BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy585
(111 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O15943|CADN_DROME Neural-cadherin OS=Drosophila melanogaster GN=CadN PE=1 SV=2
Length = 3097
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/59 (89%), Positives = 55/59 (93%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELT 59
YEL+LAASDNLKENYTTV+IHVKDVNDNPPVFERPTYRTQITEEDDR LPKRVLQ T
Sbjct: 1483 YELRLAASDNLKENYTTVIIHVKDVNDNPPVFERPTYRTQITEEDDRNLPKRVLQVTAT 1541
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 45/139 (32%)
Query: 18 VVIHVKDVNDNPPVFERPTYRTQITEEDD------------------------------- 46
+ I + D NDNPP F++ Y ++ E +D
Sbjct: 1400 IRIGIADKNDNPPYFDKSLYEAEVDENEDIQHTVLTVTAKDHDESSRIRYEITSGNIGGA 1459
Query: 47 ---RTLPKRVL-----------QYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLY 92
+ + + +YEL L ASD+L EN TTV+IH+ DVND PPVF Y
Sbjct: 1460 FAVKNMTGAIYVAGALDYETRRRYELRLAASDNLKENYTTVIIHVKDVNDNPPVFERPTY 1519
Query: 93 PAIMEEELPGPYPHSLLKL 111
+ EE P +L++
Sbjct: 1520 RTQITEEDDRNLPKRVLQV 1538
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 1 YELKLAASDNLK-ENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPK 51
Y +++ A D + T I VKD+ND PP F + + T++ E D LP+
Sbjct: 1710 YSIQVVAMDGGGLKGTGTASIRVKDINDMPPQFTKDEWFTEVDETDGTALPE 1761
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 13 ENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELTLVASDSLNENKTT 72
E + + + DVNDNPP+F+R Y + + D ++ +L+ + ASD +N
Sbjct: 1059 EGVCSFTVEITDVNDNPPLFDRQKYVENVKQ--DASIGTNILR----VSASDEDADNNGA 1112
Query: 73 VV 74
+V
Sbjct: 1113 IV 1114
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 1 YELKLAASDNLKENYTTV--VIHVKDVNDNPPVFERPTYRTQITEED 45
Y L + A+++ T+V I V DVNDN P FE P Y+ +ED
Sbjct: 723 YSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDED 769
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLKEN---YTTVVIHVKDVNDNPPVFERPTYRTQITE 43
+ + A D E Y V +++KD+NDN P+F + Y +TE
Sbjct: 1596 WRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGVYFGNVTE 1641
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 15 YTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
Y+ VV+ ++D+NDN P FER + E+
Sbjct: 1844 YSWVVVKLRDINDNKPHFERANVEVSVFED 1873
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 51 KRVLQYELTLVASDSLNENKT-TVVIHINDVNDMPPVF 87
+R Y + +VA D T T I + D+NDMPP F
Sbjct: 1705 ERTPDYSIQVVAMDGGGLKGTGTASIRVKDINDMPPQF 1742
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Query: 55 QYELTLVASD----SLNENKT------TVVIHINDVNDMPPVF-NTSLYPAIMEEELPGP 103
+YEL + A D +N ++T VV+ I DVND PVF + S Y +EE P
Sbjct: 926 KYELNVTAMDDGSCCVNGDQTIHTSTAVVVVFITDVNDNKPVFKDCSTYYPKVEEGAPNG 985
Query: 104 YP 105
P
Sbjct: 986 SP 987
>sp|Q9VJB6|CADN2_DROME Putative neural-cadherin 2 OS=Drosophila melanogaster GN=CadN2 PE=3
SV=2
Length = 2215
Score = 94.4 bits (233), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/59 (74%), Positives = 50/59 (84%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELT 59
YEL+L A+ N K NYTTVVI+V+DVNDNPPVF+R TYRTQITEEDDR LPKR+LQ T
Sbjct: 218 YELRLEATRNRKNNYTTVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQVTAT 276
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 55 QYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKL 111
+YEL L A+ + N TTVVI++ DVND PPVF+ Y + EE P +L++
Sbjct: 217 RYELRLEATRNRKNNYTTVVINVRDVNDNPPVFDRQTYRTQITEEDDRNLPKRILQV 273
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 6 AASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
SD Y+ VV+ ++D+NDN P F+R I E+
Sbjct: 629 GGSDKYHVAYSWVVVKLRDINDNVPKFDREHIEVSIYED 667
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 17 TVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELTLVASDSLNEN 69
T I VKD+ND PP F + + T++ E + +P+ + LT+ D N
Sbjct: 519 TASIRVKDLNDMPPQFTKDEWVTEVDETNGTYIPETPI---LTVTVQDEDETN 568
Score = 29.3 bits (64), Expect = 7.4, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 15 YTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y + +++KD+NDN P F + Y +TE
Sbjct: 405 YADIQVNLKDINDNAPQFPQGIYFGNVTE 433
>sp|Q967F4|HMR1_CAEEL Cadherin-related hmr-1 OS=Caenorhabditis elegans GN=hmr-1 PE=1 SV=1
Length = 2920
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELTL 60
Y L L ASD T V IH++DVNDN P FE+ Y T + EE D +PK +
Sbjct: 1405 YHLVLIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEE-DVDIPKVLFNVH--- 1460
Query: 61 VASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIME 97
A+D+ + K++ +++ + VF Y +E
Sbjct: 1461 -ATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIE 1496
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
++LK+ A ++ +E++ + I + DVNDN P F RP Y Q+ E+
Sbjct: 611 HKLKVTAREDNRESHVDLTIRIDDVNDNVPTFTRPLYTAQVRED 654
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 24/45 (53%)
Query: 55 QYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEE 99
QY L L+ASD + T V IHI DVND P F Y + EE
Sbjct: 1404 QYHLVLIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEE 1448
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 39 TQITEEDDRTLPKRVLQYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEE 98
T++ + DD LPK ++L + A + E+ + I I+DVND P F LY A + E
Sbjct: 597 TRLLDFDDPALPKL---HKLKVTAREDNRESHVDLTIRIDDVNDNVPTFTRPLYTAQVRE 653
Query: 99 ELP 101
++P
Sbjct: 654 DIP 656
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 51 KRVLQYELTLVASD--SLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEEL 100
++V Y LTL A+D S + T V+ + DVND+ P F L+ ++EE+
Sbjct: 1173 EQVNNYTLTLTATDMTSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEM 1224
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 14 NYTTVVIHVKDVNDNPPVFERPTYRTQIT 42
+ + V D+NDN P FERP+Y T ++
Sbjct: 961 GFCQFSVEVVDINDNSPQFERPSYETSVS 989
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 12 KENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
+E + V I V D+NDN P FE+ Y + E
Sbjct: 1641 REGFANVTIKVTDMNDNAPFFEKTRYEGSVEE 1672
>sp|Q24298|CADE_DROME DE-cadherin OS=Drosophila melanogaster GN=shg PE=1 SV=2
Length = 1507
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
YELK+ A D + ++YTTVVI ++DVNDNPPVF++ Y I EE
Sbjct: 592 YELKVRAFDGIYDDYTTVVIKIEDVNDNPPVFKQ-DYSVTILEE 634
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 53 VLQYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEE 98
+ +YEL + A D + ++ TTVVI I DVND PPVF I+EE
Sbjct: 589 ITEYELKVRAFDGIYDDYTTVVIKIEDVNDNPPVFKQDYSVTILEE 634
>sp|Q8R508|FAT3_RAT Protocadherin Fat 3 OS=Rattus norvegicus GN=Fat3 PE=1 SV=1
Length = 4555
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 65/156 (41%), Gaps = 56/156 (35%)
Query: 1 YELKLAASDNLKENYTTVVIH--VKDVNDNPPVFERPTYRTQITE--------------- 43
Y+L + ASD L V + V DVNDNPPVF++PTY T ++E
Sbjct: 2253 YKLTVRASDALTGARAEVTVDLLVDDVNDNPPVFDQPTYNTTLSESSLIGTPVLQLVSTD 2312
Query: 44 ----------------------------EDDRTLPKRVLQYELT------LVASD----S 65
L R+L +EL + A+D S
Sbjct: 2313 ADSGNNNLVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHCTLKVTATDNGFPS 2372
Query: 66 LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
L+ ++ V I+I+DVND PPVFN +Y + + E P
Sbjct: 2373 LS-SEVLVQIYISDVNDNPPVFNQLIYESYVSELAP 2407
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 52/136 (38%), Gaps = 50/136 (36%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITE-------------EDDRTLP------------ 50
TV I + DVNDNPP F + Y I+E ED + P
Sbjct: 3324 ATVSIDLTDVNDNPPRFSQDVYSAVISEDALEGDSVILLIAEDVDSKPNGQIRFSIVGGD 3383
Query: 51 ----------------------KRVLQYELTLVASDS---LNENKTTVVIHINDVNDMPP 85
+RV Y L + A DS + TTV I I+DVND P
Sbjct: 3384 RDNEFAVDPILGLVKVKKKLDRERVSGYSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSP 3443
Query: 86 VFNTSLYPAIMEEELP 101
VF + Y A+++E P
Sbjct: 3444 VFTPANYTAVIQENKP 3459
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 50/136 (36%), Gaps = 54/136 (39%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVL--------------------- 54
T+V I V D+NDNPPVFER Y + E D +L +VL
Sbjct: 3219 TSVTITVLDINDNPPVFERRDYLVTVPE--DTSLGTQVLSVFATSKDIGTNAEITYLIRS 3276
Query: 55 ----------------------------QYELTLVASDSLN---ENKTTVVIHINDVNDM 83
++ L + A D TV I + DVND
Sbjct: 3277 GNEQGKFRINPKTGGISVLEALDYEMCKRFYLVVEAKDGGTPALSTAATVSIDLTDVNDN 3336
Query: 84 PPVFNTSLYPAIMEEE 99
PP F+ +Y A++ E+
Sbjct: 3337 PPRFSQDVYSAVISED 3352
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 56/145 (38%), Gaps = 47/145 (32%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE---------------- 44
Y L + ASD L V + V DVNDN PV ++ Y + E+
Sbjct: 2997 YFLNITASDGLFVTQAMVEVTVSDVNDNSPVCDQVAYSASLPEDIPSNKIILKVSAKDAD 3056
Query: 45 --------------------------DDRTLP----KRVLQYELTLVASDSLNE-NKTTV 73
+ +TL +RV Y L A+D +TV
Sbjct: 3057 IGSNGDIRYSLYGSGNSDFFLDPESGELKTLALLDRERVPVYNLIARATDGGGRFCSSTV 3116
Query: 74 VIHINDVNDMPPVFNTSLYPAIMEE 98
++ + DVND PPVF+++ Y A + E
Sbjct: 3117 LLLLEDVNDNPPVFSSNHYTACVYE 3141
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 56/156 (35%), Gaps = 56/156 (35%)
Query: 1 YELKLAASDNLKENYTT-----VVIHVKDVNDNPPVFERPTYRTQITEED---------- 45
+ + ASD L E ++ V + V D+NDN PVF YR + E D
Sbjct: 2888 FSFFVVASD-LGEAFSLSSMALVSVKVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2946
Query: 46 ----DRTLPKRVLQYELT------------------------------------LVASDS 65
D + R + Y +T + ASD
Sbjct: 2947 TLDKDTSNINRQVSYHITGGNPRGRFALGMVQSEWKVYVKRPLDREEQDIYFLNITASDG 3006
Query: 66 LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
L + V + ++DVND PV + Y A + E++P
Sbjct: 3007 LFVTQAMVEVTVSDVNDNSPVCDQVAYSASLPEDIP 3042
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP-KRVLQYELTLVASDSLN-ENKTTV 73
+T++ VKD N N VF Y IT R L + Y+L + A++ + TV
Sbjct: 1698 STLIYEVKDGNING-VFTINPYSGVITTR--RALDYEHTSSYQLIIQATNMAGMASNATV 1754
Query: 74 VIHINDVNDMPPVFNTSLYPAIMEEELP 101
+ + D ND PPVF S Y + E P
Sbjct: 1755 SVQVVDENDNPPVFLFSQYSGSLSEAAP 1782
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 48 TLPKRVLQYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
T+ K V + E+ SD + K V I I D ND P F +LY + E +P
Sbjct: 436 TVKKEVYKLEV----SDKEGDAKAQVTIGIEDANDHTPEFQETLYETFVNESVP 485
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP--KRVLQYEL 58
Y + + +D T V I V D NDN P F +P Y I+E+ +P +LQ E
Sbjct: 1428 YNMSVEVTDGTNVAVTQVFITVLDNNDNGPEFSQPHYDVTISED----VPPDTEILQIE- 1482
Query: 59 TLVASDSLNENKTTVVIH 76
A+D ++K + IH
Sbjct: 1483 ---ATDRDEKHKLSYTIH 1497
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 12 KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYE 57
K ++ + ++V+D NDN PVF + +Y I E ++ ++Q E
Sbjct: 810 KSSWRLLTVNVEDANDNSPVFLQDSYSVSILES--SSIGTEIIQVE 853
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 12 KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQ 55
+ N V+++V+D ND+ P F P Y + E L VLQ
Sbjct: 1545 RRNLARVIVNVEDANDHSPYFTNPLYEASVFES--AALGSVVLQ 1586
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 4 KLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELTLVAS 63
KL SD + V I ++D ND+ P F+ Y T + E ++P V LT+ AS
Sbjct: 443 KLEVSDKEGDAKAQVTIGIEDANDHTPEFQETLYETFVNE----SVP--VGTNVLTVSAS 496
Query: 64 DSLNENKTTVVIHINDVNDMPPVFN 88
D + I +N +P N
Sbjct: 497 DKDKGENGYITYSIASLNLLPFAIN 521
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 15/22 (68%)
Query: 18 VVIHVKDVNDNPPVFERPTYRT 39
V I V DVNDNPPVF + + T
Sbjct: 1868 VNIEVTDVNDNPPVFTQAVFET 1889
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 1 YELKLAASDN---LKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYE 57
Y L + A D+ + TTV I + DVNDN PVF Y I E ++ + +LQ
Sbjct: 3411 YSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANYTAVIQE--NKPVGTSILQLV 3468
Query: 58 LT 59
+T
Sbjct: 3469 VT 3470
