BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5854
(392 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383865049|ref|XP_003707988.1| PREDICTED: glycine receptor subunit alpha-4-like [Megachile
rotundata]
Length = 753
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/291 (54%), Positives = 201/291 (69%), Gaps = 29/291 (9%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHTT DL+F W+ PL V+ +IELPQL +
Sbjct: 238 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFIWNMTDPLVVNPEIELPQLDIS 297
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTC++++F L+RRLGY+LFHTYIP+ LIV+ + SF +P +
Sbjct: 298 NNYTTDCTIEYSTGNFTCIQIVFNLRRRLGYHLFHTYIPSALIVVFT--SFPRQPRFSSL 355
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD 185
++ + L ++ + +A SL+ DILP +PK YD
Sbjct: 356 LLSSRESDL----EEYGRKEA-----------------------SLSLKDILPLNPKQYD 388
Query: 186 KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRL 245
K R PK GQPTIVYFHVTV+ LDSI+E SMTY ADIF AQ+W+D RLRLPENM+ EYR+
Sbjct: 389 KHRAPKFLGQPTIVYFHVTVLSLDSINEESMTYVADIFLAQSWRDSRLRLPENMSEEYRI 448
Query: 246 LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L+VDWL N+WRPD FFKNAK VTF M+IPNHY+WLY DKT+LYM K +
Sbjct: 449 LDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLV 499
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/161 (67%), Positives = 135/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHTT DL+F W+ PL V+ +IELPQL +
Sbjct: 495 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFIWNMTDPLVVNPEIELPQLDIS 554
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTC++++F L+RRLGY+LFHTYIP+ LIV+MSW++FWIKPEA PA
Sbjct: 555 NNYTTDCTIEYSTGNFTCIQIVFNLRRRLGYHLFHTYIPSALIVVMSWIAFWIKPEAIPA 614
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 615 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 655
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 89/127 (70%), Positives = 103/127 (81%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL+ DILP +PK YDK R PK GQPTIVYFHVTV+ LDSI+E SMTY ADIF AQ+W+
Sbjct: 116 SLSLKDILPLNPKQYDKHRAPKFLGQPTIVYFHVTVLSLDSINEESMTYVADIFLAQSWR 175
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
D RLRLPENM+ EYR+L+VDWL N+WRPD FFKNAK VTF M+IPNHY+WLY DKT+LY
Sbjct: 176 DSRLRLPENMSEEYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 235
Query: 290 MVKFVFM 296
M K +
Sbjct: 236 MSKLTLV 242
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 21/107 (19%)
Query: 293 FVFMALMEYCLVNIVLG-----------DSDLPKPPEPAKQDKIFELAAKENARLLTGQP 341
FVF++LME+ +VN +G D DL + + K N + P
Sbjct: 656 FVFLSLMEFAVVNNYMGPVATKAMKGYSDEDLREAIDEFK-------TPMRNDSERSRSP 708
Query: 342 MIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+ P Q + + R AI ID+ SR FFP F ILN YW F
Sbjct: 709 VRPAT---VQYDTCCQGRATAIYIDKVSRFFFPFSFLILNVVYWSTF 752
>gi|328715314|ref|XP_003245592.1| PREDICTED: glycine receptor subunit alpha-3-like [Acyrthosiphon
pisum]
Length = 232
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 150/161 (93%), Positives = 156/161 (96%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAMNFMIYPHDTQEC LQMESLSHTTDD+IFQWDPE+PL VDE IELPQLQLV
Sbjct: 72 KLTLTLSCAMNFMIYPHDTQECKLQMESLSHTTDDMIFQWDPEVPLVVDENIELPQLQLV 131
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
KN+TADC+QVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA
Sbjct: 132 KNQTADCTQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 191
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQA+LPPVSYLKAVD FMSACTV
Sbjct: 192 RVTLGVTSLLTLSTQHAKSQAALPPVSYLKAVDTFMSACTV 232
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 56/68 (82%), Gaps = 3/68 (4%)
Query: 245 LLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLV 304
LLEVDWLKN+WRPDSFFKNAKAVTFQTMTIPNHY+WLYKDKTILYMVK + L C +
Sbjct: 25 LLEVDWLKNIWRPDSFFKNAKAVTFQTMTIPNHYMWLYKDKTILYMVK---LTLTLSCAM 81
Query: 305 NIVLGDSD 312
N ++ D
Sbjct: 82 NFMIYPHD 89
>gi|350398691|ref|XP_003485275.1| PREDICTED: laminin subunit beta-1-like [Bombus impatiens]
Length = 2188
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 147/161 (91%), Positives = 156/161 (96%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSCAMNF+IYPHDTQEC LQMESLSHTTD++IFQWDP++PL VDE IELPQLQLV
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLV 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
KN TADC+QVYSTGNFTCLEV+FVLKRRLGYYLFHTY+PTCLIVIMSWVSFWIKPEAAPA
Sbjct: 216 KNYTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFHTYVPTCLIVIMSWVSFWIKPEAAPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMS CTV
Sbjct: 276 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTV 316
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 115/126 (91%), Positives = 120/126 (95%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL F D+LPEDPKLYDKMRPPKK+GQ TIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK
Sbjct: 34 SLEFFDLLPEDPKLYDKMRPPKKDGQATIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 93
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
D+RLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 94 DNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILY 153
Query: 290 MVKFVF 295
MVK
Sbjct: 154 MVKLTL 159
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 62/107 (57%), Gaps = 23/107 (21%)
Query: 293 FVFMALMEYCLVNIVLGDSD------------LPKPPEPAKQDKIFELAAKENARLLTGQ 340
FVFMALMEYCLVNIVLGDSD + AK DKIF++A K++
Sbjct: 317 FVFMALMEYCLVNIVLGDSDTPPKPASPPQPPSSSGTDAAKLDKIFDIATKKSTTGPP-- 374
Query: 341 PMIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIM 387
AQRAR RA+NIDR SRVFFP LFA+LN TYWI+
Sbjct: 375 ---------PGPTPAQRARMRALNIDRVSRVFFPFLFAVLNVTYWII 412
>gi|383864059|ref|XP_003707497.1| PREDICTED: glycine receptor subunit alpha-3-like isoform 1
[Megachile rotundata]
Length = 429
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 149/161 (92%), Positives = 156/161 (96%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSCAMNF+IYPHDTQEC LQMESLSHTTD++IFQWDP++PL VDE IELPQLQLV
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLV 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
KN TADC+QVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA
Sbjct: 216 KNYTADCTQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMS CTV
Sbjct: 276 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTV 316
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/139 (84%), Positives = 127/139 (91%), Gaps = 3/139 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL F D+LPEDPKLYDKMRPPKK+GQ T+VYFHVTVMGLDSIDENSMTYAADIFFAQTWK
Sbjct: 34 SLEFFDLLPEDPKLYDKMRPPKKDGQATVVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 93
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
D+RLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 94 DNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILY 153
Query: 290 MVKFVFMALMEYCLVNIVL 308
MVK + L C +N ++
Sbjct: 154 MVK---LTLKLSCAMNFLI 169
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 73/113 (64%), Gaps = 13/113 (11%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPK-------------PPEPAKQDKIFELAAKENARLLTG 339
FVFMALMEYCLVNIVLGDSD P + K DKIF++A KENA LL+G
Sbjct: 317 FVFMALMEYCLVNIVLGDSDAPAAKPAPPPQPPSSSGTDSTKLDKIFDIATKENAMLLSG 376
Query: 340 QPMIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
+ AQRAR RA+NIDR SRVFFP LFA+LN TYWIMFAE++
Sbjct: 377 RSQKSSAGPPPGPTPAQRARMRALNIDRVSRVFFPFLFAVLNVTYWIMFAEYI 429
>gi|383864061|ref|XP_003707498.1| PREDICTED: glycine receptor subunit alpha-3-like isoform 2
[Megachile rotundata]
Length = 409
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 149/161 (92%), Positives = 156/161 (96%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSCAMNF+IYPHDTQEC LQMESLSHTTD++IFQWDP++PL VDE IELPQLQLV
Sbjct: 136 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLV 195
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
KN TADC+QVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA
Sbjct: 196 KNYTADCTQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 255
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMS CTV
Sbjct: 256 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTV 296
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 118/143 (82%), Positives = 129/143 (90%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
+LTF D+LPEDPKLYDKMRPPKK+GQ T+VYFHVTVMGLDSIDENSMTYAADIFFAQTWK
Sbjct: 14 NLTFFDLLPEDPKLYDKMRPPKKDGQATVVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 73
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
D+RLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 74 DNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILY 133
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C +N ++ D
Sbjct: 134 MVK---LTLKLSCAMNFLIYPHD 153
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 73/113 (64%), Gaps = 13/113 (11%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPK-------------PPEPAKQDKIFELAAKENARLLTG 339
FVFMALMEYCLVNIVLGDSD P + K DKIF++A KENA LL+G
Sbjct: 297 FVFMALMEYCLVNIVLGDSDAPAAKPAPPPQPPSSSGTDSTKLDKIFDIATKENAMLLSG 356
Query: 340 QPMIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
+ AQRAR RA+NIDR SRVFFP LFA+LN TYWIMFAE++
Sbjct: 357 RSQKSSAGPPPGPTPAQRARMRALNIDRVSRVFFPFLFAVLNVTYWIMFAEYI 409
>gi|307180901|gb|EFN68709.1| Laminin subunit beta-1 [Camponotus floridanus]
Length = 2183
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 147/161 (91%), Positives = 156/161 (96%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSCAMNF+IYPHDTQEC LQMESLSHTTD++IFQWDP++PL VDE IELPQLQLV
Sbjct: 154 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLV 213
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
KN TADC+QVYSTGNFTCLEV+FVLKRRLGYYLFHTY+PTCLIVIMSWVSFWIKPEAAPA
Sbjct: 214 KNYTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFHTYVPTCLIVIMSWVSFWIKPEAAPA 273
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMS CTV
Sbjct: 274 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTV 314
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 116/139 (83%), Positives = 127/139 (91%), Gaps = 3/139 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL F D+LPEDPKLYDKMRPPKK+GQ T+V+FHVTVMGLDSIDENSMTYAADIFFAQTWK
Sbjct: 32 SLEFFDLLPEDPKLYDKMRPPKKDGQATVVHFHVTVMGLDSIDENSMTYAADIFFAQTWK 91
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
D+RLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 92 DNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILY 151
Query: 290 MVKFVFMALMEYCLVNIVL 308
MVK + L C +N ++
Sbjct: 152 MVK---LTLKLSCAMNFLI 167
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 68/111 (61%), Gaps = 24/111 (21%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPP-------------EPAKQDKIFELAAKENARLLTG 339
FVFMALMEYCLVNIVLGDSD + AK DKIF++AAK++
Sbjct: 315 FVFMALMEYCLVNIVLGDSDASTAKPAPPPPPPSSSTADSAKLDKIFDIAAKKS------ 368
Query: 340 QPMIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAE 390
P PP+ AQRAR RA+NIDRFSRVFFP LF +LN TYWI+ E
Sbjct: 369 -PAGPPSGPTP----AQRARIRALNIDRFSRVFFPFLFTVLNVTYWIIKCE 414
>gi|118150484|ref|NP_001071279.1| histamine-gated chloride channel 1 precursor [Apis mellifera]
gi|380014766|ref|XP_003691389.1| PREDICTED: glycine receptor subunit alpha-3-like [Apis florea]
gi|110555518|gb|ABG75739.1| histamine-gated chloride channel [Apis mellifera]
Length = 428
Score = 317 bits (811), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 148/161 (91%), Positives = 156/161 (96%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSCAMNF+IYPHDTQEC LQMESLSHTTD++IFQWDP++PL VDE IELPQLQLV
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLV 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
KN TADC+QVYSTGNFTCLEV+FVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA
Sbjct: 216 KNYTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMS CTV
Sbjct: 276 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTV 316
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/143 (82%), Positives = 128/143 (89%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL F D+LPEDPKLYDKMRPPKK+GQ T+VYFHVTVMGLDSIDENSMTYAADIFFAQTWK
Sbjct: 34 SLEFFDLLPEDPKLYDKMRPPKKDGQATVVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 93
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
D+RLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 94 DNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILY 153
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C +N ++ D
Sbjct: 154 MVK---LTLKLSCAMNFLIYPHD 173
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 74/112 (66%), Gaps = 12/112 (10%)
Query: 293 FVFMALMEYCLVNIVLGDSD------------LPKPPEPAKQDKIFELAAKENARLLTGQ 340
FVFMALMEYCLVNIVLGDSD P+ AK DKIF++A KENA LL+G+
Sbjct: 317 FVFMALMEYCLVNIVLGDSDTPPKPAPPPPPPSSSGPDSAKLDKIFDIATKENAMLLSGR 376
Query: 341 PMIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQ+AR RA+NIDR SRVFFP LFA+LN TYWIMFAE++
Sbjct: 377 SQKSTTGPPPGPTPAQKARMRALNIDRVSRVFFPFLFAVLNVTYWIMFAEYI 428
>gi|340709978|ref|XP_003393576.1| PREDICTED: glycine receptor subunit alpha-3-like [Bombus
terrestris]
Length = 428
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 147/161 (91%), Positives = 156/161 (96%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSCAMNF+IYPHDTQEC LQMESLSHTTD++IFQWDP++PL VDE IELPQLQLV
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLV 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
KN TADC+QVYSTGNFTCLEV+FVLKRRLGYYLFHTY+PTCLIVIMSWVSFWIKPEAAPA
Sbjct: 216 KNYTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFHTYVPTCLIVIMSWVSFWIKPEAAPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMS CTV
Sbjct: 276 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTV 316
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 118/139 (84%), Positives = 127/139 (91%), Gaps = 3/139 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL F D+LPEDPKLYDKMRPPKK+GQ TIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK
Sbjct: 34 SLEFFDLLPEDPKLYDKMRPPKKDGQATIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 93
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
D+RLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 94 DNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILY 153
Query: 290 MVKFVFMALMEYCLVNIVL 308
MVK + L C +N ++
Sbjct: 154 MVK---LTLKLSCAMNFLI 169
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 73/112 (65%), Gaps = 12/112 (10%)
Query: 293 FVFMALMEYCLVNIVLGDSD------------LPKPPEPAKQDKIFELAAKENARLLTGQ 340
FVFMALMEYCLVNIVLGDSD + AK DKIF++A KENA LL+G+
Sbjct: 317 FVFMALMEYCLVNIVLGDSDTPPKPASPPQPPSSSGTDAAKLDKIFDIATKENAILLSGR 376
Query: 341 PMIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQRAR RA+NIDR SRVFFP LFA+LN TYWIMFAE++
Sbjct: 377 SQKSTTGPPPGPTPAQRARMRALNIDRVSRVFFPFLFAVLNVTYWIMFAEYI 428
>gi|332018203|gb|EGI58808.1| Glycine receptor subunit alpha-3 [Acromyrmex echinatior]
Length = 416
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 147/161 (91%), Positives = 156/161 (96%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSCAMNF+IYPHDTQEC LQMESLSHTTD++IFQWDP++PL VDE IELPQLQLV
Sbjct: 154 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLV 213
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
KN TADCSQVYSTGNFTCLEV+FVLKRRLGYYLFHTY+PTCLIVIMSW+SFWIKPEAAPA
Sbjct: 214 KNYTADCSQVYSTGNFTCLEVVFVLKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAAPA 273
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMS CTV
Sbjct: 274 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTV 314
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/143 (80%), Positives = 126/143 (88%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL F D+LPEDPKLYDKMRPPKK+G T+V FHVTVMGLDSIDENSMTYAADIFFAQTWK
Sbjct: 32 SLEFFDLLPEDPKLYDKMRPPKKDGHATVVNFHVTVMGLDSIDENSMTYAADIFFAQTWK 91
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
D+RLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMT+PNHY+WLYKDKTILY
Sbjct: 92 DNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTVPNHYLWLYKDKTILY 151
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C +N ++ D
Sbjct: 152 MVK---LTLKLSCAMNFLIYPHD 171
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 70/113 (61%), Gaps = 24/113 (21%)
Query: 293 FVFMALMEYCLVNIVLGDSDL-------------PKPPEPAKQDKIFELAAKENARLLTG 339
FVFMALMEYCLVNIVLGDSD + AK DKIF++AAK++ +
Sbjct: 315 FVFMALMEYCLVNIVLGDSDTPTAKPAPPPPPPCSSTSDSAKLDKIFDIAAKKSPIV--- 371
Query: 340 QPMIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQRAR RA+NIDRFSRVFFP LFA+LN TYWIMFAE++
Sbjct: 372 --------PPPGPTPAQRARIRALNIDRFSRVFFPFLFAVLNVTYWIMFAEYI 416
>gi|157131881|ref|XP_001662354.1| histamine-gated chloride channel subunit [Aedes aegypti]
gi|108871361|gb|EAT35586.1| AAEL012248-PA [Aedes aegypti]
Length = 477
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 148/161 (91%), Positives = 155/161 (96%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL+LSCAMNF+IYPHDTQEC LQMESLSHTTDD+IFQWDPE+PL VDE IELPQL LV
Sbjct: 151 KLTLRLSCAMNFLIYPHDTQECKLQMESLSHTTDDMIFQWDPEVPLVVDEHIELPQLALV 210
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
KN TADC+QVYSTGNFTCLEV+FVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA
Sbjct: 211 KNNTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 270
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMS CTV
Sbjct: 271 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTV 311
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 121/144 (84%), Positives = 129/144 (89%), Gaps = 3/144 (2%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
TSLTFNDILPEDPKLYDKMRPPKK+GQPT V FHVTVMGLDSIDE SMTYAADIFFAQTW
Sbjct: 28 TSLTFNDILPEDPKLYDKMRPPKKDGQPTTVLFHVTVMGLDSIDETSMTYAADIFFAQTW 87
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
KDHRLRLPENMTSEYRLLEV+WLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTIL
Sbjct: 88 KDHRLRLPENMTSEYRLLEVEWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTIL 147
Query: 289 YMVKFVFMALMEYCLVNIVLGDSD 312
YMVK + L C +N ++ D
Sbjct: 148 YMVK---LTLRLSCAMNFLIYPHD 168
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 8/70 (11%)
Query: 331 KENARLLTGQPMI----PPNHQQA----QRNLAQRARTRAINIDRFSRVFFPVLFAILNC 382
KE+ LL+ P I PP + A + AQ RAINIDRFSRVFFP+LF +LN
Sbjct: 408 KESTLLLSPVPHIQTIPPPPCKPASAIPKLTPAQIRLRRAINIDRFSRVFFPLLFTLLNT 467
Query: 383 TYWIMFAEFL 392
YWIMF E++
Sbjct: 468 AYWIMFYEYI 477
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 40/80 (50%), Gaps = 16/80 (20%)
Query: 293 FVFMALMEYCLVNIVLGDSD--LPKPPEPAKQDKIFELAAKENARLLTGQPMIPPNHQQA 350
FVFMALMEYCLVNIVLGDSD PKP P K D+ F+ A P +
Sbjct: 312 FVFMALMEYCLVNIVLGDSDPPNPKPHPPPKMDRFFDFNA--------------PGGKNG 357
Query: 351 QRNLAQRARTRAINIDRFSR 370
+RN + ++ F R
Sbjct: 358 KRNSKSLENSETTTVNTFQR 377
>gi|350535921|ref|NP_001234890.1| histamine-gated chloride channel 1 precursor [Nasonia vitripennis]
gi|269856277|gb|ACZ51421.1| histamine-gated chloride channel 1 [Nasonia vitripennis]
Length = 438
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 147/161 (91%), Positives = 156/161 (96%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSCAMNF+IYPHDTQEC LQMESLSHTTD++IFQWDP++PL VDE IELPQLQLV
Sbjct: 159 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLV 218
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
KN TADC+QVYSTGNFTCLEVIFVLKRRLGYYLFHTY+PTCLIVIMSWVSFWIKPEAAPA
Sbjct: 219 KNYTADCTQVYSTGNFTCLEVIFVLKRRLGYYLFHTYVPTCLIVIMSWVSFWIKPEAAPA 278
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMS CT+
Sbjct: 279 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTI 319
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 118/146 (80%), Positives = 128/146 (87%), Gaps = 3/146 (2%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+ SL F D+LPEDPKLYDKMRPPKK+GQ TIVYFHVTVMGLDSIDE SMTYAADIFFAQ
Sbjct: 34 AQKSLEFFDLLPEDPKLYDKMRPPKKDGQATIVYFHVTVMGLDSIDETSMTYAADIFFAQ 93
Query: 227 TWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKT 286
TWKD+RLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKT
Sbjct: 94 TWKDNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKT 153
Query: 287 ILYMVKFVFMALMEYCLVNIVLGDSD 312
ILYMVK + L C +N ++ D
Sbjct: 154 ILYMVK---LTLKLSCAMNFLIYPHD 176
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 69/119 (57%), Gaps = 19/119 (15%)
Query: 293 FVFMALMEYCLVNIVL--GDSDLPKPPEPA----KQDKIFELAAKENARLLTGQPMIPPN 346
FVFMALMEYCLVNIVL G+ D P P + DKIF++A+KENA LL+G+
Sbjct: 320 FVFMALMEYCLVNIVLVLGEGDPAPKPAPPGPEARLDKIFDIASKENAMLLSGRSQRSQG 379
Query: 347 HQQAQR-------------NLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
N QR++ RA+NIDR SR FP LFA LN +YWI+F +++
Sbjct: 380 AAGPPPPPPPPPPQPQPPLNKTQRSKVRALNIDRVSRFLFPALFACLNVSYWIIFWKYI 438
>gi|170057467|ref|XP_001864495.1| histamine-gated chloride channel subunit [Culex quinquefasciatus]
gi|170057492|ref|XP_001864507.1| histamine-gated chloride channel subunit [Culex quinquefasciatus]
gi|167876893|gb|EDS40276.1| histamine-gated chloride channel subunit [Culex quinquefasciatus]
gi|167876905|gb|EDS40288.1| histamine-gated chloride channel subunit [Culex quinquefasciatus]
Length = 445
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 144/161 (89%), Positives = 154/161 (95%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL+LSCAMNF+IYPHDTQEC LQMESLSHTTDD+IFQWDPE+PL VDE IELPQL L+
Sbjct: 151 KLTLRLSCAMNFLIYPHDTQECKLQMESLSHTTDDMIFQWDPEVPLVVDENIELPQLALL 210
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N TADC+QVYSTGNFTCLEV+F LKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA
Sbjct: 211 RNYTADCTQVYSTGNFTCLEVVFELKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 270
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMS CT+
Sbjct: 271 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTI 311
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/158 (78%), Positives = 133/158 (84%), Gaps = 9/158 (5%)
Query: 161 MSACTVS------STSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
++AC S T LTFNDILPEDPKLYDKMRPPKKEGQPT V FHVTVMGLDSIDE
Sbjct: 14 LTACITSIAGENYQTGLTFNDILPEDPKLYDKMRPPKKEGQPTTVLFHVTVMGLDSIDET 73
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEV+WLKNMWRPDSFFKNAK+VTFQTMTI
Sbjct: 74 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVEWLKNMWRPDSFFKNAKSVTFQTMTI 133
Query: 275 PNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVLGDSD 312
PNHY+WLYKDKTILYMVK + L C +N ++ D
Sbjct: 134 PNHYMWLYKDKTILYMVK---LTLRLSCAMNFLIYPHD 168
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 69/134 (51%), Gaps = 34/134 (25%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQ---DKIFELA----AKENARLLTGQPMIPP 345
FVFMALMEYCLVNIVLGDS+ P PP+P D+ +LA K +R L +
Sbjct: 312 FVFMALMEYCLVNIVLGDSEPPTPPKPHPPPKLDRFIDLATTRNGKRGSRNLENNEVTVN 371
Query: 346 NHQQAQRNL---------------------------AQRARTRAINIDRFSRVFFPVLFA 378
Q+ + L AQ RAINIDRFSRVFFP+LF
Sbjct: 372 TFQRQESTLLLSPVPHIQAIPPPPAKPASAIPKLTPAQIRLKRAINIDRFSRVFFPLLFT 431
Query: 379 ILNCTYWIMFAEFL 392
+LN YWIMF E++
Sbjct: 432 LLNLAYWIMFYEYI 445
>gi|158262725|ref|NP_001103422.1| histamine-gated chloride channel precursor [Tribolium castaneum]
gi|156447619|gb|ABU63602.1| histamine-gated chloride channel [Tribolium castaneum]
Length = 402
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 145/161 (90%), Positives = 153/161 (95%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL+LSCAMNFMIYPHDTQEC LQMESLSHTTDD+IFQWDP++PL VDE IELPQL LV
Sbjct: 147 KLTLRLSCAMNFMIYPHDTQECKLQMESLSHTTDDMIFQWDPDVPLVVDENIELPQLALV 206
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N TADC+QVYSTGNFTCLEV+F LKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA
Sbjct: 207 HNHTADCTQVYSTGNFTCLEVVFELKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 266
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMS CT+
Sbjct: 267 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTI 307
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 119/145 (82%), Positives = 128/145 (88%), Gaps = 3/145 (2%)
Query: 168 STSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQT 227
+T LT +DILPEDPK YDKMRPPKK+GQPT VYFHVTVMGLDSIDE SMTYAADIFFAQT
Sbjct: 23 ATGLTIHDILPEDPKKYDKMRPPKKDGQPTKVYFHVTVMGLDSIDEGSMTYAADIFFAQT 82
Query: 228 WKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTI 287
WKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTI
Sbjct: 83 WKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTI 142
Query: 288 LYMVKFVFMALMEYCLVNIVLGDSD 312
LYMVK + L C +N ++ D
Sbjct: 143 LYMVK---LTLRLSCAMNFMIYPHD 164
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/101 (72%), Positives = 83/101 (82%), Gaps = 7/101 (6%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQ-DKIFELAAKENARLLTGQPMIPPNHQQAQ 351
FVFMALMEYCLVNIVLGDSDLPKPP+PAK+ D IF++AAKEN+ LLTG P IP
Sbjct: 308 FVFMALMEYCLVNIVLGDSDLPKPPQPAKKPDSIFDMAAKENSFLLTGAPKIP------V 361
Query: 352 RNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQRAR RAINIDRFSR+FFP+LF +LN TYWIMFAE++
Sbjct: 362 VTPAQRARNRAINIDRFSRIFFPLLFTVLNGTYWIMFAEYI 402
>gi|242021923|ref|XP_002431392.1| glycine receptor alpha-2 chain precursor, putative [Pediculus
humanus corporis]
gi|212516668|gb|EEB18654.1| glycine receptor alpha-2 chain precursor, putative [Pediculus
humanus corporis]
Length = 413
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 143/161 (88%), Positives = 153/161 (95%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAMNF+IYPHDTQEC LQMESLSHTT+DLIFQWDP++PL VDE IELPQLQL+
Sbjct: 156 KLTLTLSCAMNFLIYPHDTQECKLQMESLSHTTEDLIFQWDPDVPLVVDENIELPQLQLI 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N TADC+QVYSTGNFTCLEV+FVLKRRLGYYLFHTYIP CLIVIMSWVSFWIKPEAAPA
Sbjct: 216 RNYTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFHTYIPACLIVIMSWVSFWIKPEAAPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQA+LPPVSYLKAVD FMS CTV
Sbjct: 276 RVTLGVTSLLTLSTQHAKSQAALPPVSYLKAVDGFMSVCTV 316
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/144 (81%), Positives = 127/144 (88%), Gaps = 3/144 (2%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
TSLT DILPE+PK YDKMRPPKKEG PT+V+FHVTVM LDSIDEN+MTYAADIFFAQTW
Sbjct: 33 TSLTIQDILPENPKHYDKMRPPKKEGHPTVVFFHVTVMSLDSIDENAMTYAADIFFAQTW 92
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
KDHRLRLPENMTSEYRLLEV+WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL
Sbjct: 93 KDHRLRLPENMTSEYRLLEVEWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 152
Query: 289 YMVKFVFMALMEYCLVNIVLGDSD 312
YMVK + L C +N ++ D
Sbjct: 153 YMVK---LTLTLSCAMNFLIYPHD 173
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 72/101 (71%), Gaps = 5/101 (4%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPK-PPEPAKQDKIFELAAKENARLLTGQPMIPPNHQQAQ 351
FVFMALMEYCLVNIVLGD+D K E K +KIF+L +KEN+RL+T P Q
Sbjct: 317 FVFMALMEYCLVNIVLGDNDGSKTGSETTKLEKIFDLTSKENSRLITN----PATTQSNV 372
Query: 352 RNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
R+R RAI IDRFSRVFFP+LFA+LN TYWIMF +++
Sbjct: 373 PKQTVRSRDRAIRIDRFSRVFFPLLFAVLNATYWIMFYKYI 413
>gi|347966790|ref|XP_321152.5| AGAP001913-PA [Anopheles gambiae str. PEST]
gi|333469899|gb|EAA01021.5| AGAP001913-PA [Anopheles gambiae str. PEST]
Length = 443
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/161 (91%), Positives = 153/161 (95%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSCAMNF+IYPHDTQEC LQMESLSHTTDDL+FQWD E+PL VD IELPQL LV
Sbjct: 150 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDDLVFQWDLEVPLVVDAHIELPQLALV 209
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
KN TADC+QVYSTGNFTCLEV+FVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA
Sbjct: 210 KNYTADCTQVYSTGNFTCLEVVFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 269
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMS CTV
Sbjct: 270 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTV 310
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 125/144 (86%), Positives = 132/144 (91%), Gaps = 3/144 (2%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
TSLTFNDILPEDPKLYDKMRPPKKEGQPTIV+FHVTVMGLDSIDENSMTYAADIFFAQTW
Sbjct: 27 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVFFHVTVMGLDSIDENSMTYAADIFFAQTW 86
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTIL
Sbjct: 87 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTIL 146
Query: 289 YMVKFVFMALMEYCLVNIVLGDSD 312
YMVK + L C +N ++ D
Sbjct: 147 YMVK---LTLKLSCAMNFLIYPHD 167
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 72/133 (54%), Gaps = 33/133 (24%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAK--QDKIFELAAKENAR--------------- 335
FVFMALMEYCLVNIVLGDSD P PP+P DK F+ AK R
Sbjct: 311 FVFMALMEYCLVNIVLGDSDPPSPPKPHPPKMDKFFDFTAKNGKRNSKSHEHPHDIPITT 370
Query: 336 --------LLTGQPMI----PPNHQQA----QRNLAQRARTRAINIDRFSRVFFPVLFAI 379
LL+ P I PP + A + AQ RAINIDRFSRVFFP LF +
Sbjct: 371 FQRQESTLLLSPVPHIQTIPPPPCKPASAIPKLTPAQMRLKRAINIDRFSRVFFPFLFTL 430
Query: 380 LNCTYWIMFAEFL 392
LN TYWIMF E++
Sbjct: 431 LNVTYWIMFYEYI 443
>gi|270006404|gb|EFA02852.1| histamine-gated chloride channel subunit 1 [Tribolium castaneum]
Length = 434
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/161 (90%), Positives = 153/161 (95%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL+LSCAMNFMIYPHDTQEC LQMESLSHTTDD+IFQWDP++PL VDE IELPQL LV
Sbjct: 179 KLTLRLSCAMNFMIYPHDTQECKLQMESLSHTTDDMIFQWDPDVPLVVDENIELPQLALV 238
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N TADC+QVYSTGNFTCLEV+F LKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA
Sbjct: 239 HNHTADCTQVYSTGNFTCLEVVFELKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 298
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMS CT+
Sbjct: 299 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTI 339
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/145 (82%), Positives = 128/145 (88%), Gaps = 3/145 (2%)
Query: 168 STSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQT 227
+T LT +DILPEDPK YDKMRPPKK+GQPT VYFHVTVMGLDSIDE SMTYAADIFFAQT
Sbjct: 55 TTGLTIHDILPEDPKKYDKMRPPKKDGQPTKVYFHVTVMGLDSIDEGSMTYAADIFFAQT 114
Query: 228 WKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTI 287
WKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTI
Sbjct: 115 WKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTI 174
Query: 288 LYMVKFVFMALMEYCLVNIVLGDSD 312
LYMVK + L C +N ++ D
Sbjct: 175 LYMVK---LTLRLSCAMNFMIYPHD 196
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/101 (72%), Positives = 83/101 (82%), Gaps = 7/101 (6%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQ-DKIFELAAKENARLLTGQPMIPPNHQQAQ 351
FVFMALMEYCLVNIVLGDSDLPKPP+PAK+ D IF++AAKEN+ LLTG P IP
Sbjct: 340 FVFMALMEYCLVNIVLGDSDLPKPPQPAKKPDSIFDMAAKENSFLLTGAPKIP------V 393
Query: 352 RNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQRAR RAINIDRFSR+FFP+LF +LN TYWIMFAE++
Sbjct: 394 VTPAQRARNRAINIDRFSRIFFPLLFTVLNGTYWIMFAEYI 434
>gi|307210676|gb|EFN87099.1| Glycine receptor subunit alpha-3 [Harpegnathos saltator]
Length = 440
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/183 (80%), Positives = 156/183 (85%), Gaps = 22/183 (12%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSCAMNF+IYPHDTQEC LQMESLSHTTD++IFQWDP++PL VDE IELPQLQLV
Sbjct: 157 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENIELPQLQLV 216
Query: 66 KNKTADCSQVYST------------------GNFTCLEVIFVLKRRLGYYLFHTYIPTCL 107
KN TADC+QVYST GNFTCLEV+FVLKRRLGYYLFHTY+PTCL
Sbjct: 217 KNYTADCTQVYSTGTVLQAQGLTDDYVTLLPGNFTCLEVVFVLKRRLGYYLFHTYVPTCL 276
Query: 108 IVIMS----WVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSA 163
IVIMS WVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMS
Sbjct: 277 IVIMSVSKTWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSV 336
Query: 164 CTV 166
CTV
Sbjct: 337 CTV 339
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/139 (83%), Positives = 126/139 (90%), Gaps = 3/139 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL F D+LPEDPK YDKMRPPKK+GQ T+VYFHVTVMGLDSIDENSMTYAADIFFAQTWK
Sbjct: 35 SLEFFDLLPEDPKFYDKMRPPKKDGQATVVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 94
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
D+RLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 95 DNRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILY 154
Query: 290 MVKFVFMALMEYCLVNIVL 308
MVK + L C +N ++
Sbjct: 155 MVK---LTLKLSCAMNFLI 170
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 67/112 (59%), Gaps = 23/112 (20%)
Query: 293 FVFMALMEYCLVNIVLGDSDL------------PKPPEPAKQDKIFELAAKENARLLTGQ 340
FVFMALMEYCLVNIVLGDSD + AK DKIF++A K++
Sbjct: 340 FVFMALMEYCLVNIVLGDSDAPAKPAPPPPPPTSSTADSAKLDKIFDIATKKSPAA---- 395
Query: 341 PMIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQ+AR RA+N+DR SRVFFP LFA+LN TYWIMFAE++
Sbjct: 396 -------PPPGPTPAQKARMRALNVDRVSRVFFPFLFAVLNVTYWIMFAEYI 440
>gi|125778572|ref|XP_001360044.1| ort [Drosophila pseudoobscura pseudoobscura]
gi|54639794|gb|EAL29196.1| ort [Drosophila pseudoobscura pseudoobscura]
Length = 488
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 139/161 (86%), Positives = 150/161 (93%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSC MNF IYPHDTQEC LQMESLSHTTDDLIFQWDP PL VDE IELPQ+ L+
Sbjct: 148 KLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALI 207
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N+TADC+QVYSTGNFTCLEV+F LKRRL YY+F+TYIPTC+IVIMSWVSFWIKPEAAPA
Sbjct: 208 RNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPA 267
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQ+SLPPVSYLKAVDAFMS CTV
Sbjct: 268 RVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTV 308
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 124/143 (86%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL DILPED K YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY AD+FFAQTWK
Sbjct: 26 SLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
DHRLRLPENMT EYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 86 DHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C++N + D
Sbjct: 146 MVK---LTLKLSCIMNFAIYPHD 165
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 25/38 (65%)
Query: 355 AQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQ RAI IDR SRV FP LFA LN YW +F E+L
Sbjct: 451 AQERLKRAIYIDRTSRVLFPALFASLNGIYWCVFYEYL 488
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVFMALMEYCL+NIVL D+ +PKP + E AAK++
Sbjct: 309 FVFMALMEYCLINIVLSDTPIPKPIAYPPKPVAGEGAAKKD 349
>gi|56418389|gb|AAV91002.1| histamine-gated chloride channel subunit [Drosophila melanogaster]
Length = 485
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 139/161 (86%), Positives = 150/161 (93%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSC MNF IYPHDTQEC LQMESLSHTTDDLIFQWDP PL VDE IELPQ+ L+
Sbjct: 148 KLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALI 207
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N+TADC+QVYSTGNFTCLEV+F LKRRL YY+F+TYIPTC+IVIMSWVSFWIKPEAAPA
Sbjct: 208 RNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPA 267
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQ+SLPPVSYLKAVDAFMS CTV
Sbjct: 268 RVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTV 308
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/143 (81%), Positives = 124/143 (86%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL DILPED K YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY AD+FFAQTWK
Sbjct: 26 SLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
+HRLRLPENMT EYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 86 NHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C++N + D
Sbjct: 146 MVK---LTLKLSCIMNFAIYPHD 165
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 25/38 (65%)
Query: 355 AQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQ RAI IDR SRV FP LFA LN YW +F E+L
Sbjct: 448 AQERLKRAIYIDRSSRVLFPALFASLNGIYWCVFYEYL 485
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPK----PPEPAKQD 323
FVFMALMEYCL+NIVL D+ +PK PP+P D
Sbjct: 309 FVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGD 343
>gi|39981112|gb|AAR33080.1| histamine-gated chloride channel [Drosophila simulans]
Length = 485
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 139/161 (86%), Positives = 150/161 (93%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSC MNF IYPHDTQEC LQMESLSHTTDDLIFQWDP PL VDE IELPQ+ L+
Sbjct: 148 KLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALI 207
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N+TADC+QVYSTGNFTCLEV+F LKRRL YY+F+TYIPTC+IVIMSWVSFWIKPEAAPA
Sbjct: 208 RNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPA 267
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQ+SLPPVSYLKAVDAFMS CTV
Sbjct: 268 RVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTV 308
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 124/143 (86%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL DILPED K YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY AD+FFAQTWK
Sbjct: 26 SLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
DHRLRLPENMT EYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 86 DHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C++N + D
Sbjct: 146 MVK---LTLKLSCIMNFAIYPHD 165
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 25/38 (65%)
Query: 355 AQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQ RAI IDR SRV FP LFA LN YW +F E+L
Sbjct: 448 AQERLKRAIYIDRSSRVLFPALFASLNGIYWCVFYEYL 485
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPK----PPEPAKQD 323
FVFMALMEYCL+NIVL D+ +PK PP+P D
Sbjct: 309 FVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGD 343
>gi|195054537|ref|XP_001994181.1| GH14967 [Drosophila grimshawi]
gi|193896051|gb|EDV94917.1| GH14967 [Drosophila grimshawi]
Length = 482
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 139/161 (86%), Positives = 150/161 (93%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSC MNF IYPHDTQEC LQMESLSHTTDDLIFQWDP PL VDE IELPQ+ L+
Sbjct: 148 KLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALI 207
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N+TADC+QVYSTGNFTCLEV+F LKRRL YY+F+TYIPTC+IVIMSWVSFWIKPEAAPA
Sbjct: 208 RNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPA 267
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQ+SLPPVSYLKAVDAFMS CTV
Sbjct: 268 RVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTV 308
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 124/143 (86%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL DILPED K YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY AD+FFAQTWK
Sbjct: 26 SLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
DHRLRLPENMT EYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 86 DHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C++N + D
Sbjct: 146 MVK---LTLKLSCIMNFAIYPHD 165
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 26/38 (68%)
Query: 355 AQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQ RAI IDR SRV FP LFA LN YWI+F E+L
Sbjct: 445 AQERLKRAIYIDRASRVLFPALFASLNGIYWIVFYEYL 482
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 40/84 (47%), Gaps = 14/84 (16%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPK----PPEPAKQDKIFELAAKENARLLTGQPMIPPNHQ 348
FVFMALMEYCL+NIVL D+ +PK PP+P D A KE G N Q
Sbjct: 309 FVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGDG----AKKEAEAAPPGGSNAAANKQ 364
Query: 349 QAQRNLAQRARTRAINIDRFSRVF 372
LA I++ ++F
Sbjct: 365 PTMLPLADE------KIEKIEKIF 382
>gi|17738049|ref|NP_524406.1| ora transientless [Drosophila melanogaster]
gi|15705911|gb|AAL05873.1|AF411340_1 histamine-gated chloride channel subunit 1 [Drosophila
melanogaster]
gi|18252313|gb|AAL66188.1|AF382403_1 histamine-gated chloride channel subunit 2 [Drosophila
melanogaster]
gi|18539482|gb|AAL74413.1|AF435469_1 histamine-gated chloride channel alpha1 subunit [Drosophila
melanogaster]
gi|7300538|gb|AAF55691.1| ora transientless [Drosophila melanogaster]
gi|27651939|gb|AAL12210.1| histamine-gated chloride channel subunit A [Drosophila
melanogaster]
gi|115646181|gb|ABJ16966.1| IP02838p [Drosophila melanogaster]
Length = 485
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 139/161 (86%), Positives = 150/161 (93%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSC MNF IYPHDTQEC LQMESLSHTTDDLIFQWDP PL VDE IELPQ+ L+
Sbjct: 148 KLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALI 207
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N+TADC+QVYSTGNFTCLEV+F LKRRL YY+F+TYIPTC+IVIMSWVSFWIKPEAAPA
Sbjct: 208 RNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPA 267
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQ+SLPPVSYLKAVDAFMS CTV
Sbjct: 268 RVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTV 308
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 124/143 (86%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL DILPED K YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY AD+FFAQTWK
Sbjct: 26 SLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
DHRLRLPENMT EYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 86 DHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C++N + D
Sbjct: 146 MVK---LTLKLSCIMNFAIYPHD 165
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 25/38 (65%)
Query: 355 AQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQ RAI IDR SRV FP LFA LN YW +F E+L
Sbjct: 448 AQERLKRAIYIDRSSRVLFPALFASLNGIYWCVFYEYL 485
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPK----PPEPAKQD 323
FVFMALMEYCL+NIVL D+ +PK PP+P D
Sbjct: 309 FVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGD 343
>gi|195353598|ref|XP_002043291.1| GM26856 [Drosophila sechellia]
gi|195569626|ref|XP_002102810.1| ort [Drosophila simulans]
gi|194127405|gb|EDW49448.1| GM26856 [Drosophila sechellia]
gi|194198737|gb|EDX12313.1| ort [Drosophila simulans]
Length = 485
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 139/161 (86%), Positives = 150/161 (93%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSC MNF IYPHDTQEC LQMESLSHTTDDLIFQWDP PL VDE IELPQ+ L+
Sbjct: 148 KLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALI 207
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N+TADC+QVYSTGNFTCLEV+F LKRRL YY+F+TYIPTC+IVIMSWVSFWIKPEAAPA
Sbjct: 208 RNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPA 267
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQ+SLPPVSYLKAVDAFMS CTV
Sbjct: 268 RVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTV 308
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 124/143 (86%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL DILPED K YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY AD+FFAQTWK
Sbjct: 26 SLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
DHRLRLPENMT EYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 86 DHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C++N + D
Sbjct: 146 MVK---LTLKLSCIMNFAIYPHD 165
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 25/38 (65%)
Query: 355 AQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQ RAI IDR SRV FP LFA LN YW +F E+L
Sbjct: 448 AQERLKRAIYIDRSSRVLFPALFASLNGIYWCVFYEYL 485
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPK----PPEPAKQD 323
FVFMALMEYCL+NIVL D+ +PK PP+P D
Sbjct: 309 FVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGD 343
>gi|194899927|ref|XP_001979509.1| GG23438 [Drosophila erecta]
gi|190651212|gb|EDV48467.1| GG23438 [Drosophila erecta]
Length = 484
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 139/161 (86%), Positives = 150/161 (93%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSC MNF IYPHDTQEC LQMESLSHTTDDLIFQWDP PL VDE IELPQ+ L+
Sbjct: 148 KLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALI 207
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N+TADC+QVYSTGNFTCLEV+F LKRRL YY+F+TYIPTC+IVIMSWVSFWIKPEAAPA
Sbjct: 208 RNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPA 267
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQ+SLPPVSYLKAVDAFMS CTV
Sbjct: 268 RVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTV 308
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 124/143 (86%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL DILPED K YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY AD+FFAQTWK
Sbjct: 26 SLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
DHRLRLPENMT EYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 86 DHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C++N + D
Sbjct: 146 MVK---LTLKLSCIMNFAIYPHD 165
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 25/38 (65%)
Query: 355 AQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQ RAI IDR SRV FP LFA LN YW +F E+L
Sbjct: 447 AQERLKRAIYIDRSSRVLFPALFASLNGIYWCVFYEYL 484
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPK----PPEPAKQD 323
FVFMALMEYCL+NIVL D+ +PK PP+P D
Sbjct: 309 FVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGD 343
>gi|195498006|ref|XP_002096341.1| GE25619 [Drosophila yakuba]
gi|194182442|gb|EDW96053.1| GE25619 [Drosophila yakuba]
Length = 485
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 139/161 (86%), Positives = 150/161 (93%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSC MNF IYPHDTQEC LQMESLSHTTDDLIFQWDP PL VDE IELPQ+ L+
Sbjct: 148 KLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALI 207
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N+TADC+QVYSTGNFTCLEV+F LKRRL YY+F+TYIPTC+IVIMSWVSFWIKPEAAPA
Sbjct: 208 RNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPA 267
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQ+SLPPVSYLKAVDAFMS CTV
Sbjct: 268 RVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTV 308
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 124/143 (86%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL DILPED K YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY AD+FFAQTWK
Sbjct: 26 SLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
DHRLRLPENMT EYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 86 DHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C++N + D
Sbjct: 146 MVK---LTLKLSCIMNFAIYPHD 165
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPK----PPEPAKQDKIFELAAKENARLLTGQPMIPPNHQ 348
FVFMALMEYCL+NIVL D+ +PK PP+P D KE G N Q
Sbjct: 309 FVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGDG----PKKEGEGAPPGGSNSAANKQ 364
Query: 349 QA 350
QA
Sbjct: 365 QA 366
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 25/38 (65%)
Query: 355 AQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQ RAI IDR SRV FP LFA LN YW +F E+L
Sbjct: 448 AQERLKRAIYIDRSSRVLFPALFASLNGIYWCVFYEYL 485
>gi|194741310|ref|XP_001953132.1| GF17611 [Drosophila ananassae]
gi|190626191|gb|EDV41715.1| GF17611 [Drosophila ananassae]
Length = 485
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 139/161 (86%), Positives = 150/161 (93%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSC MNF IYPHDTQEC LQMESLSHTTDDLIFQWDP PL VDE IELPQ+ L+
Sbjct: 148 KLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALI 207
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N+TADC+QVYSTGNFTCLEV+F LKRRL YY+F+TYIPTC+IVIMSWVSFWIKPEAAPA
Sbjct: 208 RNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPA 267
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQ+SLPPVSYLKAVDAFMS CTV
Sbjct: 268 RVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTV 308
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 124/143 (86%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL DILPED K YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY AD+FFAQTWK
Sbjct: 26 SLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
DHRLRLPENMT EYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 86 DHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C++N + D
Sbjct: 146 MVK---LTLKLSCIMNFAIYPHD 165
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 69/178 (38%), Gaps = 79/178 (44%)
Query: 293 FVFMALMEYCLVNIVLGDSDL-------PKP------------PEPA------------- 320
FVFMALMEYCL+NIVL D+ + PKP P P
Sbjct: 309 FVFMALMEYCLINIVLSDTPIPKPMAYPPKPVSGDGAKKEGEGPPPGGSNAASSKPPATM 368
Query: 321 ---------KQDKIFELAAKENARLLT------------GQPMIPPNHQ----------- 348
K +KIF+ K N R++T P IP +
Sbjct: 369 LPLADEKIEKIEKIFDEMTK-NKRIVTTTRRVVRPPLDADGPWIPRHESRIILTPTIAPP 427
Query: 349 --------------QAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
+ + AQ RAI IDR SRV FP LFA LNC YWI+F E+L
Sbjct: 428 PPPPPPVVPEPELPKPKLTPAQERLKRAIYIDRSSRVLFPALFASLNCIYWIVFYEYL 485
>gi|52139812|gb|AAR33081.2| histamine-gated chloride channel [Drosophila virilis]
Length = 482
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 139/161 (86%), Positives = 150/161 (93%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSC MNF IYPHDTQEC LQMESLSHTTDDLIFQWDP PL VDE IELPQ+ L+
Sbjct: 148 KLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALI 207
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N+TADC+QVYSTGNFTCLEV+F LKRRL YY+F+TYIPTC+IVIMSWVSFWIKPEAAPA
Sbjct: 208 RNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPA 267
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQ+SLPPVSYLKAVDAFMS CTV
Sbjct: 268 RVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTV 308
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 124/143 (86%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL DILPED K YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY AD+FFAQTWK
Sbjct: 26 SLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
DHRLRLPENMT EYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 86 DHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C++N + D
Sbjct: 146 MVK---LTLKLSCIMNFAIYPHD 165
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 69/174 (39%), Gaps = 74/174 (42%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKP----PEPA---------------------------- 320
FVFMALMEYCL+NIVL D+ +PKP P+P
Sbjct: 309 FVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGEGGKKEGEAAPAGGSNAPNNKQPTML 368
Query: 321 --------KQDKIFELAAKENARLLTGQPMIP----------PNHQQ------------- 349
K +KIF+ K + T + ++P P H+
Sbjct: 369 PLADEKIEKIEKIFDEMTKNKRIVTTTRRVVPAPLDADGPWIPRHESHIMLTPTIRPPPP 428
Query: 350 -----------AQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
+ AQ RAI IDR SRV FP LFA LNC YWI+F E+L
Sbjct: 429 PPPAPEPEMPKPKLTPAQERLKRAIYIDRSSRVLFPALFASLNCIYWIVFYEYL 482
>gi|195395758|ref|XP_002056501.1| ort [Drosophila virilis]
gi|194143210|gb|EDW59613.1| ort [Drosophila virilis]
Length = 482
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 139/161 (86%), Positives = 150/161 (93%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSC MNF IYPHDTQEC LQMESLSHTTDDLIFQWDP PL VDE IELPQ+ L+
Sbjct: 148 KLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALI 207
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N+TADC+QVYSTGNFTCLEV+F LKRRL YY+F+TYIPTC+IVIMSWVSFWIKPEAAPA
Sbjct: 208 RNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPA 267
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQ+SLPPVSYLKAVDAFMS CTV
Sbjct: 268 RVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTV 308
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 124/143 (86%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL DILPED K YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY AD+FFAQTWK
Sbjct: 26 SLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
DHRLRLPENMT EYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 86 DHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C++N + D
Sbjct: 146 MVK---LTLKLSCIMNFAIYPHD 165
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 66/175 (37%), Gaps = 76/175 (43%)
Query: 293 FVFMALMEYCLVNIVL------------------------------GDSDLPKPPEPA-- 320
FVFMALMEYCL+NIVL G S+ P +P
Sbjct: 309 FVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGEGGKKEGEAAPAGGSNAPNNKQPTML 368
Query: 321 --------KQDKIFELAAKENARLLT------------GQPMIPPNHQQ----------- 349
K +KIF+ K N R++T P IP +
Sbjct: 369 PLADEKIEKIEKIFDEMTK-NKRIVTTTRRVVRPPLDADGPWIPRHESHIMLTPTIRPPP 427
Query: 350 ------------AQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
+ AQ RAI IDR SRV FP LFA LNC YWI+F E+L
Sbjct: 428 PPPPAPEPEMPKPKLTPAQERLKRAIYIDRSSRVLFPALFASLNCIYWIVFYEYL 482
>gi|195112130|ref|XP_002000629.1| GI22418 [Drosophila mojavensis]
gi|193917223|gb|EDW16090.1| GI22418 [Drosophila mojavensis]
Length = 482
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 139/161 (86%), Positives = 150/161 (93%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSC MNF IYPHDTQEC LQMESLSHTTDDLIFQWDP PL VDE IELPQ+ L+
Sbjct: 148 KLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALI 207
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N+TADC+QVYSTGNFTCLEV+F LKRRL YY+F+TYIPTC+IVIMSWVSFWIKPEAAPA
Sbjct: 208 RNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPA 267
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQ+SLPPVSYLKAVDAFMS CTV
Sbjct: 268 RVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTV 308
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 124/143 (86%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL DILPED K YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY AD+FFAQTWK
Sbjct: 26 SLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
DHRLRLPENMT EYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 86 DHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C++N + D
Sbjct: 146 MVK---LTLKLSCIMNFAIYPHD 165
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 27/38 (71%)
Query: 355 AQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQ RAI IDR SRV FP LFA LNC YWI+F E+L
Sbjct: 445 AQERLKRAIYIDRSSRVLFPALFASLNCIYWIVFYEYL 482
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKP 316
FVFMALMEYCL+NIVL D+ +PKP
Sbjct: 309 FVFMALMEYCLINIVLSDTPIPKP 332
>gi|56418385|gb|AAV91000.1| histamine-gated chloride channel subunit [Drosophila melanogaster]
Length = 485
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/161 (85%), Positives = 150/161 (93%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSC MNF IYPHDTQEC LQ+ESLSHTTDDLIFQWDP PL VDE IELPQ+ L+
Sbjct: 148 KLTLKLSCIMNFAIYPHDTQECKLQVESLSHTTDDLIFQWDPTTPLVVDENIELPQVALI 207
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N+TADC+QVYSTGNFTCLEV+F LKRRL YY+F+TYIPTC+IVIMSWVSFWIKPEAAPA
Sbjct: 208 RNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPA 267
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQ+SLPPVSYLKAVDAFMS CTV
Sbjct: 268 RVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTV 308
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 124/143 (86%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL DILPED K YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY AD+FFAQTWK
Sbjct: 26 SLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
DHRLRLPENMT EYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 86 DHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C++N + D
Sbjct: 146 MVK---LTLKLSCIMNFAIYPHD 165
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 25/38 (65%)
Query: 355 AQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQ RAI IDR SRV FP LFA LN YW +F E+L
Sbjct: 448 AQERLKRAIYIDRSSRVLFPALFASLNGIYWCVFYEYL 485
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPK----PPEPAKQD 323
FVFMALMEYCL+NIVL D+ +PK PP+P D
Sbjct: 309 FVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGD 343
>gi|56418387|gb|AAV91001.1| histamine-gated chloride channel subunit [Drosophila melanogaster]
Length = 485
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 138/161 (85%), Positives = 149/161 (92%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSC MNF IYPH TQEC LQMESLSHTTDDLIFQWDP PL VDE IELPQ+ L+
Sbjct: 148 KLTLKLSCIMNFAIYPHVTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALI 207
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N+TADC+QVYSTGNFTCLEV+F LKRRL YY+F+TYIPTC+IVIMSWVSFWIKPEAAPA
Sbjct: 208 RNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPA 267
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQ+SLPPVSYLKAVDAFMS CTV
Sbjct: 268 RVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTV 308
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 116/139 (83%), Positives = 123/139 (88%), Gaps = 3/139 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL DILPED K YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY AD+FFAQTWK
Sbjct: 26 SLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
DHRLRLPENMT EYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 86 DHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
Query: 290 MVKFVFMALMEYCLVNIVL 308
MVK + L C++N +
Sbjct: 146 MVK---LTLKLSCIMNFAI 161
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 25/38 (65%)
Query: 355 AQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQ RAI IDR SRV FP LFA LN YW +F E+L
Sbjct: 448 AQERLKRAIYIDRSSRVLFPALFASLNGIYWCVFYEYL 485
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPK----PPEPAKQD 323
FVFMALMEYCL+NIVL D+ +PK PP+P D
Sbjct: 309 FVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGD 343
>gi|195450160|ref|XP_002072391.1| GK22347 [Drosophila willistoni]
gi|194168476|gb|EDW83377.1| GK22347 [Drosophila willistoni]
Length = 489
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 138/161 (85%), Positives = 149/161 (92%), Gaps = 1/161 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSC MNF IYPHDTQEC LQMESLSHTTDDLIFQWDP PL V E IELPQ+ L+
Sbjct: 148 KLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPNTPLVV-ENIELPQVALI 206
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N+TADC+QVYSTGNFTCLEV+F LKRRL YY+F+TYIPTC+IVIMSWVSFWIKPEAAPA
Sbjct: 207 RNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPA 266
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQ+SLPPVSYLKAVDAFMS CTV
Sbjct: 267 RVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTV 307
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 124/143 (86%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL DILPED K YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY AD+FFAQTWK
Sbjct: 26 SLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
DHRLRLPENMT EYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 86 DHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C++N + D
Sbjct: 146 MVK---LTLKLSCIMNFAIYPHD 165
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 27/38 (71%)
Query: 355 AQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQ RAI IDR SRV FP LFA LNC YWI+F E+L
Sbjct: 452 AQERLKRAIYIDRSSRVLFPALFASLNCIYWIVFYEYL 489
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKP 316
FVFMALMEYCL+NIVL D+ +PKP
Sbjct: 308 FVFMALMEYCLINIVLSDTPIPKP 331
>gi|321462878|gb|EFX73898.1| hypothetical protein DAPPUDRAFT_307566 [Daphnia pulex]
Length = 398
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 129/161 (80%), Positives = 148/161 (91%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSC+MNF +YPHD+QEC +Q+ESLSHTTDDL+F+W+ ++PL V + IELPQLQL
Sbjct: 142 KLTLTLSCSMNFALYPHDSQECKIQIESLSHTTDDLVFEWEEDVPLDVWKNIELPQLQLE 201
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+QVY+TGNFTCLEV+FVLKRRLGYY+FHTYIPTCLIV+MSWVSFWIKPE APA
Sbjct: 202 GNYTNDCTQVYATGNFTCLEVVFVLKRRLGYYMFHTYIPTCLIVVMSWVSFWIKPEVAPA 261
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTLSTQHAKSQA+LPPVSYLKAVDAFMS CT+
Sbjct: 262 RVTLGVTSLLTLSTQHAKSQAALPPVSYLKAVDAFMSTCTI 302
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/150 (63%), Positives = 117/150 (78%), Gaps = 4/150 (2%)
Query: 163 ACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADI 222
C + ++ +DILP D YDKMRPP+ EGQP V+ H+TVMGLDSI+ENSMTY AD+
Sbjct: 14 GCGILVDAMELSDILP-DRFNYDKMRPPRLEGQPAKVFNHLTVMGLDSINENSMTYMADV 72
Query: 223 FFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLY 282
F+ Q+W+DHRL LPENMTSEYRLL+V+WLK++WRPDS+FKNAK VTFQTMTIPNHY+WLY
Sbjct: 73 FYVQSWRDHRLSLPENMTSEYRLLDVEWLKSIWRPDSYFKNAKQVTFQTMTIPNHYLWLY 132
Query: 283 KDKTILYMVKFVFMALMEYCLVNIVLGDSD 312
+DK ILY+VK + L C +N L D
Sbjct: 133 RDKKILYVVK---LTLTLSCSMNFALYPHD 159
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 74/101 (73%), Gaps = 6/101 (5%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPP-EPAKQDKIFELAAKENARLLTGQPMIPPNHQQAQ 351
FVFMALMEYCLVNI+LGDSD PK EP K +K+F+LAAKENAR+L GQ +
Sbjct: 303 FVFMALMEYCLVNIILGDSDTPKTANEPPKPEKVFDLAAKENARMLMGQ-----PPRPPG 357
Query: 352 RNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQRAR RAI +DRFSR FFP LF +LN +YW++FA +L
Sbjct: 358 PTPAQRARMRAIQVDRFSRFFFPFLFTVLNGSYWVVFASYL 398
>gi|321475217|gb|EFX86180.1| hypothetical protein DAPPUDRAFT_313227 [Daphnia pulex]
Length = 421
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 118/161 (73%), Positives = 140/161 (86%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSC+MNF +YPHDTQ+C++++ESLSHTTDDL+F W+ + PL VD++IELPQL LV
Sbjct: 180 KLTLILSCSMNFHLYPHDTQQCAMKIESLSHTTDDLVFNWELKTPLVVDDRIELPQLDLV 239
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ DC QVYSTGNFTCLEV+ +RRLGYYLFHTYIPTCLIV+MSW+SFWI+PEA PA
Sbjct: 240 NSAIGDCLQVYSTGNFTCLEVVLSFRRRLGYYLFHTYIPTCLIVVMSWISFWIRPEAVPA 299
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL TQHA SQ +LPPVSY+KA+D FMS CTV
Sbjct: 300 RVTLGVTSLLTLHTQHANSQKALPPVSYIKAIDVFMSGCTV 340
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/138 (67%), Positives = 114/138 (82%), Gaps = 3/138 (2%)
Query: 171 LTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKD 230
L +DILP D + YDKM PPK+EG+PT V+FHVTVM LDSIDE+SMT+AADIFF+QTW+D
Sbjct: 59 LQLSDILPADRRSYDKMEPPKREGKPTTVFFHVTVMSLDSIDESSMTFAADIFFSQTWQD 118
Query: 231 HRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYM 290
+RLR P+N+T++YRLL WL +MWRPDSFFKNAK VTFQ +TIPNHY+WLYKDK+ILYM
Sbjct: 119 YRLRFPDNLTADYRLLPTSWLNSMWRPDSFFKNAKKVTFQDITIPNHYIWLYKDKSILYM 178
Query: 291 VKFVFMALMEYCLVNIVL 308
VK + L+ C +N L
Sbjct: 179 VK---LTLILSCSMNFHL 193
>gi|321467518|gb|EFX78508.1| hypothetical protein DAPPUDRAFT_320485 [Daphnia pulex]
Length = 377
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 117/161 (72%), Positives = 138/161 (85%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSC+MNF +YPHD+Q+C +Q+ESLSHTTDDL+F+W+ ++PL V + IELPQ QL
Sbjct: 121 KLTLTLSCSMNFALYPHDSQKCKIQIESLSHTTDDLVFEWEEDVPLDVWKNIELPQWQLE 180
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N DC+QVY+TGNFTCLE +FVLKRRLG Y+ H YIPTCLIV+MSWVSFWIKPE APA
Sbjct: 181 GNYKNDCTQVYATGNFTCLEAVFVLKRRLGDYMLHIYIPTCLIVVMSWVSFWIKPEVAPA 240
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTL V SLL LSTQHAKSQA+LPPVSYLKA+D FMS CT+
Sbjct: 241 RVTLIVMSLLILSTQHAKSQAALPPVSYLKAIDVFMSTCTI 281
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/145 (62%), Positives = 110/145 (75%), Gaps = 4/145 (2%)
Query: 171 LTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKD 230
+ +DILP +YDKM PK EGQP V+ H+TVMGLDSIDE SMTY AD+F+ Q+W+D
Sbjct: 1 MELSDILPGR-FIYDKMSSPKLEGQPAKVFNHLTVMGLDSIDEKSMTYMADVFYVQSWRD 59
Query: 231 HRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYM 290
HRL LPENMTSEYRLL+V+WLK++WRPDS+FKNAK VTF TMTIPNHY+WLY+DK ILY+
Sbjct: 60 HRLSLPENMTSEYRLLDVEWLKSIWRPDSYFKNAKQVTFHTMTIPNHYLWLYRDKKILYV 119
Query: 291 VKFVFMALMEYCLVNIVLGDSDLPK 315
K + L C +N L D K
Sbjct: 120 AK---LTLTLSCSMNFALYPHDSQK 141
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 66/97 (68%), Gaps = 6/97 (6%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPE-PAKQDKIFELAAKENARLLTGQPMIPPNHQQAQ 351
FVFMALMEYCLVNI+LGDSD PK P+K + F+ A+KEN +L GQ P AQ
Sbjct: 282 FVFMALMEYCLVNIILGDSDTPKTANNPSKPETFFDPASKENVPMLMGQTSNSPGPTPAQ 341
Query: 352 RNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
R AR RAI +DRFSR FFP LF +LN +YW++F
Sbjct: 342 R-----ARMRAIQVDRFSRFFFPFLFTVLNVSYWVVF 373
>gi|357614640|gb|EHJ69188.1| histamine-gated chloride channel [Danaus plexippus]
Length = 208
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/133 (89%), Positives = 128/133 (96%)
Query: 34 LSHTTDDLIFQWDPEMPLAVDEKIELPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRR 93
+SHTTDDLIFQWDPE+PL VDE IELPQL+LV+N+TADC+QVYSTGNFTCLEVIF LKRR
Sbjct: 10 VSHTTDDLIFQWDPEVPLVVDENIELPQLELVQNRTADCTQVYSTGNFTCLEVIFKLKRR 69
Query: 94 LGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSY 153
LGY+LF+TYIPTCLIVIMSWVSFWIKP+AAPARVTLGVTSLLTLSTQHAKSQA LPPVSY
Sbjct: 70 LGYHLFNTYIPTCLIVIMSWVSFWIKPDAAPARVTLGVTSLLTLSTQHAKSQAQLPPVSY 129
Query: 154 LKAVDAFMSACTV 166
LKAVDAFMS CTV
Sbjct: 130 LKAVDAFMSVCTV 142
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 57/100 (57%), Gaps = 34/100 (34%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARLLTGQPMIPPNHQQAQR 352
FVFMALMEYCLVNI+L D KP EPA+
Sbjct: 143 FVFMALMEYCLVNIILDDRG-GKPKEPAE------------------------------- 170
Query: 353 NLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
A +AR RA++IDRFSRVFFP+LFA+LN TYWI FA+++
Sbjct: 171 --AAKARMRAVSIDRFSRVFFPLLFAVLNATYWIQFAQYI 208
>gi|195158076|ref|XP_002019920.1| GL12665 [Drosophila persimilis]
gi|194116511|gb|EDW38554.1| GL12665 [Drosophila persimilis]
Length = 445
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/143 (81%), Positives = 124/143 (86%), Gaps = 3/143 (2%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL DILPED K YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY AD+FFAQTWK
Sbjct: 26 SLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
DHRLRLPENMT EYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 86 DHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C++N + D
Sbjct: 146 MVK---LTLKLSCIMNFAIYPHD 165
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 77/98 (78%), Positives = 86/98 (87%), Gaps = 1/98 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSC MNF IYPHDTQEC LQMESLSHTTDDLIFQWDP PL VDE IELPQ+ L+
Sbjct: 148 KLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALI 207
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLF-HTY 102
+N+TADC+QVYSTGNFTCLEV+F LKRRL YY++ H Y
Sbjct: 208 RNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVYQHLY 245
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 25/38 (65%)
Query: 355 AQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
AQ RAI IDR SRV FP LFA LN YW +F E+L
Sbjct: 408 AQERLKRAIYIDRTSRVLFPALFASLNGIYWCVFYEYL 445
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVFMALMEYCL+NIVL D+ +PKP + E AAK++
Sbjct: 266 FVFMALMEYCLINIVLSDTPIPKPIAYPPKPVAGEGAAKKD 306
>gi|357620073|gb|EHJ72395.1| histamine-gated chloride channel 1 [Danaus plexippus]
Length = 227
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/149 (77%), Positives = 127/149 (85%), Gaps = 3/149 (2%)
Query: 164 CTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIF 223
C ST + F D+LP+DP+LYDKMRPPKK+ QPTIV FHVTVMGLDSIDENSMTYAADIF
Sbjct: 24 CYAQSTLVAFQDLLPDDPRLYDKMRPPKKDDQPTIVNFHVTVMGLDSIDENSMTYAADIF 83
Query: 224 FAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYK 283
FAQTWKD RLRLPENMT+EYRLLEVDWLK MWRPDSFFKNAK+VTFQTMTIPNHYVWLYK
Sbjct: 84 FAQTWKDFRLRLPENMTTEYRLLEVDWLKQMWRPDSFFKNAKSVTFQTMTIPNHYVWLYK 143
Query: 284 DKTILYMVKFVFMALMEYCLVNIVLGDSD 312
DKTILYMVK + L C +N ++ D
Sbjct: 144 DKTILYMVK---LTLKLSCAMNFLIYPHD 169
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/28 (89%), Positives = 27/28 (96%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMES 33
+LTLKLSCAMNF+IYPHDTQEC LQMES
Sbjct: 152 KLTLKLSCAMNFLIYPHDTQECKLQMES 179
>gi|321459086|gb|EFX70143.1| hypothetical protein DAPPUDRAFT_300576 [Daphnia pulex]
Length = 505
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/161 (70%), Positives = 133/161 (82%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+Q+ESLSHTT DL+F+W+ PL + IELPQL +
Sbjct: 238 KLTLVLSCAMKFENYPHDTQVCSMQIESLSHTTHDLVFKWNFTDPLVTNPDIELPQLDIA 297
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
KN T DC+ YSTGNFTCL V+F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 298 KNTTEDCTLEYSTGNFTCLAVVFNLRRRLGYHLFHTYIPSGLIVVMSWISFWIKPEAIPA 357
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
R TLGVTSLLTLSTQ +SQ SLPPVSY+KA+D +MS+CTV
Sbjct: 358 RATLGVTSLLTLSTQSTQSQRSLPPVSYVKAIDVWMSSCTV 398
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 83/128 (64%), Positives = 103/128 (80%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL DILP + K YDK R PK GQPTIVYFHVTV+ +D+I+E SMTY ADIF AQ+W
Sbjct: 115 SSLVLGDILPRNSKSYDKNRAPKFFGQPTIVYFHVTVLSIDTINEESMTYVADIFLAQSW 174
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+DHRLRLPE+MT EYR+L+V WL+++WRPD FFKNAK VTF M++PNHY+WLY DKT++
Sbjct: 175 RDHRLRLPEDMTEEYRILDVGWLQDIWRPDCFFKNAKKVTFHEMSVPNHYLWLYHDKTLI 234
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 235 YMAKLTLV 242
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 17/109 (15%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAK----QDKIFELAAKENAR----LLTGQPMIP 344
FVFM+LME+ +VN +G P +P K +D + N L G+ P
Sbjct: 399 FVFMSLMEFAVVNSFMG----PVATKPMKGYSEEDLTIHRPSGYNGTSSSLRLRGKASSP 454
Query: 345 PNHQQAQRNLAQ-----RARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
Q R A+ ID++SR+FFP+ F ILN YW F
Sbjct: 455 ARGPPPPPPGPQYVTFCNGREVALFIDQWSRLFFPLAFIILNVVYWTTF 503
>gi|322793634|gb|EFZ17084.1| hypothetical protein SINV_11116 [Solenopsis invicta]
Length = 422
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/163 (66%), Positives = 136/163 (83%)
Query: 4 EYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQ 63
+RLTL LSCAM F YPHDTQ CS+ +ESLSHTT DL+F W+ PL V+ +IELPQL
Sbjct: 162 RFRLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFLWNTTDPLVVNPEIELPQLD 221
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ N T DC+ YSTGNFTC++++F L+RRLGY+LFHTYIP+ LIV+MSW++FWIKPEA
Sbjct: 222 ISNNYTTDCTIEYSTGNFTCIQIVFNLRRRLGYHLFHTYIPSALIVVMSWIAFWIKPEAI 281
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
PARVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 282 PARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 324
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/138 (64%), Positives = 108/138 (78%), Gaps = 1/138 (0%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
TSL+ DILP +PK YDK + PK GQPTIVYFHVTV+ LDSI+E SMTY ADIF AQ+W
Sbjct: 14 TSLSLKDILPLNPKQYDKHKAPKFLGQPTIVYFHVTVLSLDSINEESMTYVADIFLAQSW 73
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+V+WL N+WRPD FFKNAK VTF M+IPNHY+WLY D+T+L
Sbjct: 74 RDSRLRLPENMSEDYRILDVEWLHNIWRPDCFFKNAKKVTFHKMSIPNHYLWLYHDETLL 133
Query: 289 YMVKFVFMALMEYC-LVN 305
YM + L C L+N
Sbjct: 134 YMSNKTYSYLKLKCNLIN 151
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 49/111 (44%), Gaps = 29/111 (26%)
Query: 293 FVFMALMEYCLVNIVLG-----------DSDLPKPPE----PAKQDKIFELAAKENARLL 337
FVF++LME+ +VN +G D DL + + P + D E +R
Sbjct: 325 FVFLSLMEFAIVNNYMGSVATKAMKGYSDEDLREAIDDFKTPMRPDA-------ERSRSP 377
Query: 338 TGQPMIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
T QP + Q N R AI ID+ SR FFP F ILN YW F
Sbjct: 378 TRQPTV-------QCNQCCHGRDTAIYIDKVSRFFFPFSFFILNVVYWSTF 421
>gi|321459085|gb|EFX70142.1| hypothetical protein DAPPUDRAFT_328373 [Daphnia pulex]
Length = 420
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/161 (69%), Positives = 134/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+Q+ESLSHTT DL+F+W+ PL + IELPQL +
Sbjct: 150 KLTLVLSCAMKFESYPHDTQICSMQIESLSHTTFDLVFKWNLTDPLVTNPDIELPQLDIA 209
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
KN T DC+ YSTGNFTCL V+F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 210 KNFTEDCTLEYSTGNFTCLAVVFNLRRRLGYHLFHTYIPSGLIVVMSWISFWIKPEAIPA 269
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ +SQ SLPPVSY+KA+D +MS+CT+
Sbjct: 270 RVTLGVTSLLTLATQSTQSQRSLPPVSYVKAIDVWMSSCTL 310
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 87/128 (67%), Positives = 106/128 (82%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
TSL DILP+D K YDK RPPK GQPT+VYFHVTV+ +D+I+E SMTY ADIF AQ+W
Sbjct: 27 TSLVLTDILPKDTKTYDKNRPPKYSGQPTVVYFHVTVLSIDTINEESMTYVADIFLAQSW 86
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+DHRLRLPENMTSEYR+L+V WL+++WRPD FFKNAK VTF M++PNHY+WLY DKT++
Sbjct: 87 RDHRLRLPENMTSEYRILDVGWLQDIWRPDVFFKNAKQVTFHEMSVPNHYLWLYHDKTLI 146
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 147 YMAKLTLV 154
>gi|269856279|gb|ACZ51422.1| histamine-gated chloride channel 2 [Nasonia vitripennis]
Length = 383
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 108/161 (67%), Positives = 135/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHTT DL+F W+ PL V+ +IELPQL +
Sbjct: 125 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFIWNVTDPLVVNPEIELPQLDIA 184
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTC++++F L+RRLGY+LFHTYIP+ LIV+MSW++FWIKPEA PA
Sbjct: 185 NNYTTDCTIEYSTGNFTCIQIVFNLRRRLGYHLFHTYIPSALIVVMSWIAFWIKPEAIPA 244
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 245 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 285
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 103/127 (81%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL+ DILP +PK YDK R PK GQPTIVYFHVTV+ +DSI+E SMTY ADIF AQ+W+
Sbjct: 3 SLSLRDILPINPKNYDKHRAPKYLGQPTIVYFHVTVLSIDSINEESMTYVADIFLAQSWR 62
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
D RLRLPENM+ EYR+L+VDWL N+WRPD FFKNAK VTF M+IPNHY+WLY DKT+LY
Sbjct: 63 DSRLRLPENMSEEYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 122
Query: 290 MVKFVFM 296
M K +
Sbjct: 123 MSKLTLV 129
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 293 FVFMALMEYCLVNIVLG-----------DSDLPKPPEPAKQDKIFELAAKENARLLTGQP 341
FVF++LME+ +VN +G D DL E + K + E +R P
Sbjct: 286 FVFLSLMEFAVVNNYMGPVATKAMKGYSDEDLR---EAIDEFKTPMRSESERSR----SP 338
Query: 342 MIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+ PP Q + R AI ID+ SR FP F ILN YW F
Sbjct: 339 VRPPT---VQYDTCCEGRATAIYIDKVSRFLFPFAFFILNVVYWSTF 382
>gi|380027122|ref|XP_003697281.1| PREDICTED: glycine receptor subunit alpha-4-like [Apis florea]
Length = 439
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 108/161 (67%), Positives = 135/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHTT DL+F W+ PL V+ +IELPQL +
Sbjct: 181 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFIWNMTDPLVVNPEIELPQLDIS 240
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTC++++F L+RRLGY+LFHTYIP+ LIV+MSW++FWIKPEA PA
Sbjct: 241 NNYTTDCTIEYSTGNFTCIQIVFNLRRRLGYHLFHTYIPSALIVVMSWIAFWIKPEAIPA 300
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 301 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 341
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/128 (68%), Positives = 105/128 (82%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP +PKLYDK R PK GQPTIVYFHVTV+ +DSI+E SMTY ADIF AQ+W
Sbjct: 58 SSLSLKDILPLNPKLYDKHRAPKFLGQPTIVYFHVTVLSIDSINEESMTYVADIFLAQSW 117
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL N+WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 118 RDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 177
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 178 YMSKLTLV 185
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 21/107 (19%)
Query: 293 FVFMALMEYCLVNIVLG-----------DSDLPKPPEPAKQDKIFELAAKENARLLTGQP 341
FVF++LME+ +VN +G D DL + + K N P
Sbjct: 342 FVFLSLMEFAVVNNYMGPVATKAMKGYSDEDLREAIDEFK-------TPMRNDSERNRSP 394
Query: 342 MIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+ P Q + + R AI ID+ SR FFP F ILN YW F
Sbjct: 395 VRPAT---VQYDTCCQGRATAIYIDKVSRFFFPFSFLILNVVYWSTF 438
>gi|345486382|ref|XP_003425464.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit alpha-4
[Nasonia vitripennis]
Length = 462
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 108/161 (67%), Positives = 135/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHTT DL+F W+ PL V+ +IELPQL +
Sbjct: 204 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFIWNVTDPLVVNPEIELPQLDIA 263
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTC++++F L+RRLGY+LFHTYIP+ LIV+MSW++FWIKPEA PA
Sbjct: 264 NNYTTDCTIEYSTGNFTCIQIVFNLRRRLGYHLFHTYIPSALIVVMSWIAFWIKPEAIPA 323
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 324 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 364
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 103/127 (81%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL+ DILP +PK YDK R PK GQPTIVYFHVTV+ +DSI+E SMTY ADIF AQ+W+
Sbjct: 82 SLSLRDILPINPKNYDKHRAPKYLGQPTIVYFHVTVLSIDSINEESMTYVADIFLAQSWR 141
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
D RLRLPENM+ EYR+L+VDWL N+WRPD FFKNAK VTF M+IPNHY+WLY DKT+LY
Sbjct: 142 DSRLRLPENMSEEYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 201
Query: 290 MVKFVFM 296
M K +
Sbjct: 202 MSKLTLV 208
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 293 FVFMALMEYCLVNIVLG-----------DSDLPKPPEPAKQDKIFELAAKENARLLTGQP 341
FVF++LME+ +VN +G D DL E + K + E +R P
