Query psy585
Match_columns 111
No_of_seqs 237 out of 1299
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 19:40:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy585.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/585hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a62_A Cadherin-8; extracellul 99.9 4.6E-26 1.6E-30 164.8 12.3 110 1-110 71-238 (322)
2 3q2w_A Cadherin-2; cell adhesi 99.9 1.8E-24 6.1E-29 165.7 13.2 109 1-110 74-245 (559)
3 3ubf_A Neural-cadherin; cell a 99.9 1.5E-24 5.1E-29 156.1 11.9 108 1-109 71-236 (316)
4 3q2v_A Cadherin-1; cell adhesi 99.9 2.4E-24 8.3E-29 164.7 13.5 109 1-110 74-243 (550)
5 1l3w_A EP-cadherin, C-cadherin 99.9 4.1E-24 1.4E-28 163.4 10.7 109 1-110 80-249 (546)
6 3ubh_A Neural-cadherin; cell a 99.9 2.2E-23 7.4E-28 155.0 11.4 108 1-109 74-241 (419)
7 3q2v_A Cadherin-1; cell adhesi 99.9 6.1E-23 2.1E-27 157.0 14.1 107 1-109 187-354 (550)
8 1q55_A EP-cadherin, C-cadherin 99.9 1.4E-23 4.9E-28 167.6 10.6 109 1-110 229-398 (880)
9 3ubh_A Neural-cadherin; cell a 99.9 1.1E-22 3.7E-27 151.2 11.9 108 1-109 182-347 (419)
10 3q2w_A Cadherin-2; cell adhesi 99.9 6.8E-22 2.3E-26 151.5 11.6 108 1-109 186-360 (559)
11 1l3w_A EP-cadherin, C-cadherin 99.9 2.4E-22 8.1E-27 153.7 7.3 107 1-109 193-360 (546)
12 2a4e_A Cadherin-11; dimer, cal 99.9 5.1E-21 1.8E-25 131.5 11.5 86 1-86 72-215 (215)
13 1q55_A EP-cadherin, C-cadherin 99.9 7.7E-22 2.6E-26 157.7 7.3 107 1-109 342-509 (880)
14 2x2u_A Proto-oncogene tyrosine 99.8 1.2E-21 4.2E-26 136.9 6.4 87 2-88 94-245 (246)
15 3mvs_A Cadherin-23, otocadheri 99.8 2.4E-20 8.1E-25 127.5 12.1 84 1-84 78-210 (210)
16 3mvs_A Cadherin-23, otocadheri 99.8 9.3E-19 3.2E-23 119.5 9.3 83 27-109 3-131 (210)
17 2yst_A Protocadherin-7; BH-PCD 99.8 6.6E-19 2.3E-23 110.7 6.5 66 20-85 2-119 (119)
18 3ubf_A Neural-cadherin; cell a 99.7 9.3E-18 3.2E-22 120.7 10.1 83 1-84 177-316 (316)
19 3qrb_A Cadherin-1; cell adhesi 99.7 1E-16 3.5E-21 109.5 10.8 79 1-79 74-213 (213)
20 3ppe_A Vascular endothelial ca 99.7 2.1E-16 7.2E-21 107.4 11.4 79 1-79 69-203 (203)
21 2qvi_A Cadherin-2; beta barrel 99.7 1.4E-16 4.9E-21 109.1 10.2 79 1-79 74-215 (215)
22 3k5r_A Cadherin 13; mouse, str 99.7 2.7E-16 9.1E-21 107.8 10.9 79 1-79 74-218 (218)
23 3lnd_A CDH6 protein, cadherin 99.7 1E-16 3.5E-21 109.2 7.0 79 1-79 71-207 (207)
24 2ee0_A Protocadherin-9; Ca dom 99.6 6.1E-16 2.1E-20 96.6 6.5 62 20-81 2-114 (114)
25 2a62_A Cadherin-8; extracellul 99.6 5.4E-15 1.8E-19 106.7 9.7 48 1-48 179-231 (322)
26 3ppe_A Vascular endothelial ca 99.6 1.2E-14 4.2E-19 98.7 9.0 59 51-109 64-126 (203)
27 3k5r_A Cadherin 13; mouse, str 99.6 1.1E-14 3.9E-19 99.6 8.9 60 51-110 69-131 (218)
28 4apx_B Protocadherin-15, otoca 99.6 5.6E-14 1.9E-18 97.9 11.8 77 3-79 96-237 (242)
29 2x2u_A Proto-oncogene tyrosine 99.5 2.3E-15 7.8E-20 105.1 2.6 53 57-109 94-161 (246)
30 2qvi_A Cadherin-2; beta barrel 99.5 4.3E-14 1.5E-18 96.8 6.5 60 51-110 69-131 (215)
31 3qrb_A Cadherin-1; cell adhesi 99.5 7.8E-14 2.7E-18 95.2 7.1 59 51-109 69-130 (213)
32 2a4e_A Cadherin-11; dimer, cal 99.5 1.4E-13 4.7E-18 94.4 7.5 59 51-109 67-129 (215)
33 2yqg_A Desmoglein-2, HDGC; cad 99.4 2.6E-13 9E-18 85.6 6.0 40 51-90 81-123 (123)
34 3lnd_A CDH6 protein, cadherin 99.4 1.4E-13 4.7E-18 93.6 3.8 59 51-109 66-128 (207)
35 4apx_B Protocadherin-15, otoca 99.4 8.7E-12 3E-16 86.8 10.8 52 55-106 93-146 (242)
36 1ncg_A N-cadherin; cell adhesi 99.2 1.3E-11 4.3E-16 76.4 5.0 37 51-87 71-110 (110)
37 1wyj_A Protocadherin beta 14; 99.1 4.4E-12 1.5E-16 80.3 -0.7 43 54-96 82-124 (125)
38 2ee0_A Protocadherin-9; Ca dom 98.9 2.5E-10 8.6E-15 70.9 1.5 36 75-110 2-37 (114)
39 1wyj_A Protocadherin beta 14; 98.9 2.5E-10 8.6E-15 72.1 0.0 40 1-40 84-123 (125)
40 2yst_A Protocadherin-7; BH-PCD 98.8 7.5E-10 2.6E-14 69.1 1.5 35 75-109 2-36 (119)
41 1wuz_A Pcdha4 protein, CNR-EC1 97.4 0.00041 1.4E-08 41.8 5.9 27 55-83 77-103 (103)
42 2omz_B Epithelial-cadherin; le 97.3 0.00023 8E-09 43.1 4.0 30 51-80 73-105 (105)
43 3k6f_A T-cadherin; cell adhesi 97.0 0.00077 2.6E-08 40.3 4.2 29 51-79 69-100 (100)
44 3k6d_A T-cadherin; cell adhesi 97.0 0.00097 3.3E-08 39.8 4.3 29 51-79 68-99 (99)
45 3k6i_A T-cadherin; cell adhesi 97.0 0.001 3.6E-08 39.6 4.2 29 51-79 68-99 (99)
46 1zvn_A Mn-cadherin; strand dim 96.9 0.0012 4E-08 39.6 3.9 29 51-79 67-99 (99)
47 1zxk_A Cadherin-8; strand dime 96.9 0.0011 3.6E-08 39.7 3.7 29 51-79 66-98 (98)
48 2yrl_A KIAA1837 protein; PKD d 89.1 1 3.6E-05 26.6 5.2 29 54-82 69-98 (102)
49 3pdd_A Glycoside hydrolase, fa 86.7 4.9 0.00017 26.3 9.7 29 1-31 63-93 (190)
50 3ead_A Na/Ca exchange protein; 68.8 8.4 0.00029 23.7 4.3 49 49-100 81-133 (137)
51 2y72_A Collagenase, collagenas 67.6 12 0.00041 20.8 4.5 27 52-78 57-84 (85)
52 3pe9_A Fibronectin(III)-like m 66.1 13 0.00044 21.8 4.5 27 53-79 60-88 (98)
53 2kpn_A Bacillolysin; solution 63.8 15 0.00053 21.7 4.6 30 1-30 61-91 (103)
54 2kpn_A Bacillolysin; solution 55.5 30 0.001 20.4 5.3 34 52-85 57-91 (103)
55 1b4r_A Protein (PKD1_human); P 52.2 29 0.001 19.4 4.4 26 53-78 54-79 (80)
56 2lv4_A Putative outer membrane 40.9 17 0.00057 22.6 2.1 27 58-84 50-79 (146)
57 2kzw_A Uncharacterized protein 36.8 66 0.0023 20.0 4.5 29 52-80 112-140 (145)
58 3ima_B Cysteine proteinase inh 35.9 37 0.0013 19.1 3.0 21 1-21 55-75 (91)
59 1wgo_A VPS10 domain-containing 35.6 39 0.0013 20.7 3.1 28 51-78 91-118 (123)
60 2e7m_A Protein KIAA0319; PKD d 35.3 26 0.00089 21.2 2.3 26 53-78 79-104 (113)
61 1jh4_B PAIP1, polyadenylate-bi 32.9 12 0.00043 16.4 0.4 13 81-93 7-19 (26)
62 3rb5_A Na/Ca exchange protein; 32.5 1.3E+02 0.0043 21.0 12.9 51 49-100 86-138 (298)
63 2c4x_A Endoglucanase, ctcel9D- 27.8 71 0.0024 21.9 3.8 26 1-26 71-97 (260)
64 1u2c_A Dystroglycan; IG-like d 27.7 1.5E+02 0.0051 20.3 6.4 32 51-82 65-104 (246)
65 1eqk_A Oryzacystatin-I; alpha 25.2 83 0.0028 17.9 3.3 22 1-22 60-81 (102)
66 3ott_A Two-component system se 24.8 80 0.0027 24.3 4.0 31 53-88 719-752 (758)
67 2yhg_A SDE_182CT, cellulose-bi 23.4 1.1E+02 0.0039 22.7 4.4 25 53-77 409-436 (437)
68 4a2l_A BT_4663, two-component 22.0 1.1E+02 0.0036 23.7 4.2 31 53-88 753-786 (795)
69 3v9f_A Two-component system se 21.5 1.1E+02 0.0038 23.6 4.2 26 53-78 747-775 (781)
70 3ul5_A Canecystatin-1; defense 21.1 94 0.0032 19.3 3.1 20 1-20 99-119 (139)
71 2kxg_A Aspartic protease inhib 20.4 1.3E+02 0.0045 17.2 3.8 28 48-75 48-77 (95)
No 1
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.94 E-value=4.6e-26 Score=164.75 Aligned_cols=110 Identities=29% Similarity=0.374 Sum_probs=96.8
Q ss_pred CEEEEEEEeCC----CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCCC--------------------------
Q psy585 1 YELKLAASDNL----KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP-------------------------- 50 (111)
Q Consensus 1 y~l~v~A~D~~----~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~-------------------------- 50 (111)
|.|.|+|+|++ +++.+.+.|.|.|+|||+|.|.+..|.++|+|+.+.|+.
T Consensus 71 y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~ 150 (322)
T 2a62_A 71 YTLTAQAVDFETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILE 150 (322)
T ss_dssp CCEEEEEECTTTCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEE
T ss_pred EEEEEEEEECCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEcc
Confidence 78999999974 467889999999999999999999999999998543221
Q ss_pred -----------------------ceEeEEEEEEEEecCCc-----cceEEEEEEEeecCCCCCEEecCcceEEEECCCCC
Q psy585 51 -----------------------KRVLQYELTLVASDSLN-----ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPG 102 (111)
Q Consensus 51 -----------------------e~~~~y~l~v~a~d~~~-----~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~~~~ 102 (111)
|....|.|+|.|+|+|. +++++|+|+|.|+|||+|.|.+..|.+.|+|++++
T Consensus 151 ~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~ 230 (322)
T 2a62_A 151 GQPYFSIEPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVL 230 (322)
T ss_dssp CTTTEEECTTTCCEEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSS
T ss_pred CCCCEEEecCCCEEEecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCC
Confidence 45678999999999874 36899999999999999999999999999999999
Q ss_pred CccEEEEE
Q psy585 103 PYPHSLLK 110 (111)
Q Consensus 103 ~~~~~~iq 110 (111)
|+.+..++
T Consensus 231 gt~v~~v~ 238 (322)
T 2a62_A 231 GTAIGRVK 238 (322)
T ss_dssp CCEEEEEE
T ss_pred CcEEEEEE
Confidence 99887765
No 2
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.92 E-value=1.8e-24 Score=165.74 Aligned_cols=109 Identities=31% Similarity=0.399 Sum_probs=94.5
Q ss_pred CEEEEEEEeCC---CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCCC---------------------------
Q psy585 1 YELKLAASDNL---KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP--------------------------- 50 (111)
Q Consensus 1 y~l~v~A~D~~---~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~--------------------------- 50 (111)
|.|.++|+|+| +++++.+.|+|.|+|||+|.|.+..|.++|+|+.+.|+.