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 1 YELKLAAS---DNLKENYTTVV-IHVKDVNDNPPVFERPTYRTQITE 43
+ K+AA+ D + +T V + V D+NDN PVFE +Y T I E
Sbjct: 2778 FHFKVAATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSSYETIIME 2824
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 1 YELKLAASD--NLKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y+L + A++ + N TV + V D NDNPPVF Y ++E
Sbjct: 1736 YQLIIQATNMAGMASN-ATVSVQVVDENDNPPVFLFSQYSGSLSE 1779
>sp|Q8BNA6|FAT3_MOUSE Protocadherin Fat 3 OS=Mus musculus GN=Fat3 PE=1 SV=2
Length = 4555
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 56/156 (35%)
Query: 1 YELKLAASDNLKENYTTVVIH--VKDVNDNPPVFERPTYRTQITE--------------- 43
Y+L + ASD L V + V D+NDNPPVF++PTY T ++E
Sbjct: 2253 YKLTVRASDALTGARAEVTVDLLVDDINDNPPVFDQPTYNTTLSESSLIGTPVLQLVSTD 2312
Query: 44 ----------------------------EDDRTLPKRVLQYELT------LVASD----S 65
L R+L +EL + A+D S
Sbjct: 2313 ADSGNNKLVRYQIVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHCTLKVTATDNGFPS 2372
Query: 66 LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
L+ ++ V I+I+DVND PPVFN +Y + + E P
Sbjct: 2373 LS-SEVLVQIYISDVNDNPPVFNQLIYESYVSELAP 2407
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 52/136 (38%), Gaps = 50/136 (36%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITE-------------EDDRTLP------------ 50
TV I + DVNDNPP F + Y I+E ED + P
Sbjct: 3324 ATVSIDLTDVNDNPPRFSQDVYSAVISEDALEGDSVILLIAEDVDSKPNGQIRFSIVGGD 3383
Query: 51 ----------------------KRVLQYELTLVASDS---LNENKTTVVIHINDVNDMPP 85
+RV Y L + A DS + TTV I I+DVND P
Sbjct: 3384 RDNEFAVDPILGLVKVKKKLDRERVSGYSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSP 3443
Query: 86 VFNTSLYPAIMEEELP 101
VF + Y A+++E P
Sbjct: 3444 VFTPANYTAVIQENKP 3459
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 49/136 (36%), Gaps = 54/136 (39%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVL--------------------- 54
+V I V D+NDNPPVFER Y + E D +L +VL
Sbjct: 3219 ASVTITVLDINDNPPVFERRDYLVTVPE--DTSLGTQVLSVFATSKDIGTNAEITYLIRS 3276
Query: 55 ----------------------------QYELTLVASDSLN---ENKTTVVIHINDVNDM 83
++ L + A D TV I + DVND
Sbjct: 3277 GNEQGKFSINPKTGGISVLEALDYETCRRFYLVVEAKDGGTPALSTAATVSIDLTDVNDN 3336
Query: 84 PPVFNTSLYPAIMEEE 99
PP F+ +Y A++ E+
Sbjct: 3337 PPRFSQDVYSAVISED 3352
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 56/156 (35%), Gaps = 56/156 (35%)
Query: 1 YELKLAASDNLKENYTT-----VVIHVKDVNDNPPVFERPTYRTQITEED---------- 45
+ + ASD L E ++ V + V D+NDN PVF YR + E D
Sbjct: 2888 FSFFVVASD-LGEAFSLSSMALVSVKVTDINDNAPVFAHEVYRGNVKESDPPGEVVAVLS 2946
Query: 46 ----DRTLPKRVLQYELT------------------------------------LVASDS 65
D + R + Y +T + ASD
Sbjct: 2947 TLDKDTSNINRQVSYHITGGNPRGQFALGMVQSEWKVYVKRPLDREEQDIYFLNITASDG 3006
Query: 66 LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
L + V + ++DVND PV + Y A + E++P
Sbjct: 3007 LFVTQAMVEVTVSDVNDNSPVCDQVAYSASLPEDIP 3042
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 47/145 (32%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE---------------- 44
Y L + ASD L V + V DVNDN PV ++ Y + E+
Sbjct: 2997 YFLNITASDGLFVTQAMVEVTVSDVNDNSPVCDQVAYSASLPEDIPSNKIILKVSAKDAD 3056
Query: 45 --------------------------DDRTLP----KRVLQYELTLVASDSLNE-NKTTV 73
+ +TL +RV Y L A+D ++V
Sbjct: 3057 IGSNGDIRYSLYGSGNNEFFLDPESGELKTLAVLDRERVPVYNLIARATDGGGRFCSSSV 3116
Query: 74 VIHINDVNDMPPVFNTSLYPAIMEE 98
++ + DVND PPVF+++ Y A + E
Sbjct: 3117 LLLLEDVNDNPPVFSSNHYTACVYE 3141
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP-KRVLQYELT 59
Y + + +D T V I V D NDN P F +P Y I+E+ LP +LQ E
Sbjct: 1428 YNMSVEVTDGTNIAVTQVFIKVLDNNDNGPEFSQPHYDVTISED---VLPDTEILQIE-- 1482
Query: 60 LVASDSLNENKTTVVIH 76
A+D ++K + IH
Sbjct: 1483 --ATDRDEKHKLSYTIH 1497
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 4 KLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELTLVAS 63
KL SD + V I ++D ND+ P F+ Y T + E RV LT+ AS
Sbjct: 443 KLEVSDKEGDAKAQVTIGIEDANDHTPEFQEALYETFVNES------VRVGTNVLTVSAS 496
Query: 64 DSLNENKTTVVIHINDVNDMPPVFN 88
D + I +N +P N
Sbjct: 497 DKDKGENGYITYSIASLNLLPFAIN 521
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP-KRVLQYELTLVASDSLN-ENKTTV 73
+T++ VKD N N VF Y IT R L + Y+L + A++ + T+
Sbjct: 1698 STLIYEVKDGNING-VFTINPYSGVITTR--RALDYEHTSSYQLIIQATNMAGMASNATI 1754
Query: 74 VIHINDVNDMPPVFNTSLYPAIMEEELP 101
+ I D ND PPVF S Y + E P
Sbjct: 1755 SVQIVDENDNPPVFLFSQYSGSLSEAAP 1782
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 1 YELKLAAS---DNLKENYTTVV-IHVKDVNDNPPVFERPTYRTQITE 43
+ K+AA+ D + +T V + V D+NDN PVFE TY T I E
Sbjct: 2778 FHFKVAATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSTYETIIME 2824
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 12 KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYE 57
K ++ + ++V+D NDN PVF + +Y I E ++ ++Q E
Sbjct: 810 KSSWRLLTVNVEDANDNNPVFLQDSYSVSILES--SSIGTEIIQVE 853
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 12 KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQ 55
+ N V+++V+D ND+ P F P Y + E L VLQ
Sbjct: 1545 RRNLARVIVNVEDANDHSPYFTNPLYEASVFES--AALGSVVLQ 1586
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 15/22 (68%)
Query: 18 VVIHVKDVNDNPPVFERPTYRT 39
V I V DVNDNPPVF + + T
Sbjct: 1868 VNIEVTDVNDNPPVFTQAVFET 1889
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 1 YELKLAASDN---LKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYE 57
Y L + A D+ + TTV I + DVNDN PVF Y I E ++ + +LQ
Sbjct: 3411 YSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANYTAVIQE--NKPVGTSILQLV 3468
Query: 58 LT 59
+T
Sbjct: 3469 VT 3470
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 48 TLPKRVLQYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEEL 100
T+ K V + E+ SD + K V I I D ND P F +LY + E +
Sbjct: 436 TVKKEVYKLEV----SDKEGDAKAQVTIGIEDANDHTPEFQEALYETFVNESV 484
>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2
Length = 4981
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 55/149 (36%), Gaps = 48/149 (32%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYR---------------------- 38
Y L + A D L+ + + I + DVND+ P F RP Y
Sbjct: 1810 YSLLVRADDGLQSSDMRINITISDVNDHTPRFSRPVYSFDIPEDTTPGSLVAAILATDDD 1869
Query: 39 -------TQITEEDD-----------------RTLPKRVLQYELTLVASDSLNENKTTVV 74
+ + EEDD R L QY + V ++ TT+
Sbjct: 1870 SGVNGEISYVVEEDDGDGVFFLNLVTGVFNLTRALDYETQQYYILTVRAEDGGGQSTTIR 1929
Query: 75 IHIN--DVNDMPPVFNTSLYPAIMEEELP 101
+ N DVND PPVF+ S Y + E LP
Sbjct: 1930 AYFNILDVNDNPPVFSMSSYSTSLMENLP 1958
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 10/54 (18%)
Query: 1 YELKLAASDN----------LKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
Y L ++ SDN + + ++VI V D+ND+PPVFE+ YR ++EE
Sbjct: 434 YNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPPVFEQQVYRVNLSEE 487
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 65/164 (39%), Gaps = 54/164 (32%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITE-------------- 43
Y L + A+D + + T VV+ V D+NDN PVF + YR QI E
Sbjct: 2120 YSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENILTGTDIIQVSAA 2179
Query: 44 EDDRTLPKRVL---------------------------------QYELTLVASDSLNENK 70
++D +V Y LT+ A+D + +
Sbjct: 2180 DNDEGTNGQVRYGIVGGNTHQEFRIDSVTGAITVAKSLDRETTPAYTLTVQATDRGSSPR 2239
Query: 71 T---TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKL 111
T TV I + D+ND PVF S Y + E L G P ++L++
Sbjct: 2240 TDSCTVAITLLDMNDFVPVFELSPYSVNVPENL-GTLPRAILQV 2282
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 58/154 (37%)
Query: 1 YELKLAASDNLKENYTTVV---IHVKDVNDNPPVFERPTYRTQITEED------------ 45
Y++++ ASD ++ + ++V DVNDNPPVF++ +Y ++E +
Sbjct: 962 YQVEIVASDMGVPQLSSSILLTVYVHDVNDNPPVFDQISYEVTLSESEPVNSRFFKVQAS 1021
Query: 46 -------------------------------------DRTLPKRVLQYELTLVASDSLNE 68
DR L R Y L +VASD E
Sbjct: 1022 DKDSGANGEIAYTITDGNNGDAFGIFPDGQLYIKSELDRELQDR---YVLLVVASDRAVE 1078
Query: 69 ---NKTTVVIHINDVNDMPPVFNTSLYPAIMEEE 99
V + + DVND P+FN++ Y EEE
Sbjct: 1079 PLSATVNVTVLLEDVNDNRPLFNSTNYTFYFEEE 1112
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 11/65 (16%)
Query: 51 KRVLQYELTLVASDSLN----------ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEEL 100
+R+ Y LT+ SD+ + ++VI +ND+ND PPVF +Y + EE+
Sbjct: 429 ERIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPPVFEQQVYRVNLSEEV 488
Query: 101 -PGPY 104
PG Y
Sbjct: 489 PPGSY 493
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELT 59
Y ++++A D+ T V I V D+NDN P F RP+Y E + L RV Q T
Sbjct: 2843 YRIRVSAHDSGWTVSTDVTIFVTDINDNTPRFSRPSYYLDCPELPE--LGSRVTQVSAT 2899
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 48/149 (32%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITE--------------EDD 46
Y+LK+ AS T V I VKD+NDN P F + E + D
Sbjct: 862 YQLKIVASGGAVTGDTVVNITVKDLNDNAPHFLQAVESINAVENWQAGHSIFQAKAVDPD 921
Query: 47 RTLPKRVL-------------------------------QYELTLVASD-SLNENKTTVV 74
+ RVL Y++ +VASD + + ++++
Sbjct: 922 EGVNGRVLYSLKQNPKNLFTINEQNGNISLLGALDVHAGSYQVEIVASDMGVPQLSSSIL 981
Query: 75 --IHINDVNDMPPVFNTSLYPAIMEEELP 101
++++DVND PPVF+ Y + E P
Sbjct: 982 LTVYVHDVNDNPPVFDQISYEVTLSESEP 1010
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 12 KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQ 55
+ Y V + V+D+NDNPPVF Y+ + E D + VLQ
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE--DAVVGSSVLQ 271
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 40 QITEEDDRTLPKRVLQYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIM 96
+T E DR + V Y LT+VA+D + T VV+ + D+ND PVF ++Y +
Sbjct: 2107 HLTGELDR---EEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQI 2163
Query: 97 EEEL 100
+E +
Sbjct: 2164 KENI 2167
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 1 YELKLAASD--NLKE-NYTTVVIHVKDVNDNPPVFERPTY 37
Y+L++ A+D NL+ N V + V D DNPPVF + Y
Sbjct: 759 YQLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAY 798
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVF 32
Y+L + A D + + +VVI V+D NDNPP F
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSF 1420
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 56 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPY 104
Y+L +VA+D N N+ V + + D D PPVF+ + Y ++ E + Y
Sbjct: 759 YQLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFENVALGY 810
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 17 TVVIHVKDVNDNPPVFERPTYRTQITE 43
TV I V D ND PPVF TYR QI+E
Sbjct: 3392 TVNITVLDAND-PPVFSLSTYRVQISE 3417
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Query: 1 YELKLAASDN---LKENYTTVVIHVKDVNDNPPVF 32
+E+ ++A+D + Y ++ + V DVNDN PVF
Sbjct: 3162 HEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVF 3196
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 51/141 (36%)
Query: 18 VVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQ---------------------- 55
V I ++D+NDNPPVF PT +T E++ +++Q
Sbjct: 1726 VEITLQDINDNPPVF--PTDTLDLTVEENIGDGSKIMQLTAMDADEGANALVTYALISGA 1783
Query: 56 --------------------------YELTLVASDSLNENKTTVVIHINDVNDMPPVFNT 89
Y L + A D L + + I I+DVND P F+
Sbjct: 1784 DDSFRIDPESGDLIATKRLDREHRSKYSLLVRADDGLQSSDMRINITISDVNDHTPRFSR 1843
Query: 90 SLYPA-IMEEELPGPYPHSLL 109
+Y I E+ PG ++L
Sbjct: 1844 PVYSFDIPEDTTPGSLVAAIL 1864
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 51 KRVLQYELTLVASDSLNENKTT---VVIHINDVNDMPPVFNTSLYPAIMEEELPGPY 104
+++ YELT+ +SD + +++T V+I I D ND P F + ++ A + E P Y
Sbjct: 2736 EKISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPRF-SQIFSAYVSENSPLGY 2791
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 55 QYELTLVASDSLNENKTTVVIHIN----DVNDMPPVFNTSLYPAIMEEE 99
QY+L LV + E K + +N D+ND PPVF +S Y A + E+
Sbjct: 215 QYQL-LVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPED 262
