RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy5847
(170 letters)
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 201 bits (514), Expect = 7e-64
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 8/170 (4%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQADKYTI 60
+ E+ +V+G ++ + L L++V+KE+LRLYP A R + E D +
Sbjct: 280 LQAEVDEVIGSKRY--LDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRV 337
Query: 61 PIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYG 120
P + Y + R ++ +P F PDRF P + Y PFS G R+C+G ++
Sbjct: 338 PGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGA--PKPRFTYFPFSLGHRSCIGQQFA 395
Query: 121 MLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFEFGVTLRLLAGNDIRLESR 170
+++K ++ LL+R + + TL+ L L R
Sbjct: 396 QMEVKVVMAKLLQRLEFRLVPG----QRFGLQEQATLKPLDPVLCTLRPR 441
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 196 bits (501), Expect = 2e-61
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQADKYTI 60
+ EI V+G+ D IQ+L ++ I E++R P ++ R + D Y +
Sbjct: 332 IIKEIQTVIGERD---IKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPV 388
Query: 61 PIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYG 120
G + I ++HR + P+ F + F + PF GPR C G
Sbjct: 389 KKGTNIILNIGRMHR-LEFFPKPNEFTLENFAK----NVPYRYFQPFGFGPRGCAGKYIA 443
Query: 121 MLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFEFGVTLRLLAGND---IRLESR 170
M+ MK L TLLRR+ V + + VE ++ ++L + + R
Sbjct: 444 MVMMKAILVTLLRRFHVKT-LQGQCVESIQKIHDLSLHPDETKNMLEMIFTPR 495
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 186 bits (475), Expect = 6e-58
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 7/158 (4%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQADKYTI 60
+ DE+ V G P ++ +++L VI E +RL PA ++ R E + Y I
Sbjct: 300 IRDEVEAVTGGRP---VAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRI 356
Query: 61 PIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYG 120
P GA + Y I RDP+ + + F PDR+LP + A PFS+G R C +
Sbjct: 357 PAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCPSDHFS 416
Query: 121 MLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFEFGVTLR 158
M Q+ + L +YR + G+TLR
Sbjct: 417 MAQLTLITAALATKYRFEQVAG----SNDAVRVGITLR 450
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 184 bits (470), Expect = 3e-57
Identities = 54/170 (31%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQADKYTI 60
Y E V G++ + TYDQ+++L+LL R IKETLRL P I+ R YTI
Sbjct: 289 CYLEQKTVCGENLPPL-TYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTI 347
Query: 61 PIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYG 120
P G V R W F PDR+L + AY+PF +G C+G +
Sbjct: 348 PPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFGAGRHRCIGENFA 407
Query: 121 MLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFEFGVTLRLLAGNDIRLESR 170
+Q+KT ST+LR Y D + + IR + R
Sbjct: 408 YVQIKTIWSTMLRLYEFDLIDG----YFPTVNYTTMIHTPENPVIRYKRR 453
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 177 bits (452), Expect = 1e-54
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 5/171 (2%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQADKYTI 60
V DE+ ++ GD ++ ++++ L V+KETLRL+P I+ R E + + I
Sbjct: 282 VIDELDELYGDGRS--VSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRI 339
Query: 61 PIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEI-SRRNPNAYLPFSSGPRNCVGSKY 119
G VAA +R P + +PH F P R+ N ++PF +G CVG+ +
Sbjct: 340 HEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAF 399
Query: 120 GMLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFEFGVTLRLLAGNDIRLESR 170
++Q+K S LLR Y S + + ++L +R R
Sbjct: 400 AIMQIKAIFSVLLREYEFEMAQPPESYRNDH--SKMVVQLAQPAAVRYRRR 448
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 175 bits (445), Expect = 2e-53
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQ-ADKYT 59
+E +VL D P+Y Q+++L + V+ E LRL+P AP + + +Y
Sbjct: 290 AAEEAARVLVDPV---PSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYP 346
Query: 60 IPIGATVAAFIYQIHRDPRHW-SNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSK 118
+ G + I Q+HRD W + F+P+RF +A+ PF +G R C+G +
Sbjct: 347 LEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS--AIPQHAFKPFGNGQRACIGQQ 404
Query: 119 YGMLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFEFGVTLR 158
+ + + L +L+ + ++ + +TL+
Sbjct: 405 FALHEATLVLGMMLKHFDFEDHTN----YELDIKETLTLK 440
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 174 bits (442), Expect = 3e-53
Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 12/170 (7%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQADKYTI 60
+ EI + + + E+ R +E++R P ++ R + +++ Y +
Sbjct: 292 LRKEIEEFPAQLN----YNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVV 347
Query: 61 PIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYG 120
P G +A H D + P + P+R + A++ F +G C+G K+G
Sbjct: 348 PKGDIIACSPLLSHHDEEAFPEPRRWDPERDE------KVEGAFIGFGAGVHKCIGQKFG 401
Query: 121 MLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFEFGVTLRLLAGNDIRLESR 170
+LQ+KT L+T R Y V D + V + ++ R
Sbjct: 402 LLQVKTILATAFRSYDFQLLRD--EVPDPDYHTMVVGPTASQCRVKYIRR 449
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 172 bits (439), Expect = 2e-52
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 7/170 (4%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQADKYTI 60
+ E+ VL D+ P + ++ + L +KE++RL P+ P R + + +Y +
Sbjct: 320 LLQEVQSVLPDN--QTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYAL 377
Query: 61 PIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYG 120
P G + + ++ + H F+P+R+L E + NP A+LPF G R C+G +
Sbjct: 378 PKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKE-KKINPFAHLPFGIGKRMCIGRRLA 436
Query: 121 MLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFEFGVTLRLLAGNDIRLESR 170
LQ+ L ++++Y ++ D E V L I R
Sbjct: 437 ELQLHLALCWIIQKYDIVATDN----EPVEMLHLGILVPSRELPIAFRPR 482
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 170 bits (434), Expect = 1e-51
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 4/170 (2%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQADKYTI 60
+ +EI VL + PTYD + ++ L V+ ETLRL+P A + R ++++ + I
Sbjct: 309 LQEEIDAVLPNKAP--PTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFI 366
Query: 61 PIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYG 120
P G V Y +HRDP++W+ P F P+RF +P Y PF SGPRNC+G ++
Sbjct: 367 PKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFA 426
Query: 121 MLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFEFGVTLRLLAGNDIRLESR 170
++ MK L +L+ + P + + ++ G L+ +++ESR
Sbjct: 427 LMNMKLALIRVLQNFSFKPCKE--TQIPLKLSLGGLLQPEKPVVLKVESR 474
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 170 bits (432), Expect = 2e-51
Identities = 42/158 (26%), Positives = 70/158 (44%), Gaps = 7/158 (4%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQADKYTI 60
+ E++ +Q + LL IKETLRL+P + + R++ ++ Y I
Sbjct: 312 LRAEVLAARHQA--QGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMI 369