Sbjct: 365 FVFLSLMEFAVVNNYMGPVATKAMKGYSDEDLR---EAIDEFKTPMRSESERSR----SP 417
Query: 342 MIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+ PP Q + R AI ID+ SR FP F ILN YW F
Sbjct: 418 VRPPT---VQYDTCCEGRATAIYIDKVSRFLFPFAFFILNVVYWSTF 461
>gi|195157052|ref|XP_002019410.1| GL12390 [Drosophila persimilis]
gi|194116001|gb|EDW38044.1| GL12390 [Drosophila persimilis]
Length = 423
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 134/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHT +DL+F W+ PL V+ +IELPQL +
Sbjct: 175 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNAEIELPQLDIS 234
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL ++F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 235 NNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 294
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 295 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 335
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 101/128 (78%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP K YDK R PK GQPT+VYFHVTV+ LDSI+E SMTY DIF AQ+W
Sbjct: 52 SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSW 111
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 112 RDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 171
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 172 YMSKLTLV 179
>gi|125777616|ref|XP_001359670.1| GA13205 [Drosophila pseudoobscura pseudoobscura]
gi|54639418|gb|EAL28820.1| GA13205 [Drosophila pseudoobscura pseudoobscura]
Length = 423
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 134/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHT +DL+F W+ PL V+ +IELPQL +
Sbjct: 175 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNAEIELPQLDIS 234
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL ++F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 235 NNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 294
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 295 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 335
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 101/128 (78%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP K YDK R PK GQPT+VYFHVTV+ LDSI+E SMTY DIF AQ+W
Sbjct: 52 SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSW 111
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 112 RDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 171
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 172 YMSKLTLV 179
>gi|194744425|ref|XP_001954695.1| GF18400 [Drosophila ananassae]
gi|190627732|gb|EDV43256.1| GF18400 [Drosophila ananassae]
Length = 426
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 134/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHT +DL+F W+ PL V+ +IELPQL +
Sbjct: 175 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNAEIELPQLDIS 234
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL ++F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 235 NNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 294
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 295 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 335
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 101/128 (78%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP K YDK R PK GQPT+VYFHVTV+ LDSI+E SMTY DIF AQ+W
Sbjct: 52 SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSW 111
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 112 RDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 171
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 172 YMSKLTLV 179
>gi|195112018|ref|XP_002000573.1| GI22447 [Drosophila mojavensis]
gi|193917167|gb|EDW16034.1| GI22447 [Drosophila mojavensis]
Length = 425
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 134/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHT +DL+F W+ PL V+ +IELPQL +
Sbjct: 177 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNAEIELPQLDIS 236
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL ++F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 237 NNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 296
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 297 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 337
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 101/128 (78%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP K YDK R PK GQPT+VYFHVTV+ LDSI+E SMTY DIF AQ+W
Sbjct: 54 SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSW 113
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 114 RDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 173
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 174 YMSKLTLV 181
>gi|195329738|ref|XP_002031567.1| GM23979 [Drosophila sechellia]
gi|194120510|gb|EDW42553.1| GM23979 [Drosophila sechellia]
Length = 426
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 134/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHT +DL+F W+ PL V+ +IELPQL +
Sbjct: 175 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQLDIS 234
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL ++F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 235 NNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 294
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 295 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 335
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 101/128 (78%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP K YDK R PK GQPT+VYFHVTV+ LDSI+E SMTY DIF AQ+W
Sbjct: 52 SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSW 111
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 112 RDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 171
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 172 YMSKLTLV 179
>gi|195054425|ref|XP_001994125.1| GH17342 [Drosophila grimshawi]
gi|193895995|gb|EDV94861.1| GH17342 [Drosophila grimshawi]
Length = 425
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 134/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHT +DL+F W+ PL V+ +IELPQL +
Sbjct: 177 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNAEIELPQLDIS 236
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL ++F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 237 NNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 296
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 297 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 337
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 101/128 (78%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP K YDK R PK GQPT+VYFHVTV+ LDSI+E SMTY DIF AQ+W
Sbjct: 54 SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSW 113
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 114 RDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 173
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 174 YMSKLTLV 181
>gi|195395876|ref|XP_002056560.1| GJ11009 [Drosophila virilis]
gi|194143269|gb|EDW59672.1| GJ11009 [Drosophila virilis]
Length = 425
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 134/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHT +DL+F W+ PL V+ +IELPQL +
Sbjct: 177 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNAEIELPQLDIS 236
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL ++F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 237 NNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 296
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 297 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 337
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 101/128 (78%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP K YDK R PK GQPT+VYFHVTV+ LDSI+E SMTY DIF AQ+W
Sbjct: 54 SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSW 113
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 114 RDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 173
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 174 YMSKLTLV 181
>gi|24646092|ref|NP_731632.1| Histamine-gated chloride channel subunit 1, isoform A [Drosophila
melanogaster]
gi|18252309|gb|AAL66186.1|AF382401_1 histamine-gated chloride channel subunit 1 [Drosophila
melanogaster]
gi|10726474|gb|AAF54699.2| Histamine-gated chloride channel subunit 1, isoform A [Drosophila
melanogaster]
Length = 426
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 134/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHT +DL+F W+ PL V+ +IELPQL +
Sbjct: 175 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQLDIS 234
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL ++F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 235 NNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 294
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 295 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 335
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 101/128 (78%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP K YDK R PK GQPT+VYFHVTV+ LDSI+E SMTY DIF AQ+W
Sbjct: 52 SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSW 111
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 112 RDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 171
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 172 YMSKLTLV 179
>gi|194901940|ref|XP_001980509.1| GG18454 [Drosophila erecta]
gi|190652212|gb|EDV49467.1| GG18454 [Drosophila erecta]
Length = 422
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 134/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHT +DL+F W+ PL V+ +IELPQL +
Sbjct: 175 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQLDIS 234
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL ++F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 235 NNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 294
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 295 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 335
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 101/128 (78%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP K YDK R PK GQPT+VYFHVTV+ LDSI+E SMTY DIF AQ+W
Sbjct: 52 SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSW 111
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 112 RDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 171
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 172 YMSKLTLV 179
>gi|307183671|gb|EFN70374.1| Glycine receptor subunit alpha-2 [Camponotus floridanus]
Length = 388
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/161 (67%), Positives = 135/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHTT DL+F W+ PL V+ +IELPQL +
Sbjct: 130 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFLWNMTDPLVVNPQIELPQLDIS 189
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTC++++F L+RRLGY+LFHTYIP+ LIV+MSW++FWIKPEA PA
Sbjct: 190 NNYTTDCTIEYSTGNFTCIQIVFNLRRRLGYHLFHTYIPSALIVVMSWIAFWIKPEAIPA 249
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 250 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 290
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/128 (67%), Positives = 104/128 (81%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP +PK YDK R PK GQPT+VYFHVTV+ LDSI+E SMTY ADIF AQ+W
Sbjct: 7 SSLSLKDILPLNPKQYDKHRAPKFPGQPTVVYFHVTVLSLDSINEESMTYVADIFLAQSW 66
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL N+WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 67 RDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 126
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 127 YMSKLTLV 134
>gi|45550740|ref|NP_650116.2| Histamine-gated chloride channel subunit 1, isoform B [Drosophila
melanogaster]
gi|18252311|gb|AAL66187.1|AF382402_1 histamine-gated chloride channel subunit 1 variant [Drosophila
melanogaster]
gi|18539484|gb|AAL74414.1|AF435470_1 histamine-gated chloride channel alpha2 subunit [Drosophila
melanogaster]
gi|27651941|gb|AAL12211.1| histamine-gated chloride channel subunit B [Drosophila
melanogaster]
gi|45446456|gb|AAN13530.2| Histamine-gated chloride channel subunit 1, isoform B [Drosophila
melanogaster]
Length = 422
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 134/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHT +DL+F W+ PL V+ +IELPQL +
Sbjct: 175 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQLDIS 234
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL ++F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 235 NNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 294
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 295 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 335
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 101/128 (78%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP K YDK R PK GQPT+VYFHVTV+ LDSI+E SMTY DIF AQ+W
Sbjct: 52 SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSW 111
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 112 RDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 171
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 172 YMSKLTLV 179
>gi|195501794|ref|XP_002097946.1| GE24203 [Drosophila yakuba]
gi|194184047|gb|EDW97658.1| GE24203 [Drosophila yakuba]
Length = 422
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 134/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHT +DL+F W+ PL V+ +IELPQL +
Sbjct: 175 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQLDIS 234
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL ++F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 235 NNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 294
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 295 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 335
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 101/128 (78%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP K YDK R PK GQPT+VYFHVTV+ LDSI+E SMTY DIF AQ+W
Sbjct: 52 SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSW 111
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 112 RDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 171
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 172 YMSKLTLV 179
>gi|110555520|gb|ABG75740.1| histamine-gated chloride channel, partial [Apis mellifera]
Length = 383
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/161 (67%), Positives = 135/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHTT DL+F W+ PL V+ +IELPQL +
Sbjct: 125 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFIWNMTDPLVVNPEIELPQLDIS 184
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTC++++F L+RRLGY+LFHTYIP+ LIV+MSW++FWIKPEA PA
Sbjct: 185 NNYTTDCTIEYSTGNFTCIQIVFNLRRRLGYHLFHTYIPSALIVVMSWIAFWIKPEAIPA 244
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 245 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 285
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/128 (68%), Positives = 105/128 (82%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP +PKLYDK R PK GQPTIVYFHVTV+ +DSI+E SMTY ADIF AQ+W
Sbjct: 2 SSLSLKDILPLNPKLYDKHRAPKFLGQPTIVYFHVTVLSIDSINEESMTYVADIFLAQSW 61
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL N+WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 62 RDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 121
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 122 YMSKLTLV 129
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 21/107 (19%)
Query: 293 FVFMALMEYCLVNIVLG-----------DSDLPKPPEPAKQDKIFELAAKENARLLTGQP 341
FVF++LME+ +VN +G D DL + + K N P
Sbjct: 286 FVFLSLMEFAVVNNYMGPVATKAMKGYSDEDLREAIDEFK-------TPMRNDSERNRSP 338
Query: 342 MIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+ P Q + + R AI ID+ SR FFP F ILN YW F
Sbjct: 339 VRPAT---VQYDTCCQGRATAIYIDKVSRFFFPFSFLILNVVYWSTF 382
>gi|340709187|ref|XP_003393193.1| PREDICTED: glycine receptor subunit alpha-4-like [Bombus
terrestris]
gi|350425231|ref|XP_003494054.1| PREDICTED: glycine receptor subunit alpha-4-like [Bombus impatiens]
Length = 462
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/161 (67%), Positives = 135/161 (83%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHTT DL+F W+ PL V+ +IELPQL +
Sbjct: 204 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFIWNMTDPLVVNPEIELPQLDIS 263
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTC++++F L+RRLGY+LFHTYIP+ LIV+MSW++FWIKPEA PA
Sbjct: 264 NNYTTDCTIEYSTGNFTCIQIVFNLRRRLGYHLFHTYIPSALIVVMSWIAFWIKPEAIPA 323
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 324 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 364
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 89/127 (70%), Positives = 103/127 (81%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL+ DILP +PK YDK R PK GQPTIVYFHVTV+ LDSI+E SMTY ADIF AQ+W+
Sbjct: 82 SLSLRDILPLNPKQYDKHRAPKFLGQPTIVYFHVTVLSLDSINEESMTYVADIFLAQSWR 141
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
D RLRLPENM+ EYR+L+VDWL N+WRPD FFKNAK VTF M+IPNHY+WLY DKT+LY
Sbjct: 142 DSRLRLPENMSEEYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLY 201
Query: 290 MVKFVFM 296
M K +
Sbjct: 202 MSKLTLV 208
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 21/107 (19%)
Query: 293 FVFMALMEYCLVNIVLG-----------DSDLPKPPEPAKQDKIFELAAKENARLLTGQP 341
FVF++LME+ +VN +G D DL + + K N + P
Sbjct: 365 FVFLSLMEFAVVNNYMGPVATKAMKGYSDEDLREAIDEFK-------TPMRNESERSRSP 417
Query: 342 MIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+ P Q + + R AI ID+ SR FFP F ILN YW F
Sbjct: 418 VRPAT---VQYDTCCQGRATAIYIDKVSRFFFPFSFLILNVVYWSTF 461
>gi|328720498|ref|XP_001946739.2| PREDICTED: glycine receptor subunit alpha-4-like [Acyrthosiphon
pisum]
Length = 401
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/161 (68%), Positives = 133/161 (82%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHTT DL+F W+ PL V+ IELPQL +
Sbjct: 143 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTTHDLVFIWNMTDPLVVNPDIELPQLDIS 202
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL V+F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 203 NNITTDCTIEYSTGNFTCLAVMFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 262
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C++
Sbjct: 263 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSI 303
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 90/139 (64%), Positives = 108/139 (77%)
Query: 158 DAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMT 217
D S V TSL+ DILP +PK YDK R PK +GQPTIVYFHVTV+ LDSI+E SMT
Sbjct: 9 DIAESDNVVFETSLSLTDILPINPKNYDKNRAPKVQGQPTIVYFHVTVLSLDSINEESMT 68
Query: 218 YAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNH 277
Y ADIF AQ+W+D RLRLPENM+ +YR+L+V+WL ++WRPD FFKNAK VTF M+IPNH
Sbjct: 69 YVADIFLAQSWRDQRLRLPENMSEDYRILDVEWLHDIWRPDCFFKNAKKVTFHEMSIPNH 128
Query: 278 YVWLYKDKTILYMVKFVFM 296
Y+WLY DKT+LYM K +
Sbjct: 129 YLWLYHDKTLLYMSKLTLV 147
>gi|195453505|ref|XP_002073815.1| GK12944 [Drosophila willistoni]
gi|194169900|gb|EDW84801.1| GK12944 [Drosophila willistoni]
Length = 424
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/161 (67%), Positives = 133/161 (82%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHT +DL+F W+ PL V+ +IELPQL +
Sbjct: 177 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNAEIELPQLDIS 236
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL ++F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 237 NNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 296
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS C++
Sbjct: 297 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSTCSL 337
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 101/128 (78%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP K YDK R PK GQPT+VYFHVTV+ LDSI+E SMTY DIF AQ+W
Sbjct: 54 SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSW 113
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 114 RDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 173
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 174 YMSKLTLV 181
>gi|158262731|ref|NP_001103421.1| histamine-gated chloride channel precursor [Tribolium castaneum]
gi|156447621|gb|ABU63603.1| histamine-gated chloride channel [Tribolium castaneum]
gi|270015115|gb|EFA11563.1| histamine-gated chloride channel subunit 2 [Tribolium castaneum]
Length = 408
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 132/161 (81%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ESLSHT DL+F W+ PL V+ IELPQL +
Sbjct: 158 KLTLVLSCAMKFESYPHDTQICSMMIESLSHTDHDLVFIWNMTDPLVVNPTIELPQLDIS 217
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL ++F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 218 NNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 277
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 278 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 318
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 86/131 (65%), Positives = 105/131 (80%)
Query: 166 VSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFA 225
+ SL+ +DILP+ PK YDK R PK +GQPT+VYFHVTV+ LDSI+E SMTY DIF A
Sbjct: 32 IEENSLSLSDILPQKPKHYDKNRAPKLQGQPTVVYFHVTVLSLDSINEESMTYVTDIFLA 91
Query: 226 QTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
Q+W+D RLR PENM+ EYR+L+V+WL N+WRPD FFKNAK+VTF MTIPNHY+WLY DK
Sbjct: 92 QSWRDPRLRFPENMSEEYRILDVEWLHNIWRPDCFFKNAKSVTFHEMTIPNHYLWLYHDK 151
Query: 286 TILYMVKFVFM 296
T+LYM K +
Sbjct: 152 TLLYMSKLTLV 162
>gi|18568416|gb|AAL76078.1| histamine-gated chloride channel subunit [Drosophila melanogaster]
Length = 426
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 106/161 (65%), Positives = 133/161 (82%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL L CA+ F YPHDTQ CS+ +ESLSHT +DL+F W+ PL V+ +IELPQL +
Sbjct: 175 KLTLVLWCALKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQLDIS 234
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL ++F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 235 NNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 294
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVT+GVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 295 RVTVGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSV 335
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 79/128 (61%), Positives = 97/128 (75%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP K YDK R PK GQPT+VY HVTV+ LDSI+E SMTY DIF AQ+W
Sbjct: 52 SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYLHVTVLSLDSINEESMTYVTDIFLAQSW 111
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D R RLPENM+ +YR+L+VDWL ++WR D FFKNAK VTF M+IPNHY+W+Y DKT+
Sbjct: 112 RDPRPRLPENMSEQYRILDVDWLHSIWRADCFFKNAKKVTFHEMSIPNHYIWVYHDKTLF 171
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 172 YMSKLTLV 179
>gi|242002114|ref|XP_002435700.1| glycine receptor alpha 1 variant, putative [Ixodes scapularis]
gi|215499036|gb|EEC08530.1| glycine receptor alpha 1 variant, putative [Ixodes scapularis]
Length = 151
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/136 (75%), Positives = 119/136 (87%)
Query: 31 MESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLVKNKTADCSQVYSTGNFTCLEVIFVL 90
+ ++S+TTDDLIF WD E+PL VD+ IELPQ LV+ +DC+ VYSTGNFTC++V F L
Sbjct: 8 IAAVSYTTDDLIFNWDDEVPLVVDDAIELPQHNLVETALSDCTTVYSTGNFTCIQVTFTL 67
Query: 91 KRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPP 150
KRRLGYY+FHTYIPTCLIVIMSW+SFWIKPEA PARVTL VTSLLTLSTQHA+SQ SLPP
Sbjct: 68 KRRLGYYMFHTYIPTCLIVIMSWISFWIKPEAVPARVTLCVTSLLTLSTQHAQSQKSLPP 127
Query: 151 VSYLKAVDAFMSACTV 166
VSY+KA+D FMS+CTV
Sbjct: 128 VSYIKAIDIFMSSCTV 143
>gi|281361603|ref|NP_001163591.1| Histamine-gated chloride channel subunit 1, isoform D [Drosophila
melanogaster]
gi|272476934|gb|ACZ94888.1| Histamine-gated chloride channel subunit 1, isoform D [Drosophila
melanogaster]
Length = 416
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/161 (64%), Positives = 128/161 (79%), Gaps = 6/161 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ES L+F W+ PL V+ +IELPQL +
Sbjct: 175 KLTLVLSCAMKFESYPHDTQICSMMIESY------LVFIWNMTDPLVVNTEIELPQLDIS 228
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL ++F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 229 NNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 288
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 289 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 329
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 101/128 (78%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP K YDK R PK GQPT+VYFHVTV+ LDSI+E SMTY DIF AQ+W
Sbjct: 52 SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSW 111
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 112 RDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 171
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 172 YMSKLTLV 179
>gi|167987252|gb|ACA13298.1| histamine-gated chloride channel hclBT1 [Drosophila melanogaster]
Length = 416
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/161 (63%), Positives = 127/161 (78%), Gaps = 6/161 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL LSCAM F YPHDTQ CS+ +ES L+F W+ PL V+ +IELPQL +
Sbjct: 175 KLTLVLSCAMKFESYPHDTQICSMMIESY------LVFIWNMTDPLVVNTEIELPQLDIS 228
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL ++F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA A
Sbjct: 229 NNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAISA 288
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 289 RVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 329
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 101/128 (78%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP K YDK R PK GQPT+VYFHVTV+ LDSI+E SMTY DIF AQ+W
Sbjct: 52 SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSW 111
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 112 RDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 171
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 172 YMSKLTLV 179
>gi|195571645|ref|XP_002103813.1| GD18784 [Drosophila simulans]
gi|194199740|gb|EDX13316.1| GD18784 [Drosophila simulans]
Length = 225
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 92/138 (66%), Positives = 116/138 (84%)
Query: 29 LQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLVKNKTADCSQVYSTGNFTCLEVIF 88
+ +ESLSHT +DL+F W+ PL V+ +IELPQL + N T DC+ YSTGNFTCL ++F
Sbjct: 1 MMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQLDISNNYTTDCTIEYSTGNFTCLAIVF 60
Query: 89 VLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASL 148
L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PARVTLGVTSLLTL+TQ+ +SQ SL
Sbjct: 61 NLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSL 120
Query: 149 PPVSYLKAVDAFMSACTV 166
PPVSY+KA+D +MS+C+V
Sbjct: 121 PPVSYVKAIDVWMSSCSV 138
>gi|170042575|ref|XP_001848996.1| histamine-gated chloride channel subunit [Culex quinquefasciatus]
gi|167866109|gb|EDS29492.1| histamine-gated chloride channel subunit [Culex quinquefasciatus]
Length = 279
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/133 (68%), Positives = 111/133 (83%)
Query: 34 LSHTTDDLIFQWDPEMPLAVDEKIELPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRR 93
LSHT DL+F W+ PL V+ +IELPQL + N T DC+ YSTGNFTCL V+F L+RR
Sbjct: 54 LSHTVQDLVFIWNMTDPLVVNPEIELPQLDISNNYTTDCTIEYSTGNFTCLAVVFNLRRR 113
Query: 94 LGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSY 153
LGY+LFHTYIP+ LIV+MSW+SFWIKPEA PARVTLGVTSLLTL+TQ+ +SQ SLPPVSY
Sbjct: 114 LGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSY 173
Query: 154 LKAVDAFMSACTV 166
+KA+D +MS+C+V
Sbjct: 174 VKAIDVWMSSCSV 186
>gi|312378142|gb|EFR24794.1| hypothetical protein AND_10384 [Anopheles darlingi]
Length = 239
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/139 (65%), Positives = 113/139 (81%)
Query: 28 SLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLVKNKTADCSQVYSTGNFTCLEVI 87
S+ +SHT DL+F W+ PL V+ +IELPQL + N T DC+ YSTGNFTCL V+
Sbjct: 9 SISGSLISHTVQDLVFIWNMTDPLVVNPEIELPQLDISNNYTTDCTIEYSTGNFTCLAVV 68
Query: 88 FVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQAS 147
F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PARVTLGVTSLLTL+TQ+ +SQ S
Sbjct: 69 FNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQS 128
Query: 148 LPPVSYLKAVDAFMSACTV 166
LPPVSY+KA+D +MS+C+V
Sbjct: 129 LPPVSYVKAIDVWMSSCSV 147
>gi|357604187|gb|EHJ64081.1| hypothetical protein KGM_13500 [Danaus plexippus]
Length = 235
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/133 (68%), Positives = 111/133 (83%)
Query: 34 LSHTTDDLIFQWDPEMPLAVDEKIELPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRR 93
LSHT DL+F W+ PL V+ IELPQL + N T+DC+ YSTGNFTCL V+F L+RR
Sbjct: 6 LSHTVHDLVFIWNLTDPLVVNPDIELPQLDIANNFTSDCTIEYSTGNFTCLAVVFNLRRR 65
Query: 94 LGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSY 153
LGY+LFHTYIP+ LIV+MSW+SFWIKPEA PARVTLGVTSLLTL+TQ+ +SQ SLPPVSY
Sbjct: 66 LGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSY 125
Query: 154 LKAVDAFMSACTV 166
+KA+D +MS+C+V
Sbjct: 126 VKAIDVWMSSCSV 138
>gi|157133734|ref|XP_001662988.1| histamine-gated chloride channel subunit [Aedes aegypti]
gi|108881493|gb|EAT45718.1| AAEL003028-PA [Aedes aegypti]
Length = 238
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/129 (66%), Positives = 104/129 (80%)
Query: 168 STSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQT 227
+ SL+ +DILP+ K YDK R PK GQPT+VYFHVTV+ +DSI+E SMTY ADIF AQ+
Sbjct: 83 AVSLSLSDILPQHHKTYDKNRAPKLLGQPTVVYFHVTVLSIDSINEESMTYVADIFLAQS 142
Query: 228 WKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTI 287
W+D RLRLPENM+ EYR+L+VDWL N+WRPD FFKNAK VTF M+IPNHY+WLY DKT+
Sbjct: 143 WRDPRLRLPENMSEEYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTL 202
Query: 288 LYMVKFVFM 296
LYM K +
Sbjct: 203 LYMSKLTLV 211
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 22/28 (78%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMES 33
+LTL LSCAM F YPHDTQ CS+ +ES
Sbjct: 207 KLTLVLSCAMKFESYPHDTQVCSMMIES 234
>gi|312381653|gb|EFR27355.1| hypothetical protein AND_05992 [Anopheles darlingi]
Length = 219
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 102/128 (79%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
SL+ +DILP K YDK R PK GQPT+VYFHVTV+ +DSI+E SMTY ADIF AQ+W
Sbjct: 40 ASLSLSDILPTHQKTYDKNRAPKLLGQPTVVYFHVTVLSIDSINEESMTYVADIFLAQSW 99
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ EYR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 100 RDPRLRLPENMSEEYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 159
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 160 YMSKLTLV 167
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 23/29 (79%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESL 34
+LTL LSCAM F YPHDTQ CS+ +ESL
Sbjct: 163 KLTLVLSCAMKFESYPHDTQICSMMIESL 191
>gi|347963409|ref|XP_003436941.1| AGAP012975-PA [Anopheles gambiae str. PEST]
gi|333467213|gb|EGK96505.1| AGAP012975-PA [Anopheles gambiae str. PEST]
Length = 210
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 102/128 (79%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
SL+ +DILP K YDK R PK GQPT+VYFHVTV+ +DSI+E SMTY ADIF AQ+W
Sbjct: 14 ASLSLSDILPTHQKTYDKNRAPKLLGQPTVVYFHVTVLSIDSINEESMTYVADIFLAQSW 73
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ EYR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 74 RDPRLRLPENMSEEYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 133
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 134 YMSKLTLV 141
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 22/28 (78%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMES 33
+LTL LSCAM F YPHDTQ CS+ +ES
Sbjct: 137 KLTLVLSCAMKFESYPHDTQICSMMIES 164
>gi|170065119|ref|XP_001867807.1| histamine-gated chloride channel subunit [Culex quinquefasciatus]
gi|167882229|gb|EDS45612.1| histamine-gated chloride channel subunit [Culex quinquefasciatus]
Length = 214
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 101/128 (78%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
SL +DILP K YDK R PK GQPT+VYFHVTV+ +DSI+E SMTY ADIF AQ+W
Sbjct: 46 ASLDLSDILPLHHKTYDKNRAPKLLGQPTVVYFHVTVLSIDSINEESMTYVADIFLAQSW 105
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ EYR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 106 RDPRLRLPENMSEEYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 165
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 166 YMSKLTLV 173
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDE 55
+LTL LSCAM F YPHDTQ CS+ +ES IF+ DP L +D+
Sbjct: 169 KLTLVLSCAMKFESYPHDTQICSMMIES-----SQPIFRRDPGECLRLDD 213
>gi|45553337|ref|NP_996196.1| Histamine-gated chloride channel subunit 1, isoform C [Drosophila
melanogaster]
gi|16648154|gb|AAL25342.1| GH14445p [Drosophila melanogaster]
gi|18539486|gb|AAL74415.1| histamine-gated chloride channel alpha21 subunit [Drosophila
melanogaster]
gi|45446457|gb|AAS65139.1| Histamine-gated chloride channel subunit 1, isoform C [Drosophila
melanogaster]
Length = 233
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 101/128 (78%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP K YDK R PK GQPT+VYFHVTV+ LDSI+E SMTY DIF AQ+W
Sbjct: 52 SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIFLAQSW 111
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RLRLPENM+ +YR+L+VDWL ++WRPD FFKNAK VTF M+IPNHY+WLY DKT+L
Sbjct: 112 RDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 171
Query: 289 YMVKFVFM 296
YM K +
Sbjct: 172 YMSKLTLV 179
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 22/28 (78%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMES 33
+LTL LSCAM F YPHDTQ CS+ +ES
Sbjct: 175 KLTLVLSCAMKFESYPHDTQICSMMIES 202
>gi|284795247|ref|NP_001165353.1| glycine receptor precursor [Ciona intestinalis]
gi|283945411|dbj|BAI66458.1| glycine receptor [Ciona intestinalis]
Length = 491
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 120/162 (74%)
Query: 3 SEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQL 62
S RL+L L+CAM+ +P D Q C +Q+ES + DL FQW ++P+ + + LPQ
Sbjct: 197 SSVRLSLTLACAMHLQNFPMDIQTCKMQLESFGYDMRDLAFQWQEDLPVQLPPSLTLPQF 256
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+++ K C++VY+TG+FTC+EV F+L+R++GYY+ TY+P+ LIVI+SWVSFWI EA
Sbjct: 257 RILGYKLGSCTKVYNTGSFTCIEVSFILERQMGYYVIQTYVPSALIVILSWVSFWINMEA 316
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
APAR LG+T++LT++TQ + ++ASLP VSY+KA+D +M+ C
Sbjct: 317 APARTALGITTVLTMTTQSSGARASLPKVSYVKAIDTWMAVC 358
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD+ P + P V ++ V SI E +M Y +IF W D R+ +
Sbjct: 93 YDQRIRPHHKRSPVNVTVNIFVNSFGSIAETTMDYRVNIFLRCRWNDQRMAFT-GFDEDA 151
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L L+N+WRPD FF N K F +T N + +YK+ + V+
Sbjct: 152 VALHPSMLENIWRPDLFFANEKHANFHEVTTENKLLRIYKNGDVYSSVRL 201
>gi|334331046|ref|XP_001371691.2| PREDICTED: glycine receptor subunit alpha-3 [Monodelphis domestica]
Length = 477
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIFQW E P+ V E + LPQ L
Sbjct: 176 RLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFQWQDEAPVQVAEGLTLPQFVLK 235
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 236 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 295
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 296 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 335
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K D+ S T S S F D L YD P +G P V ++ + SI E
Sbjct: 41 KETDSARSRSTPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAET 99
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 100 TMDYRVNIFLRQKWNDPRLAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTT 158
Query: 275 PNHYVWLYKDKTILYMVKFVFM 296
N + ++K+ +LY ++ +
Sbjct: 159 DNKLLRIFKNGNVLYSIRLTLI 180
>gi|395542375|ref|XP_003773108.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit alpha-3
[Sarcophilus harrisii]
Length = 481
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIFQW E P+ V E + LPQ L
Sbjct: 180 RLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFQWQDEAPVQVAEGLTLPQFVLK 239
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 240 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 299
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 300 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 339
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K D+ S T S S F D L YD P +G P V ++ + SI E
Sbjct: 45 KETDSARSRSTPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAET 103
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 104 TMDYRVNIFLRQKWNDPRLAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTT 162
Query: 275 PNHYVWLYKDKTILYMVKFVFM 296
N + ++K+ +LY ++ +
Sbjct: 163 DNKLLRIFKNGNVLYSIRLTLI 184
>gi|431909787|gb|ELK12933.1| Glycine receptor subunit alpha-2 [Pteropus alecto]
Length = 352
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 120/163 (73%), Gaps = 1/163 (0%)
Query: 3 SEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQL 62
+E RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ
Sbjct: 120 TEARLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF 179
Query: 63 QLVKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L + K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +
Sbjct: 180 ILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMD 239
Query: 122 AAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
AAPARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 240 AAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 282
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKN 253
G P V ++ + S+ E +M Y +IF Q W D RL E + L+ L +
Sbjct: 12 GPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSE-YPDDSLDLDPSMLDS 70
Query: 254 MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALME 300
+W+PD FF N K F +T N + + K+ +LY ++ + +E
Sbjct: 71 IWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRNMVSVFLE 117
>gi|348566767|ref|XP_003469173.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit
alpha-3-like [Cavia porcellus]
Length = 480
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 180 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 239
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 240 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 299
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 300 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 339
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 62 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 121
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 122 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 180
>gi|449270932|gb|EMC81575.1| Glycine receptor subunit alpha-2 [Columba livia]
Length = 452
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 119/160 (74%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EDKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSIR 165
>gi|224042764|ref|XP_002197622.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Taeniopygia
guttata]
Length = 452
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 119/160 (74%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EDKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSIR 165
>gi|440908969|gb|ELR58936.1| Glycine receptor subunit alpha-3, partial [Bos grunniens mutus]
Length = 462
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPAVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|224042766|ref|XP_002197634.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Taeniopygia
guttata]
Length = 452
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 119/160 (74%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EDKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSIR 165
>gi|363728848|ref|XP_003640566.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Gallus
gallus]
Length = 452
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 119/160 (74%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EDKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSIR 165
>gi|358413362|ref|XP_003582551.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Bos taurus]
gi|359067890|ref|XP_003586404.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Bos taurus]
Length = 462
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPAVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|118084056|ref|XP_001234291.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Gallus
gallus]
Length = 452
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 119/160 (74%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EDKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSIR 165
>gi|332217779|ref|XP_003258041.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Nomascus
leucogenys]
Length = 464
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|121580|sp|P24524.1|GLRA3_RAT RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor
gi|204883|gb|AAA63492.1| inhibitory glycine receptor alpha subunit [Rattus norvegicus]
Length = 464
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|403285190|ref|XP_003933918.1| PREDICTED: glycine receptor subunit alpha-3 [Saimiri boliviensis
boliviensis]
Length = 464
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|66774025|sp|Q91XP5.2|GLRA3_MOUSE RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor
gi|31322540|gb|AAP22967.1| glycine receptor alpha 3 subunit [Mus musculus]
Length = 464
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|110347441|ref|NP_006520.2| glycine receptor subunit alpha-3 isoform a precursor [Homo sapiens]
gi|109076221|ref|XP_001088083.1| PREDICTED: glycine receptor subunit alpha-3-like [Macaca mulatta]
gi|114596937|ref|XP_517543.2| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Pan
troglodytes]
gi|297674705|ref|XP_002815347.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Pongo
abelii]
gi|397505899|ref|XP_003823478.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Pan
paniscus]
gi|426346047|ref|XP_004040701.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Gorilla
gorilla gorilla]
gi|116242496|sp|O75311.2|GLRA3_HUMAN RecName: Full=Glycine receptor subunit alpha-3; Flags: Precursor
gi|23241723|gb|AAH36086.1| Glycine receptor, alpha 3 [Homo sapiens]
gi|119625135|gb|EAX04730.1| glycine receptor, alpha 3, isoform CRA_a [Homo sapiens]
gi|119625137|gb|EAX04732.1| glycine receptor, alpha 3, isoform CRA_a [Homo sapiens]
gi|123980142|gb|ABM81900.1| glycine receptor, alpha 3 [synthetic construct]
gi|123994945|gb|ABM85074.1| glycine receptor, alpha 3 [synthetic construct]
gi|355687730|gb|EHH26314.1| hypothetical protein EGK_16247 [Macaca mulatta]
gi|355749674|gb|EHH54073.1| hypothetical protein EGM_14823 [Macaca fascicularis]
Length = 464
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|426220599|ref|XP_004004502.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit alpha-3
[Ovis aries]
Length = 480
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 180 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 239
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 240 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 299
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 300 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 339
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G V ++ + SI E +M Y +IF Q W D R
Sbjct: 62 FLDKLMGRTSGYDARIRPNFKGPAVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 121
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 122 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 180
>gi|73993734|ref|XP_543200.2| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Canis lupus
familiaris]
Length = 464
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|350592347|ref|XP_003483449.1| PREDICTED: glycine receptor subunit alpha-3 [Sus scrofa]
Length = 464
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|296195142|ref|XP_002745250.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Callithrix
jacchus]
Length = 464
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|155369743|ref|NP_446176.3| glycine receptor subunit alpha-3 [Rattus norvegicus]
gi|13548663|emb|CAC35982.1| glycine receptor alpha 3 precursor [Rattus norvegicus]
Length = 480
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 180 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 239
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 240 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 299
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 300 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 339
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 62 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 121
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 122 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 180
>gi|410956542|ref|XP_003984901.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Felis catus]
Length = 464
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|149698066|ref|XP_001498366.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Equus
caballus]
Length = 464
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|301774520|ref|XP_002922679.1| PREDICTED: glycine receptor subunit alpha-3-like isoform 2
[Ailuropoda melanoleuca]
Length = 447
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|3342792|gb|AAC39919.1| glycine receptor alpha 3 subunit [Homo sapiens]
Length = 465
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|354493194|ref|XP_003508728.1| PREDICTED: glycine receptor subunit alpha-3 [Cricetulus griseus]
Length = 464
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|120300936|ref|NP_536686.2| glycine receptor subunit alpha-3 [Mus musculus]
gi|147897779|gb|AAI40462.1| Glycine receptor, alpha 3 subunit [synthetic construct]
gi|148696654|gb|EDL28601.1| glycine receptor, alpha 3 subunit [Mus musculus]
gi|151555313|gb|AAI48712.1| Glycine receptor, alpha 3 subunit [synthetic construct]
Length = 480
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 180 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 239
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 240 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 299
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 300 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 339
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 62 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 121
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 122 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 180
>gi|344288257|ref|XP_003415867.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Loxodonta
africana]
Length = 464
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGKTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|410956544|ref|XP_003984902.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Felis catus]
Length = 449
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|351694568|gb|EHA97486.1| Glycine receptor subunit alpha-3 [Heterocephalus glaber]
Length = 464
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|301774518|ref|XP_002922678.1| PREDICTED: glycine receptor subunit alpha-3-like isoform 1
[Ailuropoda melanoleuca]
Length = 462
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|350592345|ref|XP_003132880.3| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Sus scrofa]
Length = 449
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|296195144|ref|XP_002745251.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Callithrix
jacchus]
Length = 449
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|110347433|ref|NP_001036008.1| glycine receptor subunit alpha-3 isoform b precursor [Homo sapiens]
gi|149698068|ref|XP_001498338.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Equus
caballus]
gi|332820616|ref|XP_003310621.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Pan
troglodytes]
gi|395735507|ref|XP_003776595.1| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Pongo
abelii]
gi|397505897|ref|XP_003823477.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Pan
paniscus]
gi|426346045|ref|XP_004040700.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Gorilla
gorilla gorilla]
gi|3342236|gb|AAC39917.1| glycine receptor alpha 3 subunit [Homo sapiens]
gi|119625136|gb|EAX04731.1| glycine receptor, alpha 3, isoform CRA_b [Homo sapiens]
Length = 449
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|345790724|ref|XP_003433410.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Canis lupus
familiaris]
Length = 449
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E +
Sbjct: 57 YDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSE-YPDDS 115
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|441619761|ref|XP_004088614.1| PREDICTED: glycine receptor subunit alpha-3 [Nomascus leucogenys]
Length = 449
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|344288255|ref|XP_003415866.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Loxodonta
africana]
Length = 449
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGKTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|326914205|ref|XP_003203417.1| PREDICTED: glycine receptor subunit alpha-2-like [Meleagris
gallopavo]
Length = 410
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 119/160 (74%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 123 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 182
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 183 EDKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 242
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 243 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 282
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 196 PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMW 255
P V ++ + S+ E +M Y +IF Q W D RL E + L+ L ++W
Sbjct: 28 PVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSE-YPDDSLDLDPSMLDSIW 86
Query: 256 RPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+PD FF N K F +T N + + K +LY ++
Sbjct: 87 KPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSIR 123
>gi|194669246|ref|XP_614803.4| PREDICTED: glycine receptor subunit alpha-3 isoform 2 [Bos taurus]
gi|297477618|ref|XP_002689498.1| PREDICTED: glycine receptor subunit alpha-3 isoform 1 [Bos taurus]
gi|296484973|tpg|DAA27088.1| TPA: glycine receptor, alpha 3-like [Bos taurus]
Length = 447
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPAVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|344288591|ref|XP_003416031.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Loxodonta
africana]
Length = 452
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|281341890|gb|EFB17474.1| hypothetical protein PANDA_011670 [Ailuropoda melanoleuca]
Length = 442
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 144 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 203
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 204 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 263
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 264 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 303
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E +
Sbjct: 37 YDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSE-YPDDS 95
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 96 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 144
>gi|327268305|ref|XP_003218938.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Anolis
carolinensis]
Length = 455
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWMSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|395840067|ref|XP_003792888.1| PREDICTED: glycine receptor subunit alpha-3 [Otolemur garnettii]
Length = 474
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 174 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 233
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 234 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 293
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 294 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 333
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKN 253
G P V ++ + + SI E +M Y +IF Q W D RL E + L+ L +
Sbjct: 77 GPPVNVTCNIFINSVGSIAETTMDYRVNIFLRQKWNDPRLAYSE-YPDDSLDLDPSMLDS 135
Query: 254 MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 136 IWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 174
>gi|344288589|ref|XP_003416030.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Loxodonta
africana]
Length = 452
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|327268303|ref|XP_003218937.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Anolis
carolinensis]
Length = 455
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWMSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|431918319|gb|ELK17546.1| Glycine receptor subunit alpha-3 [Pteropus alecto]
Length = 415
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
Query: 293 FVF 295
Sbjct: 165 LTL 167
>gi|395526936|ref|XP_003765610.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Sarcophilus
harrisii]
Length = 452
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|149035865|gb|EDL90532.1| rCG49701, isoform CRA_a [Rattus norvegicus]
Length = 273
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 76 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 135
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 136 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 195
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 196 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 235
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 1 MDYRVNIFLRQQWNDSRLAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTD 59
Query: 276 NHYVWLYKDKTILYMVKF 293
N + + K+ +LY ++
Sbjct: 60 NKLLRISKNGKVLYSIRL 77
>gi|395526938|ref|XP_003765611.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Sarcophilus
harrisii]
Length = 452
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|348554547|ref|XP_003463087.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Cavia
porcellus]
Length = 452
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|296470483|tpg|DAA12598.1| TPA: glycine receptor, alpha 2-like isoform 2 [Bos taurus]
Length = 452
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|348554549|ref|XP_003463088.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Cavia
porcellus]
Length = 452
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|148708799|gb|EDL40746.1| glycine receptor, alpha 2 subunit, isoform CRA_b [Mus musculus]
Length = 407
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 103 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 162
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 163 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 222
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 223 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 262
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKN 253
G P V ++ + SI E +M Y +IF Q W D RL E + L+ L +
Sbjct: 6 GPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSE-YPDDSLDLDPSMLDS 64
Query: 254 MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 65 IWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRL 104
>gi|426256680|ref|XP_004021965.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Ovis aries]
gi|426256682|ref|XP_004021966.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Ovis aries]
Length = 452
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|403255308|ref|XP_003920383.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 452
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|388490372|ref|NP_001253855.1| glycine receptor subunit alpha-2 [Macaca mulatta]
gi|74006483|ref|XP_548866.2| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Canis lupus
familiaris]
gi|114687824|ref|XP_001137132.1| PREDICTED: glycine receptor subunit alpha-2 isoform 8 [Pan
troglodytes]
gi|332223907|ref|XP_003261110.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Nomascus
leucogenys]
gi|345806787|ref|XP_003435502.1| PREDICTED: glycine receptor subunit alpha-2 [Canis lupus
familiaris]
gi|397468133|ref|XP_003805749.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Pan
paniscus]
gi|402909536|ref|XP_003917473.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Papio
anubis]
gi|410988110|ref|XP_004000331.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Felis catus]
gi|410988114|ref|XP_004000333.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Felis catus]
gi|426395224|ref|XP_004063875.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Gorilla
gorilla gorilla]
gi|355757195|gb|EHH60720.1| Glycine receptor subunit alpha-2 [Macaca fascicularis]
gi|380785019|gb|AFE64385.1| glycine receptor subunit alpha-2 isoform A precursor [Macaca
mulatta]
Length = 452
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|338728953|ref|XP_003365796.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
Length = 363
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 76 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 135
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 136 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 195
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 196 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 235
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 1 MDYRVNIFLRQQWNDSRLAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTD 59
Query: 276 NHYVWLYKDKTILYMVKF 293
N + + K+ +LY ++
Sbjct: 60 NKLLRISKNGKVLYSIRL 77
>gi|300798570|ref|NP_001179843.1| glycine receptor subunit alpha-2 precursor [Bos taurus]
gi|296470482|tpg|DAA12597.1| TPA: glycine receptor, alpha 2-like isoform 1 [Bos taurus]
Length = 452
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|440899770|gb|ELR51025.1| Glycine receptor subunit alpha-2 [Bos grunniens mutus]
Length = 452
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|403255310|ref|XP_003920384.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 452
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|335305719|ref|XP_001926528.3| PREDICTED: glycine receptor subunit alpha-2 [Sus scrofa]
gi|426256686|ref|XP_004021968.1| PREDICTED: glycine receptor subunit alpha-2 isoform 5 [Ovis aries]
Length = 363
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 76 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 135
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 136 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 195
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 196 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 235
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 1 MDYRVNIFLRQQWNDSRLAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTD 59
Query: 276 NHYVWLYKDKTILYMVKF 293
N + + K+ +LY ++
Sbjct: 60 NKLLRISKNGKVLYSIRL 77
>gi|338728947|ref|XP_003365793.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
gi|338728949|ref|XP_003365794.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
Length = 452
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|426256678|ref|XP_004021964.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Ovis aries]
Length = 452
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|169646728|ref|NP_001112358.1| glycine receptor subunit alpha-2 isoform B precursor [Homo sapiens]
gi|40557002|gb|AAR87843.1| glycine receptor alpha2 subunit B [Homo sapiens]
gi|47496633|emb|CAG29339.1| GLRA2 [Homo sapiens]
gi|119619265|gb|EAW98859.1| glycine receptor, alpha 2, isoform CRA_b [Homo sapiens]
gi|158260145|dbj|BAF82250.1| unnamed protein product [Homo sapiens]
Length = 452
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|4504021|ref|NP_002054.1| glycine receptor subunit alpha-2 isoform A precursor [Homo sapiens]
gi|169646723|ref|NP_001112357.1| glycine receptor subunit alpha-2 isoform A precursor [Homo sapiens]
gi|121578|sp|P23416.1|GLRA2_HUMAN RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor
gi|31849|emb|CAA36257.1| inhibitory glycine receptor [Homo sapiens]
gi|3598701|gb|AAC35290.1| glycine receptor alpha 2 subunit [Homo sapiens]
gi|34783246|gb|AAH32864.1| Glycine receptor, alpha 2 [Homo sapiens]
gi|40557000|gb|AAR87842.1| glycine receptor alpha2 subunit A [Homo sapiens]
gi|119619266|gb|EAW98860.1| glycine receptor, alpha 2, isoform CRA_c [Homo sapiens]
gi|189069147|dbj|BAG35485.1| unnamed protein product [Homo sapiens]
gi|261861444|dbj|BAI47244.1| glycine receptor, alpha 2 [synthetic construct]
gi|312151948|gb|ADQ32486.1| glycine receptor, alpha 2 [synthetic construct]
Length = 452
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|296234942|ref|XP_002762679.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Callithrix
jacchus]
Length = 452
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|291407100|ref|XP_002719959.1| PREDICTED: glycine receptor, alpha 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 452
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|291407098|ref|XP_002719958.1| PREDICTED: glycine receptor, alpha 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 452
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|1684900|gb|AAB38272.1| glycine receptor alpha 2 subunit [Homo sapiens]
Length = 360
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|395837966|ref|XP_003791899.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Otolemur
garnettii]
Length = 453
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|221041728|dbj|BAH12541.1| unnamed protein product [Homo sapiens]
Length = 363
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 76 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 135
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 136 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 195
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 196 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 235
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 1 MDYRVNIFLRQQWNDSRLAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTD 59
Query: 276 NHYVWLYKDKTILYMVKF 293
N + + K+ +LY ++
Sbjct: 60 NKLLRISKNGKVLYSIRL 77
>gi|297709452|ref|XP_002831442.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Pongo
abelii]
Length = 452
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|392355603|ref|XP_003752086.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Rattus
norvegicus]
Length = 452
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|354482211|ref|XP_003503293.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1
[Cricetulus griseus]
Length = 452
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|296234940|ref|XP_002762678.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Callithrix
jacchus]
gi|296234944|ref|XP_002762680.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Callithrix
jacchus]
Length = 452
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|426256684|ref|XP_004021967.1| PREDICTED: glycine receptor subunit alpha-2 isoform 4 [Ovis aries]
Length = 436
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 149 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 208
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 209 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 268
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 269 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 308
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 31 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 90
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 91 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 149
Query: 293 F 293
Sbjct: 150 L 150
>gi|74006497|ref|XP_857203.1| PREDICTED: glycine receptor subunit alpha-2 isoform 9 [Canis lupus
familiaris]
gi|114687826|ref|XP_001137046.1| PREDICTED: glycine receptor subunit alpha-2 isoform 7 [Pan
troglodytes]
gi|332223909|ref|XP_003261111.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Nomascus
leucogenys]
gi|397468135|ref|XP_003805750.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Pan
paniscus]
gi|402909538|ref|XP_003917474.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Papio
anubis]
gi|410988112|ref|XP_004000332.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Felis catus]
gi|426395226|ref|XP_004063876.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Gorilla
gorilla gorilla]
Length = 452
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|395837964|ref|XP_003791898.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Otolemur
garnettii]
Length = 453
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|1710184|gb|AAB38273.1| glycine receptor alpha 2B subunit [Homo sapiens]
Length = 360
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|301779950|ref|XP_002925392.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1
[Ailuropoda melanoleuca]
Length = 452
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|34556195|ref|NP_906272.1| glycine receptor subunit alpha-2 precursor [Mus musculus]
gi|66774003|sp|Q7TNC8.1|GLRA2_MOUSE RecName: Full=Glycine receptor subunit alpha-2; Flags: Precursor
gi|33604080|gb|AAH56342.1| Glycine receptor, alpha 2 subunit [Mus musculus]
gi|46362565|gb|AAH68987.1| Glycine receptor, alpha 2 subunit [Mus musculus]
gi|74228154|dbj|BAE23962.1| unnamed protein product [Mus musculus]
Length = 452
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|6980952|ref|NP_036700.1| glycine receptor subunit alpha-2 precursor [Rattus norvegicus]
gi|392355605|ref|XP_003752087.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Rattus
norvegicus]
gi|56744|emb|CAA40549.1| neonatal type of glycine receptor [Rattus norvegicus]
gi|288345|emb|CAA43471.1| inhibitory glycine receptor alpha 2A subunit [Rattus norvegicus]
gi|13548661|emb|CAC35981.1| glycine receptor alpha 2 precursor [Rattus norvegicus]
gi|149035866|gb|EDL90533.1| rCG49701, isoform CRA_b [Rattus norvegicus]
gi|227683|prf||1709209A Gly receptor subtype
Length = 452
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|148708798|gb|EDL40745.1| glycine receptor, alpha 2 subunit, isoform CRA_a [Mus musculus]
Length = 470
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 183 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 242
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 243 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 302
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 303 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 342
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 65 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 124
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 125 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 183
>gi|354482213|ref|XP_003503294.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2
[Cricetulus griseus]
Length = 452
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|284925161|ref|NP_001165413.1| glycine receptor subunit alpha-2 isoform C [Homo sapiens]
Length = 363
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 76 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 135
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 136 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 195
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 196 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 235
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 1 MDYRVNIFLRQQWNDSRLAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTD 59
Query: 276 NHYVWLYKDKTILYMVKF 293
N + + K+ +LY ++
Sbjct: 60 NKLLRISKNGKVLYSIRL 77
>gi|194227682|ref|XP_001489514.2| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Equus
caballus]
Length = 452
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|345806791|ref|XP_003435503.1| PREDICTED: glycine receptor subunit alpha-2 [Canis lupus
familiaris]
gi|410988118|ref|XP_004000335.1| PREDICTED: glycine receptor subunit alpha-2 isoform 5 [Felis catus]
Length = 363
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 76 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 135
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 136 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 195
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 196 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 235
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 1 MDYRVNIFLRQQWNDSRLAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTD 59
Query: 276 NHYVWLYKDKTILYMVKF 293
N + + K+ +LY ++
Sbjct: 60 NKLLRISKNGKVLYSIRL 77
>gi|338728951|ref|XP_003365795.1| PREDICTED: glycine receptor subunit alpha-2 [Equus caballus]
Length = 436
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 149 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 208
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 209 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 268
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 269 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 308
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 31 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 90
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 91 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 149
Query: 293 F 293
Sbjct: 150 L 150
>gi|355704623|gb|EHH30548.1| Glycine receptor subunit alpha-2, partial [Macaca mulatta]
Length = 385
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 98 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 157
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 158 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 217
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 218 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 257
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKN 253
G P V ++ + S+ E +M Y +IF Q W D RL E + L+ L +
Sbjct: 1 GPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSE-YPDDSLDLDPSMLDS 59
Query: 254 MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 60 IWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRL 99
>gi|301779952|ref|XP_002925393.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2
[Ailuropoda melanoleuca]
Length = 452
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|402909540|ref|XP_003917475.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Papio
anubis]
Length = 436
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 149 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 208
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 209 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 268
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 269 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 308
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 31 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 90
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 91 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 149
Query: 293 F 293
Sbjct: 150 L 150
>gi|296234946|ref|XP_002762681.1| PREDICTED: glycine receptor subunit alpha-2 isoform 4 [Callithrix
jacchus]
gi|403255312|ref|XP_003920385.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 436
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 149 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 208
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 209 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 268
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 269 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 308
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y +IF Q W D RL E +
Sbjct: 42 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSE-YPDDS 100
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 101 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRL 150
>gi|114687834|ref|XP_001136822.1| PREDICTED: glycine receptor subunit alpha-2 isoform 5 [Pan
troglodytes]
gi|332223911|ref|XP_003261112.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Nomascus
leucogenys]
gi|426395228|ref|XP_004063877.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Gorilla
gorilla gorilla]
Length = 436
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 149 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 208
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 209 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 268
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 269 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 308
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 31 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 90
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 91 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 149
Query: 293 F 293
Sbjct: 150 L 150
>gi|221041716|dbj|BAH12535.1| unnamed protein product [Homo sapiens]
Length = 436
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 149 RLTLTLSCPMDLKNFPMDAQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 208
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 209 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 268
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 269 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 308
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 31 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 90
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 91 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 149
Query: 293 FVF 295
Sbjct: 150 LTL 152
>gi|281353495|gb|EFB29079.1| hypothetical protein PANDA_014885 [Ailuropoda melanoleuca]
Length = 431
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 144 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 203
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 204 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 263
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 264 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 303
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E +
Sbjct: 37 YDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSE-YPDDS 95
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 96 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRL 145
>gi|345806789|ref|XP_857159.2| PREDICTED: glycine receptor subunit alpha-2 isoform 8 [Canis lupus
familiaris]
gi|410988116|ref|XP_004000334.1| PREDICTED: glycine receptor subunit alpha-2 isoform 4 [Felis catus]
Length = 436
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 149 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 208
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 209 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 268
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 269 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 308
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 31 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 90
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 91 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 149
Query: 293 F 293
Sbjct: 150 L 150
>gi|345307468|ref|XP_001505679.2| PREDICTED: glycine receptor subunit alpha-3-like [Ornithorhynchus
anatinus]
Length = 447
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 118/162 (72%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V + + LPQ L
Sbjct: 152 RLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEEAPVQVADGLTLPQFLLK 211
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 212 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 271
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C V
Sbjct: 272 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLV 313
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKN 253
G P V ++ + SI E +M Y +IF Q W D RL E + L+ L +
Sbjct: 55 GPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSE-YPDDSLDLDPSMLDS 113
Query: 254 MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
+W+PD FF N K F +T N + ++K+ +LY ++ +
Sbjct: 114 IWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 156
>gi|395837968|ref|XP_003791900.1| PREDICTED: glycine receptor subunit alpha-2 isoform 3 [Otolemur
garnettii]