T Consensus 74 y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~ 153 (559)
T 3q2w_A 74 FHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQA 153 (559)
T ss_dssp EEEEEEEEETTSCEEEEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEE
T ss_pred EEEEEEEEECCCCccceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCC
Confidence 78999999975 567889999999999999999999999999998543321
Q ss_pred ---------------------------ceEeEEEEEEEEecCCc------cceEEEEEEEeecCCCCCEEecCcceEEEE
Q psy585 51 ---------------------------KRVLQYELTLVASDSLN------ENKTTVVIHINDVNDMPPVFNTSLYPAIME 97 (111)
Q Consensus 51 ---------------------------e~~~~y~l~v~a~d~~~------~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~ 97 (111)
|....|.|+|+|+|+++ +++++|+|+|.|+|||+|.|.+..|.+.|+
T Consensus 154 ~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~ 233 (559)
T 3q2w_A 154 PSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVP 233 (559)
T ss_dssp SCCSCTTCEEECTTTCEEEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEE
T ss_pred CCCCCcceEEEeCCceEEEEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEec
Confidence 45668999999999743 478999999999999999999999999999
Q ss_pred CCCCCCccEEEEE
Q psy585 98 EELPGPYPHSLLK 110 (111)
Q Consensus 98 E~~~~~~~~~~iq 110 (111)
|++ +|+.+..++
T Consensus 234 En~-~g~~v~~v~ 245 (559)
T 3q2w_A 234 ENR-VDVIVANLT 245 (559)
T ss_dssp SSC-SSEEEEEEE
T ss_pred CCC-CCcEEEEEE
Confidence 997 688777664
No 3
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.92 E-value=1.5e-24 Score=156.13 Aligned_cols=108 Identities=20% Similarity=0.266 Sum_probs=90.6
Q ss_pred CEEEEEEEeCC----CccEEEEEEEEeeCCCCCCeecCCc--EEEEEEccCCCCCC------------------------
Q psy585 1 YELKLAASDNL----KENYTTVVIHVKDVNDNPPVFERPT--YRTQITEEDDRTLP------------------------ 50 (111)
Q Consensus 1 y~l~v~A~D~~----~~~~~~v~I~V~D~NDn~P~F~~~~--y~~~v~E~~~~~~~------------------------ 50 (111)
|.|.++|.|++ +++++.|.|.|.|+|||+|.|.+.. |.+.|+|+.+.|+.
T Consensus 71 ~~l~v~a~d~~~~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~ni~Y~i~~~~~ 150 (316)
T 3ubf_A 71 FWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHNIHYFIVRDRT 150 (316)
T ss_dssp EEEEEEC-------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCCEEEEEEEEES
T ss_pred EEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCceEEEEEeCCC
Confidence 57888899975 4789999999999999999999887 89999999766542
Q ss_pred ---------------------ceEeEEEEEEEEecCCc-------cceEEEEEEEeecCCCCCEEecCcceEEEECCCCC
Q psy585 51 ---------------------KRVLQYELTLVASDSLN-------ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPG 102 (111)
Q Consensus 51 ---------------------e~~~~y~l~v~a~d~~~-------~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~~~~ 102 (111)
|....|.|+|.|+|+|+ .++++++|.|.| |||+|.|.+..|.+.|+|++++
T Consensus 151 ~~~F~Id~~tG~i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~ 229 (316)
T 3ubf_A 151 GGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKK 229 (316)
T ss_dssp SSCEEECTTTCEEEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCT
T ss_pred CCEEEEECCccEEEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCC
Confidence 44568999999999873 367889999999 9999999999999999999999
Q ss_pred CccEEEE
Q psy585 103 PYPHSLL 109 (111)
Q Consensus 103 ~~~~~~i 109 (111)
|+.+..+
T Consensus 230 gt~v~~v 236 (316)
T 3ubf_A 230 DSDIISI 236 (316)
T ss_dssp TCEEEEC
T ss_pred CCEEEEE
Confidence 9877654
No 4
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.92 E-value=2.4e-24 Score=164.72 Aligned_cols=109 Identities=29% Similarity=0.381 Sum_probs=94.6
Q ss_pred CEEEEEEEeCC---CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCCC---------------------------
Q psy585 1 YELKLAASDNL---KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP--------------------------- 50 (111)
Q Consensus 1 y~l~v~A~D~~---~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~--------------------------- 50 (111)
|.|.++|+|++ +++++.+.|.|.|+|||+|.|.+..|.++|+|+.+.|+.
T Consensus 74 y~l~v~a~d~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~ 153 (550)
T 3q2v_A 74 YILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQ 153 (550)
T ss_dssp EEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEE
T ss_pred eEEEEEEEeCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecC
Confidence 78999999964 567899999999999999999999999999998532210
Q ss_pred ----------------------------ceEeEEEEEEEEecCCc---cceEEEEEEEeecCCCCCEEecCcceEEEECC
Q psy585 51 ----------------------------KRVLQYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEE 99 (111)
Q Consensus 51 ----------------------------e~~~~y~l~v~a~d~~~---~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~ 99 (111)
|.+..|.|+|+|+|+|. +++++|+|+|+|+|||+|.|.+..|.++|+|+
T Consensus 154 ~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En 233 (550)
T 3q2v_A 154 DPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN 233 (550)
T ss_dssp ESCCSSSCSEEECTTTCEEEECSSCCCTTTCSEEEEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEEEEEEESS
T ss_pred CCCCCcCCceEEcCCCeEEEEccCCCCcccCcEEEEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecceeEEEEecC
Confidence 45678999999999765 48899999999999999999999999999999
Q ss_pred CCCCccEEEEE
Q psy585 100 LPGPYPHSLLK 110 (111)
Q Consensus 100 ~~~~~~~~~iq 110 (111)
++|+.+..++
T Consensus 234 -~~g~~v~~v~ 243 (550)
T 3q2v_A 234 -EVNARIATLK 243 (550)
T ss_dssp -CSSCCCEEEC
T ss_pred -CCCCEEEEEE
Confidence 8888776653
No 5
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.91 E-value=4.1e-24 Score=163.42 Aligned_cols=109 Identities=28% Similarity=0.401 Sum_probs=94.4
Q ss_pred CEEEEEEEeCC---CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCC----------------C-----------
Q psy585 1 YELKLAASDNL---KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTL----------------P----------- 50 (111)
Q Consensus 1 y~l~v~A~D~~---~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~----------------~----------- 50 (111)
|.|.|+|+|+| +++++.|.|.|.|+|||+|.|.+..|.++|+|+.++|+ +
T Consensus 80 y~l~v~A~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~ 159 (546)
T 1l3w_A 80 YVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQ 159 (546)
T ss_dssp EEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEE
T ss_pred EEEEEEEEeCCCCcccceEEEEEEEEecccCcCEecCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCC
Confidence 78999999975 46789999999999999999999999999999842210 0
Q ss_pred ----------------------------ceEeEEEEEEEEecCCc---cceEEEEEEEeecCCCCCEEecCcceEEEECC
Q psy585 51 ----------------------------KRVLQYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEE 99 (111)
Q Consensus 51 ----------------------------e~~~~y~l~v~a~d~~~---~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~ 99 (111)
|....|.|+|+|+|+|. .++++|+|+|.|+|||+|.|.+..|.++|+|+
T Consensus 160 ~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En 239 (546)
T 1l3w_A 160 DPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN 239 (546)
T ss_dssp SSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS
T ss_pred CCCcccCCcEEEeCCCceEEEeccCCCcccCceEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeC
Confidence 44568999999999875 47889999999999999999999999999999
Q ss_pred CCCCccEEEEE
Q psy585 100 LPGPYPHSLLK 110 (111)
Q Consensus 100 ~~~~~~~~~iq 110 (111)
++|+.+..++
T Consensus 240 -~~gt~v~~v~ 249 (546)
T 1l3w_A 240 -EIGFEVQRLS 249 (546)
T ss_dssp -SCCCEEEEEC
T ss_pred -CCCCEEEEEE
Confidence 9998877664
No 6
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.90 E-value=2.2e-23 Score=155.01 Aligned_cols=108 Identities=20% Similarity=0.258 Sum_probs=91.0
Q ss_pred CEEEEEEEeCC------CccEEEEEEEEeeCCCCCCeecCCc--EEEEEEccCCCCCC----------------------
Q psy585 1 YELKLAASDNL------KENYTTVVIHVKDVNDNPPVFERPT--YRTQITEEDDRTLP---------------------- 50 (111)
Q Consensus 1 y~l~v~A~D~~------~~~~~~v~I~V~D~NDn~P~F~~~~--y~~~v~E~~~~~~~---------------------- 50 (111)
|.|.|+|+|+| +++.+.|.|.|.|+|||+|.|.+.. |.+.|+|+.++|+.
T Consensus 74 ~~~~V~a~d~g~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~y~i~~~ 153 (419)
T 3ubh_A 74 IDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHNIHYFIVRD 153 (419)
T ss_dssp EEEEEEEEC--CCSSSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSSTTCCEEEEEEEE
T ss_pred EEEEEEEEeCCCCCCCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCceeEEEEEeC
Confidence 67899999975 4577899999999999999999887 89999999765532
Q ss_pred -----------------------ceEeEEEEEEEEecCCc-------cceEEEEEEEeecCCCCCEEecCcceEEEECCC
Q psy585 51 -----------------------KRVLQYELTLVASDSLN-------ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEEL 100 (111)
Q Consensus 51 -----------------------e~~~~y~l~v~a~d~~~-------~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~~ 100 (111)
|....|.|+|+|+|+|. .++++++|.|.| |||+|.|.+..|.++|+||+
T Consensus 154 ~~~~~F~I~~~tG~i~~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~ 232 (419)
T 3ubh_A 154 RTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQ 232 (419)
T ss_dssp SSSSCEEECTTTCEEEECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTC
T ss_pred CCCCeEEEeCCceEEEEecccccccccEEEEEEEEEECCCCccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCC
Confidence 34468999999999864 356789999999 99999999999999999999
Q ss_pred CCCccEEEE
Q psy585 101 PGPYPHSLL 109 (111)
Q Consensus 101 ~~~~~~~~i 109 (111)
++|+.+..+
T Consensus 233 ~~gt~v~~v 241 (419)
T 3ubh_A 233 KKDSDIISI 241 (419)
T ss_dssp CTTCEEEEC
T ss_pred CCCcEEEEE
Confidence 999876654
No 7
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.90 E-value=6.1e-23 Score=156.98 Aligned_cols=107 Identities=28% Similarity=0.384 Sum_probs=94.5
Q ss_pred CEEEEEEEeC---CCccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCCC---------------------------
Q psy585 1 YELKLAASDN---LKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP--------------------------- 50 (111)
Q Consensus 1 y~l~v~A~D~---~~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~--------------------------- 50 (111)
|.|.|+|+|+ ++++++.|.|.|.|+|||+|.|.+..|.++|+|+ +.+..