Query: 61 PIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYG 120
P V IY + R+P + +P F P R+L + + L F G R C+G +
Sbjct: 370 PAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKN-ITYFRNLGFGWGVRQCLGRRIA 428
Query: 121 MLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFEFGVTLR 158
L+M L +L +RV + + + DV F + L
Sbjct: 429 ELEMTIFLINMLENFRV----EIQHLSDVGTTFNLILM 462
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 167 bits (424), Expect = 3e-50
Identities = 27/153 (17%), Positives = 57/153 (37%), Gaps = 12/153 (7%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQ----AD 56
+ +EI V+ + + T I+++ L V+ E LR P +++
Sbjct: 321 LAEEIRSVIKSNGGEL-TMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDA 379
Query: 57 KYTIPIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPF-------SS 109
+ + G + + RDP+ + F P+RF+ E + + +
Sbjct: 380 AFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTV 439
Query: 110 GPRNCVGSKYGMLQMKTTLSTLLRRYRVLPGDK 142
G + C G + +L + + + RRY +
Sbjct: 440 GNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEV 472
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 165 bits (419), Expect = 1e-49
Identities = 35/178 (19%), Positives = 66/178 (37%), Gaps = 20/178 (11%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQAD---- 56
+ +EI + + T + I+++ L V+ E+LR+ P P +
Sbjct: 303 LAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDA 362
Query: 57 KYTIPIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGP----- 111
+ + G + + +DP+ + P + PDRF+ Y+ +S+GP
Sbjct: 363 TFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVG---DGEALLKYVWWSNGPETESP 419
Query: 112 ----RNCVGSKYGMLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFEFGVTLRLLAGNDI 165
+ C G + +L + + L RRY + + VTL L I
Sbjct: 420 TVENKQCAGKDFVVLITRLFVIELFRRYDSFEIEL----GESPLGAAVTLTFLKRASI 473
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 160 bits (406), Expect = 6e-48
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 12/172 (6%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQADKYTI 60
V E ++ T + ++++ L +V++E LRL P R + ++ Q +
Sbjct: 280 VRQEQNKLQLSQE---LTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHF 336
Query: 61 PIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLP-SEISRRNPNAYLPFSSGPRNCVGSKY 119
P G V+ I Q H DP + +P F P+RF P + P A++PF G R C+G ++
Sbjct: 337 PKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEF 396
Query: 120 GMLQMKTTLSTLLRRYR--VLPGDKCRSVEDVRFEFGVTLRLLAGNDIRLES 169
L+MK + L++++ +LPG +++ + R ++L S
Sbjct: 397 ARLEMKLFATRLIQQFDWTLLPG------QNLELVVTPSPRPKDNLRVKLHS 442
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 156 bits (397), Expect = 3e-46
Identities = 40/197 (20%), Positives = 76/197 (38%), Gaps = 32/197 (16%)
Query: 1 VYDEIVQVLGDDPETVP--------TYDQIQELHLLTRVIKETLRLYPAAPIIGRHITRE 52
+E+ + L + + V + ++ +L +L +IKE+LRL A+ I R
Sbjct: 294 ATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNI-----RT 348
Query: 53 IQAD--------KYTIPIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEIS------- 97
+ D Y I +A + +H DP + +P F+ DR+L
Sbjct: 349 AKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYC 408
Query: 98 --RRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRYRV-LPGDKCRSVE-DVRFEF 153
+ Y+PF SG C G + + ++K L +L + + L + + D
Sbjct: 409 NGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAG 468
Query: 154 GVTLRLLAGNDIRLESR 170
L L + + + +
Sbjct: 469 LGILPPLNDIEFKYKFK 485
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 149 bits (378), Expect = 1e-43
Identities = 37/196 (18%), Positives = 72/196 (36%), Gaps = 31/196 (15%)
Query: 1 VYDEIVQVLGDDPETVP-----TYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQA 55
V E+ +L + V + +L V+ E+LRL A ITRE+
Sbjct: 299 VRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAAP-----FITREVVV 353
Query: 56 D---------KYTIPIGATVAAF-IYQIHRDPRHWSNPHCFQPDRFLPSE---------I 96
D ++ + G + F RDP +++P F+ +RFL +
Sbjct: 354 DLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKD 413
Query: 97 SRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFE--FG 154
+R N +P+ +G +C+G Y + +K + +L + + + +
Sbjct: 414 GKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGF 473
Query: 155 VTLRLLAGNDIRLESR 170
++ +R R
Sbjct: 474 GLMQPEHDVPVRYRIR 489
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 143 bits (364), Expect = 3e-42
Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 10/148 (6%)
Query: 23 QELHLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHRDPRHWSN 82
+ +E LRLYP A I+ R + R + + +P G T+ Y R + +
Sbjct: 249 ESEEAALAAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLH--FPD 306
Query: 83 PHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRYRVLPGDK 142
F+P+RFL Y PF G R C+G + +L+ L RR+R+ P
Sbjct: 307 GEAFRPERFLEE--RGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDP--- 361
Query: 143 CRSVEDVRFEFGVTLRLLAGNDIRLESR 170
+ R VTLR G R
Sbjct: 362 ---LPFPRVLAQVTLRPEGGLPARPREE 386
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 136 bits (344), Expect = 4e-39
Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 9/137 (6%)
Query: 4 EIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIG 63
+ L +Q+ ++E R YP P + +++ + + P G
Sbjct: 252 FVAHALQTCSGI--RAALVQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEG 309
Query: 64 ATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGP----RNCVGSKY 119
V +Y + D W++P F+P+RF + ++P G C G
Sbjct: 310 RQVVLDLYGSNHDAATWADPQEFRPERFRA---WDEDSFNFIPQGGGDHYLGHRCPGEWI 366
Query: 120 GMLQMKTTLSTLLRRYR 136
+ MK L+ R
Sbjct: 367 VLAIMKVAAHLLVNAMR 383
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 132 bits (334), Expect = 3e-37
Identities = 42/191 (21%), Positives = 71/191 (37%), Gaps = 31/191 (16%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQAD---- 56
V +EI + + ++ + + V+ ETLRL AA I TR++ D
Sbjct: 290 VREEI-----QGGKHLRLEERQKNTPVFDSVLWETLRLTAAALI-----TRDVTQDKKIC 339
Query: 57 -----KYTIPIGATVAAF-IYQIHRDPRHWSNPHCFQPDRFLPSEIS---------RRNP 101
+Y + G + F DP+ P FQ DRFL ++ + R
Sbjct: 340 LSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVK 399
Query: 102 NAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRYRV-LPGDKCRSVEDVRFEFGV-TLRL 159
+P+ + C G + + +K + T+L R+ V L +G L+
Sbjct: 400 YPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQP 459
Query: 160 LAGNDIRLESR 170
+IR R
Sbjct: 460 AGDLEIRYRIR 470
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 129 bits (326), Expect = 2e-36
Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
Query: 21 QIQELHLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHRDPRHW 80
+ ++E R YP P +G + ++ + G +V +Y + DPR W
Sbjct: 269 RSGNSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLW 328
Query: 81 SNPHCFQPDRFLPSEISRRNPNAYLPFSSGP----RNCVGSKYGMLQMKTTLSTLLRRYR 136
+P F+P+RF N +P G C G + MK +L L+ +
Sbjct: 329 DHPDEFRPERFAE---REENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIE 385
