHHHHCCCeEEECCHH
Confidence 34566788888999999999853
No 84
>1vr4_A Hypothetical protein APC22750; structural genomics, pentamer, PSI, PR structure initiative, the midwest center for structural GEN MCSG; 2.09A {Bacillus cereus} SCOP: d.230.5.1 PDB: 2gtc_A
Probab=24.29 E-value=95 Score=16.89 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=27.9
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHCCCeEEeCCc
Q psy5845 27 TIWGRKIDKEQMDKILEFIESGKSQGAQLVAGGG 60 (87)
Q Consensus 27 ~~~gpli~~~~~~rv~~~l~~a~~~Ga~i~~gg~ 60 (87)
..+..+..+..-+-+.++.++|.+.||.-+.|=.
T Consensus 48 ~~y~~~l~~aR~~A~~rm~~~A~~lGAnAVVgvr 81 (103)
T 1vr4_A 48 GSYESKLKEARDIAMDEMKELAKQKGANAIVGVD 81 (103)
T ss_dssp TSSSCTTHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEE
Confidence 4577788888888888999999999998887644
No 85
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=23.87 E-value=94 Score=19.26 Aligned_cols=25 Identities=16% Similarity=0.355 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEeCC
Q psy5845 35 KEQMDKILEFIESGKSQGAQLVAGG 59 (87)
Q Consensus 35 ~~~~~rv~~~l~~a~~~Ga~i~~gg 59 (87)
+..++++..+++.|.+.|+.+++=.
T Consensus 18 ~~n~~~~~~~i~~a~~~gadlvv~P 42 (276)
T 2w1v_A 18 SDNLTRACSLVREAAKQGANIVSLP 42 (276)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECC
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEcC
Confidence 5678999999999988899887643
No 86
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=23.82 E-value=62 Score=20.33 Aligned_cols=26 Identities=12% Similarity=0.164 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEeCCc
Q psy5845 35 KEQMDKILEFIESGKSQGAQLVAGGG 60 (87)
Q Consensus 35 ~~~~~rv~~~l~~a~~~Ga~i~~gg~ 60 (87)
+..++++.+++++|.+.|+.+++=.+
T Consensus 36 ~~Nl~~~~~~i~~A~~~gadlvvfPE 61 (281)
T 3p8k_A 36 SKNETQITQWFEKNMNAEVDVVVLPE 61 (281)
T ss_dssp HHHHHHHHHHHHHHCCTTCCEEECCS
T ss_pred HHHHHHHHHHHHHHHhCCCcEEEcCC
Confidence 56779999999999888998886443
No 87
>4g0a_A Non-structural protein 2; RNA triphosphatase, RNA binding, hydrolase activity, nucleot binding, metal ION binding, HOST cell cytoplasm; 2.10A {Simian 11 rotavirus} PDB: 1l9v_A 2r7c_A* 2r7j_A 2r7p_A* 2r8f_A* 4g0j_A
Probab=22.91 E-value=36 Score=22.28 Aligned_cols=41 Identities=15% Similarity=0.202 Sum_probs=31.0
Q ss_pred hhHHHHHHHHhhccccccCCCCCCCCccccCCHHHHHHHHHH
Q psy5845 3 WTSAAVFTKDLDKTNYVTQGLRAGTIWGRKIDKEQMDKILEF 44 (87)
Q Consensus 3 ~~~~~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~ 44 (87)
++.||..+.+.+..++++... -..-++.++|-+|++.+.-.
T Consensus 77 f~kVA~ll~e~LN~vkvtq~~-~~~il~~vvsVRHLEnL~~R 117 (317)
T 4g0a_A 77 FTKVAMLICEALNSLKVTQAN-VSNVLSRVVSIRHLENLVIR 117 (317)
T ss_dssp HHHHHHHHHHHHHTTTCCTTT-HHHHHHCBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhceehHHH-HHHHHhHeeeHHHHHhHHhh
Confidence 467899999999999987532 12247899999999876433
No 88
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=22.58 E-value=1.4e+02 Score=18.97 Aligned_cols=32 Identities=16% Similarity=0.351 Sum_probs=24.5
Q ss_pred cccCCHHHHHHHHHHHHHHH--------HCCCeEEeCCcc
Q psy5845 30 GRKIDKEQMDKILEFIESGK--------SQGAQLVAGGGR 61 (87)
Q Consensus 30 gpli~~~~~~rv~~~l~~a~--------~~Ga~i~~gg~~ 61 (87)
|...+..+.+.++.+|.... +..-+|++||..