T Consensus 187 y~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~~~ 265 (550)
T 3q2v_A 187 YTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVNDP 265 (550)
T ss_dssp EEEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESSCS
T ss_pred EEEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEeCC
Confidence 7899999996 4789999999999999999999999999999998 33221
Q ss_pred -------------------------ceEeEEEEEEEEecCCc------cceEEEEEEEeecCCCCCEEecCcceEEEECC
Q psy585 51 -------------------------KRVLQYELTLVASDSLN------ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEE 99 (111)
Q Consensus 51 -------------------------e~~~~y~l~v~a~d~~~------~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~ 99 (111)
|....|.|+|.|+|++. .++++|+|+|+|+|| +|.|.+..|.+.|+|+
T Consensus 266 ~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~ 344 (550)
T 3q2v_A 266 DQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVPED 344 (550)
T ss_dssp SCCEEEEECTTTCCEEEEESSCCCTTTCSEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETT
T ss_pred CCcEEEEecCCCccEEEEecccCCccccceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEEEEecC
Confidence 44668999999999862 478999999999999 9999999999999999
Q ss_pred CCCCccEEEE
Q psy585 100 LPGPYPHSLL 109 (111)
Q Consensus 100 ~~~~~~~~~i 109 (111)
+++|+.+..+
T Consensus 345 ~~~gt~v~~v 354 (550)
T 3q2v_A 345 FGVGQEITSY 354 (550)
T ss_dssp CCSSCEEEEC
T ss_pred CCCCCEEEEE
Confidence 9999887655
No 8
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.90 E-value=1.4e-23 Score=167.63 Aligned_cols=109 Identities=28% Similarity=0.401 Sum_probs=94.9
Q ss_pred CEEEEEEEeCC---CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCC----------------C-----------
Q psy585 1 YELKLAASDNL---KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTL----------------P----------- 50 (111)
Q Consensus 1 y~l~v~A~D~~---~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~----------------~----------- 50 (111)
|.|+|+|+|++ +++++.|.|+|.|+|||+|.|.+..|.++|+|+.+.|+ +
T Consensus 229 y~l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~ 308 (880)
T 1q55_A 229 YVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQ 308 (880)
T ss_dssp EEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEE
T ss_pred cEEEEEEEECCCCceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCC
Confidence 78999999975 46789999999999999999999999999999842211 0
Q ss_pred ----------------------------ceEeEEEEEEEEecCCc---cceEEEEEEEeecCCCCCEEecCcceEEEECC
Q psy585 51 ----------------------------KRVLQYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEE 99 (111)
Q Consensus 51 ----------------------------e~~~~y~l~v~a~d~~~---~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~ 99 (111)
|....|.|+|+|+|+|. +++++|+|+|.|+|||+|.|.+..|.++|+|+
T Consensus 309 ~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En 388 (880)
T 1q55_A 309 DPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN 388 (880)
T ss_dssp SSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS
T ss_pred CCCcccCCeEEEccCCccEEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecC
Confidence 45568999999999874 47889999999999999999999999999999
Q ss_pred CCCCccEEEEE
Q psy585 100 LPGPYPHSLLK 110 (111)
Q Consensus 100 ~~~~~~~~~iq 110 (111)
++|+.+..++
T Consensus 389 -~~gt~V~~v~ 398 (880)
T 1q55_A 389 -EIGFEVQRLS 398 (880)
T ss_dssp -SCCCEEEEEC
T ss_pred -CCCcEEEEEE
Confidence 9998887664
No 9
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.89 E-value=1.1e-22 Score=151.24 Aligned_cols=108 Identities=23% Similarity=0.369 Sum_probs=91.5
Q ss_pred CEEEEEEEeCC-------CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCCC-----------------------
Q psy585 1 YELKLAASDNL-------KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP----------------------- 50 (111)
Q Consensus 1 y~l~v~A~D~~-------~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~----------------------- 50 (111)
|.|+|+|+|+| +++++.+.|.|.| |||+|.|.+..|.++|+|+.++|+.
T Consensus 182 y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~dn~~i~Ysi~~~~~ 260 (419)
T 3ubh_A 182 YVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFADREIRYTLKAQGQ 260 (419)
T ss_dssp EEEEEEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTCCTTCEEEECCEECSSCCCCEEEEEESSS
T ss_pred EEEEEEEEECCCCccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCCCCCcEEEEEEEecCCCCceEEEEecCCC
Confidence 78999999974 3677889999999 9999999999999999999765431
Q ss_pred ----------------------ceE---eEEEEEEEEec-CCc-cceEEEEEEEeecCCCCCEEecCcceE-EEECCCCC
Q psy585 51 ----------------------KRV---LQYELTLVASD-SLN-ENKTTVVIHINDVNDMPPVFNTSLYPA-IMEEELPG 102 (111)
Q Consensus 51 ----------------------e~~---~~y~l~v~a~d-~~~-~~~~~v~I~V~D~Ndn~P~F~~~~y~~-~v~E~~~~ 102 (111)
|.. ..|.|+|.|+| ++. .++++|+|+|.|+|||+|.|.++.|.. .|+|++++
T Consensus 261 ~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~dd~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~ 340 (419)
T 3ubh_A 261 GAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPL 340 (419)
T ss_dssp CCSSEEECTTTCEEEECSCCCTTCTTSCSEEEEEEEEECTTTSCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCT
T ss_pred CCCcEEEECCCCEEEECcccCccccccccEEEEEEEEEeCCCCcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCC
Confidence 332 27999999995 333 578899999999999999999999997 89999999
Q ss_pred CccEEEE
Q psy585 103 PYPHSLL 109 (111)
Q Consensus 103 ~~~~~~i 109 (111)
|+.+..+
T Consensus 341 gt~v~~v 347 (419)
T 3ubh_A 341 GTSILRV 347 (419)
T ss_dssp TCEEEEC
T ss_pred CCEEEEE
Confidence 9877654
No 10
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.87 E-value=6.8e-22 Score=151.46 Aligned_cols=108 Identities=31% Similarity=0.410 Sum_probs=92.9
Q ss_pred CEEEEEEEeC-C-----CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCC-----------CCCC-------------
Q psy585 1 YELKLAASDN-L-----KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDD-----------RTLP------------- 50 (111)
Q Consensus 1 y~l~v~A~D~-~-----~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~-----------~~~~------------- 50 (111)
|.|.|+|+|+ | +++++.+.|.|.|+|||+|.|.+..|.+.|+|+.. ++..
T Consensus 186 y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~~g~~v~~v~a~D~D~~~~~n~~~~y~i~~ 265 (559)
T 3q2w_A 186 YTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENRVDVIVANLTVTDKDQPHTPAWNAAYRISG 265 (559)
T ss_dssp EEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSCSSEEEEEEEEECCSCTTSTTTSBCCEEEE
T ss_pred EEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCCCCcEEEEEEEEcCCCCCCCceeEEEEEec
Confidence 7899999996 2 68899999999999999999999999999999841 1100
Q ss_pred ----------------------------ceEeEEEEEEEEecCC---------ccceEEEEEEEeecCCCCCEEecCcce
Q psy585 51 ----------------------------KRVLQYELTLVASDSL---------NENKTTVVIHINDVNDMPPVFNTSLYP 93 (111)
Q Consensus 51 ----------------------------e~~~~y~l~v~a~d~~---------~~~~~~v~I~V~D~Ndn~P~F~~~~y~ 93 (111)
|....|.|+|.|+|++ ..++++|+|+|.|+|| +|.|.+..|.
T Consensus 266 g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~ 344 (559)
T 3q2w_A 266 GDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKI 344 (559)
T ss_dssp SCTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEE
T ss_pred CCCCCceEEEecCCCCcEEEEeCCCCCCccCceEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccceE
Confidence 4567899999999974 1478999999999999 6999999999
Q ss_pred EEEECCCCCCccEEEE
Q psy585 94 AIMEEELPGPYPHSLL 109 (111)
Q Consensus 94 ~~v~E~~~~~~~~~~i 109 (111)
+.|+|++++|+.+..+
T Consensus 345 ~~v~En~~~g~~v~~v 360 (559)
T 3q2w_A 345 IRQEEGLHAGTMLTTL 360 (559)
T ss_dssp EEEESCCCTTCEEEEC
T ss_pred EEEeCCCCCCCEEEEE
Confidence 9999999999877654
No 11
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.86 E-value=2.4e-22 Score=153.69 Aligned_cols=107 Identities=25% Similarity=0.396 Sum_probs=93.0
Q ss_pred CEEEEEEEeCC---CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCCC---------------------------
Q psy585 1 YELKLAASDNL---KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP--------------------------- 50 (111)
Q Consensus 1 y~l~v~A~D~~---~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~--------------------------- 50 (111)
|.|.|+|+|+| +++++.+.|.|.|+|||+|.|.+..|.++|+|+ +.|+.
T Consensus 193 y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~~~ 271 (546)
T 1l3w_A 193 YTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNE 271 (546)
T ss_dssp EEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCT
T ss_pred EEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEeCC
Confidence 78999999964 789999999999999999999999999999998 32210
Q ss_pred -------------------------ceEeEEEEEEEEecCCc------cceEEEEEEEeecCCCCCEEecCcceEEEECC
Q psy585 51 -------------------------KRVLQYELTLVASDSLN------ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEE 99 (111)
Q Consensus 51 -------------------------e~~~~y~l~v~a~d~~~------~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~ 99 (111)
|....|.|+|.|+|++. .++++|+|+|.|+|| +|.|.+..|.+.|+|+
T Consensus 272 ~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y~~~V~En 350 (546)
T 1l3w_A 272 GGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSED 350 (546)
T ss_dssp TSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTT
T ss_pred CceEEEEecCCCCeEEEEECccCCcccccEEEEEEEEEECCCCCCCCcceeEEEEEEEEcCCC-CCcEecceEEEEEeCC
Confidence 34568999999999762 478999999999999 9999999999999999
Q ss_pred CCCCccEEEE
Q psy585 100 LPGPYPHSLL 109 (111)
Q Consensus 100 ~~~~~~~~~i 109 (111)
+++|+.+..+
T Consensus 351 ~~~g~~v~~v 360 (546)
T 1l3w_A 351 LSRGEKIISL 360 (546)
T ss_dssp CCSSEEEEEC
T ss_pred CCCCCEEEEE
Confidence 9998876654
No 12
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.86 E-value=5.1e-21 Score=131.45 Aligned_cols=86 Identities=26% Similarity=0.366 Sum_probs=67.8
Q ss_pred CEEEEEEEeCC----CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCCC--------------------------
Q psy585 1 YELKLAASDNL----KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP-------------------------- 50 (111)
Q Consensus 1 y~l~v~A~D~~----~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~-------------------------- 50 (111)
|.|.|+|+|++ +++.+.+.|+|.|+|||+|.|.+..|.++|+|+.+.|+.
T Consensus 72 y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~ 151 (215)
T 2a4e_A 72 YTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILE 151 (215)
T ss_dssp EEEEEEEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEE
T ss_pred EEEEEEEEECCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeC
Confidence 78999999975 467889999999999999999999999999998533221
Q ss_pred -----------------------ceEeEEEEEEEEecCCc-----cceEEEEEEEeecCCCCCE
Q psy585 51 -----------------------KRVLQYELTLVASDSLN-----ENKTTVVIHINDVNDMPPV 86 (111)
Q Consensus 51 -----------------------e~~~~y~l~v~a~d~~~-----~~~~~v~I~V~D~Ndn~P~ 86 (111)
|....|.|.|.|+|+|. .++++|+|+|.|+|||+|+
T Consensus 152 ~~~~F~Id~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 152 GQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp STTTEEECTTTCEEEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEEEEEEEEEEC-------
T ss_pred CCCcEEEeCCccEEEEcccCCCcccCCEEEEEEEEEECCCCCCCceeEEEEEEEEEECCCCCCC
Confidence 45668999999999874 3789999999999999995
No 13
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.85 E-value=7.7e-22 Score=157.70 Aligned_cols=107 Identities=25% Similarity=0.396 Sum_probs=93.5
Q ss_pred CEEEEEEEeCC---CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCCC---------------------------
Q psy585 1 YELKLAASDNL---KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP--------------------------- 50 (111)
Q Consensus 1 y~l~v~A~D~~---~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~--------------------------- 50 (111)
|.|+|+|+|+| ++++++|.|+|.|+|||+|.|.+..|.++|+|+ +.|+.