>sp|Q8TDW7|FAT3_HUMAN Protocadherin Fat 3 OS=Homo sapiens GN=FAT3 PE=2 SV=2
Length = 4589
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 54/155 (34%)
Query: 1 YELKLAASDNLKENYTTVVIH--VKDVNDNPPVFERPTYRTQITE--------------- 43
Y+L + ASD L V + V DVNDNPP+F++PTY T ++E
Sbjct: 2254 YKLTIRASDALTGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLIGTPVLQVVSID 2313
Query: 44 ---EDDRT-------------------------LPKRVLQYELTLVASDSLN-------- 67
E+++ L R+L +EL + +
Sbjct: 2314 ADSENNKMVHYQIVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHCTLKVRSIDSGFPS 2373
Query: 68 -ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
++ V I+I+DVND PPVFN +Y + + E P
Sbjct: 2374 LSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAP 2408
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 58/156 (37%), Gaps = 56/156 (35%)
Query: 1 YELKLAASDNLKENYTT-----VVIHVKDVNDNPPVFERPTYRTQITEED---------- 45
+ + ASD L E ++ V + V D+NDN PVF + YR + E D
Sbjct: 2889 FTFSVVASD-LGEAFSLSSTALVSVRVTDINDNAPVFAQEVYRGNVKESDPPGEVVAVLS 2947
Query: 46 ----DRTLPKRVLQYELT------------------------------------LVASDS 65
D + R + Y +T + A+D
Sbjct: 2948 TWDRDTSDVNRQVSYHITGGNPRGRFALGLVQSEWKVYVKRPLDREEQDIYFLNITATDG 3007
Query: 66 LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
L + V + ++DVND PV + Y A++ E++P
Sbjct: 3008 LFVTQAMVEVSVSDVNDNSPVCDQVAYTALLPEDIP 3043
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 51/134 (38%), Gaps = 50/134 (37%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEEDD----------------------------- 46
TTV I V D+NDNPPVFER Y + E+
Sbjct: 3220 TTVTITVLDINDNPPVFERRDYLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGN 3279
Query: 47 -----RTLPK-------RVLQYELT------LVASDSLN---ENKTTVVIHINDVNDMPP 85
+ PK VL YEL + A D TV I++ DVND PP
Sbjct: 3280 EQGKFKINPKTGGISVSEVLDYELCKRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPP 3339
Query: 86 VFNTSLYPAIMEEE 99
F+ +Y A++ E+
Sbjct: 3340 KFSQDVYSAVISED 3353
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 52/136 (38%), Gaps = 50/136 (36%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITE-------------EDDRTLP------------ 50
TV I++ DVNDNPP F + Y I+E ED + P
Sbjct: 3325 ATVNINLTDVNDNPPKFSQDVYSAVISEDALVGDSVILLIAEDVDSQPNGQIHFSIVNGD 3384
Query: 51 ----------------------KRVLQYELTLVASDS---LNENKTTVVIHINDVNDMPP 85
+RV Y L + A DS + TV I I+DVND P
Sbjct: 3385 RDNEFTVDPVLGLVKVKKKLDRERVSGYSLLVQAVDSGIPAMSSTATVNIDISDVNDNSP 3444
Query: 86 VFNTSLYPAIMEEELP 101
VF + Y A+++E P
Sbjct: 3445 VFTPANYTAVIQENKP 3460
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP-KRVLQYELT 59
Y + + +D T V I V D NDN P F +P Y I+E+ LP +LQ E
Sbjct: 1429 YNMSVEVTDGTNVAVTQVFIKVLDNNDNGPEFSQPNYDVTISED---VLPDTEILQIE-- 1483
Query: 60 LVASDSLNENKTTVVIH 76
A+D ++K + +H
Sbjct: 1484 --ATDRDEKHKLSYTVH 1498
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 12 KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQ 55
+ N V+++V+D ND+ P F P Y + E L VLQ
Sbjct: 1546 RRNLARVIVNVEDANDHSPYFTNPLYEASVFES--AALGSAVLQ 1587
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 12 KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYE 57
K ++ + I+V+D NDN PVF + +Y I E + ++Q E
Sbjct: 811 KSSWRLLTINVEDANDNSPVFIQDSYSVNILESSG--IGTEIIQVE 854
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 1 YELKLAASDNLKENYTTVVIHV--KDVNDNPPVFERPTYRTQITE 43
Y L A+D + IH+ +DVNDNPPVF Y T + E
Sbjct: 3099 YSLMAKATDG-GGRFCQSNIHLILEDVNDNPPVFSSDHYNTCVYE 3142
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 15/22 (68%)
Query: 18 VVIHVKDVNDNPPVFERPTYRT 39
V I V DVNDNPPVF + + T
Sbjct: 1869 VNIEVTDVNDNPPVFTQAVFET 1890
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 1 YELKLAAS---DNLKENYTTVV-IHVKDVNDNPPVFERPTYRTQITE 43
+ K+AA+ D + +T V I V D+NDN PVFE +Y T I E
Sbjct: 2779 FHFKVAATIPLDKVDIVFTVDVDIKVLDLNDNKPVFETSSYDTIIME 2825
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 18 VVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELTLVASDSLNENKTTVVIHI 77
V I ++D ND+ P F++P Y + E ++P V LT+ ASD + I
Sbjct: 458 VTISIEDANDHTPEFQQPLYDAYVNE----SVP--VGTSVLTVSASDKDKGENGYITYSI 511
Query: 78 NDVNDMPPVFN 88
+N +P V N
Sbjct: 512 ASLNLLPFVIN 522
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 48 TLPKRVLQYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
T+ K V + E+T D K V I I D ND P F LY A + E +P
Sbjct: 437 TVKKEVYKLEVTNKEGDL----KAQVTISIEDANDHTPEFQQPLYDAYVNESVP 486
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Query: 3 LKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELTLVA 62
L ++ASD K + + +N P V + T TEE D + Y + A
Sbjct: 492 LTVSASDKDKGENGYITYSIASLNLLPFVINQFTGVISTTEELDFESSPEI--YRFIVRA 549
Query: 63 SDSLN----ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
SD + E++ V I I +VND P+F ++ + P
Sbjct: 550 SDWGSPYRHESEVNVTIRIGNVNDNSPLFEKVACQGVISYDFP 592
>sp|Q6V0I7|FAT4_HUMAN Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2
Length = 4981
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 56/149 (37%), Gaps = 48/149 (32%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYR---------------------- 38
Y L + A D L+ + + I V DVND+ P F RP Y
Sbjct: 1810 YSLLVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDD 1869
Query: 39 -------TQITEEDD-----------------RTLPKRVLQYELTLVASDSLNENKTTVV 74
T I EDD R L V QY + V ++ TT+
Sbjct: 1870 SGVNGEITYIVNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYILTVRAEDGGGQFTTIR 1929
Query: 75 IHIN--DVNDMPPVFNTSLYPAIMEEELP 101
++ N DVND PP+F+ + Y + E LP
Sbjct: 1930 VYFNILDVNDNPPIFSLNSYSTSLMENLP 1958
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 10/54 (18%)
Query: 1 YELKLAASDN----------LKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
Y L ++ SDN + + ++VI V D+ND+PPVF + YR ++EE
Sbjct: 434 YNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQVYRVNLSEE 487
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 11/65 (16%)
Query: 51 KRVLQYELTLVASDSLN----------ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEEL 100
+R+ Y LT+ SD+ + ++VI +ND+ND PPVF+ +Y + EE
Sbjct: 429 ERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQVYRVNLSEEA 488
Query: 101 -PGPY 104
PG Y
Sbjct: 489 PPGSY 493
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 59/154 (38%), Gaps = 58/154 (37%)
Query: 1 YELKLAASDNLKENYTTVVI---HVKDVNDNPPVFERPTYRTQITEED------------ 45
Y++++ ASD ++ VI +V DVNDN PVF++ +Y ++E +
Sbjct: 962 YQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQAS 1021
Query: 46 -------------------------------------DRTLPKRVLQYELTLVASDSLNE 68
DR L R Y L +VASD E
Sbjct: 1022 DKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKSELDRELQDR---YVLMVVASDRAVE 1078
Query: 69 ---NKTTVVIHINDVNDMPPVFNTSLYPAIMEEE 99
V + + DVND P+FN++ Y EEE
Sbjct: 1079 PLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEE 1112
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 12 KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQ 55
+ Y V + V+D+NDNPPVF Y+ + E D + VLQ
Sbjct: 230 RRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE--DAVVGSSVLQ 271
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVF 32
Y+L + A D + + +VVIHV+D NDNPP F
Sbjct: 1386 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSF 1420
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 64/164 (39%), Gaps = 54/164 (32%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITE-------------- 43
Y L + A+D + + T VV+ V D+NDN P+F + Y+ +I E
Sbjct: 2120 YTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAA 2179
Query: 44 EDDRTLPKRVL---------------------------------QYELTLVASDSLNENK 70
+ D +V Y LT+ A+D + +
Sbjct: 2180 DGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQATDRGSTPR 2239
Query: 71 T---TVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKL 111
T TV I + D+ND PVF S Y + E L G P ++L++
Sbjct: 2240 TDTSTVSIVLLDINDFVPVFELSPYSVNVPENL-GTLPRTILQV 2282
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTY 37
Y ++++A D+ T V I V D+NDN P F R +Y
Sbjct: 2841 YRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRTSY 2877
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 40 QITEEDDRTLPKRVLQYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPA-I 95
++T E DR + V Y LT+VA+D + T VV+ + D+ND P+F +LY I
Sbjct: 2107 RLTGELDR---EEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEI 2163
Query: 96 MEEELPG 102
E L G
Sbjct: 2164 NENTLTG 2170
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 1 YELKLAASD--NLKE-NYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYE 57
Y+L++ A+D NL+ N V I V D DNPPVF + Y + E L Y
Sbjct: 759 YQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFE-------NVALGYH 811
Query: 58 LTLVASDSLNENK 70
+ V++ +++ N
Sbjct: 812 VGSVSASTMDLNS 824
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 51 KRVLQYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLL 109
+R +Y L + A D L + + I ++DVND P F+ +Y I E+ +PG ++L
Sbjct: 1805 ERRSKYSLLVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAIL 1864
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 29/105 (27%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQI-------------TEEDDRTLPKRVLQYELT--- 59
T+V++ V DVNDNPP F+ Y T I T D P L Y L+
Sbjct: 2450 TSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYSLSGRN 2509
Query: 60 ------------LVASDSLN-ENKTTVVIHINDVNDMPPVFNTSL 91
++A+ LN ++ T +H+ D P +T++
Sbjct: 2510 SEKFHIDPLRGAIMAAGPLNGASEVTFSVHVKDGGSFPKTDSTTV 2554
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVF 32
Y+LK+ AS T V I VKD+NDN P F
Sbjct: 862 YQLKVVASGGTVTGDTMVNITVKDLNDNSPHF 893
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 56 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPY 104
Y+L +VA+D N N+ V I + D D PPVF+ Y ++ E + Y
Sbjct: 759 YQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGY 810
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Query: 1 YELKLAASDN---LKENYTTVVIHVKDVNDNPPVF 32
+E+ ++A D + Y +V ++V DVNDN PVF
Sbjct: 3160 HEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVF 3194
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 13 ENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
++ TV +++KD+NDN P F + Y+ I+E
Sbjct: 1191 KDQATVHVYMKDINDNAPKFLKDFYQATISES 1222
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 55 QYELTLVASDSLNENKTTVVIHIN----DVNDMPPVFNTSLYPAIMEEE 99
QY+L LV + E K + +N D+ND PPVF +S Y A + E+
Sbjct: 215 QYQL-LVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPED 262
>sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2
Length = 4588
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 68/164 (41%), Gaps = 55/164 (33%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITEE------------D 45
Y L + A+D + TV ++V D+NDN PVF + TY T I+E+ D
Sbjct: 3301 YYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMAD 3360
Query: 46 DRTLPKR-----------------------------------VLQYELTLVASDSLNE-- 68
D P + Y LT+ ASD+ +
Sbjct: 3361 DADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRETISGYTLTVQASDNGSPPR 3420
Query: 69 -NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKL 111
N TTV I ++DVND PVF+ Y I++E P + S+L+L
Sbjct: 3421 VNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKPVGF--SVLQL 3462
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Query: 1 YELKLAASDNLKEN---YTTVVIHV--KDVNDNPPVFERPTYRTQITEE 44
+ LK+ A D +E ++TVV+ V +DVNDNPP F P YR ++ E+
Sbjct: 891 HSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVRED 939
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 57/155 (36%), Gaps = 54/155 (34%)
Query: 1 YELKLAASDNLKENYTTVVIH--VKDVNDNPPVFERPTYRTQITEE-------------D 45
Y+L + A+D+L + V + V D+NDNPPVF + +Y ++E D