T Consensus 174 G~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV 213 (250)
T 1yya_A 174 GKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSV 213 (250)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCC
Confidence 66778999988888887643 346799999864
No 89
>2a7o_A Huntingtin interacting protein B; SRI domain, SRI, HSRI, SET2, HSET2, phosphoctd associating protein, SET2 RPB1-interacting domain, PCID, PCAP; NMR {Homo sapiens}
Probab=22.50 E-value=1.1e+02 Score=17.11 Aligned_cols=23 Identities=13% Similarity=0.222 Sum_probs=17.7
Q ss_pred CCCCCccccCCHHHHHHHHHHHH
Q psy5845 24 RAGTIWGRKIDKEQMDKILEFIE 46 (87)
Q Consensus 24 ~~~~~~gpli~~~~~~rv~~~l~ 46 (87)
.+++.+|.+.|...|..+..-+.
T Consensus 39 k~~Ck~GRITs~EDFK~LaRKLT 61 (112)
T 2a7o_A 39 KPDCKVGRITTTEDFKHLARKLT 61 (112)
T ss_dssp STTCSSSBCCCHHHHHHHHHHHH
T ss_pred cCccccCccccHHHHHHHHHHHH
Confidence 45688999999999977655443
No 90
>2ikf_A RNA uridylyl transferase; tutase, nucleotidyltransferase, UTP-binding, RNA editing; HET: UTP; 2.00A {Trypanosoma brucei} PDB: 2nom_A* 2q0c_A* 2q0d_A* 2q0e_A* 2q0f_A* 2q0g_A*
Probab=22.43 E-value=1.2e+02 Score=19.84 Aligned_cols=35 Identities=11% Similarity=0.147 Sum_probs=29.6
Q ss_pred cccccCCCCCCCCccccCCHHHHHHHHHHHHHHHH
Q psy5845 16 TNYVTQGLRAGTIWGRKIDKEQMDKILEFIESGKS 50 (87)
Q Consensus 16 ~~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~~ 50 (87)
.+.+-||.+.+.+.|.-++...+.+++..++.|.+
T Consensus 312 ~l~IeDP~~~~~N~~r~v~~~~~~~i~~~f~~A~~ 346 (353)
T 2ikf_A 312 QWCIEDPYELNLNVGRNVTPLKRDFLRRHLEKARD 346 (353)
T ss_dssp SSEEBCSSSTTCBTTTTCCHHHHHHHHHHHHHHHT
T ss_pred eEEEECCCCCCCcccCCCCHHHHHHHHHHHHHHHH
Confidence 45677899988899999999999999998887754
No 91
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=22.06 E-value=1.1e+02 Score=19.62 Aligned_cols=32 Identities=19% Similarity=0.303 Sum_probs=24.8
Q ss_pred cccCCHHHHHHHHHHHHHHHH-------CCCeEEeCCcc
Q psy5845 30 GRKIDKEQMDKILEFIESGKS-------QGAQLVAGGGR 61 (87)
Q Consensus 30 gpli~~~~~~rv~~~l~~a~~-------~Ga~i~~gg~~ 61 (87)
|...+..+.+.++.+|..... ..-+|++||..
T Consensus 177 G~~Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV 215 (256)
T 1aw2_A 177 GKAATAEDAQRIHAQIRAHIAEKSEAVAKNVVIQYGGSV 215 (256)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHTTCHHHHHHCEEEECSCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCC
Confidence 677899999999998887542 34689999864
No 92
>3oz7_A Phosphoglycerate kinase; transferase, ATP binding, glycolysi malaria parasite; 2.70A {Plasmodium falciparum} SCOP: c.86.1.1 PDB: 1ltk_A* 3oza_A
Probab=22.05 E-value=1.5e+02 Score=20.43 Aligned_cols=28 Identities=18% Similarity=0.200 Sum_probs=22.3
Q ss_pred cCCHHHHHHHHHHHHHHHHCCCeEEeCC
Q psy5845 32 KIDKEQMDKILEFIESGKSQGAQLVAGG 59 (87)
Q Consensus 32 li~~~~~~rv~~~l~~a~~~Ga~i~~gg 59 (87)
++.+...+..+.+++.|++.|.+|++.-
T Consensus 258 l~e~d~~~~a~~il~~a~~~g~~i~LPv 285 (417)
T 3oz7_A 258 LFDEAGSKIVGEIMEKAKAKNVQIFLPV 285 (417)
T ss_dssp CCCTTTHHHHHHHHHHHHHTTCEEECCS
T ss_pred hcCccChHHHHHHHHHHHHcCCEEECCc
Confidence 4555567888999999999999998754
No 93
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=22.04 E-value=1.7e+02 Score=18.87 Aligned_cols=32 Identities=16% Similarity=0.289 Sum_probs=23.9
Q ss_pred cccCCHHHHHHHHHHHHHHH--------HCCCeEEeCCcc
Q psy5845 30 GRKIDKEQMDKILEFIESGK--------SQGAQLVAGGGR 61 (87)
Q Consensus 30 gpli~~~~~~rv~~~l~~a~--------~~Ga~i~~gg~~ 61 (87)
|...+..+.+.+..+|.... +..-+|++||..