T Consensus 342 y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~~~ 420 (880)
T 1q55_A 342 YTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNE 420 (880)
T ss_dssp EEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCT
T ss_pred eEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEecCC
Confidence 78999999964 789999999999999999999999999999998 32210
Q ss_pred -------------------------ceEeEEEEEEEEecCCc------cceEEEEEEEeecCCCCCEEecCcceEEEECC
Q psy585 51 -------------------------KRVLQYELTLVASDSLN------ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEE 99 (111)
Q Consensus 51 -------------------------e~~~~y~l~v~a~d~~~------~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~ 99 (111)
|....|.|+|.|+|++. .++++|+|+|.|+|| +|.|.+..|.+.|+|+
T Consensus 421 ~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~En 499 (880)
T 1q55_A 421 GGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSED 499 (880)
T ss_dssp TSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTT
T ss_pred CceEEEEecCCCceEEEecccCCCcccCCcEEEEEEEEECCCCCCCCcceeEEEEEEEEeCCC-CCEEecCceEEEEeCC
Confidence 34568999999999762 478999999999999 9999999999999999
Q ss_pred CCCCccEEEE
Q psy585 100 LPGPYPHSLL 109 (111)
Q Consensus 100 ~~~~~~~~~i 109 (111)
+++|+.+..+
T Consensus 500 ~~~Gt~V~~v 509 (880)
T 1q55_A 500 LSRGEKIISL 509 (880)
T ss_dssp CCSSEEEEEC
T ss_pred CCCCCEEEEE
Confidence 9998877654
No 14
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.85 E-value=1.2e-21 Score=136.88 Aligned_cols=87 Identities=18% Similarity=0.124 Sum_probs=72.3
Q ss_pred EEEEEEEeCC-----CccEEEEEEEEeeCCCCCCe----------ecCCcEEEEEEccCCCCCC----------------
Q psy585 2 ELKLAASDNL-----KENYTTVVIHVKDVNDNPPV----------FERPTYRTQITEEDDRTLP---------------- 50 (111)
Q Consensus 2 ~l~v~A~D~~-----~~~~~~v~I~V~D~NDn~P~----------F~~~~y~~~v~E~~~~~~~---------------- 50 (111)
.|+|.|+|+| +++++.|.|+|.|+|||+|. |.+..|.+.|+|+.++|+.
T Consensus 94 ~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~ 173 (246)
T 2x2u_A 94 YLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFHQFRLLPVQFLCPQIS 173 (246)
T ss_dssp EEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEEECSCHHHHHHCTTSC
T ss_pred EEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEEEEEEEEcCCCCCCcE
Confidence 8999999975 46788999999999999999 9999999999999765532
Q ss_pred ------------------------------ceEeEEEEEEEEec-CCc---cceEEEEEEEeecCCCCCEEe
Q psy585 51 ------------------------------KRVLQYELTLVASD-SLN---ENKTTVVIHINDVNDMPPVFN 88 (111)
Q Consensus 51 ------------------------------e~~~~y~l~v~a~d-~~~---~~~~~v~I~V~D~Ndn~P~F~ 88 (111)
|.+..|.|+|.|+| .|. .++++|.|+|+|+|||+|.|.
T Consensus 174 i~Y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg~p~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 174 VAYRLLEGEGLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp EEEEEESCTTSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC---CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred EEEEEccCCCCCEEEECCcCEEEeCCccCccccceEEEEEEEEecCCCCcceEEEEEEEEEEEeCCCCCccC
Confidence 56779999999887 333 478999999999999999995
No 15
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.84 E-value=2.4e-20 Score=127.48 Aligned_cols=84 Identities=31% Similarity=0.463 Sum_probs=75.3
Q ss_pred CEEEEEEEeCCCccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCCC------------------------------
Q psy585 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP------------------------------ 50 (111)
Q Consensus 1 y~l~v~A~D~~~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~------------------------------ 50 (111)
|.|.|+|+|++..+++.+.|.|.|+|||+|.|.+..|.+.|+|+.+.|+.
T Consensus 78 y~l~v~a~D~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~~~~F~I 157 (210)
T 3mvs_A 78 FTVEFSVSDHQGVITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPPSPFFAI 157 (210)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSCCSSEEE
T ss_pred EEEEEEEEeCCCCEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCCCCCEEE
Confidence 78999999998888899999999999999999999999999999765542
Q ss_pred ---------------ceEeEEEEEEEEecCCc----cceEEEEEEEeecCCCC
Q psy585 51 ---------------KRVLQYELTLVASDSLN----ENKTTVVIHINDVNDMP 84 (111)
Q Consensus 51 ---------------e~~~~y~l~v~a~d~~~----~~~~~v~I~V~D~Ndn~ 84 (111)
|....|.|+|.|+|+|+ +++++++|+|.|+||||
T Consensus 158 d~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 158 DSARGIVTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp CTTTCEEEECSCCCTTTCSEEEEEEEEEECCSSSCCEEEEEEEEEEECCCCCC
T ss_pred eCCcEEEEECCcCCCcccceEEEEEEEEECCCCCCCEEEEEEEEEEEccCCCC
Confidence 56779999999999984 47889999999999976
No 16
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.78 E-value=9.3e-19 Score=119.54 Aligned_cols=83 Identities=22% Similarity=0.344 Sum_probs=74.5
Q ss_pred CCCCeecCCcEE--EEEEccCCCCCC--------------------------------------------ceEeEEEEEE
Q psy585 27 DNPPVFERPTYR--TQITEEDDRTLP--------------------------------------------KRVLQYELTL 60 (111)
Q Consensus 27 Dn~P~F~~~~y~--~~v~E~~~~~~~--------------------------------------------e~~~~y~l~v 60 (111)
|++|.|.+..|. ++|+|+.+.|+. |....|.|+|
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~v 82 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDNDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEF 82 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTCCCCEEEEESHHHHHHEEECTTTCEEEESSCCCTTTCCEEEEEE
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCCCcEEEEEeCCCCCCcEEEeCCCCEEEECCccCCcccceEEEEE
Confidence 789999999997 799999766542 5678999999
Q ss_pred EEecCCccceEEEEEEEeecCCCCCEEecCcceEEEECCCCCCccEEEE
Q psy585 61 VASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLL 109 (111)
Q Consensus 61 ~a~d~~~~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~~~~~~~~~~i 109 (111)
.|+|++.+++++|.|+|.|+|||+|.|.+..|.+.|+|++++|+.+..+
T Consensus 83 ~a~D~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v 131 (210)
T 3mvs_A 83 SVSDHQGVITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIV 131 (210)
T ss_dssp EEECSSCEEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEEC
T ss_pred EEEeCCCCEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEE
Confidence 9999988889999999999999999999999999999999999877654
No 17
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=6.6e-19 Score=110.72 Aligned_cols=66 Identities=35% Similarity=0.509 Sum_probs=57.9
Q ss_pred EEEeeCCCCCCeecCCcEEEEEEccCCCCCC-------------------------------------------------
Q psy585 20 IHVKDVNDNPPVFERPTYRTQITEEDDRTLP------------------------------------------------- 50 (111)
Q Consensus 20 I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~------------------------------------------------- 50 (111)
++|+|+|||+|.|.+..|.++|+|+.+.|+.
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~ 81 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR 81 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence 4689999999999999999999999654431
Q ss_pred ceEeEEEEEEEEecCCcc---ceEEEEEEEeecCCCCC
Q psy585 51 KRVLQYELTLVASDSLNE---NKTTVVIHINDVNDMPP 85 (111)
Q Consensus 51 e~~~~y~l~v~a~d~~~~---~~~~v~I~V~D~Ndn~P 85 (111)
|....|.|+|.|+|+|.+ ++++|+|+|.|+|||+|
T Consensus 82 E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 82 EEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp TTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred ccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 556799999999999863 78999999999999998
No 18
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.74 E-value=9.3e-18 Score=120.66 Aligned_cols=83 Identities=24% Similarity=0.388 Sum_probs=67.2
Q ss_pred CEEEEEEEeCC-------CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCCC-----------------------
Q psy585 1 YELKLAASDNL-------KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP----------------------- 50 (111)
Q Consensus 1 y~l~v~A~D~~-------~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~----------------------- 50 (111)
|.|.|+|+|+| +++++.+.|.|.| |||+|.|.+..|.+.|+|+.+.|+.
T Consensus 177 y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~Dn~~i~Y~i~~~~~ 255 (316)
T 3ubf_A 177 YVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFADREIRYTLKAQGQ 255 (316)
T ss_dssp EEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTTCCCEEEEEEEESS
T ss_pred EEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCCCCEEEEEEEcCCC
Confidence 78999999975 4678899999999 9999999999999999999765432
Q ss_pred ----------------------ceE---eEEEEEEEEe-cCCc-cceEEEEEEEeecCCCC
Q psy585 51 ----------------------KRV---LQYELTLVAS-DSLN-ENKTTVVIHINDVNDMP 84 (111)
Q Consensus 51 ----------------------e~~---~~y~l~v~a~-d~~~-~~~~~v~I~V~D~Ndn~ 84 (111)
|.. ..|.|+|.|+ |+|. .++++|+|+|+|+||||
T Consensus 256 ~~~~F~Id~~tG~i~~~~~LD~E~~~~~~~y~l~V~A~dd~g~~~~~~~v~I~V~DvNDn~ 316 (316)
T 3ubf_A 256 GAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDVNDNA 316 (316)
T ss_dssp CTTTEEECTTTCEEEECSCCCSSCTTSCSEEEEEEEEEESSSSCEEEEEEEEEEECC----
T ss_pred CCCeEEEECCeEEEEECCcCCccccCCCceEEEEEEEEECCCCCEEEEEEEEEEEecCCCC
Confidence 444 6899999999 5554 58899999999999986
No 19
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.71 E-value=1e-16 Score=109.53 Aligned_cols=79 Identities=27% Similarity=0.351 Sum_probs=66.1
Q ss_pred CEEEEEEEeCC---CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCCC---------------------------
Q psy585 1 YELKLAASDNL---KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP--------------------------- 50 (111)
Q Consensus 1 y~l~v~A~D~~---~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~--------------------------- 50 (111)
|.|.|+|+|++ +++++.+.|.|.|+|||+|.|.+..|.+.|+|+.++|+.
T Consensus 74 y~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~ 153 (213)
T 3qrb_A 74 YILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQ 153 (213)
T ss_dssp EEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEE
T ss_pred EEEEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccC
Confidence 78999999975 578899999999999999999999999999998533211
Q ss_pred ----------------------------ceEeEEEEEEEEecCCc---cceEEEEEEEee
Q psy585 51 ----------------------------KRVLQYELTLVASDSLN---ENKTTVVIHIND 79 (111)
Q Consensus 51 ----------------------------e~~~~y~l~v~a~d~~~---~~~~~v~I~V~D 79 (111)
|....|.|.|.|+|+|. +++++|+|+|+|
T Consensus 154 ~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 154 DPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp ESCCSCSCSEEECTTTCEEEECSSCCCTTTCCEEEEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred CCCCCcCCeEEEECCCcEEEEccCCCCCccCceEEEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 44568999999999765 478888898887
No 20
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.70 E-value=2.1e-16 Score=107.42 Aligned_cols=79 Identities=28% Similarity=0.428 Sum_probs=67.0
Q ss_pred CEEEEEEEeCC----CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCCC--------------------------
Q psy585 1 YELKLAASDNL----KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP-------------------------- 50 (111)
Q Consensus 1 y~l~v~A~D~~----~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~-------------------------- 50 (111)
|.|+|+|+|+| +++.+.+.|.|.|+|||+|.|.+..|.++|+|+.+.|+.
T Consensus 69 y~l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~ 148 (203)
T 3ppe_A 69 YELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIK 148 (203)
T ss_dssp EEEEEEEEETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEE
T ss_pred EEEEEEEEECCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeC
Confidence 78999999985 578899999999999999999999999999998543221
Q ss_pred ----------------------ceEeEEEEEEEEecC-Cc---cceEEEEEEEee
Q psy585 51 ----------------------KRVLQYELTLVASDS-LN---ENKTTVVIHIND 79 (111)
Q Consensus 51 ----------------------e~~~~y~l~v~a~d~-~~---~~~~~v~I~V~D 79 (111)
|....|.|.|.|+|+ |. +++++|+|+|+|
T Consensus 149 ~~~~F~I~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 149 GNEYFTVDDSGVIFTARADLDRESQSAYEIIVKAKDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp STTTEEECTTSEEEESCSCCCTTTCSEEEEEEEEEETTCCCCSSSEEEEEEEEEC
T ss_pred CCCcEEEeCCeEEEECCcCCCcccCCEEEEEEEEEeCCCCCCCeEEEEEEEEEEC
Confidence 446689999999998 53 478999999987
No 21
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.69 E-value=1.4e-16 Score=109.15 Aligned_cols=79 Identities=33% Similarity=0.448 Sum_probs=64.8
Q ss_pred CEEEEEEEeCC---CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCCC---------------------------
Q psy585 1 YELKLAASDNL---KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP--------------------------- 50 (111)
Q Consensus 1 y~l~v~A~D~~---~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~--------------------------- 50 (111)
|.|+|+|+|+| +++++.+.|.|.|+|||+|.|.+..|.+.|+|+.+.|+.