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 100 bits (252), Expect = 1e-25
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITREIQADKYT 59
V EI ++G P P++D ++ V+ E LR P+ I + + Y+
Sbjct: 310 VQKEIDLIMG--PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYS 367
Query: 60 IPIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKY 119
IP G TV +Y +H D ++W +P F P+RFL S A +PFS G R+C+G
Sbjct: 368 IPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHL 427
Query: 120 GMLQMKTTLSTLLRRYR--VLPGDKCRSVEDVRFEFGVTLR 158
++M + LL+R+ D++ G+TL+
Sbjct: 428 ARMEMFLFFTALLQRFHLHFPHELV----PDLKPRLGMTLQ 464
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 100 bits (251), Expect = 1e-25
Identities = 48/162 (29%), Positives = 67/162 (41%), Gaps = 9/162 (5%)
Query: 1 VYDEIVQVLG-DDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITREIQADKY 58
+ +E+ + LG + TY L LL I E LRL P P+ + TR Y
Sbjct: 316 LQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGY 375
Query: 59 TIPIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSK 118
IP G V + H D W PH F+PDRFL + + L F G R C+G
Sbjct: 376 DIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPGAN----PSALAFGCGARVCLGES 431
Query: 119 YGMLQMKTTLSTLLRRYR--VLPGDKCRSVEDVRFEFGVTLR 158
L++ L+ LL+ + P S+ GV L+
Sbjct: 432 LARLELFVVLARLLQAFTLLPPPVGALPSL-QPDPYCGVNLK 472
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 100 bits (251), Expect = 2e-25
Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 4/159 (2%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITREIQADKYT 59
V EI V+G P + T VI E R P+ + +R+I+ +
Sbjct: 309 VQQEIDDVIG--QVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFR 366
Query: 60 IPIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKY 119
IP G T+ + + +D W P F P+ FL ++ P A+LPFS+G R C+G
Sbjct: 367 IPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPL 426
Query: 120 GMLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFEFGVTLR 158
+++ ++LL+ + F +
Sbjct: 427 ARMELFLFFTSLLQHFSFSVPTGQPRP-SHHGVFAFLVS 464
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 99 bits (250), Expect = 2e-25
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 11/163 (6%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITREIQADKYT 59
V E+ QV+G + +P L + + E +R P+ I T Y
Sbjct: 316 VQAELDQVVG--RDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYH 373
Query: 60 IPIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSE--ISRRNPNAYLPFSSGPRNCVGS 117
IP V + ++ DP W NP F P RFL + I++ + + FS G R C+G
Sbjct: 374 IPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGE 433
Query: 118 KYGMLQMKTTLSTLLRRY--RVLPGDKCRSVEDVRFEFGVTLR 158
+ +Q+ +S L + R P + + F +G+T++
Sbjct: 434 ELSKMQLFLFISILAHQCDFRANPNEP----AKMNFSYGLTIK 472
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 98.8 bits (247), Expect = 7e-25
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 12/164 (7%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITREIQADKYT 59
+ E+ V+G E P +L L I ET R P I TR+ + +
Sbjct: 319 IQKELDTVIG--RERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFY 376
Query: 60 IPIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSE---ISRRNPNAYLPFSSGPRNCVG 116
IP V +Q++ DP W +P F+P+RFL ++ I++ + F G R C+G
Sbjct: 377 IPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIG 436
Query: 117 SKYGMLQMKTTLSTLLRRYR--VLPGDKCRSVEDVRFEFGVTLR 158
++ L+ LL++ V PG K D+ +G+T++
Sbjct: 437 EVLAKWEIFLFLAILLQQLEFSVPPGVK----VDLTPIYGLTMK 476
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 98.4 bits (246), Expect = 9e-25
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 10/163 (6%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITREIQADKYT 59
+Y+EI Q +G PT L LL I+E LRL P AP+ I + ++
Sbjct: 310 LYEEIDQNVG--FSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFA 367
Query: 60 IPIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSE--ISRRNPNAYLPFSSGPRNCVGS 117
+ G V ++ +H + + W P F P+RFL +YLPF +GPR+C+G
Sbjct: 368 VDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGE 427
Query: 118 KYGMLQMKTTLSTLLRRYR--VLPGDKCRSVEDVRFEFGVTLR 158
++ ++ LL+R+ V + + + V
Sbjct: 428 ILARQELFLIMAWLLQRFDLEVPDDGQ---LPSLEGIPKVVFL 467
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 95.3 bits (238), Expect = 1e-23
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 3/159 (1%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITREIQADKYT 59
V +EI +V+G P + V+ E R P + +T +I+ Y
Sbjct: 306 VQEEIERVIG--RNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYL 363
Query: 60 IPIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKY 119
IP G T+ + + D + + NP F P FL + + ++PFS+G R CVG
Sbjct: 364 IPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEAL 423
Query: 120 GMLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFEFGVTLR 158
+++ L+++L+ + + ++++ G
Sbjct: 424 AGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASV 462
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 94.5 bits (236), Expect = 2e-23
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 3/159 (1%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITREIQADKYT 59
+++EI +V+G P +P QE+ + V+ E R P + TR+ Y
Sbjct: 304 LHEEIDRVIG--PSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYL 361
Query: 60 IPIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKY 119
IP G V + + D + + +P F+P+ FL + + + PFS+G R C G
Sbjct: 362 IPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAGEGL 421
Query: 120 GMLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFEFGVTLR 158
+++ L +L+ + + P + ++ G
Sbjct: 422 ARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCI 460
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 94.2 bits (235), Expect = 3e-23
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 3/159 (1%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITREIQADKYT 59
V EI QV+G P D ++ VI E RL P + +T++ Q Y
Sbjct: 305 VQKEIEQVIG--SHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYV 362
Query: 60 IPIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKY 119
IP V + DPR++ P+ F P FL + + + ++PFS G R C+G
Sbjct: 363 IPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGI 422
Query: 120 GMLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFEFGVTLR 158
++ +T+L+ + + ++ E GV
Sbjct: 423 ARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNV 461
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 93.8 bits (234), Expect = 3e-23
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 1 VYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITREIQADKYT 59
V++EI +V+G P ++ ++ + VI E R P+ + R + ++ + +
Sbjct: 305 VHEEIDRVIG--KNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFF 362
Query: 60 IPIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKY 119
+P G V + + RDP +SNP F P FL + + +A++PFS G RNC G
Sbjct: 363 LPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGL 422
Query: 120 GMLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFEFGVTLR 158