Length = 437
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 149 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 208
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 209 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 268
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 269 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 308
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 31 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 90
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 91 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 149
Query: 293 FVF 295
Sbjct: 150 LTL 152
>gi|321267538|ref|NP_001189440.1| glycine receptor, alpha 4b precursor [Danio rerio]
Length = 492
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P DTQ C++Q+ES +T +DLIFQW E P+ V + + LPQ L
Sbjct: 164 RLTLILSCPMDLKNFPMDTQTCTMQLESFGYTMNDLIFQWLDEGPVQVADDLMLPQFVLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ L VI+SWVSFWI +AAP
Sbjct: 224 EEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y ++F Q W D R
Sbjct: 46 FLDKLMGKTSGYDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++++ +LY ++
Sbjct: 106 LAYKE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIR 164
Query: 293 FVFM 296
+
Sbjct: 165 LTLI 168
>gi|1363141|pir||B49970 glycine receptor alpha-2 chain - mouse
Length = 451
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKELGYCTKHYNTGKFTCIEVKFHLDRQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L Y ++RP K G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYARIRPNFK-GPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 164
>gi|121579|sp|P22771.1|GLRA2_RAT RecName: Full=Glycine receptor subunit alpha-2; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
Length = 452
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|444524995|gb|ELV13930.1| Glycine receptor subunit alpha-2 [Tupaia chinensis]
Length = 451
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 141 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 200
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 201 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 260
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 261 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 300
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 193 EGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLK 252
G P V ++ + SI E +M Y +IF Q W D RL E + L+ L
Sbjct: 43 HGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSE-YPDDSLDLDPSMLD 101
Query: 253 NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 102 SIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 141
>gi|55250367|gb|AAH85599.1| Glra4b protein, partial [Danio rerio]
Length = 532
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P DTQ C++Q+ES +T +DLIFQW E P+ V + + LPQ L
Sbjct: 204 RLTLILSCPMDLKNFPMDTQTCTMQLESFGYTMNDLIFQWLDEGPVQVADDLMLPQFVLK 263
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ L VI+SWVSFWI +AAP
Sbjct: 264 EEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAP 323
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 324 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 363
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y ++F Q W D R
Sbjct: 86 FLDKLMGKTSGYDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPR 145
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++++ +LY ++
Sbjct: 146 LAYKE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIR 204
Query: 293 FVFM 296
+
Sbjct: 205 LTLI 208
>gi|14010349|gb|AAK51962.1|AF362764_1 glycine receptor alpha 3 subunit [Mus musculus]
Length = 463
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 163 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 222
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 223 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 282
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T+ LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 283 ARVALGITTDLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 322
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 L--RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYM 290
L P++ L+ L ++W+PD FF N K F +T N + ++K+ +LY
Sbjct: 106 LAYSYPDDSLD----LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYS 161
Query: 291 VK 292
++
Sbjct: 162 IR 163
>gi|157112074|ref|XP_001651781.1| histamine-gated chloride channel subunit [Aedes aegypti]
gi|108878174|gb|EAT42399.1| AAEL006047-PA [Aedes aegypti]
Length = 212
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/117 (70%), Positives = 101/117 (86%)
Query: 50 PLAVDEKIELPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIV 109
PL V+ +IELPQL + N T DC+ YSTGNFTCL V+F L+RRLGY+LFHTYIP+ LIV
Sbjct: 4 PLVVNPEIELPQLDISNNYTTDCTIEYSTGNFTCLAVVFNLRRRLGYHLFHTYIPSALIV 63
Query: 110 IMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
+MSW+SFWIKPEA PARVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 64 VMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 120
>gi|158301363|ref|XP_321068.3| AGAP001990-PA [Anopheles gambiae str. PEST]
gi|157012434|gb|EAA01674.3| AGAP001990-PA [Anopheles gambiae str. PEST]
Length = 212
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/117 (70%), Positives = 101/117 (86%)
Query: 50 PLAVDEKIELPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIV 109
PL V+ +IELPQL + N T DC+ YSTGNFTCL V+F L+RRLGY+LFHTYIP+ LIV
Sbjct: 4 PLVVNPEIELPQLDISNNYTTDCTIEYSTGNFTCLAVVFNLRRRLGYHLFHTYIPSALIV 63
Query: 110 IMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
+MSW+SFWIKPEA PARVTLGVTSLLTL+TQ+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 64 VMSWISFWIKPEAIPARVTLGVTSLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSV 120
>gi|345327023|ref|XP_003431119.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2
[Ornithorhynchus anatinus]
Length = 452
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V + + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVADGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDTR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|410914369|ref|XP_003970660.1| PREDICTED: glycine receptor subunit alpha-4-like [Takifugu
rubripes]
Length = 455
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W E P+ V + + LPQ L
Sbjct: 164 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLSENPVQVADDLTLPQFVLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRLNVFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + +++D ++LY ++
Sbjct: 106 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQDGSVLYSIR 164
Query: 293 FVFM 296
+
Sbjct: 165 LTLI 168
>gi|149638346|ref|XP_001516922.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1
[Ornithorhynchus anatinus]
Length = 452
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V + + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVADGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDTR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|348515583|ref|XP_003445319.1| PREDICTED: glycine receptor subunit alpha-4-like [Oreochromis
niloticus]
Length = 454
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W E P+ V + + LPQ L
Sbjct: 162 RLTLTLSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLSENPVQVADDLTLPQFVLK 221
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 222 EEKDLGYCTKHYNTGQFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 281
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 282 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 321
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y ++F Q W D R
Sbjct: 44 FLDKLMGKTSGYDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQKWNDPR 103
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + +++D ++LY ++
Sbjct: 104 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQDGSVLYSIR 162
>gi|47226189|emb|CAG08336.1| unnamed protein product [Tetraodon nigroviridis]
Length = 677
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W E P+ V + + LPQ L
Sbjct: 389 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLSENPVQVADDLTLPQFVLK 448
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 449 EEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 508
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 509 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 548
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 12/172 (6%)
Query: 135 LTLSTQHAKSQASLPPVSYLKAVDAFMSACT--VSSTSLTFNDILPED--PKL------Y 184
L S H + L VS L+A + +S+C + S + P D KL Y
Sbjct: 224 LMGSAAHG-CEGRLQSVSSLEAGTSKLSSCKEEIKPPSRAGPQMSPSDFLDKLMGRTSGY 282
Query: 185 DKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYR 244
D P +G P V ++ + S+ E +M Y ++F Q W D RL E +
Sbjct: 283 DARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRLNVFLRQKWNDPRLAYRE-YPDDSL 341
Query: 245 LLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L+ L ++W+PD FF N K F +T N + +++D ++LY ++ +
Sbjct: 342 DLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQDGSVLYSIRLTLI 393
>gi|260812497|ref|XP_002600957.1| hypothetical protein BRAFLDRAFT_79146 [Branchiostoma floridae]
gi|229286247|gb|EEN56969.1| hypothetical protein BRAFLDRAFT_79146 [Branchiostoma floridae]
Length = 428
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 114/159 (71%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL L+C M +P D Q+C++Q+ES ++T DL F+W + P+ + E +ELPQ ++
Sbjct: 154 RLTLTLACPMRLQRFPMDRQQCNMQLESFGYSTSDLNFRWKNDNPVQLSEDLELPQFKVE 213
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
C + Y+TG FTC+E F L R++GYYL TYIP+ LIVI+SWVSFWI +AAPA
Sbjct: 214 GYTLTRCDKTYNTGIFTCIEAQFNLVRQMGYYLIQTYIPSLLIVILSWVSFWINMDAAPA 273
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV LG+T++LT++TQ + S+A LP VSY+KA+D +M+ C
Sbjct: 274 RVALGITTVLTMTTQSSGSRAQLPKVSYVKAIDIWMAVC 312
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G+ V + V SI E +M Y +IF Q W D RL+ + +E
Sbjct: 48 YDARIRPNFKGEAVNVSVDIFVNSFGSIAETTMDYRVNIFLRQRWNDPRLKFMD--YNES 105
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L+ L+ +W PD FF N K F +T N + + ILY ++
Sbjct: 106 LSLDTSLLRKIWVPDLFFANEKGANFHAVTTENKLLRISPAGDILYSIRL 155
>gi|301621138|ref|XP_002939917.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 450
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W P+ V + + LPQ L
Sbjct: 163 RLTLTLSCPMDLKNFPMDVQTCAMQLESFGYTMNDLIFEWLSTSPVQVADGLTLPQFILK 222
Query: 66 K-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ N+ C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 223 EENELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 282
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 283 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 322
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF QTW D R
Sbjct: 45 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQTWNDPR 104
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 105 LSYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKNGNVLYSIR 163
>gi|301621136|ref|XP_002939916.1| PREDICTED: glycine receptor subunit alpha-2-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 450
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W P+ V + + LPQ L
Sbjct: 163 RLTLTLSCPMDLKNFPMDVQTCAMQLESFGYTMNDLIFEWLSTSPVQVADGLTLPQFILK 222
Query: 66 K-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ N+ C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 223 EENELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 282
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 283 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 322
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF QTW D R
Sbjct: 45 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQTWNDPR 104
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 105 LSYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKNGNVLYSIR 163
>gi|126336874|ref|XP_001364595.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Monodelphis
domestica]
Length = 452
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + L Q L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLSQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|291385940|ref|XP_002709523.1| PREDICTED: Glycine receptor subunit alpha-3-like isoform 1
[Oryctolagus cuniculus]
Length = 464
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ + +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLGNFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|126336876|ref|XP_001364655.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Monodelphis
domestica]
Length = 452
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + L Q L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLSQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
>gi|20750089|gb|AAM23270.1| glycine-gated ion channel alpha3 subunit [Morone americana]
Length = 440
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 130/199 (65%), Gaps = 9/199 (4%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W P+ V E + LPQ L
Sbjct: 136 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQENGPVQVAEGLTLPQFILK 195
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 196 DESDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 255
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACT--VSSTSLTF---NDILPE 179
ARV LG+T++LT++TQ + S+ SLP VSY+KA+D +M+ C V S L + N + +
Sbjct: 256 ARVALGITTVLTMTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQ 315
Query: 180 DPKLYDKMRPPK---KEGQ 195
+L RPPK KEG+
Sbjct: 316 HKELLRFRRPPKSKSKEGE 334
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 18 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 77
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 78 LAYAE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIR 136
Query: 293 FVF 295
Sbjct: 137 LTL 139
>gi|60416032|gb|AAH90676.1| Glra4a protein [Danio rerio]
gi|262478805|gb|ACY68416.1| glycine receptor alpha 4a subunit [Danio rerio]
Length = 457
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V + + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLSDNPVQVADDLTLPQFVLK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y ++F Q W D RL E +
Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYSEYPDASL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L + L ++W+PD FF N K F +T N + ++++ +LY ++ +
Sbjct: 118 DL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLI 169
>gi|291385942|ref|XP_002709524.1| PREDICTED: Glycine receptor subunit alpha-3-like isoform 2
[Oryctolagus cuniculus]
Length = 449
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ + +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLGNFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
>gi|268833702|ref|NP_001161371.1| glycine receptor subunit alpha-2 precursor [Danio rerio]
gi|262478803|gb|ACY68415.1| glycine receptor alpha 2 subunit [Danio rerio]
Length = 448
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V + + LPQ +
Sbjct: 162 RLTLILSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLDKGPVQVADGLTLPQFLIR 221
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 222 DEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 281
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 282 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 321
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 44 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQKWNDPR 103
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E S L + L ++W+PD FF N K F +T N + ++KD T+LY ++
Sbjct: 104 LAYSEYPDSSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLYSIR 162
Query: 293 FVFM 296
+
Sbjct: 163 LTLI 166
>gi|14041786|emb|CAC38838.1| glycine receptor alphaZ4 subunit [Danio rerio]
Length = 426
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P DTQ C++Q+ES +T +DLIFQW E P+ V + + LPQ L
Sbjct: 98 RLTLILSCPMDLKNFPMDTQTCTVQLESFGYTMNDLIFQWLDEGPVQVADDLMLPQFVLK 157
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++ YYL YIP+ L VI+SWVSFWI +AAP
Sbjct: 158 EEKDLGYCAKHYNTGKFTCIEVKFHLERQMAYYLIQMYIPSLLTVILSWVSFWINMDAAP 217
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 218 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 257
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKN 253
G P V ++ + SI E +M Y ++F Q W D RL E + L+ L +
Sbjct: 1 GPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYKE-YPDDSLDLDPSMLDS 59
Query: 254 MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
+W+PD FF N K F +T N + ++++ +LY ++ +
Sbjct: 60 IWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLI 102
>gi|432877241|ref|XP_004073116.1| PREDICTED: glycine receptor subunit alpha-4-like [Oryzias latipes]
Length = 486
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V + + LPQ L
Sbjct: 155 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLSDNPVQVADDLTLPQFVLK 214
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 215 EEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 274
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 275 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 314
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y ++F Q W D R
Sbjct: 37 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQNWNDPR 96
Query: 233 L---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
L P+N L+ L ++W+PD FF N K F +T N + +++D ++LY
Sbjct: 97 LAYSEYPDNSLD----LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQDGSVLY 152
Query: 290 MVKFVFM 296
++ +
Sbjct: 153 SIRLTLI 159
>gi|291243991|ref|XP_002741883.1| PREDICTED: glycine receptor subunit alpha-2-like, partial
[Saccoglossus kowalevskii]
Length = 286
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 112/158 (70%)
Query: 7 LTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLVK 66
L+L LSC M +P D Q C +Q+ES TT DL+F+W P+ + +ELPQ ++
Sbjct: 1 LSLTLSCNMKLQRFPMDQQVCGVQLESYGFTTKDLLFEWKDVGPVQIAGNLELPQFNILG 60
Query: 67 NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPAR 126
+T C++ Y+TGN+TC+EV F R++GYYL TYIP+ LIVI+SWVSFWI E++PAR
Sbjct: 61 YRTLPCTKQYNTGNYTCVEVQFFFLRQMGYYLIQTYIPSMLIVILSWVSFWISAESSPAR 120
Query: 127 VTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
V LG+T++LT++TQ + + +LP VSY+KA+D +MS C
Sbjct: 121 VALGITTVLTMTTQSSGANETLPKVSYIKAIDIWMSVC 158
>gi|18858761|ref|NP_571857.1| glycine receptor subunit alpha-4 [Danio rerio]
gi|11322384|emb|CAC16687.1| glycine receptor alphaZ2 subunit [Danio rerio]
Length = 456
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V + + LPQ L
Sbjct: 164 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLSDNPVQVADDLTLPQFVLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y ++F Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L + L ++W+PD FF N K F +T N + ++++ +LY ++
Sbjct: 106 LAYSEYPDASLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIR 164
Query: 293 FVFM 296
+
Sbjct: 165 LTLI 168
>gi|301607542|ref|XP_002933371.1| PREDICTED: glycine receptor subunit alpha-3-like [Xenopus
(Silurana) tropicalis]
Length = 449
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W P+ + + + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQENGPVQIADGLTLPQFVLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 106 CLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACT 165
C++ +S FW EAA L ++ + T T A+S+ S P+S +D M +
Sbjct: 6 CILTAVSGFYFW---EAA-----LLLSLVATKETDSARSRPS--PMSPSDFLDKLMGRTS 55
Query: 166 VSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFA 225
YD P +G P V ++ V SI E +M Y +IF
Sbjct: 56 G-----------------YDARIRPNFKGPPVNVTCNIFVNSFGSIAETTMDYRLNIFLR 98
Query: 226 QTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
Q W D RL E + L+ L ++W+PD FF N K F +T N + ++KD
Sbjct: 99 QKWNDPRLAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKDG 157
Query: 286 TILYMVKF 293
+LY ++
Sbjct: 158 NVLYSIRL 165
>gi|291221981|ref|XP_002730997.1| PREDICTED: glycine receptor, alpha 2-like [Saccoglossus
kowalevskii]
Length = 437
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 115/159 (72%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL L L+C M+ +P D Q+C++Q ES TT DL+F+W P+ D ++LPQ +V
Sbjct: 152 RLLLTLTCMMSLQKFPMDRQQCAVQCESYGFTTKDLLFKWRDVEPIQRDSNLQLPQFDIV 211
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+T C++ Y+TGN+TC+E F++ R++GYY+ TYIP+ LIVI+SWVSFWI E++PA
Sbjct: 212 GTRTLLCTKQYNTGNYTCVEGRFIMTRQMGYYMIQTYIPSMLIVILSWVSFWISAESSPA 271
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV LG+T++LT++TQ + + +LP VSY+KA+D +M+ C
Sbjct: 272 RVALGITTVLTMTTQSSGANETLPKVSYVKAIDIWMAVC 310
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 60/139 (43%), Gaps = 2/139 (1%)
Query: 157 VDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSM 216
V + SA ++ ++ L + YD P G P V + V +DS+ E +M
Sbjct: 19 VASIQSAANMTQDERKQSEFLDNLFRNYDLRIRPNFNGPPVEVITDMFVSSMDSVQETTM 78
Query: 217 TYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPN 276
+Y DIF Q W D RL E S + L MW PD FF N K +T N
Sbjct: 79 SYTMDIFMRQQWNDPRLSFTEYNHSVS--VHTQLLNRMWFPDLFFPNEKRAYQHDVTTDN 136
Query: 277 HYVWLYKDKTILYMVKFVF 295
+ L+ + ILY V+ +
Sbjct: 137 KLLRLFPNGDILYSVRLLL 155
>gi|50746507|ref|XP_420527.1| PREDICTED: glycine receptor subunit alpha-3 [Gallus gallus]
Length = 463
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W + + V E + LPQ L
Sbjct: 180 RLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVAEGLTLPQFLLK 239
Query: 66 KNKT-ADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 240 EEKDLCYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 299
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 300 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 339
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E +
Sbjct: 73 YDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQNWNDPRLAYSE-YPDDS 131
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L+ L ++W+PD FF N K F +T N + ++K+ +LY ++ +
Sbjct: 132 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 184
>gi|326918628|ref|XP_003205590.1| PREDICTED: glycine receptor subunit alpha-3-like [Meleagris
gallopavo]
Length = 486
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W + + V E + LPQ L
Sbjct: 203 RLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVAEGLTLPQFLLK 262
Query: 66 KNKT-ADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 263 EEKDLCYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 322
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 323 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 362
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 3/156 (1%)
Query: 143 KSQASLPPVSYLKAVDAFMSACTVSS--TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVY 200
K + S+ PV L A SA + S + F D L YD P +G P V
Sbjct: 53 KYKVSIDPVPDLVATKETDSARSRSMPMSPSDFLDKLMGRMSGYDARIRPNFKGPPVNVT 112
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ + SI E +M Y +IF Q W D RL E + L+ L ++W+PD F
Sbjct: 113 CNIFINSFGSIAETTMDYRVNIFLRQNWNDPRLAYSE-YPDDSLDLDPSMLDSIWKPDLF 171
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
F N K F +T N + ++K+ +LY ++ +
Sbjct: 172 FANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 207
>gi|449267576|gb|EMC78502.1| Glycine receptor subunit alpha-3, partial [Columba livia]
Length = 359
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W + + V E + LPQ L
Sbjct: 76 RLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVAEGLTLPQFLLK 135
Query: 66 KNKT-ADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 136 EEKDLCYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 195
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 196 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 235
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 218 YAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNH 277
Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T N
Sbjct: 3 YRVNIFLRQNWNDPRLAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 61
Query: 278 YVWLYKDKTILYMVKFVFM 296
+ ++K+ +LY ++ +
Sbjct: 62 LLRIFKNGNVLYSIRLTLI 80
>gi|432933168|ref|XP_004081837.1| PREDICTED: glycine receptor subunit alpha-2-like [Oryzias latipes]
Length = 453
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + V E + LPQ +
Sbjct: 166 RLTLILSCPMDLKNFPMDVQTCTMQLESFGYTMNDLVFEWLEYGAVQVSEGLTLPQFIMK 225
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 226 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 285
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 286 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 48 FLDSLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 107
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L + S L + L ++W+PD FF N K F +T N + ++KD T+LY ++
Sbjct: 108 LAYSKYPDSSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLYSIR 166
Query: 293 FVFM 296
+
Sbjct: 167 LTLI 170
>gi|449269965|gb|EMC80700.1| Glycine receptor subunit alpha-4, partial [Columba livia]
Length = 432
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + + + V E + LPQ L
Sbjct: 132 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQEAVQVAEGLTLPQFIL 191
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 192 RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 251
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ A S+ASLP VSY+KA+D +M+ C
Sbjct: 252 PARVGLGITTVLTMTTQSAGSRASLPKVSYVKAIDIWMAVC 292
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 14 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 73
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K +F +T N + ++K+ +LY ++
Sbjct: 74 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGASFHEVTTDNKLLRIFKNGNVLYSIR 132
Query: 293 FVFM 296
+
Sbjct: 133 LTLI 136
>gi|410917370|ref|XP_003972159.1| PREDICTED: glycine receptor subunit alpha-3-like [Takifugu
rubripes]
Length = 510
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 113/160 (70%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W P+ V E + LPQ L
Sbjct: 204 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQENGPVQVAEGLTLPQFILK 263
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 264 DESDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 323
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ SLP VSY+KA+D +M+ C
Sbjct: 324 ARVALGITTVLTMTTQSSGSRTSLPKVSYVKAIDIWMAVC 363
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G V ++ + SI E +M Y +IF Q W D R
Sbjct: 86 FLDKLMGRTSGYDARIRPNFKGPAVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 145
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 146 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIR 204
Query: 293 FVF 295
Sbjct: 205 LTL 207
>gi|348536058|ref|XP_003455514.1| PREDICTED: glycine receptor subunit alpha-2 isoform 2 [Oreochromis
niloticus]
Length = 449
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + V E + LPQ +
Sbjct: 161 RLTLILSCPMDLKNFPMDVQTCTMQLESFGYTMNDLVFEWLENGAVQVSEGLTLPQFIMR 220
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 221 DEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 280
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 281 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 320
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 43 FLDSLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 102
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L + S L + L ++W+PD FF N K F +T N + ++KD T+LY ++
Sbjct: 103 LAYSKYPDSSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLYSIR 161
Query: 293 FVFM 296
+
Sbjct: 162 LTLI 165
>gi|348536056|ref|XP_003455513.1| PREDICTED: glycine receptor subunit alpha-2 isoform 1 [Oreochromis
niloticus]
Length = 449
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + V E + LPQ +
Sbjct: 161 RLTLILSCPMDLKNFPMDVQTCTMQLESFGYTMNDLVFEWLENGAVQVSEGLTLPQFIMR 220
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 221 DEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 280
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 281 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 320
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 43 FLDSLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQKWNDPR 102
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L + S L + L ++W+PD FF N K F +T N + ++KD T+LY ++
Sbjct: 103 LAYSKYPDSSLDL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLYSIR 161
Query: 293 FVFM 296
+
Sbjct: 162 LTLI 165
>gi|224098606|ref|XP_002187221.1| PREDICTED: glycine receptor subunit alpha-4 [Taeniopygia guttata]
Length = 418
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + + + V E + LPQ L
Sbjct: 127 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQEAVQVAEGLTLPQFIL 186
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 187 RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 246
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ A S+ASLP VSY+KA+D +M+ C
Sbjct: 247 PARVGLGITTVLTMTTQSAGSRASLPKVSYVKAIDIWMAVC 287
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y ++F Q W D RL E +
Sbjct: 20 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYRE-YPDDS 78
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L+ L ++W+PD FF N K F +T N + ++K+ +LY ++ +
Sbjct: 79 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 131
>gi|449500541|ref|XP_002188642.2| PREDICTED: glycine receptor subunit alpha-3 [Taeniopygia guttata]
Length = 434
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W + + V E + LPQ L
Sbjct: 143 RLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVAEGLTLPQFLLK 202
Query: 66 KNKT-ADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 203 EEKDLCYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 262
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 263 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 302
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E +
Sbjct: 36 YDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQNWNDPRLAYSE-YPDDS 94
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L+ L ++W+PD FF N K F +T N + ++K+ +LY ++ +
Sbjct: 95 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 147
>gi|403307748|ref|XP_003944345.1| PREDICTED: glycine receptor subunit alpha-4 [Saimiri boliviensis
boliviensis]
Length = 635
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 118/161 (73%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 343 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 402
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 403 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 462
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+AC
Sbjct: 463 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAAC 503
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 225 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 284
Query: 233 L---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
L P+N L+ L ++W+PD FF N K F +T N + ++K+ +LY
Sbjct: 285 LSYQEYPDNSLD----LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLY 340
Query: 290 MVKFVFM 296
++ +
Sbjct: 341 SIRLTLI 347
>gi|432952216|ref|XP_004085005.1| PREDICTED: glycine receptor subunit alpha-3-like [Oryzias latipes]
Length = 620
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 113/160 (70%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIFQW P+ V E + LPQ L
Sbjct: 325 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFQWQENGPVQVAEGLTLPQFILK 384
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 385 DESDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 444
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ SLP VSY+KA+D +M+ C
Sbjct: 445 ARVALGITTVLTMTTQSSGSRTSLPKVSYVKAIDIWMAVC 484
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Query: 148 LPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMG 207
L VS K +DA + A + F D L YD P +G P V ++ +
Sbjct: 182 LSVVSRCKEMDAAVRARHAPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINS 241
Query: 208 LDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAV 267
SI E +M Y +IF Q W D RL E + L+ L ++W+PD FF N K
Sbjct: 242 FGSIAETTMDYRVNIFLRQQWNDPRLAYAE-YPDDSLDLDPSMLDSIWKPDLFFANEKGA 300
Query: 268 TFQTMTIPNHYVWLYKDKTILYMVKFVF 295
F +T N + ++K+ +LY ++
Sbjct: 301 HFHEVTTDNKLLRIFKNGNVLYSIRLTL 328
>gi|327268587|ref|XP_003219078.1| PREDICTED: glycine receptor subunit alpha-3-like [Anolis
carolinensis]
Length = 462
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W + V + + LPQ L
Sbjct: 175 RLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQENGAVQVADGLTLPQFLLK 234
Query: 66 KNKT-ADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 235 EDKDLVYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 294
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 295 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 334
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E +
Sbjct: 68 YDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQNWNDPRLAYSE-YPDDS 126
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L+ L ++W+PD FF N K F +T N + ++K+ +LY ++ +
Sbjct: 127 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 179
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 29/119 (24%)
Query: 293 FVFMALMEYCLVNIV-LGDSDLPKPPEPAKQDKIFELAAKENARLLTGQPMIPP------ 345
FVF AL+EY VN V +L + K++K ++ +EN TG M PP
Sbjct: 337 FVFSALLEYAAVNFVSRQHKELLRFHRKRKKNKDDDM--RENRFSFTGYGMGPPCIPAKD 394
Query: 346 ----------------NHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+H++ ++ RA+ ID SR FP+ F I N YW+++
Sbjct: 395 GVAPKGPNNPTQPAPKSHEEMRKVFIDRAK----KIDTISRACFPLAFLIFNIFYWVIY 449
>gi|118089348|ref|XP_001232995.1| PREDICTED: glycine receptor subunit alpha-4-like [Gallus gallus]
Length = 435
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + + + V E + LPQ L
Sbjct: 144 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQEAVQVAEGLTLPQFIL 203
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 204 RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 263
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ A S+ASLP VSY+KA+D +M+ C
Sbjct: 264 PARVGLGITTVLTMTTQSAGSRASLPKVSYVKAIDIWMAVC 304
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 26 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 85
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 86 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 144
Query: 293 FVFM 296
+
Sbjct: 145 LTLI 148
>gi|297304473|ref|XP_001085545.2| PREDICTED: glycine receptor subunit alpha-4-like [Macaca mulatta]
Length = 457
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 107 LSYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 165
Query: 293 FVFM 296
+
Sbjct: 166 LTLI 169
>gi|355705027|gb|EHH30952.1| Glycine receptor subunit alpha-4 [Macaca mulatta]
gi|355757581|gb|EHH61106.1| Glycine receptor subunit alpha-4 [Macaca fascicularis]
Length = 453
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 161 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 220
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 221 RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 280
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 281 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 321
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 43 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 102
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 103 LSYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 161
Query: 293 FVFM 296
+
Sbjct: 162 LTLI 165
>gi|348537425|ref|XP_003456195.1| PREDICTED: glycine receptor subunit alpha-3-like [Oreochromis
niloticus]
Length = 455
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 138/217 (63%), Gaps = 5/217 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D+Q C++Q+ES +T +DLIF+W + V + + LPQ L
Sbjct: 134 RLTLTLSCPMDLKNFPMDSQTCTMQLESFGYTMNDLIFEWLDVGAVQVADDLMLPQFVLK 193
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ L VI+SWVSFWI +AAP
Sbjct: 194 EEKGLGYCTKHYNTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAP 253
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACT--VSSTSLTFN--DILPED 180
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C V + L + + +
Sbjct: 254 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQ 313
Query: 181 PKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMT 217
K + +M+ KE Q V + G + N+M+
Sbjct: 314 HKEFFRMKKKLKEQQQRTVSSVQSGTGDSKVKGNNMS 350
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y ++F Q W D R
Sbjct: 16 FLDKLMGRTSGYDARIRPNFKGSPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPR 75
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++++ +LY ++
Sbjct: 76 LAYKE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIR 134
Query: 293 F 293
Sbjct: 135 L 135
>gi|395546413|ref|XP_003775082.1| PREDICTED: glycine receptor subunit alpha-4 [Sarcophilus harrisii]
Length = 470
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 166 RLTLVLSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 225
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 226 RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 285
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 286 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 326
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 48 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFSSVTETTMDYRVNVFLRQQWNDPR 107
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ ++LY ++
Sbjct: 108 LAYLE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGSVLYSIR 166
Query: 293 FVFM 296
+
Sbjct: 167 LTLV 170
>gi|301623311|ref|XP_002940962.1| PREDICTED: glycine receptor subunit alpha-1-like, partial [Xenopus
(Silurana) tropicalis]
Length = 354
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL L+C M+ +P D Q C +Q+ES +T +DLIF+W+ + V E + LPQ L
Sbjct: 160 RLTLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWEEVGAVQVAEGLTLPQFILK 219
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ YSTG FTC+E F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 220 EEKDLRYCTKHYSTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 279
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 280 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 319
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 42 FLDKLMGKISGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRLNIFLRQQWNDPR 101
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 102 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEITTDNKLLRIFKNGNVLYSIR 160
Query: 293 F 293
Sbjct: 161 L 161
>gi|20750081|gb|AAM23269.1| glycine-gated ion channel alpha1 subunit [Morone americana]
Length = 448
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+WD + + V + + LPQ L
Sbjct: 160 RITLILACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFLLK 219
Query: 66 KNKT-ADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 220 EEKDLRHCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 279
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 280 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 319
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Query: 132 TSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFN-DILPEDPKLYDKMRPP 190
TS+ +++ A ++ + P+ + +D M + + N + +DPK K
Sbjct: 1 TSISLAASKEAAARKATTPMPPSEFLDKLMGKVSGYDARIRPNFKVYNKDPK-GSKNEAT 59
Query: 191 KKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDW 250
K+G P V ++ + SI E +M Y +IF Q W D RL E + L+
Sbjct: 60 HKKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSE-YPDDSLDLDPSM 118
Query: 251 LKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L ++W+PD FF N K F +T N + + K+ +LY ++ +
Sbjct: 119 LDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLI 164
>gi|410896852|ref|XP_003961913.1| PREDICTED: glycine receptor subunit alpha-2-like [Takifugu
rubripes]
Length = 454
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + V + + LPQ +
Sbjct: 167 RLTLILSCPMDLKNFPMDVQTCTMQLESFGYTMNDLVFEWLENGAVQVSDGLTLPQFIMR 226
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 227 DEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 286
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 287 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 326
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 49 FLDSLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 108
Query: 233 L---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
L + P+ L+ L ++W+PD FF N K F +T N + ++K+ +LY
Sbjct: 109 LAYSKYPDPSLD----LDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKNGNVLY 164
Query: 290 MVKFVFM 296
++ +
Sbjct: 165 SIRLTLI 171
>gi|348570472|ref|XP_003471021.1| PREDICTED: glycine receptor subunit alpha-4 [Cavia porcellus]
Length = 457
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKNYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 107 LAYQE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 165
Query: 293 FVFM 296
+
Sbjct: 166 LTLI 169
>gi|296236079|ref|XP_002763171.1| PREDICTED: glycine receptor subunit alpha-4 [Callithrix jacchus]
Length = 452
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 160 RLTLVLSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 219
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 220 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 279
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 280 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 320
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 42 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 101
Query: 233 L---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
L P+N L+ L ++W+PD FF N K +F +T N + ++K+ +LY
Sbjct: 102 LSYQEYPDNSLD----LDPSMLDSIWKPDLFFANEKGASFHEVTTDNKLLRIFKNGNVLY 157
Query: 290 MVKFVFM 296
++ +
Sbjct: 158 SIRLTLV 164
>gi|23308635|ref|NP_694497.1| glycine receptor subunit alpha-3 precursor [Danio rerio]
gi|14041784|emb|CAC38837.1| glycine receptor alphaZ3 subunit [Danio rerio]
Length = 450
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 114/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W + P+ V + + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGPVQVADGLTLPQFILK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 DESDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ SLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRTSLPKVSYVKAIDIWMAVC 323
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E +
Sbjct: 57 YDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSE-YPDDS 115
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVF 295
L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTL 167
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 30/120 (25%)
Query: 293 FVFMALMEYCLVNIV----------------------LGDSDLPKPPEPAKQDKIFELAA 330
FVF AL+EY VN V + +S L P K + + A
Sbjct: 326 FVFSALLEYAAVNFVSRQHKELLRFRRRRKKSGKEEEVRESRLSFTPNAGKDGAVPKTA- 384
Query: 331 KENARLLTGQPMIPPN--HQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
NA +P + P H++ ++ RA+ ID SR FP+ F N YW+++
Sbjct: 385 -NNAATTPSEPAVAPGKSHEEMRKLFIDRAK----KIDTVSRAGFPLAFLFFNIFYWVLY 439
>gi|344286252|ref|XP_003414873.1| PREDICTED: glycine receptor subunit alpha-4-like [Loxodonta
africana]
Length = 458
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 166 RLTLILSCPMDLKNFPMDIQTCAMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 225
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 226 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 285
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 286 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 326
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 48 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 107
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 108 LAYQE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 166
Query: 293 FVFM 296
+
Sbjct: 167 LTLI 170
>gi|327287938|ref|XP_003228685.1| PREDICTED: glycine receptor subunit alpha-4-like [Anolis
carolinensis]
Length = 472
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C +Q+ES +T +DLIFQW + + V E + LPQ L
Sbjct: 167 RLTLILSCPMDLKNFPMDIQTCIMQLESFGYTMNDLIFQWVKGQEAVQVAEGLTLPQFIL 226
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 227 RDEKDLGYCTKSYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 286
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ A S+ASLP VSY+KA+D +M+ C
Sbjct: 287 PARVGLGITTVLTMTTQSAGSRASLPKVSYVKAIDIWMAVC 327
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 49 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 108
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 109 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 167
Query: 293 FVFM 296
+
Sbjct: 168 LTLI 171
>gi|74008431|ref|XP_549155.2| PREDICTED: glycine receptor subunit alpha-4 [Canis lupus
familiaris]
Length = 457
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 118/161 (73%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV+LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVSLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 107 LAYQE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 165
Query: 293 FVFM 296
+
Sbjct: 166 LTLI 169
>gi|18858759|ref|NP_571477.1| glycine receptor subunit alphaZ1 precursor [Danio rerio]
gi|6647527|sp|O93430.1|GLRA1_DANRE RecName: Full=Glycine receptor subunit alphaZ1; Flags: Precursor
gi|3378596|emb|CAA06711.1| glycine receptor, alphaZ1 subunit [Danio rerio]
gi|190339620|gb|AAI62943.1| Glycine receptor, alpha 1 [Danio rerio]
gi|190339628|gb|AAI62956.1| Glycine receptor, alpha 1 [Danio rerio]
Length = 444
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+WD + + V + + LPQ L
Sbjct: 155 RITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILK 214
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 215 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 274
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 275 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 314
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E +
Sbjct: 48 YDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSE-YPDDS 106
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIR 155
>gi|402910975|ref|XP_003918120.1| PREDICTED: glycine receptor subunit alpha-4 [Papio anubis]
Length = 457
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 161 MSACTVSSTSLT---FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMT 217
+ + T S S++ F D L YD P +G P V ++ + S+ E +M
Sbjct: 32 VKSGTKGSQSMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMD 91
Query: 218 YAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNH 277
Y ++F Q W D RL E + L+ L ++W+PD FF N K F +T N
Sbjct: 92 YRVNVFLRQQWNDPRLSYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 150
Query: 278 YVWLYKDKTILYMVKFVFM 296
+ ++K+ +LY ++ +
Sbjct: 151 LLRIFKNGNVLYSIRLTLI 169
>gi|19881338|gb|AAM00910.1|AF488379_1 glycine receptor alphaZ1L subunit [Danio rerio]
Length = 459
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+WD + + V + + LPQ L
Sbjct: 170 RITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILK 229
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 230 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 289
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 290 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 329
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 192 KEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWL 251
K+G P V ++ + SI E +M Y +IF Q W D RL E + L+ L
Sbjct: 71 KKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSE-YPDDSLDLDPSML 129
Query: 252 KNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
++W+PD FF N K F +T N + + K+ +LY ++ +
Sbjct: 130 DSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLV 174
>gi|311276712|ref|XP_003135319.1| PREDICTED: glycine receptor subunit alpha-4-like [Sus scrofa]
Length = 457
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 107 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 165
Query: 293 FVFM 296
+
Sbjct: 166 LTLI 169
>gi|395860492|ref|XP_003802546.1| PREDICTED: glycine receptor subunit alpha-4 [Otolemur garnettii]
Length = 457
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 107 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 165
Query: 293 FVFM 296
+
Sbjct: 166 LTLI 169
>gi|338729463|ref|XP_001489094.3| PREDICTED: glycine receptor subunit alpha-4-like [Equus caballus]
Length = 457
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 107 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 165
Query: 293 FVFM 296
+
Sbjct: 166 LTLI 169
>gi|301781106|ref|XP_002925968.1| PREDICTED: glycine receptor subunit alpha-4-like [Ailuropoda
melanoleuca]
Length = 457
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 107 LAYLE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 165
Query: 293 FVFM 296
+
Sbjct: 166 LTLI 169
>gi|190337591|gb|AAI63529.1| Glycine receptor, alpha 3 [Danio rerio]
Length = 450
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 114/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W + P+ V + + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGPVQVADGLTLPQFILK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 DESDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ SLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRTSLPKVSYVKAIDIWMAVC 323
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E +
Sbjct: 57 YDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSE-YPDDS 115
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVF 295
L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTL 167
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 30/120 (25%)
Query: 293 FVFMALMEYCLVNIV----------------------LGDSDLPKPPEPAKQDKIFELAA 330
FVF AL+EY VN V + +S L P K + + A
Sbjct: 326 FVFSALLEYAAVNFVSRQHKELLRFRRRRKKSGKEEEVRESRLSFTPNAGKDGAVPKTA- 384
Query: 331 KENARLLTGQPMIPPN--HQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
NA +P + P H++ ++ RA+ ID SR FP+ F N YW+++
Sbjct: 385 -NNAATTPSEPAVAPGKSHEEMRKLFIDRAK----KIDTVSRAGFPLAFLFFNIFYWVLY 439
>gi|426396913|ref|XP_004064673.1| PREDICTED: glycine receptor subunit alpha-4 [Gorilla gorilla
gorilla]
Length = 457
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTADC-SQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C ++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFSSVTETTMDYRVNVFLRQQWNDPR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 107 LSYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 165
Query: 293 FVFM 296
+
Sbjct: 166 LTLI 169
>gi|297710654|ref|XP_002831982.1| PREDICTED: glycine receptor subunit alpha-4 [Pongo abelii]
Length = 458
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCAMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTADC-SQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C ++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFSSVTETTMDYRVNVFLRQQWNDPR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 107 LSYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 165
Query: 293 FVFM 296
+
Sbjct: 166 LTLI 169
>gi|281342623|gb|EFB18207.1| hypothetical protein PANDA_015554 [Ailuropoda melanoleuca]
Length = 397
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 145 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 204
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 205 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 264
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 265 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 305
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y ++F Q W D RL E +
Sbjct: 38 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYLE-YPDDS 96
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L+ L ++W+PD FF N K F +T N + ++K+ +LY ++ +
Sbjct: 97 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 149
>gi|351707180|gb|EHB10099.1| Glycine receptor subunit alpha-4 [Heterocephalus glaber]
Length = 488
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 196 RLTLMLSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 255
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 256 RDEKDLGYCTKNYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 315
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 316 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 356
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 78 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYWVNVFLRQQWNDPR 137
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 138 LAYQE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 196
Query: 293 FVFM 296
M
Sbjct: 197 LTLM 200
>gi|332861324|ref|XP_521197.3| PREDICTED: glycine receptor subunit alpha-4 [Pan troglodytes]
gi|397497800|ref|XP_003819692.1| PREDICTED: glycine receptor subunit alpha-4 [Pan paniscus]
Length = 457
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTADC-SQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C ++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFSSVTETTMDYRVNVFLRQQWNDPR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 107 LSYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 165
Query: 293 FVFM 296
+
Sbjct: 166 LTLI 169
>gi|395817720|ref|XP_003782304.1| PREDICTED: glycine receptor subunit alpha-1 [Otolemur garnettii]
Length = 590
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 118/165 (71%), Gaps = 1/165 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+ S +R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LP
Sbjct: 296 LPSLFRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLP 355
Query: 61 QLQLVKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIK 119
Q L + K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI
Sbjct: 356 QFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWIN 415
Query: 120 PEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+AAPARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 416 MDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 460
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 64/150 (42%), Gaps = 2/150 (1%)
Query: 138 STQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPT 197
T K +P ++ K +A SA S S F D L YD P +G P
Sbjct: 147 GTGSGKEVYRVPSLAASKEAEAARSAPKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPV 205
Query: 198 IVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRP 257
V ++ + SI E +M Y +IF Q W D RL E + L+ L ++W+P
Sbjct: 206 NVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKP 264
Query: 258 DSFFKNAKAVTFQTMTIPNHYVWLYKDKTI 287
D FF N K F +T N + +Y +I
Sbjct: 265 DLFFANEKGAHFHEITTDNKLLXVYGSSSI 294
>gi|344256890|gb|EGW12994.1| Glycine receptor subunit alpha-4 [Cricetulus griseus]
Length = 455
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 163 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFIL 222
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 223 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 282
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 283 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 12/124 (9%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M W D R
Sbjct: 56 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTM-----------WNDPR 104
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 105 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 163
Query: 293 FVFM 296
+
Sbjct: 164 LTLI 167
>gi|817957|emb|CAA53468.1| glycine receptor subunit alpha 4 [Mus musculus]
Length = 337
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 141 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFIL 200
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 201 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 260
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 261 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 301
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 23 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 82
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 83 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 141
Query: 293 FVFM 296
+
Sbjct: 142 LTLI 145
>gi|194248074|ref|NP_034427.2| glycine receptor subunit alpha-4 precursor [Mus musculus]
gi|78099775|sp|Q61603.3|GLRA4_MOUSE RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor
gi|70997254|gb|AAZ17380.1| glycine receptor alpha4 subunit [Mus musculus]
Length = 456
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 164 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFIL 223
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 224 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 283
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
Query: 293 FVFM 296
+
Sbjct: 165 LTLI 168
>gi|149033178|gb|EDL87985.1| similar to Glycine receptor alpha-4 chain precursor (predicted)
[Rattus norvegicus]
Length = 416
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 124 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFIL 183
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 184 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 243
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 244 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 284
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 6 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 65
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 66 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 124
Query: 293 FVFM 296
+
Sbjct: 125 LTLI 128
>gi|18448711|gb|AAL69899.1|AF462147_1 glycine receptor alpha 4 subunit [Mus musculus]
Length = 416
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 124 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFIL 183
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 184 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 243
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 244 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 284
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 6 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 65
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L L+++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 66 LAYRE-YPDDSLDLNPSMLESIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 124
Query: 293 FVFM 296
+
Sbjct: 125 LTLI 128
>gi|354499886|ref|XP_003512035.1| PREDICTED: glycine receptor subunit alpha-4 [Cricetulus griseus]
Length = 416
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 124 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFIL 183
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 184 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 243
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 244 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 284
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 6 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 65
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 66 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 124
Query: 293 FVFM 296
+
Sbjct: 125 LTLI 128
>gi|431899510|gb|ELK07476.1| Glycine receptor subunit alpha-4 [Pteropus alecto]
Length = 454
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 25/192 (13%)
Query: 105 TCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
T L I+S++ W PE RV L + K + P +L + S
Sbjct: 3 TRLPAILSFLLLWTLPEQILLRVALAKEEV----ESGTKGSQPMSPSDFLDKLMGRTSG- 57
Query: 165 TVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFF 224
YD P +G P V ++ + S+ E +M Y ++F
Sbjct: 58 -------------------YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFL 98
Query: 225 AQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKD 284
Q W D RL E + L+ L ++W+PD FF N K F +T N + ++K+
Sbjct: 99 RQQWNDPRLAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKN 157
Query: 285 KTILYMVKFVFM 296
+LY ++ +
Sbjct: 158 GNVLYSIRLTLI 169
>gi|300793839|ref|NP_001178843.1| glycine receptor subunit alpha-4 precursor [Rattus norvegicus]
Length = 456
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 164 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFIL 223
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 224 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 283
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
Query: 293 FVFM 296
+
Sbjct: 165 LTLI 168
>gi|83405071|gb|AAI10631.1| Glycine receptor, alpha 4 subunit [Mus musculus]
gi|148691927|gb|EDL23874.1| glycine receptor, alpha 4 subunit [Mus musculus]
Length = 416
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 124 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFIL 183
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 184 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 243
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 244 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 284
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 6 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 65
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 66 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 124
Query: 293 FVFM 296
+
Sbjct: 125 LTLI 128
>gi|426257803|ref|XP_004022512.1| PREDICTED: glycine receptor subunit alpha-4 [Ovis aries]
Length = 457
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 107 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 165
Query: 293 FVFM 296
+
Sbjct: 166 LTLI 169
>gi|440906155|gb|ELR56457.1| Glycine receptor subunit alpha-4 [Bos grunniens mutus]
Length = 457
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 107 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 165
Query: 293 FVFM 296
+
Sbjct: 166 LTLI 169
>gi|291408013|ref|XP_002720405.1| PREDICTED: glycine receptor, alpha 4 subunit-like [Oryctolagus
cuniculus]
Length = 457
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+E + +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLERVGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 107 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 165
Query: 293 FVFM 296
+
Sbjct: 166 LTLI 169
>gi|348520330|ref|XP_003447681.1| PREDICTED: glycine receptor subunit alphaZ1-like [Oreochromis
niloticus]
Length = 504
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+WD + + V + + LPQ L
Sbjct: 216 RITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDKKGAVQVADGLTLPQFILK 275
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 276 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 335
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 336 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 375
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 131 VTSLLTLSTQHAKSQAS--LPPVSYLKAVDAFMSACTVSSTSLTFN-DILPEDPKLYDKM 187
V +L S + A +A+ +PP +L D M + + N + +DPK K
Sbjct: 57 VCRILAASKEAAARKAASPMPPSEFL---DKLMGKVSGYDARIRPNFKVWNKDPK-GSKN 112
Query: 188 RPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLE 247
K+G P V ++ + SI E +M Y +IF Q W D RL E + L+
Sbjct: 113 EATHKKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSE-YPDDSLDLD 171
Query: 248 VDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L ++W+PD FF N K F +T N + + K+ +LY ++ +
Sbjct: 172 PSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLV 220
>gi|291233005|ref|XP_002736450.1| PREDICTED: Glycine receptor, alpha 3-like [Saccoglossus
kowalevskii]
Length = 446
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 115/161 (71%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R +L LSC M+F +P D Q C + MES +TTDDL+F WD P+ +++ + LPQ +
Sbjct: 153 RYSLTLSCYMDFKKFPLDDQVCGMTMESYGYTTDDLLFLWDEPDPVQMEDNLTLPQYVIQ 212
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T +C++ Y TG+FTCL+V+F L R +GYY+ Y+P+ L+V++SWV+FWI +AAPA
Sbjct: 213 KTTTENCTKSYITGSFTCLQVLFFLHRDVGYYILQAYLPSILLVVLSWVAFWITYDAAPA 272
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV LGVT++LT++T + +A+LP V+Y KA+D +M+ C V
Sbjct: 273 RVALGVTTILTMTTLDSGIRATLPKVAYAKAIDIWMAVCQV 313
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P +G P I+ ++ + DS+ E++M Y IF + W D RL+ + ++
Sbjct: 48 YDKRFRPNMKGPPVIITLNLFISSFDSVTESTMDYGVLIFLREQWNDPRLQFND---TDP 104
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
++ D N+W+PD +F N K+ +T N + ++ + IL ++
Sbjct: 105 MVMHGDAATNLWKPDLYFSNEKSGHLHDVTTENRLLRIHPNGDILLSSRY 154
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 32/132 (24%)
Query: 293 FVFMALMEYCLVN------------IVLGDSDLPK-------------PPEPAKQDKIFE 327
FVF AL+E+ +VN ++ D PK P+ +D + +
Sbjct: 314 FVFSALVEFAVVNYVHVLRTKRRQELIQQQQDKPKLDHKAKAKDNYGYEPDEDGKDNVRQ 373
Query: 328 LAAKENA-RLLTGQPMIPPNHQQAQRNLAQR---ARTRAIN---IDRFSRVFFPVLFAIL 380
A+ E A R +T + + + +L+ R AR ++ IDR S++ FP+ FAI
Sbjct: 374 RASIETANRKMTFREAVLKVTELQNGDLSHRDLEARDFFVDAKFIDRLSQICFPIAFAIF 433
Query: 381 NCTYWIMFAEFL 392
N YWI F F+
Sbjct: 434 NLAYWITFFLFV 445
>gi|47215075|emb|CAG04529.1| unnamed protein product [Tetraodon nigroviridis]
Length = 422
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+WD + + V + + LPQ L
Sbjct: 134 RITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILK 193
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 194 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 253
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 254 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 293
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 246 LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L+ L ++W+PD FF N K F +T N + + K+ +LY ++ +
Sbjct: 88 LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLV 138
>gi|395504924|ref|XP_003756796.1| PREDICTED: glycine receptor subunit alpha-1 [Sarcophilus harrisii]
Length = 450
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIFQW + + V + + LPQ L
Sbjct: 160 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFQWQEQGAVQVADDLTLPQFILK 219
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 220 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 279
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 280 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 319
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 42 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 101
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 102 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 160
>gi|410915546|ref|XP_003971248.1| PREDICTED: glycine receptor subunit alpha-3-like [Takifugu
rubripes]
Length = 460
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D+Q C++Q+ES +T +DLIF+W + V + + LPQ L
Sbjct: 134 RLTLILSCPMDLKNFPMDSQTCTMQLESFGYTMNDLIFEWLDVGAVQVADDLMLPQFVLK 193
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ L VI+SWVSFWI +AAP
Sbjct: 194 EEKGLGYCTKHYNTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAP 253
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 254 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 293
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y ++F Q W D R
Sbjct: 16 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPR 75
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++++ +LY ++
Sbjct: 76 LAYKE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIR 134
Query: 293 FVFM 296
+
Sbjct: 135 LTLI 138
>gi|432899526|ref|XP_004076602.1| PREDICTED: glycine receptor subunit alpha-2-like [Oryzias latipes]
Length = 505
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D+Q C++Q+ES +T +DLIF+W + V + + LPQ L
Sbjct: 181 RLTLILSCPMDLKNFPMDSQMCTMQLESFGYTMNDLIFEWLDVGAVQVADDLMLPQFVLK 240
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ L VI+SWVSFWI +AAP
Sbjct: 241 EEKGLGYCTKYYNTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAP 300
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 301 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 340
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y ++F Q W D R
Sbjct: 63 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPR 122
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++++ +LY ++
Sbjct: 123 LAYKE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIR 181
Query: 293 FVFM 296
+
Sbjct: 182 LTLI 185
>gi|119575082|gb|EAW54695.1| hCG17971 [Homo sapiens]
Length = 458
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCLMDLKNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTADC-SQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C ++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ + +M Y ++F Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFSSVTKTTMDYRVNVFLRQQWNDPR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 107 LSYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 165
Query: 293 FVFMALMEYCLVNI 306
+ L+ CL+++
Sbjct: 166 ---LTLILSCLMDL 176
>gi|334311152|ref|XP_001379288.2| PREDICTED: glycine receptor subunit alpha-1-like [Monodelphis
domestica]
Length = 532
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIFQW + + V + + LPQ L
Sbjct: 242 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFQWQEQGAVQVADDLTLPQFILK 301
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 302 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 361
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 362 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 401
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 124 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 183
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 184 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 242
>gi|444520572|gb|ELV13027.1| Glycine receptor subunit alpha-4 [Tupaia chinensis]
Length = 452
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 160 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 219
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 220 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 279
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 280 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 320
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 218 YAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNH 277
Y ++F Q W D RL E + L+ L ++W+PD FF N K F +T N
Sbjct: 87 YRVNVFLRQQWNDPRLAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNK 145
Query: 278 YVWLYKDKTILYMVKFVFM 296
+ ++K+ +LY ++ +
Sbjct: 146 LLRIFKNGNVLYSIRLTLI 164
>gi|218156328|ref|NP_001019623.2| glycine receptor subunit alpha-4 isoform 1 precursor [Homo sapiens]
gi|262527577|sp|Q5JXX5.3|GLRA4_HUMAN RecName: Full=Glycine receptor subunit alpha-4; Flags: Precursor
Length = 417
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCLMDLKNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTADC-SQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C ++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI + +M Y ++F Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFSSITKTTMDYRVNVFLRQQWNDPR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 107 LSYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 165
Query: 293 FVFMALMEYCLVNI 306
+ L+ CL+++
Sbjct: 166 ---LTLILSCLMDL 176
>gi|432094422|gb|ELK25993.1| Glycine receptor subunit alpha-4 [Myotis davidii]
Length = 472
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C +Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 184 RLTLILSCPMDLKNFPMDIQTCIMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 243
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 244 RDEKDLSYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 303
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 304 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 344
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 66 FLDKLMGQTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWHDPR 125
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 126 LAYQE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 184
Query: 293 FVFM 296
+
Sbjct: 185 LTLI 188
>gi|327279422|ref|XP_003224455.1| PREDICTED: glycine receptor subunit alpha-1-like [Anolis
carolinensis]
Length = 548
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + E + LPQ L
Sbjct: 258 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFKWQKANAVQIAEGLTLPQFILK 317
Query: 66 KNKT-ADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K DC++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 318 EEKDLRDCTKEYNTGMFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 377
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 378 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 417
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF QTW D R
Sbjct: 140 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQTWNDPR 199
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 200 LAYHE-FPDDALDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISKNGNVLYSIR 258
>gi|47222620|emb|CAG02985.1| unnamed protein product [Tetraodon nigroviridis]
Length = 432
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D+Q C++Q+ES +T +DLIF+W + V + + LPQ L
Sbjct: 119 RLTLILSCPMDLKNFPMDSQTCTMQLESFGYTMNDLIFEWLDVGAVQVADDLMLPQFVLK 178
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ L VI+SWVSFWI +AAP
Sbjct: 179 EEKGLGYCTKHYNTGKFTCIEVKFYLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAP 238
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 239 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 278
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 212 DENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQT 271
D S Y ++F Q W D RL E + L+ L ++W+PD FF N K F
Sbjct: 40 DPTSKDYRLNVFLRQQWNDPRLAYKE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHE 98
Query: 272 MTIPNHYVWLYKDKTILYMVKFVFM 296
+T N + ++++ +LY ++ +
Sbjct: 99 VTTDNKLLRIFQNGNVLYSIRLTLI 123
>gi|431918064|gb|ELK17292.1| Glycine receptor subunit alpha-1 [Pteropus alecto]
Length = 443
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 153 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 212
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 213 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 273 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 312
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 35 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 94
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 95 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 153
>gi|410949419|ref|XP_003981419.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Felis catus]
Length = 449
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K DA SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEADAARSAPKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
>gi|149052672|gb|EDM04489.1| glycine receptor, alpha 1 subunit, isoform CRA_c [Rattus
norvegicus]
Length = 366
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 76 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 135
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 136 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 195
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 196 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 235
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 1 MDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTD 59
Query: 276 NHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 60 NKLLRISRNGNVLYSIR 76
>gi|301770749|ref|XP_002920804.1| PREDICTED: glycine receptor subunit alpha-1-like [Ailuropoda
melanoleuca]
Length = 469
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 179 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 238
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 239 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 298
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 299 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 338
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 61 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 120
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 121 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 179
>gi|426229946|ref|XP_004009044.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Ovis aries]
Length = 449
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +A SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEAEAARSASKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
>gi|149726162|ref|XP_001503682.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Equus
caballus]
Length = 457
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|31982694|ref|NP_065238.2| glycine receptor subunit alpha-1 precursor [Mus musculus]
gi|9247215|gb|AAB32157.2| inhibitory glycine receptor alpha 1 subunit short form [Mus sp.]