T Consensus 74 y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~ 153 (215)
T 2qvi_A 74 FHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQA 153 (215)
T ss_dssp EEEEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECS
T ss_pred EEEEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCC
Confidence 78999999985 578899999999999999999999999999998532210
Q ss_pred ---------------------------ceEeEEEEEEEEecCCc------cceEEEEEEEee
Q psy585 51 ---------------------------KRVLQYELTLVASDSLN------ENKTTVVIHIND 79 (111)
Q Consensus 51 ---------------------------e~~~~y~l~v~a~d~~~------~~~~~v~I~V~D 79 (111)
|....|.|.|.|+|+|. +++++|.|+|+|
T Consensus 154 ~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 154 PSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp SCCSSTTCEEECTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred CCCCcCCeEEEcCCCcEEEEecCCCCcccCCeEEEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 34568889999998754 367888888876
No 22
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.69 E-value=2.7e-16 Score=107.81 Aligned_cols=79 Identities=28% Similarity=0.404 Sum_probs=66.1
Q ss_pred CEEEEEEEeCC---CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCCC---------------------------
Q psy585 1 YELKLAASDNL---KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP--------------------------- 50 (111)
Q Consensus 1 y~l~v~A~D~~---~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~--------------------------- 50 (111)
|.|+|+|+|+| +++++.+.|.|.|+|||+|.|.+..|.+.|+|+.+.|+.
T Consensus 74 y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~ 153 (218)
T 3k5r_A 74 YQLYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQT 153 (218)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEE
T ss_pred EEEEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCC
Confidence 78999999975 568899999999999999999999999999998543321
Q ss_pred -----------------------------ce--EeEEEEEEEEecCC--c---cceEEEEEEEee
Q psy585 51 -----------------------------KR--VLQYELTLVASDSL--N---ENKTTVVIHIND 79 (111)
Q Consensus 51 -----------------------------e~--~~~y~l~v~a~d~~--~---~~~~~v~I~V~D 79 (111)
|. ...|.|.|.|+|+| . +++++|+|+|.|
T Consensus 154 ~~~~~~~~F~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 154 PDKPSPNMFYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp SCCSCSCSEEECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred CCCCcCCEEEEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 34 45899999999988 2 478888888886
No 23
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.67 E-value=1e-16 Score=109.19 Aligned_cols=79 Identities=29% Similarity=0.440 Sum_probs=61.9
Q ss_pred CEEEEEEEeCC----CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCCC--------------------------
Q psy585 1 YELKLAASDNL----KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP-------------------------- 50 (111)
Q Consensus 1 y~l~v~A~D~~----~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~-------------------------- 50 (111)
|.|.|+|+|++ +++++.+.|.|.|+|||+|.|.+..|.+.|+|+.+.|+.
T Consensus 71 y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~ 150 (207)
T 3lnd_A 71 YILRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQ 150 (207)
T ss_dssp EEC----CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEE
T ss_pred EEEEEEEEECCCCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcC
Confidence 78999999974 578889999999999999999999999999998543221
Q ss_pred -----------------------ceEeEEEEEEEEecCCc-----cceEEEEEEEee
Q psy585 51 -----------------------KRVLQYELTLVASDSLN-----ENKTTVVIHIND 79 (111)
Q Consensus 51 -----------------------e~~~~y~l~v~a~d~~~-----~~~~~v~I~V~D 79 (111)
|....|.|.|.|+|+|. +++++|+|+|.|
T Consensus 151 ~~~~F~Id~~tG~i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 151 GQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp SGGGEEECTTTCEEEECCSSCCC--CCEEEEEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred CCCCEEEcCCCcEEEECcccCCcccCCEEEEEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 45678999999999863 478899999987
No 24
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=6.1e-16 Score=96.56 Aligned_cols=62 Identities=29% Similarity=0.370 Sum_probs=54.4
Q ss_pred EEEeeCCCCCCeecCCcEEEEEEccCCCCCC-------------------------------------------------
Q psy585 20 IHVKDVNDNPPVFERPTYRTQITEEDDRTLP------------------------------------------------- 50 (111)
Q Consensus 20 I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~------------------------------------------------- 50 (111)
|+|.|+|||+|.|.+..|.++|+|+.+.|+.
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD 81 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 81 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence 5789999999999999999999999755432
Q ss_pred -ceEeEEEEEEEEecCCc-cceEEEEEEEeecC
Q psy585 51 -KRVLQYELTLVASDSLN-ENKTTVVIHINDVN 81 (111)
Q Consensus 51 -e~~~~y~l~v~a~d~~~-~~~~~v~I~V~D~N 81 (111)
|....|.|+|.|+|+|. +++++|+|+|+|+|
T Consensus 82 ~E~~~~y~l~V~A~D~g~~~~~~~v~I~V~DvN 114 (114)
T 2ee0_A 82 REETAIHKVTVLASDGSSTPARATVTINVTDVN 114 (114)
T ss_dssp TTTCSEEEEEEEEESSSSSCEEEEEEEEEECCC
T ss_pred cccCcEEEEEEEEEECCCCceEEEEEEEEEECC
Confidence 56779999999999986 58899999999998
No 25
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.59 E-value=5.4e-15 Score=106.74 Aligned_cols=48 Identities=31% Similarity=0.450 Sum_probs=43.6
Q ss_pred CEEEEEEEeCC-----CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCC
Q psy585 1 YELKLAASDNL-----KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRT 48 (111)
Q Consensus 1 y~l~v~A~D~~-----~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~ 48 (111)
|.|.|+|+|+| +++++.|.|.|.|+|||+|.|.+..|.+.|+|+.+.|
T Consensus 179 y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~g 231 (322)
T 2a62_A 179 YLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLG 231 (322)
T ss_dssp EEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSC
T ss_pred EEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCC
Confidence 78999999975 6789999999999999999999999999999996544
No 26
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.57 E-value=1.2e-14 Score=98.69 Aligned_cols=59 Identities=24% Similarity=0.360 Sum_probs=53.5
Q ss_pred ceEeEEEEEEEEecCCc----cceEEEEEEEeecCCCCCEEecCcceEEEECCCCCCccEEEE
Q psy585 51 KRVLQYELTLVASDSLN----ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLL 109 (111)
Q Consensus 51 e~~~~y~l~v~a~d~~~----~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~~~~~~~~~~i 109 (111)
|....|.|+|.|+|+|. .++++|.|+|.|+|||+|.|.+..|.++|+|++++|+.+..+
T Consensus 64 E~~~~y~l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v 126 (203)
T 3ppe_A 64 EKKAEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKV 126 (203)
T ss_dssp TTCCEEEEEEEEEETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEEC
T ss_pred cccceEEEEEEEEECCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEE
Confidence 67789999999999985 367899999999999999999999999999999999877654
No 27
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.57 E-value=1.1e-14 Score=99.63 Aligned_cols=60 Identities=18% Similarity=0.288 Sum_probs=54.2
Q ss_pred ceEeEEEEEEEEecCCcc---ceEEEEEEEeecCCCCCEEecCcceEEEECCCCCCccEEEEE
Q psy585 51 KRVLQYELTLVASDSLNE---NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK 110 (111)
Q Consensus 51 e~~~~y~l~v~a~d~~~~---~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~~~~~~~~~~iq 110 (111)
|....|.|+|.|+|+|.+ ++++|.|+|.|+|||+|.|.+..|.+.|+|++++|+.+..++
T Consensus 69 E~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~ 131 (218)
T 3k5r_A 69 ETIATYQLYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMT 131 (218)
T ss_dssp TTCSEEEEEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECC
T ss_pred ccCCEEEEEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEE
Confidence 677899999999998863 778999999999999999999999999999999998876653
No 28
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.56 E-value=5.6e-14 Score=97.94 Aligned_cols=77 Identities=22% Similarity=0.376 Sum_probs=60.4
Q ss_pred EEEEEEeCC--CccEEEEEEEEeeCCCCCCeecCCcEEEEEEccCCCCCC------------------------------
Q psy585 3 LKLAASDNL--KENYTTVVIHVKDVNDNPPVFERPTYRTQITEEDDRTLP------------------------------ 50 (111)
Q Consensus 3 l~v~A~D~~--~~~~~~v~I~V~D~NDn~P~F~~~~y~~~v~E~~~~~~~------------------------------ 50 (111)
+.+.|.|++ ..+.+.|.|.|.|+|||+|.|.+..|.++|+|+.++|+.