Sbjct: 2250 YKLSIRATDSLTGAHAEVFVDIIVDDINDNPPVFAQQSYAVTLSEASVIGTSVVQVRATD 2309
Query: 46 DRTLPKRVLQYELTLVASDSLN-------------------------------------- 67
+ P R + Y++ S S +
Sbjct: 2310 SDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPT 2369
Query: 68 -ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
+ V + + D+ND PP+F +Y A + E P
Sbjct: 2370 LSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAP 2404
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEE--DDRTLPKRVLQYELTLVASDSLNENKTTV 73
++VV +KD N P T IT++ D TLP L + T +A S N TTV
Sbjct: 1695 SSVVYEIKDGNTGDAFDINPHSGTIITQKALDFETLPIYTLIIQGTNMAGLSTN---TTV 1751
Query: 74 VIHINDVNDMPPVFNTSLYPAIMEE 98
++H+ D ND PVF + Y ++ E
Sbjct: 1752 LVHLQDENDNAPVFMQAEYTGLISE 1776
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 61/157 (38%), Gaps = 55/157 (35%)
Query: 1 YELKLAASDN---LKENYTTVV-IHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQ- 55
Y++K+ ASD+ ++ + T +V + V DVND+PP F Y+ ++E+D + +L
Sbjct: 2883 YQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPQGGVIAILST 2942
Query: 56 -------------------------------------------------YELTLVASDSL 66
Y LT+ A+D
Sbjct: 2943 TDADSEEINRQVTYFITGGDPLGQFAVETIQNEWKVYVKKPLDREKRDNYLLTITATDGT 3002
Query: 67 NENKTTVVIHINDVNDMPPVFNTSLYP-AIMEEELPG 102
+K V + + D ND PV +LY I E+ LPG
Sbjct: 3003 FSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDVLPG 3039
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 59/153 (38%), Gaps = 54/153 (35%)
Query: 1 YELKLAASD-NLKENYT---TVVIHVKDVNDNPPVFERPTYRTQITEE------------ 44
Y L L A D L T TV++ V D+NDNPPVFE Y ++E+
Sbjct: 3195 YTLSLKAVDQGLPRRLTATGTVIVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYA 3254
Query: 45 --------------------------DDRTLPKRVL---------QYELTLVASDSLN-- 67
D +T ++ +Y LT+ A+D
Sbjct: 3255 ASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPS 3314
Query: 68 -ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEE 99
+ TV +++ D+ND PVF+ Y ++ E+
Sbjct: 3315 LSDVATVNVNVTDINDNTPVFSQDTYTTVISED 3347
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 15/70 (21%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEE--------DDRTLPKRVLQYELTLVASDSLN 67
TTV++H++D NDN PVF + Y I+E DR +P L + A+D+
Sbjct: 1749 TTVLVHLQDENDNAPVFMQAEYTGLISESASINSVVLTDRNVP-------LVIRAADADK 1801
Query: 68 ENKTTVVIHI 77
++ +V HI
Sbjct: 1802 DSNALLVYHI 1811
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 27 DNPPVFERPTYRTQITEEDDRTLPKRVLQYELTLVASDSLNENKTT----VVIHINDVND 82
D V +R + R ++ + D K Y+ +++A + ++++ V I + D ND
Sbjct: 2748 DESFVIDRQSGRLKLEKSLDHETTK---WYQFSILARCTQDDHEMVASVDVSIQVKDAND 2804
Query: 83 MPPVFNTSLYPAIMEEELPG 102
PVF +S Y A + E LPG
Sbjct: 2805 NSPVFESSPYEAFIVENLPG 2824
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 49/142 (34%), Gaps = 62/142 (43%)
Query: 18 VVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP--KRVLQ-------------------- 55
V I VKD NDN PVFE Y I E LP RV+Q
Sbjct: 2795 VSIQVKDANDNSPVFESSPYEAFIVE----NLPGGSRVIQIRASDADSGTNGQVMYSLDQ 2850
Query: 56 --------------------------------YELTLVASD---SLNENKTTVV-IHIND 79
Y++ +VASD + + T +V + + D
Sbjct: 2851 SQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTD 2910
Query: 80 VNDMPPVFNTSLYPAIMEEELP 101
VND PP F +Y + E+ P
Sbjct: 2911 VNDSPPRFTAEIYKGTVSEDDP 2932
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 47/133 (35%), Gaps = 45/133 (33%)
Query: 11 LKENYTTVVIHVKDVNDNPPVFERPTYRTQI---------------TEEDDRTLPKRVL- 54
E V +HV D+ND PPVF +P Y + T+ D + +
Sbjct: 1858 FAEYAANVTVHVIDINDCPPVFAKPLYEASLLLPTYKGVKVITVNATDADSSAFSQLIYS 1917
Query: 55 -----------------------------QYELTLVASDSLNENKTTVVIHINDVNDMPP 85
+YELT+ ASD T+V I++ + +
Sbjct: 1918 ITEGNIGEKFSMDYKTGALTVQNTTQLRSRYELTVRASDGRFAGLTSVKINVKESKESHL 1977
Query: 86 VFNTSLYPAIMEE 98
F +Y A+++E
Sbjct: 1978 KFTQDVYSAVVKE 1990
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 11 LKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
+K N+ +V++V D ND+ P F +Y+ ++ E
Sbjct: 1541 VKRNFARIVVNVSDTNDHAPWFTASSYKGRVYE 1573
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 56 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEE 99
Y LT+ A+D T V I + D ND P F+TS Y ++ E+
Sbjct: 1425 YNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPED 1468
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELTL 60
Y L + A+D + V + V D NDN PV E+ Y I E+ LP +++ + +
Sbjct: 2992 YLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPED---VLPGKLI---MQI 3045
Query: 61 VASDS 65
A+D+
Sbjct: 3046 SATDA 3050
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 14/55 (25%)
Query: 46 DRTLPKRVLQYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEEL 100
D+ LP+R LT TV++ + D+ND PPVF Y A + E++
Sbjct: 3203 DQGLPRR-----LTATG---------TVIVSVLDINDNPPVFEYREYGATVSEDI 3243
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 22 VKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELT 59
V D NDNPP F + +Y +++E D+ + ++Q E T
Sbjct: 812 VVDANDNPPEFLQESYFVEVSE--DKEVHSEIIQVEAT 847
>sp|Q19319|CADH4_CAEEL Cadherin-4 OS=Caenorhabditis elegans GN=cdh-4 PE=1 SV=3
Length = 4292
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELTL 60
+ L + ASD E+ T+++ V D NDN P FE+ TY ++ E + + YEL
Sbjct: 3046 FNLTVVASDGEFEDKATILVTVIDQNDNAPTFEKSTYSMKVMESES-------IGYELAH 3098
Query: 61 VASDSLNENKT 71
+ ++N+T
Sbjct: 3099 FRASGGDQNET 3109
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 56 YELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYP-AIMEEELPG 102
+ LT+VASD E+K T+++ + D ND P F S Y +ME E G
Sbjct: 3046 FNLTVVASDGEFEDKATILVTVIDQNDNAPTFEKSTYSMKVMESESIG 3093
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 1 YELKLAASD-NLKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y++ L D + ++T+ + V D+ND PP F P Y T I+E
Sbjct: 2437 YQIPLVVEDATGRRAFSTLTLSVIDINDKPPFFVLPFYSTSISE 2480
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEE 44
TTV + + DVNDN P F R I+E+
Sbjct: 2660 TTVTVDIGDVNDNAPAFHGDYERFTISED 2688
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 2 ELKLAASDN---LKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
+LK++A D +K + T+ + +KDVN++ P F+ +Y +I+E
Sbjct: 687 QLKVSAIDAGTPVKSSVKTMKLRIKDVNNHSPQFDEVSYYLRISE 731
>sp|Q9NYQ6|CELR1_HUMAN Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens
GN=CELSR1 PE=1 SV=1
Length = 3014
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 47/125 (37%), Gaps = 47/125 (37%)
Query: 24 DVNDNPPVFERPTYRTQITEE------------DDR------------------------ 47
DVNDN PVF +PTY ++ E+ DR
Sbjct: 679 DVNDNDPVFTQPTYELRLNEDAAVGSSVLTLQARDRDANSVITYQLTGGNTRNRFALSSQ 738
Query: 48 --------TLP---KRVLQYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIM 96
LP K+ QY L + ASD + V+I++ D N PVF +S Y +
Sbjct: 739 RGGGLITLALPLDYKQEQQYVLAVTASDGTRSHTAHVLINVTDANTHRPVFQSSHYTVSV 798
Query: 97 EEELP 101
E+ P
Sbjct: 799 SEDRP 803
Score = 33.5 bits (75), Expect = 0.38, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
Y L + ASD + + V+I+V D N + PVF+ Y ++E+
Sbjct: 758 YVLAVTASDGTRSHTAHVLINVTDANTHRPVFQSSHYTVSVSED 801
Score = 33.5 bits (75), Expect = 0.45, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 8/50 (16%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYE-LTLVASD 64
T + + VKD ND+ PVFE+ YR ++ E + + YE LT+ ASD
Sbjct: 337 TYITVLVKDTNDHSPVFEQSEYRERVRENLE-------VGYEVLTIRASD 379
Score = 32.7 bits (73), Expect = 0.72, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 53 VLQYELTLVASDS----LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYP 105
V +Y L++ A D L + V + + DVND P+F +S + A + E +P YP
Sbjct: 527 VQKYSLSIKAQDGGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYP 583
Score = 28.9 bits (63), Expect = 9.0, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 1 YELKLAASDN---LKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
Y L + A DN K + TT+ I + D NDN P F Y+ I E+
Sbjct: 858 YTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFED 904
>sp|Q6V1P9|PCD23_HUMAN Protocadherin-23 OS=Homo sapiens GN=DCHS2 PE=2 SV=1
Length = 2916
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 56/156 (35%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVL--- 54
Y L + A+D N T + + V D+NDN P F P+ +ITE+ +LP ++
Sbjct: 1858 YSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAF-LPSEAVEITED---SLPGVIVTHV 1913
Query: 55 ----------------------------------------------QYELTLVASDSLNE 68
+YEL + SDS++
Sbjct: 1914 SVHDVDLNSAFIFSFAKESNPGTKFAIDQNTGVVVLVKTLDFEEMTEYELLIQISDSVHY 1973
Query: 69 NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPY 104
+ +V+ + DVND PPVF+ Y + E +P Y
Sbjct: 1974 TEGALVVRVLDVNDNPPVFSQDFYQVTVPESIPVGY 2009
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 50/151 (33%)
Query: 2 ELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEED--------------DR 47
+L + A + Y V + ++D NDN P FE+ Y+ ++E D
Sbjct: 1757 QLIVLAESSGHRAYCKVAVLIQDENDNSPCFEQSIYQASVSESQLYNAHVIQVFATDLDS 1816
Query: 48 TL---------------------------PKRVLQYELT------LVASDSLN---ENKT 71
L K +L YELT + A+D N T
Sbjct: 1817 GLNGLIEYSILSGNQEEAFQIDALSGVITTKAILDYELTSSYSLIVQATDKGMPRLSNTT 1876
Query: 72 TVVIHINDVNDMPPVFNTSLYPAIMEEELPG 102
+ + + D+ND P F S I E+ LPG
Sbjct: 1877 VIKVQVTDINDNAPAFLPSEAVEITEDSLPG 1907
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 52/153 (33%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITEE------------D 45
+EL + ASD+ + + I V DVNDNPP F +Y T + E +
Sbjct: 2176 HELVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSAN 2235
Query: 46 DRTLP-----------------------------------KRVLQYELTLVASDSLNENK 70
DR +++ ++ LT+ ASD+ ++
Sbjct: 2236 DRDTGSHAEIIYNIISGNEKGHFYLEENTGVLYLIKPLDYEKMTKFTLTVQASDAEKKHF 2295
Query: 71 TTVVIHIN--DVNDMPPVFNTSLYPAIMEEELP 101
+ V+ ++ D ND P F S + I+ E LP
Sbjct: 2296 SFAVVFVSVLDDNDHAPQFMFSSFSCIVPENLP 2328
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 18 VVIHVKDVNDNPPVFERPTYRTQITEE 44
V + ++DVNDN PVF TY T I++E
Sbjct: 163 VRVDLEDVNDNHPVFNPSTYVTSISDE 189
Score = 28.9 bits (63), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 55 QYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPY 104
Q+ LT++A D + T+ + + DVND PVF LY A + E + PG +
Sbjct: 1234 QHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKENQNPGEF 1287
>sp|O35161|CELR1_MOUSE Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus
GN=Celsr1 PE=2 SV=3
Length = 3034
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 49/132 (37%), Gaps = 47/132 (35%)
Query: 17 TVVIHVKDVNDNPPVFERPTYRTQITEE------------DDR----------------- 47
+V I V DVNDN P+F +P Y ++ E+ DR
Sbjct: 687 SVSITVLDVNDNDPMFTQPVYELRLNEDAAVGSSVLTLRARDRDANSVITYQLTGGNTRN 746
Query: 48 ---------------TLP---KRVLQYELTLVASDSLNENKTTVVIHINDVNDMPPVFNT 89
LP K+ QY L + ASD + V I++ D N PVF +
Sbjct: 747 RFALSSQSGGGLITLALPLDYKQERQYVLAVTASDGTRSHTAQVFINVTDANTHRPVFQS 806
Query: 90 SLYPAIMEEELP 101
S Y + E+ P
Sbjct: 807 SHYTVSVSEDRP 818
Score = 33.1 bits (74), Expect = 0.46, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
Y L + ASD + + V I+V D N + PVF+ Y ++E+
Sbjct: 773 YVLAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSED 816
Score = 32.3 bits (72), Expect = 0.90, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 3 LKLAASDN---LKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
LK++A D+ + T + + V D ND+ PVFE+ YR +I E
Sbjct: 336 LKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERIRE 379
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 1 YELKLAASDN---LKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
Y L + A DN K + T++ I + D NDN P F R Y+ + E+
Sbjct: 873 YTLAITAQDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFED 919
Score = 28.9 bits (63), Expect = 8.7, Method: Composition-based stats.