gi|22535390|gb|AAM97291.1| glycine receptor alpha 1 subunit [Mus musculus]
gi|124297278|gb|AAI31950.1| Glycine receptor, alpha 1 subunit [Mus musculus]
gi|187952699|gb|AAI37726.1| Glycine receptor, alpha 1 subunit [Mus musculus]
Length = 449
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|410949423|ref|XP_003981421.1| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Felis catus]
Length = 366
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 76 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 135
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 136 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 195
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 196 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 235
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 1 MDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTD 59
Query: 276 NHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 60 NKLLRISRNGNVLYSIR 76
>gi|302565620|ref|NP_001181426.1| glycine receptor subunit alpha-1 precursor [Macaca mulatta]
gi|73953614|ref|XP_546290.2| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Canis lupus
familiaris]
Length = 449
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|296193297|ref|XP_002744456.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Callithrix
jacchus]
Length = 449
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|6980950|ref|NP_037265.1| glycine receptor subunit alpha-1 precursor [Rattus norvegicus]
gi|220751|dbj|BAA00707.1| glycine receptor alpha 1 precursor [Rattus norvegicus]
gi|13548655|emb|CAC35978.1| glycine receptor alpha 1 precursor [Rattus norvegicus]
gi|149052671|gb|EDM04488.1| glycine receptor, alpha 1 subunit, isoform CRA_b [Rattus
norvegicus]
Length = 449
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K DA SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEADAARSAPKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
>gi|297676457|ref|XP_002816152.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pongo
abelii]
Length = 449
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|31851|emb|CAA36258.1| inhibitory glycine receptor [Homo sapiens]
Length = 449
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +A SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEAEAARSATKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
>gi|291387674|ref|XP_002710218.1| PREDICTED: glycine receptor, alpha 1 (startle
disease/hyperekplexia, stiff man syndrome)-like
[Oryctolagus cuniculus]
Length = 449
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 152 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 211
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 212 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 271
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 272 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 311
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 18/167 (10%)
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD 185
RV +T+ L S + ++++ P+S +D M + YD
Sbjct: 4 RVANALTASLAASKEAEAARSAPKPMSPSDFLDKLMGRTSG-----------------YD 46
Query: 186 KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRL 245
P +G P V ++ + SI E +M Y +IF Q W D RL E +
Sbjct: 47 ARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNE-YPDDSLD 105
Query: 246 LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 106 LDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 152
>gi|148675854|gb|EDL07801.1| glycine receptor, alpha 1 subunit [Mus musculus]
Length = 430
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 140 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 199
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 200 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 259
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 260 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 299
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 22 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 81
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 82 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 140
>gi|410949421|ref|XP_003981420.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Felis catus]
Length = 457
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K DA SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEADAARSAPKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
>gi|403285576|ref|XP_003934098.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 457
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|297295509|ref|XP_002804635.1| PREDICTED: glycine receptor subunit alpha-1-like isoform 2 [Macaca
mulatta]
gi|345799501|ref|XP_003434572.1| PREDICTED: glycine receptor subunit alpha-1 [Canis lupus
familiaris]
gi|355691772|gb|EHH26957.1| hypothetical protein EGK_17048 [Macaca mulatta]
gi|355750348|gb|EHH54686.1| hypothetical protein EGM_15574 [Macaca fascicularis]
Length = 457
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|296193299|ref|XP_002744457.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Callithrix
jacchus]
Length = 457
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|11890617|gb|AAG41141.1| glycine receptor alpha 1 subunit isoform a [Bos taurus]
Length = 457
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +A SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEAEAARSASKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D R E + L+ L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRXAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + ++ +LY ++
Sbjct: 142 DNKLXRISRNGNVLYSIR 159
>gi|56181507|gb|AAV83800.1| glycine receptor alpha 1 variant [Rattus norvegicus]
Length = 419
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K DA SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEADAARSAPKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
>gi|350594490|ref|XP_003134181.3| PREDICTED: glycine receptor subunit alpha-1-like isoform 1 [Sus
scrofa]
Length = 456
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +A SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEAEAARSASKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
>gi|281339746|gb|EFB15330.1| hypothetical protein PANDA_009579 [Ailuropoda melanoleuca]
Length = 435
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 145 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 204
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 205 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 264
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 265 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 304
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 27 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 86
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 87 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 145
>gi|225659|prf||1309300A Gly receptor
Length = 427
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 137 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 196
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 197 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 256
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 257 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 296
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K DA SA S S F D L YD P +G P V ++ + SI E
Sbjct: 2 KEADAARSAPKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 60
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 61 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 119
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 120 DNKLLRISRNGNVLYSIR 137
>gi|149726160|ref|XP_001503680.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Equus
caballus]
Length = 449
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|5725305|emb|CAB52398.1| unnamed protein product [Mus musculus]
Length = 457
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E ++ Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTIDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|12644459|sp|Q64018.2|GLRA1_MOUSE RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|9247216|gb|AAB32158.2| inhibitory glycine receptor alpha 1 subunit long form [Mus sp.]
Length = 457
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|403285574|ref|XP_003934097.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 449
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|755778|emb|CAA68378.1| glycine receptor strychnine binding subunit [Rattus norvegicus]
Length = 427
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 137 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 196
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 197 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 256
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 257 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 296
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 63/138 (45%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K VDA SA S S F D L YD P +G P V ++ + SI E
Sbjct: 2 KEVDAARSAPKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 60
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 61 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 119
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 120 DNKLLRISRNGNVLYSIR 137
>gi|297676459|ref|XP_002816153.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Pongo
abelii]
Length = 457
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|12230887|sp|P07727.4|GLRA1_RAT RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|56469|emb|CAA38987.1| inhibitory glycine receptor alpha-1 subunit [Rattus norvegicus]
gi|13548657|emb|CAC35979.1| glycine receptor alpha 1 [Rattus norvegicus]
gi|149052670|gb|EDM04487.1| glycine receptor, alpha 1 subunit, isoform CRA_a [Rattus
norvegicus]
Length = 457
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K DA SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEADAARSAPKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
>gi|426229948|ref|XP_004009045.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Ovis aries]
Length = 457
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +A SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEAEAARSASKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
>gi|5725306|emb|CAB52399.1| unnamed protein product [Mus musculus]
Length = 449
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E ++ Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTIDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|11890616|gb|AAG41140.1| glycine receptor alpha 1 subunit isoform b [Bos taurus]
Length = 449
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +A SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEAEAARSASKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D R E + L+ L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRXAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + ++ +LY ++
Sbjct: 142 DNKLXRISRNGNVLYSIR 159
>gi|27805793|ref|NP_776746.1| glycine receptor subunit alpha-1 precursor [Bos taurus]
gi|12644526|sp|P57695.1|GLRA1_BOVIN RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|10180959|gb|AAG14346.1|AF268375_1 glycine receptor alpha 1 subunit [Bos taurus]
gi|296485141|tpg|DAA27256.1| TPA: glycine receptor subunit alpha-1 precursor [Bos taurus]
Length = 457
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +A SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEAEAARSASKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
>gi|225903367|ref|NP_001139512.1| glycine receptor subunit alpha-1 isoform 1 precursor [Homo sapiens]
gi|114603001|ref|XP_001169235.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pan
troglodytes]
gi|397517674|ref|XP_003829032.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Pan
paniscus]
gi|426350696|ref|XP_004042905.1| PREDICTED: glycine receptor subunit alpha-1 isoform 2 [Gorilla
gorilla gorilla]
gi|116242495|sp|P23415.2|GLRA1_HUMAN RecName: Full=Glycine receptor subunit alpha-1; AltName:
Full=Glycine receptor 48 kDa subunit; AltName:
Full=Glycine receptor strychnine-binding subunit; Flags:
Precursor
gi|109732076|gb|AAI14948.1| GLRA1 protein [Homo sapiens]
Length = 457
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|350594488|ref|XP_003483909.1| PREDICTED: glycine receptor subunit alpha-1-like isoform 2 [Sus
scrofa]
Length = 448
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +A SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEAEAARSASKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
>gi|440904075|gb|ELR54641.1| Glycine receptor subunit alpha-1, partial [Bos grunniens mutus]
Length = 443
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 145 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 204
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 205 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 264
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 265 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 304
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +A SA S S F D L YD P +G P V ++ + SI E
Sbjct: 10 KEAEAARSASKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 68
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 69 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 127
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 128 DNKLLRISRNGNVLYSIR 145
>gi|432098837|gb|ELK28332.1| Glycine receptor subunit alpha-1 [Myotis davidii]
Length = 460
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 170 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 229
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 230 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 289
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 290 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 329
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K DA SA S S F D L YD P +G P V ++ + SI E
Sbjct: 35 KEADAARSAPKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 93
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 94 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 152
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + + +LY ++
Sbjct: 153 DNKLLRISRSGNVLYSIR 170
>gi|119372310|ref|NP_000162.2| glycine receptor subunit alpha-1 isoform 2 precursor [Homo sapiens]
gi|114602999|ref|XP_527090.2| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Pan
troglodytes]
gi|397517672|ref|XP_003829031.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Pan
paniscus]
gi|426350694|ref|XP_004042904.1| PREDICTED: glycine receptor subunit alpha-1 isoform 1 [Gorilla
gorilla gorilla]
gi|49901658|gb|AAH74980.1| Glycine receptor, alpha 1 [Homo sapiens]
gi|119582061|gb|EAW61657.1| glycine receptor, alpha 1 (startle disease/hyperekplexia, stiff man
syndrome), isoform CRA_b [Homo sapiens]
gi|189053414|dbj|BAG35580.1| unnamed protein product [Homo sapiens]
Length = 449
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|426229950|ref|XP_004009046.1| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Ovis aries]
Length = 366
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 76 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 135
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 136 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 195
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 196 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 235
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 1 MDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTD 59
Query: 276 NHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 60 NKLLRISRNGNVLYSIR 76
>gi|119582060|gb|EAW61656.1| glycine receptor, alpha 1 (startle disease/hyperekplexia, stiff man
syndrome), isoform CRA_a [Homo sapiens]
Length = 422
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 124 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 183
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 184 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 243
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 244 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 283
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E +
Sbjct: 17 YDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNE-YPDDS 75
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 76 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 124
>gi|410039916|ref|XP_003950710.1| PREDICTED: glycine receptor subunit alpha-1 [Pan troglodytes]
gi|426350698|ref|XP_004042906.1| PREDICTED: glycine receptor subunit alpha-1 isoform 3 [Gorilla
gorilla gorilla]
gi|109732079|gb|AAI14968.1| GLRA1 protein [Homo sapiens]
Length = 366
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 76 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 135
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 136 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 195
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 196 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 235
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 1 MDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTD 59
Query: 276 NHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 60 NKLLRISRNGNVLYSIR 76
>gi|444723710|gb|ELW64349.1| Glycine receptor subunit alpha-1 [Tupaia chinensis]
Length = 449
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 2/144 (1%)
Query: 149 PPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGL 208
P ++ K +A SA S S F D L YD P +G P V ++ +
Sbjct: 18 PSLAASKEAEAARSAPKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSF 76
Query: 209 DSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVT 268
SI E +M Y +IF Q W D RL E + L+ L ++W+PD FF N K
Sbjct: 77 GSIAETTMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAH 135
Query: 269 FQTMTIPNHYVWLYKDKTILYMVK 292
F +T N + + ++ +LY ++
Sbjct: 136 FHEITTDNKLLRISRNGNVLYSIR 159
>gi|348557518|ref|XP_003464566.1| PREDICTED: glycine receptor subunit alpha-1 [Cavia porcellus]
Length = 467
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 177 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 236
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 237 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 296
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 297 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 336
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 2/141 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +A SA S S F D L YD P +G P V ++ + SI E
Sbjct: 42 KEAEAARSAPKSMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 100
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 101 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 159
Query: 275 PNHYVWLYKDKTILYMVKFVF 295
N + + ++ +LY ++
Sbjct: 160 DNKLLRISRNGNVLYSIRITL 180
>gi|345307955|ref|XP_001508794.2| PREDICTED: glycine receptor subunit alpha-1 [Ornithorhynchus
anatinus]
Length = 477
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 181 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 240
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 241 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 300
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 301 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 340
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 63 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 122
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 123 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 181
>gi|326928546|ref|XP_003210438.1| PREDICTED: glycine receptor subunit alpha-1-like [Meleagris
gallopavo]
Length = 474
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 184 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVADGLTLPQFILK 243
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 244 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 303
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 304 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 343
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E +
Sbjct: 77 YDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNE-YPDDS 135
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 136 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 184
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 50/125 (40%), Gaps = 36/125 (28%)
Query: 293 FVFMALMEYCLVNIV---------------------LGDSDLP------KPPEPAKQDKI 325
FVF AL+EY VN V G+ P +D I
Sbjct: 346 FVFSALLEYAAVNFVSRQHKELLRFRRKRRHHKEDEAGEGRFNFTAYGMGPACLQAKDGI 405
Query: 326 FELAAKENARLLTGQPMIPPNH--QQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCT 383
A N T P+ PP+ ++ ++ QRA+ ID+ SR+ FP+ F I N
Sbjct: 406 SVKGANNNN---TANPVPPPSRSPEEMRKLFIQRAK----KIDKISRIGFPMAFLIFNIF 458
Query: 384 YWIMF 388
YWI++
Sbjct: 459 YWIIY 463
>gi|351707767|gb|EHB10686.1| Glycine receptor subunit alpha-1 [Heterocephalus glaber]
Length = 464
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +A SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEAEAARSAPKSMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 47/137 (34%), Gaps = 45/137 (32%)
Query: 293 FVFMALMEYCLVNIV-------------------------------------LGDSDLPK 315
FVF AL+EY VN V LG+ PK
Sbjct: 321 FVFSALLEYAAVNFVSRQHKELLRFRRKRRHHKMSLCFLPPAGRNGNSRLSFLGNVISPK 380
Query: 316 PP---EPAKQDKIFELAAKENARLLTGQPMIPPNHQQAQRNL-AQRARTRAINIDRFSRV 371
PP +F+ P P + R L QRA+ ID+ SR+
Sbjct: 381 PPWAQTSVPSTPVFDPRKGAGNSTAANPPAAPSKSPEEMRKLFIQRAK----KIDKVSRI 436
Query: 372 FFPVLFAILNCTYWIMF 388
FP+ F I N YWI++
Sbjct: 437 GFPMAFLIFNMFYWIIY 453
>gi|260821583|ref|XP_002606112.1| hypothetical protein BRAFLDRAFT_88022 [Branchiostoma floridae]
gi|229291450|gb|EEN62122.1| hypothetical protein BRAFLDRAFT_88022 [Branchiostoma floridae]
Length = 446
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 112/159 (70%), Gaps = 1/159 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL+L+C MN +P D Q C +QMES TT++LI QW + P+ + EL + ++
Sbjct: 159 RLTLQLACEMNLEKFPLDYQRCDIQMESYGFTTENLILQWKEDNPVQLGNS-ELSKFNII 217
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
T DC Q Y+TG +TC+ V F L+R++GYYL YIP+ LIVI+SW+SFWI E+APA
Sbjct: 218 GVDTIDCPQNYTTGTYTCIAVQFHLQRKIGYYLIQLYIPSILIVIISWISFWITMESAPA 277
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
R LG+T++LT++TQ S+AS+P VSY++++D +M+ C
Sbjct: 278 RTALGITTVLTMTTQSTSSRASMPEVSYIRSIDIWMAVC 316
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE-NMTSE 242
YD P EG+P IV + V + SI+E +M Y+ +IF Q W D RL + N T
Sbjct: 53 YDHRIRPNFEGEPVIVTCEMFVKSIGSIEERTMDYSVNIFLRQKWNDPRLAFTKYNHTIA 112
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
++V LK +W+PD FF N K+ F ++T+ N ++ + + ILY
Sbjct: 113 ---VDVSLLKQLWQPDLFFVNEKSAKFHSVTVDNKFLRISPNGDILY 156
>gi|449474917|ref|XP_002195083.2| PREDICTED: glycine receptor subunit alpha-1 [Taeniopygia guttata]
Length = 450
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 160 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVADGLTLPQFILK 219
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 220 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 279
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 280 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 319
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E +
Sbjct: 53 YDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNE-YPDDS 111
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 112 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 160
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 50/125 (40%), Gaps = 36/125 (28%)
Query: 293 FVFMALMEYCLVNIV---------------------LGDSDLP------KPPEPAKQDKI 325
FVF AL+EY VN V G+ P +D I
Sbjct: 322 FVFSALLEYAAVNFVSRQHKELLRFRRKRRHHKEDEAGEGRFNFTAYGMGPACLQAKDGI 381
Query: 326 FELAAKENARLLTGQPMIPPNH--QQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCT 383
A N T P+ PP+ ++ ++ QRA+ ID+ SR+ FP+ F I N
Sbjct: 382 SVKGANNNN---TANPVPPPSRSPEEMRKLFIQRAK----KIDKISRIGFPMAFLIFNIF 434
Query: 384 YWIMF 388
YWI++
Sbjct: 435 YWIIY 439
>gi|402873157|ref|XP_003900452.1| PREDICTED: LOW QUALITY PROTEIN: glycine receptor subunit alpha-1
[Papio anubis]
Length = 481
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 114/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 191 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFXLK 250
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C + Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 251 EEKDLRYCXKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 310
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 311 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 350
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 73 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 132
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 133 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 191
>gi|449267128|gb|EMC78094.1| Glycine receptor subunit alpha-1, partial [Columba livia]
Length = 452
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 162 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVADGLTLPQFILK 221
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 222 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 281
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 282 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 321
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E +
Sbjct: 55 YDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNE-YPDDS 113
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 114 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 162
>gi|118097444|ref|XP_425210.2| PREDICTED: glycine receptor subunit alpha-1 [Gallus gallus]
Length = 570
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 280 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVADGLTLPQFILK 339
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 340 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 399
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 400 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 439
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E +
Sbjct: 173 YDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNE-YPDDS 231
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVF 295
L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 232 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITL 283
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 50/125 (40%), Gaps = 36/125 (28%)
Query: 293 FVFMALMEYCLVNIV---------------------LGDSDLP------KPPEPAKQDKI 325
FVF AL+EY VN V G+ P +D I
Sbjct: 442 FVFSALLEYAAVNFVSRQHKELLRFRRKRRHHKEDEAGEGRFNFTAYGMGPACLQAKDGI 501
Query: 326 FELAAKENARLLTGQPMIPPNH--QQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCT 383
A N T P+ PP+ ++ ++ QRA+ ID+ SR+ FP+ F I N
Sbjct: 502 SVKGANNNN---TANPVPPPSRSPEEMRKLFIQRAK----KIDKISRIGFPMAFLIFNIF 554
Query: 384 YWIMF 388
YWI++
Sbjct: 555 YWIIY 559
>gi|354474419|ref|XP_003499428.1| PREDICTED: glycine receptor subunit alpha-1-like [Cricetulus
griseus]
Length = 448
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 113/160 (70%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVGHGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +A P
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDATP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVHIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|344252733|gb|EGW08837.1| Glycine receptor subunit alpha-1 [Cricetulus griseus]
Length = 413
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 113/160 (70%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + LPQ L
Sbjct: 124 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVGHGLTLPQFILK 183
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +A P
Sbjct: 184 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDATP 243
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 244 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 283
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y IF Q W D R
Sbjct: 6 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVHIFLRQQWNDPR 65
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 66 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 124
>gi|313234096|emb|CBY19673.1| unnamed protein product [Oikopleura dioica]
Length = 282
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 110/159 (69%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL+ L+C M +P D Q C++Q+ES + +DL F W + + +IELPQ L
Sbjct: 78 RLSATLACHMRLERFPMDVQVCNIQIESFGYDMNDLYFTWSSLAAVELSNRIELPQFVLK 137
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+TA+C ++Y TGNFTC+E F+L R++GYY+ +IP+ LIVI+SWVSFWI +A PA
Sbjct: 138 GYRTANCMKIYDTGNFTCIEARFILARQMGYYMIECFIPSALIVILSWVSFWISIDAVPA 197
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LG+T++LT+++Q A +SLP VSY+KA+D +M C
Sbjct: 198 RVSLGITTVLTITSQRASISSSLPKVSYIKALDIWMVIC 236
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEV--DWLKNMWRPDSFFKNAKAVTFQTMT 273
M Y F W D RLR E + S +L V + L N+W+PD FF N K F ++T
Sbjct: 1 MDYRITFFLRMKWNDERLRFKE-LGSPVTMLTVSPEVLHNIWKPDIFFSNEKQANFHSIT 59
Query: 274 IPN 276
N
Sbjct: 60 AEN 62
>gi|313239586|emb|CBY14487.1| unnamed protein product [Oikopleura dioica]
Length = 481
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 113/159 (71%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+++ LSC M +P D Q+C +Q ES + +DL F+W + + + I LPQ +++
Sbjct: 140 RISIVLSCHMQLEKFPMDMQQCYIQAESFGYNMNDLAFKWSADKSIDMPGGIALPQFKIM 199
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+K ADC++ Y++G +TCL FVLKR +GYY+ YIP+ LIV++SWVSFWI EA PA
Sbjct: 200 GHKLADCTKSYTSGQYTCLRATFVLKREIGYYMIQIYIPSFLIVVLSWVSFWIAVEATPA 259
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LG+T++LT+++ +++ +SLP VSY+KA+D ++S C
Sbjct: 260 RVSLGITTVLTITSMRSEAGSSLPKVSYVKAIDIWLSLC 298
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 6/119 (5%)
Query: 179 EDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN 238
+D YD+ P P V + V +DSI E +M Y +F W D R +
Sbjct: 23 KDSTCYDRRIRPNAGITPKNVNVSLYVSSIDSITETTMDYRMTVFLRMRWIDPR-NFRKV 81
Query: 239 MTSEYRLLEVD-----WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+ + + ++ + +W PD FF N K F + N + + + +I ++
Sbjct: 82 FLAAFSICKLQPANFCFRHGIWIPDLFFFNEKKAAFHEIITQNRLLRISPNGSIYVSIR 140
>gi|391347839|ref|XP_003748161.1| PREDICTED: glycine receptor subunit alpha-2-like [Metaseiulus
occidentalis]
Length = 422
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 114/160 (71%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL L+ SC M+ YP D+Q CS+++ S S TTD+L +W PE P+ + E ++LPQ ++
Sbjct: 170 RLKLRFSCMMDLYRYPMDSQVCSIELASFSKTTDELQLRWAPENPVKLFENMKLPQFEIE 229
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ C + + G ++CL+ F L+R LGY++ +Y+PT LIV++SWVSFW+ +A PA
Sbjct: 230 NVTVSLCKEKFHIGEYSCLKAEFYLQRSLGYHMVQSYLPTILIVVISWVSFWLDVDAIPA 289
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACT 165
RVTLGVT+LLT+S++ A Q++LPPVSY+KA+D +M CT
Sbjct: 290 RVTLGVTTLLTISSKGAGIQSNLPPVSYVKAMDVWMGTCT 329
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 150 PVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKE-GQPTIVYFHVTVMGL 208
PV+Y K ++ S+ ++++ D L E K YD+ P G+PTIV + +
Sbjct: 28 PVNYAKTHSSYDSSQNKLNSTIKDLDALDELLKNYDRRALPTSHLGEPTIVTSEIFIRSF 87
Query: 209 DSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVT 268
SID ++M Y D++ Q W+D R + + L + ++ +W+P+ FF NAK
Sbjct: 88 GSIDPSNMDYEVDLYLRQGWQDDRFK-KNTFSRALDLNDPKLVQRIWKPEVFFANAKHAE 146
Query: 269 FQTMTIPNHYVWLYKDKTILYM--VKFVFMALME 300
FQ +T+PN V + ILYM +K F +M+
Sbjct: 147 FQFVTVPNVLVRIKPSGEILYMLRLKLRFSCMMD 180
>gi|313244033|emb|CBY14902.1| unnamed protein product [Oikopleura dioica]
Length = 439
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 110/159 (69%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL+ L+C M +P D Q C++Q+ES + +DL F W + + +IELPQ L
Sbjct: 233 RLSATLACHMRLERFPMDVQVCNIQIESFGYDMNDLYFTWSSLAAVELSNRIELPQFVLK 292
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+TA+C ++Y TGNFTC+E F+L R++GYY+ +IP+ LIVI+SWVSFWI +A PA
Sbjct: 293 GYRTANCMKIYDTGNFTCIEARFILARQMGYYMIECFIPSALIVILSWVSFWISIDAVPA 352
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LG+T++LT+++Q A +SLP VSY+KA+D +M C
Sbjct: 353 RVSLGITTVLTITSQRASISSSLPKVSYIKALDIWMVIC 391
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 213 ENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEV--DWLKNMWRPDSFFKNAKAVTFQ 270
+ SM Y F W D RLR E + S +L V + L N+W+PD FF N K F
Sbjct: 153 KTSMDYRITFFLRMKWNDERLRFKE-LGSPVTMLTVSPEVLHNIWKPDIFFSNEKQANFH 211
Query: 271 TMTIPN 276
++T N
Sbjct: 212 SITAEN 217
>gi|410989076|ref|XP_004000793.1| PREDICTED: glycine receptor subunit alpha-4 [Felis catus]
Length = 457
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV L +T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLDITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K +F +T N + ++K+ +LY ++
Sbjct: 107 LAYGE-YPDDSLDLDPSMLDSIWKPDLFFANEKGASFHEVTTDNKLLRIFKNGNVLYSIR 165
Query: 293 FVFM 296
+
Sbjct: 166 LTLI 169
>gi|313235370|emb|CBY19715.1| unnamed protein product [Oikopleura dioica]
Length = 487
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 113/159 (71%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+++ LSC M +P D Q+C +Q ES + +DL F+W + + + I LPQ +++
Sbjct: 146 RISIVLSCHMQLEKFPMDMQQCYIQAESFGYNMNDLAFKWSADKSIDMPGGIALPQFKIM 205
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+K ADC++ Y++G +TCL FVLKR +GYY+ YIP+ LIV++SWVSFWI EA PA
Sbjct: 206 GHKLADCTKSYTSGQYTCLRATFVLKREIGYYMIQIYIPSFLIVVLSWVSFWIAVEATPA 265
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LG+T++LT+++ +++ +SLP VSY+KA+D ++S C
Sbjct: 266 RVSLGITTVLTITSMRSEAGSSLPKVSYVKAIDIWLSLC 304
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 6/119 (5%)
Query: 179 EDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN 238
+D YD+ P PT V + V +DSI E +M Y +F W D R +
Sbjct: 29 KDSTCYDRRIRPNAGITPTNVNVSLYVSSIDSITETTMDYRMTVFLRMRWIDPR-NFRKV 87
Query: 239 MTSEYRLLEVD-----WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+ + + ++ +W PD FF N K F + N + + + +I ++
Sbjct: 88 FLAAFSICKLQPANFCLRHGIWIPDLFFFNEKKAAFHEIITQNRLLRISPNGSIYVSIR 146
>gi|119625138|gb|EAX04733.1| glycine receptor, alpha 3, isoform CRA_c [Homo sapiens]
Length = 292
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 110/151 (72%), Gaps = 1/151 (0%)
Query: 15 MNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLVKNKTAD-CS 73
M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L + K C+
Sbjct: 1 MDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCT 60
Query: 74 QVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTS 133
+ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAPARV LG+T+
Sbjct: 61 KHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITT 120
Query: 134 LLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 121 VLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 151
>gi|382928883|gb|AFG29907.1| glutamate-gated chloride channel 2, partial [Tetranychus urticae]
Length = 440
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 107/159 (67%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C M+ YP D QEC ++M S +TTDDL F+W P+ + + LP+ L
Sbjct: 168 RISLLLACPMDLKYYPLDEQECFMRMASYGYTTDDLEFRWKDGDPVQITSNLHLPRFALQ 227
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K KTA C+ +TG ++CL+V KR YYL Y+P C++VI+SWVSFW+ P A PA
Sbjct: 228 KYKTAYCTSRTNTGEYSCLKVYLDFKREFSYYLIQIYMPCCMLVIVSWVSFWLDPNAIPA 287
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY+KA+D + C
Sbjct: 288 RVSLGVTTLLTMATQISGINASLPPVSYIKAIDVWTGVC 326
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 196 PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMW 255
P +V ++ + + I + M Y+ I F + W+D RL+ +N + + L + +W
Sbjct: 73 PCVVMVNIFLRSISKISDLDMEYSVQITFREEWRDERLQYNDN-NEQIKFLTLTDPNRIW 131
Query: 256 RPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
+PD FF N K F T+ +PN + +Y D ++LY ++ +
Sbjct: 132 KPDLFFSNEKEGHFHTIIMPNVLLRIYPDGSVLYSIRISLL 172
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 291 VKFVFMALMEYCLVNIVLGDSDLPKPPEP-------AKQDKIFELAAKENARLLTGQPMI 343
+ FVF AL+E+ LVN SD + + D+ + + E + L +P++
Sbjct: 327 LAFVFGALLEFALVNYA-SRSDAHRHAREFNGLRYQRRWDRDGNVISDETSYAL--RPLV 383
Query: 344 PPNHQQAQRNLAQR----ARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+ + +N+ R TR+ ID SR+FFP++F + N YW+ +
Sbjct: 384 IKGSEYSNKNIFSRWWSKFPTRSKRIDVVSRIFFPLMFCLFNLVYWVTY 432
>gi|443730618|gb|ELU16042.1| hypothetical protein CAPTEDRAFT_114809, partial [Capitella teleta]
Length = 316
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 112/161 (69%), Gaps = 1/161 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
++T LSC M YP DTQ+C + ES +T + +I++W P P+ ++ +ELPQ +LV
Sbjct: 99 KITATLSCPMRLHKYPLDTQDCPMMFESFGYTMEHIIYKWLPS-PVQREKGLELPQFRLV 157
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ DCSQ Y+TG + CLEV F+LKR +GYY+ Y+PT LIVI+SWV+FWI +A PA
Sbjct: 158 DHSLNDCSQNYTTGAYPCLEVRFILKRDIGYYMIQLYVPTVLIVILSWVAFWISIDAIPA 217
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVT+G+ ++LT++TQ ++ LP VSY+KA+D +M C +
Sbjct: 218 RVTIGLLTVLTMTTQSTGARTQLPRVSYIKAIDVWMVVCLI 258
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 196 PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---NMTSEYRLLEVDWLK 252
PTIV + + +I E +M ++ +++ Q W+D+RL+ + N + +L + W
Sbjct: 1 PTIVQLGIYINSFYAISEQTMDFSLNLYLRQQWRDNRLQYDKKDNNGQDKLKLGDGMW-D 59
Query: 253 NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+W PD FF+N K F +T PN + L+ + T+ Y+ K
Sbjct: 60 RLWTPDVFFRNEKKAAFHVVTTPNRLLNLHSNGTVWYVSK 99
>gi|382928889|gb|AFG29910.1| glutamate-gated chloride channel 5, partial [Tetranychus urticae]
Length = 444
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 109/159 (68%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C M+ YP D Q C++ M S +TT+DLIFQW P+ V + + LP+ L
Sbjct: 124 RISLVLACPMDLKYYPLDLQTCTISMASYGYTTEDLIFQWKEGDPVQVTKNLHLPRFTLQ 183
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ +T C+ +TG+++C++V + KR YYL H YIP ++VI+SWVSFW+ P A PA
Sbjct: 184 RFQTQYCTSATNTGSYSCIKVNLIFKREFSYYLIHIYIPCIMLVIVSWVSFWLDPNAIPA 243
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY+KAVD + C
Sbjct: 244 RVSLGVTTLLTMATQISGINASLPPVSYIKAVDVWTECC 282
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 192 KEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWL 251
K+G P V ++ + + I + M Y+A I F + W+D RL +M + R L +
Sbjct: 26 KDG-PCYVNVNILIRSISEISDLDMEYSAQITFREQWRDDRLAY-NDMVGQIRYLTLTDP 83
Query: 252 KNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+W+PD FF+N K F + +PN + +Y + +LY ++
Sbjct: 84 NRIWKPDLFFRNEKEGHFHDIIMPNVLLRIYPNGEVLYSIR 124
>gi|427793163|gb|JAA62033.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 302
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 113/161 (70%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL L SC M+ YP D+Q C++++ S S TTD+L W P+ + E ++LPQ ++
Sbjct: 33 RLKLTFSCMMDLYRYPLDSQVCTIELASFSKTTDELQLHWSKAAPVILYENMKLPQFEIQ 92
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
T+ C++ + G ++CL+ F L+R +GY+L +Y+PT LIV++SWVSFW+ EA PA
Sbjct: 93 NVNTSLCNETFHIGEYSCLKAEFNLQRSIGYHLVQSYLPTILIVVISWVSFWLDVEAIPA 152
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
R+TLGVT+LLT+S++ A Q +LPPVSY+KA+D +M ACT+
Sbjct: 153 RITLGVTTLLTISSKGAGIQGNLPPVSYVKAIDVWMGACTM 193
>gi|357629877|gb|EHJ78383.1| glutamate-gated chloride channel [Danaus plexippus]
Length = 422
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 135 RISLTLSCPMNLKLYPLDKQTCSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 194
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 195 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 254
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 255 RVSLGVTTLLTMATQSSGINASLPPVSYTKAIDVWTGVC 293
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 181 PKLYD-KMRPPKKEG---QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
P YD ++RP G PT+V ++ + + ID+ M Y+ + F + W D RL+
Sbjct: 21 PGRYDARIRPSGINGTGDAPTLVRVNLYLRSISKIDDYKMEYSVQLTFREQWLDERLKF- 79
Query: 237 ENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
N+ + L + +W PD FF N K F + +PN Y+ ++ + +LY ++ +
Sbjct: 80 NNLGDRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGNVLYSIR---I 136
Query: 297 ALMEYCLVNIVL 308
+L C +N+ L
Sbjct: 137 SLTLSCPMNLKL 148
>gi|397310811|gb|AFO38419.1| glutamate-gated chloride channel [Plutella xylostella]
Length = 448
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 159 RISLTLSCPMNLKLYPLDKQTCSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 218
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 219 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 278
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 279 RVSLGVTTLLTMATQSSGINASLPPVSYTKAIDVWTGVC 317
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 181 PKLYD-KMRPPKKEG---QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
P YD ++RP G PT+V ++ + + ID+ M Y+ + F + W D RL+
Sbjct: 45 PGRYDARIRPSGINGTGDAPTLVRVNLYLRSISKIDDYKMEYSVQLTFREQWLDERLKF- 103
Query: 237 ENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
N+ + L + +W PD FF N K F + +PN Y+ ++ + +LY ++ +
Sbjct: 104 NNLGGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGNVLYSIR---I 160
Query: 297 ALMEYCLVNIVL 308
+L C +N+ L
Sbjct: 161 SLTLSCPMNLKL 172
>gi|247720066|gb|ACT09139.1| glutamate-gated chloride channel [Plutella xylostella]
Length = 447
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 158 RISLTLSCPMNLKLYPLDKQTCSLRMASCGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 217
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 218 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 277
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 278 RVSLGVTTLLTMATQSSGINASLPPVSYTKAIDVWTGVC 316
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 181 PKLYD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE 237
P YD ++RP G P +V ++ V + ID+ +M Y+ + F + W D RL+
Sbjct: 45 PGRYDARIRPSGINGTDGPAVVSVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLKF-N 103
Query: 238 NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
N+ + L + +W PD FF N K F + +PN Y+ ++ + +LY ++ ++
Sbjct: 104 NLGGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGNVLYSIR---IS 160
Query: 298 LMEYCLVNIVL 308
L C +N+ L
Sbjct: 161 LTLSCPMNLKL 171
>gi|269785257|ref|NP_001161556.1| glycine receptor alpha 1 subunit-like protein [Saccoglossus
kowalevskii]
gi|268054099|gb|ACY92536.1| glycine receptor alpha 1 subunit-like protein [Saccoglossus
kowalevskii]
Length = 402
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 109/168 (64%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL L+C M F +P D Q C +QMES +TT +L FQW P+ P+ D EL Q +
Sbjct: 130 RLTLTLACPMKFGKFPMDKQTCHMQMESYGYTTSELEFQWKPDSPITNDTAFELQQFTVT 189
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
++ C + Y TG FTC+ V+FVL R LGYY +IP+ ++V++SWVSFWI P A+PA
Sbjct: 190 SHEIGRCDKSYYTGEFTCIMVMFVLGRELGYYWLIIFIPSFMLVLLSWVSFWINPFASPA 249
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTF 173
RV+L +TS+LT++TQ +LP VSY A+D +M+ C + T+ F
Sbjct: 250 RVSLCITSVLTITTQAIGVHETLPKVSYATAIDVWMALCLIFVTASLF 297
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD+ P +G PT++Y + + DS+ E +M + + W D RL N+TS++
Sbjct: 24 YDRRLRPNFDGPPTVIYIDIHISRFDSVHEMTMDFGMTVLLRMRWNDPRLSF--NLTSQH 81
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+ +W PD +F N K F +T N + + + +L+ V+
Sbjct: 82 IPPSSFMVGKIWIPDLYFANEKTAYFHDVTRDNILLRFHPNGDVLFSVR 130
>gi|391328876|ref|XP_003738909.1| PREDICTED: glycine receptor subunit alpha-2-like [Metaseiulus
occidentalis]
Length = 369
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 112/161 (69%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL L SC M+ YP D Q C++++ S S TTD+L+ W P+ + E ++LPQ ++
Sbjct: 103 RLKLTFSCMMDLYRYPLDVQTCTIELASFSKTTDELVLHWSERNPVILFENLKLPQFEIE 162
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
T+ C++ + G ++CL+ F L+R +GY+L +Y+PT LIV++SWVSFW+ EA PA
Sbjct: 163 NVSTSLCNETFYLGEYSCLKAEFHLQRSMGYHLVQSYLPTVLIVVISWVSFWLDVEAIPA 222
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
R+TLGVT+LLT+S++ Q++LPPVSY+KA+D +M CT+
Sbjct: 223 RITLGVTTLLTISSKGVGIQSNLPPVSYVKAIDVWMGVCTM 263
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
++ Y D++ Q W D RL N+++ L + ++ +W+P+ FF NAK FQ +T+
Sbjct: 27 TIDYEVDLYLRQRWFDGRLA-NVNISAPLDLNDPKLVQKIWKPEVFFANAKHAEFQFVTV 85
Query: 275 PNHYVWLYKDKTILYM--VKFVFMALME 300
PN V L ILYM +K F +M+
Sbjct: 86 PNVLVRLSPHGMILYMLRLKLTFSCMMD 113
>gi|383854929|ref|XP_003702972.1| PREDICTED: glutamate-gated chloride channel-like isoform 1
[Megachile rotundata]
Length = 452
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 158 RISLTLSCPMNLKLYPLDRQTCSLRMASYGWTTDDLVFIWKEGDPVQVVKNLHLPRFTLE 217
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 218 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPA 277
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 278 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 316
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 181 PKLYD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE 237
P YD ++RP + P +V ++ V + ID+ +M Y+ + F + W D RLR +
Sbjct: 45 PGRYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRF-D 103
Query: 238 NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ + L + +W PD FF N K F + +PN Y+ ++ ++LY ++ ++
Sbjct: 104 DFGGRLKYLTLTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPHGSVLYSIR---IS 160
Query: 298 LMEYCLVNIVL 308
L C +N+ L
Sbjct: 161 LTLSCPMNLKL 171
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 29/122 (23%)
Query: 293 FVFMALMEYCLVNIV----LGDSDLPK--PPEPAKQDKIFELAAKE----NARLLTGQPM 342
FVF AL+E+ LVN + ++ K PP +Q + ++ + N+ +P+
Sbjct: 319 FVFGALLEFALVNYASRSDMHSDNMEKKYPPSETEQSSSIDPSSDQIEPDNSSNFAMKPL 378
Query: 343 I-------------------PPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCT 383
+ P + R+ + TR+ ID SR+FFP++FAI N
Sbjct: 379 VRQPEDTMSVDRMQHCELHMQPRKKNCCRSWLSKFPTRSKRIDVISRIFFPIVFAIFNLA 438
Query: 384 YW 385
YW
Sbjct: 439 YW 440
>gi|383854931|ref|XP_003702973.1| PREDICTED: glutamate-gated chloride channel-like isoform 2
[Megachile rotundata]
Length = 452
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 158 RISLTLSCPMNLKLYPLDRQTCSLRMASYGWTTDDLVFIWKEGDPVQVVKNLHLPRFTLE 217
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 218 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPA 277
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 278 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 316
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 181 PKLYD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE 237
P YD ++RP + P IV ++ V + +I + M Y+ + F + W D RLR +
Sbjct: 45 PGRYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRF-D 103
Query: 238 NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ + L + +W PD FF N K F + +PN Y+ ++ ++LY ++ ++
Sbjct: 104 DFGGRLKYLTLTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPHGSVLYSIR---IS 160
Query: 298 LMEYCLVNIVL 308
L C +N+ L
Sbjct: 161 LTLSCPMNLKL 171
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 29/122 (23%)
Query: 293 FVFMALMEYCLVNIV----LGDSDLPK--PPEPAKQDKIFELAAKE----NARLLTGQPM 342
FVF AL+E+ LVN + ++ K PP +Q + ++ + N+ +P+
Sbjct: 319 FVFGALLEFALVNYASRSDMHSDNMEKKYPPSETEQSSSIDPSSDQIEPDNSSNFAMKPL 378
Query: 343 I-------------------PPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCT 383
+ P + R+ + TR+ ID SR+FFP++FAI N
Sbjct: 379 VRQPEDTMSVDRMQHCELHMQPRKKNCCRSWLSKFPTRSKRIDVISRIFFPIVFAIFNLA 438
Query: 384 YW 385
YW
Sbjct: 439 YW 440
>gi|241714534|ref|XP_002413510.1| DrosGluCl, putative [Ixodes scapularis]
gi|215507324|gb|EEC16818.1| DrosGluCl, putative [Ixodes scapularis]
Length = 448
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 107/160 (66%)
Query: 5 YRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQL 64
+R++L LSC MN YP D Q CS+ M S +TT+DL+F W P+ V + + LP+ L
Sbjct: 160 FRISLVLSCPMNLKFYPLDKQICSILMVSYGYTTEDLVFLWKEGDPVQVTKNLHLPRFTL 219
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ +T C+ +TG+++CL V V KR YYL YIP C++VI+SWVSFW+ P + P
Sbjct: 220 ERFQTDYCTSRTNTGDYSCLRVDLVFKREFSYYLIQIYIPCCMLVIVSWVSFWLDPTSIP 279
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 280 ARVSLGVTTLLTMATQISGINASLPPVSYTKAIDVWTGVC 319
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 190 PKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVD 249
P +G P +V ++ + + ID+ +M Y + F + W+D RL+ +++ + R L +
Sbjct: 54 PDADG-PALVRVNIYIRSISRIDDVTMEYTVQMTFREQWRDERLQY-DDLGGQVRYLTLT 111
Query: 250 WLKNMWRPDSFFKNAKAVTFQTMTIPN 276
+W+PD FF N K F + +PN
Sbjct: 112 EPDKLWKPDLFFSNEKEGHFHNIIMPN 138
>gi|350422018|ref|XP_003493030.1| PREDICTED: glutamate-gated chloride channel-like isoform 2 [Bombus
impatiens]
Length = 452
Score = 167 bits (423), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 158 RISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 217
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 218 KFYTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPA 277
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 278 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDIWTGVC 316
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Query: 173 FNDILPEDPKLYD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
+DIL P YD ++RP + G P IV ++ V + +I + M Y+ + F + W
Sbjct: 39 LDDIL--GPGRYDARIRPSGENGTDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWL 96
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
D RLR + + L + +W PD FF N K F + +PN Y+ ++ + +LY
Sbjct: 97 DERLRF-SDFKGRLKYLTLTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGFVLY 155
Query: 290 MVKFVFMALMEYCLVNIVL 308
++ ++L C +N+ L
Sbjct: 156 SIR---ISLTLSCPMNLKL 171
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 29/122 (23%)
Query: 293 FVFMALMEYCLVNIV----LGDSDLPK--PPEPAKQDKIFELAAKE----NARLLTGQPM 342
FVF AL+E+ LVN + ++ K PP +Q +L + + N+ +P+
Sbjct: 319 FVFGALLEFALVNYASRSDMHSDNIEKKYPPSETEQSTSMDLPSDQVEPDNSSNFAMKPL 378
Query: 343 I-------------------PPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCT 383
+ P + R+ + TR+ ID SR+FFP++FA N
Sbjct: 379 VRQPEDTMSMDRMEHCELHMQPRKKNCCRSWLSKFPTRSKRIDVISRIFFPIVFAFFNLA 438
Query: 384 YW 385
YW
Sbjct: 439 YW 440
>gi|350422015|ref|XP_003493029.1| PREDICTED: glutamate-gated chloride channel-like isoform 1 [Bombus
impatiens]
Length = 452
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 158 RISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 217
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 218 KFYTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPA 277
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 278 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDIWTGVC 316
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 173 FNDILPEDPKLYD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
+DIL P YD ++RP + G P +V ++ V + ID+ +M Y+ + F + W
Sbjct: 39 LDDIL--GPGRYDARIRPSGENGTDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWL 96
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
D RLR + + L + +W PD FF N K F + +PN Y+ ++ + +LY
Sbjct: 97 DERLRF-SDFKGRLKYLTLTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGFVLY 155
Query: 290 MVKFVFMALMEYCLVNIVL 308
++ ++L C +N+ L
Sbjct: 156 SIR---ISLTLSCPMNLKL 171
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 29/122 (23%)
Query: 293 FVFMALMEYCLVNIV----LGDSDLPK--PPEPAKQDKIFELAAKE----NARLLTGQPM 342
FVF AL+E+ LVN + ++ K PP +Q +L + + N+ +P+
Sbjct: 319 FVFGALLEFALVNYASRSDMHSDNIEKKYPPSETEQSTSMDLPSDQVEPDNSSNFAMKPL 378
Query: 343 I-------------------PPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCT 383
+ P + R+ + TR+ ID SR+FFP++FA N
Sbjct: 379 VRQPEDTMSMDRMEHCELHMQPRKKNCCRSWLSKFPTRSKRIDVISRIFFPIVFAFFNLA 438
Query: 384 YW 385
YW
Sbjct: 439 YW 440
>gi|340724890|ref|XP_003400811.1| PREDICTED: glutamate-gated chloride channel-like [Bombus
terrestris]
Length = 452
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 158 RISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 217
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 218 KFYTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPA 277
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 278 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDIWTGVC 316
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Query: 173 FNDILPEDPKLYD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
+DIL P YD ++RP + G P IV ++ V + +I + M Y+ + F + W
Sbjct: 39 LDDIL--GPGRYDARIRPSGENGTDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWL 96
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
D RLR + + L + +W PD FF N K F + +PN Y+ ++ + +LY
Sbjct: 97 DERLRF-SDFKGRLKYLTLTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGFVLY 155
Query: 290 MVKFVFMALMEYCLVNIVL 308
++ ++L C +N+ L
Sbjct: 156 SIR---ISLTLSCPMNLKL 171
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 29/122 (23%)
Query: 293 FVFMALMEYCLVNIV----LGDSDLPK--PPEPAKQDKIFELAAKE----NARLLTGQPM 342
FVF AL+E+ LVN + ++ K PP +Q +L + + N+ +P+
Sbjct: 319 FVFGALLEFALVNYASRSDMHSDNIEKKYPPSETEQSTSMDLPSDQVEPDNSSNFAMKPL 378
Query: 343 I-------------------PPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCT 383
+ P + R+ + TR+ ID SR+FFP++FA N T
Sbjct: 379 VRQPEDTMSMDRMQHCELHMQPRKKNCCRSWLSKFPTRSKRIDVISRIFFPIVFAFFNLT 438
Query: 384 YW 385
YW
Sbjct: 439 YW 440
>gi|313216838|emb|CBY38071.1| unnamed protein product [Oikopleura dioica]
Length = 429
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 108/161 (67%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L C M+F ++P D Q C +QMES ++ D L F W + + +++ I LPQ ++
Sbjct: 152 RISLTLGCFMDFHLFPMDIQTCPIQMESFGYSMDTLQFNWQEKGAIQLNDNIVLPQFKIK 211
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K DC++VYS+G FTC E F+++R+LGYY Y+PT L+V +SW+SFWI AAPA
Sbjct: 212 GFKLEDCTKVYSSGKFTCKEGQFIMQRQLGYYFVQMYVPTVLVVWLSWISFWIDINAAPA 271
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
R +LGVT++LT++ Q S +P +SY+K +D +M+ C +
Sbjct: 272 RTSLGVTTVLTITQQAQSSANEVPKLSYIKGIDYWMTTCMI 312
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Query: 175 DILPEDPKLYDKMRPPKKEGQ-PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL 233
+ L E YD+ P + PT + ++ V +DSI+ ++M Y ++F W D RL
Sbjct: 33 EFLDELLGSYDRFTHPNYYSKLPTNISINLFVNSIDSIESSTMDYKMNVFLRMKWIDRRL 92
Query: 234 RLPENMTSEYRL-LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
R + + L + + +W PD F N K F T+T N + L ++ + ++
Sbjct: 93 RYSQQDVPDPVLNVHPSMYEKLWVPDLIFSNEKVGNFHTLTTDNRLLKLSRNGEVYTSIR 152
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPP 317
++L C ++ L D+ P
Sbjct: 153 ---ISLTLGCFMDFHLFPMDIQTCP 174
>gi|332029667|gb|EGI69556.1| Glutamate-gated chloride channel [Acromyrmex echinatior]
Length = 398
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 104 RISLTLSCPMNLKLYPLDRQTCSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 163
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 164 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPA 223
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 224 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 262
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 49/124 (39%), Gaps = 29/124 (23%)
Query: 291 VKFVFMALMEYCLVNIVLGD---SDLPKPPEPAKQ-------DKIFELAAKENARLLTGQ 340
+ FVF AL+E+ LVN SD K P + D EL + + +
Sbjct: 263 LTFVFGALLEFALVNYASRSDMHSDNIKKQFPQNEMEHSSSIDPSSELLEPDGSANFAMK 322
Query: 341 PMI-------------------PPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILN 381
P++ P + R+ + TR+ ID SR+FFP++FA N
Sbjct: 323 PLVRHPEDSMSMDKLQQCEIHMQPRKKNCCRSWLSKFPTRSKRIDVISRIFFPIVFAFFN 382
Query: 382 CTYW 385
YW
Sbjct: 383 LAYW 386
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
M+ + + L + +W PD FF N K F + +PN Y+ ++ ++LY ++ ++L
Sbjct: 51 MSRKLKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPHGSVLYSIR---ISL 107
Query: 299 MEYCLVNIVL 308
C +N+ L
Sbjct: 108 TLSCPMNLKL 117
>gi|313224796|emb|CBY20588.1| unnamed protein product [Oikopleura dioica]
Length = 432
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 108/161 (67%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L C M+F ++P D Q C +QMES ++ D L F W + + +++ I LPQ ++
Sbjct: 133 RISLTLGCFMDFHLFPMDIQTCPIQMESFGYSMDTLQFNWQEKGAIQLNDNIVLPQFKIK 192
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K DC++VYS+G FTC E F+++R+LGYY Y+PT L+V +SW+SFWI AAPA
Sbjct: 193 GFKLEDCTKVYSSGKFTCKEGQFIMQRQLGYYFVQMYVPTVLVVWLSWISFWIDINAAPA 252
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
R +LGVT++LT++ Q S +P +SY+K +D +M+ C +
Sbjct: 253 RTSLGVTTVLTITQQAQSSANEVPKLSYIKGIDYWMTTCMI 293
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 5/136 (3%)
Query: 184 YDKMRPPKKEGQ-PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD+ P + PT + ++ V +DSI+ ++M Y ++F W D RLR + +
Sbjct: 23 YDRFTHPNYYSKLPTNISINLFVNSIDSIESSTMDYKMNVFLRMKWIDRRLRYSQQDVPD 82
Query: 243 YRL-LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEY 301
L + + +W PD F N K F T+T N + L ++ + ++ ++L
Sbjct: 83 PVLNVHPSMYEKLWVPDLIFSNEKVGNFHTLTTDNRLLKLSRNGEVYTSIR---ISLTLG 139
Query: 302 CLVNIVLGDSDLPKPP 317
C ++ L D+ P
Sbjct: 140 CFMDFHLFPMDIQTCP 155
>gi|328701218|ref|XP_001943413.2| PREDICTED: glutamate-gated chloride channel-like [Acyrthosiphon
pisum]
Length = 454
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 177 RISLTLSCPMNLKLYPLDRQTCSLRMVSYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 236
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 237 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPA 296
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 297 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 335
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 181 PKLYD-KMRPPKKEG---QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
P YD ++RP G P IVY ++ V + ID+ M Y+ + F + W D RL+
Sbjct: 63 PGSYDARIRPSGVNGTGDSPCIVYVNMLVRSISRIDDYKMEYSVQLTFREQWMDERLKF- 121
Query: 237 ENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
+ + + L + +W PD FF N K F + +PN Y+ ++ + +LY ++ +
Sbjct: 122 NDYNGKMKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGLVLYSIR---I 178
Query: 297 ALMEYCLVNIVL 308
+L C +N+ L
Sbjct: 179 SLTLSCPMNLKL 190
>gi|397310813|gb|AFO38420.1| glutamate-gated chloride channel [Plutella xylostella]
Length = 448
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 159 RISLTLSCPMNLKLYPLDKQTCSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 218
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 219 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 278
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY K +D + C
Sbjct: 279 RVSLGVTTLLTMATQSSGINASLPPVSYTKVIDVWTGVC 317
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 181 PKLYD-KMRPPKKEG---QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
P YD ++RP G PT+V ++ + + ID+ M Y+ + F + W D RL+
Sbjct: 45 PGRYDARIRPSGINGTGDAPTLVRVNLYLRSISKIDDYKMEYSVQLTFREQWLDERLKF- 103
Query: 237 ENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
N+ + L + +W PD FF N K F + +PN Y+ ++ + +LY ++ +
Sbjct: 104 NNLGGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGNVLYSIR---I 160
Query: 297 ALMEYCLVNIVL 308
+L C +N+ L
Sbjct: 161 SLTLSCPMNLKL 172
>gi|166851816|ref|NP_001107775.1| glutamate-gated chloride channel isoform a precursor [Tribolium
castaneum]
gi|156447613|gb|ABU63599.1| glutamate-gated chloride channel splice variant 3a [Tribolium
castaneum]
gi|270015140|gb|EFA11588.1| GluClalpha [Tribolium castaneum]
Length = 447
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 153 RISLTLSCPMNLKLYPLDRQICSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 212
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 213 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 272
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 273 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 311
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
Query: 183 LYD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENM 239
+YD ++RP G P IV ++ V + +I + M Y+ + F + W D RL+ +
Sbjct: 42 MYDARIRPSGVNGTDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLKF-NDF 100
Query: 240 TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALM 299
+ L + +W PD FF N K F + +PN Y+ ++ ++LY ++ ++L
Sbjct: 101 GGRLKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPYGSVLYSIR---ISLT 157