T Consensus 96 ~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~ 175 (242)
T 4apx_B 96 VQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNP 175 (242)
T ss_dssp EEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCT
T ss_pred EEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecCC
Confidence 445555653 456778999999999999999999999999999655421
Q ss_pred ---------------------------ceEeEEEEEEEEecCCcc------ceEEEEEEEee
Q psy585 51 ---------------------------KRVLQYELTLVASDSLNE------NKTTVVIHIND 79 (111)
Q Consensus 51 ---------------------------e~~~~y~l~v~a~d~~~~------~~~~v~I~V~D 79 (111)
|....|.|.|+|+|+|.+ +.++|+|+|.-
T Consensus 176 ~~~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 176 EDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp TSTTHHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred CCcccccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcCchhcccCCceEEEEEee
Confidence 556789999999998863 45778887763
No 29
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.53 E-value=2.3e-15 Score=105.06 Aligned_cols=53 Identities=15% Similarity=0.035 Sum_probs=44.6
Q ss_pred EEEEEEecCCcc-----ceEEEEEEEeecCCCCCE----------EecCcceEEEECCCCCCccEEEE
Q psy585 57 ELTLVASDSLNE-----NKTTVVIHINDVNDMPPV----------FNTSLYPAIMEEELPGPYPHSLL 109 (111)
Q Consensus 57 ~l~v~a~d~~~~-----~~~~v~I~V~D~Ndn~P~----------F~~~~y~~~v~E~~~~~~~~~~i 109 (111)
.|+|.|+|+|.+ ++++|.|+|.|+|||+|. |.+..|.+.|+|++++|+.++.+
T Consensus 94 ~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v~~v 161 (246)
T 2x2u_A 94 YLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFHQFR 161 (246)
T ss_dssp EEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEEECS
T ss_pred EEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEEEEE
Confidence 999999998853 678999999999999999 99999999999999999877654
No 30
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.49 E-value=4.3e-14 Score=96.80 Aligned_cols=60 Identities=20% Similarity=0.229 Sum_probs=53.8
Q ss_pred ceEeEEEEEEEEecCCcc---ceEEEEEEEeecCCCCCEEecCcceEEEECCCCCCccEEEEE
Q psy585 51 KRVLQYELTLVASDSLNE---NKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK 110 (111)
Q Consensus 51 e~~~~y~l~v~a~d~~~~---~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~~~~~~~~~~iq 110 (111)
|....|.|+|.|+|+|.+ ++++|.|+|.|+|||+|.|.+..|.++|+|++++|+.+..++
T Consensus 69 E~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~ 131 (215)
T 2qvi_A 69 ELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVT 131 (215)
T ss_dssp TTCSEEEEEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECC
T ss_pred ccCCeEEEEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEE
Confidence 566899999999999863 678999999999999999999999999999999998776553
No 31
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.48 E-value=7.8e-14 Score=95.17 Aligned_cols=59 Identities=22% Similarity=0.267 Sum_probs=53.2
Q ss_pred ceEeEEEEEEEEecCCc---cceEEEEEEEeecCCCCCEEecCcceEEEECCCCCCccEEEE
Q psy585 51 KRVLQYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLL 109 (111)
Q Consensus 51 e~~~~y~l~v~a~d~~~---~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~~~~~~~~~~i 109 (111)
|....|.|+|.|+|++. .++++|.|+|.|+|||+|.|.+..|.+.|+|++++|+.+..+
T Consensus 69 E~~~~y~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v 130 (213)
T 3qrb_A 69 EAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKV 130 (213)
T ss_dssp TTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEEC
T ss_pred ccCceEEEEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEE
Confidence 66789999999999876 367999999999999999999999999999999999877654
No 32
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.47 E-value=1.4e-13 Score=94.36 Aligned_cols=59 Identities=25% Similarity=0.332 Sum_probs=52.6
Q ss_pred ceEeEEEEEEEEecCCc----cceEEEEEEEeecCCCCCEEecCcceEEEECCCCCCccEEEE
Q psy585 51 KRVLQYELTLVASDSLN----ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLL 109 (111)
Q Consensus 51 e~~~~y~l~v~a~d~~~----~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~~~~~~~~~~i 109 (111)
|....|.|+|.|+|++. .++++|.|+|.|+|||+|.|.+..|.++|+|++++|+.+..+
T Consensus 67 E~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v 129 (215)
T 2a4e_A 67 EERAQYTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQV 129 (215)
T ss_dssp TTCSEEEEEEEEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEEC
T ss_pred ccCCEEEEEEEEEECCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEE
Confidence 66789999999999874 367899999999999999999999999999999999877654
No 33
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.42 E-value=2.6e-13 Score=85.60 Aligned_cols=40 Identities=30% Similarity=0.366 Sum_probs=35.1
Q ss_pred ceEeEEEEEEEEecCCc---cceEEEEEEEeecCCCCCEEecC
Q psy585 51 KRVLQYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFNTS 90 (111)
Q Consensus 51 e~~~~y~l~v~a~d~~~---~~~~~v~I~V~D~Ndn~P~F~~~ 90 (111)
|....|.|+|.|+|+|. .++++|.|+|+|+|||+|.|.++
T Consensus 81 E~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~~ 123 (123)
T 2yqg_A 81 EETPFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQD 123 (123)
T ss_dssp TTBSEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCCC
T ss_pred ccCceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCCC
Confidence 56779999999999986 36789999999999999999753
No 34
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.40 E-value=1.4e-13 Score=93.61 Aligned_cols=59 Identities=24% Similarity=0.304 Sum_probs=49.0
Q ss_pred ceEeEEEEEEEEecCCc----cceEEEEEEEeecCCCCCEEecCcceEEEECCCCCCccEEEE
Q psy585 51 KRVLQYELTLVASDSLN----ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLL 109 (111)
Q Consensus 51 e~~~~y~l~v~a~d~~~----~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~~~~~~~~~~i 109 (111)
|....|.|+|.|+|++. .++++|.|+|.|+|||+|.|.+..|.+.|+|++++|+.+..+
T Consensus 66 E~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v 128 (207)
T 3lnd_A 66 EEKPVYILRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQV 128 (207)
T ss_dssp GGCCEEEC----CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEEC
T ss_pred ccCCEEEEEEEEEECCCCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEE
Confidence 67789999999999863 367889999999999999999999999999999999877654
No 35
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.36 E-value=8.7e-12 Score=86.83 Aligned_cols=52 Identities=21% Similarity=0.172 Sum_probs=43.3
Q ss_pred EEEEEEEEecCCc--cceEEEEEEEeecCCCCCEEecCcceEEEECCCCCCccE
Q psy585 55 QYELTLVASDSLN--ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEELPGPYPH 106 (111)
Q Consensus 55 ~y~l~v~a~d~~~--~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~~~~~~~~ 106 (111)
.+.+.+.+.+.+. .+.+.|+|.|.|+|||+|.|.+..|.+.|+|++++|+.+
T Consensus 93 ~~~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v 146 (242)
T 4apx_B 93 SIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTI 146 (242)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEE
T ss_pred EEEEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEE
Confidence 4556666666543 356789999999999999999999999999999999865
No 36
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.22 E-value=1.3e-11 Score=76.38 Aligned_cols=37 Identities=32% Similarity=0.477 Sum_probs=25.0
Q ss_pred ceEeEEEEEEEEecCCc---cceEEEEEEEeecCCCCCEE
Q psy585 51 KRVLQYELTLVASDSLN---ENKTTVVIHINDVNDMPPVF 87 (111)
Q Consensus 51 e~~~~y~l~v~a~d~~~---~~~~~v~I~V~D~Ndn~P~F 87 (111)
|....|.|+|.|+|+|. .++++|.|+|+|+|||+|.|
T Consensus 71 E~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 71 ELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp TTCCEEEEEEEEECTTSCBCSCCEEEEEEEC---------
T ss_pred ccCCeEEEEEEEEECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 67789999999999986 47899999999999999998
No 37
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.12 E-value=4.4e-12 Score=80.26 Aligned_cols=43 Identities=19% Similarity=0.038 Sum_probs=37.7
Q ss_pred eEEEEEEEEecCCccceEEEEEEEeecCCCCCEEecCcceEEE
Q psy585 54 LQYELTLVASDSLNENKTTVVIHINDVNDMPPVFNTSLYPAIM 96 (111)
Q Consensus 54 ~~y~l~v~a~d~~~~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v 96 (111)
..|.|.++|.+....+.++|.|+|+|+|||+|.|.++.|.+++
T Consensus 82 ~~y~l~v~a~~~~p~~~~~V~I~V~DvNDN~P~F~~~~y~vs~ 124 (125)
T 1wyj_A 82 NPCILHFQVLLKSPVQFIQGEIQLQDVNDHAPEFMEDESGPSS 124 (125)
T ss_dssp SSCCBCCEEEETTTTEEECCCEEECCCCCCCCCCCCCCCCCCC
T ss_pred CcEEEEEEEEECCCCeEEEEEEEEEEccCCCCcCCCcEEEEec
Confidence 7899999999865557889999999999999999999998653
No 38
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.92 E-value=2.5e-10 Score=70.85 Aligned_cols=36 Identities=22% Similarity=0.155 Sum_probs=32.2
Q ss_pred EEEeecCCCCCEEecCcceEEEECCCCCCccEEEEE
Q psy585 75 IHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLLK 110 (111)
Q Consensus 75 I~V~D~Ndn~P~F~~~~y~~~v~E~~~~~~~~~~iq 110 (111)
|+|.|+|||+|.|.+..|.++|+|++++|+.+..++
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~ 37 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLH 37 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEE
Confidence 578999999999999999999999999998776543
No 39
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=98.86 E-value=2.5e-10 Score=72.11 Aligned_cols=40 Identities=20% Similarity=0.233 Sum_probs=34.8
Q ss_pred CEEEEEEEeCCCccEEEEEEEEeeCCCCCCeecCCcEEEE
Q psy585 1 YELKLAASDNLKENYTTVVIHVKDVNDNPPVFERPTYRTQ 40 (111)
Q Consensus 1 y~l~v~A~D~~~~~~~~v~I~V~D~NDn~P~F~~~~y~~~ 40 (111)
|.|.++|.++.....+.|.|.|+|+|||+|.|.++.|.++
T Consensus 84 y~l~v~a~~~~p~~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 84 CILHFQVLLKSPVQFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp CCBCCEEEETTTTEEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEEEECCCCeEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 6788999987655688999999999999999999998765
No 40
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.83 E-value=7.5e-10 Score=69.06 Aligned_cols=35 Identities=29% Similarity=0.267 Sum_probs=31.8
Q ss_pred EEEeecCCCCCEEecCcceEEEECCCCCCccEEEE
Q psy585 75 IHINDVNDMPPVFNTSLYPAIMEEELPGPYPHSLL 109 (111)
Q Consensus 75 I~V~D~Ndn~P~F~~~~y~~~v~E~~~~~~~~~~i 109 (111)
++|.|+|||+|.|.+..|.++|+|++++|+.+..+
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v 36 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQL 36 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEEC
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEE
Confidence 46899999999999999999999999999877654
No 41
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=97.43 E-value=0.00041 Score=41.79 Aligned_cols=27 Identities=19% Similarity=0.301 Sum_probs=20.1
Q ss_pred EEEEEEEEecCCccceEEEEEEEeecCCC
Q psy585 55 QYELTLVASDSLNENKTTVVIHINDVNDM 83 (111)
Q Consensus 55 ~y~l~v~a~d~~~~~~~~v~I~V~D~Ndn 83 (111)
.|.+.+.+.+ ....++|.|.|+|+|||
T Consensus 77 ~~~~~v~~~~--p~~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 77 SIHLEVIVDR--PLQVFHVEVEVRDINDN 103 (103)
T ss_dssp EEEEEEEETT--TTEEEEEEEEEECCSCC
T ss_pred EEEEEEEECC--CCEEEEEEEEEEEcCCC
Confidence 5566666543 23588999999999997
No 42
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=97.34 E-value=0.00023 Score=43.06 Aligned_cols=30 Identities=23% Similarity=0.356 Sum_probs=25.9
Q ss_pred ceEeEEEEEEEEecCCcc---ceEEEEEEEeec
Q psy585 51 KRVLQYELTLVASDSLNE---NKTTVVIHINDV 80 (111)
Q Consensus 51 e~~~~y~l~v~a~d~~~~---~~~~v~I~V~D~ 80 (111)
|.+..|.|+|.|+|+|.+ ++++|.|+|+|+
T Consensus 73 E~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 73 ERIATYTLFSHAVSSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp TTCCEEEEEEEEECTTSCBSSCCEEEEEEEEC-
T ss_pred CCCCeEEEEEEEEECCCCceeeEEEEEEEEEeC
Confidence 677899999999999873 679999999985
No 43
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=97.05 E-value=0.00077 Score=40.33 Aligned_cols=29 Identities=14% Similarity=0.318 Sum_probs=25.3
Q ss_pred ceEeEEEEEEEEecCCcc---ceEEEEEEEee
Q psy585 51 KRVLQYELTLVASDSLNE---NKTTVVIHIND 79 (111)
Q Consensus 51 e~~~~y~l~v~a~d~~~~---~~~~v~I~V~D 79 (111)
|....|.|+|+|+|+|.+ +.++|.|+|+|
T Consensus 69 E~~~~y~l~V~A~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 69 ETIATYQLYVETTDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp TTCSEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred cCCCEEEEEEEEEECCCCcccceEEEEEEEEC
Confidence 677899999999999874 67899999987
No 44
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=96.99 E-value=0.00097 Score=39.82 Aligned_cols=29 Identities=17% Similarity=0.316 Sum_probs=25.1
Q ss_pred ceEeEEEEEEEEecCCcc---ceEEEEEEEee
Q psy585 51 KRVLQYELTLVASDSLNE---NKTTVVIHIND 79 (111)
Q Consensus 51 e~~~~y~l~v~a~d~~~~---~~~~v~I~V~D 79 (111)
|.+..|.|+|.|+|+|.+ +.++|.|+|+|
T Consensus 68 E~~~~y~l~V~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 68 EAIPSYQLQVETTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp TTCCEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred ccCceEEEEEEEEECCCCceeeEEEEEEEEEC
Confidence 677899999999999874 67889999987
No 45
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=96.96 E-value=0.001 Score=39.63 Aligned_cols=29 Identities=21% Similarity=0.339 Sum_probs=25.3
Q ss_pred ceEeEEEEEEEEecCCcc---ceEEEEEEEee
Q psy585 51 KRVLQYELTLVASDSLNE---NKTTVVIHIND 79 (111)
Q Consensus 51 e~~~~y~l~v~a~d~~~~---~~~~v~I~V~D 79 (111)
|....|.|+|+|+|+|.+ +.++|.|.|+|
T Consensus 68 E~~~~y~l~v~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 68 EAIANYELEVEVTDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp TTCCEEEEEEEEEETTSCEEEEEEEEEEEEEC
T ss_pred ccCCEEEEEEEEEECCCCceeeeEEEEEEEEC
Confidence 677899999999999874 67889999987
No 46
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=96.88 E-value=0.0012 Score=39.58 Aligned_cols=29 Identities=31% Similarity=0.399 Sum_probs=25.1
Q ss_pred ceEeEEEEEEEEecCCc----cceEEEEEEEee
Q psy585 51 KRVLQYELTLVASDSLN----ENKTTVVIHIND 79 (111)
Q Consensus 51 e~~~~y~l~v~a~d~~~----~~~~~v~I~V~D 79 (111)
|.+..|.|+|.|+|+|. .++++|.|+|.|
T Consensus 67 E~~~~y~l~V~A~D~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 67 EERSQYTLRAQALDRRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp TTCSEEEEEEEEEETTTCCBSSCCEEEEEEEEC
T ss_pred ccCCeEEEEEEEEECCCCCCcceeEEEEEEEeC
Confidence 77889999999999983 378999999987
No 47
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=96.86 E-value=0.0011 Score=39.65 Aligned_cols=29 Identities=28% Similarity=0.377 Sum_probs=25.2
Q ss_pred ceEeEEEEEEEEecCCc----cceEEEEEEEee
Q psy585 51 KRVLQYELTLVASDSLN----ENKTTVVIHIND 79 (111)
Q Consensus 51 e~~~~y~l~v~a~d~~~----~~~~~v~I~V~D 79 (111)
|.+..|.|+|.|+|+|. .++++|.|+|+|
T Consensus 66 E~~~~y~l~v~A~D~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 66 EEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp TTCSEEEEEEEEEETTTCCBSSCCEEEEEEECC
T ss_pred cCCCeEEEEEEEEECCCCCCcceeEEEEEEEEC
Confidence 67789999999999885 378999999987
No 48
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.11 E-value=1 Score=26.56 Aligned_cols=29 Identities=21% Similarity=0.365 Sum_probs=24.2
Q ss_pred eEEEEEEEEecCCc-cceEEEEEEEeecCC
Q psy585 54 LQYELTLVASDSLN-ENKTTVVIHINDVND 82 (111)
Q Consensus 54 ~~y~l~v~a~d~~~-~~~~~v~I~V~D~Nd 82 (111)
..|.|++.++|..+ .++.++.|+|...+.