+++ +T+++ +R+ + ++ G
Sbjct: 423 ARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATI 461
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 66.2 bits (162), Expect = 1e-13
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Query: 20 DQIQELH----LLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
+Q+ ++ L+ R I ETLR P +I R ++++ I V I +R
Sbjct: 290 EQMNDVLADRSLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANR 349
Query: 76 DPRHWSNPHCFQPDR-FLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR 134
DP + P F R L + + +L F SG NCVG+ + +++ + +L +
Sbjct: 350 DPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDK 409
Query: 135 YRVL 138
R +
Sbjct: 410 MRNI 413
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 63.8 bits (156), Expect = 1e-12
Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 18/143 (12%)
Query: 20 DQIQEL----HLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
Q L + VI+ET+R P ++ R+ ++ +T+P G T+ + HR
Sbjct: 277 GQWAALAADGSRASAVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHR 336
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRY 135
DP PDRF P R +L F G C+G+ L+ L L R+
Sbjct: 337 DPTIVGA-----PDRFDP----DRAQIRHLGFGKGAHFCLGAPLARLEATVALPALAARF 387
Query: 136 RVLPGDKCRSVEDVRFEFGVTLR 158
R + ++ +TLR
Sbjct: 388 PEA-----RLSGEPEYKRNLTLR 405
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 63.8 bits (156), Expect = 1e-12
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 13/120 (10%)
Query: 20 DQIQEL----HLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
+Q+ +L L+ ++E LR + R + +I TI G V + +R
Sbjct: 255 EQLLKLRENPDLIGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANR 314
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRY 135
DP ++N PD F R+PN +L F G C+GS L+ + ++TLL+R
Sbjct: 315 DPSIFTN-----PDVFDI----TRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRM 365
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 63.0 bits (154), Expect = 2e-12
Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 13/123 (10%)
Query: 20 DQIQELH----LLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
D+ L L +E +R R TR+++ TI G V F+ +R
Sbjct: 272 DEFARLRADPSLARNAFEEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANR 331
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRY 135
DPR W + PDR+ R + ++ F SG CVG L+ + L+ L R+
Sbjct: 332 DPRRWDD-----PDRYDI----TRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAALARKV 382
Query: 136 RVL 138
+
Sbjct: 383 AAI 385
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 62.7 bits (153), Expect = 2e-12
Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 17/143 (11%)
Query: 20 DQIQEL----HLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
D + EL ++E +R P + R +I+ + IP G+ V A + +R
Sbjct: 275 DVLDELRTTPESTPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANR 334
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRY 135
DP + + PD R + F G C+G+ + + L LL
Sbjct: 335 DPARFPD-----PDVLDV----HRAAERQVGFGLGIHYCLGATLARAEAEIGLRALLDGI 385
Query: 136 RVLPGDKCRSVEDVRFEFGVTLR 158
L R +V + +
Sbjct: 386 PAL----GRGAHEVEYADDMVFH 404
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 62.7 bits (153), Expect = 3e-12
Identities = 30/151 (19%), Positives = 59/151 (39%), Gaps = 26/151 (17%)
Query: 9 LGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITREIQADKYTIPIGATVA 67
+ ++PE P ++E LR P P+ R + + + IP G V
Sbjct: 279 IKENPELAPQ------------AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVF 326
Query: 68 AFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTT 127
+ HRDPR +++ DRF +I+ + + F GP C+G+ L++
Sbjct: 327 MCAHVAHRDPRVFAD-----ADRF---DITVKREAPSIAFGGGPHFCLGTALARLELTEA 378
Query: 128 LSTLLRRYRVLPGDKCRSVEDVRFEFGVTLR 158
++ L R + ++ + + +
Sbjct: 379 VAALATRLDPP-----QIAGEITWRHELGVA 404
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 62.4 bits (152), Expect = 3e-12
Identities = 30/150 (20%), Positives = 45/150 (30%), Gaps = 25/150 (16%)
Query: 9 LGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAA 68
+ DDP R + E LRL+PA + R T E++ ++ I G V
Sbjct: 248 IADDPAAAQ------------RTVAEVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVV 295
Query: 69 FIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTL 128
+ +RDP ++ PDR R + + L
Sbjct: 296 VVAAANRDPEVFAE-----PDRLDV----DRPDADRALSAHRGHPGRLEELVTALATAAL 346
Query: 129 STLLRRYRVLPGDKCRSVEDVRFEFGVTLR 158
+ L S VR LR
Sbjct: 347 RAAAKALPGL----TPSGPVVRRRRSPVLR 372
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 62.3 bits (152), Expect = 3e-12
Identities = 27/143 (18%), Positives = 45/143 (31%), Gaps = 16/143 (11%)
Query: 20 DQIQELH----LLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
+ +I E +R+ P R T +++ I G+ + I +R
Sbjct: 254 EVFTAFRNDESARAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANR 313
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRY 135
DP + +P F R + L F GP +C G + T + L RY
Sbjct: 314 DPEVFDDPDVFDHTR-------PPAASRNLSFGLGPHSCAGQIISRAEATTVFAVLAERY 366
Query: 136 RVLPGDKCRSVEDVRFEFGVTLR 158
+ E+ R
Sbjct: 367 ERI-----ELAEEPTVAHNDFAR 384
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 61.9 bits (151), Expect = 5e-12
Identities = 32/129 (24%), Positives = 48/129 (37%), Gaps = 15/129 (11%)
Query: 20 DQIQELH----LLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
DQ + L + ++E LRL + R TR++ TIP G V +R
Sbjct: 271 DQRRLLLDDPEGIPDAVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANR 330
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR- 134
D R + R P L FS G +C+G+ +Q + L+ LL R
Sbjct: 331 DERQYGP----DAAELDV----TRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLARC 382
Query: 135 --YRVLPGD 141
+ V
Sbjct: 383 PDFEVAESR 391
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 60.7 bits (148), Expect = 1e-11
Identities = 26/129 (20%), Positives = 44/129 (34%), Gaps = 15/129 (11%)
Query: 20 DQIQEL----HLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
+ + L L+ E +R YP + R+ ++ AD TI G V +
Sbjct: 255 EDQRLLRERPDLIPAAADELMRRYPTV-AVSRNAVADVDADGVTIRKGDLVYLPSVLHNL 313
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR- 134
DP + P + DR P + G CVG+ +++ L L
Sbjct: 314 DPASFEAPEEVRFDR-------GLAPIRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGM 366
Query: 135 --YRVLPGD 141
+ + P
Sbjct: 367 PEFALAPDK 375
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 60.4 bits (147), Expect = 1e-11
Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 11/123 (8%)
Query: 20 DQIQELH----LLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
+ +++E LR P P + R T+ + IP V ++ +R
Sbjct: 262 AHWDAAAEDPGRIPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANR 321
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRY 135
D +P F P R + A L F G C+G+ L+ + L ++ R+
Sbjct: 322 DSDAHDDPDRFDPSR-------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
Query: 136 RVL 138
L
Sbjct: 375 GRL 377