Query: 300 EYCLVNIVL 308
C +N+ L
Sbjct: 158 LSCPMNLKL 166
>gi|382928881|gb|AFG29906.1| glutamate-gated chloride channel 1, partial [Tetranychus urticae]
Length = 432
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 106/161 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L C M+ +P D Q CS+ M S +TT+DL+F W P+ + + + LP+ L+
Sbjct: 152 RISLNLFCPMDLKYFPLDIQNCSISMASYGYTTEDLVFLWKAGDPVQITKSLHLPRFTLM 211
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T+ C+ +TG ++CL+V V KR YYLF Y+P C++VI+SWVSFWI P +A A
Sbjct: 212 KYLTSYCTSKTNTGEYSCLKVELVFKREFSYYLFLIYVPCCMLVIVSWVSFWIDPNSAAA 271
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV LGVTSLLT+S Q + ASLPPVSY KAVD + C +
Sbjct: 272 RVLLGVTSLLTMSRQISGINASLPPVSYTKAVDIWTDCCLI 312
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 180 DPKLYDKMRPPKKEG-QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN 238
DP++ +G +P IV ++ + + ID+ +M YA I F + W+D RL ++
Sbjct: 40 DPRIRPSGANATVDGDEPCIVKVNIYIRSISRIDDVTMEYATQITFREEWRDSRLVF-DD 98
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
M + L + + +W+PD FF N K F + +PN + ++ + ILY ++ ++L
Sbjct: 99 MGGRIKFLVLTDPEKLWKPDLFFSNEKNGHFHDIIMPNVLLRIFPNGDILYSIR---ISL 155
Query: 299 MEYC 302
+C
Sbjct: 156 NLFC 159
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 22/118 (18%)
Query: 293 FVFMALMEYCLVNIV------LGDSDLPKPPEP---------AKQDKIFELAAKEN---- 333
FVF AL+E+ +VN V D + P+ +D E + E+
Sbjct: 313 FVFGALIEFAIVNYVSRTDTIKADKHRRRRPQGIVGARRKFDTAKDSGIESSDVEDGPIG 372
Query: 334 -ARLL--TGQPMIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
A+ L T P P ++ N R TR+ ID SR+ FP LFAI N YW +
Sbjct: 373 YAKALGSTKLPRKKPPNRGIFSNWLSRFHTRSKKIDVTSRIVFPFLFAIFNAFYWTKY 430
>gi|158631173|ref|NP_001103244.1| glutamate-gated chloride channel isoform c precursor [Tribolium
castaneum]
gi|156447617|gb|ABU63601.1| glutamate-gated chloride channel splice variant 3c [Tribolium
castaneum]
Length = 447
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 153 RISLTLSCPMNLKLYPLDRQICSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 212
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 213 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 272
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 273 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 311
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
Query: 183 LYD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENM 239
+YD ++RP G PT+V + + + ID+ M Y+ + F + W D RL+ +
Sbjct: 42 MYDARIRPSGVNGTDGPTVVNINFFLRSISKIDDYKMEYSVQLTFREQWLDERLKF-NDF 100
Query: 240 TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALM 299
+ L + +W PD FF N K F + +PN Y+ ++ ++LY ++ ++L
Sbjct: 101 GGRLKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPYGSVLYSIR---ISLT 157
Query: 300 EYCLVNIVL 308
C +N+ L
Sbjct: 158 LSCPMNLKL 166
>gi|307172928|gb|EFN64095.1| Glutamate-gated chloride channel [Camponotus floridanus]
Length = 331
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 37 RISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 96
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 97 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPA 156
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 157 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 195
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 29/124 (23%)
Query: 291 VKFVFMALMEYCLVNIV----LGDSDLPK--PPEPAKQ----DKIFELAAKENARLLTGQ 340
+ FVF AL+E+ LVN + ++ K PP + D EL + + +
Sbjct: 196 LTFVFGALLEFALVNYASRSDMHSDNIKKQFPPSEMEHSSSIDPSSELLEPDGSANFAMK 255
Query: 341 PMI-------------------PPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILN 381
P++ P + R+ + TR+ ID SR+FFP++FA N
Sbjct: 256 PLVRHPEDSMSMDKLRQCEIHMQPRKKNCCRSWLSKFPTRSKRIDVISRIFFPIVFAFFN 315
Query: 382 CTYW 385
YW
Sbjct: 316 LAYW 319
>gi|110555514|gb|ABG75737.1| glutamate-gated chloride channel [Apis mellifera]
Length = 447
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 153 RISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 212
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 213 KFFTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPA 272
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 273 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDIWTGVC 311
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 184 YD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMT 240
YD ++RP + P IV ++ V + +I + M Y+ + F + W D RLR +
Sbjct: 43 YDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRF-NDFG 101
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALME 300
+ L + +W PD FF N K F + +PN Y+ ++ + ++LY ++ ++L
Sbjct: 102 GRLKYLTLTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTL 158
Query: 301 YCLVNIVL 308
C +N+ L
Sbjct: 159 SCPMNLKL 166
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 29/122 (23%)
Query: 293 FVFMALMEYCLVNIV----LGDSDLPK--PPEPAKQDKIFELAAKE----NARLLTGQPM 342
FVF AL+E+ LVN + ++ K PP +Q +L + + N+ +P+
Sbjct: 314 FVFGALLEFALVNYASRSDMHSDNIEKKYPPSETEQSTSMDLPSDQVEPDNSSNFAMKPL 373
Query: 343 I-------------------PPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCT 383
+ P + R+ + TR+ ID SR+FFP++FA N
Sbjct: 374 VRQPEDTMSVDRMQHCELHMQPRKKNCCRSWLSKFPTRSKRIDVISRIFFPIVFAFFNLA 433
Query: 384 YW 385
YW
Sbjct: 434 YW 435
>gi|118150476|ref|NP_001071277.1| glutamate-gated chloride channel precursor [Apis mellifera]
gi|110555516|gb|ABG75738.1| glutamate-gated chloride channel [Apis mellifera]
Length = 447
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 153 RISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 212
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 213 KFFTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPA 272
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 273 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDIWTGVC 311
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 184 YD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMT 240
YD ++RP + P +V ++ V + ID+ +M Y+ + F + W D RLR +
Sbjct: 43 YDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRF-NDFG 101
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALME 300
+ L + +W PD FF N K F + +PN Y+ ++ + ++LY ++ ++L
Sbjct: 102 GRLKYLTLTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTL 158
Query: 301 YCLVNIVL 308
C +N+ L
Sbjct: 159 SCPMNLKL 166
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 29/122 (23%)
Query: 293 FVFMALMEYCLVNIV----LGDSDLPK--PPEPAKQDKIFELAAKE----NARLLTGQPM 342
FVF AL+E+ LVN + ++ K PP +Q +L + + N+ +P+
Sbjct: 314 FVFGALLEFALVNYASRSDMHSDNIEKKYPPSETEQSTSMDLPSDQVEPDNSSNFAMKPL 373
Query: 343 I-------------------PPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCT 383
+ P + R+ + TR+ ID SR+FFP++FA N
Sbjct: 374 VRQPEDTMSVDRMQHCELHMQPRKKNCCRSWLSKFPTRSKRIDVISRIFFPIVFAFFNLA 433
Query: 384 YW 385
YW
Sbjct: 434 YW 435
>gi|166851818|ref|NP_001107776.1| glutamate-gated chloride channel isoform b precursor [Tribolium
castaneum]
gi|156447615|gb|ABU63600.1| glutamate-gated chloride channel splice variant 3b [Tribolium
castaneum]
Length = 447
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 153 RISLTLSCPMNLKLYPLDRQICSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 212
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 213 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 272
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 273 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 311
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 183 LYD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENM 239
+YD ++RP G P IV ++ V + ID+ +M Y+ + F + W D RL+ +
Sbjct: 42 MYDARIRPSGVNGTDGPAIVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLKF-NDF 100
Query: 240 TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALM 299
+ L + +W PD FF N K F + +PN Y+ ++ ++LY ++ ++L
Sbjct: 101 GGRLKYLTLTEASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPYGSVLYSIR---ISLT 157
Query: 300 EYCLVNIVL 308
C +N+ L
Sbjct: 158 LSCPMNLKL 166
>gi|380012057|ref|XP_003690106.1| PREDICTED: glutamate-gated chloride channel-like [Apis florea]
Length = 398
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 92 RISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 151
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 152 KFFTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPA 211
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 212 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDIWTGVC 250
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 202 HVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFF 261
++ + + I++ +M Y+ + F + W D RLR + + L + +W PD FF
Sbjct: 3 NIFLRSISKINDYNMEYSVQLTFREQWLDERLRF-NDFGGRLKYLTLTDASRVWMPDLFF 61
Query: 262 KNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 62 SNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLSCPMNLKL 105
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 345 PNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYW 385
P + R+ + TR+ ID SR+FFP++FA N YW
Sbjct: 346 PRKKNCCRSWLSKFPTRSKRIDVISRIFFPIVFAFFNLAYW 386
>gi|385843184|gb|AFI80889.1| GluCl alpha subunit [Phyllotreta striolata]
Length = 447
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 153 RISLTLSCPMNLKLYPLDRQICSLRMASYGWTTDDLVFLWKQGDPVQVVKNLHLPRFTLE 212
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 213 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 272
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 273 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 311
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 181 PKLYD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE 237
P YD ++RP G P IV ++ V + ID+ + Y+ + F + W D RL+
Sbjct: 40 PGRYDARIRPSGVNGTDGPAIVVVNIFVRSISKIDDVTTEYSVQLTFREQWLDERLKF-N 98
Query: 238 NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ + L + +W PD FF N K F + +PN Y+ ++ ++LY ++ ++
Sbjct: 99 DFGGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPTGSVLYSIR---IS 155
Query: 298 LMEYCLVNIVL 308
L C +N+ L
Sbjct: 156 LTLSCPMNLKL 166
>gi|321460850|gb|EFX71888.1| hypothetical protein DAPPUDRAFT_326785 [Daphnia pulex]
Length = 443
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN ++P D Q CSL M S TT+DL+F W P+ V + ++LP+ L
Sbjct: 148 RISLTLSCPMNLKLFPLDRQTCSLSMGSYGWTTEDLVFLWRAGDPVQVTKNLQLPRFALE 207
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K KT C+ +TG ++CL+V + +R YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 208 KFKTDSCNSKTNTGEYSCLKVDLLFRREFSYYLITIYIPCCMLVIVSWVSFWLDANAVPA 267
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ SLPPVSY KA+D + C
Sbjct: 268 RVSLGVTTLLTMATQTTGINNSLPPVSYTKAIDVWTGVC 306
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 181 PKLYDK-MRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE 237
P YD+ +RP G PTIV ++ G+ I +N M ++ + F + W D RL+ E
Sbjct: 35 PAHYDRRIRPSAVNGTDGPTIVDINLMFRGISDISDNKMQFSVILTFREEWLDDRLKF-E 93
Query: 238 NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
NM + L ++ +W PD FF N + F + +PN YV ++ + +LY ++ ++
Sbjct: 94 NMQGRMKYLTLNDPSKVWMPDLFFSNEREGHFHNIIVPNVYVRIFPNGWVLYSIR---IS 150
Query: 298 LMEYCLVNIVL 308
L C +N+ L
Sbjct: 151 LTLSCPMNLKL 161
>gi|6979732|gb|AAF34619.1| glycine receptor alpha 3 subunit [Mus musculus]
Length = 147
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/143 (53%), Positives = 106/143 (74%), Gaps = 1/143 (0%)
Query: 20 YPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLVKNKTAD-CSQVYST 78
+P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L + K C++ Y+T
Sbjct: 5 FPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNT 64
Query: 79 GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLS 138
G FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAPARV LG+T++LT++
Sbjct: 65 GKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMT 124
Query: 139 TQHAKSQASLPPVSYLKAVDAFM 161
TQ + S+ASLP VSY+KA+D +M
Sbjct: 125 TQSSGSRASLPKVSYVKAIDIWM 147
>gi|260175596|gb|ACX33155.1| putative glutamate-gated chloride channel [Rhipicephalus
sanguineus]
Length = 396
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN YP D Q CS+ M S +TT+DL+F W P+ V + + LP+ L
Sbjct: 75 RISLVLSCPMNLKFYPLDKQICSIVMVSYGYTTEDLVFLWKEGDPVQVTKNLHLPRFTLE 134
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ +T C+ +TG ++CL V V KR YYL YIP C++VI+SWVSFW+ P + PA
Sbjct: 135 RFQTDYCTSRTNTGEYSCLRVDLVFKREFSYYLIQIYIPCCMLVIVSWVSFWLDPTSIPA 194
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 195 RVSLGVTTLLTMATQISGINASLPPVSYTKAIDVWTGVC 233
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 218 YAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNH 277
Y + F + W+D RL+ +++ + R L + +W+PD FF N K F + +PN
Sbjct: 2 YTVQMTFREQWRDERLQY-DDLGGQVRYLTLTEPDKLWKPDLFFSNEKEGHFHNIIMPNV 60
Query: 278 YVWLYKDKTILYMVKFVFMALMEYCLVNI 306
+ ++ + +L+ ++ ++L+ C +N+
Sbjct: 61 LLRIHPNGDVLFSIR---ISLVLSCPMNL 86
>gi|351714691|gb|EHB17610.1| Glycine receptor subunit alpha-2, partial [Heterocephalus glaber]
Length = 311
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/147 (53%), Positives = 107/147 (72%), Gaps = 1/147 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPV 151
ARV LG+T++LT++TQ + S+ASLP V
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKV 311
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
Query: 293 FVF 295
Sbjct: 166 LTL 168
>gi|291235045|ref|XP_002737456.1| PREDICTED: glycine receptor, alpha 2-like [Saccoglossus
kowalevskii]
Length = 348
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 111/161 (68%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL L+C MN YP D Q C + +ES TT+ +IF W P +++++ +++PQ +++
Sbjct: 66 RLTLTLACYMNLQNYPMDQQVCEMLLESYGFTTEHVIFDWAPGTAVSLNQNLKMPQFEII 125
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ Y+TGN+T L V F L+R + +Y+ TYIP+ L+V++SWVSFWI +AAPA
Sbjct: 126 NIVETSTTNPYTTGNYTLLVVQFTLRRLMAFYILQTYIPSILLVVLSWVSFWISADAAPA 185
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV LG+T++LT++TQ + ASLP VSY+KA+D +M+ C V
Sbjct: 186 RVGLGITTVLTMTTQSSGILASLPRVSYIKAIDVWMTTCLV 226
>gi|290792377|gb|ADD63685.1| putative glutamate-gated chloride channel [Rhipicephalus microplus]
Length = 323
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN YP D Q CS+ M S +TT+DL+F W P+ V + + LP+ L
Sbjct: 55 RISLVLSCPMNLKFYPLDKQICSIVMVSYGYTTEDLVFLWKEGDPVQVTKNLHLPRFTLE 114
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ +T C+ +TG ++CL V V KR YYL YIP C++VI+SWVSFW+ P + PA
Sbjct: 115 RFQTDYCTSRTNTGEYSCLRVDLVFKREFSYYLIQIYIPCCMLVIVSWVSFWLDPTSIPA 174
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 175 RVSLGVTTLLTMATQISGINASLPPVSYTKAIDVWTGVC 213
>gi|115361509|gb|ABI95855.1| glutamate-gated chloride channel alpha subunit, partial
[Lepeophtheirus salmonis]
Length = 443
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 109/161 (67%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C M+ +YP D Q C +++ S TTDDLI++W + P+ + + LP+ +L
Sbjct: 150 RISLTLACPMDLKLYPLDRQVCEMRIASYGWTTDDLIYRWKSKDPVQFVQDLNLPRFKLE 209
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
T+ C+ +TG ++CL++ V KR YYL Y+P+C++VI+SWVSFW+ ++ PA
Sbjct: 210 SFSTSYCNSKTNTGEYSCLKINLVFKREFSYYLLTIYVPSCMLVIISWVSFWLDSKSVPA 269
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV LGVT+LLT+STQ A SLPPV+Y KA+D ++ AC +
Sbjct: 270 RVALGVTTLLTMSTQTAGVNRSLPPVAYTKAIDVWIGACVI 310
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 181 PKLYDK-MRPPKKEG----QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRL 235
P YDK +RPP PT+V + + +D ID+ M Y+ + F + W D RL +
Sbjct: 35 PLRYDKRIRPPGSSNLTGPSPTVVTINTYLRAIDRIDDYKMEYSVQLTFRENWMDSRL-M 93
Query: 236 PENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
++ + + L + + +W PD+FF+N K F + +PN YV ++ ++LY ++
Sbjct: 94 FNDLNGKIKYLTLTDAEKVWMPDTFFQNEKLGHFHNIIVPNVYVRIFPTGSVLYSIR 150
>gi|390179629|ref|XP_003736945.1| GA20421, isoform E [Drosophila pseudoobscura pseudoobscura]
gi|388859927|gb|EIM53018.1| GA20421, isoform E [Drosophila pseudoobscura pseudoobscura]
Length = 342
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 157 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 216
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 217 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 276
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 277 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 315
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEGQP---TIV 199
Y A+ F S C+ S + + ++ K+ D ++RP G T+V
Sbjct: 6 YFWAIFYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTANLATMV 65
Query: 200 YFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDS 259
++ + + ID+ M Y+ + F + W D RL+ +++ + L + +W PD
Sbjct: 66 KVNMFLRSISKIDDYKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDL 124
Query: 260 FFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
FF N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 170
>gi|194741318|ref|XP_001953136.1| GF17614 [Drosophila ananassae]
gi|190626195|gb|EDV41719.1| GF17614 [Drosophila ananassae]
Length = 498
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 202 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 261
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 262 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 321
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 322 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 360
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 197 TIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWR 256
TIV ++ + + ID+ M Y+ + F + W D RL+ +++ + L + +W
Sbjct: 108 TIVKVNMYLRSISKIDDYKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWM 166
Query: 257 PDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
PD FF N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 167 PDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 215
>gi|194899919|ref|XP_001979505.1| GG23471 [Drosophila erecta]
gi|190651208|gb|EDV48463.1| GG23471 [Drosophila erecta]
Length = 453
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 157 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 216
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 217 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 276
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 277 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 315
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG---QPTIV 199
Y A+ F S C+ S + + ++ K+ D ++RP G + T V
Sbjct: 6 YFWAILYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDNKATNV 65
Query: 200 YFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDS 259
++ + + ID+ M Y+ + F + W D RL+ +++ + L + +W PD
Sbjct: 66 SVNMFLRSISKIDDYKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDL 124
Query: 260 FFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
FF N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 170
>gi|408745706|gb|AFU88787.1| glutamate-gated chloride channel 2 [Tetranychus cinnabarinus]
Length = 550
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL+L LSC MN YP D Q C ++M S +TT+DL+F W P+ V +++ LP L
Sbjct: 178 RLSLILSCPMNLKYYPLDKQNCYIKMASYGYTTEDLVFMWKKTDPVQVTKQLHLPTFALA 237
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
T C+ +TG ++C++V + +R YYL YIP ++VI+SWVSFW+ P A PA
Sbjct: 238 DYITEYCTSRTNTGEYSCVQVKLIFRREFSYYLIQIYIPCIMLVIVSWVSFWLDPNAIPA 297
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY+KA+D + C
Sbjct: 298 RVSLGVTTLLTMATQISGINASLPPVSYIKAIDVWTGVC 336
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 196 PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMW 255
P IV ++ + + I + M Y+ I F + WKD RL + + + + R L + +W
Sbjct: 83 PCIVSINIYLRSISKISDLDMEYSVQITFREEWKDSRL-VYRDPSEKIRYLTLTDPDRIW 141
Query: 256 RPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNI 306
+PD FF N K F + +PN + + D +LY ++ ++L+ C +N+
Sbjct: 142 KPDVFFTNEKEGHFHNIIMPNVLLRIGSDGGVLYSIR---LSLILSCPMNL 189
>gi|281362085|ref|NP_001163655.1| GluClalpha, isoform F [Drosophila melanogaster]
gi|272477053|gb|ACZ94951.1| GluClalpha, isoform F [Drosophila melanogaster]
Length = 349
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 314
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 16/168 (9%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG--QPTIVY 200
Y A+ F S C+ S + + ++ K+ D ++RP G P +V
Sbjct: 6 YFWAILYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVR 65
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ V + ID+ +M Y+ + F + W D RL+ +++ + L + +W PD F
Sbjct: 66 VNIFVRSISKIDDVTMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLF 124
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 169
>gi|313849052|dbj|BAJ41378.1| glutamate-gated chloride channel subunit [Tetranychus urticae]
Length = 542
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL+L LSC MN YP D Q C ++M S +TT+DL+F W P+ V +++ LP L
Sbjct: 170 RLSLILSCPMNLKYYPLDKQNCYIKMASYGYTTEDLVFMWKKTDPVQVTKQLHLPTFALA 229
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
T C+ +TG ++C++V + +R YYL YIP ++VI+SWVSFW+ P A PA
Sbjct: 230 DYITEYCTSRTNTGEYSCVQVKLIFRREFSYYLIQIYIPCIMLVIVSWVSFWLDPNAIPA 289
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY+KA+D + C
Sbjct: 290 RVSLGVTTLLTMATQISGINASLPPVSYIKAIDVWTGVC 328
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 10/129 (7%)
Query: 184 YDK-MRP----PKKEGQ-PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE 237
YD+ +RP EG P IV ++ + + I + M Y+ I F + WKD RL +
Sbjct: 57 YDRRIRPSGLNASAEGDGPCIVSINIYLRSISKISDLDMEYSVQITFREEWKDSRL-VYR 115
Query: 238 NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ + + R L + +W+PD FF N K F + +PN + + D +LY ++ ++
Sbjct: 116 DPSEKIRYLTLTDPDRIWKPDVFFTNEKEGHFHNIIMPNVLLRIGSDGGVLYSIR---LS 172
Query: 298 LMEYCLVNI 306
L+ C +N+
Sbjct: 173 LILSCPMNL 181
>gi|442619964|ref|NP_001262740.1| GluClalpha, isoform J [Drosophila melanogaster]
gi|440217635|gb|AGB96120.1| GluClalpha, isoform J [Drosophila melanogaster]
Length = 457
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 157 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 216
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 217 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 276
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 277 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 315
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG---QPTIV 199
Y A+ F S C+ S + + ++ K+ D ++RP G + T V
Sbjct: 6 YFWAILYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDNKATNV 65
Query: 200 YFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDS 259
++ + + ID+ M Y+ + F + W D RL+ +++ + L + +W PD
Sbjct: 66 SVNMFLRSISKIDDYKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDL 124
Query: 260 FFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
FF N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 170
>gi|390179625|ref|XP_003736943.1| GA20421, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859925|gb|EIM53016.1| GA20421, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 452
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 314
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 16/168 (9%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG--QPTIVY 200
Y A+ F S C+ S + + ++ K+ D ++RP G P +V
Sbjct: 6 YFWAIFYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVR 65
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ V + ID+ +M Y+ + F + W D RL+ +++ + L + +W PD F
Sbjct: 66 VNIFVRSISKIDDVTMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLF 124
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 169
>gi|195112120|ref|XP_002000624.1| GI22423 [Drosophila mojavensis]
gi|193917218|gb|EDW16085.1| GI22423 [Drosophila mojavensis]
Length = 493
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 197 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 256
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 257 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 316
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 317 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 355
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 196 PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMW 255
P +V ++ V + ID+ +M Y+ + F + W D RL+ +++ + L + +W
Sbjct: 102 PAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVW 160
Query: 256 RPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
PD FF N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 161 MPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 210
>gi|390179627|ref|XP_003736944.1| GA20421, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388859926|gb|EIM53017.1| GA20421, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 274
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 89 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 148
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 149 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 208
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 209 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 247
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 208 LDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAV 267
+ ID+ M Y+ + F + W D RL+ +++ + L + +W PD FF N K
Sbjct: 6 ISKIDDYKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLFFSNEKEG 64
Query: 268 TFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 65 HFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 102
>gi|442619966|ref|NP_001163656.2| GluClalpha, isoform K [Drosophila melanogaster]
gi|440217636|gb|ACZ94952.2| GluClalpha, isoform K [Drosophila melanogaster]
Length = 447
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 314
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG--QPTIVY 200
Y A+ F S C+ S + + ++ K+ D ++RP G P IV
Sbjct: 6 YFWAILYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAIVR 65
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ V + +I + M Y+ + F + W D RL+ +++ + L + +W PD F
Sbjct: 66 INLFVRSIMTISDIKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLF 124
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 169
>gi|442619970|ref|NP_650827.3| GluClalpha, isoform M [Drosophila melanogaster]
gi|195353590|ref|XP_002043287.1| GM26860 [Drosophila sechellia]
gi|195498017|ref|XP_002096345.1| GE25622 [Drosophila yakuba]
gi|194127401|gb|EDW49444.1| GM26860 [Drosophila sechellia]
gi|194182446|gb|EDW96057.1| GE25622 [Drosophila yakuba]
gi|440217638|gb|AAF55695.2| GluClalpha, isoform M [Drosophila melanogaster]
Length = 456
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 314
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG--QPTIVY 200
Y A+ F S C+ S + + ++ K+ D ++RP G P IV
Sbjct: 6 YFWAILYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAIVR 65
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ V + +I + M Y+ + F + W D RL+ +++ + L + +W PD F
Sbjct: 66 INLFVRSIMTISDIKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLF 124
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 169
>gi|295293232|ref|NP_001171233.1| glutamate-gated chloride channel isoform 2 precursor [Nasonia
vitripennis]
gi|269856299|gb|ACZ51432.1| glutamate-gated chloride channel [Nasonia vitripennis]
Length = 449
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TT DL+F W P+ V + + LP+ L
Sbjct: 157 RISLTLSCPMNLKLYPLDRQICSLRMASYGWTTADLVFLWKEGDPVQVVKNLHLPRFTLE 216
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 217 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPA 276
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 277 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 315
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 181 PKLYD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE 237
P YD ++RP + G P +V ++ V + ID+ +M Y+ + F + W D RLR
Sbjct: 44 PGSYDARIRPSGENGTDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWVDERLRF-N 102
Query: 238 NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ + + L + +W PD FF N K F + +PN Y+ ++ D ++LY ++ ++
Sbjct: 103 DFGGKLKYLTLTDASRVWMPDLFFANEKEGHFHNIIMPNVYIRIFPDGSVLYSIR---IS 159
Query: 298 LMEYCLVNIVL 308
L C +N+ L
Sbjct: 160 LTLSCPMNLKL 170
>gi|442619968|ref|NP_001014641.2| GluClalpha, isoform L [Drosophila melanogaster]
gi|440217637|gb|AAX52967.2| GluClalpha, isoform L [Drosophila melanogaster]
Length = 448
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 157 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 216
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 217 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 276
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 277 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 315
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 17/169 (10%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG---QPTIV 199
Y A+ F S C+ S + + ++ K+ D ++RP G + T V
Sbjct: 6 YFWAILYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDNKATNV 65
Query: 200 YFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDS 259
++ + + ID+ M Y+ + F + W D RL+ +++ + L + +W PD
Sbjct: 66 SVNMFLRSISKIDDYKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDL 124
Query: 260 FFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
FF N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 170
>gi|62901525|sp|Q94900.2|GLUCL_DROME RecName: Full=Glutamate-gated chloride channel; Short=DrosGluCl;
Flags: Precursor
Length = 456
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 314
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG--QPTIVY 200
Y A+ F S C+ S + + ++ K+ D ++RP G P IV
Sbjct: 6 YFWAILYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAIVR 65
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ V + +I + M Y+ + F + W D RL+ +++ + L + +W PD F
Sbjct: 66 INLFVRSIMTISDIKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLF 124
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 169
>gi|442619960|ref|NP_001034061.2| GluClalpha, isoform H [Drosophila melanogaster]
gi|440217633|gb|ABC66182.2| GluClalpha, isoform H [Drosophila melanogaster]
Length = 447
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 314
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 16/168 (9%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG--QPTIVY 200
Y A+ F S C+ S + + ++ K+ D ++RP G P +V
Sbjct: 6 YFWAILYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVR 65
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ V + ID+ +M Y+ + F + W D RL+ +++ + L + +W PD F
Sbjct: 66 VNIFVRSISKIDDVTMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLF 124
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 169
>gi|281362083|ref|NP_001163654.1| GluClalpha, isoform E [Drosophila melanogaster]
gi|113204889|gb|ABI34178.1| IP16167p [Drosophila melanogaster]
gi|272477052|gb|ACZ94950.1| GluClalpha, isoform E [Drosophila melanogaster]
Length = 263
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 78 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 137
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 138 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 197
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 198 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 236
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 218 YAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNH 277
Y+ + F + W D RL+ +++ + L + +W PD FF N K F + +PN
Sbjct: 5 YSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNV 63
Query: 278 YVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 64 YIRIFPNGSVLYSIR---ISLTLACPMNLKL 91
>gi|295293230|ref|NP_001171232.1| glutamate-gated chloride channel isoform 1 precursor [Nasonia
vitripennis]
gi|269856297|gb|ACZ51431.1| glutamate-gated chloride channel [Nasonia vitripennis]
Length = 449
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TT DL+F W P+ V + + LP+ L
Sbjct: 157 RISLTLSCPMNLKLYPLDRQICSLRMASYGWTTADLVFLWKEGDPVQVVKNLHLPRFTLE 216
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 217 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPA 276
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 277 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 315
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 181 PKLYD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE 237
P YD ++RP + G P IV ++ V + +I + M Y+ + F + W D RLR
Sbjct: 44 PGSYDARIRPSGENGTDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWVDERLRF-N 102
Query: 238 NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ + + L + +W PD FF N K F + +PN Y+ ++ D ++LY ++ ++
Sbjct: 103 DFGGKLKYLTLTDASRVWMPDLFFANEKEGHFHNIIMPNVYIRIFPDGSVLYSIR---IS 159
Query: 298 LMEYCLVNIVL 308
L C +N+ L
Sbjct: 160 LTLSCPMNLKL 170
>gi|195054531|ref|XP_001994178.1| GH15301 [Drosophila grimshawi]
gi|195395766|ref|XP_002056505.1| GJ10981 [Drosophila virilis]
gi|193896048|gb|EDV94914.1| GH15301 [Drosophila grimshawi]
gi|194143214|gb|EDW59617.1| GJ10981 [Drosophila virilis]
Length = 456
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 314
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG--QPTIVY 200
Y A+ F S C+ S + + ++ K+ D ++RP G P IV
Sbjct: 6 YFWAIFYFTSLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAIVR 65
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ V + +I + M Y+ + F + W D RL+ +++ + L + +W PD F
Sbjct: 66 INLFVRSIMTISDIKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLF 124
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 169
>gi|125778576|ref|XP_001360046.1| GA20421, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|54639797|gb|EAL29199.1| GA20421, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 456
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 314
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG--QPTIVY 200
Y A+ F S C+ S + + ++ K+ D ++RP G P IV
Sbjct: 6 YFWAIFYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAIVR 65
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ V + +I + M Y+ + F + W D RL+ +++ + L + +W PD F
Sbjct: 66 INLFVRSIMTISDIKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLF 124
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 169
>gi|46409071|dbj|BAD16657.1| glutamate-gated chloride channel subunit type A [Musca domestica]
Length = 458
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 314
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 184 YD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMT 240
YD ++RP G P IV ++ V + +I + M Y+ + F + W D RL+ ++M
Sbjct: 46 YDARIRPSGINGTDGPAIVRINLFVRSIMTISDIKMEYSVQLTFREQWTDERLKF-DDMQ 104
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALME 300
+ L + +W PD FF N K F + +PN Y+ ++ + ++LY ++ ++L
Sbjct: 105 GRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTL 161
Query: 301 YCLVNIVL 308
C +N+ L
Sbjct: 162 ACPMNLKL 169
>gi|3420880|gb|AAC31949.1| glutamate gated chloride channel [Lucilia cuprina]
Length = 452
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 157 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 216
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 217 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 276
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 277 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 315
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEGQ---PTIV 199
Y A+ F S C+ S + + ++ K+ D ++RP G PT V
Sbjct: 6 YFWAIFYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTENLPTYV 65
Query: 200 YFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDS 259
Y ++ + + ID+ M Y+ + F + W D RL+ +++ + L + +W PD
Sbjct: 66 YVNMFLRSISKIDDYKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDL 124
Query: 260 FFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
FF N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 170
>gi|442619962|ref|NP_732447.2| GluClalpha, isoform I [Drosophila melanogaster]
gi|440217634|gb|AAN13808.2| GluClalpha, isoform I [Drosophila melanogaster]
Length = 456
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 314
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 16/168 (9%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG--QPTIVY 200
Y A+ F S C+ S + + ++ K+ D ++RP G P +V
Sbjct: 6 YFWAILYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVR 65
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ V + ID+ +M Y+ + F + W D RL+ +++ + L + +W PD F
Sbjct: 66 VNIFVRSISKIDDVTMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLF 124
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 169
>gi|269785259|ref|NP_001161557.1| glycine receptor alpha 3 subunit-like protein precursor
[Saccoglossus kowalevskii]
gi|268054101|gb|ACY92537.1| glycine receptor alpha 3 subunit-like protein [Saccoglossus
kowalevskii]
Length = 450
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 110/159 (69%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL ++C M +P D Q C L+MES S+T D+ +F W P+ ++ +EL Q ++
Sbjct: 178 RLTLTVACHMQLSRFPMDEQHCKLKMESYSYTVDEPVFVWTDYRPVQHEDDLELQQFDIL 237
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N+T + +Y TGNF+ LE+ + L R+LGYY+ T++P+ L+V++SWVSFWI PEAAPA
Sbjct: 238 ENETIEIVHMYHTGNFSALELHYTLHRKLGYYIISTFLPSSLLVVLSWVSFWINPEAAPA 297
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV L +T++LT++T + LP VSY+ AVD +MS+C
Sbjct: 298 RVALCITTVLTITTMAIAVRDDLPKVSYVTAVDVWMSSC 336
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 158 DAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMT 217
D S+ V+STS N +L K YDK P +G P V + + +D+I+E +M
Sbjct: 50 DGDHSSHNVTSTSTFLNTLL----KTYDKRIRPNFDGDPVNVTVDMLISRIDNINEVTMD 105
Query: 218 YAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNH 277
Y I QTW D RL N ++ + L+ +W PD FF N K F T N
Sbjct: 106 YGITIVLRQTWVDTRLEY--NAVKQHIPPTSELLERIWVPDMFFTNEKDSHFHDQTRDNV 163
Query: 278 YVWLYKDKTILYMVKFVF 295
+ + ILY +
Sbjct: 164 LLRISPSGEILYSTRLTL 181
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQD-KIFELAAKENARLLTGQPMIPP---NHQ 348
FVF +L+E+ VN V S L K + K D KI K+ L P N +
Sbjct: 339 FVFGSLVEFAFVNFV---SSLRKNEKKKKTDLKINVEKTKDGNDLADAVEKCLPQAINIE 395
Query: 349 QAQR---NLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+ +R + ++ R RA+ +D+ +R+ FP+L+ I N +W ++
Sbjct: 396 KCERCGTHASRYWRKRALFVDKVARIVFPLLYFIFNIMFWPIY 438
>gi|332294196|gb|AEE39458.1| glutamate-gated chloride channel [Laodelphax striatella]
gi|384568996|gb|AFI09243.1| glutamate-gated chloride channel [Laodelphax striatella]
Length = 452
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 160 RISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 219
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A A
Sbjct: 220 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVSA 279
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 280 RVSLGVTTLLTMATQTSGIDASLPPVSYTKAIDVWTGVC 318
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 181 PKLYD-KMRPP--KKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE 237
P YD ++RP + P +V ++ V + ID+ +M Y+ + F + W D RL+
Sbjct: 47 PSSYDARIRPSGVNQTDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLKF-N 105
Query: 238 NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ + + L + +W PD FF N K F + +PN Y+ ++ ++LY ++ ++
Sbjct: 106 DFGGKIKYLTLTEANRVWMPDLFFSNEKEGRFHNIIMPNVYIRIFPYGSVLYSIR---IS 162
Query: 298 LMEYCLVNIVL 308
L C +N+ L
Sbjct: 163 LTLSCPMNLKL 173
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 31/122 (25%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFEL---AAKENARLL-----TGQPMIP 344
FVF AL+E+ LVN SD+ + + KQ + EL A+ E A L T PM P
Sbjct: 321 FVFGALLEFALVNYA-SRSDMHRD-QMQKQRRQCELEHAASLEAAADLLQDGGTNFPMKP 378
Query: 345 ---------------------PNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCT 383
P+ R+ + TR+ ID SR+ FP++FA+ N T
Sbjct: 379 LVRSGDQTLEKMRQCKVHMQQPHRPNCCRSWLSKFPTRSKRIDVISRITFPLVFALFNLT 438
Query: 384 YW 385
YW
Sbjct: 439 YW 440
>gi|3559846|emb|CAA05260.1| DrosGluCl [Drosophila melanogaster]
Length = 454
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + +R YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFRREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 314
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 16/168 (9%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG--QPTIVY 200
Y A+ F S C+ S + + ++ K+ D ++RP G P +V
Sbjct: 6 YFWAILYFASLCSASLANNAKVNFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVR 65
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ V + ID+ +M Y+ + F + W D RL+ +++ + L + +W PD F
Sbjct: 66 VNIFVRSISKIDDVTMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLF 124
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 169
>gi|384568998|gb|AFI09244.1| glutamate-gated chloride channel [Laodelphax striatella]
Length = 459
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TTDDL+F W P+ V + + LP+ L
Sbjct: 160 RISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLE 219
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL IP C++VI+SWVSFW+ A PA
Sbjct: 220 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQICIPCCMLVIVSWVSFWLDQSAVPA 279
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 280 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 318
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 181 PKLYD-KMRPP--KKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE 237
P YD ++RP + P +V ++ V + ID+ +M Y+ + F + W D RL+
Sbjct: 47 PSSYDARIRPSGVNQTDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLKF-N 105
Query: 238 NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ + + L + +W PD FF N K F + +PN Y+ ++ ++LY ++ ++
Sbjct: 106 DFGGKIKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPYGSVLYSIR---IS 162
Query: 298 LMEYCLVNIVL 308
L C +N+ L
Sbjct: 163 LTLSCPMNLKL 173
>gi|382928885|gb|AFG29908.1| glutamate-gated chloride channel 3, partial [Tetranychus urticae]
Length = 511
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL+L LSC MN YP D Q C ++M S +TT+DL+F W P+ V +++ LP L
Sbjct: 154 RLSLILSCPMNLKYYPLDKQNCYIKMASYGYTTEDLVFMWKKTDPVQVTKQLHLPTFALA 213
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
T C+ +TG ++C++V + +R YYL YIP +++I+SWVSFW+ P A PA
Sbjct: 214 DYITEYCTSRTNTGEYSCVQVKLIFRREFSYYLIQIYIPCIMLIIVSWVSFWLDPNAIPA 273
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY+KA+D + C
Sbjct: 274 RVSLGVTTLLTMATQISGINASLPPVSYIKAIDVWTEVC 312
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 10/129 (7%)
Query: 184 YDK-MRP----PKKEGQ-PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE 237
YD+ +RP EG P IV ++ + + I + M Y+ I F + WKD RL +
Sbjct: 41 YDRRIRPSGLNASAEGDGPCIVSINIYLRSISKISDLDMEYSVQITFREEWKDSRL-VYR 99
Query: 238 NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ + + R L + +W+PD FF N K F + +PN + + D +LY ++ ++
Sbjct: 100 DPSEKIRYLTLTDPDRIWKPDVFFTNEKEGHFHNIIMPNVLLRIGSDGGVLYSIR---LS 156
Query: 298 LMEYCLVNI 306
L+ C +N+
Sbjct: 157 LILSCPMNL 165
>gi|1507685|gb|AAC47266.1| glutamate-gated chloride channel [Drosophila melanogaster]
Length = 456
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + +R YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFRREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 314
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG--QPTIVY 200
Y A+ F S C+ S + + ++ K+ D ++RP G P IV
Sbjct: 6 YFWAILYFASLCSASLANNAKVNFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAIVR 65
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ V + +I + M Y+ + F + W D RL+ +++ + L + +W PD F
Sbjct: 66 INLFVRSIMTISDIKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLF 124
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 169
>gi|242018688|ref|XP_002429806.1| DrosGluCl, putative [Pediculus humanus corporis]
gi|212514818|gb|EEB17068.1| DrosGluCl, putative [Pediculus humanus corporis]
Length = 369
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TT DL+F W P+ V + + LP+ L
Sbjct: 76 RISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTADLVFLWKVGDPVQVVKNLHLPRFTLE 135
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 136 KFFTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPA 195
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 196 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 234
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M Y+ + F + W D RL+ + + L + +W PD FF N K F + +P
Sbjct: 1 MEYSVQLTFREQWLDERLKF-NDFEGRIKYLTLTDANRVWMPDLFFSNEKEGHFHNIIMP 59
Query: 276 NHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
N Y+ ++ ++LY ++ ++L C +N+ L
Sbjct: 60 NVYIRIFPHGSVLYSIR---ISLTLSCPMNLKL 89
>gi|110277453|gb|ABG57261.1| glutamate-gated chloride channel [Drosophila melanogaster]
Length = 453
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + +R YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFRREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 314
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 16/168 (9%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG--QPTIVY 200
Y A+ F S C+ S + + ++ K+ D ++RP G P +V
Sbjct: 6 YFWAILYFASLCSASLANNAKVNFREKEKKVLDQILGAGKYDARVRPSGINGTDGPAVVR 65
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ V + ID+ +M Y+ + F + W D RL+ +++ + L + +W PD F
Sbjct: 66 VNIFVRSISKIDDVTMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLF 124
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 169
>gi|307215192|gb|EFN89964.1| Glutamate-gated chloride channel [Harpegnathos saltator]
Length = 331
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q CSL+M S TT DL+F W P+ V + + LP+ L
Sbjct: 37 RISLTLSCPMNLKLYPLDRQICSLRMASYGWTTADLVFLWKEGDPVQVVKNLHLPRFTLE 96
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 97 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQSAVPA 156
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 157 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 195
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 29/124 (23%)
Query: 291 VKFVFMALMEYCLVNIVLGD---SDLPKPPEPAKQ-------DKIFELAAKENARLLTGQ 340
+ FVF AL+E+ LVN SD K PA + D EL + + +
Sbjct: 196 LTFVFGALLEFALVNYASRSDMHSDNIKKQFPASEMEHSSSIDPSSELLEPDGSASFAMK 255
Query: 341 PMI-------------------PPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILN 381
P++ P + R+ + TR+ ID SR+FFP++FA N
Sbjct: 256 PLVRHPEDSMSMEKLRQCEIHMQPRKKNCCRSWLSKFPTRSKRIDVISRIFFPIVFAFFN 315
Query: 382 CTYW 385
TYW
Sbjct: 316 LTYW 319
>gi|347965893|ref|XP_003435830.1| AGAP001434-PB [Anopheles gambiae str. PEST]
gi|333470306|gb|EGK97583.1| AGAP001434-PB [Anopheles gambiae str. PEST]
Length = 456
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQVCSLRMASYGWTTADLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 314
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 7/128 (5%)
Query: 184 YD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMT 240
YD ++RP G P IV ++ V + +I + M Y+ + F + W D RL+ +++
Sbjct: 46 YDARIRPSGINGTDGPAIVRINLFVRSIMTISDIKMEYSVQLTFREQWLDERLKF-DDIG 104
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALME 300
+ L + +W PD FF N K F + +PN Y+ ++ ++LY ++ ++L
Sbjct: 105 GRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPYGSVLYSIR---ISLTL 161
Query: 301 YCLVNIVL 308
C +N+ L
Sbjct: 162 ACPMNLKL 169
>gi|158302056|ref|XP_321696.3| AGAP001434-PA [Anopheles gambiae str. PEST]
gi|157012769|gb|EAA01752.3| AGAP001434-PA [Anopheles gambiae str. PEST]
Length = 457
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT DL+F W P+ V + + LP+ L
Sbjct: 157 RISLTLACPMNLKLYPLDRQVCSLRMASYGWTTADLVFLWKEGDPVQVVKNLHLPRFTLE 216
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 217 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 276
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 277 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 315
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 184 YD-KMRPPKKEG---QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENM 239
YD ++RP G + T V+ ++ + + ID+ M Y+ + F + W D RL+ +++
Sbjct: 46 YDARIRPSGINGTDDKATQVFVNMFLRSISKIDDYKMEYSVQLTFREQWLDERLKF-DDI 104
Query: 240 TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALM 299
+ L + +W PD FF N K F + +PN Y+ ++ ++LY ++ ++L
Sbjct: 105 GGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPYGSVLYSIR---ISLT 161
Query: 300 EYCLVNIVL 308
C +N+ L
Sbjct: 162 LACPMNLKL 170
>gi|347965891|ref|XP_003435829.1| AGAP001434-PC [Anopheles gambiae str. PEST]
gi|333470307|gb|EGK97584.1| AGAP001434-PC [Anopheles gambiae str. PEST]
Length = 456
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQVCSLRMASYGWTTADLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 314
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 184 YD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMT 240
YD ++RP G P +V ++ V + ID+ +M Y+ + F + W D RL+ +++
Sbjct: 46 YDARIRPSGINGTDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLKF-DDIG 104
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALME 300
+ L + +W PD FF N K F + +PN Y+ ++ ++LY ++ ++L
Sbjct: 105 GRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPYGSVLYSIR---ISLTL 161
Query: 301 YCLVNIVL 308
C +N+ L
Sbjct: 162 ACPMNLKL 169
>gi|157167907|ref|XP_001662897.1| glutamate-gated chloride channel [Aedes aegypti]
gi|108881514|gb|EAT45739.1| AAEL003003-PA [Aedes aegypti]
Length = 425
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT DL+F W P+ V + + LP+ L
Sbjct: 125 RISLTLACPMNLKLYPLDRQVCSLRMASYGWTTADLVFLWKEGDPVQVVKNLHLPRFTLE 184
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 185 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 244
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 245 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 283
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 196 PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMW 255
P +V ++ V + ID+ +M Y+ + F + W D RL+ +++ + L + +W
Sbjct: 30 PAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLKF-DDIGGRLKYLTLTEANRVW 88
Query: 256 RPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
PD FF N K F + +PN Y+ ++ ++LY ++ ++L C +N+ L
Sbjct: 89 MPDLFFSNEKEGHFHNIIMPNVYIRIFPYGSVLYSIR---ISLTLACPMNLKL 138
>gi|291233007|ref|XP_002736451.1| PREDICTED: glycine receptor, alpha 2-like [Saccoglossus
kowalevskii]
Length = 441
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 113/161 (70%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R +LKL+C M+ +P DTQ C + MES +TT DLIF W + P+ D +++LPQ ++
Sbjct: 157 RYSLKLACYMSLERFPMDTQVCKITMESYGYTTKDLIFDWHADKPIQTDNELKLPQFRIS 216
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
T +C++ Y+TG+FTC+E F L R +GYY+ Y+P+ ++V++SWVSFWI EAAPA
Sbjct: 217 DIVTFNCTKSYTTGSFTCIEATFTLHREVGYYILQAYLPSIILVVLSWVSFWISYEAAPA 276
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV LGVT++LTL+T + ++ LP VSY KA+D +M+ C V
Sbjct: 277 RVALGVTTILTLTTLDSGIRSQLPKVSYPKAIDIWMAVCLV 317
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 180 DPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENM 239
DP YDK PK +G P V + DSI E +M Y IF Q W D RL N
Sbjct: 50 DPDRYDKRFRPKSKGPPVYVLCDFFINSFDSITETTMDYGVSIFMRQRWTDPRLS--HND 107
Query: 240 TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+ L ++ +W PD+FF N K+ T+T+ N +Y+D IL ++
Sbjct: 108 SDPIFLHDI---TRLWTPDAFFTNEKSGHLHTVTVENQIARIYQDGFILCSTRY 158
>gi|11875641|gb|AAG40736.1|AF297501_1 glutamate-gated chloride channel [Drosophila melanogaster]
Length = 336
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASL PVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLSPVSYTKAIDVWTGVC 314
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG--QPTIVY 200
Y A+ F S C+ S + + ++ K+ D ++RP G P +V
Sbjct: 6 YFWAILYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAVVR 65
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ V + ID+ +M Y+ + F + W D RL+ +++ + L + +W D F
Sbjct: 66 VNIFVRSISKIDDVTMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMSDLF 124
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 169
>gi|197101015|ref|NP_001125835.1| glycine receptor subunit beta precursor [Pongo abelii]
gi|55729386|emb|CAH91425.1| hypothetical protein [Pongo abelii]
Length = 497
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 114/162 (70%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECATLAAELPKVSYVKALDVWLIAC 336
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>gi|72000175|ref|NP_001024076.1| Protein AVR-15, isoform a [Caenorhabditis elegans]
gi|6434315|emb|CAB61021.1| Protein AVR-15, isoform a [Caenorhabditis elegans]
Length = 657
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M+ YP D Q+C + + S ++TT D+ + W E P+ + + LP Q
Sbjct: 376 RISLVLSCPMHLQYYPMDVQQCFIDLASYAYTTKDIEYVWKEETPVQLKAGLSSSLPSFQ 435
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG+++CL I L+R+ YYL YIP+C++VI+SWVSFWI A
Sbjct: 436 LTNTSTTYCTSKTNTGSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAV 495
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPV+Y+KA+D ++ AC
Sbjct: 496 PARVTLGVTTLLTMTTQSSGINAKLPPVAYIKAIDVWIGAC 536
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 182 KLYD-KMRPPKKEG----QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
+ YD ++RPP ++G P +V ++ + + ID +M Y+ + F ++W D RL
Sbjct: 261 RGYDHRVRPPGEDGTIHGGPVVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSFG 320
Query: 237 ENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
++ L + + +W PDSFF+N K + PN + ++KD TILY V+
Sbjct: 321 VKGDAQPDFLILTAGQEIWMPDSFFQNEKQAYKHMIDKPNVLIRVHKDGTILYSVRI 377
>gi|2285910|emb|CAA04171.1| GluClalpha2A protein [Caenorhabditis elegans]
Length = 657
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M+ YP D Q+C + + S ++TT D+ + W E P+ + + LP Q
Sbjct: 376 RISLVLSCPMHLQYYPMDVQQCFIDLASYAYTTKDIEYVWKEETPVQLKAGLSSSLPSFQ 435
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG+++CL I L+R+ YYL YIP+C++VI+SWVSFWI A
Sbjct: 436 LTNTSTTYCTSKTNTGSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAV 495
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPV+Y+KA+D ++ AC
Sbjct: 496 PARVTLGVTTLLTMTTQSSGINAKLPPVAYIKAIDVWIGAC 536
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 182 KLYD-KMRPPKKEG----QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
+ YD ++RPP ++G P +V ++ + + ID +M Y+ + F ++W D RL
Sbjct: 261 RGYDHRVRPPGEDGTIHGGPVVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSFG 320
Query: 237 ENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
++ L + + +W PDSFF+N + PN + ++KD TILY V+
Sbjct: 321 VKGDAQPDFLILTAGQEIWMPDSFFQNENQAYKHMIDKPNVLIRVHKDGTILYSVRI 377
>gi|72000177|ref|NP_001024077.1| Protein AVR-15, isoform b [Caenorhabditis elegans]
gi|3879708|emb|CAB03329.1| Protein AVR-15, isoform b [Caenorhabditis elegans]
Length = 478
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M+ YP D Q+C + + S ++TT D+ + W E P+ + + LP Q
Sbjct: 197 RISLVLSCPMHLQYYPMDVQQCFIDLASYAYTTKDIEYVWKEETPVQLKAGLSSSLPSFQ 256
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG+++CL I L+R+ YYL YIP+C++VI+SWVSFWI A
Sbjct: 257 LTNTSTTYCTSKTNTGSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAV 316
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPV+Y+KA+D ++ AC
Sbjct: 317 PARVTLGVTTLLTMTTQSSGINAKLPPVAYIKAIDVWIGAC 357
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 182 KLYD-KMRPPKKEG----QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
+ YD ++RPP ++G P +V ++ + + ID +M Y+ + F ++W D RL
Sbjct: 82 RGYDHRVRPPGEDGTIHGGPVVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSFG 141
Query: 237 ENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
++ L + + +W PDSFF+N K + PN + ++KD TILY V+
Sbjct: 142 VKGDAQPDFLILTAGQEIWMPDSFFQNEKQAYKHMIDKPNVLIRVHKDGTILYSVRI 198
>gi|320461541|ref|NP_571856.1| gylcine receptor, beta a precursor [Danio rerio]
gi|11322386|emb|CAC16688.1| glycine receptor betaZ subunit [Danio rerio]
Length = 498
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC + ++P DTQ C +Q+ES +TT DL+F W P+ +DE I LPQ +
Sbjct: 175 RLSVTLSCPLALQLFPMDTQYCKMQLESFGYTTKDLVFMWQSGDPVQMDE-IALPQFDVK 233
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ K A+C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 234 QEDIKYANCTKFYPGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 293
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+LS++ + LP VSY+KA+D +M AC
Sbjct: 294 SAARVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWMIAC 335
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLL----MTYDSRIRPNFKGIPVEDKVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKT 286
W D RLRLP + S+ ++ + +W+PD FF N K F +T N ++++++
Sbjct: 110 RWNDPRLRLPTDFKSDALTVDPKMFQCLWKPDLFFANEKNANFHDVTQENILLFIFRNGD 169
Query: 287 ILYMVKF 293
+L ++
Sbjct: 170 VLISMRL 176
>gi|2285912|emb|CAA04170.1| GluClalpha2B protein [Caenorhabditis elegans]
Length = 478
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M+ YP D Q+C + + S ++TT D+ + W E P+ + + LP Q
Sbjct: 197 RISLVLSCPMHLQYYPMDVQQCFIDLASYAYTTKDIEYVWKEETPVQLKAGLSSSLPSFQ 256
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG+++CL I L+R+ YYL YIP+C++VI+SWVSFWI A
Sbjct: 257 LTNTSTTYCTSKTNTGSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAV 316
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPV+Y+KA+D ++ AC
Sbjct: 317 PARVTLGVTTLLTMTTQSSGINAKLPPVAYIKAIDVWIGAC 357
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 182 KLYD-KMRPPKKEG----QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
+ YD ++RPP ++G P +V ++ + + ID +M Y+ + F ++W D RL
Sbjct: 82 RGYDHRVRPPGEDGTIHGGPVVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSFG 141
Query: 237 ENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
++ L + + +W PDSFF+N + PN + ++KD TILY V+
Sbjct: 142 VKGDAQPDFLILTAGQEIWMPDSFFQNENQAYKHMIDKPNVLIRVHKDGTILYSVRI 198
>gi|308504157|ref|XP_003114262.1| CRE-AVR-15 protein [Caenorhabditis remanei]
gi|308261647|gb|EFP05600.1| CRE-AVR-15 protein [Caenorhabditis remanei]
Length = 646
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M+ YP D Q+C + + S ++TT D+ + W E P+ + + + LP Q
Sbjct: 365 RISLVLSCPMHLQYYPMDVQQCFIDLASYAYTTKDIEYIWKVEKPVQLKDGLSSSLPSFQ 424
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL I L+R+ YYL YIP+C++VI+SWVSFWI A
Sbjct: 425 LTNTSTTYCTSKTNTGAYSCLRTILSLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAV 484
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPV+Y+KA+D ++ AC
Sbjct: 485 PARVTLGVTTLLTMTTQSSGINAKLPPVAYIKAIDVWIGAC 525
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 182 KLYD-KMRPPKKEG----QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
+ YD ++RPP ++G P +V ++ + + ID +M Y+ + F ++W D RL
Sbjct: 250 RGYDHRVRPPGEDGTIHGGPVVVTVNMLIRSISKIDNVNMEYSVQLTFRESWVDKRLSYG 309
Query: 237 ENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+ L + + +W PDSFF+N K + PN + ++KD TILY V+
Sbjct: 310 VKGDARPDFLILTAGQEIWMPDSFFQNEKQAYKHMIDKPNILIRVHKDGTILYSVRI 366
>gi|444519297|gb|ELV12724.1| Glutamate receptor 2 [Tupaia chinensis]
Length = 1375
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 153 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 211
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 212 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 271
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 272 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 313
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 218 YAADIFFAQTWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPN 276
Y +IF Q W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N
Sbjct: 78 YRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQEN 137
Query: 277 HYVWLYKDKTILYMVKF 293
+++++D +L ++
Sbjct: 138 ILLFIFRDGDVLVSMRL 154
>gi|341886654|gb|EGT42589.1| hypothetical protein CAEBREN_00846 [Caenorhabditis brenneri]
Length = 640
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 105/161 (65%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M+ YP D Q+C + + S ++TT D+ + W E P+ + + LP Q
Sbjct: 359 RISLVLSCPMHLQYYPMDVQQCFIDLASYAYTTKDIEYVWKEENPVQLKAGLSSSLPSFQ 418
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL I L+R+ YYL YIP+C++VI+SWVSFWI A
Sbjct: 419 LTNTSTTYCTSKTNTGAYSCLRTILQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAV 478
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPV+Y+KA+D ++ AC
Sbjct: 479 PARVTLGVTTLLTMTTQSSGINAKLPPVAYIKAIDVWIGAC 519
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 182 KLYD-KMRPPKKEG----QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
+ YD ++RPP ++G P +V ++ + + ID +M Y+ + F ++W D RL
Sbjct: 244 RGYDHRVRPPGEDGTIHGGPVVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSYG 303
Query: 237 ENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+ L + + +W PDSFF+N K + PN + ++KD TILY V+