T Consensus 69 G~y~f~LTVtD~~G~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 69 GTYVFTLTVKDERNLQSQSSVNVIVKEESG 98 (102)
T ss_dssp SEEEEEEEEEBTTCCEEEEEEEEEEECCSS
T ss_pred eEEEEEEEEEeCCCCEEEeEEEEEEcCCCC
Confidence 58999999999764 688899999987665
No 49
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=86.73 E-value=4.9 Score=26.25 Aligned_cols=29 Identities=24% Similarity=0.123 Sum_probs=18.9
Q ss_pred CEEEEEEEeC-CCccE-EEEEEEEeeCCCCCCe
Q psy585 1 YELKLAASDN-LKENY-TTVVIHVKDVNDNPPV 31 (111)
Q Consensus 1 y~l~v~A~D~-~~~~~-~~v~I~V~D~NDn~P~ 31 (111)
|.|+++|+|. |..+. ..+.|.|.+ ..+|.
T Consensus 63 htlta~A~D~aGn~s~s~~v~vtV~~--~~~Pt 93 (190)
T 3pdd_A 63 YNLKAVAVLSDGRRIESPVTPVLVKV--IVKPT 93 (190)
T ss_dssp EEEEEEEEETTSCEEECCCEEEEEEC--CCCCE
T ss_pred EEEEEEEEECCCCEeeecceeEEecc--CCCCc
Confidence 6899999996 44322 346677665 44664
No 50
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=68.84 E-value=8.4 Score=23.71 Aligned_cols=49 Identities=16% Similarity=0.087 Sum_probs=16.9
Q ss_pred CCceEeEEEEEEEEecCCc----cceEEEEEEEeecCCCCCEEecCcceEEEECCC
Q psy585 49 LPKRVLQYELTLVASDSLN----ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEEL 100 (111)
Q Consensus 49 ~~e~~~~y~l~v~a~d~~~----~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~~ 100 (111)
..|....|.+.+.-...+. ++.++|+| .| +|.+|.|....-...+.|+.
T Consensus 81 ~~E~~E~F~v~L~~p~~~a~lg~~~~atvtI--~d-dD~~g~~~f~~~~~~V~E~~ 133 (137)
T 3ead_A 81 VFEEDECFYIRLFNPSEGVKLAVPMIATVMI--LD-DDHAGIFAFTDSVFEITESV 133 (137)
T ss_dssp SCCCCEEEEEEEECCCTTCEECSCSEEEEEE--EC-CC------------------
T ss_pred cccCcEEEEEEEECCCCCcEECCCcEEEEEE--EC-CCCCCEEEECCCcEEEeccc
Confidence 3455667777766543232 35566555 55 36688876665566777764
No 51
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=67.56 E-value=12 Score=20.85 Aligned_cols=27 Identities=22% Similarity=0.362 Sum_probs=20.3
Q ss_pred eEeEEEEEEEEecCCc-cceEEEEEEEe
Q psy585 52 RVLQYELTLVASDSLN-ENKTTVVIHIN 78 (111)
Q Consensus 52 ~~~~y~l~v~a~d~~~-~~~~~v~I~V~ 78 (111)
....|.+++.++|..+ .++.++.|.|.
T Consensus 57 ~~G~Y~v~LtVtd~~G~~~t~~~~V~V~ 84 (85)
T 2y72_A 57 KAGTYNVTLKVTDDKGATATESFTIEIK 84 (85)
T ss_dssp SCEEEEEEEEEEETTSCEEEEEEEEEEE
T ss_pred CCeEEEEEEEEEECCCCEEEEEEEEEEc
Confidence 3468999999999754 56677777775
No 52
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=66.13 E-value=13 Score=21.75 Aligned_cols=27 Identities=19% Similarity=0.260 Sum_probs=20.6
Q ss_pred EeEEEEEEEEecCCc--cceEEEEEEEee
Q psy585 53 VLQYELTLVASDSLN--ENKTTVVIHIND 79 (111)
Q Consensus 53 ~~~y~l~v~a~d~~~--~~~~~v~I~V~D 79 (111)
...|+|+++|.|..+ .....|.|+|.+
T Consensus 60 ~G~htl~a~AtD~~G~~~tS~~v~vtV~~ 88 (98)
T 3pe9_A 60 EGNHEISVIAYDDDDAASTPDSVKIFVKQ 88 (98)
T ss_dssp SEEEEEEEEEEETTCCBCCCEEEEEEEEC
T ss_pred CccEEEEEEEEECCCCEEeeeEEEEEECc
Confidence 378999999999765 246677887763
No 53
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=63.79 E-value=15 Score=21.68 Aligned_cols=30 Identities=20% Similarity=0.192 Sum_probs=20.7
Q ss_pred CEEEEEEEeC-CCccEEEEEEEEeeCCCCCC
Q psy585 1 YELKLAASDN-LKENYTTVVIHVKDVNDNPP 30 (111)
Q Consensus 1 y~l~v~A~D~-~~~~~~~v~I~V~D~NDn~P 30 (111)
|.++-.++|. |..++.+..|.|.+.....|
T Consensus 61 Y~VtY~VtDs~Gn~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 61 YVLTYTVTDSKGHEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEECSSCCCC
T ss_pred EEEEEEEEcCCCCEEEEEEEEEEeCCCcccC
Confidence 6777888885 56677777777777554433
No 54
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=55.47 E-value=30 Score=20.42 Aligned_cols=34 Identities=18% Similarity=0.235 Sum_probs=25.9
Q ss_pred eEeEEEEEEEEecCCc-cceEEEEEEEeecCCCCC
Q psy585 52 RVLQYELTLVASDSLN-ENKTTVVIHINDVNDMPP 85 (111)
Q Consensus 52 ~~~~y~l~v~a~d~~~-~~~~~v~I~V~D~Ndn~P 85 (111)
+...|.++-.++|..+ .++++.+|.|.+-.+..|
T Consensus 57 k~G~Y~VtY~VtDs~Gn~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 57 KAGTYVLTYTVTDSKGHEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp SCEEEEEEEEEECTTSCEEEEEEEEEEECSSCCCC
T ss_pred CceEEEEEEEEEcCCCCEEEEEEEEEEeCCCcccC
Confidence 4579999999999765 577888888887665433
No 55
>1b4r_A Protein (PKD1_human); PKD domain 1 from human polycystein-1, polycystin (precursor), membrane protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=52.17 E-value=29 Score=19.41 Aligned_cols=26 Identities=12% Similarity=0.083 Sum_probs=19.4
Q ss_pred EeEEEEEEEEecCCccceEEEEEEEe
Q psy585 53 VLQYELTLVASDSLNENKTTVVIHIN 78 (111)
Q Consensus 53 ~~~y~l~v~a~d~~~~~~~~v~I~V~ 78 (111)
...|.+++.+++++..+.+...|+|.
T Consensus 54 ~G~YtV~Ltv~~g~~~~~a~~~V~V~ 79 (80)
T 1b4r_A 54 PGRYHVTAVLALGAGSALLGTDVQVE 79 (80)
T ss_dssp SEEEEEEEEEECSSCEEEEEEEEEEB
T ss_pred CcEEEEEEEEEeCCceEEEEEEEEEE
Confidence 46899999999776667776666663
No 56
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=40.88 E-value=17 Score=22.65 Aligned_cols=27 Identities=22% Similarity=0.409 Sum_probs=20.0
Q ss_pred EEEEEecCCc--c-ceEEEEEEEeecCCCC
Q psy585 58 LTLVASDSLN--E-NKTTVVIHINDVNDMP 84 (111)
Q Consensus 58 l~v~a~d~~~--~-~~~~v~I~V~D~Ndn~ 84 (111)
|++.-.|... | ..|+|++.|.|+|.||
T Consensus 50 LtvisiDk~vL~PGESA~it~IvKDid~nP 79 (146)
T 2lv4_A 50 LTVMSIDKSVLSPGESATITTIVKDIDGNP 79 (146)
T ss_dssp GCEEECCCCCBCTTCEEEEEEECBBTTSCB
T ss_pred cEEEecCccccCCCcceEEEEEEEeCCCCc
Confidence 5566666543 3 5789999999999855
No 57
>2kzw_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina mazei}
Probab=36.76 E-value=66 Score=20.01 Aligned_cols=29 Identities=17% Similarity=0.284 Sum_probs=22.9
Q ss_pred eEeEEEEEEEEecCCccceEEEEEEEeec
Q psy585 52 RVLQYELTLVASDSLNENKTTVVIHINDV 80 (111)
Q Consensus 52 ~~~~y~l~v~a~d~~~~~~~~v~I~V~D~ 80 (111)
....|++++.++|..+....+..+.|+.-
T Consensus 112 ~~G~YtVtLtvtn~~G~~~~t~~~~i~~~ 140 (145)
T 2kzw_A 112 NEGEYIVSLIVSNENDSDSASVTIRALEH 140 (145)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEEEEEECT
T ss_pred CCcEEEEEEEEEcCCCCeeEEEeeeeeec
Confidence 45789999999998777777777777753
No 58
>3ima_B Cysteine proteinase inhibitor; cystatin, tarocystatin, cecpi, papain, phytocystatin, allergen, disulfide bond, hydrolase, protease; 2.03A {Colocasia esculenta} SCOP: d.17.1.0
Probab=35.90 E-value=37 Score=19.15 Aligned_cols=21 Identities=10% Similarity=0.064 Sum_probs=12.0
Q ss_pred CEEEEEEEeCCCccEEEEEEE
Q psy585 1 YELKLAASDNLKENYTTVVIH 21 (111)
Q Consensus 1 y~l~v~A~D~~~~~~~~v~I~ 21 (111)
|.|++.+.|++....+.+.|-
T Consensus 55 Y~l~v~~~~~~~~~~y~a~V~ 75 (91)
T 3ima_B 55 HHLTVEVIEGGKKKVYEAKVW 75 (91)
T ss_dssp EEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEEecCCceEEEEEEEE
Confidence 566777777654444444443
No 59
>1wgo_A VPS10 domain-containing receptor sorcs2; polycystic kidney disease, PKD, structural genomics, KIAA1329 protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=35.59 E-value=39 Score=20.74 Aligned_cols=28 Identities=7% Similarity=0.291 Sum_probs=23.7
Q ss_pred ceEeEEEEEEEEecCCccceEEEEEEEe
Q psy585 51 KRVLQYELTLVASDSLNENKTTVVIHIN 78 (111)
Q Consensus 51 e~~~~y~l~v~a~d~~~~~~~~v~I~V~ 78 (111)
+....|.+++.|.+..+.+++.+.++|.