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 18 VVIHVKDVNDNPPVFER 34
+ + V D+NDNPPVFE+
Sbjct: 1000 IQVSVLDINDNPPVFEK 1016
>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft
PE=1 SV=3
Length = 5147
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 53 VLQYELTLVASDSLNENKTT---VVIHINDVNDMPPVFNTSLYPAIMEEELP 101
+ +Y LT+VA D +TT ++I +NDVND PVF S Y A++ E P
Sbjct: 457 IGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAP 508
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDR 47
YEL++ SD ++ I V D NDNPP+FE Y I E R
Sbjct: 1891 YELRIRVSDGVQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQR 1937
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 14/72 (19%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYR-------------TQITEED-D 46
Y LK+ ASD T + I ++D NDN P FE Y QI D D
Sbjct: 2982 YILKVVASDGAWRAETPITITIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDRD 3041
Query: 47 RTLPKRVLQYEL 58
+ P V+ Y L
Sbjct: 3042 KQGPNSVISYSL 3053
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNL---KENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y+L ++A D + Y V + + DVNDNPP+F+ Y + E
Sbjct: 236 YQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNE 281
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 55 QYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
+Y LTLVA D+ + V + + D+ND PVF Y A + E LP
Sbjct: 2456 EYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVRENLP 2505
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 17 TVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELTLVASDSLNENKTTVVIH 76
+V + D +D + E T + + + DR + YEL + SD + + I
Sbjct: 1855 SVTFLLMDGHDGKFLLEPSTGKLILNDTLDRETKSK---YELRIRVSDGVQYTEAYATIQ 1911
Query: 77 INDVNDMPPVFNTSLY 92
++D ND PP+F ++Y
Sbjct: 1912 VSDTNDNPPLFEDTVY 1927
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITEED 45
YE+ + A+D + T + ++V D NDN PV E+ Y ++ EE+
Sbjct: 2776 YEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNAEVLEEE 2823
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLKENYTT---VVIHVKDVNDNPPVFERPTYRTQITE 43
Y L + A D TT ++I V DVND+ PVFE+ Y ++E
Sbjct: 460 YNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSE 505
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 21/104 (20%)
Query: 1 YELKLAASDNL----KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQY 56
Y L L A D+ + + + I V DVNDN P F+ TY + P+R+ +
Sbjct: 2561 YHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAV--------PERISKG 2612
Query: 57 ELTLVASD-SLNENKTTVV--------IHINDVNDMPPVFNTSL 91
E A L++ + VV H D+N V +T L
Sbjct: 2613 EFVFGARALDLDDGENAVVHYTISGRDQHYFDINTKTGVVSTKL 2656
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 55 QYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLY 92
+Y L +VASD +T + I I D ND P F S Y
Sbjct: 2981 EYILKVVASDGAWRAETPITITIQDQNDNAPEFEHSFY 3018
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y L L A D V + V+D+NDN PVFE +Y + E
Sbjct: 2457 YTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATVRE 2502
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLKENYTTVVIH---VKDVNDNPPVFERPTYRTQITE 43
Y L + ASD + +T V++ V D NDNPP+F QI E
Sbjct: 1455 YTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKE 1500
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLKENYTTVV---IHVKDVNDNPPVFERPTYRTQITE 43
Y L + A DN + + +T + +V D+NDN P+F+ +Y +++ E
Sbjct: 1993 YILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFE 2038
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 49/133 (36%), Gaps = 47/133 (35%)
Query: 17 TVVIHVKDVNDNPPVFERPTYRTQITEED------------DR----------------- 47
+V + V DVNDN P F +P Y ++ E+ DR
Sbjct: 595 SVSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAVDRDAHSVITYQITSGNTRN 654
Query: 48 ---------------TLP---KRVLQYELTLVASDSLNENKTTVVIHINDVNDMPPVFNT 89
LP K QY L + ASD ++ +V+++ D N PVF +
Sbjct: 655 RFSITSQSGGGLVSLALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQS 714
Query: 90 SLYPAIMEEELPG 102
S Y + E+ P
Sbjct: 715 SHYTVNVNEDRPA 727
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 54/155 (34%), Gaps = 54/155 (34%)
Query: 1 YELKLAASDN---LKENYTTVVIHVKDVNDNPPVFERPTYRTQI---------------T 42
Y L + A DN K + T + I V DVNDN P F R +Y+ + T
Sbjct: 781 YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISAT 840
Query: 43 EEDD-----------------------------RTLPK----RVLQYELTLVASDSLNEN 69
+ D RTL + V QY L A D
Sbjct: 841 DRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDKGMPP 900
Query: 70 KTT---VVIHINDVNDMPPVFNTSLYPAIMEEELP 101
T V + + DVND PPVF + +EE P
Sbjct: 901 ARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSP 935
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
Y L + ASD +++ +V++V D N + PVF+ Y + E+
Sbjct: 681 YVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNED 724
Score = 29.3 bits (64), Expect = 7.4, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 1 YELKLAASDNLKE-----NYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
Y+L + ASD ++ V + V+D NDN P F Y Q+ E+
Sbjct: 363 YQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVRED 411
>sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster GN=ds PE=1 SV=3
Length = 3503
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 17 TVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELTLVASDSLNENKTTVVIH 76
T+++ V+DVNDNPPVFE+ Y ++E R++ +++Q ASD N +
Sbjct: 968 TILVDVQDVNDNPPVFEKDEYSVNVSES--RSINAQIIQVN----ASDLDTGNNARITYR 1021
Query: 77 INDVN 81
I D
Sbjct: 1022 IVDAG 1026
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 56/146 (38%), Gaps = 52/146 (35%)
Query: 1 YELKLAASDNLKENYT---TVVIHVKDVNDNPPVF------------ERPTYRTQITEED 45
Y+LK+ A+D T T+ + + DVNDN P F E T I+ D
Sbjct: 2341 YKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNLVTVSEATELGAVITSISAND 2400
Query: 46 ---------------------------DRTLPKRVL----------QYELTLVASDSLNE 68
DR K VL +YEL ++ASD+ +E
Sbjct: 2401 VDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAHE 2460
Query: 69 NKTTVVIHINDVNDMPPVFNTSLYPA 94
+T + + +ND ND PVF PA
Sbjct: 2461 ARTVLTVRVNDENDNAPVFLAQQPPA 2486
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVF---ERPTYRTQITEEDDRTLPKRVLQYE 57
YEL + ASD E T + + V D NDN PVF + P Y + + + V
Sbjct: 2448 YELDVIASDAAHEARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDL 2507
Query: 58 LTLVASDSLNENKTTVVIHI 77
LT+ A+D+ +E + VI+I
Sbjct: 2508 LTVNATDADSEGNNSKVIYI 2527
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 53 VLQYELTLVASDS----LNENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPG 102
V Y L++VA+D L+ +K+ + + I DVND PP F LY A +ME PG
Sbjct: 414 VSNYTLSVVATDKGTPPLHASKS-IFLRITDVNDNPPEFEQDLYHANVMEVADPG 467
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 51/137 (37%), Gaps = 52/137 (37%)
Query: 17 TVVIHVKDVNDNPPVFERPTYRTQITE--------------EDDRTL-----------PK 51
++ + + DVNDNPP FE+ Y + E + D L P+
Sbjct: 436 SIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPE 495
Query: 52 RVLQY------------------------ELTLVASDSLN---ENKTTVVIHINDVNDMP 84
Q+ +LT+VA D + TV++ I+DVND
Sbjct: 496 THAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNE 555
Query: 85 PVFNTSLYPAIMEEELP 101
P+F+ S Y + E P
Sbjct: 556 PIFDQSFYNVSVAENEP 572
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDN---LKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y+L + A+DN T V++ V D NDN P F++ Y +I E
Sbjct: 1066 YQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEE 1111
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 55 QYELTLVASDS---LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEEL 100
+Y+LT++A+D+ KT V++ + D ND P F S Y +EE L
Sbjct: 1065 RYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENL 1113
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 18 VVIHVKDVNDNPPVFERPT-YRTQITEEDDRTLPKRVLQYELTLVASDSLNENKTTVVIH 76
V+I + D NDN P+F+R Y +I+E P R +L + +D N + VV
Sbjct: 2685 VIITILDANDNFPIFDRSAKYEAEISE----LAPLRYSIAQLQAIDADQENTPNSEVVYD 2740
Query: 77 INDVND 82
I ND
Sbjct: 2741 ITSGND 2746
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 1 YELKLAASDNL----KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQ 55
Y L++ ASD ++ + + I V+D NDN P F+ Y + E D L V+Q
Sbjct: 1864 YTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQE--DAPLGTSVVQ 1920
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 14 NYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQ 55
+ TV I ++DVNDN P+F + Y + E + T+ VLQ
Sbjct: 215 GFMTVNITIQDVNDNQPIFNQSRYFATVPE--NATVGTSVLQ 254
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITE 43
TV++ + DVNDN P+F++ Y + E
Sbjct: 542 ATVLVTIHDVNDNEPIFDQSFYNVSVAE 569
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 14 NYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP 50
+T V I V+DVNDN P FE R + E + P
Sbjct: 860 GHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAP 896
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 18 VVIHVKDVNDNPPVFERPTYRTQI 41
V I+V D+NDN P+FER Y Q+
Sbjct: 1990 VQINVLDINDNRPIFERYPYIGQV 2013
>sp|Q9H251|CAD23_HUMAN Cadherin-23 OS=Homo sapiens GN=CDH23 PE=1 SV=2
Length = 3354
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 42 TEEDDRTLPKRVLQYELTLVASDSLNENKT---TVVIHINDVNDMPPVFNTSLYPAIMEE 98
T E DR +R+ +Y+L +VASD+ K+ T+ IH+ DVND P F ++Y + E
Sbjct: 950 TTELDR---ERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSE 1006
Query: 99 ELP 101
++P
Sbjct: 1007 DVP 1009
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 1 YELKLAASDN---LKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
Y+L++ ASD K + +T+ IHV DVND P F Y ++E+
Sbjct: 961 YQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSED 1007
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 8 SDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
+ N +EN VVI V DVND P F +P + T + E
Sbjct: 2485 ASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSVYE 2520
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 1 YELKLAASDN------LKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVL 54
Y+L ++ DN + +Y ++I + D NDN P+F + TY+ ++ E P VL
Sbjct: 1922 YKLTISVKDNPENPRIARRDYDLLLIFLSDENDNHPLFTKSTYQAEVMENSPAGTPLTVL 1981
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 55/149 (36%), Gaps = 48/149 (32%)
Query: 1 YELKLAASDNLKE--NYTTVVIHVKDVNDNPPVFERPTYRTQI---------------TE 43
Y+ L A++++ + Y V I + + NDN P+F +P Y + T+
Sbjct: 427 YDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNISLYENVTVGTSVLTVLATD 486
Query: 44 EDDRTL----------PKR--------------------VLQYELTLVASDSLNENKTTV 73
D T P R + ++ LT++A D E T
Sbjct: 487 NDAGTFGEVSYFFSDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTIIARDGGGEETTGR 546
Query: 74 V-IHINDVNDMPPVFNTSLYPAIMEEELP 101
V I++ DVND P F Y + E P
Sbjct: 547 VRINVLDVNDNVPTFQKDAYVGALRENEP 575
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 18 VVIHVKDVNDNPPVFERPTYRTQITE 43
V I V D NDNPP F +P Y + E
Sbjct: 657 VTIEVFDENDNPPTFSKPAYFVSVVE 682
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 18 VVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELTLVASDSLN 67
V + + D+NDN P+F++P+Y+ + E+ +P + +T +DS N
Sbjct: 2388 VYLEIVDINDNNPIFDQPSYQEAVFED----VPVGTIILTVTATDADSGN 2433
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 69 NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKL 111
TV + + DVND P+F S Y A + E++ P HS+L+L
Sbjct: 1084 GTATVFVTVLDVNDNRPIFLQSSYEASVPEDI--PEGHSILQL 1124
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 1 YELKLAASDN--LKENYT---TVVIHVKDVNDNPPVFERPTYRTQITEE 44
Y L L A DN + + +T TV + V DVNDN P+F + +Y + E+
Sbjct: 1066 YMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPED 1114
Score = 28.9 bits (63), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRT--QITEEDDRTLPKRVLQ 55
+ L + A+D + T +++ V DVNDN PVF RP T I EE +P R
Sbjct: 2577 FSLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTILHIREE----IPLRSNV 2632
Query: 56 YEL 58
YE+
Sbjct: 2633 YEV 2635
>sp|Q96JQ0|PCD16_HUMAN Protocadherin-16 OS=Homo sapiens GN=DCHS1 PE=2 SV=1
Length = 3298
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 55 QYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
+Y+L L+A D +E + + + + DVND P F+ SLY ++ E P
Sbjct: 2344 RYQLQLLAHDGPHEGRANLTVLVEDVNDNAPAFSQSLYQVMLLEHTP 2390
Score = 35.4 bits (80), Expect = 0.12, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y+L+L A D E + + V+DVNDN P F + Y+ + E
Sbjct: 2345 YQLQLLAHDGPHEGRANLTVLVEDVNDNAPAFSQSLYQVMLLE 2387