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 59.1 bits (144), Expect = 4e-11
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 20 DQIQEL----HLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
DQ+ L LL + ++E LR P+ R + +++ + V +R
Sbjct: 254 DQLDLLRRRPDLLAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANR 313
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR 134
DPR + PD F R+P + F +G R C+GS Q++ ++ L R
Sbjct: 314 DPRRYDR-----PDDFDI----ERDPVPSMSFGAGMRYCLGSYLARTQLRAAVAALARL 363
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 59.2 bits (144), Expect = 4e-11
Identities = 31/144 (21%), Positives = 54/144 (37%), Gaps = 19/144 (13%)
Query: 20 DQIQEL----HLLTRVIKETLRLYPAAPI-IGRHITREIQADKYTIPIGATVAAFIYQIH 74
+ ++ + L+ + E LR I R ++++ +I G V I
Sbjct: 275 EALELVKAEPGLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSAL 334
Query: 75 RDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR 134
RD +S PD F RR+ +A L + GP C G L+ + + T+ RR
Sbjct: 335 RDGTVFSR-----PDVFDV----RRDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRR 385
Query: 135 YRVLPGDKCRSVEDVRFEFGVTLR 158
+ + + E F + R
Sbjct: 386 FPEM-----KLKETPVFGYHPAFR 404
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 59.2 bits (144), Expect = 4e-11
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 13/120 (10%)
Query: 20 DQIQELH----LLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
DQ+ + L ++E LR R E++ IP +TV +R
Sbjct: 262 DQLALVRRDPSALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANR 321
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRY 135
DP+ + + P RF R+ +L F G C+G L+ + L L R+
Sbjct: 322 DPKQFPD-----PHRFDV----TRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 58.0 bits (141), Expect = 1e-10
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 16/125 (12%)
Query: 20 DQIQELH----LLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
+QI L ++ V++E LR + I R +I+ TI G V I ++R
Sbjct: 264 EQIDVLLRDPGAVSGVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNR 323
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRY 135
D + + N PD F RRN ++ F G C+G +++ L L R
Sbjct: 324 DAKAYEN-----PDIFDA----RRNARHHVGFGHGIHQCLGQNLARAELEIALGGLFAR- 373
Query: 136 RVLPG 140
+PG
Sbjct: 374 --IPG 376
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 58.0 bits (141), Expect = 1e-10
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 27 LLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHRDPRHWSNPHCF 86
L + I+E LR P R ++ TI G V +I +RD + +
Sbjct: 239 LYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHD---- 294
Query: 87 QPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRYRVL 138
++F+P RNPN +L F SG C+G+ L+ + + +R+R +
Sbjct: 295 -GEKFIP----DRNPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHI 341
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 57.6 bits (140), Expect = 2e-10
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 24/133 (18%)
Query: 9 LGDDPETVPTYDQIQELHLLTRVIKETLRLY-PAAPIIGRHITREIQADKYTIPIGATVA 67
L + PE +P ++E LR+ A + R T +IQ + G V
Sbjct: 259 LHEKPELIP------------AGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVL 306
Query: 68 AFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTT 127
+ + DP H+ N P E+ R NP ++L F G C GS G +
Sbjct: 307 VLLEGANFDPEHFPN-----PGSI---ELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIG 358
Query: 128 LSTLLRRYRVLPG 140
+ LL++ +PG
Sbjct: 359 IEALLKK---MPG 368
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 57.3 bits (139), Expect = 2e-10
Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 17/132 (12%)
Query: 20 DQIQEL----HLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
+ + L L+ + E LR Y A + GR +T+E+ T+ G T + R
Sbjct: 253 ELRRRLIAHPELIPNAVDELLRFYGPAMV-GRLVTQEVTVGDITMKPGQTAMLWFPIASR 311
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR- 134
D + + PD + R PN +L G C+G+ ++ + ++ L+R
Sbjct: 312 DRSAFDS-----PDNIVI----ERTPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRI 362
Query: 135 --YRVLPGDKCR 144
+ + P +C
Sbjct: 363 PEFSLDPNKECE 374
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 56.1 bits (136), Expect = 6e-10
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 20/128 (15%)
Query: 9 LGDDPETVPTYDQIQELHLLTRVIKETLRLY-PAAPIIGRHITREIQADKYTIPIGATVA 67
+ V++ETLR P + ++ R ++ IP G +
Sbjct: 268 VLSGEAEWSA------------VVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALI 315
Query: 68 AFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTT 127
+ RD R H DRF +++R + N ++ F GP C G+ ++
Sbjct: 316 VSYGALGRDERA----HGPTADRF---DLTRTSGNRHISFGHGPHVCPGAALSRMEAGVA 368
Query: 128 LSTLLRRY 135
L L R+
Sbjct: 369 LPALYARF 376
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 55.7 bits (135), Expect = 7e-10
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 9/107 (8%)
Query: 32 IKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHRDPRHWSNPHCFQPDRF 91
++E LR P R +++ I G V +I +RD + + PD F
Sbjct: 244 VEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKD-----PDSF 298
Query: 92 LPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRYRVL 138
+P R PN +L F SG C+G+ L+ + L +++RV
Sbjct: 299 IP----DRTPNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVK 341
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 55.3 bits (134), Expect = 8e-10
Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 13/123 (10%)
Query: 20 DQIQEL----HLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
DQ L LL I+E LR + R +T + + + G + +
Sbjct: 251 DQWDLLQRDPSLLPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANF 310
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRY 135
D + P F RNPN++L F G C+G++ L++ +LRR
Sbjct: 311 DEAVFCEPEKFDVQ---------RNPNSHLAFGFGTHFCLGNQLARLELSLMTERVLRRL 361
Query: 136 RVL 138
L
Sbjct: 362 PDL 364
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 55.4 bits (134), Expect = 9e-10
Identities = 24/129 (18%), Positives = 41/129 (31%), Gaps = 17/129 (13%)
Query: 20 DQIQEL----HLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
+ QEL + +E LR + GR +T + + + G +
Sbjct: 270 EHRQELIERPERIPAACEELLRRFSLVAD-GRILTSDYEFHGVQLKKGDQILLPQMLSGL 328
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR- 134
D R + P R ++ F G C+G ++ TL L R
Sbjct: 329 DERENACPMHVDFS---------RQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRI 379
Query: 135 --YRVLPGD 141
+ + PG
Sbjct: 380 PDFSIAPGA 388
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 55.3 bits (134), Expect = 9e-10
Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 14/121 (11%)
Query: 20 DQIQELH----LLTRVIKETLRLY-PAAPIIGRHITREIQADKYTIPIGATVAAFIYQIH 74
DQ + L L++ ++E LR P + R ++ TIP G V + +
Sbjct: 257 DQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAAN 316
Query: 75 RDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR 134
RD PDR R+ + + F G C+G++ L+ + + L
Sbjct: 317 RDADWMPE-----PDRLDI----TRDASGGVFFGHGIHFCLGAQLARLEGRVAIGRLFAD 367
Query: 135 Y 135
Sbjct: 368 R 368