T Consensus 91 ~~~GiyrVt~~AeN~~G~d~a~l~l~Vt 118 (123)
T 1wgo_A 91 ESPGIYRVSVRAENTAGHDEAVLFVQVS 118 (123)
T ss_dssp SSCSCEEEEEEEECSSCEEEEEEEECBC
T ss_pred eCCCEEEEEEEEEccCCceeEEEEEEEe
Confidence 3456899999999998899999988875
No 60
>2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.34 E-value=26 Score=21.21 Aligned_cols=26 Identities=15% Similarity=0.120 Sum_probs=18.2
Q ss_pred EeEEEEEEEEecCCccceEEEEEEEe
Q psy585 53 VLQYELTLVASDSLNENKTTVVIHIN 78 (111)
Q Consensus 53 ~~~y~l~v~a~d~~~~~~~~v~I~V~ 78 (111)
...|.|++.++|..+.+...+.|+|+
T Consensus 79 eG~Y~FqltVtd~~~~ge~~vnVTV~ 104 (113)
T 2e7m_A 79 VGLYVFKVTVSSENAFGEGFVNVTVK 104 (113)
T ss_dssp SEEEEECCEEEETTEEEECCEEEEEE
T ss_pred cEEEEEEEEEECCCCCccceEEEEEc
Confidence 36888888888876655555666665
No 61
>1jh4_B PAIP1, polyadenylate-binding protein-interacting protein-1; all-helical domain, protein-peptide complex, RNA binding protein; NMR {Homo sapiens} PDB: 3ntw_B
Probab=32.88 E-value=12 Score=16.42 Aligned_cols=13 Identities=31% Similarity=0.347 Sum_probs=10.6
Q ss_pred CCCCCEEecCcce
Q psy585 81 NDMPPVFNTSLYP 93 (111)
Q Consensus 81 Ndn~P~F~~~~y~ 93 (111)
.-++|+|-+..|.
T Consensus 7 S~~ApeF~Psgys 19 (26)
T 1jh4_B 7 SVNAPEFYPSGYS 19 (26)
T ss_dssp SCCCSCCCCTTCC
T ss_pred CcCCceeccCccc
Confidence 3479999998887
No 62
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=32.49 E-value=1.3e+02 Score=21.00 Aligned_cols=51 Identities=12% Similarity=0.049 Sum_probs=31.9
Q ss_pred CCceEeEEEEEEEEecCCc--cceEEEEEEEeecCCCCCEEecCcceEEEECCC
Q psy585 49 LPKRVLQYELTLVASDSLN--ENKTTVVIHINDVNDMPPVFNTSLYPAIMEEEL 100 (111)
Q Consensus 49 ~~e~~~~y~l~v~a~d~~~--~~~~~v~I~V~D~Ndn~P~F~~~~y~~~v~E~~ 100 (111)
..|....|.+.+....++. ....+.+|+|.| ||.+|.|....-..++.|+.
T Consensus 86 ~~E~dEtF~v~Ls~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~ 138 (298)
T 3rb5_A 86 VFEEDECFYIRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV 138 (298)
T ss_dssp SCCCCEEEEEEEECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC
T ss_pred CccCcEEEEEEEeCCCCCcEECCCceEEEEEec-cccccccccccccEEeecCC
Confidence 3465667777776543332 122344555566 67799987766677888985
No 63
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=27.82 E-value=71 Score=21.94 Aligned_cols=26 Identities=31% Similarity=0.402 Sum_probs=20.2
Q ss_pred CEEEEEEEeC-CCccEEEEEEEEeeCC
Q psy585 1 YELKLAASDN-LKENYTTVVIHVKDVN 26 (111)
Q Consensus 1 y~l~v~A~D~-~~~~~~~v~I~V~D~N 26 (111)
|++++.++|. |.+++.+..|.|....
T Consensus 71 YtVtLTVtD~~G~s~t~t~~ItV~~~~ 97 (260)
T 2c4x_A 71 YKVKLIVTDNQGASSSFTATIKVTSAT 97 (260)
T ss_dssp EEEEEEEEETTSCEEEEEEEEEEBCSS
T ss_pred EEEEEEEEeCCCCeEEEEEEEEECCCC
Confidence 7889999996 5666778888887643
No 64
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=27.69 E-value=1.5e+02 Score=20.34 Aligned_cols=32 Identities=13% Similarity=0.088 Sum_probs=20.5
Q ss_pred ceEeEEEEEEEEecC---Cc---cceEEEEEEEe--ecCC
Q psy585 51 KRVLQYELTLVASDS---LN---ENKTTVVIHIN--DVND 82 (111)
Q Consensus 51 e~~~~y~l~v~a~d~---~~---~~~~~v~I~V~--D~Nd 82 (111)
.....|.+.|.|.+. |. .++....|.|. |.||
T Consensus 65 ~D~G~~~i~VtA~~~~~~g~~~~~asdvF~I~V~ped~~e 104 (246)
T 1u2c_A 65 TDKGVHYISVSAARLGANGSHVPQTSSVFSIEVYPEDHNE 104 (246)
T ss_dssp GGCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEESSCCC-
T ss_pred CCcceEEEEEEEeeccCCCCccccccceEEEEEecCCCcc
Confidence 345689999999743 22 24455667777 7777
No 65
>1eqk_A Oryzacystatin-I; alpha and beta proteins, cystatin-like fold, cystatin/monellin superfamily, phytocystatin family; NMR {Oryza sativa japonica group} SCOP: d.17.1.2
Probab=25.23 E-value=83 Score=17.94 Aligned_cols=22 Identities=5% Similarity=0.119 Sum_probs=12.5
Q ss_pred CEEEEEEEeCCCccEEEEEEEE
Q psy585 1 YELKLAASDNLKENYTTVVIHV 22 (111)
Q Consensus 1 y~l~v~A~D~~~~~~~~v~I~V 22 (111)
|.|++.+.|++....+.+.|-.
T Consensus 60 Y~l~v~~~~~~~~~~c~~~V~~ 81 (102)
T 1eqk_A 60 YYFTIEVKEGDAKKLYEAKVWE 81 (102)
T ss_dssp EEEEEEEEETTCCEEEEEEEEE
T ss_pred EEEEEEEecCCCcEEEEEEEEE
Confidence 5666667666554445554443
No 66
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=24.84 E-value=80 Score=24.25 Aligned_cols=31 Identities=19% Similarity=0.289 Sum_probs=22.7
Q ss_pred EeEEEEEEEEecCCc---cceEEEEEEEeecCCCCCEEe
Q psy585 53 VLQYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFN 88 (111)
Q Consensus 53 ~~~y~l~v~a~d~~~---~~~~~v~I~V~D~Ndn~P~F~ 88 (111)
...|+|+|+|.+..+ ...+++.|.|. ||...
T Consensus 719 pG~Y~f~V~a~~~~g~w~~~~~~l~I~I~-----Pp~~~ 752 (758)
T 3ott_A 719 YGNYQLIISKLERDGQPSNRPHILNIRIL-----PPWLE 752 (758)
T ss_dssp SEEEEEEEEEBCTTSCBCSSCEEEEEEEC-----CGGGG
T ss_pred CccEEEEEEEeCCCCCccCccEEEEEEEC-----Ccchh
Confidence 358999999998654 34677888886 66543
No 67
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=23.41 E-value=1.1e+02 Score=22.74 Aligned_cols=25 Identities=20% Similarity=0.149 Sum_probs=19.0
Q ss_pred EeEEEEEEEEecCCc---cceEEEEEEE
Q psy585 53 VLQYELTLVASDSLN---ENKTTVVIHI 77 (111)
Q Consensus 53 ~~~y~l~v~a~d~~~---~~~~~v~I~V 77 (111)
...|.|+++++|.+. ++..+|.|+|
T Consensus 409 ~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 409 GKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp TCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred CcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 357999999999874 4666777776
No 68
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=22.00 E-value=1.1e+02 Score=23.72 Aligned_cols=31 Identities=19% Similarity=0.195 Sum_probs=22.1
Q ss_pred EeEEEEEEEEecCCc---cceEEEEEEEeecCCCCCEEe
Q psy585 53 VLQYELTLVASDSLN---ENKTTVVIHINDVNDMPPVFN 88 (111)
Q Consensus 53 ~~~y~l~v~a~d~~~---~~~~~v~I~V~D~Ndn~P~F~ 88 (111)
...|+|.|+|.+..+ ...+++.|.|. ||.+.
T Consensus 753 pG~Y~f~V~a~n~~g~w~~~~~~l~i~I~-----Ppww~ 786 (795)
T 4a2l_A 753 QGTYQFLVKAANSDGKWNPIPTALEIIVL-----PIWYK 786 (795)
T ss_dssp SEEEEEEEEEECTTSCBCSSCEEEEEEEC-----CCC--
T ss_pred CCeEEEEEEEECCCCccCCCceEEEEEEE-----CCccc
Confidence 358999999998754 24677888885 77654
No 69
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=21.54 E-value=1.1e+02 Score=23.58 Aligned_cols=26 Identities=35% Similarity=0.395 Sum_probs=19.6
Q ss_pred EeEEEEEEEEecCCc---cceEEEEEEEe
Q psy585 53 VLQYELTLVASDSLN---ENKTTVVIHIN 78 (111)
Q Consensus 53 ~~~y~l~v~a~d~~~---~~~~~v~I~V~ 78 (111)
...|+|+|+|.+..+ ...+++.|.|.
T Consensus 747 pG~Y~f~V~a~~~~g~w~~~~~~l~i~I~ 775 (781)
T 3v9f_A 747 PGKYEFLVKARLHNQDWSEDTTSLRIHIN 775 (781)
T ss_dssp SEEEEEEEEEEETTSCCCSCCEEEEEEEC
T ss_pred CceEEEEEEEECCCCccCCCceEEEEEEc
Confidence 358999999998764 24567888885
No 70
>3ul5_A Canecystatin-1; defense, hydrolase inhibitor; 2.30A {Saccharum officinarum} PDB: 3ul6_A*
Probab=21.05 E-value=94 Score=19.30 Aligned_cols=20 Identities=0% Similarity=0.022 Sum_probs=10.0
Q ss_pred CEEEEEEEe-CCCccEEEEEE
Q psy585 1 YELKLAASD-NLKENYTTVVI 20 (111)
Q Consensus 1 y~l~v~A~D-~~~~~~~~v~I 20 (111)
|.|++.|.| ++....+.+.|
T Consensus 99 Y~L~V~a~d~~g~~~~y~a~V 119 (139)
T 3ul5_A 99 HHFTVQVKEAGGGKKLYEAKV 119 (139)
T ss_dssp EEEEEEEECSSCCEEEEEEEE
T ss_pred EEEEEEEecCCCCeEEEEEEE
Confidence 556666666 44444444433
No 71
>2kxg_A Aspartic protease inhibitor; sqapi, protein, hydrolase inhib; NMR {Cucurbita maxima}
Probab=20.43 E-value=1.3e+02 Score=17.15 Aligned_cols=28 Identities=29% Similarity=0.254 Sum_probs=18.5
Q ss_pred CCCceEeEEEEEEEEecC--CccceEEEEE
Q psy585 48 TLPKRVLQYELTLVASDS--LNENKTTVVI 75 (111)
Q Consensus 48 ~~~e~~~~y~l~v~a~d~--~~~~~~~v~I 75 (111)
|.|.....|.|++.|.++ +......+.|
T Consensus 48 G~~~~~~~Y~L~l~~~~~~~~~~~~y~a~V 77 (95)
T 2kxg_A 48 GIPHWDNYYNLILSAKHSPHEFSKFYNVVV 77 (95)
T ss_dssp SSCSSCCEEEEEEEEESCTTSCCEEEEEEE
T ss_pred CccccCccEEEEEEEecCCCCCceEEEEEE
Confidence 455566689999999998 3334444444
Done!