Sbjct: 304 VKGDARPDFLILTAGQEIWMPDSFFQNEKQAYKHMIDKPNILIRVHKDGTILYSVRI 360
>gi|268566621|ref|XP_002647598.1| Hypothetical protein CBG06688 [Caenorhabditis briggsae]
Length = 475
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 105/161 (65%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M+ YP D Q+C + + S ++TT D+ + W E P+ + + LP Q
Sbjct: 194 RISLVLSCPMHLQYYPMDVQQCFIDLASYAYTTKDIEYVWKEENPVQLKAGLSSSLPSFQ 253
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL I L+R+ YYL YIP+C++VI+SWVSFWI A
Sbjct: 254 LTNTSTTYCTSKTNTGAYSCLRTILQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAV 313
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPV+Y+KA+D ++ AC
Sbjct: 314 PARVTLGVTTLLTMTTQSSGINAKLPPVAYIKAIDVWIGAC 354
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Query: 184 YD-KMRPPKKEG----QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN 238
YD ++RPP ++G P +V ++ + + ID +M Y+ + F ++W D RL
Sbjct: 81 YDHRVRPPGEDGTIHGGPVVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSYGVK 140
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+ L + + +W PDSFF+N K + PN + ++KD TILY V+
Sbjct: 141 GDARPDFLILTAGQEIWMPDSFFQNEKQAYKHMIDKPNILIRVHKDGTILYSVRI 195
>gi|57525770|ref|NP_001003587.1| glycine receptor subunit beta [Danio rerio]
gi|50417167|gb|AAH78269.1| Glycine receptor, beta b [Danio rerio]
gi|67513948|dbj|BAD99559.1| glycine receptor beta subunit 2 [Danio rerio]
Length = 494
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 127/202 (62%), Gaps = 13/202 (6%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ +DE I LPQ +
Sbjct: 175 RLSVTLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLQFMWQSGDPVQMDE-IALPQFDIK 233
Query: 66 KN--KTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ + +C++ Y+ TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 234 QEDIEYGNCTKYYAGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 293
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV----SSTSLTFNDILP 178
+ ARV LG+ S+L+LS++ + LP VSY+KA+D ++ AC + S ++
Sbjct: 294 SAARVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWLIACLLFGFASLVEYAVVQVML 353
Query: 179 EDPKLYDKMRPP-----KKEGQ 195
PKL + R K EG+
Sbjct: 354 NSPKLLEAERAKIATKEKAEGK 375
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNKLLIT----YDPRIRPNFKGIPVEDRVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKT 286
W D RLRLP++ S+ ++ K +W+PD FF N K+ F +T N ++++++
Sbjct: 110 RWNDPRLRLPQDFKSDSLTVDPKMFKCLWKPDLFFANEKSANFHDVTQENILLFIFRNGD 169
Query: 287 IL 288
+L
Sbjct: 170 VL 171
>gi|11875639|gb|AAG40735.1|AF297500_1 glutamate-gated chloride channel [Drosophila melanogaster]
Length = 456
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + +R YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFRREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASL PVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLSPVSYTKAIDVWTGVC 314
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG--QPTIVY 200
Y A+ F S C+ S + + ++ K+ D ++RP G P IV
Sbjct: 6 YFWAILYFASLCSASLANNAKVNFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAIVR 65
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ V + +I + M Y+ + F + W D RL+ +++ + L + +W PD F
Sbjct: 66 INLFVRSIMTISDIKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLF 124
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 169
>gi|443684184|gb|ELT88193.1| hypothetical protein CAPTEDRAFT_165308 [Capitella teleta]
Length = 328
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 117/199 (58%), Gaps = 6/199 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R +L L C M+ +P D QEC+L +ES +T +++ F+W + + ++ I+ PQ L
Sbjct: 78 RYSLVLVCHMSLRSFPFDNQECNLLLESYGYTLEEMKFEWRSDKDAVQINPHIQFPQFDL 137
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V C + Y TGNFTCL +F L R GYY+ YIP+ LIV++SWVSFWI +A P
Sbjct: 138 VDKNVTYCQKSYITGNFTCLRAVFHLHRHFGYYMIQNYIPSGLIVVLSWVSFWISTDAVP 197
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTVSS--TSLTF---NDILPE 179
AR+TLGV ++LT++TQ SLP VSY+KA+D +MS C +S L F N + +
Sbjct: 198 ARITLGVLTVLTMTTQCVGIWMSLPMVSYIKAIDIWMSTCVMSVFFAMLEFAVVNTMSRK 257
Query: 180 DPKLYDKMRPPKKEGQPTI 198
+ + KMRP I
Sbjct: 258 EARDMAKMRPTADNDDKHI 276
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRL-LEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
M Y DI+ Q+W D RL ++ L L+ +W PD FF N K ++T+
Sbjct: 1 MDYTIDIYMRQSWLDTRLAFKHLFPNDSVLTLDTRLFDKIWVPDLFFPNEKRAQGHSITV 60
Query: 275 PNHYVWLYKDKTILYMVKF 293
PN + + D +L+ ++
Sbjct: 61 PNRLIRISSDGRVLFSARY 79
>gi|149412099|ref|XP_001509830.1| PREDICTED: glycine receptor subunit beta [Ornithorhynchus anatinus]
Length = 497
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K F +T N +++++D
Sbjct: 110 KWNDPRLKLPNDFRGSDALTVDPTMFKCLWKPDLFFANEKNANFHDVTQENILLFIFRDG 169
Query: 286 TIL 288
+L
Sbjct: 170 DVL 172
>gi|432960982|ref|XP_004086524.1| PREDICTED: glycine receptor subunit beta-like [Oryzias latipes]
Length = 495
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 112/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W E P+ +D I LPQ +
Sbjct: 175 RLSVTLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLQFMWQTEDPVQMDA-IALPQFDIR 233
Query: 66 KNKT--ADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 234 QEDIDYGNCTKFYEGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 293
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+LS++ + LP VSY+KA+D ++ AC
Sbjct: 294 SAARVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWLIAC 335
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P ++ + SI E +M Y +IF Q W D RL+LP++ S+
Sbjct: 67 YDPRIRPNFKGIPVEDRVNIFINSFGSIQETTMDYRVNIFLRQRWNDPRLKLPDDFKSDS 126
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
++ K +W+PD FF N K+ F +T N ++++++ +L ++
Sbjct: 127 LTVDPKMFKCLWKPDLFFANEKSANFHDVTQENILLFIFRNGDVLISMRL 176
>gi|281341914|gb|EFB17498.1| hypothetical protein PANDA_007936 [Ailuropoda melanoleuca]
Length = 458
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 137 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 195
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 196 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 255
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 256 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 297
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSM-TYAADIFFA 225
+STS N +L YD P +G P V ++ + SI E +M Y +IF
Sbjct: 14 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMMDYRVNIFLR 69
Query: 226 QTWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKD 284
Q W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 70 QKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRD 129
Query: 285 KTILYMVKF 293
+L ++
Sbjct: 130 GDVLVSMRL 138
>gi|148683499|gb|EDL15446.1| glycine receptor, beta subunit, isoform CRA_b [Mus musculus]
Length = 472
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 152 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 210
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 211 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 270
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 271 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 312
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 30 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 85
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 86 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 145
Query: 286 TILYMVKF 293
+L ++
Sbjct: 146 DVLVSMRL 153
>gi|296478670|tpg|DAA20785.1| TPA: glycine receptor subunit beta precursor [Bos taurus]
Length = 440
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>gi|301767794|ref|XP_002919317.1| PREDICTED: glycine receptor subunit beta-like [Ailuropoda
melanoleuca]
Length = 498
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 177 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 235
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 236 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 295
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 296 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 337
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSM-TYAADIFFA 225
+STS N +L YD P +G P V ++ + SI E +M Y +IF
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMMDYRVNIFLR 109
Query: 226 QTWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKD 284
Q W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 QKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRD 169
Query: 285 KTILYMVKF 293
+L ++
Sbjct: 170 GDVLVSMRL 178
>gi|57096865|ref|XP_532701.1| PREDICTED: glycine receptor subunit beta [Canis lupus familiaris]
Length = 497
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>gi|327274025|ref|XP_003221779.1| PREDICTED: glycine receptor subunit beta-like [Anolis carolinensis]
Length = 497
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYQGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 166 VSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFA 225
V+STS N +L YD P +G P V ++ + SI E +M Y +IF
Sbjct: 53 VNSTSNILNRLLVS----YDPRIRPNFKGIPVDVAVNIFINSFGSIQETTMDYRVNIFLR 108
Query: 226 QTWKDHRLRLPEN-MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKD 284
Q W D RL+LP + SE ++ K +W+PD FF N K F +T N +++++D
Sbjct: 109 QKWNDPRLKLPTDWKGSESLTVDPTMFKCLWKPDLFFANEKNANFHDVTQENILLFIFRD 168
Query: 285 KTIL 288
+L
Sbjct: 169 GDVL 172
>gi|410956676|ref|XP_003984965.1| PREDICTED: glycine receptor subunit beta [Felis catus]
Length = 499
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>gi|395542483|ref|XP_003773159.1| PREDICTED: glycine receptor subunit beta [Sarcophilus harrisii]
Length = 497
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPNDFRGSDALTVDPTMFKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TIL 288
+L
Sbjct: 170 DVL 172
>gi|48374093|ref|NP_001001545.1| glycine receptor subunit beta precursor [Sus scrofa]
gi|47550387|emb|CAG29645.1| glycine receptor beta [Sus scrofa]
Length = 497
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>gi|388454629|ref|NP_001253381.1| glycine receptor subunit beta precursor [Macaca mulatta]
gi|55623408|ref|XP_517504.1| PREDICTED: glycine receptor subunit beta isoform 4 [Pan
troglodytes]
gi|114596543|ref|XP_001141152.1| PREDICTED: glycine receptor subunit beta isoform 3 [Pan
troglodytes]
gi|332217581|ref|XP_003257937.1| PREDICTED: glycine receptor subunit beta isoform 1 [Nomascus
leucogenys]
gi|332217585|ref|XP_003257939.1| PREDICTED: glycine receptor subunit beta isoform 3 [Nomascus
leucogenys]
gi|397504012|ref|XP_003822604.1| PREDICTED: glycine receptor subunit beta isoform 1 [Pan paniscus]
gi|397504014|ref|XP_003822605.1| PREDICTED: glycine receptor subunit beta isoform 2 [Pan paniscus]
gi|402870713|ref|XP_003899350.1| PREDICTED: glycine receptor subunit beta isoform 1 [Papio anubis]
gi|402870715|ref|XP_003899351.1| PREDICTED: glycine receptor subunit beta isoform 2 [Papio anubis]
gi|426345836|ref|XP_004040604.1| PREDICTED: glycine receptor subunit beta isoform 1 [Gorilla gorilla
gorilla]
gi|426345840|ref|XP_004040606.1| PREDICTED: glycine receptor subunit beta isoform 3 [Gorilla gorilla
gorilla]
gi|355749639|gb|EHH54038.1| hypothetical protein EGM_14774 [Macaca fascicularis]
gi|380811852|gb|AFE77801.1| glycine receptor subunit beta isoform A precursor [Macaca mulatta]
gi|383417611|gb|AFH32019.1| glycine receptor subunit beta isoform A precursor [Macaca mulatta]
gi|410215406|gb|JAA04922.1| glycine receptor, beta [Pan troglodytes]
gi|410259510|gb|JAA17721.1| glycine receptor, beta [Pan troglodytes]
gi|410292494|gb|JAA24847.1| glycine receptor, beta [Pan troglodytes]
gi|410341937|gb|JAA39915.1| glycine receptor, beta [Pan troglodytes]
Length = 497
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>gi|296195315|ref|XP_002745336.1| PREDICTED: glycine receptor subunit beta isoform 1 [Callithrix
jacchus]
gi|403272264|ref|XP_003927993.1| PREDICTED: glycine receptor subunit beta [Saimiri boliviensis
boliviensis]
Length = 497
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>gi|344293674|ref|XP_003418546.1| PREDICTED: glycine receptor subunit beta [Loxodonta africana]
Length = 497
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>gi|440904115|gb|ELR54674.1| Glycine receptor subunit beta [Bos grunniens mutus]
Length = 499
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 178 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 236
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 237 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 296
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 297 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 338
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 167 SSTSLTFNDILPE-DPKLYDKMRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFF 224
+STS N +L DP++ RP K + T+ V ++ + SI E +M Y +IF
Sbjct: 54 NSTSNILNRLLVSYDPRI----RPNFKGIKKTVDVVVNIFINSFGSIQETTMDYRVNIFL 109
Query: 225 AQTWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYK 283
Q W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++
Sbjct: 110 RQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFR 169
Query: 284 DKTILYMVKF 293
D +L ++
Sbjct: 170 DGDVLVSMRL 179
>gi|27806605|ref|NP_776496.1| glycine receptor subunit beta precursor [Bos taurus]
gi|75067361|sp|Q9GJS9.1|GLRB_BOVIN RecName: Full=Glycine receptor subunit beta; AltName: Full=Glycine
receptor 58 kDa subunit; Flags: Precursor
gi|10180961|gb|AAG14347.1|AF268376_1 glycine receptor beta subunit [Bos taurus]
gi|10180957|gb|AAG14345.1| glycine receptor beta subunit [Bos taurus]
gi|115305328|gb|AAI23492.1| Glycine receptor, beta [Bos taurus]
Length = 497
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TIL 288
+L
Sbjct: 170 DVL 172
>gi|348582534|ref|XP_003477031.1| PREDICTED: glycine receptor subunit beta-like [Cavia porcellus]
Length = 497
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 174 NDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL 233
+DIL YD P +G P V ++ + SI E +M Y +IF Q W D RL
Sbjct: 57 SDILNRMLVSYDPRIRPNFKGVPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRL 116
Query: 234 RLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D +L ++
Sbjct: 117 KLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMR 176
Query: 293 F 293
Sbjct: 177 L 177
>gi|4504023|ref|NP_000815.1| glycine receptor subunit beta isoform A precursor [Homo sapiens]
gi|260593684|ref|NP_001159532.1| glycine receptor subunit beta isoform A precursor [Homo sapiens]
gi|1346173|sp|P48167.1|GLRB_HUMAN RecName: Full=Glycine receptor subunit beta; AltName: Full=Glycine
receptor 58 kDa subunit; Flags: Precursor
gi|992687|gb|AAB37750.1| glycine receptor beta subunit [Homo sapiens]
gi|3834635|gb|AAC71033.1| glycine receptor beta subunit precursor [Homo sapiens]
gi|3834637|gb|AAC71034.1| glycine receptor beta subunit precursor [Homo sapiens]
gi|21619165|gb|AAH32635.1| Glycine receptor, beta [Homo sapiens]
gi|119625277|gb|EAX04872.1| glycine receptor, beta, isoform CRA_a [Homo sapiens]
gi|119625278|gb|EAX04873.1| glycine receptor, beta, isoform CRA_a [Homo sapiens]
gi|123979912|gb|ABM81785.1| glycine receptor, beta [synthetic construct]
gi|123994677|gb|ABM84940.1| glycine receptor, beta [synthetic construct]
gi|158254666|dbj|BAF83306.1| unnamed protein product [Homo sapiens]
gi|1589657|prf||2211391A Gly receptor:SUBUNIT=beta
Length = 497
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>gi|432116267|gb|ELK37310.1| Glutamate receptor 2, partial [Myotis davidii]
Length = 1521
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 148 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 206
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 207 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 266
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 267 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 308
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 218 YAADIFFAQTWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPN 276
Y +IF Q W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N
Sbjct: 73 YRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQEN 132
Query: 277 HYVWLYKDKTILYMVKF 293
+++++D +L ++
Sbjct: 133 ILLFIFRDGDVLVSMRL 149
>gi|417411189|gb|JAA52040.1| Putative glycine receptor subunit beta, partial [Desmodus rotundus]
Length = 495
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 174 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 232
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 233 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 292
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 293 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 334
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 52 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 107
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 108 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 167
Query: 286 TIL 288
+L
Sbjct: 168 DVL 170
>gi|334331078|ref|XP_001375153.2| PREDICTED: glycine receptor subunit beta-like [Monodelphis
domestica]
Length = 619
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 298 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 356
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 357 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 416
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 417 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 458
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 166 VSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFA 225
+STS N +L YD P +G P V ++ + SI E +M Y +IF
Sbjct: 175 ANSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLR 230
Query: 226 QTWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKD 284
Q W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 231 QKWNDPRLKLPNDFRGSDALTVDPTMFKCLWKPDLFFANEKSANFHDVTQENILLFIFRD 290
Query: 285 KTILYMVKF 293
+L ++
Sbjct: 291 GDVLVSMRL 299
>gi|291401077|ref|XP_002716971.1| PREDICTED: glycine receptor, beta-like [Oryctolagus cuniculus]
Length = 497
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>gi|431901239|gb|ELK08305.1| Glycine receptor subunit beta [Pteropus alecto]
Length = 498
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 177 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 235
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 236 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 295
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 296 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 337
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 55 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 110
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 111 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 170
Query: 286 TIL 288
+L
Sbjct: 171 DVL 173
>gi|351707353|gb|EHB10272.1| Glycine receptor subunit beta [Heterocephalus glaber]
Length = 497
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 174 NDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL 233
+DIL YD P +G P V ++ + SI E +M Y +IF Q W D RL
Sbjct: 57 SDILNRMLVSYDPRIRPNFKGVPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRL 116
Query: 234 RLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D +L ++
Sbjct: 117 KLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMR 176
Query: 293 F 293
Sbjct: 177 L 177
>gi|322789768|gb|EFZ14934.1| hypothetical protein SINV_14298 [Solenopsis invicta]
Length = 527
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 107/169 (63%), Gaps = 10/169 (5%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSH----------TTDDLIFQWDPEMPLAVDE 55
R++L LSC MN +YP D Q CSL+M S ++ TTDDL+F W P+ V +
Sbjct: 130 RISLTLSCPMNLKLYPLDRQICSLRMASCNNNHWSVPTDGWTTDDLVFLWKEGDPVQVVK 189
Query: 56 KIELPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVS 115
+ LP+ L K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVS
Sbjct: 190 NLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVS 249
Query: 116 FWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
FW+ A PARV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 250 FWLDQSAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 298
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 209 DSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVT 268
D +D + Y+ + F + W D RLR + + L + +W PD FF N K
Sbjct: 48 DFLDALAFEYSVQLTFREQWLDERLRF-NDFGGRLKYLTLTEANRVWMPDLFFSNEKEGH 106
Query: 269 FQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 107 FHNIIMPNVYIRIFPNGSVLYSIR---ISLTLSCPMNLKL 143
>gi|149698123|ref|XP_001500672.1| PREDICTED: glycine receptor subunit beta [Equus caballus]
Length = 497
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>gi|47227000|emb|CAG05892.1| unnamed protein product [Tetraodon nigroviridis]
Length = 525
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 116/189 (61%), Gaps = 30/189 (15%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMES-----------------------------LSH 36
RLTL LSC M+ +P D Q C++Q+ES + +
Sbjct: 209 RLTLILSCPMDLKNFPMDVQTCTMQLESCECCFLSFPRLSQRPRALILTHLSRSSLPVGY 268
Query: 37 TTDDLIFQWDPEMPLAVDEKIELPQLQLVKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLG 95
T +DLIF+W + V + + LPQ + K C++ Y+TG FTC+EV F L+R++G
Sbjct: 269 TMNDLIFEWLENGAVQVSDGLTLPQFIMRDEKELGYCTKHYNTGKFTCIEVKFHLERQMG 328
Query: 96 YYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLK 155
YYL YIP+ LIVI+SWVSFWI +AAPARV LG+T++LT++TQ + S+ASLP VSY+K
Sbjct: 329 YYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVK 388
Query: 156 AVDAFMSAC 164
A+D +M+ C
Sbjct: 389 AIDIWMAVC 397
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 190 PKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPENMTSEYRLL 246
P+ G P V ++ + SI E +M Y +IF Q W D RL + P+ L
Sbjct: 108 PQPAGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSKYPDPSLD----L 163
Query: 247 EVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
+ L ++W+PD FF N K F +T N + ++K+ +LY ++ +
Sbjct: 164 DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKNGNVLYSIRLTLI 213
>gi|426247131|ref|XP_004017340.1| PREDICTED: glycine receptor subunit beta [Ovis aries]
Length = 497
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>gi|17865325|ref|NP_445748.1| glycine receptor subunit beta precursor [Rattus norvegicus]
gi|121604|sp|P20781.1|GLRB_RAT RecName: Full=Glycine receptor subunit beta; AltName: Full=Glycine
receptor 58 kDa subunit; Flags: Precursor
gi|13548665|emb|CAC35983.1| glycine receptor beta precursor [Rattus norvegicus]
gi|149048282|gb|EDM00858.1| glycine receptor, beta subunit [Rattus norvegicus]
Length = 496
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 21/152 (13%)
Query: 138 STQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPT 197
S Q A+ A +PP +STS N +L YD P +G P
Sbjct: 41 SQQSAEDLARVPP----------------NSTSNILNRLLVS----YDPRIRPNFKGIPV 80
Query: 198 IVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENM-TSEYRLLEVDWLKNMWR 256
V ++ + SI E +M Y +IF Q W D RL+LP + S+ ++ K +W+
Sbjct: 81 DVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWK 140
Query: 257 PDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
PD FF N K+ F +T N +++++D +L
Sbjct: 141 PDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>gi|508235|gb|AAA61874.1| glycine receptor beta subunit precursor [Mus musculus]
Length = 496
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>gi|31981754|ref|NP_034428.2| glycine receptor subunit beta precursor [Mus musculus]
gi|341940753|sp|P48168.2|GLRB_MOUSE RecName: Full=Glycine receptor subunit beta; AltName: Full=Glycine
receptor 58 kDa subunit; Flags: Precursor
gi|26350383|dbj|BAC38831.1| unnamed protein product [Mus musculus]
gi|54887332|gb|AAH37605.1| Glycine receptor, beta subunit [Mus musculus]
gi|148683498|gb|EDL15445.1| glycine receptor, beta subunit, isoform CRA_a [Mus musculus]
Length = 496
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>gi|410914447|ref|XP_003970699.1| PREDICTED: glycine receptor subunit beta-like [Takifugu rubripes]
Length = 497
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ +DE I LPQ +
Sbjct: 175 RLSVTLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLQFMWQTGDPVQMDE-IALPQFDIR 233
Query: 66 KNKT--ADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ +C++ Y+ TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 234 QEDIDYGNCTKYYAGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 293
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+LS++ + LP VSY+KA+D ++ AC
Sbjct: 294 SAARVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWLIAC 335
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGTPVEDRVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKT 286
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N ++++++
Sbjct: 110 RWNDPRLKLPPDFKSDSLTVDPKMFKCLWKPDLFFANEKSANFHDVTQENILLFIFRNGD 169
Query: 287 ILYMVKF 293
+L ++
Sbjct: 170 VLISMRL 176
>gi|395843984|ref|XP_003794750.1| PREDICTED: glycine receptor subunit beta [Otolemur garnettii]
Length = 480
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 159 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 217
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 218 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 277
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 278 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 319
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 218 YAADIFFAQTWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPN 276
Y +IF Q W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N
Sbjct: 84 YRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQEN 143
Query: 277 HYVWLYKDKTILYMVKF 293
+++++D +L ++
Sbjct: 144 ILLFIFRDGDVLVSMRL 160
>gi|354476097|ref|XP_003500261.1| PREDICTED: glycine receptor subunit beta-like isoform 1 [Cricetulus
griseus]
Length = 497
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>gi|55733419|emb|CAH93390.1| hypothetical protein [Pongo abelii]
Length = 472
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 151 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 209
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 210 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 269
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 270 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 311
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 29 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 84
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 85 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 144
Query: 286 TILYMVKF 293
+L ++
Sbjct: 145 DVLVSMRL 152
>gi|557655|emb|CAA57076.1| glycine receptor beta subunit [Mus musculus]
Length = 484
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 164 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 222
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 223 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 282
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 283 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 324
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 42 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 97
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 98 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 157
Query: 286 TILYMVKF 293
+L ++
Sbjct: 158 DVLVSMRL 165
>gi|321461577|gb|EFX72608.1| hypothetical protein DAPPUDRAFT_58889 [Daphnia pulex]
Length = 458
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 102/154 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC MN +YP D Q C+L M S TT+DL+FQW P+ V + LP+ L
Sbjct: 151 RISLTLSCPMNLKLYPLDRQTCTLSMISYGWTTEDLVFQWKQVDPVQVARNMHLPRFILE 210
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K +T C+ + +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 211 KFQTDLCNSITNTGEYSCLKVNLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDSNAVPA 270
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDA 159
RV+LGVT+LLT++TQ SLPPVSY KA +A
Sbjct: 271 RVSLGVTTLLTMATQTTGINNSLPPVSYTKANNA 304
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 218 YAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNH 277
Y+ + F + W D RL+ + + + L + +W PD FF N + F + +PN
Sbjct: 78 YSTILTFREEWLDERLKY-NDFNGKIKYLTLTDPYKVWMPDLFFSNEREGHFHDIIVPNV 136
Query: 278 YVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
YV ++ + +LY ++ ++L C +N+ L
Sbjct: 137 YVRIFPNGAVLYSIR---ISLTLSCPMNLKL 164
>gi|260835282|ref|XP_002612638.1| hypothetical protein BRAFLDRAFT_219579 [Branchiostoma floridae]
gi|229298016|gb|EEN68647.1| hypothetical protein BRAFLDRAFT_219579 [Branchiostoma floridae]
Length = 390
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 117/194 (60%), Gaps = 6/194 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL L+C MN +P D Q+C L+MES T D++ W P+ D +ELPQ +
Sbjct: 111 RLTLTLACPMNLYRFPMDRQQCGLKMESYGKTEADIMLHWKWTRPVEFDASVELPQFYVE 170
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+T Q Y+TG +T L F L+R++G+YL YIPT LIVI+SWVSFWI EAAPA
Sbjct: 171 NIRTNRTVQNYNTGQYTRLTATFDLQRQMGFYLIQVYIPTMLIVILSWVSFWINIEAAPA 230
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACT--VSSTSLTF---NDILPED 180
RV LG+T++LT++TQ +Q VSY+KA+D +++ C V + + F N + +D
Sbjct: 231 RVALGITTVLTMTTQ-GSAQGGDVKVSYVKAIDIWLAVCLLFVFAALIEFAAVNFMSRQD 289
Query: 181 PKLYDKMRPPKKEG 194
D+ R K+E
Sbjct: 290 KNRDDRRRKEKEEA 303
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKN 253
G P V + V + S+ E +M Y ++FF Q W D RL + +E L+ +
Sbjct: 15 GAPVNVTCDIFVQSMGSVKETTMDYIINVFFRQRWNDPRLSFKQ--FNETLTLDASVVGK 72
Query: 254 MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+W PD FF N K F +T N + + TILY +
Sbjct: 73 IWVPDVFFVNEKGANFHDVTTANRMLRVDPTGTILYSTRL 112
>gi|195450154|ref|XP_002072388.1| GK22351 [Drosophila willistoni]
gi|194168473|gb|EDW83374.1| GK22351 [Drosophila willistoni]
Length = 454
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 104/159 (65%), Gaps = 2/159 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG TCL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTG--TCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 273
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 274 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 312
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 184 YD-KMRPPKKEG--QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMT 240
YD ++RP G P IV ++ V + +I + M Y+ + F + W D RL+ +++
Sbjct: 46 YDARIRPSGINGTDGPAIVRINLFVRSIMTISDIKMEYSVQLTFREQWTDERLKF-DDIQ 104
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALME 300
+ L + +W PD FF N K F + +PN Y+ ++ + ++LY ++ ++L
Sbjct: 105 GRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTL 161
Query: 301 YCLVNIVL 308
C +N+ L
Sbjct: 162 ACPMNLKL 169
>gi|443691523|gb|ELT93352.1| hypothetical protein CAPTEDRAFT_163108 [Capitella teleta]
Length = 361
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 110/161 (68%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L LSC M +P D Q C + +E+ ++ + L F+W E PL + +ELPQ +LV
Sbjct: 77 RVSLVLSCPMLLQKFPLDAQVCKMNIETYAYELEQLKFKWADERPLEFNTDMELPQFELV 136
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ A+ + YSTGNF+ L V F+LKR +G+Y+ YIP+ LIVI+SWVSFW+ +A PA
Sbjct: 137 GHAIAETVKEYSTGNFSALRVNFILKRDIGFYIIQIYIPSILIVILSWVSFWLSLDAVPA 196
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
R++LGV ++LT++TQ + + LP VSY+KA+D ++S C V
Sbjct: 197 RISLGVLTVLTMTTQTSGMTSRLPRVSYIKAIDVWLSTCLV 237
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRL-LEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
M Y+ +F Q W D RL +++++E L L+ L+ +W PD FF N K F +
Sbjct: 1 MDYSLSVFLRQYWHDPRLGY-QHLSNETVLSLDYRMLERLWVPDLFFSNEKRGHFHNVMT 59
Query: 275 PNHYVWLYKDKTILY 289
PN Y+ +Y + Y
Sbjct: 60 PNTYLRIYPQGHVHY 74
>gi|390179631|ref|XP_003736946.1| GA20421, isoform F [Drosophila pseudoobscura pseudoobscura]
gi|388859928|gb|EIM53019.1| GA20421, isoform F [Drosophila pseudoobscura pseudoobscura]
Length = 422
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 104/159 (65%), Gaps = 2/159 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 124 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 183
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG TCL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 184 KFLTDYCNSKTNTG--TCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 241
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 242 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 280
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 220 ADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYV 279
+ I + W D RL+ +++ + L + +W PD FF N K F + +PN Y+
Sbjct: 53 SGINGTEQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYI 111
Query: 280 WLYKDKTILYMVKFVFMALMEYCLVNIVL 308
++ + ++LY ++ ++L C +N+ L
Sbjct: 112 RIFPNGSVLYSIR---ISLTLACPMNLKL 137
>gi|291221713|ref|XP_002730865.1| PREDICTED: glycine receptor alpha 1 subunit-like protein-like
[Saccoglossus kowalevskii]
Length = 467
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 106/160 (66%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE-LPQLQL 64
RL++K+SC M+F +P D Q C +Q+ES +T ++L+F W PE PL + E L Q +
Sbjct: 187 RLSVKVSCNMDFSRFPMDKQYCGMQLESYGYTAEELLFLWKPEGPLQMPEHTRHLQQYFV 246
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ + C ++Y TGNF+C+EV F R LGYY Y+P+ L+VI+SWVSFWI P A+P
Sbjct: 247 SETELLRCDKLYYTGNFSCIEVDFTFTRLLGYYWISYYVPSMLLVILSWVSFWINPLASP 306
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LGVT +LT++TQ + LP VSY+ A+D +M C
Sbjct: 307 ARVALGVTIVLTVTTQAISVHSILPKVSYVTAIDVWMLVC 346
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTS-- 241
YDK P EG V + ++ +D+I E +M + +F Q W D RLR E++T+
Sbjct: 81 YDKRMRPNFEGDTVRVNVDLFIIRIDNIAEVTMDFDTSMFLRQQWNDPRLRYNESITNIP 140
Query: 242 -EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
LL+ WL PD FF N K F +T N V + +LY ++
Sbjct: 141 PSGTLLDKIWL-----PDLFFFNEKDSHFHDITTDNVLVRFAGNGDVLYSMRL 188
>gi|312382617|gb|EFR28015.1| hypothetical protein AND_04645 [Anopheles darlingi]
Length = 436
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 104/165 (63%), Gaps = 6/165 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT DL+F W P+ V + + LP+ L
Sbjct: 130 RISLTLACPMNLKLYPLDRQVCSLRMASYGWTTADLVFLWKEGDPVQVVKNLHLPRFTLE 189
Query: 66 K------NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIK 119
K N + +V TG ++CL+V + KR YYL YIP C++VI+SWVSFW+
Sbjct: 190 KFLTDYCNSKTNTGKVPPTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLD 249
Query: 120 PEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
A PARV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 250 QGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 294
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 230 DHRLRLPENMTSEYRL--LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTI 287
H R+ + S RL L + +W PD FF N K F + +PN Y+ ++ ++
Sbjct: 66 GHETRIYHRLESIGRLKYLTLTEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPYGSV 125
Query: 288 LYMVKFVFMALMEYCLVNIVL 308
LY ++ ++L C +N+ L
Sbjct: 126 LYSIR---ISLTLACPMNLKL 143
>gi|382928887|gb|AFG29909.1| glutamate-gated chloride channel 4, partial [Tetranychus urticae]
Length = 471
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L C M+ +P D Q+C ++M S +TT+DL+FQW + P+ V + + LP+ L
Sbjct: 168 RISLVLFCPMDLRFFPLDKQDCEIKMASYGYTTEDLVFQWKRDDPVQVVKNLHLPRFGLS 227
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
T C+ +TG ++C+ V KR YYL Y P ++VI+SWVSFW+ P A PA
Sbjct: 228 NYVTEYCTSRTNTGEYSCIVVRLTFKREFSYYLIQIYFPCVMLVIVSWVSFWLDPNAIPA 287
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY+KA+D + +C
Sbjct: 288 RVSLGVTTLLTMATQISGINASLPPVSYIKAIDVWTESC 326
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 11/134 (8%)
Query: 175 DILPEDPKLYDKMRPPK------KEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
D + D + ++RP K+G P IV ++ V + ID+ +M YA I F + W
Sbjct: 47 DSIIGDGRYDRRIRPSGVNTTDGKDG-PAIVRVNIYVRSISRIDDVAMEYALQITFREQW 105
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
KD RL+ ++ + R L + +W+PD FF N K+ F + +PN + +Y + IL
Sbjct: 106 KDDRLQY-HDLDGKIRFLTLTDPDRIWKPDLFFSNEKSGHFHNIIMPNVLLRIYPNGEIL 164
Query: 289 YMVKFVFMALMEYC 302
Y ++ ++L+ +C
Sbjct: 165 YSIR---ISLVLFC 175
>gi|326918838|ref|XP_003205693.1| PREDICTED: glycine receptor subunit alpha-4-like, partial
[Meleagris gallopavo]
Length = 227
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 105/146 (71%), Gaps = 2/146 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + + + V E + LPQ L
Sbjct: 81 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQEAVQVAEGLTLPQFIL 140
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 141 RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 200
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLP 149
PARV LG+T++LT++TQ A S+ASLP
Sbjct: 201 PARVGLGITTVLTMTTQSAGSRASLP 226
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 211 IDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQ 270
+D+ S Y ++F Q W D RL E + L+ L ++W+PD FF N K F
Sbjct: 1 MDQFSQDYRVNVFLRQQWNDPRLAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFH 59
Query: 271 TMTIPNHYVWLYKDKTILYMVKFVFM 296
+T N + ++K+ +LY ++ +
Sbjct: 60 EVTTDNKLLRIFKNGNVLYSIRLTLI 85
>gi|326918265|ref|XP_003205410.1| PREDICTED: glycine receptor subunit beta-like [Meleagris gallopavo]
Length = 497
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 112/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ C
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIVC 336
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLLS----YDPRIRPNFKGIPVDVAVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPEN-MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K F +T N +++++D
Sbjct: 110 KWNDPRLKLPNDWRGSDTLTVDPTMFKCLWKPDLFFANEKNANFHDVTQENILLFIFRDG 169
Query: 286 TIL 288
+L
Sbjct: 170 DVL 172
>gi|118089772|ref|XP_420379.2| PREDICTED: glycine receptor subunit beta [Gallus gallus]
Length = 497
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 112/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ C
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIVC 336
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLLS----YDPRIRPNFKGIPVDVAVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPEN-MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K F +T N +++++D
Sbjct: 110 KWNDPRLKLPNDWRGSDTLTVDPTMFKCLWKPDLFFANEKNANFHDVTQENILLFIFRDG 169
Query: 286 TIL 288
+L
Sbjct: 170 DVL 172
>gi|449276068|gb|EMC84760.1| Glycine receptor subunit beta [Columba livia]
Length = 497
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 112/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ C
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIVC 336
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLLS----YDPRIRPNFKGIPVDVAVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPEN-MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K F +T N +++++D
Sbjct: 110 KWNDPRLKLPNDWRGSDTLTVDPTMFKCLWKPDLFFANEKNANFHDVTQENILLFIFRDG 169
Query: 286 TIL 288
+L
Sbjct: 170 DVL 172
>gi|224049673|ref|XP_002198711.1| PREDICTED: glycine receptor subunit beta isoform 1 [Taeniopygia
guttata]
Length = 497
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 112/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ C
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIVC 336
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLLS----YDPRIRPNFKGIPVDVAVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPEN-MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K F +T N +++++D
Sbjct: 110 KWNDPRLKLPNDWRGSDTLTVDPTMFKCLWKPDLFFANEKNANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>gi|348511845|ref|XP_003443454.1| PREDICTED: glycine receptor subunit beta-like [Oreochromis
niloticus]
Length = 496
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ+C +Q+ES +TTDDL F W P+ +D I LPQ +
Sbjct: 175 RLSITLSCPLDLTLFPMDTQKCKMQLESFGYTTDDLQFMWQTGDPVQMDA-IALPQFDIR 233
Query: 66 KNKT--ADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ +C++ Y+ TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 234 QEDITYGNCTKYYAGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 293
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+LS++ + LP VSY+KA+D ++ AC
Sbjct: 294 SAARVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWLIAC 335
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVEDRVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKT 286
W D RL+LP++ S+ ++ K +W+PD FF N K+ F +T N ++++++
Sbjct: 110 RWNDPRLKLPDDFKSDSLTVDPKMFKCLWKPDLFFANEKSANFHDVTQENILLFIFRNGD 169
Query: 287 ILYMVKF 293
+L ++
Sbjct: 170 VLISMRL 176
>gi|444908119|emb|CCN97896.1| glutamate-gated chloride channel 6, partial [Ostertagia ostertagi]
Length = 446
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 109/166 (65%), Gaps = 3/166 (1%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLA--VDEKIE 58
M SE RL+L LSC M YP D Q+C L + S + TTDD++++W+ + P+ V
Sbjct: 161 MYSE-RLSLTLSCPMYLHKYPMDEQKCRLLLASYAFTTDDIVYRWEEQNPIQYHVQLNTS 219
Query: 59 LPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWI 118
LP L + DC+ +TG ++C++ +F +KR +Y+ Y+P+ L+V++SWVSFW+
Sbjct: 220 LPNFSLASAEIGDCTSSTTTGEYSCIQTMFTMKRMFRFYVAQIYLPSTLLVVVSWVSFWL 279
Query: 119 KPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ A PARVTLGVT+LLT++TQ A SLPPVSY+KAVD ++ C
Sbjct: 280 ERTAVPARVTLGVTTLLTMTTQAAAINNSLPPVSYIKAVDVWIGTC 325
>gi|291223316|ref|XP_002731656.1| PREDICTED: glycine receptor, alpha 2-like [Saccoglossus
kowalevskii]
Length = 488
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 108/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAV-DEKIELPQLQL 64
R++L L C M+F +P D Q+C L++ES +TT DL+F W P +E ++LPQ +L
Sbjct: 163 RISLSLHCEMDFHRFPMDKQQCGLEVESFRYTTKDLMFNWIETEPAEFKNENLKLPQFEL 222
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ +C++V +GN+TC+ + F++ R LGYYL TYIP+ L+ ++SWVSFWI +++P
Sbjct: 223 EGLRITECTRVLISGNYTCIGLEFLMNRELGYYLLQTYIPSILLTVISWVSFWIDIKSSP 282
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
+RV LG+TS+LT+ T + LP VSY+KA+D + C V
Sbjct: 283 SRVALGITSVLTMITALNGVRGDLPHVSYIKAIDVWFCMCLV 324
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 8/151 (5%)
Query: 144 SQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYDK-MRPPKKEGQPTIVYFH 202
Q P+ + D + T F+DIL YDK +RP P
Sbjct: 21 GQGGDNPIGRTQRADGWADTQKELETIALFDDILVN----YDKRIRPGYGSNSPVRNTVQ 76
Query: 203 VTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFK 262
+ + DS++E MTY+ I+ Q W D RL ++ VD +W PD F
Sbjct: 77 IYLASFDSLEETKMTYSITIYLRQQWNDPRLAYDDSRELPSNNYLVD---KIWVPDLMFG 133
Query: 263 NAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+ + + +T+ N +V + + T+ Y +
Sbjct: 134 HERKAVYHELTVQNRFVNIDSNGTVQYNARI 164
>gi|325297032|ref|NP_001191520.1| GluClAc2 [Aplysia californica]
gi|253918125|gb|ACT37244.1| GluClAc2 [Aplysia californica]
Length = 429
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 111/160 (69%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC M YP D Q+C + + S +TT+++I++W P+ + ++L Q LV
Sbjct: 165 RLSVLLSCHMKLQKYPLDVQKCPILIASYGYTTENIIYRWIDHKPIDYQDNLQLSQYTLV 224
Query: 66 KNKTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+C++ Y TG+F+C+ F+LKR +G+Y+ Y+P+ LIVI+SWVSFW+ EA P
Sbjct: 225 GESLDNCTKTYKETGSFSCVRADFILKRDVGFYIIQVYVPSVLIVILSWVSFWLDIEAIP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
AR++LGV ++LT++TQ + +++SLP VSY+KA+D +M+ C
Sbjct: 285 ARISLGVLTVLTMTTQSSGARSSLPRVSYVKAIDVWMATC 324
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 163 ACTVSSTSLTFNDILPEDPKLYD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAAD 221
A +V+ T +IL + Y+ ++ P ++ T V + V+ +D+++E SM Y+
Sbjct: 35 AASVNMTRQDVLEILIVNSSTYNARIAPDYEQDHATTVDVQIYVLSIDTVNEQSMDYSLH 94
Query: 222 IFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWL 281
I+ Q W D RL+ + + L+ + +W PD+FF+N K F +T+PN + L
Sbjct: 95 IYLRQRWVDPRLQFMNYSRAVWLELDAKLMSKVWVPDTFFRNEKKGEFHIVTVPNRLMHL 154
Query: 282 YKDKTILYMVKF 293
Y++ TI Y ++
Sbjct: 155 YRNGTIYYSMRL 166
>gi|406856378|gb|AFS64115.1| glycine receptor subunit beta, partial [Haplochromis burtoni]
Length = 251
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 112/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ +D I LPQ +
Sbjct: 77 RLSVTLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLQFMWQTGDPVQMD-AIALPQFDIR 135
Query: 66 KNKT--ADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ +C++ Y+ TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 136 QEDITYGNCTKYYAGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 195
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+LS++ + LP VSY+KA+D ++ AC
Sbjct: 196 SAARVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWLIAC 237
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M Y +IF Q W D RL+LP++ S+ ++ K +W+PD FF N K+ F +T
Sbjct: 1 MDYRVNIFLRQRWNDPRLKLPDDFKSDSLTVDPKMFKCLWKPDLFFANEKSANFHDVTQE 60
Query: 276 NHYVWLYKDKTIL 288
N ++++++ +L
Sbjct: 61 NILLFIFRNGDVL 73
>gi|436874448|gb|JAA65055.1| GLC-3 [Oesophagostomum dentatum]
Length = 531
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M+ YP D Q C + + S ++T +D+ ++W + P+ + + + LP Q
Sbjct: 225 RISLVLSCPMHLQYYPMDVQTCLIDLASYAYTDNDIEYRWKEKDPVQLKDGLNSSLPSFQ 284
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L K T C+ +TG ++CL I L+R+ YYL YIP+C++VI+SWVSFW+ A
Sbjct: 285 LNKVTTTYCTSKTNTGTYSCLRTILELRRQFSYYLLQLYIPSCMLVIVSWVSFWLDRTAV 344
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ AC
Sbjct: 345 PARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGAC 385
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 182 KLYD-KMRPP------KKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL- 233
K YD ++RPP K P +V ++ + + ID+ +M Y+ + F ++W D RL
Sbjct: 108 KGYDWRVRPPGINLTAKGSHGPVVVNVNMLIRSISKIDDVNMEYSVQLTFRESWVDGRLA 167
Query: 234 -RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
LP + ++ +L + +W PDSFF+N K + PN + ++KD ILY V+
Sbjct: 168 YGLPGDNKPDFLILTAG--QQIWMPDSFFQNEKQAQKHMIDKPNVLIRVHKDGQILYSVR 225
Query: 293 FVFM 296
+
Sbjct: 226 ISLV 229
>gi|332225999|ref|XP_003262176.1| PREDICTED: glycine receptor subunit alpha-4 [Nomascus leucogenys]
Length = 342
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 106/148 (71%), Gaps = 2/148 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPV 151
PARV LG+T++LT++TQ + S+ASLP V
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKV 312
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y ++F Q W D RL E +
Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFSSVTETTMDYRVNVFLRQQWNDPRLSYRE-YPDDS 116
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L+ L ++W+PD FF N K F +T N + ++K+ +LY ++ +
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 169
>gi|157713474|gb|ABV68895.1| putative glutamate gated chloride channel subunit [Haemonchus
contortus]
Length = 439
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 109/166 (65%), Gaps = 3/166 (1%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLA--VDEKIE 58
M SE RL+L LSC M YP D Q C + + S + TTDD+++QW+ + P+ V
Sbjct: 161 MYSE-RLSLTLSCPMYLHKYPMDEQYCQMLLASYAFTTDDIVYQWEEQNPIQYHVLLNTS 219
Query: 59 LPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWI 118
LP L +T +C+ +TG ++CL+V+F +KR +YL Y+P+ L+V++SWVSFW+
Sbjct: 220 LPNFLLNAAETGECTSSTTTGEYSCLKVMFTMKRMFRFYLAQIYLPSTLLVVVSWVSFWL 279
Query: 119 KPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
A PARVTLGVT+LLT++TQ A SLPPVSY+KAVD ++ C
Sbjct: 280 DRTAVPARVTLGVTTLLTMTTQAAAINNSLPPVSYIKAVDVWIGVC 325
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 184 YDK-MRPPKKEGQ----PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL----R 234
YD+ +RPP ++ + P +V + + + +ID M Y + F Q W+D RL
Sbjct: 50 YDRRIRPPNRDSKGVNGPVMVKVNAYIRSISNIDFVRMQYNLQVTFRQLWQDSRLAYQNS 109
Query: 235 LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
P + ++ ++ L +W PD+FF N K + N + +Y + +++Y
Sbjct: 110 FPNDKVPKFIIITEKDL--IWTPDTFFLNEKQAHRHEIDKLNLLLRIYSNGSVMY 162
>gi|26351769|dbj|BAC39521.1| unnamed protein product [Mus musculus]
Length = 343
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 106/148 (71%), Gaps = 2/148 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 164 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFIL 223
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 224 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 283
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPV 151
PARV LG+T++LT++TQ + S+ASLP V
Sbjct: 284 PARVGLGITTVLTMTTQSSGSRASLPKV 311
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + L S+ E +M Y ++F Q W D RL E +
Sbjct: 57 YDARIRPNFKGPPVNVTCNIFINSLGSVTETTMDYRVNVFLRQQWNDPRLAYRE-YPDDS 115
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L+ L ++W+PD FF N K F +T N + ++K+ +LY ++ +
Sbjct: 116 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 168
>gi|260817112|ref|XP_002603431.1| hypothetical protein BRAFLDRAFT_222595 [Branchiostoma floridae]
gi|229288750|gb|EEN59442.1| hypothetical protein BRAFLDRAFT_222595 [Branchiostoma floridae]
Length = 390
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 115/161 (71%), Gaps = 3/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
+ T L+C MNF +YP D+QECS+++ES SH+T D++ +W DP + LA D I+LP+ ++
Sbjct: 111 KYTALLACPMNFQLYPMDSQECSIKIESFSHSTKDIVLEWADPPIILADD--IQLPEYKV 168
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ C V G F+CLE F + RR+GYY+ TYIP+ LIVI+SW++FWI PE AP
Sbjct: 169 LSTTPERCDAVRRIGTFSCLEGRFRMVRRMGYYIIQTYIPSILIVILSWLTFWISPEIAP 228
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACT 165
ARV LG+T++LT +T A +++++P SY++A+D ++ AC+
Sbjct: 229 ARVALGITTVLTSTTFTAINRSTMPRFSYVRAIDIWLLACS 269
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPENMT 240
YD+ P G P V F + ++ + S+ E+SM Y +F Q W D R N+T
Sbjct: 5 YDQRLRPDFRGGPVTVTFQLYILTMGSVSESSMDYVVTVFLRQQWNDPRFVYTGFDGNLT 64
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L + ++W PD FF N KA F + T + + ++ + +L+ K+
Sbjct: 65 -----LYDTVIDDVWLPDVFFVNEKAAGFASSTGSSRMMRIHPNGDVLFSTKY 112
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 18/114 (15%)
Query: 293 FVFMALMEYCLVNIVL------GDSDLPK--------PPEPAKQ----DKIFELAAKENA 334
F+F AL+E+ V+ + G S + PPE ++ +F ENA
Sbjct: 271 FIFAALVEFAAVHFLFKRHKKFGFSGRLRRFLGIEQTPPEGVEEYVTCGSLFFKIRLENA 330
Query: 335 RLLTGQPMIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+P H + L + RA ID SR+ FP++F I N YW +F
Sbjct: 331 EPKPAEPTEEEKHHRTLAELKALYQKRARRIDFASRILFPLVFCIFNIVYWGIF 384
>gi|30089002|gb|AAP13536.1| avermectin-sensitive chloride channel GluCl alpha/yellow
fluorescent protein fusion [synthetic construct]
Length = 702
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 101/161 (62%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M YP D Q+CS+ + S ++TT D+ + W PL + + LP Q
Sbjct: 184 RISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQ 243
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ V +TG ++CL LKR +YL YIP+C++VI+SWVSFW A
Sbjct: 244 LTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAI 303
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++ Q A + LPPVSY+KA+D ++ AC
Sbjct: 304 PARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDVWIGAC 344
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++RPP G P +V ++ + + ID +M Y+A + ++W D RL +
Sbjct: 75 YDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESWIDKRLSYGVKGDGQ 134
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+ + +W PD+FF N K T+ PN + ++ D T+LY V+
Sbjct: 135 PDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVR 184
>gi|17559548|ref|NP_507090.1| Protein GLC-1 [Caenorhabditis elegans]
gi|559559|gb|AAA50785.1| avermectin-sensitive glutamate-gated chloride channel GluCl alpha
[Caenorhabditis elegans]
gi|6434277|emb|CAB07361.2| Protein GLC-1 [Caenorhabditis elegans]
gi|28883187|gb|AAO34106.1| avermectin-sensitive glutamate-gated chloride channel GluCl alpha
[synthetic construct]
gi|1091780|prf||2021414A Glu-gated Cl channel:ISOTYPE=alpha
Length = 461
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 101/161 (62%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M YP D Q+CS+ + S ++TT D+ + W PL + + LP Q
Sbjct: 184 RISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQ 243
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ V +TG ++CL LKR +YL YIP+C++VI+SWVSFW A
Sbjct: 244 LTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAI 303
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++ Q A + LPPVSY+KA+D ++ AC
Sbjct: 304 PARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDVWIGAC 344
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++RPP G P +V ++ + + ID +M Y+A + ++W D RL +
Sbjct: 75 YDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESWIDKRLSYGVKGDGQ 134
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+ + +W PD+FF N K T+ PN + ++ D T+LY V+
Sbjct: 135 PDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRI 185
>gi|149642619|ref|NP_001092519.1| glycine receptor subunit alpha-4 precursor [Bos taurus]
gi|148744917|gb|AAI42202.1| MGC139528 protein [Bos taurus]
gi|296470974|tpg|DAA13089.1| TPA: hypothetical protein LOC531678 [Bos taurus]
Length = 342
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 106/148 (71%), Gaps = 2/148 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPV 151
PARV LG+T++LT++TQ + S+ASLP V
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKV 312
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y ++F Q W D RL E +
Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYRE-YPDDS 116
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L+ L ++W+PD FF N K F +T N + ++K+ +LY ++ +
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 169
>gi|118403926|ref|NP_001072255.1| glycine receptor, beta precursor [Xenopus (Silurana) tropicalis]
gi|111305488|gb|AAI21238.1| glycine receptor, beta [Xenopus (Silurana) tropicalis]
Length = 497
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 111/162 (68%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQM-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 TEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAQELPKVSYVKAIDVWLIAC 336
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 152 SYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSI 211
S L A D ++ +STS N +L YD P +G P V ++ + SI
Sbjct: 41 SQLSAED--LARVPANSTSNILNRLLVS----YDPRVRPNFKGIPVDVVVNIFINSFGSI 94
Query: 212 DENSMTYAADIFFAQTWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQ 270
E +M Y +IF Q W D RL+LP + S+ ++ K +W+PD FF N K F
Sbjct: 95 QETTMDYRVNIFLRQRWNDPRLKLPNDFRGSDALTVDPTMFKCLWKPDLFFANEKNANFH 154
Query: 271 TMTIPNHYVWLYKDKTILYMVKF 293
+T N +++++D +L ++
Sbjct: 155 DVTQENILLFIFRDGDVLLSMRL 177
>gi|12002197|gb|AAG43232.1|AF119791_1 glutamate-gated chloride channel [Haemonchus contortus]
Length = 435
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 103/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RLTL LSC M + YP D Q C + S ++TT D+ + W E P+ + + + LP
Sbjct: 157 RLTLTLSCPMRLVDYPLDVQTCVVDFASYAYTTKDIEYGWKEEKPIQIKDGLRQSLPSFL 216
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L KT +C+ V +TG ++CL I LKR YYL YIP+ ++V +SWVSFW+ ++
Sbjct: 217 LSNVKTGNCTSVTNTGAYSCLRTIIELKREFSYYLLQLYIPSFMLVAVSWVSFWLDKDSV 276
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A+LPPVSY KA+D ++ C
Sbjct: 277 PARVTLGVTTLLTMTTQASGVNANLPPVSYTKAIDIWIGVC 317
>gi|443695509|gb|ELT96399.1| hypothetical protein CAPTEDRAFT_94740, partial [Capitella teleta]
Length = 293
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 105/160 (65%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+ LSC M +P D Q+C +++ES S+ DL+ WD E P+ + + + LPQ L+
Sbjct: 96 RVLQTLSCPMELTAFPFDRQKCDMKLESYSYEAHDLLLIWDEETPIDISDDLYLPQYNLI 155
Query: 66 K-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
K + CS+ Y G + CL F L+R G+YL YIP+ IVI+SW+SFWI PEA P
Sbjct: 156 KFDVRTLCSKNYRNGIYECLRATFWLERLYGFYLLQDYIPSVFIVILSWLSFWISPEAVP 215
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
AR++LGVT++LT++TQ + S+ S P VSY KA+D +++AC
Sbjct: 216 ARISLGVTTVLTMATQLSGSKGSNPKVSYPKAIDIWLTAC 255
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKN 253
G+ V ++ V L S+DE +M + F Q+W D R + + +R V+ +
Sbjct: 1 GEAVTVTCNLDVTSLSSVDEVNMQFDVGFFLRQSWVDKRAKHSADGPLIFREENVN---S 57
Query: 254 MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+W+PD+F N KA PN + +Y + TI Y ++
Sbjct: 58 IWKPDTFLSNEKAGPSTLHLFPNDMMKVYPNGTIAYSMR 96
>gi|333944538|pdb|3RHW|A Chain A, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
gi|333944539|pdb|3RHW|B Chain B, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
gi|333944540|pdb|3RHW|C Chain C, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
gi|333944541|pdb|3RHW|D Chain D, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
gi|333944542|pdb|3RHW|E Chain E, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
gi|333944553|pdb|3RI5|A Chain A, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
gi|333944554|pdb|3RI5|B Chain B, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
gi|333944555|pdb|3RI5|C Chain C, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
gi|333944556|pdb|3RI5|D Chain D, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
gi|333944557|pdb|3RI5|E Chain E, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
gi|333944568|pdb|3RIA|A Chain A, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
gi|333944569|pdb|3RIA|B Chain B, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
gi|333944570|pdb|3RIA|C Chain C, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
gi|333944571|pdb|3RIA|D Chain D, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
gi|333944572|pdb|3RIA|E Chain E, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
gi|333944583|pdb|3RIF|A Chain A, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
gi|333944584|pdb|3RIF|B Chain B, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
gi|333944585|pdb|3RIF|C Chain C, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
gi|333944586|pdb|3RIF|D Chain D, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
gi|333944587|pdb|3RIF|E Chain E, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate
Length = 347
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 101/161 (62%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M YP D Q+CS+ + S ++TT D+ + W PL + + LP Q
Sbjct: 123 RISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQ 182
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ V +TG ++CL LKR +YL YIP+C++VI+SWVSFW A
Sbjct: 183 LTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAI 242
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++ Q A + LPPVSY+KA+D ++ AC
Sbjct: 243 PARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDVWIGAC 283
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR--LPENMT 240
YD ++RPP G P +V ++ + + ID +M Y+A + ++W D RL + +
Sbjct: 14 YDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESWIDKRLSYGVKGDGQ 73
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
++ +L V +W PD+FF N K T+ PN + ++ D T+LY V+
Sbjct: 74 PDFVILTVG--HQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVR 123
>gi|405975540|gb|EKC40099.1| Glycine receptor subunit alpha-2 [Crassostrea gigas]
Length = 431
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 105/160 (65%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L SC MN YP D+Q CSL ++S ++T + F W P P+ + +ELPQ LV
Sbjct: 174 RVSLTASCPMNLQKYPMDSQRCSLYLQSFAYTRKTIDFVWKPIKPVVASKTMELPQFTLV 233
Query: 66 K-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
N C + +FTC++V F LKR G+Y+ YIPT +IV++SWVSFW+ +A P
Sbjct: 234 NVNTRNSCDENIGGPDFTCIQVDFNLKRNTGFYMIQIYIPTIMIVLLSWVSFWLSIDAVP 293
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
AR++LG+ ++LT++TQ + +SLP VSY+KA+D +M+ C
Sbjct: 294 ARISLGILTVLTMTTQKGAAISSLPRVSYVKAIDVWMAVC 333
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKE-GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQT 227
T++ D + + YD PP E + T V + V +DSI E SM + + F Q
Sbjct: 50 TAIHITDFIQAMFEEYDSSLPPNFESNESTKVNMSLYVNSIDSISEQSMDFTINAFIEQE 109
Query: 228 WKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTI 287
W D RL + EY L+ ++ +W PD +F N K F +T+PN + LY + I
Sbjct: 110 WCDPRLIFYGMIMDEYFELDSKFMVRVWVPDLYFTNEKRANFHVVTVPNKMLHLYNNGCI 169
Query: 288 LYMVKFVFMALMEYCLVNI 306
Y ++ ++L C +N+
Sbjct: 170 KYRLR---VSLTASCPMNL 185
>gi|260817108|ref|XP_002603429.1| hypothetical protein BRAFLDRAFT_222514 [Branchiostoma floridae]