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 55.4 bits (134), Expect = 1e-09
Identities = 33/121 (27%), Positives = 47/121 (38%), Gaps = 14/121 (11%)
Query: 20 DQIQELH----LLTRVIKETLRLY-PAAPIIGRHITREIQADKYTIPIGATVAAFIYQIH 74
DQ+ L LL ++E LR P R + D IP G TV + H
Sbjct: 284 DQLAALRADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAH 343
Query: 75 RDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR 134
R P + + P RF RR+ +L F G C+G+ L+ + + LL R
Sbjct: 344 RTPERFPD-----PHRFDI----RRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLER 394
Query: 135 Y 135
Sbjct: 395 C 395
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 55.0 bits (133), Expect = 1e-09
Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 15/122 (12%)
Query: 20 DQIQEL----HLLTRVIKETLRLY-PAAPIIGRHITREIQ-ADKYTIPIGATVAAFIYQI 73
DQ+ + V++ETLR + R+ +I D TI G + A
Sbjct: 263 DQLALVRKGEVTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAA 322
Query: 74 HRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLR 133
+R P + D F R +L F G C+G+ +++ L +L
Sbjct: 323 NRHPDWHED-----ADTFDA----TRTVKEHLAFGHGVHFCLGAPLARMEVTLALESLFG 373
Query: 134 RY 135
R+
Sbjct: 374 RF 375
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 54.9 bits (133), Expect = 1e-09
Identities = 30/129 (23%), Positives = 49/129 (37%), Gaps = 23/129 (17%)
Query: 9 LGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG--RHITREIQADKYTIPIGATV 66
L D PE +P+ ++E R P R+ ++ TI G V
Sbjct: 280 LLDRPELIPS------------AVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPV 327
Query: 67 AAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKT 126
A +RD + + DR R PN +L F G +C+G+ ++++
Sbjct: 328 LASTGAANRDQAQFPD-----ADRIDV----DRTPNQHLGFGHGVHHCLGAPLARVELQV 378
Query: 127 TLSTLLRRY 135
L LL+R
Sbjct: 379 ALEVLLQRL 387
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 55.0 bits (133), Expect = 1e-09
Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 15/122 (12%)
Query: 20 DQIQELH----LLTRVIKETLRLYPAAPIIG--RHITREIQADKYTIPIGATVAAFIYQI 73
+ + L + R I E LR P +G R +++ I G V
Sbjct: 262 ELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAA 321
Query: 74 HRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLR 133
+RDP + + PDR R+PN ++ F GP C G L+ + + +L
Sbjct: 322 NRDPEVFPD-----PDRIDF----ERSPNPHVSFGFGPHYCPGGMLARLESELLVDAVLD 372
Query: 134 RY 135
R
Sbjct: 373 RV 374
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 54.6 bits (132), Expect = 1e-09
Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 21/127 (16%)
Query: 9 LGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAA 68
L D V T V++E LR A + R T ++ + +P G V A
Sbjct: 280 LRDGSADVDT------------VVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVA 327
Query: 69 FIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTL 128
++ +RDP + +P F P R PN ++ F G +C+GS +++ L
Sbjct: 328 WLPAANRDPAEFDDPDTFLPG---------RKPNRHITFGHGMHHCLGSALARIELSVVL 378
Query: 129 STLLRRY 135
L R
Sbjct: 379 RVLAERV 385
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 54.6 bits (132), Expect = 2e-09
Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 15/122 (12%)
Query: 20 DQIQELH----LLTRVIKETLRLYPAAPIIG--RHITREIQADKYTIPIGATVAAFIYQI 73
+ + + + E LR +G R +++ I G V
Sbjct: 265 ELMARMRERPGARGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAA 324
Query: 74 HRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLR 133
+RDP + + PDR R+PN +L + +G C G+ +Q + + TLL
Sbjct: 325 NRDPDVFPD-----PDRIDL----DRDPNPHLAYGNGHHFCTGAVLARMQTELLVDTLLE 375
Query: 134 RY 135
R
Sbjct: 376 RL 377
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 54.2 bits (131), Expect = 2e-09
Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 12/121 (9%)
Query: 20 DQIQELH----LLTRVIKETLRLY-PAAPIIGRHITREIQADKYTIPIGATVAAFIYQIH 74
DQ+ +L L + ++E R + +A I R ++ + + A +
Sbjct: 261 DQLAQLKANPSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 320
Query: 75 RDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR 134
RD + NP F +R + P L F G C+ ++ T STL ++
Sbjct: 321 RDEEVFENPDEFNMNR-------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQK 373
Query: 135 Y 135
+
Sbjct: 374 F 374
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 53.8 bits (130), Expect = 3e-09
Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 14/121 (11%)
Query: 20 DQIQELH----LLTRVIKETLRLY-PAAPIIGRHITREIQADKYTIPIGATVAAFIYQIH 74
+QI R + E +R R ++ I G +V + +
Sbjct: 257 EQIDAFRGDEQSAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAAN 316
Query: 75 RDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR 134
RDP + DR R P ++ F G +C+G+ L+++T + L RR
Sbjct: 317 RDPALAPD-----VDRLDV----TREPIPHVAFGHGVHHCLGAALARLELRTVFTELWRR 367
Query: 135 Y 135
+
Sbjct: 368 F 368
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 53.8 bits (130), Expect = 3e-09
Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 14/121 (11%)
Query: 20 DQIQELH----LLTRVIKETLRLY-PAAPIIGRHITREIQADKYTIPIGATVAAFIYQIH 74
+Q+ + ++E LR + A + R T +++ +I G V + +
Sbjct: 266 EQLTVVKANPGRTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSAN 325
Query: 75 RDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR 134
DP + + P R +L F GP C+G ++++ TL RR
Sbjct: 326 WDPAVFKD-----PAVLDV----ERGARHHLAFGFGPHQCLGQNLARMELQIVFDTLFRR 376
Query: 135 Y 135
Sbjct: 377 I 377
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 53.8 bits (130), Expect = 3e-09
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 12/121 (9%)
Query: 20 DQIQEL----HLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
DQ +L L+ ++ E +R + R + + TI G V + Y +R
Sbjct: 286 DQFAKLKANPALVETMVPEIIRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNR 345
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRY 135
D P + F I R P +L F G CVG++ +Q++ +L R+
Sbjct: 346 DDEVIDRP-----EEF---IIDRPRPRQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRF 397
Query: 136 R 136
Sbjct: 398 S 398
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 53.8 bits (130), Expect = 3e-09
Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 23/129 (17%)
Query: 9 LGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG--RHITREIQADKYTIPIGATV 66
DP+ + R ++E LR A + R+ + +++ TI G V
Sbjct: 267 ALADPDVMA------------RAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLV 314
Query: 67 AAFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKT 126
+ + D R ++ P+ F R PN +L F G +C+G+ L+++T
Sbjct: 315 LFDLGLPNFDERAFTG-----PEEFDA----ARTPNPHLTFGHGIWHCIGAPLARLELRT 365
Query: 127 TLSTLLRRY 135
+ L R
Sbjct: 366 MFTKLFTRL 374
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 53.4 bits (129), Expect = 4e-09
Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 14/121 (11%)
Query: 20 DQIQELH----LLTRVIKETLRLY-PAAPIIGRHITREIQADKYTIPIGATVAAFIYQIH 74
+ EL L+ + E LR+ A I R +I+ T+P V A + +
Sbjct: 270 ELPAELRKDPDLMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGAN 329
Query: 75 RDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR 134