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQ 40
Y L++ A+D+ V+HV DVNDN P F+R YR +
Sbjct: 438 YNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRPE 480
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 56 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLY--PAIMEEELPGPY 104
Y L + A+DS + + V+H+ DVND P F+ LY + E LPG +
Sbjct: 438 YNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLPEVALPGSF 491
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 26 NDNPPVFERPTYRTQITEE 44
NDNPPVF R +YR + E+
Sbjct: 2596 NDNPPVFTRASYRVTVPED 2614
>sp|Q8VHR0|PCD18_MOUSE Protocadherin 18 OS=Mus musculus GN=Pcdh18 PE=1 SV=2
Length = 1134
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDN---LKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
YEL+L ASD + + + I + D NDN P FE+P+Y Q+ E
Sbjct: 212 YELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQPSYTIQLLE 257
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 55 QYELTLVASDSLNENKTTV---VIHINDVNDMPPVFNTSLYP-AIMEEELPGPY 104
+Y LT++A D + ++V + IND+ND PP F S Y I E PG Y
Sbjct: 430 EYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNSPGAY 483
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLKENYTTV---VIHVKDVNDNPPVFERPTYRTQITE 43
Y L + A D + ++V + + D+NDNPP F+R Y I+E
Sbjct: 431 YSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISE 476
>sp|A7MB46|PCD18_BOVIN Protocadherin-18 OS=Bos taurus GN=PCDH18 PE=2 SV=1
Length = 1134
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 55 QYELTLVASDSLNENKTTV---VIHINDVNDMPPVFNTSLYP-AIMEEELPGPY 104
+Y LT++A D + +TV + IND+ND PP F S Y AI E PG Y
Sbjct: 430 EYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFAISENNSPGAY 483
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDN---LKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
YEL+L ASD + + + I + D NDN P FE+ +Y Q+ E
Sbjct: 212 YELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSYIIQLLE 257
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLKENYTTV---VIHVKDVNDNPPVFERPTYRTQITE 43
Y L + A D + +TV + + D+NDNPP F+R Y I+E
Sbjct: 431 YSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFAISE 476
>sp|Q5DRC6|PCDB8_PANTR Protocadherin beta-8 OS=Pan troglodytes GN=PCDHB8 PE=3 SV=1
Length = 801
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 12 KENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
+ V I V DVNDN P FE+P YR QI+E+
Sbjct: 223 RSGTAQVYIEVVDVNDNAPEFEQPFYRVQISED 255
>sp|Q9UN66|PCDB8_HUMAN Protocadherin beta-8 OS=Homo sapiens GN=PCDHB8 PE=2 SV=3
Length = 801
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 12 KENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
+ V I V DVNDN P FE+P YR QI+E+
Sbjct: 223 RSGTAQVYIEVVDVNDNAPEFEQPFYRVQISED 255
>sp|P34616|CADH3_CAEEL Cadherin-3 OS=Caenorhabditis elegans GN=cdh-3 PE=2 SV=1
Length = 3343
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTY 37
Y +K+ +D T++ ++VKDVNDN P+FE+P Y
Sbjct: 2214 YRIKVKLTDGAWLIETSLFVNVKDVNDNAPIFEKPEY 2250
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITE 43
+ ++IHV D+NDN P FE +Y +I+E
Sbjct: 1740 SKILIHVGDINDNTPEFELSSYFIKISE 1767
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYEL--------TLVASDSLN 67
T I + D+NDN P F++ YR +TE L V+ ++ +V D+ +
Sbjct: 2029 TKATIKIVDINDNSPRFDQQLYRFNVTENSGPKLIGHVIARDIDRSSRVFYEIVGGDANH 2088
Query: 68 ENKTTVVIHINDVNDM 83
E T I V D+
Sbjct: 2089 EFMVTESGQIESVRDL 2104
>sp|Q5DRD6|PCDBD_PANTR Protocadherin beta-13 OS=Pan troglodytes GN=PCDHB13 PE=3 SV=1
Length = 798
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 12 KENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
+ V I V DVNDN P FE+P YR QI+E+
Sbjct: 223 RSGTAQVYIEVLDVNDNAPEFEQPFYRVQISED 255
>sp|Q9Y5F0|PCDBD_HUMAN Protocadherin beta-13 OS=Homo sapiens GN=PCDHB13 PE=2 SV=1
Length = 798
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 12 KENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
+ V I V DVNDN P FE+P YR QI+E+
Sbjct: 223 RSGTAQVYIEVLDVNDNAPEFEQPFYRVQISED 255
>sp|O88277|FAT2_RAT Protocadherin Fat 2 OS=Rattus norvegicus GN=Fat2 PE=1 SV=1
Length = 4351
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 55 QYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
QY+L + SL + TTV+I I D N+ PVFN S Y ++E +P
Sbjct: 428 QYQLHV--KTSLGQATTTVIIDIVDCNNHAPVFNRSSYEGTLDENIP 472
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 1 YELKLAASDNLKENYTTVV--IHVKDVNDNPPVFERPTYRTQITE 43
Y L++ S N+ +T VV +++ D NDNPP F +PT+ I+E
Sbjct: 1726 YRLRIRGS-NMAGVFTEVVALVYIIDENDNPPAFGKPTFLGHISE 1769
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITE 43
T VV++V D+NDNPP F P Y ++E
Sbjct: 2363 TLVVVNVSDINDNPPKFREPQYEANVSE 2390
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 1 YELKLAASDNLKE--NYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYEL 58
Y L + ASD E T VV+H+ D ND P+F P+YR I+E DR L + +
Sbjct: 115 YTLIVQASDKSLEFEALTQVVVHILDQNDLKPLFSPPSYRVTISE--DRPLKSPICKVTA 172
Query: 59 T 59
T
Sbjct: 173 T 173
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 1 YELKLAASDN----LKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y L+L A+D+ L E+ T V + V DVNDNPP F + Y T + E
Sbjct: 3394 YSLRLRATDSGQPPLHED-TEVAVEVVDVNDNPPRFFQLNYSTSVQE 3439
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 18 VVIHVKDVNDNPPVFERPTYRTQITE 43
V+IHV+DVND+PP F Y + E
Sbjct: 1858 VIIHVRDVNDSPPRFSEQIYEVAVVE 1883
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELTLVASDS-LNENKTTVV 74
TV + V+D+NDNPP F + Y T ++E P V+Q L+ASD +N+
Sbjct: 2256 ATVEVLVEDINDNPPTFSQLVYTTSVSEGSPAQTP--VIQ----LLASDQDSGQNQDVSY 2309
Query: 75 IHINDVNDMPPVF 87
+ D +D+ F
Sbjct: 2310 QIVEDGSDVSKFF 2322
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 17 TVVIHVKDVNDNPPVFERPTYRTQITE 43
+V I V+DVNDN PVFE Y+ +TE
Sbjct: 2784 SVSIQVEDVNDNRPVFEADPYKAFLTE 2810
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 73 VVIHINDVNDMPPVFNTSLYP-AIMEEELPG 102
V+IH+ DVND PP F+ +Y A++E PG
Sbjct: 1858 VIIHVRDVNDSPPRFSEQIYEVAVVEPIHPG 1888
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y+L + S L + TTV+I + D N++ PVF R +Y + E
Sbjct: 429 YQLHVKTS--LGQATTTVIIDIVDCNNHAPVFNRSSYEGTLDE 469
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 72 TVVIHINDVNDMPPVFNTSLYPAIMEEELPG 102
+V I + DVND PVF Y A + E +PG
Sbjct: 2784 SVSIQVEDVNDNRPVFEADPYKAFLTENMPG 2814
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYE 57
Y L++ DN + + VV+ + DVNDNPP+F + +++E P+ V +
Sbjct: 1208 YVLEVTVQDNGDPSLRSTSRVVVCILDVNDNPPMFSHKLFNVRLSERLSPLSPEPVYR-- 1265
Query: 58 LTLVASD 64
LVASD
Sbjct: 1266 --LVASD 1270
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 56 YELTLVASD-SLN-ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
Y L + ASD SL E T VV+HI D ND+ P+F+ Y + E+ P
Sbjct: 115 YTLIVQASDKSLEFEALTQVVVHILDQNDLKPLFSPPSYRVTISEDRP 162
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 47/137 (34%), Gaps = 54/137 (39%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYE-------------LTLVA 62
T V I V D+NDN P RP + + E D L VLQ E L +
Sbjct: 1121 TEVYIEVTDINDNIPSMSRPVFYPSVLE--DAPLGTSVLQLEAWDPDSSSQGKLTFNLTS 1178
Query: 63 SDSLN-------------------ENK--------------------TTVVIHINDVNDM 83
+ L ENK + VV+ I DVND
Sbjct: 1179 GNHLGHFIVHPFTGLLTTAKQLDRENKDEYVLEVTVQDNGDPSLRSTSRVVVCILDVNDN 1238
Query: 84 PPVFNTSLYPAIMEEEL 100
PP+F+ L+ + E L
Sbjct: 1239 PPMFSHKLFNVRLSERL 1255
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 12 KENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
K ++ + + VKD NDNPP F Y+ I+E+
Sbjct: 800 KSSWKLLTVTVKDWNDNPPRFPPGGYQLTISED 832
>sp|Q5F226|FAT2_MOUSE Protocadherin Fat 2 OS=Mus musculus GN=Fat2 PE=2 SV=1
Length = 4351
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 55 QYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
QY+L + SL + TTV+I I D N+ PVFN S Y ++E +P
Sbjct: 428 QYQLHV--KTSLGQATTTVIIDIVDCNNHAPVFNRSSYEGTLDENIP 472
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
+ +K+ A+D T VV++V D+NDNPP F P Y ++E
Sbjct: 2345 FRVKVRATDRGDPPLTGETLVVVNVSDINDNPPEFREPQYEANVSE 2390
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 1 YELKLAASDNLKE--NYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYEL 58
Y L + ASD E T VV+H+ D ND P+F P+YR I+E DR L + +
Sbjct: 115 YTLVVQASDKSLEFEALTQVVVHILDQNDLKPLFSPPSYRFTISE--DRPLKSPICKVTA 172
Query: 59 T 59
T
Sbjct: 173 T 173
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELTLVASDS-LNENKTTVV 74
TV + V+D+NDNPP F + Y T ++E P V+Q L+ASD +N+
Sbjct: 2256 ATVEVLVEDINDNPPTFSQLVYSTSVSEGSPAQTP--VIQ----LLASDQDSGQNQDVSY 2309
Query: 75 IHINDVNDMPPVF 87
+ D +D+ F
Sbjct: 2310 QIVEDGSDVSKFF 2322
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 18 VVIHVKDVNDNPPVFERPTYRTQITE 43
V+IHV+DVND+PP F Y + E
Sbjct: 1858 VIIHVRDVNDSPPRFSEQIYEVAVVE 1883
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 1 YELKLAASDN----LKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y L++ A+D+ L E+ T V + V DVNDNPP F + Y T + E
Sbjct: 3394 YSLRIRATDSGQPPLHED-TEVAVEVVDVNDNPPRFFQLNYSTAVQE 3439
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 73 VVIHINDVNDMPPVFNTSLYP-AIMEEELPG 102
V+IH+ DVND PP F+ +Y A++E PG
Sbjct: 1858 VIIHVRDVNDSPPRFSEQIYEVAVVEPIHPG 1888
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y+L + S L + TTV+I + D N++ PVF R +Y + E
Sbjct: 429 YQLHVKTS--LGQATTTVIIDIVDCNNHAPVFNRSSYEGTLDE 469
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 17 TVVIHVKDVNDNPPVFERPTYRTQITE 43
+V I V+DVNDN PVFE Y+ +TE
Sbjct: 2784 SVNIQVEDVNDNRPVFEADPYKAFLTE 2810
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 1 YELKLAASDNLKENYTTVV--IHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYE- 57
Y+LK+ S N+ +T VV +++ D NDN P F + T+ I+E L +L +
Sbjct: 1726 YQLKIRGS-NMAGVFTEVVALVYIIDENDNAPAFLKSTFVGHISEA--APLHSLILGEDN 1782
Query: 58 --LTLVASDSLNENKTTVVIHI 77
L + ASDS E + +V I
Sbjct: 1783 SPLVIRASDSDQEANSLLVYKI 1804
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 72 TVVIHINDVNDMPPVFNTSLYPAIMEEELPG 102
+V I + DVND PVF Y A + E +PG
Sbjct: 2784 SVNIQVEDVNDNRPVFEADPYKAFLTENMPG 2814
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 56 YELTLVASD-SLN-ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
Y L + ASD SL E T VV+HI D ND+ P+F+ Y + E+ P
Sbjct: 115 YTLVVQASDKSLEFEALTQVVVHILDQNDLKPLFSPPSYRFTISEDRP 162
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYE 57
T V I V D+NDN P RP + + E D L VLQ E
Sbjct: 1121 TEVYIEVTDINDNIPSMSRPVFYPSVKE--DAPLGTSVLQLE 1160
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 11 LKENYTTVVIHVKDVNDNPPVFERPTYRTQI 41
+K N+ V IHV+D N + P F +P Y +
Sbjct: 1534 IKRNFVWVTIHVEDGNLHSPHFTQPRYEANV 1564
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYE 57
Y L++ DN + + VV+ V DVNDN P+F + +++E P+ V +
Sbjct: 1208 YVLEVTVQDNGDPPLRSTSRVVVCVLDVNDNSPMFSHKLFNVRLSERLSPLSPEPVYR-- 1265
Query: 58 LTLVASD 64
LVASD
Sbjct: 1266 --LVASD 1270
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 51 KRVLQYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYP 105
K V T A S +E TV + + D+ND PP F+ +Y + E P P
Sbjct: 2238 KHVFTVRATDTALGSFSE--ATVEVLVEDINDNPPTFSQLVYSTSVSEGSPAQTP 2290
>sp|Q9Y5G5|PCDG8_HUMAN Protocadherin gamma-A8 OS=Homo sapiens GN=PCDHGA8 PE=2 SV=1
Length = 932
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 60/162 (37%), Gaps = 66/162 (40%)
Query: 1 YELKLAASDNLKE-NYTTVVIHVK--DVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYE 57
+ L L ASD K +TV IHV D NDN PVF P YR ++ E P L
Sbjct: 208 HHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVLEN---MPPGTRL--- 261
Query: 58 LTLVASD------------------------SLNEN------------------------ 69
LT+ ASD LNEN
Sbjct: 262 LTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQA 321
Query: 70 --------KTTVVIHINDVND-MPPVFNTSLYPAIMEEELPG 102
+T ++I + DVND P V TSL+ ++E LPG
Sbjct: 322 EDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPG 363
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEEDDR 47
T + +HV D+NDNPP F +Y I E + R
Sbjct: 436 TQIALHVADINDNPPTFPHASYSAYILENNLR 467
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 56 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSL 108
Y +T++ASD +T + +H+ D+ND PP F + Y A I+E L G SL
Sbjct: 418 YNITVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSL 474
>sp|P08641|CADH1_CHICK Cadherin-1 OS=Gallus gallus GN=CDH1 PE=1 SV=2
Length = 887
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 56 YELTLVASDSLNE---NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPG 102