T Consensus 180 G~tAtpe~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV 219 (267)
T 3ta6_A 180 GRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSV 219 (267)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSCEEECSCC
T ss_pred CcCCCHHHHHHHHHHHHHHHHHhhChhhhccceEEEcCCc
Confidence 66778999888887776543 345789999964
No 94
>4fh3_A Poly(A) RNA polymerase protein CID1; nucleotidyltransferase, poly(U) polymerase, transferase; 2.00A {Schizosaccharomyces pombe} PDB: 4fh5_A* 4fhp_A* 4fhv_A* 4fhw_A* 4fhy_A* 4fhx_A* 4ep7_A*
Probab=21.96 E-value=1.5e+02 Score=19.15 Aligned_cols=33 Identities=9% Similarity=0.085 Sum_probs=27.4
Q ss_pred ccccCCCCCCCCccccCCHHHHHHHHHHHHHHH
Q psy5845 17 NYVTQGLRAGTIWGRKIDKEQMDKILEFIESGK 49 (87)
Q Consensus 17 ~~~g~~~~~~~~~gpli~~~~~~rv~~~l~~a~ 49 (87)
+.+-||.+.+-+.|.-++...+.+++.....|.
T Consensus 298 l~IeDPf~~~~Nvar~Vs~~~~~~I~~eF~~A~ 330 (349)
T 4fh3_A 298 LAIEDPFEISHNVGRTVSSSGLYRIRGEFMAAS 330 (349)
T ss_dssp SCBBCSSSTTCBGGGGCCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCcCCCCCCHHHHHHHHHHHHHHH
Confidence 557789888888999999999999988777654
No 95
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=21.54 E-value=1.2e+02 Score=19.38 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=23.9
Q ss_pred cccCCHHHHHHHHHHHHHHH--------HCCCeEEeCCcc
Q psy5845 30 GRKIDKEQMDKILEFIESGK--------SQGAQLVAGGGR 61 (87)
Q Consensus 30 gpli~~~~~~rv~~~l~~a~--------~~Ga~i~~gg~~ 61 (87)
|...+..+.+.++.+|.... +..-+|++||..
T Consensus 178 G~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV 217 (257)
T 2yc6_A 178 GVVATPEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSA 217 (257)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESSC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCcc
Confidence 66778888888888777642 346799999864
No 96
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=21.30 E-value=1.6e+02 Score=18.79 Aligned_cols=32 Identities=19% Similarity=0.315 Sum_probs=24.4
Q ss_pred cccCCHHHHHHHHHHHHHHH--------HCCCeEEeCCcc
Q psy5845 30 GRKIDKEQMDKILEFIESGK--------SQGAQLVAGGGR 61 (87)
Q Consensus 30 gpli~~~~~~rv~~~l~~a~--------~~Ga~i~~gg~~ 61 (87)
|...+..+.+.++.+|.... +..-+|++||..
T Consensus 174 G~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV 213 (252)
T 2btm_A 174 GKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSV 213 (252)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTSEEEEESSC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCC
Confidence 67788999888888887642 346799999864
No 97
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=20.66 E-value=1.5e+02 Score=19.15 Aligned_cols=32 Identities=19% Similarity=0.362 Sum_probs=21.4
Q ss_pred cccCCHHHHHHHHHHHHHHH-------HCCCeEEeCCcc
Q psy5845 30 GRKIDKEQMDKILEFIESGK-------SQGAQLVAGGGR 61 (87)
Q Consensus 30 gpli~~~~~~rv~~~l~~a~-------~~Ga~i~~gg~~ 61 (87)
|...+..+.+.+..+|.... +..-+|++||..
T Consensus 198 GktAt~e~aqevh~~IR~~l~~~~~~~a~~~rIlYGGSV 236 (275)
T 3kxq_A 198 GNTATSADVAEVHAFIHHKMHSRFGDEGAKIRLLYGGSV 236 (275)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEECSCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhhhhhcccceEEEcCCc
Confidence 66778899888888776543 346799999964
No 98
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=20.64 E-value=1.2e+02 Score=19.40 Aligned_cols=32 Identities=19% Similarity=0.335 Sum_probs=24.0
Q ss_pred cccCCHHHHHHHHHHHHHHH-------HCCCeEEeCCcc
Q psy5845 30 GRKIDKEQMDKILEFIESGK-------SQGAQLVAGGGR 61 (87)
Q Consensus 30 gpli~~~~~~rv~~~l~~a~-------~~Ga~i~~gg~~ 61 (87)
|...+..+.+.++.+|.... +..-+|++||..
T Consensus 175 G~~Atpe~a~evh~~IR~~l~~~~~~~a~~vrIlYGGSV 213 (255)
T 1tre_A 175 GKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSV 213 (255)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECSCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCC
Confidence 66788999988888887643 235789999864
Done!