DP + + P+R R N ++ F G CVG L+++ L TLLRR
Sbjct: 330 HDPEQFDD-----PERVDF----HRTDNHHVAFGYGVHQCVGQHLARLELEVALETLLRR 380
Query: 135 Y 135
Sbjct: 381 V 381
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 53.4 bits (129), Expect = 4e-09
Identities = 34/145 (23%), Positives = 57/145 (39%), Gaps = 18/145 (12%)
Query: 20 DQIQELH----LLTRVIKETLRLYPAAPI-IGRHITREIQADKYTIPIGATVAAFIYQIH 74
+Q L L+ ++E LR A I GR T +I+ + I G V +
Sbjct: 265 EQYAALRADRSLVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIAN 324
Query: 75 RDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR 134
RD + + PD R+ +L F G C+G L+++ L+ L+ R
Sbjct: 325 RDGTVYED-----PDALDI----HRSARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
Query: 135 YRVLPGDK-CRSVEDVRFEFGVTLR 158
+P + VE + G T++
Sbjct: 376 ---VPTLRLAVPVEQLVLRPGTTIQ 397
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 53.5 bits (129), Expect = 4e-09
Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 17/129 (13%)
Query: 20 DQIQEL----HLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
+ + EL L R +E R +P R + ++ + + G +
Sbjct: 276 ELVAELRSDPLKLMRGAEEMFRRFPVVSE-ARMVAKDQEYKGVFLKRGDMILLPTALHGL 334
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR- 134
D P R ++ F GP C G +++ TL L+R
Sbjct: 335 DDAANPEPWKLDFS---------RRSISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRI 385
Query: 135 --YRVLPGD 141
+ G+
Sbjct: 386 PEFSFKEGE 394
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 53.0 bits (128), Expect = 5e-09
Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 14/121 (11%)
Query: 20 DQIQELH----LLTRVIKETLRLY-PAAPIIGRHITREIQADKYTIPIGATVAAFIYQIH 74
DQ+ L L+ ++E LR R TR+++ I G V A +
Sbjct: 258 DQLALLREDPSLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAAD 317
Query: 75 RDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR 134
DP P+RF R P +L F G C+G + ++++ TL RR
Sbjct: 318 FDPAFVEE-----PERFDI----TRRPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRR 368
Query: 135 Y 135
Sbjct: 369 L 369
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 53.1 bits (128), Expect = 6e-09
Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 14/121 (11%)
Query: 20 DQIQEL----HLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
+ + E+ L R ++E R + R++ +++ + G +
Sbjct: 277 ETVAEMRREPLKLQRGVEELFRRFAVVSD-ARYVVSDMEFHGTMLKEGDLILLPTALHGL 335
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRY 135
D RH +P R + F+ GP C G L++ L L R
Sbjct: 336 DDRHHDDPMTVDLS---------RRDVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARI 386
Query: 136 R 136
Sbjct: 387 P 387
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 52.3 bits (126), Expect = 1e-08
Identities = 28/121 (23%), Positives = 42/121 (34%), Gaps = 14/121 (11%)
Query: 20 DQIQELH----LLTRVIKETLRLY-PAAPIIGRHITREIQADKYTIPIGATVAAFIYQIH 74
QI+ L RV+ E +R P R +++ D I G V I +
Sbjct: 266 GQIELLFESPEKAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMAN 325
Query: 75 RDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR 134
RD + PD R + + F G CVG+ ++ TL RR
Sbjct: 326 RDEALTPD-----PDVLDA----NRAAVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRR 376
Query: 135 Y 135
+
Sbjct: 377 F 377
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 51.8 bits (125), Expect = 1e-08
Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 11/106 (10%)
Query: 32 IKETLRLY-PAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHRDPRHWSNPHCFQPDR 90
++ETLR Y P + R + + I G V ++ +RD + P F+ R
Sbjct: 222 VEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR 281
Query: 91 FLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRYR 136
+L F G C+G+ L+ L+ +L ++
Sbjct: 282 ----------REMHLAFGIGIHMCLGAPLARLEASIALNDILNHFK 317
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 50.0 bits (120), Expect = 6e-08
Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 15/123 (12%)
Query: 20 DQIQEL-----HLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIH 74
+Q L ++E +R + R +T++I+ + G V+ + +
Sbjct: 295 EQRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSAN 354
Query: 75 RDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFS-SGPRNCVGSKYGMLQMKTTLSTLLR 133
RD +++P F RNPN +L F G C+G+ +++ L R
Sbjct: 355 RDESKFADPWTFDLA---------RNPNPHLGFGGGGAHFCLGANLARREIRVAFDELRR 405
Query: 134 RYR 136
+
Sbjct: 406 QMP 408
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 49.2 bits (118), Expect = 1e-07
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 13/121 (10%)
Query: 20 DQIQELH----LLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHR 75
+Q+ L+ R++ E +R R + + I G + +R
Sbjct: 288 EQLALAKSDPALIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANR 347
Query: 76 DPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRY 135
D +SNP F R PN +L F G C+G L+MK LL +
Sbjct: 348 DEEVFSNPDEFDITR---------FPNRHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKL 398
Query: 136 R 136
+
Sbjct: 399 K 399
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 48.4 bits (116), Expect = 2e-07
Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 19/121 (15%)
Query: 20 DQIQELH----LLTRVIKETLRLY-PAAPIIGRHITREIQADKYTIPIGATVAAFIYQIH 74
DQ+ L L+ +E LR R +++ I G + + +
Sbjct: 247 DQMALLREKPELIDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATN 306
Query: 75 RDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRR 134
R P DRF R ++ F G +C+G+ LQ++ L ++ R
Sbjct: 307 RAP----------GDRFDI----TREKATHMAFGHGIHHCIGAPLARLQLRVALPAVVGR 352
Query: 135 Y 135
+
Sbjct: 353 F 353
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 48.1 bits (115), Expect = 3e-07
Identities = 25/128 (19%), Positives = 41/128 (32%), Gaps = 21/128 (16%)
Query: 9 LGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAA 68
+ D +P +++E +R R + + I G +
Sbjct: 315 VKADRNLLPG------------IVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLML 362
Query: 69 FIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTTL 128
+ DP + P F P R N +L F +G C+G L+M+ L
Sbjct: 363 NYVAANHDPAQFPEPRKFDPTR---------PANRHLAFGAGSHQCLGLHLARLEMRVLL 413
Query: 129 STLLRRYR 136
LL R
Sbjct: 414 DVLLDRVD 421
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 46.5 bits (111), Expect = 9e-07
Identities = 21/120 (17%), Positives = 37/120 (30%), Gaps = 12/120 (10%)
Query: 20 DQIQELH--LLTRVIKETLRLYPAAPIIGRHITREIQADKYTIPIGATVAAFIYQIHRDP 77
DQ + E +R R R+ + I G V F + D
Sbjct: 289 DQWELYKKVRPETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDE 348
Query: 78 RHWSNPHCFQPDRFLPSEISRRNPNAYLPFS-SGPRNCVGSKYGMLQMKTTLSTLLRRYR 136
+ +P F RNPN ++ F +G C+G+ + + + +
Sbjct: 349 EVFQDPFTFNIL---------RNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMP 399
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 33.4 bits (75), Expect = 0.018
Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 15/40 (37%)
Query: 23 QELHLLTRVIKETLRLY-P-AAPIIGRHITREIQADKYTI 60
Q L + ++ +L+LY +AP + I+A T+
Sbjct: 20 QAL----KKLQASLKLYADDSAPALA------IKA---TM 46