Y L + A+D + N T +I + D ND P+FN ++Y ++EE PG
Sbjct: 347 YTLIVQATDQEGKGLSNTATAIIEVTDANDNIPIFNPTMYEGVVEENKPG 396
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 27 DNPPV----FERPTYRTQITEEDDRTLPKRVLQYELTLVASDSLNENKTTVVIHINDVND 82
D+PPV ER T ++TE+ DR R + AS E+ ++I + D ND
Sbjct: 204 DSPPVGIFIIERETGWLEVTEQLDREKIDRYTLLSHAVSASGQPVEDPMEIIITVMDQND 263
Query: 83 MPPVFNTSLYPAIMEE 98
PVF ++ +EE
Sbjct: 264 NKPVFIKEVFVGYIEE 279
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
Query: 1 YELKLAASDNLKE---NYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYE 57
Y L + A+D + N T +I V D NDN P+F Y + E T R
Sbjct: 347 YTLIVQATDQEGKGLSNTATAIIEVTDANDNIPIFNPTMYEGVVEENKPGTEVAR----- 401
Query: 58 LTLVASDSLNENKTTVVIHINDVN 81
LT+ D+ V HI N
Sbjct: 402 LTVTDQDAPGSPAWQAVYHIKSGN 425
>sp|Q9R0M0|CELR2_MOUSE Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculus
GN=Celsr2 PE=1 SV=2
Length = 2920
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 48/133 (36%), Gaps = 47/133 (35%)
Query: 17 TVVIHVKDVNDNPPVFERPTYRTQITEED------------DR----------------- 47
+V + + DVNDN P F +P Y ++ E+ DR
Sbjct: 596 SVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAVDRHAHSVITYQITSGNTRN 655
Query: 48 ---------------TLP---KRVLQYELTLVASDSLNENKTTVVIHINDVNDMPPVFNT 89
LP K QY L + ASD ++ +V+++ D N PVF +
Sbjct: 656 RFSITSQSGGGLVSLALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQS 715
Query: 90 SLYPAIMEEELPG 102
S Y E+ P
Sbjct: 716 SHYTVNGNEDRPA 728
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 48/149 (32%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFE-----------RPTYRTQI----TEED 45
Y L + ASD +++ +V++V D N + PVF+ RP T + T+ED
Sbjct: 682 YVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNGNEDRPAGTTVVLISATDED 741
Query: 46 -----------DRTLPK-RV------------------LQYELTLVASDS---LNENKTT 72
+ ++P+ R+ + Y L + A D+ + T
Sbjct: 742 TGENARITYFMEDSIPQFRIDGDTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTY 801
Query: 73 VVIHINDVNDMPPVFNTSLYPAIMEEELP 101
+ I +NDVND P F Y + E++P
Sbjct: 802 LEILVNDVNDNAPQFLRDSYQGTVYEDVP 830
Score = 28.9 bits (63), Expect = 9.5, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 1 YELKLAASDNLKE-----NYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
Y+L + ASD ++ + V + V+D NDN P F Y Q+ E+
Sbjct: 363 YKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYVVQVRED 411
>sp|Q9NYQ8|FAT2_HUMAN Protocadherin Fat 2 OS=Homo sapiens GN=FAT2 PE=1 SV=2
Length = 4349
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 1 YELKLAASDN----LKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQY 56
Y LKL A+D+ L E+ T + I V DVNDNPP F + Y T + E + + +VLQ
Sbjct: 3392 YSLKLRATDSGQPPLHED-TDIAIQVADVNDNPPRFFQLNYSTTVQE--NSPIGSKVLQL 3448
Query: 57 ELT 59
L+
Sbjct: 3449 ILS 3451
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITE 43
T VV++V D+NDNPP F +P Y ++E
Sbjct: 2363 TLVVVNVSDINDNPPEFRQPQYEANVSE 2390
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 13 ENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
E T VV+H+ D ND P+F P+YR I+E+
Sbjct: 129 EALTRVVVHILDQNDLKPLFSPPSYRVTISED 160
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELTLVASDSLNENKTTVVI 75
TV + V+DVNDNPP F + Y T I+E LP + +L DS N+
Sbjct: 2256 ATVEVLVEDVNDNPPTFSQLVYTTSISE----GLPAQTPVIQLLASDQDS-GRNRDVSYQ 2310
Query: 76 HINDVNDMPPVFN 88
+ D +D+ F
Sbjct: 2311 IVEDGSDVSKFFQ 2323
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 1 YELKLAASDNLKENYT--TVVIHVKDVNDNPPVFERPTYRTQITE 43
Y+LK+ S N+ +T VV+ + D NDN P+F + T+ QI+E
Sbjct: 1726 YQLKIRGS-NMAGAFTDVMVVVDIIDENDNAPMFLKSTFVGQISE 1769
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 18 VVIHVKDVNDNPPVFERPTYRTQI 41
V+IHV+DVND+PP F Y I
Sbjct: 1858 VIIHVRDVNDSPPRFSEQIYEVAI 1881
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 51 KRVLQYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYP 105
K V T A S +E TV + + DVND PP F+ +Y + E LP P
Sbjct: 2238 KHVFTVRATDTALGSFSE--ATVEVLVEDVNDNPPTFSQLVYTTSISEGLPAQTP 2290
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 67 NENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
+ T VVI I D N+ P+FN S Y ++E +P
Sbjct: 438 GQASTVVVIDIVDCNNHAPLFNRSSYDGTLDENIP 472
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 17 TVVIHVKDVNDNPPVFERPTYRTQITE 43
+V I V DVNDN PVFE Y+ +TE
Sbjct: 2782 SVNIQVGDVNDNRPVFEADPYKAVLTE 2808
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
Y L++ ASD + TV I V DVNDN P + Y ++ E+
Sbjct: 2980 YLLRVTASDGKFQASVTVEIFVLDVNDNSPQCSQLLYTGKVHED 3023
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELTLVASD 64
+ VV+ + DVNDNPP+F + ++ E P V + LVASD
Sbjct: 1226 SRVVVGILDVNDNPPIFSHKLFNVRLPERLSPVSPGPVYR----LVASD 1270
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 73 VVIHINDVNDMPPVFNTSLY 92
V+IH+ DVND PP F+ +Y
Sbjct: 1858 VIIHVRDVNDSPPRFSEQIY 1877
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 68 ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
E T VV+HI D ND+ P+F+ Y + E++P
Sbjct: 129 EALTRVVVHILDQNDLKPLFSPPSYRVTISEDMP 162
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 68 ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEEL----PGP 103
++ + VV+ I DVND PP+F+ L+ + E L PGP
Sbjct: 1223 KSTSRVVVGILDVNDNPPIFSHKLFNVRLPERLSPVSPGP 1262
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 40 QITEEDDRTLPKRVLQYELTLVASDS----LNENKTTVVIHINDVNDMPPVFNTSLYPAI 95
Q+ + DR ++ Y L L A+DS L+E+ T + I + DVND PP F Y
Sbjct: 3379 QVAKALDR---EQASSYSLKLRATDSGQPPLHED-TDIAIQVADVNDNPPRFFQLNYSTT 3434
Query: 96 MEEELP 101
++E P
Sbjct: 3435 VQENSP 3440
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 55 QYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSLLKL 111
+Y L + ASD + TV I + DVND P + LY + E+ PG H +LK+
Sbjct: 2979 KYLLRVTASDGKFQASVTVEIFVLDVNDNSPQCSQLLYTGKVHEDVFPG---HFILKV 3033
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 64/168 (38%), Gaps = 60/168 (35%)
Query: 1 YELKLAASDNLKENYTTVVIHVK----DVNDN--PPVFERPTYRTQITE----------- 43
Y L L ASD + + HV+ DVN+N PP F ++ Q+ E
Sbjct: 995 YNLSLWASDGGRPLARRTLCHVEVIVLDVNENLHPPHFASFVHQGQVQENSPSGTQVIVV 1054
Query: 44 --EDDRTLPKRVLQYEL---TLVASDSLNENK---------------------------- 70
+DD + LQY L T +A+ S+N++
Sbjct: 1055 AAQDDDSGLDGELQYFLRAGTGLAAFSINQDTGMIQTLAPLDREFASYYWLTVLAVDRGS 1114
Query: 71 ------TTVVIHINDVNDMPPVFNTS-LYPAIMEEELPGPYPHSLLKL 111
T V I + D ND PP + + YP+I E+ P S+L+L
Sbjct: 1115 VPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQED---APVGTSVLQL 1159
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 72 TVVIHINDVNDMPPVFNTSLYPAIMEEELP 101
+V I + DVND PVF Y A++ E +P
Sbjct: 2782 SVNIQVGDVNDNRPVFEADPYKAVLTENMP 2811
>sp|Q9Y5G2|PCDGE_HUMAN Protocadherin gamma-B2 OS=Homo sapiens GN=PCDHGB2 PE=2 SV=1
Length = 931
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y L + A+D K + V +H+ DVNDN PVF++ +Y + E
Sbjct: 418 YNLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAE 463
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 1 YELKLAASDNL---KENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
++L L A D + T + I V D NDNPPVF + YR + E+
Sbjct: 208 HQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLRED 254
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 54/138 (39%)
Query: 18 VVIHVKDVNDNPPVFERPTYRTQITEE--------------------------------- 44
+ + V+D+NDN P+F++ +I E
Sbjct: 119 IAVIVQDINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYF 178
Query: 45 --------DDRTLPKRVLQY----------ELTLVASDSLN---ENKTTVVIHINDVNDM 83
D R P+ +L++ +L L A D + T + I + D ND
Sbjct: 179 DLAEKQTPDGRKYPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDN 238
Query: 84 PPVFNTSLYPAIMEEELP 101
PPVF+ +Y + E++P
Sbjct: 239 PPVFSQDVYRVTLREDVP 256
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 55 QYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLY 92
+Y LT+ A+D + V +HI+DVND PVF + Y
Sbjct: 417 EYNLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSY 457
>sp|Q5DRA9|PCDGE_PANTR Protocadherin gamma-B2 OS=Pan troglodytes GN=PCDHGB2 PE=3 SV=1
Length = 931
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y L + A+D K + V +H+ DVNDN PVF++ +Y + E
Sbjct: 418 YNLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAE 463
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 54/138 (39%)
Query: 18 VVIHVKDVNDNPPVFERPTYRTQITEE--------------------------------- 44
+ + V+D+NDN P+F++ +I E
Sbjct: 119 IAVIVQDINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYF 178
Query: 45 --------DDRTLPKRVLQY----------ELTLVASDSLN---ENKTTVVIHINDVNDM 83
D R P+ +LQ+ +L L A D + T + + + D ND
Sbjct: 179 DLAEKQTPDGRKYPELILQHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRVKVTDANDN 238
Query: 84 PPVFNTSLYPAIMEEELP 101
PPVF+ +Y + E++P
Sbjct: 239 PPVFSQDVYRVTLREDVP 256
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 1 YELKLAASDNL---KENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
++L L A D + T + + V D NDNPPVF + YR + E+
Sbjct: 208 HQLVLTAVDGGDPPQSGTTQIRVKVTDANDNPPVFSQDVYRVTLRED 254
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 55 QYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLY 92
+Y LT+ A+D + V +HI+DVND PVF + Y
Sbjct: 417 EYNLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSY 457
>sp|Q9VW71|FAT2_DROME Fat-like cadherin-related tumor suppressor homolog OS=Drosophila
melanogaster GN=kug PE=2 SV=2
Length = 4705
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y L ++ +D +T +++ V D+NDNPP F + Y I+E
Sbjct: 1472 YNLTISVTDGTFTAFTNLLVQVIDINDNPPQFAKDVYHVNISE 1514
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 17/116 (14%)
Query: 7 ASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE-------------DDRTLPKRV 53
D +E ++ ++I V D+NDN P+F YR + E+ D R
Sbjct: 3160 GKDFTQECFSEIIITVNDINDNMPIFSMAQYRVSVPEDAQLNTLITKVHAMDKDFGVNRQ 3219
Query: 54 LQYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPG-PYPHSL 108
++Y L D +K+T +I ++ D + SL+ ++ E G P HS+
Sbjct: 3220 IKYSLMGENHDYFKISKSTGIIRLHKSLDRETI---SLFNLTVKAEDCGVPKLHSI 3272
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 3 LKLAASDN---LKENYTTVVIHVKDVNDNPPVFERPTYRTQI 41
L++A SDN + + + +V+ V D+NDN P F++ Y+ Q+
Sbjct: 1264 LEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQV 1305
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 7/52 (13%)
Query: 19 VIHVKDVNDNPPVFERPTYRTQITEEDDR----TLPKRVLQYELTLVASDSL 66
+I VKD+NDN P F P+Y T+++ R LPK Y+ + +DSL
Sbjct: 2452 IIPVKDLNDNAPCFVEPSYFTKVSVAAVRGQFVALPK---AYDKDISDTDSL 2500
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 49/139 (35%), Gaps = 47/139 (33%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE---------------- 44
Y L + A+D V I VKD+NDN P +P Y E
Sbjct: 3052 YNLSIIATDGKFTAKANVEIDVKDINDNTPYCLKPRYHISTNESISIGTTLVEVKAIDFD 3111
Query: 45 --------------DDRTLPKR--------VLQYELT----LVA-----SDSLNENKTTV 73
DD ++ K L E T LVA D E + +
Sbjct: 3112 FQSKLRFYLSGKGADDFSIGKESGILKVASALDRETTPKYKLVAHVQDGKDFTQECFSEI 3171
Query: 74 VIHINDVNDMPPVFNTSLY 92
+I +ND+ND P+F+ + Y
Sbjct: 3172 IITVNDINDNMPIFSMAQY 3190
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITE 43
TV +++ D+NDNPP F Y +I E
Sbjct: 3273 ATVAVNILDINDNPPEFSMRQYSCKILE 3300
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 1 YELKLAASDN----LKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
YEL + ASD ++ + I VKD+NDN P FER ++T+
Sbjct: 575 YELIIRASDWGLPYRRQTEIKLSIVVKDINDNRPQFERVNCYGKVTK 621
>sp|Q5DRB2|PCDG8_PANTR Protocadherin gamma-A8 OS=Pan troglodytes GN=PCDHGA8 PE=3 SV=1
Length = 932
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 60/162 (37%), Gaps = 66/162 (40%)
Query: 1 YELKLAASDNLK-ENYTTVVIHVK--DVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYE 57
+ L L ASD + +TV IHV D NDN PVF P YR ++ E P L
Sbjct: 208 HHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVLEN---MPPGTRL--- 261
Query: 58 LTLVASD------------------------SLNEN------------------------ 69
LT+ ASD LNEN
Sbjct: 262 LTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEECSFYEMEIQA 321
Query: 70 --------KTTVVIHINDVND-MPPVFNTSLYPAIMEEELPG 102
+T ++I + DVND P V TSL+ ++E LPG
Sbjct: 322 EDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPG 363
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEEDDR 47
T + +HV D+NDNPP F +Y I E + R
Sbjct: 436 TQIALHVADINDNPPTFPHASYSAYILENNLR 467
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 56 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPGPYPHSL 108
Y +T++ASD +T + +H+ D+ND PP F + Y A I+E L G SL
Sbjct: 418 YNITVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSL 474
>sp|P09803|CADH1_MOUSE Cadherin-1 OS=Mus musculus GN=Cdh1 PE=1 SV=1
Length = 884
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLKENYTT---VVIHVKDVNDNPPVFERPTYRTQITE 43
Y L + A+D E +T VI VKD+NDN PVF TY+ Q+ E
Sbjct: 343 YTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPE 388
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 27 DNPPV----FERPTYRTQITEEDDRTLPKRVLQYELTLVASDSLNENKTTVVIHINDVND 82
D PPV ER T ++T+ DR + + Y + ++ E+ +VI + D ND
Sbjct: 200 DKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQND 259
Query: 83 MPPVFNTSLY-PAIMEEELPG 102
P F ++ ++ E +PG
Sbjct: 260 NRPEFTQEVFEGSVAEGAVPG 280
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 56 YELTLVASDSLNENKTT---VVIHINDVNDMPPVFNTSLYPAIMEE 98
Y L + A+D E +T VI + D+ND PVFN S Y + E
Sbjct: 343 YTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPE 388
>sp|Q9Y5G3|PCDGD_HUMAN Protocadherin gamma-B1 OS=Homo sapiens GN=PCDHGB1 PE=2 SV=1
Length = 927
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y + + A+D K + T++ +H+ D+NDN PVF + +Y ++E
Sbjct: 414 YNVTIIATDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSE 459
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 56 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLY 92
Y +T++A+D ++T++ +HI+D+ND PVF+ + Y
Sbjct: 414 YNVTIIATDKGKPALSSRTSITLHISDINDNAPVFHQASY 453
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITE 43
T + I V D NDN PVF + YR + E
Sbjct: 223 THIWIRVTDANDNAPVFSQEVYRVSLQE 250
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 56 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKL 111
+ L L A D + T + I + D ND PVF+ +Y ++E + P+ S+L++
Sbjct: 205 HRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQENV--PWGTSVLRV 261
>sp|Q5DRB0|PCDGD_PANTR Protocadherin gamma-B1 OS=Pan troglodytes GN=PCDHGB1 PE=3 SV=1
Length = 927
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y + + A+D K + T++ +H+ D+NDN PVF + +Y ++E
Sbjct: 414 YNVTIIATDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSE 459
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 56 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLY 92
Y +T++A+D ++T++ +HI+D+ND PVF+ + Y
Sbjct: 414 YNVTIIATDKGKPALSSRTSITLHISDINDNAPVFHQASY 453
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITE 43
T + I V D NDN PVF + YR + E
Sbjct: 223 THIWIRVTDANDNAPVFSQEVYRVSLQE 250
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 56 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLKL 111
+ L L A D + T + I + D ND PVF+ +Y ++E + P+ S+L++
Sbjct: 205 HRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQENV--PWGTSVLRV 261
>sp|Q5DRA7|PCDGH_PANTR Protocadherin gamma-B5 OS=Pan troglodytes GN=PCDHGB5 PE=3 SV=1
Length = 923
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y + + A+D K + +V++H++DVNDN PVF + +Y + E
Sbjct: 414 YNVTITATDRGKPPLSSSISVILHIRDVNDNAPVFHQASYLVSVPE 459
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITE 43
T + I V D NDNPPVF R YR + E
Sbjct: 226 TELRIQVTDANDNPPVFNRDVYRVSLRE 253
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 50/142 (35%), Gaps = 54/142 (38%)
Query: 14 NYTTVVIHVKDVNDNPPVFERPTYRTQITE------------------------------ 43
N+ V + ++D+ND+ P F + ++ QI+E
Sbjct: 115 NFYHVNVEIEDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSL 174
Query: 44 -----------EDDRTLPKRVLQ----------YELTLVASDSLN---ENKTTVVIHIND 79
+D P+ L+ + L L A D N T + I + D
Sbjct: 175 NPSFSLIIKEKQDGSKYPELALEKTLDREQQSYHRLVLTALDGGNPPLSGTTELRIQVTD 234
Query: 80 VNDMPPVFNTSLYPAIMEEELP 101
ND PPVFN +Y + E +P
Sbjct: 235 ANDNPPVFNRDVYRVSLRENVP 256
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 55 QYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLY 92
+Y +T+ A+D + +V++HI DVND PVF+ + Y
Sbjct: 413 EYNVTITATDRGKPPLSSSISVILHIRDVNDNAPVFHQASY 453
>sp|Q9Y5G0|PCDGH_HUMAN Protocadherin gamma-B5 OS=Homo sapiens GN=PCDHGB5 PE=2 SV=1
Length = 923
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y + + A+D K + +V++H++DVNDN PVF + +Y + E
Sbjct: 414 YNVTITATDRGKPPLSSSISVILHIRDVNDNAPVFHQASYLVSVPE 459
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITE 43
T + I V D NDNPPVF R YR + E
Sbjct: 226 TELRIQVTDANDNPPVFNRDVYRVSLRE 253
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 55 QYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLY 92
+Y +T+ A+D + +V++HI DVND PVF+ + Y
Sbjct: 413 EYNVTITATDRGKPPLSSSISVILHIRDVNDNAPVFHQASY 453
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 50/142 (35%), Gaps = 54/142 (38%)
Query: 14 NYTTVVIHVKDVNDNPPVFERPTYRTQITE------------------------------ 43
N+ V + ++D+ND+ P F + ++ QI+E
Sbjct: 115 NFYHVNVEIEDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSL 174
Query: 44 -----------EDDRTLPKRVLQ----------YELTLVASDSLN---ENKTTVVIHIND 79
+D P+ L+ + L L A D + T + I + D
Sbjct: 175 NPSFSLIIKEKQDGSKYPELALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTD 234
Query: 80 VNDMPPVFNTSLYPAIMEEELP 101
ND PPVFN +Y + E +P
Sbjct: 235 ANDNPPVFNRDVYRVSLRENVP 256
>sp|Q9R0T4|CADH1_RAT Cadherin-1 OS=Rattus norvegicus GN=Cdh1 PE=1 SV=1
Length = 886
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLKENYTT---VVIHVKDVNDNPPVFERPTYRTQITE 43
Y L + A+D E +T VI VKD+NDN P+F TY+ Q+ E
Sbjct: 345 YTLVVQAADLQGEGLSTTAKAVITVKDINDNAPIFNPSTYQGQVLE 390
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 56 YELTLVASDSLNENKTT---VVIHINDVNDMPPVFNTSLYPA-IMEEEL 100
Y L + A+D E +T VI + D+ND P+FN S Y ++E E+
Sbjct: 345 YTLVVQAADLQGEGLSTTAKAVITVKDINDNAPIFNPSTYQGQVLENEV 393
>sp|Q9HC56|PCDH9_HUMAN Protocadherin-9 OS=Homo sapiens GN=PCDH9 PE=1 SV=2
Length = 1237
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 1 YELKLAASDNLKE--NYTTVV-IHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYE 57
+ K+ ASD+ K N T +V + ++D NDNPP+F +P ++E + R L Y
Sbjct: 435 FSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGL------YL 488
Query: 58 LTLVASDSLNENKTTVVIHIN 78
T+ A+D + +V +
Sbjct: 489 TTISATDEDSGKNADIVYQLG 509
>sp|Q5DRB4|PCDG6_PANTR Protocadherin gamma-A6 OS=Pan troglodytes GN=PCDHGA6 PE=3 SV=1
Length = 932
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDN---LKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y L L A D ++ + +++ V DVNDN PVF +P YR + E
Sbjct: 208 YRLVLTAMDGGDPVRSSIAQILVTVLDVNDNTPVFTQPVYRVSVPE 253
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEEDDR 47
T + ++V D NDNPP F +Y + E + R
Sbjct: 436 TIISLNVADTNDNPPTFPHSSYSVYVLENNPR 467
>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan OS=Drosophila
melanogaster GN=stan PE=1 SV=4
Length = 3579
Score = 37.0 bits (84), Expect = 0.040, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 50/138 (36%), Gaps = 48/138 (34%)
Query: 12 KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRV-----------LQYE--- 57
K ++VVI V+DVNDN P F Y + E+ P L YE
Sbjct: 774 KSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITT 833
Query: 58 ---------------------------------LTLVASDSLNENKT-TVVIHINDVNDM 83
LT+ A+DS + T TV I+I D N+
Sbjct: 834 GNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNF 893
Query: 84 PPVFNTSLYPAIMEEELP 101
P+F + Y A + E+ P
Sbjct: 894 APIFENAPYSASVFEDAP 911
Score = 33.1 bits (74), Expect = 0.51, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 56 YELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPG 102
Y LT+ A D N + T V I + DVND P F + LY A I+E+ L G
Sbjct: 973 YLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVG 1023
Score = 33.1 bits (74), Expect = 0.53, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEE 44
T V I V DVNDN P F+ P Y+ I E+
Sbjct: 991 TDVEIGVTDVNDNAPAFKSPLYQASILED 1019
Score = 32.7 bits (73), Expect = 0.77, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Query: 3 LKLAASDNLKENYTTVVIHVKDVNDNPPVFERP-TYRTQITEEDDRTLPKRVLQYELTLV 61
+++ A D+ + + + + +DN P+ P T Q + DR R + +V
Sbjct: 709 IRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGR---FAFQVV 765
Query: 62 ASDS---LNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYP 105
A D ++VVI + DVND P FN Y A + E+ P P
Sbjct: 766 AKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTP 812
>sp|Q9HCL0|PCD18_HUMAN Protocadherin-18 OS=Homo sapiens GN=PCDH18 PE=2 SV=3
Length = 1135
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 55 QYELTLVASDSLNENKTTV---VIHINDVNDMPPVFNTSLYP-AIMEEELPGPY 104
+Y LT++A D + +TV + IND+ND PP F S Y I E PG Y
Sbjct: 430 EYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNSPGAY 483
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDN---LKENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
YEL+L ASD + + + I + D NDN P FE+ +Y Q+ E
Sbjct: 212 YELQLTASDMGVPQRSGSSILKISISDSNDNSPAFEQQSYIIQLLE 257
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLKENYTTV---VIHVKDVNDNPPVFERPTYRTQITE 43
Y L + A D + +TV + + D+NDNPP F+R Y I+E
Sbjct: 431 YSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISE 476
>sp|Q9Y5F9|PCDGI_HUMAN Protocadherin gamma-B6 OS=Homo sapiens GN=PCDHGB6 PE=2 SV=1
Length = 930
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 17/24 (70%)
Query: 20 IHVKDVNDNPPVFERPTYRTQITE 43
I VKD NDNPPVF R YR ++E
Sbjct: 230 ISVKDTNDNPPVFSRDEYRISLSE 253
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y + + A+D K + ++ ++V D+NDN PVF++ +Y + E
Sbjct: 418 YNVTIVATDRGKPPLSSSRSITLYVADINDNAPVFDQTSYVVHVAE 463
>sp|Q5DRA6|PCDGI_PANTR Protocadherin gamma-B6 OS=Pan troglodytes GN=PCDHGB6 PE=3 SV=1
Length = 930
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 17/24 (70%)
Query: 20 IHVKDVNDNPPVFERPTYRTQITE 43
I VKD NDNPPVF R YR ++E
Sbjct: 230 ISVKDTNDNPPVFSRDEYRISLSE 253
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y + + A+D K + ++ ++V D+NDN PVF++ +Y + E
Sbjct: 418 YNVTIVATDRGKPPLSSSRSITLYVADINDNAPVFDQTSYVVHVAE 463
>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens
GN=CELSR3 PE=1 SV=2
Length = 3312
Score = 36.6 bits (83), Expect = 0.049, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 48/149 (32%)
Query: 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE--------------DD 46
++L L ASD ++ V I++ D N + PVF+ Y + E+ DD
Sbjct: 827 FKLVLTASDRALHDHCYVHINITDANTHRPVFQSAHYSVSVNEDRPMGSTIVVISASDDD 886
Query: 47 RTLPKRV-------------------------------LQYELTLVASDS---LNENKTT 72
R+ + Y L + A D+ + T
Sbjct: 887 VGENARITYLLEDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAITARDNGIPQKADTTY 946
Query: 73 VVIHINDVNDMPPVFNTSLYPAIMEEELP 101
V + +NDVND P F S Y ++ E+ P
Sbjct: 947 VEVMVNDVNDNAPQFVASHYTGLVSEDAP 975
Score = 32.3 bits (72), Expect = 0.91, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 16 TTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLPKRVLQYELT 59
T V + V D ND+ PVFE+ YR + E + P +LQ T
Sbjct: 417 TMVAVTVADRNDHSPVFEQAQYRETLRENVEEGYP--ILQLRAT 458
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 1 YELKLAASDNLKE---NYTTVVIHVK--DVNDNPPVFERPTYRTQITEE 44
YEL + ASD +E TV +H+ D NDN P F Y Q+ E+
Sbjct: 509 YELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVRED 557
>sp|Q9Y5F8|PCDGJ_HUMAN Protocadherin gamma-B7 OS=Homo sapiens GN=PCDHGB7 PE=2 SV=1
Length = 929
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 1 YELKLAASDNLK---ENYTTVVIHVKDVNDNPPVFERPTYRTQITE 43
Y + +AA+D K + T+ +H+ DVNDN PVF + Y + E
Sbjct: 418 YNVTIAATDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVPE 463
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 5/42 (11%)
Query: 55 QYELTLVASDS----LNENKTTVVIHINDVNDMPPVFNTSLY 92
+Y +T+ A+D L+ +KT + +HI DVND PVF S Y
Sbjct: 417 EYNVTIAATDRGKPPLSSSKT-ITLHITDVNDNAPVFGQSAY 457
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 5 LAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEE 44
L D + + I V D NDNPPVF + YR + E+
Sbjct: 215 LDGGDPPRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.133 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,363,443
Number of Sequences: 539616
Number of extensions: 1567561
Number of successful extensions: 5802
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 3481
Number of HSP's gapped (non-prelim): 2354
length of query: 111
length of database: 191,569,459
effective HSP length: 79
effective length of query: 32
effective length of database: 148,939,795
effective search space: 4766073440
effective search space used: 4766073440
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)