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 34.3 bits (78), Expect = 0.019
Identities = 16/80 (20%), Positives = 24/80 (30%), Gaps = 19/80 (23%)
Query: 38 LYPAAPIIGRHITR---EIQADKYTIPIGAT-------------VAAFIYQIHRDPRHWS 81
L PA+ +I + + + A IP+ T + I R P W
Sbjct: 432 LVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWE 491
Query: 82 NPHCFQPDRFL---PSEISR 98
F+ L P S
Sbjct: 492 TTTQFKATHILDFGPGGASG 511
Score = 28.1 bits (62), Expect = 2.0
Identities = 14/118 (11%), Positives = 32/118 (27%), Gaps = 35/118 (29%)
Query: 38 LYPAAPIIGRHITREI--QADKYTIPIGATVAAFIYQIHRDPRHWSNPHCFQPDRFLPSE 95
LY + +++ +AD + +D +S +
Sbjct: 1635 LYKTSKAA-----QDVWNRADNHF---------------KDTYGFS-----------ILD 1663
Query: 96 ISRRNPNAYLPFSSGPRNC-VGSKYGMLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFE 152
I NP G + + Y + +T + L+ ++ + F
Sbjct: 1664 IVINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFK-EINEHSTSYTFR 1720
Score = 26.2 bits (57), Expect = 7.1
Identities = 28/193 (14%), Positives = 59/193 (30%), Gaps = 67/193 (34%)
Query: 4 EIVQVLGDDPETVPTY---------DQIQELHLLTRVIKETLRLYPAAPIIGRHITREIQ 54
I++ ++ E VP+ +Q+Q+ + +T PA + I+
Sbjct: 322 SILEDSLENNEGVPSPMLSISNLTQEQVQDY------VNKTNSHLPAGKQV--EISLVNG 373
Query: 55 ADKYTI---PIGATVAAFIYQIHRDPRHWSNPHCFQ---P---------DRFLPSEISRR 99
A + P ++ + + Q P +RFLP ++
Sbjct: 374 AKNLVVSGPP--QSLYGLNLTLRKAKA---PSGLDQSRIPFSERKLKFSNRFLP--VA-- 424
Query: 100 NPNAYLPFSSGPRNCVGSKYGMLQMKTTLSTLLRRYRVLPGDKCR-SVEDVRF-----EF 153
PF S + + + L + + +D++
Sbjct: 425 -----SPFH--------SHL----LVPASDLINKD---LVKNNVSFNAKDIQIPVYDTFD 464
Query: 154 GVTLRLLAGNDIR 166
G LR+L+G+
Sbjct: 465 GSDLRVLSGSISE 477
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 29.8 bits (66), Expect = 0.55
Identities = 24/129 (18%), Positives = 36/129 (27%), Gaps = 49/129 (37%)
Query: 20 DQIQELH--LLTRV-IKETLRLYPAAPI---------IGRHITREIQADKYTIPIGATVA 67
+ LH ++ I +T P IG H+ ++ T+
Sbjct: 440 ENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTL------- 492
Query: 68 AFIYQIHRDPRHWSNPHCFQPDRFLPSEISRRNPNAYLPFSSGPRNCVGSKYGMLQMKTT 127
F F RFL +I R+ S N GS LQ
Sbjct: 493 -F-------------RMVFLDFRFLEQKI--RH-------DSTAWNASGSILNTLQQ--- 526
Query: 128 LSTLLRRYR 136
L+ Y+
Sbjct: 527 ----LKFYK 531
>2xz4_A Peptidoglycan-recognition protein LF; immune system, innate
immunity; HET: 1PG; 1.72A {Drosophila melanogaster}
Length = 180
Score = 27.5 bits (61), Expect = 1.8
Identities = 9/39 (23%), Positives = 11/39 (28%)
Query: 8 VLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 46
+G P QI+ L RL P I
Sbjct: 108 FIGTFVNMEPPARQIEAAKRLMDEGVRLHRLQPDYHIYA 146
>2f2l_X Peptidoglycan recognition protein-LC isoform LCX;
protein-peptidoglycan complex, membrane protein, immune
SYST; HET: NAG HSQ MLD CIT; 2.10A {Drosophila
melanogaster} SCOP: d.118.1.1
Length = 167
Score = 27.4 bits (61), Expect = 1.9
Identities = 7/39 (17%), Positives = 13/39 (33%)
Query: 8 VLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 46
+G P Q++ LL + +L + G
Sbjct: 101 FIGTFTTRKPNERQLEACQLLLQEGVRLKKLTTNYRLYG 139
>2rkq_A Peptidoglycan-recognition protein-SD; innate immunity, TOLL,
pattern recognition, PGRP, glycoprotein, immune
response, secreted,; 1.50A {Drosophila melanogaster}
Length = 169
Score = 27.1 bits (60), Expect = 2.2
Identities = 6/39 (15%), Positives = 14/39 (35%)
Query: 8 VLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 46
+G+ E P + + L + +L ++G
Sbjct: 102 FIGNFEERAPNKEALDAAKELLEQAVKQAQLVEGYKLLG 140
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor,
P nucleotide-binding, RNA replication, viral protein;
HET: SFG; 2.00A {West nile virus}
Length = 321
Score = 27.2 bits (60), Expect = 3.0
Identities = 14/57 (24%), Positives = 17/57 (29%), Gaps = 7/57 (12%)
Query: 99 RNPNAYLPFSSGPR-NCVGSKYGMLQMKTTLSTLLRRYRVLPGDKCRSVEDVRFEFG 154
RN + + S N V S T LL R + EDV G
Sbjct: 234 RNSTHEMYWVSRASGNVVHSVN------MTSQVLLGRMEKRTWKGPQYEEDVNLGSG 284
>1wxq_A GTP-binding protein; structural genomics, riken structural
genomics/proteomics initiative, RSGI, NPPSFA; 2.60A
{Pyrococcus horikoshii} SCOP: c.37.1.8 d.15.10.2
Length = 397
Score = 27.2 bits (61), Expect = 3.1
Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 27 LLTRVIKETLRL---YPAAPIIGRHITR-EIQADKYTIPIGATVAAFIYQIHRD 76
++ RV+ + L+L YP + + + G+T +++H D
Sbjct: 308 VINRVVFDLLKLIPVYPVHDENKLTDQFGNVLPHVFLMKKGSTPRDLAFKVHTD 361
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane
protein; HET: BOG; 1.15A {Komagataella pastoris} PDB:
2w1p_A*
Length = 279
Score = 26.2 bits (58), Expect = 5.1
Identities = 7/23 (30%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 62 IGATVAAFIYQIHRDPRHWS-NP 83
+GA +A I+Q+ + + + NP
Sbjct: 251 LGAFLAYSIWQMWKWLNYQTTNP 273
>1oht_A CG14704 protein; peptidoglycan-recognition protein-LB isoform 2,
hydrolase; HET: TLA; 2.0A {Drosophila melanogaster}
SCOP: d.118.1.1
Length = 215
Score = 26.1 bits (57), Expect = 6.4
Identities = 7/39 (17%), Positives = 14/39 (35%)
Query: 8 VLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 46
++GD +P + L + PA ++G
Sbjct: 113 LIGDWRTELPPKQMLDAAKNLIAFGVFKGYIDPAYKLLG 151
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+,
oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP:
c.82.1.1 PDB: 1eyy_A*
Length = 510
Score = 26.1 bits (58), Expect = 6.9
Identities = 8/26 (30%), Positives = 11/26 (42%), Gaps = 2/26 (7%)
Query: 78 RHWSNPHCFQ--PDRFLPSEISRRNP 101
W P +Q P+ LP + NP
Sbjct: 471 HRWLRPVAYQALPESLLPDSLKAENP 496
>1sk4_A Peptidoglycan recognition protein I-alpha; alpha/beta MIX, immune
system; 1.65A {Homo sapiens} SCOP: d.118.1.1 PDB:
2aph_A* 1sk3_A* 1twq_A* 2eav_A 2eax_A*
Length = 163
Score = 25.5 bits (56), Expect = 7.4
Identities = 7/39 (17%), Positives = 13/39 (33%)
Query: 8 VLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 46
+G E P ++ L + L P ++G
Sbjct: 99 FIGYFVEKPPNAAALEAAQDLIQCAVVEGYLTPNYLLMG 137
>2f2l_A Peptidoglycan-recognition protein-LC isoform LCA;
protein-peptidoglycan complex, membrane protein, immune
SYST; HET: NAG HSQ MLD CIT; 2.10A {Drosophila
melanogaster} SCOP: d.118.1.1 PDB: 1z6i_A*
Length = 167
Score = 25.2 bits (55), Expect = 9.9
Identities = 6/39 (15%), Positives = 13/39 (33%)
Query: 8 VLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 46
+G P+ Q+ LL + ++ P+
Sbjct: 102 YIGSFKTIQPSAKQLSVTRLLLERGVKLGKIAPSYRFTA 140
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.141 0.430
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,748,169
Number of extensions: 157198
Number of successful extensions: 560
Number of sequences better than 10.0: 1
Number of HSP's gapped: 428
Number of HSP's successfully gapped: 99
Length of query: 170
Length of database: 6,701,793
Length adjustment: 87
Effective length of query: 83
Effective length of database: 4,272,666
Effective search space: 354631278
Effective search space used: 354631278
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 54 (24.5 bits)