gi|229288748|gb|EEN59440.1| hypothetical protein BRAFLDRAFT_222514 [Branchiostoma floridae]
Length = 402
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 102/159 (64%), Gaps = 1/159 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+ T+ L C MNF ++P DTQ C+LQ ES SHT DL+ WD E P+ + IELP+ L
Sbjct: 111 KYTMLLKCRMNFEMFPMDTQVCTLQTESYSHTDKDLLLIWD-ENPVVLSGDIELPEYILR 169
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ C G FTCLE F L RRLG+YL +YIP+ +I ++SW++FWI PE APA
Sbjct: 170 GKRYTTCDNDRDIGTFTCLEAQFKLVRRLGFYLLSSYIPSIMITVLSWLTFWISPEIAPA 229
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV LG+T++LT + ++ ++P SY++A+D +M C
Sbjct: 230 RVALGITTVLTSTALFGVNRQTMPRFSYIRAMDIWMMVC 268
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 9/175 (5%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTS 241
K YD+ P +G P ++ + V L S+ +M Y +F Q W D RL+ + +
Sbjct: 3 KKYDERVRPDFKGPPVKIFCQLVVNNLGSVKAETMDYIVTVFMRQRWIDSRLQHYD--YN 60
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEY 301
+ +L L +W PD FF N KA F + T N + +Y + +LY K+ ++
Sbjct: 61 DTIILSSRNLDRVWLPDIFFVNEKAAGFISTTGNNKMLRIYPNGEVLYSEKY---TMLLK 117
Query: 302 CLVNIVLGDSDLP----KPPEPAKQDKIFELAAKENARLLTGQPMIPPNHQQAQR 352
C +N + D + + DK L EN +L+G +P + +R
Sbjct: 118 CRMNFEMFPMDTQVCTLQTESYSHTDKDLLLIWDENPVVLSGDIELPEYILRGKR 172
>gi|288683407|ref|NP_001165756.1| glycine receptor subunit alpha-4 isoform 2 precursor [Homo sapiens]
Length = 342
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 105/148 (70%), Gaps = 2/148 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCLMDLKNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTADC-SQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C ++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPV 151
PARV LG+T++LT++TQ + S+ASLP V
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKV 312
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI + +M Y ++F Q W D RL E +
Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFSSITKTTMDYRVNVFLRQQWNDPRLSYRE-YPDDS 116
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
L+ L ++W+PD FF N K F +T N + ++K+ +LY ++ + L+ CL
Sbjct: 117 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR---LTLILSCL 173
Query: 304 VNI 306
+++
Sbjct: 174 MDL 176
>gi|4234776|gb|AAD13405.1| putative glutamate-gated chloride channel alpha subunit [Haemonchus
contortus]
Length = 435
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 103/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RLTL LSC M YP D Q C + S ++TT D+ + W E P+ + + + LP
Sbjct: 157 RLTLTLSCPMRLADYPLDVQTCVVDFASYAYTTKDIEYGWKEEKPIQIKDGLRQSLPSFL 216
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L KT++C+ V +TG ++CL I LKR YYL YIP+ ++V +SWVSFW+ ++
Sbjct: 217 LSNVKTSNCTSVTNTGAYSCLRTIIELKREFSYYLLQLYIPSFMLVAVSWVSFWLDKDSV 276
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A+LPPVSY KA+D ++ C
Sbjct: 277 PARVTLGVTTLLTMTTQASGVNANLPPVSYTKAIDIWIGVC 317
>gi|12002199|gb|AAG43233.1|AF119792_1 glutamate-gated chloride channel [Haemonchus contortus]
gi|7799047|emb|CAA10355.2| glutamate-gated chloride channel subunit [Haemonchus contortus]
Length = 435
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RLTL LSC M YP D Q C + S ++TT D+ + W E P+ + + + LP
Sbjct: 157 RLTLTLSCPMRLADYPLDVQTCVVDFASYAYTTKDIEYGWKEEKPIQIKDGLRQSLPSFL 216
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L KT +C+ V +TG ++CL I LKR YYL YIP+ ++V +SWVSFW+ ++
Sbjct: 217 LSNVKTGNCTSVTNTGAYSCLRTIIELKREFSYYLLQLYIPSFMLVAVSWVSFWLDKDSV 276
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A+LPPVSY KA+D ++ C
Sbjct: 277 PARVTLGVTTLLTMTTQASGVNANLPPVSYTKAIDIWIGVC 317
>gi|332254999|ref|XP_003276623.1| PREDICTED: glycine receptor subunit alpha-1 [Nomascus leucogenys]
Length = 364
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 104/148 (70%), Gaps = 1/148 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVS 152
ARV LG+T++LT++TQ + S+ASLP S
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKGS 306
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E +
Sbjct: 52 YDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNE-YPDDS 110
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 111 LDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
>gi|402870878|ref|XP_003899424.1| PREDICTED: glycine receptor subunit alpha-3-like [Papio anubis]
Length = 297
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/134 (53%), Positives = 100/134 (74%), Gaps = 1/134 (0%)
Query: 32 ESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLVKNKTAD-CSQVYSTGNFTCLEVIFVL 90
S+ +T +DLIF+W E P+ V E + LPQ L + K C++ Y+TG FTC+EV F L
Sbjct: 23 RSVGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHL 82
Query: 91 KRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPP 150
+R++GYYL YIP+ LIVI+SWVSFWI +AAPARV LG+T++LT++TQ + S+ASLP
Sbjct: 83 ERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPK 142
Query: 151 VSYLKAVDAFMSAC 164
VSY+KA+D +M+ C
Sbjct: 143 VSYVKAIDIWMAVC 156
>gi|260790997|ref|XP_002590527.1| hypothetical protein BRAFLDRAFT_59628 [Branchiostoma floridae]
gi|229275721|gb|EEN46538.1| hypothetical protein BRAFLDRAFT_59628 [Branchiostoma floridae]
Length = 347
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 120/195 (61%), Gaps = 7/195 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
RL+LKLSC M+ +P D Q C +Q+ES S+TT D++ W PL + ++ LP L
Sbjct: 101 RLSLKLSCYMHLRSFPADKQYCKMQIESYSYTTQDMVLGWITTRAPLEISREVHLPDFDL 160
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
C+ YSTG+F C++ F+L+RR+GY+L Y+P+ LIVI+SWVSFWI E+AP
Sbjct: 161 SIADVKSCTAGYSTGDFPCIKADFLLERRIGYFLIQIYLPSILIVIISWVSFWIHSESAP 220
Query: 125 ARVTLGVTSLL-TLSTQHAKSQASLPPVSYLKAVDAFMSACT--VSSTSLTF---NDILP 178
ARV L +T++L + ++A++P VSY+ +D +M+AC V + L + N I
Sbjct: 221 ARVALAITTVLTLTTHSATTTRAAMPRVSYITDMDIWMAACQTFVFAALLEYAIVNHISR 280
Query: 179 EDPKLYDKMRPPKKE 193
+D +L K+R KK
Sbjct: 281 QDKRLMKKLRHKKKN 295
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKN 253
G P V +V + +DS++E +M Y I+ Q W+D RL E + L+ +
Sbjct: 5 GPPVEVIANVYISSMDSVEEKTMDYTVGIYLRQFWQDPRLVF-EGLNKTIS-LDSNIRPK 62
Query: 254 MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+W PD FF N K +T N Y+ ++ + T+LY ++
Sbjct: 63 IWVPDLFFVNEKDGKMHAITTANKYIRIHPNGTVLYSMRL 102
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 19/101 (18%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARLLTGQPMIPPNHQQAQR 352
FVF AL+EY +VN + ++QDK + +L + P + R
Sbjct: 264 FVFAALLEYAIVNHI------------SRQDK------RLMKKLRHKKKNDPCSGDAELR 305
Query: 353 NLAQR-ARTRAINIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
A+R A R+ +DR SRV FP+ F I N YW+ L
Sbjct: 306 LEAKRLAIRRSHAVDRASRVVFPLAFLIFNLFYWLYLYRIL 346
>gi|432118041|gb|ELK37978.1| Gamma-aminobutyric acid receptor subunit alpha-5 [Myotis davidii]
Length = 484
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 159/312 (50%), Gaps = 27/312 (8%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVD---EKIELPQ 61
RLT+ C M +P D CSL+ S ++T++++ + W D +D + L Q
Sbjct: 161 RLTISADCPMQLYNFPMDEHTCSLKFGSYAYTSEEITYVWLDTNATNGLDVAEDGSRLTQ 220
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L +T S S GNFT L F LKR+LGY+L TY+P + VI+S VSFW+ E
Sbjct: 221 YYLTGFETHSGSCSTSVGNFTVLTADFHLKRKLGYFLTQTYLPCIMTVILSQVSFWVNRE 280
Query: 122 AAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACT--VSSTSLTFN--DIL 177
+ PAR GVT++LT++T ++ LP VSY ++D F++ C V S + F +
Sbjct: 281 SVPARTVFGVTTVLTMTTLSISARNMLPKVSYATSMDWFIAVCHGFVFSALIEFAIVNYF 340
Query: 178 PEDPKLYDK--------------MRPPKKEG---QPTIVYFHVTVMGLDSIDENSMTYAA 220
+ +D RPP ++G +PT++ + V + + +M Y
Sbjct: 341 TKRSWAWDGQGDAGRNRNMAALTQRPPGRDGVAVRPTVIDVDIYVNSIGPVSSINMEYQI 400
Query: 221 DIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVW 280
DIFFAQTW D RLR N T + L + + +W PD+ F+N+K +T PN +
Sbjct: 401 DIFFAQTWTDSRLRF--NSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLR 458
Query: 281 LYKDKTILYMVK 292
++ D ILY ++
Sbjct: 459 IWNDGKILYTLR 470
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P T+V + V + + + M Y D+FF Q+W D RL+
Sbjct: 55 YDKRLRPGFGEWTTVVNTDILVTSIGPVSDTQMEYTIDVFFRQSWNDERLQFE----GPI 110
Query: 244 RLLEVDWL--KNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
R L ++ + +W PD++F N+K T PN + L D T+LY ++ A
Sbjct: 111 RSLSLNNMMAGKIWTPDTYFHNSKKSVVHNTTTPNKLLRLESDGTLLYTMRLTISA 166
>gi|344265669|ref|XP_003404905.1| PREDICTED: glycine receptor subunit alpha-1 [Loxodonta africana]
Length = 457
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 103/145 (71%), Gaps = 1/145 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 208 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 267
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 268 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 327
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLP 149
ARV LG+T++LT++TQ + S+ASLP
Sbjct: 328 ARVGLGITTVLTMTTQSSGSRASLP 352
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 2/141 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K VDA SA S S F D L YD P +G P V ++ + SI E
Sbjct: 73 KEVDAARSAPKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 131
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 132 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 190
Query: 275 PNHYVWLYKDKTILYMVKFVF 295
N + + ++ +LY ++
Sbjct: 191 DNKLLRISRNGNVLYSIRITL 211
>gi|443689089|gb|ELT91578.1| hypothetical protein CAPTEDRAFT_4404 [Capitella teleta]
Length = 343
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 97/159 (61%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ L C MN YP DTQ C L + S S+ D+ +W + + + LPQ L
Sbjct: 116 RLSMALQCEMNLAAYPMDTQTCDLTLSSFSYDESDVTLEWSKVNAVVLSRNMSLPQFTLQ 175
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
T C + G F+C+ V F L+R GYYL Y+PT +VI+SWVSFWI +A PA
Sbjct: 176 NYGTDKCVDNHLIGEFSCMRVTFNLRRTFGYYLLQIYMPTAFVVILSWVSFWINKDAVPA 235
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
R++LGVT++LT++TQ + S A+ P VSY KA+D +M+ C
Sbjct: 236 RISLGVTTVLTMTTQLSSSTANAPKVSYAKALDIWMTTC 274
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 193 EGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLK 252
+G PT V + + +DE +M Y DIF Q W D R+R T + +
Sbjct: 19 DGPPTTVDITIFINFFGKLDEINMEYHMDIFLRQMWYDDRMRY-RGATGPITFVGST-ID 76
Query: 253 NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNI 306
+W+PD+FF NAK PN + + + T+LY V+ MAL C +N+
Sbjct: 77 AIWKPDTFFPNAKHAEIHGGLSPNRLLKGFPNGTVLYTVRLS-MALQ--CEMNL 127
>gi|436874458|gb|JAA65060.1| AVR-14 [Oesophagostomum dentatum]
Length = 464
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RLTL LSC M YP D Q C + S ++TT D+ + W E P+ + + + LP
Sbjct: 157 RLTLTLSCPMKLADYPLDVQTCVVDFASYAYTTKDIEYIWKEEKPIQIKDGLRQSLPSFL 216
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L +T +C+ V +TG ++CL I LKR YYL YIP+ ++V +SWVSFW+ ++
Sbjct: 217 LSNVRTGNCTSVTNTGAYSCLRTIIELKREFSYYLLQLYIPSFMLVAVSWVSFWLDKDSV 276
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A+LPPVSY KA+D ++ C
Sbjct: 277 PARVTLGVTTLLTMTTQASGVNANLPPVSYTKAIDIWIGVC 317
>gi|268557864|ref|XP_002636922.1| C. briggsae CBR-GLC-3 protein [Caenorhabditis briggsae]
Length = 485
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 104/161 (64%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R+++ LSC M+ YP D Q C + + S ++TT+D+ +QW + P+ + + LP Q
Sbjct: 154 RISMVLSCPMHLQYYPMDVQTCLIDLASYAYTTNDIEYQWKKDKPVQLKNGLHSSLPSFQ 213
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL I L+R+ YYL YIP+ ++VI+SWVSFW+ A
Sbjct: 214 LNNVYTDLCTSKTNTGTYSCLRTILELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAV 273
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ AC
Sbjct: 274 PARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGAC 314
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 182 KLYD-KMRPPK------KEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL- 233
K YD ++RPP IV ++ + + ID+ +M Y+ + F + W D RL
Sbjct: 37 KGYDWRVRPPGINLTIPGTHGAVIVTVNMLIRSISKIDDVNMEYSVQLTFREEWVDGRLA 96
Query: 234 -RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
LP + T + +L + +W PDSFF+N K + PN + +++D ILY V+
Sbjct: 97 YGLPGDDTPPFLILTAG--QQIWMPDSFFQNEKQAHKHDIDKPNVLIRIHRDGLILYSVR 154
Query: 293 F 293
Sbjct: 155 I 155
>gi|260833178|ref|XP_002611534.1| hypothetical protein BRAFLDRAFT_117187 [Branchiostoma floridae]
gi|229296905|gb|EEN67544.1| hypothetical protein BRAFLDRAFT_117187 [Branchiostoma floridae]
Length = 3145
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 102/159 (64%), Gaps = 1/159 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+ T+ L C MNF ++P DTQ C+LQ ES SHT DL+ WD E P+ + IELP+ L
Sbjct: 2931 KYTMLLKCRMNFEMFPMDTQVCTLQTESYSHTDKDLLLIWD-ENPVVLSGDIELPEYILR 2989
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ C G FTCLE F L RRLG+YL +YIP+ +I ++SW++FWI PE APA
Sbjct: 2990 GKRYTTCDNDRDIGTFTCLEAQFKLVRRLGFYLLSSYIPSIMITVLSWLTFWISPEIAPA 3049
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV LG+T++LT + ++ ++P SY++A+D +M C
Sbjct: 3050 RVALGITTVLTSTALFGVNRQTMPRFSYIRAMDIWMMVC 3088
>gi|47223922|emb|CAG06099.1| unnamed protein product [Tetraodon nigroviridis]
Length = 521
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 113/196 (57%), Gaps = 37/196 (18%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQM-------------------ESLS----------- 35
RLTL LSC M+ +P D Q C +Q +SL
Sbjct: 140 RLTLTLSCPMDLKNFPMDVQTCIMQYGEHRGLFLNLVSISGWTMDDSLGALTGILAFLNV 199
Query: 36 ------HTTDDLIFQWDPEMPLAVDEKIELPQLQLVKNKTAD-CSQVYSTGNFTCLEVIF 88
+T +DLIF+W P+ V E + LPQ L C++ Y+TG FTC+EV F
Sbjct: 200 FNVFCRYTMNDLIFEWQENGPVQVAEGLTLPQFILKDESDLRYCTKHYNTGKFTCIEVRF 259
Query: 89 VLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASL 148
L+R++GYYL YIP+ LIVI+SWVSFWI +AAPARV LG+T++LT++TQ + S+ SL
Sbjct: 260 HLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRTSL 319
Query: 149 PPVSYLKAVDAFMSAC 164
P VSY+KA+D +M+ C
Sbjct: 320 PKVSYVKAIDIWMAVC 335
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 1/141 (0%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +D + V + F D L YD P +G P V ++ + SI E
Sbjct: 4 KEIDNAARSRQVPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 63
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 64 TMDYRVNIFLRQQWNDPRLAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEVTT 122
Query: 275 PNHYVWLYKDKTILYMVKFVF 295
N + ++K+ +LY ++
Sbjct: 123 DNKLLRIFKNGNVLYSIRLTL 143
>gi|291235943|ref|XP_002737898.1| PREDICTED: glycine receptor alpha 4 subunit-like protein-like
[Saccoglossus kowalevskii]
Length = 464
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 107/161 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL+L LSC M +P D Q C +Q+E +TT D+ W +A D ++++ Q L
Sbjct: 150 RLSLTLSCHMTLEDFPMDRQFCGIQIEPYGYTTKDIELYWQDSNAVAWDPELKMAQYVLE 209
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ ++ Q YSTG F + V+FVL R+LG+Y+ TYIP+ L+V++SWVSFWI AAPA
Sbjct: 210 GSDLSERIQDYSTGFFGHVNVVFVLTRQLGFYVLQTYIPSILLVVLSWVSFWIDVTAAPA 269
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV LG+T++LTL+TQ + ++ LP V+Y KA+D +M+AC V
Sbjct: 270 RVALGITTVLTLTTQGSGVRSELPKVAYAKAIDIWMAACLV 310
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD+ P +G P VY + + DSI E +M YA ++F Q W D RL + +E
Sbjct: 45 YDRRIRPNSKGNPVKVYVDMFITSFDSIRETTMDYAVTMYFRQHWNDTRLAFND---TET 101
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
++ + + W PD FF N K F +T N + ++ ILY V+
Sbjct: 102 IVVTDNVRERFWVPDLFFVNVKRANFHYVTRDNVFFRVHPTGLILYSVRL 151
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 359 RTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+ RA+ ID+ SR+ FP F I NC YW ++
Sbjct: 432 KNRALRIDKLSRIIFPTSFLIFNCLYWPLY 461
>gi|156368051|ref|XP_001627510.1| predicted protein [Nematostella vectensis]
gi|156214422|gb|EDO35410.1| predicted protein [Nematostella vectensis]
Length = 319
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 111/165 (67%), Gaps = 4/165 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM----PLAVDEKIELPQ 61
RLT+ SC ++ +PHDTQ CSL +ES + + D+++ W+ + + + + +ELPQ
Sbjct: 141 RLTITTSCRLDLRDFPHDTQSCSLSLESYGYQSTDVLYVWNERLDNTSAIYIHDDLELPQ 200
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
+++ + Y+ GN + L F +KRR+GY+L TYIP+ +IVI+SW+SFWI PE
Sbjct: 201 FEVLGVSRSAKMNKYNIGNHSSLVANFRMKRRIGYFLIDTYIPSTIIVIISWISFWIDPE 260
Query: 122 AAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
APARV LG+T++LT++T + ++A+LP VSY+KA+D ++ C +
Sbjct: 261 TAPARVALGITTVLTMTTLISSARANLPKVSYVKAIDWYLLLCLI 305
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD+ P +G+P +VY + V + ++ E +M + DI+ Q W+D RL+
Sbjct: 33 YDRRIRPGSKGEPVVVYVDMYVSNIWAMQEMNMDFTIDIYLRQYWRDERLQFETQTPGAM 92
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L D K +W P ++F K F +T N+ + + D ++ Y ++
Sbjct: 93 LTLSSDINKQIWVPSTYFLATKKAYFHDVTTDNYLLQVKPDGSLFYSIRL 142
>gi|78771903|gb|AAR19751.2| glutamate-gated chloride channel A [Haemonchus contortus]
Length = 435
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RLTL LSC M YP D Q C + S ++TT D+ + W E P+ + + + LP
Sbjct: 157 RLTLTLSCPMRLADYPLDVQTCVVDFASYAYTTKDIEYGWKEEKPIQIKDGLRQSLPSFL 216
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L KT++C+ V +TG ++CL I LKR YYL YIP+ ++V +SWVSFW+ ++
Sbjct: 217 LSNVKTSNCTSVTNTGAYSCLRTIIELKREFSYYLLQLYIPSFMLVAVSWVSFWLDKDSV 276
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A+LPPVSY KA+ ++ C
Sbjct: 277 PARVTLGVTTLLTMTTQASGVNANLPPVSYTKAIGIWIGVC 317
>gi|78771904|gb|ABB51214.1| glutamate-gated chloride channel B [Haemonchus contortus]
Length = 366
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RLTL LSC M YP D Q C + S ++TT D+ + W E P+ + + + LP
Sbjct: 88 RLTLTLSCPMRLADYPLDVQTCVVDFASYAYTTKDIEYGWKEEKPIQIKDGLRQSLPSFL 147
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L KT++C+ V +TG ++CL I LKR YYL YIP+ ++V +SWVSFW+ ++
Sbjct: 148 LSNVKTSNCTSVTNTGAYSCLRTIIELKREFSYYLLQLYIPSFMLVAVSWVSFWLDKDSV 207
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A+LPPVSY KA+ ++ C
Sbjct: 208 PARVTLGVTTLLTMTTQASGVNANLPPVSYTKAIGIWIGVC 248
>gi|391346291|ref|XP_003747411.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
[Metaseiulus occidentalis]
Length = 499
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 108/166 (65%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D Q C++++ES +T D+++ W P+ + ELP
Sbjct: 161 ITYGMRFTTTLACMMDLHYYPLDAQNCTVEIESYGYTVDEVVMYWKQPNPVGGVDSSELP 220
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q +V+++T D + +TG + L + F LKR +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 221 QFSIVRHETTDRKESLATGTYQRLSLSFELKRNIGYFIFQTYLPSILIVMLSWVSFWINH 280
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 281 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 326
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 175 DILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR 234
DIL YD P G+P + + + DSI E +M Y ++ Q W D RL
Sbjct: 48 DILKNILNGYDIRLRPNFGGKPLYIGMDLLIASFDSISEVNMDYTITLYLNQYWVDERLA 107
Query: 235 LPENMTSEYRL-LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+ + L L D+ + +W PD+FF N K +T N V L D I Y ++F
Sbjct: 108 FSSSEQNSQELTLSGDFAEKIWVPDTFFANDKNSFLHDVTEKNKMVRLKSDGHITYGMRF 167
>gi|405958856|gb|EKC24941.1| Glycine receptor subunit alpha-2 [Crassostrea gigas]
Length = 454
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 101/159 (63%), Gaps = 1/159 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+T SC M YP D Q CS+QMES ++TD L FQW+ ++PL + LPQ +
Sbjct: 146 RVTGTFSCQMYLQKYPLDQQTCSMQMESFGYSTDTLTFQWN-DVPLLTKPNLTLPQFSIG 204
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
C YS FTCL + + R GYY+ Y+P+ LIV +SWVSFW+ +A PA
Sbjct: 205 HVTNHTCDITYSNVTFTCLGIDIEMSRSYGYYIIQVYVPSFLIVCLSWVSFWLNIDAVPA 264
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
R++LG+ ++LT++TQ + ++A+LP VSY+KA+D +M+ C
Sbjct: 265 RISLGLLTVLTMTTQSSGARATLPRVSYIKAIDVWMATC 303
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F+ IL ED YD PP +G P + + ++G+DSI +++M F Q W D R
Sbjct: 33 FDVILNED---YDPRIPPMHDGNPVLNTIQLYILGIDSISDSTM---MSFFLRQRWYDDR 86
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E L+ + +W PD + KN K +T+PN + LY D ++Y ++
Sbjct: 87 LAYAERFNFSKVELDNRVMSKVWIPDLYIKNEKKSEVHAVTVPNKLMHLYPDGLVVYSMR 146
>gi|291223032|ref|XP_002731516.1| PREDICTED: glycine receptor, alpha 1-like [Saccoglossus
kowalevskii]
Length = 837
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 109/161 (67%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+++ LSC+M+ +P D Q C +Q+E+ +TT D+I QWD P+ V + +ELPQ L
Sbjct: 153 RVSVTLSCSMHLHKFPMDKQSCGMQIETFGYTTKDVIIQWDETNPVYVAKDLELPQFSLG 212
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ C Y G++ CL+++F L R L YY+ TY P+ L+VI+SWVSFW+ +A PA
Sbjct: 213 ITNVSRCYTNYPLGDYGCLQIVFPLHRELTYYILETYAPSALLVILSWVSFWMHIDATPA 272
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
R +LG+T++LTL+T + ++ +LP VSY KA+D +M+ C++
Sbjct: 273 RASLGITTVLTLTTLSSGARDALPKVSYTKAIDVWMAGCSL 313
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 97/160 (60%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R +L L C M +P D Q C + +ES +TT D++ QW P + + + + +P L
Sbjct: 546 RASLTLICYMYLQRFPMDQQNCGIDLESFGYTTRDVMLQWHPNHSVILPQLV-MPGFSLS 604
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
T+ Q Y G ++ L +F L+R L +Y+ Y+P+ L+VI+SWVSFW+ +A PA
Sbjct: 605 VPDTSAIIQEYPMGQYSRLHCMFNLERELIFYIMEHYVPSFLLVILSWVSFWLSVDATPA 664
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACT 165
R +LG+T++LTL+T + ++ LP VSY KA+D +M C+
Sbjct: 665 RASLGITTVLTLTTLSSGARVELPKVSYTKAIDVWMVVCS 704
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 159 AFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY 218
+F++ C + + F+D + YD P G P +V V + L S+ E +M Y
Sbjct: 24 SFLAPCENNDLNSMFSD---NRWRSYDHRLRPNFMGSPVVVTCFVWISSLHSVSEITMDY 80
Query: 219 AADIFFAQTWKDHRLRLPENMTSEYRL-LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNH 277
+F + W D RL N T L + + + N+W PD +F N K F T+T+ N
Sbjct: 81 GVTMFLIERWTDPRLEF--NGTEAIDLHSQSNLIDNIWTPDLYFVNEKEGRFHTVTVDNK 138
Query: 278 YVWLYKDKTILYMVK 292
+ +Y + TI+Y ++
Sbjct: 139 QIRIYPNGTIIYDIR 153
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G + ++ + + SI E SM Y +F Q W D RL + + +
Sbjct: 439 YDNQIRPNVTGPAISISVYMLLTSIHSISEISMDYGVTMFLTQEWIDPRLSFNGSDSVDL 498
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
R + ++W PD +F N K +T+ N + +Y + ++Y ++
Sbjct: 499 RSGS-ELEASLWTPDLYFVNVKKGELHEVTMTNKQIRVYPNGQVIYDIR 546
>gi|443687136|gb|ELT90208.1| hypothetical protein CAPTEDRAFT_34060, partial [Capitella teleta]
Length = 438
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 111/163 (68%), Gaps = 2/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAVDEKIELPQLQ 63
RLT+ C M+ +P DTQ CSL++ES ++ D+ ++W+ P +++D++++LPQ
Sbjct: 119 RLTVTSVCRMDLTYFPMDTQICSLEIESYGYSVKDIKYRWNDGPSHSVSIDDEVQLPQFN 178
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ ++ ++ +Q STGN++ L F R LGYY+ Y+P+ LIV++SWVSFW+ EA
Sbjct: 179 VRGHRASERTQKLSTGNYSRLSCEFFFVRSLGYYIIQIYVPSTLIVVLSWVSFWLSREAV 238
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
PARV LG+T++LT++T + + A+LP +SYLK++D ++ C V
Sbjct: 239 PARVALGITTVLTMTTLISSTNAALPKISYLKSIDVYLVTCFV 281
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTS 241
K YDK P +G P V + V + SI E M + D +F Q W D RLR +
Sbjct: 11 KGYDKRLRPNYKGSPVEVGITMYVSSVSSISEVDMDFTLDFYFRQMWNDPRLRF--DPKE 68
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
E + + L +W PD+FF AK F T N ++ + +L ++ ++
Sbjct: 69 EELCISNEMLAKIWWPDTFFATAKDAKFHIATTKNAFLRIKPSGDVLQSLRLTVTSV 125
>gi|312082386|ref|XP_003143423.1| hypothetical protein LOAG_07842 [Loa loa]
Length = 310
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 104/161 (64%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M+ YP D Q C + + S ++TTDD+ + W+ + P+ + + + LP Q
Sbjct: 134 RISLVLSCPMHLQYYPMDIQTCLIDLASYAYTTDDIEYVWESKDPVQLKDGLHSSLPSFQ 193
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL ++ L+R+ YYL Y P+ ++VI+SWVSFW+ A
Sbjct: 194 LSNVTTTFCTSKTNTGTYSCLRIVLELRRQFSYYLLQLYAPSLMLVIVSWVSFWLDRTAV 253
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+ LT++TQ + A LPPVSY KA+D ++ AC
Sbjct: 254 PARVTLGVTTFLTMTTQASGINAKLPPVSYTKAIDVWIGAC 294
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 182 KLYD-KMRPPKKE------GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR 234
K YD ++RPP P +V ++ + + ID+ +M Y+ + F ++W D RL
Sbjct: 17 KGYDWRVRPPGTNLSITGGHGPVVVAVNMLIRSISKIDDVNMEYSVQLTFRESWVDGRLA 76
Query: 235 L--PENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
P + T ++ +L + +W PDSFF+N K + PN + ++KD TILY V+
Sbjct: 77 FGYPRDNTPDFVILTTG--QQIWMPDSFFQNEKHAQRHMIDKPNVLIRIHKDGTILYSVR 134
Query: 293 F 293
Sbjct: 135 I 135
>gi|432109690|gb|ELK33766.1| Glycine receptor subunit alpha-2 [Myotis davidii]
Length = 423
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 104/151 (68%), Gaps = 7/151 (4%)
Query: 21 PHDTQECSLQME------SLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLVKNKTAD-CS 73
P + E S Q + +T +DLIF+W + P+ V E + LPQ L + K C+
Sbjct: 145 PQNAPEASSQPRIVGTGLGVGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEEKELGYCT 204
Query: 74 QVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTS 133
+ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAPARV LG+T+
Sbjct: 205 KHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITT 264
Query: 134 LLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 265 VLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 295
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y +IF Q W D RL E +
Sbjct: 7 YDARIRPNFKGPPVNVTCNIFINSFGSVAETTMDYRVNIFLRQQWNDSRLAYSE-YPDDS 65
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L+ L ++W+PD FF N K F +T N + + K+ +LY +++ FM
Sbjct: 66 LDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRWTFM 118
>gi|324518631|gb|ADY47159.1| Glutamate-gated chloride channel, partial [Ascaris suum]
Length = 349
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 103/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M+ YP D Q C + + S ++T DD+ + W P+ + + + LP Q
Sbjct: 154 RISLVLSCPMHLQYYPMDIQTCLIDLASYAYTMDDIEYVWKSTDPVQLKDGLHSSLPSFQ 213
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL + L+R+ GYYL Y+P+ ++VI+SWVSFW+ A
Sbjct: 214 LNNVTTTYCTSKTNTGTYSCLRTVLELRRQFGYYLLQLYVPSTMLVIVSWVSFWLDRTAV 273
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR+TLGVT+LLT++TQ + A LPPVSY KA+D ++ AC
Sbjct: 274 PARITLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIEAC 314
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 182 KLYD-KMRPPK------KEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL- 233
K YD ++RPP P +V ++ + + ID+ +M Y+ + F ++W D RL
Sbjct: 37 KGYDWRVRPPGTNLSLPGSHGPVVVSVNMLIRSISKIDDVNMEYSVQLTFRESWVDGRLA 96
Query: 234 -RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
LP + E+ +L + +W PDSFF+N K + PN + ++KD TILY V+
Sbjct: 97 YGLPRDNKPEFLILTAG--QQIWMPDSFFQNEKQAQKHMIDKPNVLIRVHKDGTILYSVR 154
Query: 293 F 293
Sbjct: 155 I 155
>gi|149032230|gb|EDL87136.1| rCG59207 [Rattus norvegicus]
Length = 269
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 70/127 (55%), Positives = 96/127 (75%), Gaps = 1/127 (0%)
Query: 39 DDLIFQWDPEMPLAVDEKIELPQLQLVKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYY 97
+DLIF+W E P+ V E + LPQ L + K C++ Y+TG FTC+EV F L+R++GYY
Sbjct: 2 NDLIFEWQDEAPVQVAEGLTLPQFLLKEEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYY 61
Query: 98 LFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAV 157
L YIP+ LIVI+SWVSFWI +AAPARV LG+T++LT++TQ + S+ASLP VSY+KA+
Sbjct: 62 LIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAI 121
Query: 158 DAFMSAC 164
D +M+ C
Sbjct: 122 DIWMAVC 128
>gi|429467299|gb|AFZ85292.1| glutamate-gated chloride channel subunit alpha 4, partial
[Cyathostomum catinatum]
Length = 379
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 104/161 (64%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M+ YP D Q C + + S ++T +D+ ++W + P+ + + + LP Q
Sbjct: 77 RISLVLSCPMHLQYYPMDVQTCLIDLASYAYTDNDIEYRWKEKDPVQLKDGLNSSLPSFQ 136
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL + L+R+ YYL YIP+ ++VI+SWVSFW+ A
Sbjct: 137 LNNVSTTYCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIPSSMLVIVSWVSFWLDRTAV 196
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ AC
Sbjct: 197 PARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGAC 237
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 216 MTYAADIFFAQTWKDHRL--RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMT 273
M Y+ + F ++W D RL LP + ++ +L + +W PDSFF+N K +
Sbjct: 1 MEYSVQLTFRESWVDGRLAYGLPGDNKPDFLILTAG--QQIWMPDSFFQNEKQAQKHMID 58
Query: 274 IPNHYVWLYKDKTILYMVKF 293
PN + ++KD ILY V+
Sbjct: 59 KPNVLIRVHKDGQILYSVRI 78
>gi|313230256|emb|CBY07960.1| unnamed protein product [Oikopleura dioica]
Length = 3051
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 115/176 (65%), Gaps = 20/176 (11%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQ------------MESLSHTTDDLIFQWDPEMPLAV 53
R+TL L+C M+ +I+P D Q+C+++ +ES + DLIF W + +
Sbjct: 1967 RITLTLACYMDLLIFPMDLQQCNIERKPRQFSFFLFLVESFGYDKRDLIFVWQETNAIQL 2026
Query: 54 DEKIELPQL-----QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLI 108
+ + LPQ +VK A+C +VY+TG FTCL+ I VLKR +GYYL Y+P+ LI
Sbjct: 2027 SKTLALPQFSIKGYHIVK---ANCDKVYNTGTFTCLKGILVLKREMGYYLIQLYVPSLLI 2083
Query: 109 VIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
V++SWVSFWI EAAPAR LG+T++LT++TQ + + +SLP VSY+KA+D +MS C
Sbjct: 2084 VVLSWVSFWINIEAAPARTALGITTVLTITTQTSGASSSLPKVSYIKAIDIWMSFC 2139
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 185 DKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYR 244
+K+RP K+ +P+ + ++ V +DSI E +M Y ++F W D RLR +
Sbjct: 1861 NKIRPNDKQ-RPSNISINIFVNSMDSIAETTMDYRLNVFLRMRWNDPRLRYEGLFDEDSL 1919
Query: 245 LLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVF 295
++ LK W PD FF N K F +T N V +YK+ I ++
Sbjct: 1920 VVHPSILKRFWLPDLFFANEKKANFHKVTQDNKLVRVYKNGDIYVSIRITL 1970
>gi|53854311|gb|AAU95605.1| glutamate gated chloride channel alpha subunit [Cylicocyclus
nassatus]
Length = 439
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 104/161 (64%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R+++ LSC M+ YP D Q C + + S ++T +D+ ++W + P+ + + + LP Q
Sbjct: 134 RISMVLSCPMHLQYYPMDVQTCLIDLASYAYTDNDIEYRWKEKDPVQLKDGLNSSLPSFQ 193
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL + L+R+ YYL YIP+ ++VI+SWVSFW+ A
Sbjct: 194 LNNVSTTYCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIPSSMLVIVSWVSFWLDRTAV 253
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ AC
Sbjct: 254 PARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGAC 294
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 182 KLYD-KMRPP------KKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL- 233
K YD ++RPP K P +V ++ + + I + +M Y+ + F ++W D RL
Sbjct: 17 KGYDWRVRPPGINLTAKGSHGPVVVSVNMLIRSISKIGDVNMEYSVQLGFRESWVDGRLA 76
Query: 234 -RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
LP + ++ +L + +W PDSFF+N K + PN + ++KD ILY V+
Sbjct: 77 YGLPGDNKPDFLILTAG--QQIWMPDSFFQNEKQAQKHMIDKPNVLIRVHKDGQILYSVR 134
Query: 293 F 293
Sbjct: 135 I 135
>gi|241680536|ref|XP_002411566.1| Gaba-gated chloride channel, putative [Ixodes scapularis]
gi|215504301|gb|EEC13795.1| Gaba-gated chloride channel, putative [Ixodes scapularis]
Length = 405
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 111/167 (66%), Gaps = 2/167 (1%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIEL 59
+T R T L+C M+ YP D+Q C++++ES +T D++ W DPE P+ E+ EL
Sbjct: 70 ITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMFWKDPE-PVVGVEQSEL 128
Query: 60 PQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIK 119
PQ +++ +T D + +TG + L + F LKR +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 129 PQFSIMRYETTDRKEKLATGTYQRLSLSFELKRNIGYFIFQTYLPSILIVMLSWVSFWIN 188
Query: 120 PEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 189 HEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 235
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRL-LEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
M Y ++ Q W+D RL + +Y L L D+ + +W PD+FF N K +T
Sbjct: 1 MDYTITLYLNQYWRDERLTFSKE---KYELTLSGDFAEKIWVPDTFFANDKNSFLHDVTE 57
Query: 275 PNHYVWLYKDKTILYMVKF 293
N V L D I Y ++F
Sbjct: 58 KNKMVRLQSDGHITYGMRF 76
>gi|34481590|emb|CAE46430.1| glutamate-gated chloride channel alpha3B subunit [Dirofilaria
immitis]
Length = 427
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 104/161 (64%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TTDD+ ++W + P+ E + LP +
Sbjct: 159 RLSLVLSCPMSLEYYPLDRQTCLIDLASYAYTTDDIKYEWKLKNPIQQKEGLRQSLPSFE 218
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++C V+ +L+R YYL YIP ++V++SWVSFW+ +A
Sbjct: 219 LQDVLTDYCTSKTNTGEYSCARVMLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAV 278
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV+LGVT+LLT++TQ + A LPPVSY+KAVD ++ C
Sbjct: 279 PARVSLGVTTLLTMTTQASGINAKLPPVSYIKAVDVWIGVC 319
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 165 TVSSTSLTFNDILPEDPKLYD-KMRPPKKE------GQPTIVYFHVTVMGLDSIDENSMT 217
V+ L +I+ K YD ++RP G P +V ++ + + ID+ +M
Sbjct: 16 VVAKKKLKEQEIIQRTLKDYDWRVRPRGSNLSWPDTGGPVLVSVNIYLRSISKIDDVNME 75
Query: 218 YAADIFFAQTWKDHRL---RLPENMTS--EYRLL----EVDWLKNMWRPDSFFKNAKAVT 268
Y+A F + W D RL RL + T + +L + D + +W PD+FF+N K
Sbjct: 76 YSAQFTFREEWHDARLAYERLADENTQVPPFVVLAASEQADLTQQIWMPDTFFQNEKEAR 135
Query: 269 FQTMTIPNHYVWLYKDKTILYMVKF 293
+ PN + ++ D ILY V+
Sbjct: 136 RHLIDKPNVLIRIHPDGQILYSVRL 160
>gi|260803217|ref|XP_002596487.1| hypothetical protein BRAFLDRAFT_243656 [Branchiostoma floridae]
gi|229281744|gb|EEN52499.1| hypothetical protein BRAFLDRAFT_243656 [Branchiostoma floridae]
Length = 307
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD-EKIELPQLQL 64
RLT SC M +YP D Q C+LQ E+ +TT+DL++ W E +ELP L
Sbjct: 120 RLTTTASCWMKMHMYPLDAQNCTLQFETYGYTTEDLVYYWLWGFESVRGFENVELPHFDL 179
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
T + + Y+TG F+ L V FV++R +GY++ TY+P+CL+V +SWVSFWI P+A+
Sbjct: 180 GGYDTHETAAQYTTGQFSGLAVSFVIRRNMGYFISETYLPSCLVVAVSWVSFWISPDASA 239
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+ ++LT++ A + LP +SY+KA+D ++ C +
Sbjct: 240 ARVLLGIMTVLTMTNLDATVRQGLPKISYVKAIDVYLVGCLI 281
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G P V + V+ +DSI + +M Y Q W D RL +
Sbjct: 12 YDLRIRPNFRGAPVKVGVVIDVISIDSISDVNMEYTVSYDIRQFWVDERLDFRHLYDGDK 71
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
E + +WRPD+F KN + F +TI + ++K+ +++Y ++
Sbjct: 72 MTFEGETTLRIWRPDTFIKNGRGSRFHDVTIGQQLMHIFKNGSVIYKLR 120
>gi|260796705|ref|XP_002593345.1| hypothetical protein BRAFLDRAFT_206516 [Branchiostoma floridae]
gi|229278569|gb|EEN49356.1| hypothetical protein BRAFLDRAFT_206516 [Branchiostoma floridae]
Length = 390
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 108/159 (67%), Gaps = 1/159 (0%)
Query: 8 TLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLVKN 67
T+ SC M F +YP D+Q C+ Q+ S +TT DLI +W+ E + + IELP+ +
Sbjct: 120 TVIGSCPMQFHMYPFDSQTCTFQIASYGYTTKDLIIEWE-EPAVEFNPVIELPEYVIAGW 178
Query: 68 KTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARV 127
+ DC+ Y+ G+F+C+EV F L R+LGYYL TY+P+ LIV +SW++FWI P APARV
Sbjct: 179 TSRDCTGNYTIGSFSCIEVKFKLVRQLGYYLIQTYVPSILIVCLSWLTFWISPNQAPARV 238
Query: 128 TLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
LG+T++LT +T S++SLP SY++A+D +M CT+
Sbjct: 239 ALGITTVLTATTLTTVSRSSLPKFSYIRAIDIWMLVCTI 277
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G+PT+V + + L S E M Y + Q W D R P+ M
Sbjct: 12 YDGRVRPDFGGKPTVVQVQLYIASLGSFSEIKMDYVMTFYLRQWWNDPRFEFPD-MNQNI 70
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L VD ++W P +F N K F+ T +W++ I Y K
Sbjct: 71 ELHNVD-SSDIWTPSIYFVNEKDAGFRPSTDHAKALWIWPSGDIFYGEK 118
>gi|429467305|gb|AFZ85295.1| glutamate-gated chloride channel subunit alpha 4, partial
[Cylicostephanus goldi]
Length = 380
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 103/160 (64%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE-LPQLQL 64
R++L LSC M+ YP D Q C + + S ++T +D+ ++W + P+ + + + LP QL
Sbjct: 77 RISLVLSCPMHLQYYPMDVQTCLIDLASYAYTDNDIEYRWKEKDPVQLKDGLNSLPSFQL 136
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
T C+ +TG +CL + L+R+ YYL YIP+ ++VI+SWVSFW+ A P
Sbjct: 137 NNVSTTYCTSKTNTGTHSCLRTVLELRRQFSYYLLQLYIPSSMLVIVSWVSFWLDRTAVP 196
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ AC
Sbjct: 197 ARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGAC 236
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 216 MTYAADIFFAQTWKDHRL--RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMT 273
M Y+ + F ++W D RL LP + ++ +L + +W PDSFF+N K +
Sbjct: 1 MEYSVQLTFRESWVDGRLAYGLPGDNKPDFLILTAG--QQIWMPDSFFQNEKQAQKHMID 58
Query: 274 IPNHYVWLYKDKTILYMVKF 293
PN + ++KD +LY V+
Sbjct: 59 KPNVLIRVHKDGQVLYSVRI 78
>gi|71980440|ref|NP_001020962.1| Protein AVR-14, isoform a [Caenorhabditis elegans]
gi|351065346|emb|CCD61323.1| Protein AVR-14, isoform a [Caenorhabditis elegans]
Length = 416
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 103/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TT D+ ++W + P+ + + LP +
Sbjct: 163 RLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKEKKPIQQKDGLRQSLPSFE 222
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ + +TG ++CL VL+R YYL YIP+ ++VI+SWVSFW+ ++
Sbjct: 223 LQDVVTDYCTSLTNTGEYSCLRTRMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSV 282
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ C
Sbjct: 283 PARVTLGVTTLLTMTTQSSGINAKLPPVSYTKAIDVWIGVC 323
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPENMTSE---YRLL- 246
G P +V ++ + + ID+ +M Y+A F + W D RL R E+ +E + +L
Sbjct: 55 GGPVLVTVNIYLRSISKIDDVNMEYSAQFTFREEWTDQRLAYERYEESGDTEVPPFVVLA 114
Query: 247 ---EVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
D + +W PD+FF+N K + PN + ++K+ ILY V+
Sbjct: 115 TSENADQSQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRL 164
>gi|34481588|emb|CAE46429.1| glutamate-gated chloride channel alpha3A subunit [Dirofilaria
immitis]
Length = 419
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 103/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TTDD+ ++W + P+ E + LP +
Sbjct: 159 RLSLVLSCPMSLEYYPLDRQTCLIDLASYAYTTDDIKYEWKLKNPIQQKEGLRQSLPSFE 218
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL +L+R YYL YIP+ ++VI+SWVSFW+ ++
Sbjct: 219 LQDVLTDYCTSKTNTGEYSCLRTKMILRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSV 278
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ C
Sbjct: 279 PARVTLGVTTLLTMTTQSSGINAKLPPVSYTKAIDVWIGVC 319
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 16/144 (11%)
Query: 166 VSSTSLTFNDILPEDPKLYD-KMRPPKKE------GQPTIVYFHVTVMGLDSIDENSMTY 218
V+ L +I+ K YD ++RP G P +V ++ + + ID+ +M Y
Sbjct: 17 VAKKKLKEQEIIQRTLKDYDWRVRPRGSNLSWPDTGGPVLVSVNIYLRSISKIDDVNMEY 76
Query: 219 AADIFFAQTWKDHRL---RLPENMTS--EYRLL----EVDWLKNMWRPDSFFKNAKAVTF 269
+A F + W D RL RL + T + +L + D + +W PD+FF N K
Sbjct: 77 SAQFTFREEWHDARLAYERLADENTQVPPFVVLAASEQADLTQQIWMPDTFFPNEKEARR 136
Query: 270 QTMTIPNHYVWLYKDKTILYMVKF 293
+ PN + ++ D ILY V+
Sbjct: 137 HLIDKPNVLIRIHPDGQILYSVRL 160
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 42/98 (42%)
Query: 291 VKFVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARLLTGQPMIPPNHQQA 350
+ F+F AL+E+ LVN + +K + ++ + M P
Sbjct: 320 LAFIFGALLEFALVNYAARKDITTRHRMLSKYASHMDYSSGYQPLVSATTAMPPSRSWLC 379
Query: 351 QRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
R +R + R+ ID SR+ FP+ +A N YW ++
Sbjct: 380 FRLFVRRYKERSKRIDVVSRLVFPIGYACFNVLYWAVY 417
>gi|313747947|gb|ADR74384.1| putative glutamate-gated chloride channel [Brugia malayi]
Length = 419
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 103/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TTDD+ ++W + P+ E + LP +
Sbjct: 159 RLSLVLSCPMSLEYYPLDRQTCLIDLASYAYTTDDIKYEWKLKNPIQQKEGLRQSLPSFE 218
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL +L+R YYL YIP+ ++VI+SWVSFW+ ++
Sbjct: 219 LQDVLTDYCTSKTNTGEYSCLRTKMILRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSV 278
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ C
Sbjct: 279 PARVTLGVTTLLTMTTQSSGINAKLPPVSYTKAIDVWIGVC 319
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 166 VSSTSLTFNDILPEDPKLYD-KMRPPKKE------GQPTIVYFHVTVMGLDSIDENSMTY 218
++ L +I+ K YD ++RP G P +V ++ + + ID+ +M Y
Sbjct: 17 MAKKKLKEQEIIQRTLKDYDWRVRPRGSNLSWPDTGGPVLVSVNIYLRSISKIDDVNMEY 76
Query: 219 AADIFFAQTWKDHRL---RLPENMTS--EYRLL----EVDWLKNMWRPDSFFKNAKAVTF 269
+A F + W D RL RL + T + +L + D + +W PD+FF+N K
Sbjct: 77 SAQFTFREEWNDARLAYERLADENTQVPPFVVLAASEQADLTQQIWMPDTFFQNEKEARR 136
Query: 270 QTMTIPNHYVWLYKDKTILYMVKF 293
+ PN + ++ D ILY V+
Sbjct: 137 HLIDKPNVLIRIHPDGQILYSVRL 160
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 44/105 (41%)
Query: 284 DKTILYMVKFVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARLLTGQPMI 343
D I + F+F AL+E+ LVN +K + ++ + T M
Sbjct: 313 DVWIGVCLAFIFGALLEFALVNYAARKDVNAGHRMLSKYANHMDYSSGYQPLVSTTAIMT 372
Query: 344 PPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
P R +R + R+ ID SR+ FP+ +A N YW ++
Sbjct: 373 PTRSWWCLRPFVRRYKERSKRIDVVSRLVFPIGYACFNVLYWAVY 417
>gi|324508899|gb|ADY43751.1| Glutamate-gated chloride channel [Ascaris suum]
Length = 292
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 105/164 (64%), Gaps = 2/164 (1%)
Query: 3 SEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LP 60
+++RL+L LSC M+ YP D Q C + + S ++TTDD+ ++W P+ E + LP
Sbjct: 6 NDFRLSLVLSCPMSLEYYPLDRQTCLIDLASYAYTTDDIKYEWKLTNPIQQKEGLRQSLP 65
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
+L T C+ +TG ++CL +L+R YYL YIP+ ++VI+SWVSFW+
Sbjct: 66 SFELQDVLTDYCTSKTNTGEYSCLRTKMILRREFSYYLLQLYIPSFMLVIVSWVSFWLDK 125
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
++ PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ C
Sbjct: 126 DSVPARVTLGVTTLLTMTTQSSGINAKLPPVSYTKAIDVWIGVC 169
>gi|328715292|ref|XP_001943367.2| PREDICTED: glycine receptor subunit beta-type 4-like [Acyrthosiphon
pisum]
Length = 343
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 103/160 (64%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL L SC M+ +P D Q C++++ S S T ++L +W P+ + + + +PQ ++V
Sbjct: 76 RLKLTFSCMMDLSKFPLDNQICTMEVASFSKTIEELRLEWKNTDPVLMAKGLRMPQFEIV 135
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+DC + + GN++CL F L R +G++L +Y+PT LIV++SWVSFW+ ++ P
Sbjct: 136 DIVPSDCQESFQIGNYSCLVAQFYLSRSVGFHLVQSYLPTMLIVVISWVSFWMDVDSVPG 195
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACT 165
R TLGVT+LL + +Q + Q+ LP VSY+KA+D +M CT
Sbjct: 196 RTTLGVTTLLAVGSQSSGIQSGLPQVSYVKAIDVWMGTCT 235
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M Y D++ Q W+D RL+ +++T L + + +K +W+P+ +F NAK FQ +T+P
Sbjct: 1 MDYEVDLYLRQKWQDARLQ-HKDITESLDLNDPNLVKAIWKPEVYFPNAKHAEFQFVTVP 59
Query: 276 NHYVWLYKDKTILYM--VKFVFMALME 300
N + + D ILYM +K F +M+
Sbjct: 60 NVLIRIKPDGDILYMLRLKLTFSCMMD 86
>gi|393907851|gb|EJD74807.1| CBR-AVR-14 protein [Loa loa]
Length = 610
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 103/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TTDD+ ++W P+ E + LP +
Sbjct: 159 RLSLVLSCPMSLEYYPLDRQTCLIDLASYAYTTDDIKYEWKLTNPIQQKEGLRQSLPSFE 218
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL +L+R YYL YIP+ ++VI+SWVSFW+ ++
Sbjct: 219 LQDVLTDYCTSKTNTGEYSCLRTKMILRREFSYYLVQLYIPSLMLVIVSWVSFWLDKDSV 278
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ++ A LPPVSY KA+D ++ C
Sbjct: 279 PARVTLGVTTLLTMTTQNSGINAKLPPVSYTKAIDVWIGVC 319
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 65/88 (73%)
Query: 79 GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLS 138
G ++C V+ +L+R YYL YIP ++V++SWVSFW+ +A PARV+LGVT+LLT++
Sbjct: 411 GEYSCARVMLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMT 470
Query: 139 TQHAKSQASLPPVSYLKAVDAFMSACTV 166
TQ + A LPPVSY+KAVD ++ AC +
Sbjct: 471 TQASGINAKLPPVSYIKAVDVWIGACLI 498
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 166 VSSTSLTFNDILPEDPKLYD-KMRPPKKE------GQPTIVYFHVTVMGLDSIDENSMTY 218
V+ L +I+ K YD ++RP G P +V ++ + + ID+ +M Y
Sbjct: 17 VAKKKLKEQEIIQRTLKDYDWRVRPRGSNLSWPDTGGPVLVSVNIYLRSISKIDDVNMEY 76
Query: 219 AADIFFAQTWKDHRL---RLPENMTS--EYRLL----EVDWLKNMWRPDSFFKNAKAVTF 269
+A F + W D RL RL + T + +L + D + +W PD+FF+N K
Sbjct: 77 SAQFTFREEWNDARLAYGRLADENTQVPPFVVLAASEQADLTQQIWMPDTFFQNEKEARR 136
Query: 270 QTMTIPNHYVWLYKDKTILYMVKF 293
+ PN + ++ D ILY V+
Sbjct: 137 HLIDKPNVLIRIHPDGQILYSVRL 160
>gi|308500898|ref|XP_003112634.1| CRE-GLC-3 protein [Caenorhabditis remanei]
gi|308267202|gb|EFP11155.1| CRE-GLC-3 protein [Caenorhabditis remanei]
Length = 502
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 103/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R+++ LSC M+ YP D Q C + + S ++T D+ ++W + P+ + + + LP +
Sbjct: 154 RISMVLSCPMHLQYYPMDVQTCLIDLASYAYTESDIEYRWKEKEPVQLKKGLHSSLPSFE 213
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL + LKR+ YYL YIP+ ++VI+SWVSFW+ A
Sbjct: 214 LNSVNTDLCTSKTNTGTYSCLRTVLELKRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAV 273
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ AC
Sbjct: 274 PARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGAC 314
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 182 KLYD-KMRPPK------KEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL- 233
K YD ++RPP +V ++ + + ID+ +M Y+ + F + W D RL
Sbjct: 37 KGYDWRVRPPGINLTIPGTHGAVVVTVNMLIRSISKIDDVNMEYSVQLTFREEWVDGRLA 96
Query: 234 -RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
P + T ++ +L + +W PDSFF+N K + PN + +++D ILY V+
Sbjct: 97 FGFPGDNTPDFLILTAG--QQIWMPDSFFQNEKQAHKHDIDKPNVLIRIHRDGRILYSVR 154
>gi|313747949|gb|ADR74385.1| putative glutamate-gated chloride channel [Brugia malayi]
Length = 427
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 104/161 (64%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TTDD+ ++W + P+ E + LP +
Sbjct: 159 RLSLVLSCPMSLEYYPLDRQTCLIDLASYAYTTDDIKYEWKLKNPIQQKEGLRQSLPSFE 218
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++C V+ +L+R YYL YIP ++V++SWVSFW+ +A
Sbjct: 219 LQDVLTDYCTSKTNTGEYSCARVMLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAV 278
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV+LGVT+LLT++TQ + A LPPVSY+KAVD ++ C
Sbjct: 279 PARVSLGVTTLLTMTTQASGINAKLPPVSYIKAVDIWIGVC 319
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 165 TVSSTSLTFNDILPEDPKLYD-KMRPPKKE------GQPTIVYFHVTVMGLDSIDENSMT 217
++ L +I+ K YD ++RP G P +V ++ + + ID+ +M
Sbjct: 16 VMAKKKLKEQEIIQRTLKDYDWRVRPRGSNLSWPDTGGPVLVSVNIYLRSISKIDDVNME 75
Query: 218 YAADIFFAQTWKDHRL---RLPENMTS--EYRLL----EVDWLKNMWRPDSFFKNAKAVT 268
Y+A F + W D RL RL + T + +L + D + +W PD+FF+N K
Sbjct: 76 YSAQFTFREEWNDARLAYERLADENTQVPPFVVLAASEQADLTQQIWMPDTFFQNEKEAR 135
Query: 269 FQTMTIPNHYVWLYKDKTILYMVKF 293
+ PN + ++ D ILY V+
Sbjct: 136 RHLIDKPNVLIRIHPDGQILYSVRL 160
>gi|1262893|gb|AAC25481.1| inhibitory amino acid receptor subunit gbr-2A [Caenorhabditis
elegans]
Length = 416
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 104/161 (64%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TT D+ ++W + P+ + + LP +
Sbjct: 163 RLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKEKKPIQQKDGLRQSLPSFE 222
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ + +TG ++CL VL+R YYL YIP+ ++VI+SWVSFW+ ++
Sbjct: 223 LQDVVTDYCTSLTNTGEYSCLRTRMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSV 282
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A++PPVSY KA+D ++ C
Sbjct: 283 PARVTLGVTTLLTMTTQSSGINANVPPVSYTKAIDVWIGVC 323
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPENMTSE---YRLL- 246
G P +V ++ + + ID+ +M Y+A F + W D RL R E+ +E + +L
Sbjct: 55 GGPVLVTVNIYLRSISKIDDVNMEYSAQFTFREEWTDQRLAYERYEESGDTEVPPFVVLA 114
Query: 247 ---EVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
D + +W PD+FF+N K + PN + ++K+ ILY V+
Sbjct: 115 TSENADQSQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRL 164
>gi|341891087|gb|EGT47022.1| CBN-GLC-3 protein [Caenorhabditis brenneri]
Length = 443
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R+++ LSC M+ YP D Q C + + S ++T D+ ++W P+ + + + LP Q
Sbjct: 99 RISMVLSCPMHLQYYPMDVQTCLIDLASYAYTESDIEYRWKLNDPVQLKKGLHSSLPSFQ 158
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL + L+R+ YYL YIP+ ++VI+SWVSFW+ A
Sbjct: 159 LNNVSTTLCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAV 218
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ AC
Sbjct: 219 PARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGAC 259
>gi|443721004|gb|ELU10509.1| hypothetical protein CAPTEDRAFT_200824 [Capitella teleta]
Length = 393
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 4/197 (2%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
++S RLTL+L C M YP D QECS+++ + + T D +I QW + + V+E ++LP
Sbjct: 163 VSSSTRLTLRLHCQMLLHHYPFDHQECSIEISTYAFTNDTMILQWRDDDAIEVNE-LDLP 221
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q +LV CSQ Y TG+F CLE F +R +GYYL Y+P LIV++SWVSFWI
Sbjct: 222 QFELVAIHQDRCSQAYKTGHFDCLEARFRFRRLVGYYLLQNYLPCVLIVMLSWVSFWISR 281
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPED 180
++ AR++LGVT++LTL+TQ + ++ V A+ FM+ ++ N+I E
Sbjct: 282 DSVAARISLGVTTILTLTTQAIDTWYTISNVFVFAALLEFMAVNVLTRQE---NEIAEEQ 338
Query: 181 PKLYDKMRPPKKEGQPT 197
+L D+ + P
Sbjct: 339 VRLEDEDEDHTADATPN 355
>gi|268565119|ref|XP_002639340.1| C. briggsae CBR-AVR-14 protein [Caenorhabditis briggsae]
Length = 416
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TT D+ ++W P+ + + LP +
Sbjct: 163 RLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKNTKPIQQKDGLRQSLPSFE 222
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ + +TG ++CL VL+R YYL YIP+ ++VI+SWVSFW+ ++
Sbjct: 223 LQDVVTDYCTSLTNTGEYSCLRTRMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSV 282
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ C
Sbjct: 283 PARVTLGVTTLLTMTTQSSGINAKLPPVSYTKAIDVWIGVC 323
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 167 SSTSLTFNDILPEDPKLYD-KMRPPK------KEGQPTIVYFHVTVMGLDSIDENSMTYA 219
S L +I+ K YD ++RP G P +V ++ + + ID+ +M Y+
Sbjct: 21 SKRKLKEQEIIQRILKDYDWRVRPRGMNATWPDTGGPVLVTVNIYLRSISKIDDVNMEYS 80
Query: 220 ADIFFAQTWKDHRL---RLPENMTSE---YRLL----EVDWLKNMWRPDSFFKNAKAVTF 269
A F + W D RL R E+ +E + +L D + +W PD+FF+N K
Sbjct: 81 AQFTFREEWTDQRLAYERYEESGDTEVPPFVVLATSENADQSQQIWMPDTFFQNEKEARR 140
Query: 270 QTMTIPNHYVWLYKDKTILYMVKF 293
+ PN + ++K+ ILY V+
Sbjct: 141 HLIDKPNVLIRIHKNGQILYSVRL 164
>gi|1401283|gb|AAB03404.1| glutamate-gated chloride channel [Onchocerca volvulus]
Length = 351
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 105/163 (64%), Gaps = 4/163 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TTDD+ ++W + P+ E + LP +
Sbjct: 160 RLSLVLSCPMSLEYYPLDRQTCLIDLASYAYTTDDIKYEWKVKNPIQQKEGLRQSLPSFE 219
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKR--RLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L T C+ +TG ++C V+ +L+R R YYL YIP ++V++SWVSFW+ +
Sbjct: 220 LQDVLTEYCTSKTNTGEYSCARVLLLLRREYRFSYYLIQLYIPCIMLVVVSWVSFWLDKD 279
Query: 122 AAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
A PARV+LGVT+LLT++TQ + A LPPVSY+KAVD ++ C
Sbjct: 280 AVPARVSLGVTTLLTMTTQASGINAKLPPVSYIKAVDVWIGVC 322
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 16/145 (11%)
Query: 165 TVSSTSLTFNDILPEDPKLYD-KMRPPKKE------GQPTIVYFHVTVMGLDSIDENSMT 217
V+ L +I+ K YD ++RP G P +V ++ + + ID+ +M
Sbjct: 17 VVAKKKLKEQEIIQRTLKDYDWRVRPRGNNLSWPDTGGPVLVSVNIYLRSISKIDDVNME 76
Query: 218 YAADIFFAQTWKDHRL---RLPENMTS--EYRLLEV----DWLKNMWRPDSFFKNAKAVT 268
Y+A F + W D RL RL + T + +L D + +W PD+FF+N K
Sbjct: 77 YSAQFTFREEWNDARLGYERLADENTQVPPFVVLAASEQPDLTQQIWMPDTFFQNEKEAR 136
Query: 269 FQTMTIPNHYVWLYKDKTILYMVKF 293
+ PN + ++ D ILY V+
Sbjct: 137 RHLIDKPNVLIRIHPDGQILYSVRL 161
>gi|405951986|gb|EKC19848.1| Glycine receptor subunit alpha-1 [Crassostrea gigas]
Length = 436
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 109/165 (66%), Gaps = 5/165 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL+L L+C MN YP D Q C + +E+ +T ++++F W + VD+ +E+PQ
Sbjct: 172 RLSLTLTCRMNLYNYPMDEQNCPIYIETYGYTEENVLFNWKSVDAVQVDD-VEMPQFYFR 230
Query: 66 KN-KTADCSQVYSTGN---FTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
K+ + C++ + G+ FTCL L+R +GYY+ ++P+ LIVI+SWVSFWI +
Sbjct: 231 KSPAISKCTRTFKYGSEATFTCLSTTLHLQRNIGYYMAQVFVPSILIVILSWVSFWIHVD 290
Query: 122 AAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A PAR++LGV ++LT++TQ A +ASLP VSY+KA+D + SAC V
Sbjct: 291 AIPARISLGVLTVLTITTQSAGIRASLPRVSYIKAIDVWNSACLV 335
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++ P +E + T V + ++ ++SI+E +M + + F QTW D RL S
Sbjct: 63 YDARIAPNYEEDRATNVTLQLYILSINSINEMAMDLSMETFLRQTWVDPRLNYEH--LSN 120
Query: 243 YRLLEVD--WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALME 300
+ LE+D + ++W PD++F N K F +T+PN + + ++ T+ Y ++
Sbjct: 121 FSNLELDQRMMADVWVPDTYFPNEKEAHFHVVTVPNRLLHISRNGTVFYSIRLSLTLTCR 180
Query: 301 YCLVNIVLGDSDLP 314
L N + + + P
Sbjct: 181 MNLYNYPMDEQNCP 194
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARLLTGQPMIPPNHQQAQR 352
FVF AL+EY +N+ + + A ++ + + A L+ Q + P ++
Sbjct: 336 FVFTALLEYAYINV-----QTRRHQKSASKETLLTIQASNP--LVLSQGVTPARCIDVRK 388
Query: 353 NLAQRAR---TRAINIDRFSRVFFPVLFAILNCTYWI--MFAE 390
+ R RA IDR +R FP+ FAI N T+WI MFA
Sbjct: 389 TIGAREMDYLKRARTIDRVARFAFPISFAIFNITFWIYYMFAH 431
>gi|355687685|gb|EHH26269.1| hypothetical protein EGK_16188 [Macaca mulatta]
Length = 497
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFYIX 234
Query: 66 KNKTADCSQVYST---GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
G +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 XXXXXXXXXXXXXXXXGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>gi|157885900|emb|CAP09191.1| glutamate gated chloride channel alpha 3 [Cyathostomum
tetracanthum]
Length = 468
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 103/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M+ YP D Q C + + S ++T +D+ ++W + P+ + + + LP Q
Sbjct: 166 RISLVLSCPMHLQYYPMDVQTCLIDLASYAYTDNDIEYRWKEKDPVQLKDGLNSSLPSFQ 225
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL + L+R+ YYL YIP+ ++VI+SWVSFW+ A
Sbjct: 226 LNNVSTTYCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIPSSMLVIVSWVSFWLDRTAV 285
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + LPPVSY KA+D ++ AC
Sbjct: 286 PARVTLGVTTLLTMTTQASGINPKLPPVSYTKAIDVWIGAC 326
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 182 KLYD-KMRPP------KKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL- 233
K YD ++RPP K P +V ++ + + ID+ +M Y+ + F ++W D RL
Sbjct: 49 KGYDWRVRPPGINLTAKGSHGPVVVDVNMLIRSISKIDDVNMEYSVQLTFRESWVDGRLA 108
Query: 234 -RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
LP + ++ +L + +W PDSFF+N K + PN + ++KD ILY V+
Sbjct: 109 YGLPGDNKPDFLILTAG--QQIWMPDSFFQNEKQAQKHMIDKPNVLIRVHKDGQILYSVR 166
Query: 293 F 293
Sbjct: 167 I 167
>gi|341883105|gb|EGT39040.1| CBN-GLC-2 protein [Caenorhabditis brenneri]
Length = 595
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TT D+ ++W P+ + + LP +
Sbjct: 142 RLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKDTKPIQQKDGLRQSLPSFE 201
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ + +TG ++CL VL+R YYL YIP+ ++VI+SWVSFW+ ++
Sbjct: 202 LQDVVTDYCTSLTNTGEYSCLRTRMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSV 261
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ C
Sbjct: 262 PARVTLGVTTLLTMTTQSSGINAKLPPVSYTKAIDVWIGVC 302
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 16/102 (15%)
Query: 79 GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP----------------EA 122
G ++C V+ L+R YYL YIP ++V++SWVSFW+ +A
Sbjct: 387 GEYSCARVVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKVKQFLKGVLYLNDELKDA 446
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV+LGVT+LLT++TQ + + LPPVSY+KAVD ++ C
Sbjct: 447 VPARVSLGVTTLLTMTTQASGINSKLPPVSYIKAVDVWIGVC 488
>gi|436874456|gb|JAA65059.1| AVR-15 [Oesophagostomum dentatum]
Length = 447
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 104/166 (62%), Gaps = 3/166 (1%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDE--KIE 58
M SE R++L LSC M YP D Q C L + S + TTDD+++ W P+
Sbjct: 159 MYSE-RISLVLSCPMYIQNYPMDEQVCGLDLGSYAFTTDDILYHWHDPNPIQFHPLLNTS 217
Query: 59 LPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWI 118
LP + + T CS + STG ++C+ ++ LKR YY+ YIP+ L+VI+SWVSFW+
Sbjct: 218 LPSFIIRQAFTDTCSSLTSTGEYSCIRMVLHLKRLFSYYMVQIYIPSTLLVIVSWVSFWL 277
Query: 119 KPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ A PARVTLGVT+LLT++TQ A +SLP VSY+KAVD ++ C
Sbjct: 278 ERTAVPARVTLGVTTLLTMTTQAASINSSLPAVSYVKAVDVWIGVC 323
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
Query: 184 YDK-MRPPKKE----GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN 238
YD+ +RPP ++ +P +V + + + +ID M Y+ I F Q W D RL
Sbjct: 48 YDRRIRPPNRDEHGKNKPVVVDVNFYLRSISNIDFVRMEYSLQITFRQFWHDRRLEYGSM 107
Query: 239 MTSEY--RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
+ L + +W PD+FF N K + N + ++ + T++Y
Sbjct: 108 FKGREVPKFLILTDKDAIWTPDTFFMNEKRAHRHDIDKLNLMIRVHPNGTVMY 160
>gi|71980442|ref|NP_001020963.1| Protein AVR-14, isoform b [Caenorhabditis elegans]
gi|351065347|emb|CCD61324.1| Protein AVR-14, isoform b [Caenorhabditis elegans]
Length = 430
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 103/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TT D+ ++W + P+ + + LP +
Sbjct: 163 RLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKEKKPIQQKDGLRQSLPSFE 222
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ + +TG ++C V+ L+R YYL YIP ++V++SWVSFW+ +A
Sbjct: 223 LQDVVTDYCTSLTNTGEYSCARVVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAV 282
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV+LGVT+LLT++TQ + + LPPVSY+KAVD ++ C
Sbjct: 283 PARVSLGVTTLLTMTTQASGINSKLPPVSYIKAVDVWIGVC 323
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPENMTSE---YRLL- 246
G P +V ++ + + ID+ +M Y+A F + W D RL R E+ +E + +L
Sbjct: 55 GGPVLVTVNIYLRSISKIDDVNMEYSAQFTFREEWTDQRLAYERYEESGDTEVPPFVVLA 114
Query: 247 ---EVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
D + +W PD+FF+N K + PN + ++K+ ILY V+
Sbjct: 115 TSENADQSQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRL 164
>gi|157713476|gb|ABV68896.1| glutamate gated chloride channel alpha 3A subunit variant [Cooperia
oncophora]
gi|297374627|emb|CBM40945.1| GluClalpha3A protein [Cooperia oncophora]
Length = 422
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TT D+ ++W + P+ + + LP +
Sbjct: 171 RLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKEQNPVQQKDGLRQSLPSFE 230
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL VL+R YYL YIP+ ++VI+SWVSFW+ ++
Sbjct: 231 LQDVVTKYCTSKTNTGEYSCLRTQMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ C
Sbjct: 291 PARVTLGVTTLLTMTTQSSGINAKLPPVSYTKAIDVWIGVC 331
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP--ENMTSEYRLLEV--- 248
G P +V ++ + + ID+ +M Y+A F + W D RL E+ ++E V
Sbjct: 64 GGPVLVTVNIYLRSISKIDDVNMEYSAQFTFREEWVDARLAYGRFEDESTEVPPFVVLAT 123
Query: 249 ----DWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
D + +W PD+FF+N K + PN + ++KD +ILY V+
Sbjct: 124 SENADQSQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKDGSILYSVRL 172
>gi|260817110|ref|XP_002603430.1| hypothetical protein BRAFLDRAFT_222743 [Branchiostoma floridae]
gi|229288749|gb|EEN59441.1| hypothetical protein BRAFLDRAFT_222743 [Branchiostoma floridae]
Length = 388
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 106/160 (66%), Gaps = 1/160 (0%)
Query: 8 TLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLVKN 67
T+ L+C MNF ++P D Q C ++MES HTT D+ W E + + E+I++P LV
Sbjct: 118 TILLACPMNFQLFPMDNQVCKIKMESYGHTTKDIEIWWSREDAVLISEEIQMPDYDLVTW 177
Query: 68 K-TADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPAR 126
K +C ++TG ++C+E L R +GYYL YIP+ LIV++SW+SFWI PE APAR
Sbjct: 178 KINNNCDSHHTTGTYSCIEAKLFLIRHIGYYLIQHYIPSILIVVLSWLSFWISPEIAPAR 237
Query: 127 VTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
V LG+T++LT +T A S++++P SY++A+D +M C +
Sbjct: 238 VALGITTVLTSTTLTAVSRSAMPRFSYVRAIDVWMMTCGL 277
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD+ P +G P VY + + SI E SM Y +F Q W D R + ++
Sbjct: 10 YDQRLRPNFKGPPVQVYCSAYINSISSISEESMDYTVMLFLRQRWNDPRF-VYQDYNDSI 68
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E L +W PD +F N K F++ + + + ++ + +LY K
Sbjct: 69 TLYE-KVLDKIWVPDIYFVNEKGAPFESTSGHSTLLRIHPNGDVLYSAK 116
>gi|432949783|ref|XP_004084256.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oryzias latipes]
Length = 517
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD-EKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + E+IELPQ +
Sbjct: 149 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGVGAVTGVERIELPQFSI 208
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V +K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 209 VDHKLISKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 268
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 269 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 310
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 41 KGYDIRLRPDFGGPPVRVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLN 100
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 101 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 154
>gi|341882996|gb|EGT38931.1| hypothetical protein CAEBREN_32774 [Caenorhabditis brenneri]
Length = 329
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TT D+ ++W P+ + + LP +
Sbjct: 76 RLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKDTKPIQQKDGLRQSLPSFE 135
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ + +TG ++CL VL+R YYL YIP+ ++VI+SWVSFW+ ++
Sbjct: 136 LQDVVTDYCTSLTNTGEYSCLRTRMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSV 195
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ C
Sbjct: 196 PARVTLGVTTLLTMTTQSSGINAKLPPVSYTKAIDVWIGVC 236
>gi|17561822|ref|NP_504441.1| Protein GLC-3 [Caenorhabditis elegans]
gi|5678811|emb|CAB51708.1| Glutamate-gated chloride channel subunit [Caenorhabditis elegans]
gi|373219610|emb|CCD69051.1| Protein GLC-3 [Caenorhabditis elegans]
Length = 484
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 103/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R+++ LSC M+ YP D Q C + + S ++T +D+ ++W P+ + + + LP +
Sbjct: 154 RISMVLSCPMHLQYYPMDVQTCLIDLASYAYTENDIEYRWKKTDPVQLKKGLHSSLPSFE 213
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL + L+R+ YYL YIP+ ++VI+SWVSFW+ A
Sbjct: 214 LNNVDTTLCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAV 273
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ AC
Sbjct: 274 PARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGAC 314
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 164 CTVSSTSLTFNDILPEDPKLYD-KMRPPK------KEGQPTIVYFHVTVMGLDSIDENSM 216
C SS + +L K YD ++RPP IVY ++ + + ID+ +M
Sbjct: 22 CDASSDTEIIKKLLG---KGYDWRVRPPGINLTIPGTHGAVIVYVNMLIRSISKIDDVNM 78
Query: 217 TYAADIFFAQTWKDHRL--RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y+ + F + W D RL P + T ++ +L + +W PDSFF+N K +
Sbjct: 79 EYSVQLTFREEWVDGRLAYGFPGDSTPDFLILTAG--QQIWMPDSFFQNEKQAHKHDIDK 136
Query: 275 PNHYVWLYKDKTILYMVKF 293
PN + +++D ILY V+
Sbjct: 137 PNVLIRIHRDGRILYSVRI 155
>gi|260833180|ref|XP_002611535.1| hypothetical protein BRAFLDRAFT_56827 [Branchiostoma floridae]
gi|229296906|gb|EEN67545.1| hypothetical protein BRAFLDRAFT_56827 [Branchiostoma floridae]
Length = 360
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 106/160 (66%), Gaps = 1/160 (0%)
Query: 8 TLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLVKN 67
T+ L+C MNF ++P D Q C ++MES HTT D+ W E + + E+I++P LV
Sbjct: 78 TILLACPMNFQLFPMDNQVCKIKMESYGHTTKDIEIWWSREDAVLISEEIQMPDYDLVTW 137
Query: 68 K-TADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPAR 126
K +C ++TG ++C+E L R +GYYL YIP+ LIV++SW+SFWI PE APAR
Sbjct: 138 KINNNCDSHHTTGTYSCIEAKLFLIRHIGYYLIQHYIPSILIVVLSWLSFWISPEIAPAR 197
Query: 127 VTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
V LG+T++LT +T A S++++P SY++A+D +M C +
Sbjct: 198 VALGITTVLTSTTLTAVSRSAMPRFSYVRAIDVWMMTCGL 237
>gi|432878723|ref|XP_004073382.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oryzias latipes]
Length = 526
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W E ++ ++IELPQ +
Sbjct: 155 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGEGAVSGVDRIELPQFSI 214
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 215 VDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 274
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 275 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 316
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---N 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL E N
Sbjct: 47 KGYDIRLRPDFGGAPVAVGMNIDISSIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIAYN 106
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 107 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 161
Query: 299 MEYCLVNI 306
C++++
Sbjct: 162 ---CMMDL 166
>gi|1262895|gb|AAC25482.1| inhibitory amino acid receptor subunit gbr-2B [Caenorhabditis
elegans]
Length = 430
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TT D+ ++W + P+ + + LP +
Sbjct: 163 RLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKEKKPIQQKDGLRQSLPSFE 222
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ + +TG ++C V+ L+R YYL YIP ++V++SWVSFW+ +A
Sbjct: 223 LQDVVTDYCTSLTNTGEYSCARVVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAV 282
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV+LGVT+LLT++TQ + LPPVSY+KAVD ++ C
Sbjct: 283 PARVSLGVTTLLTMTTQASGINTKLPPVSYIKAVDVWIGVC 323
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPENMTSE---YRLL- 246
G P +V ++ + + ID+ +M Y+A F + W D RL R E+ +E + +L
Sbjct: 55 GGPVLVTVNIYLRSISKIDDVNMEYSAQFTFREEWTDQRLAYERYEESGDTEVPPFVVLA 114
Query: 247 ---EVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
D + +W PD+FF+N K + PN + ++K+ ILY V+
Sbjct: 115 TSENADQSQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRL 164
>gi|292620123|ref|XP_002664179.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Danio rerio]
Length = 483
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 104/161 (64%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + IELPQ ++
Sbjct: 161 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWQGGSSVTGVDNIELPQFSII 220
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
KT V++TG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+ A
Sbjct: 221 DYKTLSKKVVFATGSYPRLSLSFKLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAA 280
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 281 RVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFV 321
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + + +D + E +M Y ++F Q+W+D RL +P N
Sbjct: 53 KGYDIRLRPDFGGPPVDVGMSIDISSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLN 112
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 113 LTLDNRVAD-----QLWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 166
>gi|7159696|emb|CAA74622.2| GBR-2A protein [Haemonchus contortus]
Length = 421
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S +TT D+ ++W + P+ + + LP +
Sbjct: 171 RLSLVLSCPMSLEFYPLDRQNCLIDLASYGYTTQDIKYEWKEQNPVQQKDGLRQSLPSFE 230
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL VL+R YYL YIP+ ++VI+SWVSFW+ ++
Sbjct: 231 LQDVVTKYCTSKTNTGEYSCLRTQMVLRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A++PPVSY KA+D ++ C
Sbjct: 291 PARVTLGVTTLLTMTTQSSGINANVPPVSYTKAIDVWIGVC 331
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 17/161 (10%)
Query: 149 PPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD-KMRPPK------KEGQPTIVYF 201
P ++ + V MSA + L +I+ YD ++RP G P +V
Sbjct: 13 PMLALICTVSTIMSAVE-AKRKLKEQEIIQRILNNYDWRVRPRGLNASWPDTGGPVLVTV 71
Query: 202 HVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP--ENMTSE---YRLL----EVDWLK 252
++ + + ID+ +M Y+A F + W D RL E+ ++E + +L D +
Sbjct: 72 NIYLRSISKIDDVNMEYSAQFTFREEWVDARLAYGRFEDESTEVPPFVVLATSENADQSQ 131
Query: 253 NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+W PD+FF+N K + PN + ++KD +ILY V+
Sbjct: 132 QIWMPDTFFQNEKVARRHLIDKPNVLIRIHKDGSILYSVRL 172
>gi|410915040|ref|XP_003970995.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Takifugu rubripes]
Length = 525
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + +KIELPQ +
Sbjct: 157 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVDKIELPQFSI 216
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V +K + V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 217 VDHKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 276
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 277 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 318
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 49 KGYDIRLRPDFGGPPVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLN 108
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 109 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 162
>gi|195457046|ref|XP_002075402.1| GK17727 [Drosophila willistoni]
gi|194171487|gb|EDW86388.1| GK17727 [Drosophila willistoni]
Length = 497
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W P P+ E ELP
Sbjct: 165 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPT-PVRGVEDAELP 223
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 224 QFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 283
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 284 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 329
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Query: 161 MSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAA 220
M A + + + T + IL + YD P G+P V +T+ D+I E +M Y
Sbjct: 32 MLAGRLENVTQTISKIL----QGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTI 87
Query: 221 DIFFAQTWKDHRLRL-----------PENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTF 269
++ Q W+D RL ++ ++ L D+ + +W PD+FF N K
Sbjct: 88 TMYLNQYWRDERLAFNIYGPYYDNDAADDGVNDVLTLSGDFAEKIWVPDTFFANDKNSFL 147
Query: 270 QTMTIPNHYVWLYKDKTILYMVKF 293
+T N V L D + Y ++F
Sbjct: 148 HDVTERNKLVRLGGDGAVTYGMRF 171
>gi|195044266|ref|XP_001991787.1| GH11877 [Drosophila grimshawi]
gi|193901545|gb|EDW00412.1| GH11877 [Drosophila grimshawi]
Length = 497
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W P P+ E ELP
Sbjct: 165 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPT-PVRGVEDAELP 223
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 224 QFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 283
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 284 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 329
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Query: 161 MSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAA 220
M A + + + T + IL + YD P G+P V +T+ D+I E +M Y
Sbjct: 32 MLAGRLENVTQTISKIL----QGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTI 87
Query: 221 DIFFAQTWKDHRLRL-----------PENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTF 269
++ Q W+D RL ++ ++ L D+ + +W PD+FF N K
Sbjct: 88 TMYLNQYWRDERLAFNIYGPYYDTDAEDDGVNDVLTLSGDFAEKIWVPDTFFANDKNSFL 147
Query: 270 QTMTIPNHYVWLYKDKTILYMVKF 293
+T N V L D + Y ++F
Sbjct: 148 HDVTERNKLVRLGGDGAVTYGMRF 171
>gi|195131083|ref|XP_002009980.1| GI15665 [Drosophila mojavensis]
gi|193908430|gb|EDW07297.1| GI15665 [Drosophila mojavensis]
Length = 498
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W P P+ E ELP
Sbjct: 166 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPT-PVRGVEDAELP 224
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 225 QFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 284
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 285 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 330
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Query: 161 MSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAA 220
M A + + + T + IL + YD P G+P V +T+ D+I E +M Y
Sbjct: 33 MLAGRLENVTQTISKIL----QGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTI 88
Query: 221 DIFFAQTWKDHRLRL-----------PENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTF 269
++ Q W+D RL ++ ++ L D+ + +W PD+FF N K
Sbjct: 89 TMYLNQYWRDERLAFNIYGPYYDSDADDDGVNDVLTLSGDFAEKIWVPDTFFANDKNSFL 148
Query: 270 QTMTIPNHYVWLYKDKTILYMVKF 293
+T N V L D + Y ++F
Sbjct: 149 HDVTERNKLVRLGGDGAVTYGMRF 172
>gi|45555535|ref|NP_996469.1| Ligand-gated chloride channel homolog 3 [Drosophila melanogaster]
gi|14286135|sp|Q08832.2|GBRB3_DROME RecName: Full=Gamma-aminobutyric acid receptor subunit beta-like;
AltName: Full=GABA(A) receptor; Flags: Precursor
gi|16767980|gb|AAL28208.1| GH08705p [Drosophila melanogaster]
gi|45446997|gb|AAS65370.1| Ligand-gated chloride channel homolog 3 [Drosophila melanogaster]
gi|220956304|gb|ACL90695.1| Lcch3-PA [synthetic construct]
Length = 496
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W P P+ E ELP
Sbjct: 164 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPT-PVRGVEDAELP 222
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 223 QFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 282
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 283 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 328
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 163 ACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADI 222
A + + + T ++IL + YD P G+P V +T+ D+I E +M Y +
Sbjct: 34 AGRLENVTQTISNIL----QGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITM 89
Query: 223 FFAQTWKDHRLRL----------PENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTM 272
+ Q W+D RL ++ S+ L D+ + +W PD+FF N K +
Sbjct: 90 YLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 149
Query: 273 TIPNHYVWLYKDKTILYMVKF 293
T N V L D + Y ++F
Sbjct: 150 TERNKLVRLGGDGAVTYGMRF 170
>gi|443730620|gb|ELU16044.1| hypothetical protein CAPTEDRAFT_3682 [Capitella teleta]
Length = 354
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 101/161 (62%), Gaps = 18/161 (11%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+++ LSC M YP DTQ C L ES +T D + F W + P+ +D ++LPQ
Sbjct: 110 KISAALSCPMQLHSYPMDTQICPLMFESFGYTMDIMYFSW-LDTPVEIDAGLQLPQ---- 164
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
G F CLE+ FVL+R +GY+L Y+P+ LIVI+SWVSFWI EA PA
Sbjct: 165 -------------GAFPCLEIRFVLRRDIGYFLIQVYVPSILIVILSWVSFWINIEATPA 211
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV+LG+ ++LT++TQ + ++ +LP VSY+KA+D +MS C V
Sbjct: 212 RVSLGLLTVLTMTTQSSGARTTLPRVSYIKAIDVWMSTCLV 252
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 197 TIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWR 256
T V + V SI E +M Y+ I+ Q W+D RL+ + L W ++W
Sbjct: 16 TEVSLGIYVNSFYSISEQTMDYSVSIYLRQAWRDPRLQFSLYGKKKTIKLANGW-DHVWV 74
Query: 257 PDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
PD+FF+N K F +T+PN + L + + Y+ K
Sbjct: 75 PDTFFRNEKRADFHQITVPNRLMNLDRTGHVWYVTK 110
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 18/102 (17%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPA------KQDKIFELAAKENARLLTGQPMIPPN 346
FVF +L+E+ VN+V + E K KI + + R T +P+ P
Sbjct: 253 FVFTSLLEFAFVNVVSRKNHARAHTEGKGNEGKLKAQKIDKFSRNRQRRDGTTKPLDPEG 312
Query: 347 HQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+A+R ID+ SR FP+ F + N YWIM+
Sbjct: 313 KFKARR------------IDKVSRKAFPLAFLLFNIVYWIMY 342
>gi|410914014|ref|XP_003970483.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Takifugu rubripes]
Length = 526
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + ++ +KIELPQ +
Sbjct: 155 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGVDKIELPQFSI 214
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 215 VDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 274
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 275 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 316
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---N 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL E N
Sbjct: 47 KGYDIRLRPDFGGAPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIAYN 106
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 107 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 160
>gi|195392956|ref|XP_002055120.1| GJ19199 [Drosophila virilis]
gi|194149630|gb|EDW65321.1| GJ19199 [Drosophila virilis]
Length = 497
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W P P+ E ELP
Sbjct: 165 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKP-TPVRGVEDAELP 223
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 224 QFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 283
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 284 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 329
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Query: 161 MSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAA 220
M A + + + T + IL + YD P G+P V +T+ D+I E +M Y
Sbjct: 32 MLAGRLENVTQTISKIL----QGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTI 87
Query: 221 DIFFAQTWKDHRLRL-----------PENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTF 269
++ Q W+D RL ++ ++ L D+ + +W PD+FF N K
Sbjct: 88 TMYLNQYWRDERLAFNIYGPYYDSDADDDGVNDVLTLSGDFAEKIWVPDTFFANDKNSFL 147
Query: 270 QTMTIPNHYVWLYKDKTILYMVKF 293
+T N V L D + Y ++F
Sbjct: 148 HDVTERNKLVRLGGDGAVTYGMRF 171
>gi|195479056|ref|XP_002100749.1| GE17238 [Drosophila yakuba]
gi|194188273|gb|EDX01857.1| GE17238 [Drosophila yakuba]
Length = 496
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W P P+ E ELP
Sbjct: 164 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPT-PVRGVEDAELP 222
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 223 QFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 282
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 283 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 328
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 163 ACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADI 222
A + + + T ++IL + YD P G+P V +T+ D+I E +M Y +
Sbjct: 34 AGRLENVTQTISNIL----QGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITM 89
Query: 223 FFAQTWKDHRLRL----------PENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTM 272
+ Q W+D RL ++ S+ L D+ + +W PD+FF N K +
Sbjct: 90 YLNQYWRDERLAFNIFGQYFEDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 149
Query: 273 TIPNHYVWLYKDKTILYMVKF 293
T N V L D + Y ++F
Sbjct: 150 TERNKLVRLGGDGAVTYGMRF 170
>gi|393906135|gb|EFO20646.2| hypothetical protein LOAG_07842, partial [Loa loa]
Length = 294
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 102/160 (63%), Gaps = 2/160 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M+ YP D Q C + + S ++TTDD+ + W+ + P+ + + + LP Q
Sbjct: 134 RISLVLSCPMHLQYYPMDIQTCLIDLASYAYTTDDIEYVWESKDPVQLKDGLHSSLPSFQ 193
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL ++ L+R+ YYL Y P+ ++VI+SWVSFW+ A
Sbjct: 194 LSNVTTTFCTSKTNTGTYSCLRIVLELRRQFSYYLLQLYAPSLMLVIVSWVSFWLDRTAV 253
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSA 163
PARVTLGVT+ LT++TQ + A LPPVSY KA+D ++
Sbjct: 254 PARVTLGVTTFLTMTTQASGINAKLPPVSYTKAIDVWIGG 293
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 182 KLYD-KMRPPKKE------GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR 234
K YD ++RPP P +V ++ + + ID+ +M Y+ + F ++W D RL
Sbjct: 17 KGYDWRVRPPGTNLSITGGHGPVVVAVNMLIRSISKIDDVNMEYSVQLTFRESWVDGRLA 76
Query: 235 L--PENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
P + T ++ +L + +W PDSFF+N K + PN + ++KD TILY V+
Sbjct: 77 FGYPRDNTPDFVILTTG--QQIWMPDSFFQNEKHAQRHMIDKPNVLIRIHKDGTILYSVR 134
Query: 293 F 293
Sbjct: 135 I 135
>gi|354499223|ref|XP_003511710.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Cricetulus griseus]
Length = 323
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 108/163 (66%), Gaps = 1/163 (0%)
Query: 5 YRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQ 63
+R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ
Sbjct: 3 FRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFS 62
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 63 IVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 122
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 123 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 165
>gi|348519034|ref|XP_003447036.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oreochromis niloticus]
Length = 515
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + +KIELPQ +
Sbjct: 147 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVDKIELPQFSI 206
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V +K + V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 207 VDHKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 266
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 267 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 308
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 39 KGYDIRLRPDFGGPPVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSDIPLN 98
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 99 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 152
>gi|194894090|ref|XP_001978006.1| GG17931 [Drosophila erecta]
gi|195555119|ref|XP_002077031.1| GD24824 [Drosophila simulans]
gi|304726|gb|AAA28559.1| GABA receptor beta subunit [Drosophila melanogaster]
gi|386138|gb|AAB27090.1| putative gamma-aminobutyric acid receptor beta subunit [Drosophila
melanogaster]
gi|190649655|gb|EDV46933.1| GG17931 [Drosophila erecta]
gi|194203049|gb|EDX16625.1| GD24824 [Drosophila simulans]
Length = 496
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W P P+ E ELP
Sbjct: 164 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPT-PVRGVEDAELP 222
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 223 QFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 282
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 283 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 328
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 163 ACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADI 222
A + + + T ++IL + YD P G+P V +T+ D+I E +M Y +
Sbjct: 34 AGRLENVTQTISNIL----QGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITM 89
Query: 223 FFAQTWKDHRLRL----------PENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTM 272
+ Q W+D RL ++ S+ L D+ + +W PD+FF N K +
Sbjct: 90 YLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 149
Query: 273 TIPNHYVWLYKDKTILYMVKF 293
T N V L D + Y ++F
Sbjct: 150 TERNKLVRLGGDGAVTYGMRF 170
>gi|11140020|emb|CAC16086.1| GABAA receptor betaZ2 subunit [Danio rerio]
Length = 519
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + ++ E+IELPQ +
Sbjct: 152 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGVERIELPQFSI 211
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 VGYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 271
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 313
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 44 KGYDIRLRPDFGGAPVAVRMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLN 103
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 104 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 157
>gi|429467307|gb|AFZ85296.1| glutamate-gated chloride channel subunit alpha 4, partial
[Cylicostephanus goldi]
Length = 381
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M+ YP D Q C + + S ++T +D+ ++W + P+ + + + LP Q
Sbjct: 77 RISLVLSCPMHLQYYPMDVQTCLIDLASYAYTDNDIEYRWKEKDPVQLKDGLNSSLPSFQ 136
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL + L+R+ YYL YIP+ ++V + WVSFW+ A
Sbjct: 137 LNNVSTTYCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIPSSMLVXVXWVSFWLDRTAV 196
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ AC
Sbjct: 197 PARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGAC 237
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 216 MTYAADIFFAQTWKDHRL--RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMT 273
M Y+ + F ++W D RL LP + ++ +L + +W PDSFF+N K +
Sbjct: 1 MEYSVQLTFRESWVDGRLAYGLPGDNKPDFLILTAG--QQIWMPDSFFQNEKQAQKHMID 58
Query: 274 IPNHYVWLYKDKTILYMVKF 293
PN + ++KD I Y V+
Sbjct: 59 KPNVLIRVHKDGQIPYSVRI 78
>gi|443716915|gb|ELU08208.1| hypothetical protein CAPTEDRAFT_110825, partial [Capitella teleta]
Length = 439
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
RLT+ C M+ +P DTQ CSL++ES ++ D+++ W P+ + +D + +PQ
Sbjct: 124 RLTVTAVCDMDLTYFPFDTQICSLEIESYGYSDKDIVYSWHEGPKDSVGIDSDVRMPQFH 183
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ ++ + STGN++ L F R +GYY+ Y+P+ LIV++SWVSFW+ +A
Sbjct: 184 VKGHRAEAMVERLSTGNYSRLGCQFHFSRSIGYYVIQIYVPSTLIVVLSWVSFWLSRDAV 243
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
PARV LG+T++LT++T + + ASLP +SY+K++D F+ C +
Sbjct: 244 PARVALGITTVLTMTTLISSTNASLPKISYMKSIDVFLVTCFI 286
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P + P V + + + SI E M + D +F Q W+D RL+ P+N +
Sbjct: 18 YDKRLRPNYKAAPVEVGITMFISSVSSISEVDMDFTLDFYFRQNWQDPRLQFPDNESE-- 75
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALME 300
+ + L+ +W PD+FF NAK F T N ++ + +L ++ A+ +
Sbjct: 76 LCISNEMLEKIWWPDTFFANAKNAKFHIATTKNAFLRIKPTGHVLQSIRLTVTAVCD 132
>gi|47214122|emb|CAG01380.1| unnamed protein product [Tetraodon nigroviridis]
Length = 450
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W E+ + +IELPQ +
Sbjct: 129 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGEIAVTGVTRIELPQFSI 188
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 189 VDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 248
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 249 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 290
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V + V +D + E +M Y ++F Q W+D RL +P N
Sbjct: 21 KGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYVGIPLN 80
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 81 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 134
>gi|148277563|ref|NP_001019558.2| gamma-aminobutyric acid A receptor, beta 2 precursor [Danio rerio]
Length = 519
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + ++ E+IELPQ +
Sbjct: 152 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGVERIELPQFSI 211
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 VDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 271
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 313
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 44 KGYDIRLRPDFGGAPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLN 103
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 104 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 157
>gi|301607832|ref|XP_002933494.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Xenopus (Silurana) tropicalis]
Length = 477
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ + + EKIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIKFYWNGGDKAITGVEKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K + ++STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 IDYKMVSRNVIFSTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G V + V +D + E +M Y ++F Q+W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPSVEVGMRIDVASIDMVSEVNMDYTLTMYFQQSWRDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKRSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|313220512|emb|CBY31363.1| unnamed protein product [Oikopleura dioica]
gi|313229838|emb|CBY07543.1| unnamed protein product [Oikopleura dioica]
Length = 354
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 104/163 (63%), Gaps = 4/163 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL+L LSC + +P D Q C ++ ES ++T D++F+W PL + + LPQ L+
Sbjct: 135 RLSLVLSCHLLLHRFPLDVQCCKIRAESFGYSTQDVVFEWTKIKPLDMASNLTLPQFTLL 194
Query: 66 KNKTADCSQVYS--TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ C+ Y+ GN+TCL+ F+L+R LGYYL YIP+ LIV++SW+ FW+ ++
Sbjct: 195 GSTYKSCTIRYARRGGNYTCLDATFILRRELGYYLIQMYIPSLLIVVLSWLGFWVNVDST 254
Query: 124 PARVTLGVTSLLTLSTQHAKSQA--SLPPVSYLKAVDAFMSAC 164
PAR TLG+T++ T+S+ + A SLP VSY+KA+D ++ C
Sbjct: 255 PARTTLGITTVWTISSMSSSENAASSLPKVSYVKAIDIWLMLC 297
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 179 EDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN 238
E K YDK P ++ +PT V + LDS+DE +M Y +F WKD RL N
Sbjct: 23 EKIKYYDKRIRPYEKERPTGVRVSYHIPNLDSVDEQAMDYRLSMFLRMRWKDPRLSWGNN 82
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPN 276
+ + + D + +W PD FF N K+ +M N
Sbjct: 83 TECKLQ-VHPDVMDKIWIPDLFFSNEKSARIHSMITNN 119
>gi|348552646|ref|XP_003462138.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Cavia porcellus]
Length = 421
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 102 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 161
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 162 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 221
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 222 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 263
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 215 SMTYAADIFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQT 271
S Y ++F Q W+D RL +P N+T + R+ + +W PD++F N K
Sbjct: 27 SGDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHG 81
Query: 272 MTIPNHYVWLYKDKTILYMVKFVFMA 297
+T+ N + L+ D T+LY ++ A
Sbjct: 82 VTVKNRMIRLHPDGTVLYGLRITTTA 107
>gi|119578058|gb|EAW57654.1| gamma-aminobutyric acid (GABA) A receptor, beta 3, isoform CRA_b
[Homo sapiens]
Length = 409
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 90 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 149
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 150 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 209
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 210 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 251
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 202 HVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPD 258
++ + +D + E +M Y ++F Q W+D RL +P N+T + R+ + +W PD
Sbjct: 2 NIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPD 56
Query: 259 SFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 57 TYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 95
>gi|313220513|emb|CBY31364.1| unnamed protein product [Oikopleura dioica]
Length = 354
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 104/163 (63%), Gaps = 4/163 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL+L LSC + +P D Q C ++ ES ++T D++F+W PL + + LPQ L+
Sbjct: 135 RLSLVLSCHLLLHRFPLDVQCCKIRAESFGYSTQDVVFEWTKIKPLDMASNLTLPQFTLL 194
Query: 66 KNKTADCSQVYS--TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ C+ Y+ GN+TCL+ F+L+R LGYYL YIP+ LIV++SW+ FW+ ++
Sbjct: 195 GSTYKSCTIRYARRGGNYTCLDATFILRRELGYYLIQMYIPSLLIVVLSWLGFWVNVDST 254
Query: 124 PARVTLGVTSLLTLSTQHAKSQA--SLPPVSYLKAVDAFMSAC 164
PAR TLG+T++ T+S+ + A SLP VSY+KA+D ++ C
Sbjct: 255 PARTTLGITTVWTISSMSSSENAASSLPKVSYVKAIDIWLMLC 297
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 179 EDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN 238
E K YDK P ++ +PT V + LDS+DE +M Y +F WKD RL N
Sbjct: 23 EKIKYYDKRIRPYEKERPTGVRVSYHIPNLDSVDEQAMDYRLSMFLRMRWKDPRLSWGNN 82
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPN 276
+ + + D + +W PD FF N K+ +M N
Sbjct: 83 TECKLQ-VHPDVMDKIWIPDLFFSNEKSARIHSMITNN 119
>gi|357627557|gb|EHJ77210.1| ligand-gated chloride channel-like protein 3 [Danaus plexippus]
Length = 478
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W + P+ E ELP
Sbjct: 153 VTYGMRFTATLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWK-DTPVRGVEDAELP 211
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ ++T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 212 QFSILGHETNDRKEKLATGVYQRLSLSFKLRRNIGYFVFQTYLPSILIVMLSWVSFWINH 271
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 272 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 317
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 63/154 (40%), Gaps = 2/154 (1%)
Query: 140 QHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIV 199
+ ++AS PP + L A +S + YD P G+P V
Sbjct: 8 REGVTRASTPPAAALPGSYDHAGALNFFGSSTNVTQTVSRILDGYDIRLRPNFGGEPLYV 67
Query: 200 YFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDS 259
+T+ D+I E +M Y ++ Q WKD RL M E L D+ +W PD+
Sbjct: 68 GMDLTIASFDAISEVNMDYTITLYLNQYWKDERLGF--GMQDEVLTLSGDFADKIWVPDT 125
Query: 260 FFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
FF N K +T N V L D + Y ++F
Sbjct: 126 FFANDKNSFLHDVTERNKLVRLGGDGGVTYGMRF 159
>gi|157954037|ref|NP_001103251.1| ligand-gated chloride channel homolog 3 [Tribolium castaneum]
gi|156447611|gb|ABU63598.1| GABA-gated ion channel [Tribolium castaneum]
gi|270006356|gb|EFA02804.1| ligand-gated chloride channel homolog 3 [Tribolium castaneum]
Length = 480
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W E P+ E+ ELP
Sbjct: 147 ITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYW-KETPVRGVEEAELP 205
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 206 QFTIIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 265
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 266 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 311
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G+P +V +T+ D+I E +M Y ++ Q WKD RL E
Sbjct: 46 YDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFSNE--EEI 103
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L D+ + +W PD+FF N K +T N V L D I Y ++F
Sbjct: 104 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLNGDGAITYGMRF 153
>gi|157127002|ref|XP_001661036.1| gamma-aminobutyric-acid receptor a beta subunit 1, 2, 3, putative
[Aedes aegypti]
gi|108873057|gb|EAT37282.1| AAEL010710-PA [Aedes aegypti]
Length = 468
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W P+ E+ ELP
Sbjct: 136 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVLMYW-RSTPIRGVEEAELP 194
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 195 QFTIIGYETNDRKERLATGEYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 254
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 255 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 300
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 17/146 (11%)
Query: 161 MSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAA 220
M+A + + + T + IL + YD P G P V +T+ D+I E +M Y
Sbjct: 1 MAAGRLENVTQTISRIL----EGYDIRLRPNFGGDPLHVGMDLTIASFDAISEVNMDYTI 56
Query: 221 DIFFAQTWKDHRLR-------------LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAV 267
++ Q WKD RL + ++ ++ L D+ + +W PD+FF N K
Sbjct: 57 TMYLNQYWKDERLAFNARQYDQNGDIMIEDDGANDVITLSGDFAEKIWVPDTFFANDKNS 116
Query: 268 TFQTMTIPNHYVWLYKDKTILYMVKF 293
+T N V L D ++ Y ++F
Sbjct: 117 FLHDVTERNKLVRLAGDGSVTYGMRF 142
>gi|431917312|gb|ELK16845.1| Gamma-aminobutyric acid receptor subunit beta-3 [Pteropus alecto]
Length = 386
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 69 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 128
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 129 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 188
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 189 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 230
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 222 IFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHY 278
++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+ N
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRM 55
Query: 279 VWLYKDKTILYMVKFVFMA 297
+ L+ D T+LY ++ A
Sbjct: 56 IRLHPDGTVLYGLRITTTA 74
>gi|403306401|ref|XP_003943725.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Saimiri boliviensis boliviensis]
Length = 388
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 69 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 128
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 129 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 188
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 189 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 230
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 222 IFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHY 278
++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+ N
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRM 55
Query: 279 VWLYKDKTILYMVKFVFMA 297
+ L+ D T+LY ++ A
Sbjct: 56 IRLHPDGTVLYGLRITTTA 74
>gi|120419440|gb|ABM21539.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [Bos taurus]
Length = 343
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 25 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 84
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 85 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 144
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 145 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 186
>gi|380023904|ref|XP_003695749.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like [Apis
florea]
Length = 460
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W E P+ E+ ELP
Sbjct: 120 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAELP 178
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 179 QFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 238
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 239 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 284
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKN 253
G+P +V +T+ D+I E +M Y ++ Q WKD RL + E L D+ +
Sbjct: 29 GEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFSQE--EEVLTLSGDFAEK 86
Query: 254 MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+W PD+FF N K +T N V L D ++ Y ++F
Sbjct: 87 IWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRF 126
>gi|426248009|ref|XP_004017758.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Ovis
aries]
Length = 387
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 69 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 128
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 129 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 188
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 189 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 230
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 222 IFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHY 278
++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+ N
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRM 55
Query: 279 VWLYKDKTILYMVKFVFMA 297
+ L+ D T+LY ++ A
Sbjct: 56 IRLHPDGTVLYGLRITTTA 74
>gi|440910237|gb|ELR60053.1| Gamma-aminobutyric acid receptor subunit beta-3, partial [Bos
grunniens mutus]
Length = 393
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 75 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 134
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 135 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 194
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 195 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 236
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 218 YAADIFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y ++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+
Sbjct: 3 YTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTV 57
Query: 275 PNHYVWLYKDKTILYMVKFVFMA 297
N + L+ D T+LY ++ A
Sbjct: 58 KNRMIRLHPDGTVLYGLRITTTA 80
>gi|120781|sp|P26714.1|GBRB_LYMST RecName: Full=Gamma-aminobutyric acid receptor subunit beta;
AltName: Full=GABA(A) receptor; Flags: Precursor
gi|9627|emb|CAA41495.1| GABA-A receptor beta subunit [Lymnaea stagnalis]
Length = 499
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R T L+C M+ YP D QEC++++ES +T DD++ W + + E + LPQ +
Sbjct: 160 RFTTTLACMMDLHNYPLDHQECTVEIESYGYTMDDIVLYWLNDRGAVTGVEDVSLPQFSI 219
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
T + + STG++ L +IF L+R +GY++F TY+P+ LIV++SWVSFWI EA
Sbjct: 220 TNYATINKIEELSTGDYQRLSLIFQLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEATS 279
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 280 ARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLVMCFV 321
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR------- 234
K YD P G P + V + DSI E M Y ++ Q W+D RL+
Sbjct: 42 KGYDIRLRPSFGGAPLEIGIEVILASFDSISEVDMDYTITMYLNQYWRDERLQFIFNESL 101
Query: 235 -LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L EN + L + + +W PD+F N K +T N V LY + +++Y ++F
Sbjct: 102 DLGENRSVTTMTLTGAFAEKIWVPDTFLANDKNSFLHDITEKNKMVRLYGNGSLVYGMRF 161
>gi|390464123|ref|XP_002806936.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Callithrix jacchus]
gi|390464125|ref|XP_003733172.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Callithrix jacchus]
Length = 388
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 69 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 128
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 129 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 188
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 189 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 230
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 222 IFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHY 278
++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+ N
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRM 55
Query: 279 VWLYKDKTILYMVKFVFMA 297
+ L+ D T+LY ++ A
Sbjct: 56 IRLHPDGTVLYGLRITTTA 74
>gi|332256203|ref|XP_003277207.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Nomascus leucogenys]
gi|332256205|ref|XP_003277208.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Nomascus leucogenys]
Length = 388
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 69 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 128
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 129 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 188
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 189 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 230
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 222 IFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHY 278
++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+ N
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRM 55
Query: 279 VWLYKDKTILYMVKFVFMA 297
+ L+ D T+LY ++ A
Sbjct: 56 IRLHPDGTVLYGLRITTTA 74
>gi|300797159|ref|NP_001178249.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 3 [Homo
sapiens]
Length = 388
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 69 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 128
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 129 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 188
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 189 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 230
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 222 IFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHY 278
++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+ N
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRM 55
Query: 279 VWLYKDKTILYMVKFVFMA 297
+ L+ D T+LY ++ A
Sbjct: 56 IRLHPDGTVLYGLRITTTA 74
>gi|403306399|ref|XP_003943724.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Saimiri boliviensis boliviensis]
Length = 413
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 94 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 153
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 154 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 213
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 214 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 255
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 218 YAADIFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y ++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+
Sbjct: 22 YTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTV 76
Query: 275 PNHYVWLYKDKTILYMVKFVFMA 297
N + L+ D T+LY ++ A
Sbjct: 77 KNRMIRLHPDGTVLYGLRITTTA 99
>gi|332843341|ref|XP_003314620.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Pan troglodytes]
gi|397515749|ref|XP_003828108.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Pan paniscus]
gi|410305768|gb|JAA31484.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [Pan troglodytes]
Length = 402
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 83 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 142
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 143 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 202
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 203 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 244
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 218 YAADIFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y ++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+
Sbjct: 11 YTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTV 65
Query: 275 PNHYVWLYKDKTILYMVKFVFMA 297
N + L+ D T+LY ++ A
Sbjct: 66 KNRMIRLHPDGTVLYGLRITTTA 88
>gi|355692545|gb|EHH27148.1| hypothetical protein EGK_17280, partial [Macaca mulatta]
gi|355777888|gb|EHH62924.1| hypothetical protein EGM_15786, partial [Macaca fascicularis]
Length = 394
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 75 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 134
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 135 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 194
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 195 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 236
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 218 YAADIFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y ++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+
Sbjct: 3 YTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTV 57
Query: 275 PNHYVWLYKDKTILYMVKFVFMA 297
N + L+ D T+LY ++ A
Sbjct: 58 KNRMIRLHPDGTVLYGLRITTTA 80
>gi|332843344|ref|XP_003339315.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Pan
troglodytes]
gi|332843346|ref|XP_003314621.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
4 [Pan troglodytes]
gi|397515751|ref|XP_003828109.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Pan paniscus]
Length = 388
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 69 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 128
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 129 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 188
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 189 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 230
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 222 IFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHY 278
++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+ N
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRM 55
Query: 279 VWLYKDKTILYMVKFVFMA 297
+ L+ D T+LY ++ A
Sbjct: 56 IRLHPDGTVLYGLRITTTA 74
>gi|118150482|ref|NP_001071280.1| ligand-gated chloride channel homolog 3 precursor [Apis mellifera]
gi|110555512|gb|ABG75736.1| GABA-gated ion channel [Apis mellifera]
Length = 489
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W E P+ E+ ELP
Sbjct: 149 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAELP 207
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 208 QFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 267
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 268 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 313
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G+P +V +T+ D+I E +M Y ++ Q WKD RL + E
Sbjct: 48 YDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFSQE--EEV 105
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L D+ + +W PD+FF N K +T N V L D ++ Y ++F
Sbjct: 106 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRF 155
>gi|426378388|ref|XP_004055909.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
4 [Gorilla gorilla gorilla]
gi|426378390|ref|XP_004055910.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
5 [Gorilla gorilla gorilla]
Length = 388
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 69 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 128
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 129 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 188
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 189 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 230
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 222 IFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHY 278
++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+ N
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRM 55
Query: 279 VWLYKDKTILYMVKFVFMA 297
+ L+ D T+LY ++ A
Sbjct: 56 IRLHPDGTVLYGLRITTTA 74
>gi|383863330|ref|XP_003707134.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-like [Megachile rotundata]
Length = 508
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W E P+ E+ ELP
Sbjct: 149 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWK-ETPVRGVEEAELP 207
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 208 QFTIIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 267
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 268 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 313
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G+P +V +T+ D+I E +M Y ++ Q WKD RL + E
Sbjct: 48 YDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFSQE--EEV 105
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L D+ + +W PD+FF N K +T N V L D ++ Y ++F
Sbjct: 106 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRF 155
>gi|332256201|ref|XP_003277206.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Nomascus leucogenys]
Length = 402
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 83 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 142
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 143 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 202
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 203 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 244
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 218 YAADIFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y ++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+
Sbjct: 11 YTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTV 65
Query: 275 PNHYVWLYKDKTILYMVKFVFMA 297
N + L+ D T+LY ++ A
Sbjct: 66 KNRMIRLHPDGTVLYGLRITTTA 88
>gi|221044268|dbj|BAH13811.1| unnamed protein product [Homo sapiens]
Length = 388
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 69 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 128
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 129 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 188
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 189 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 230
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 222 IFFAQTWKDHR---LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHY 278
++F Q W+D R +P N+T + R+ + +W PD++F N K +T+ N
Sbjct: 1 MYFQQYWRDKRHAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRM 55
Query: 279 VWLYKDKTILYMVKFVFMA 297
+ L+ D T+LY ++ A
Sbjct: 56 IRLHPDGTVLYGLRITTTA 74
>gi|300797181|ref|NP_001178250.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 4 [Homo
sapiens]
gi|119578059|gb|EAW57655.1| gamma-aminobutyric acid (GABA) A receptor, beta 3, isoform CRA_c
[Homo sapiens]
Length = 402
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 83 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 142
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 143 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 202
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 203 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 244
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 218 YAADIFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y ++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+
Sbjct: 11 YTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTV 65
Query: 275 PNHYVWLYKDKTILYMVKFVFMA 297
N + L+ D T+LY ++ A
Sbjct: 66 KNRMIRLHPDGTVLYGLRITTTA 88
>gi|388895508|gb|AFK82276.1| AVR-14B subunit, partial [Teladorsagia circumcincta]
Length = 438
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TT D+ ++W + P+ + + LP +
Sbjct: 171 RLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKEQNPVQQKDGLRQSLPSFE 230
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++C V +L+R YYL YIP ++V++SWVSFW+ +A
Sbjct: 231 LQDVVTKYCTSKTNTGEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV+LGVT+LLT++TQ + + LPPVSY+KAVD ++ C
Sbjct: 291 PARVSLGVTTLLTMTTQASGINSKLPPVSYIKAVDVWIGVC 331
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP--ENMTSE---YRLL-- 246
G P +V ++ + + ID+ +M Y+A F + W D RL E+ ++E + +L
Sbjct: 64 GGPVLVTVNIYLRSISKIDDVNMEYSAQFTFREEWVDARLAYGRFEDESTEVPPFVVLAT 123
Query: 247 --EVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
D + +W PD+FF+N K + PN + ++KD +ILY V+
Sbjct: 124 SENADQSQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKDGSILYSVRL 172
>gi|348535498|ref|XP_003455237.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Oreochromis niloticus]
Length = 555
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + ++ ++IELPQ +
Sbjct: 184 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGVDRIELPQFSI 243
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 244 VDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 303
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 304 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 345
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 209 DSIDENSMTYAADIFFAQTWKDHRLRLPE---NMTSEYRLLEVDWLKNMWRPDSFFKNAK 265
DSI + + Y ++F Q W+D RL E N+T + R+ + +W PD++F N K
Sbjct: 103 DSILKMDLDYTLTMYFQQAWRDKRLSYSEIAYNLTLDNRVAD-----QLWVPDTYFLNDK 157
Query: 266 AVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T+ N + L+ D T+LY ++ A
Sbjct: 158 KSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 189
>gi|426378386|ref|XP_004055908.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Gorilla gorilla gorilla]
Length = 440
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 121 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 180
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 181 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 240
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 241 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 282
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 13 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 72
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 73 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 126
>gi|281353485|gb|EFB29069.1| hypothetical protein PANDA_010809 [Ailuropoda melanoleuca]
Length = 320
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 1 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 60
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 61 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 120
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 121 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 162
>gi|38491401|gb|AAR21855.1| GluCl alpha 3 [Cooperia oncophora]
Length = 438
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TT D+ ++W + P+ + + LP +
Sbjct: 171 RLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKEQNPVQQKDGLRQSLPSFE 230
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++C V +L+R YYL YIP ++V++SWVSFW+ +A
Sbjct: 231 LQDVVTKYCTSKTNTGEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV+LGVT+LLT++TQ + + LPPVSY+KAVD ++ C
Sbjct: 291 PARVSLGVTTLLTMTTQASGINSKLPPVSYIKAVDVWIGVC 331
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP--ENMTSE---YRLL-- 246
G P +V ++ + + ID+ +M Y+A F + W D RL E+ ++E + +L
Sbjct: 64 GGPVLVTVNIYLRSISKIDDVNMEYSAQFTFREEWVDARLAYGRFEDESTEVPPFVVLAT 123
Query: 247 --EVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
D + +W PD+FF+N K + PN + ++KD +ILY V+
Sbjct: 124 SENADQSQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKDGSILYSVRL 172
>gi|306480897|emb|CBX19419.1| glutamate-gated chloride channel alpha3B [Ostertagia ostertagi]
Length = 439
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TT D+ ++W + P+ + + LP +
Sbjct: 171 RLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKEQNPVQQKDGLRQSLPSFE 230
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++C V +L+R YYL YIP ++V++SWVSFW+ +A
Sbjct: 231 LQDVVTKYCTSKTNTGEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV+LGVT+LLT++TQ + + LPPVSY+KAVD ++ C
Sbjct: 291 PARVSLGVTTLLTMTTQASGINSKLPPVSYIKAVDVWIGVC 331
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP--ENMTSE---YRLL-- 246
G P +V ++ + + ID+ +M Y+A F + W D RL E+ ++E + +L
Sbjct: 64 GGPVLVTVNIYLRSISKIDDVNMEYSAQFTFREEWVDARLAYGRFEDESTEVPPFVVLAT 123
Query: 247 --EVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
D + +W PD+FF+N K + PN + ++KD +ILY V+
Sbjct: 124 SENADQSQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKDGSILYSVRL 172
>gi|297374629|emb|CBM40946.1| GluClalpha3B protein [Cooperia oncophora]
Length = 424
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TT D+ ++W + P+ + + LP +
Sbjct: 171 RLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKEQNPVQQKDGLRQSLPSFE 230
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++C V +L+R YYL YIP ++V++SWVSFW+ +A
Sbjct: 231 LQDVVTKYCTSKTNTGEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV+LGVT+LLT++TQ + + LPPVSY+KAVD ++ C
Sbjct: 291 PARVSLGVTTLLTMTTQASGINSKLPPVSYIKAVDVWIGVC 331
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP--ENMTSE---YRLL-- 246
G P +V ++ + + ID+ +M Y+A F + W D RL E+ ++E + +L
Sbjct: 64 GGPVLVTVNIYLRSISKIDDVNMEYSAQFTFREEWVDARLAYGRFEDESTEVPPFVVLAT 123
Query: 247 --EVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
D + +W PD+FF+N K + PN + ++KD +ILY V+
Sbjct: 124 SENADQSQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKDGSILYSVRL 172
>gi|189520298|ref|XP_695300.3| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
isoform 2 [Danio rerio]
Length = 471
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W E + +IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGETAVTGVSRIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V + V +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYTGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|150247144|ref|NP_001092850.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Bos
taurus]
gi|146186859|gb|AAI40687.1| LOC529593 protein [Bos taurus]
Length = 472
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|189067536|dbj|BAG37715.1| unnamed protein product [Homo sapiens]
Length = 473
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCLV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|55829087|gb|AAV66543.1| beta subunit-GABA-A-gated chloride channel [Anopheles gambiae]
Length = 459
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W P+ E+ ELP
Sbjct: 130 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYW-RSTPIRGVEEAELP 188
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 189 QFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 248
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 249 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 294
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 19/129 (14%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR--------- 234
YD P G+P V +T+ D+I E +M Y ++ Q WKD RL
Sbjct: 8 YDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFNAFALWGD 67
Query: 235 ----------LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKD 284
+ ++ ++ L D+ + +W PD+FF N K +T N V L D
Sbjct: 68 NQKDQTGEIMIEDDGANDVITLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLAGD 127
Query: 285 KTILYMVKF 293
+ Y ++F
Sbjct: 128 GAVTYGMRF 136
>gi|3850612|emb|CAA77131.1| GBR-2 protein [Ascaris suum]
Length = 379
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TTDD+ ++W P+ E + LP +
Sbjct: 110 RLSLVLSCPMSLEYYPLDRQTCLIDLASYAYTTDDIKYEWKLTNPIQQKEGLRQSLPSFE 169
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++C V +L+R YYL YIP ++V++SWVSFW+ +A
Sbjct: 170 LQDVLTDYCTSKTNTGEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAV 229
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV+LGVT+LLT++TQ + + LPPVSY+KAVD ++ C
Sbjct: 230 PARVSLGVTTLLTMTTQASGINSKLPPVSYIKAVDVWIGVC 270
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENM---------T 240
G P +V ++ + + ID+ +M Y+A F + W+D RL EN T
Sbjct: 3 GGPVLVSVNIYLRSISKIDDVNMEYSAQFTFREEWRDARLAYERFADENTQVPPFVVLAT 62
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
SE + D + +W PD+FF+N K + PN + +++D ILY V+
Sbjct: 63 SE----QADLTQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHQDGQILYSVRL 111
>gi|344298009|ref|XP_003420687.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Loxodonta africana]
Length = 474
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 155 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 214
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 215 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 274
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 275 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 316
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 47 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 106
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 107 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 160
>gi|347963038|ref|XP_311123.3| AGAP000038-PA [Anopheles gambiae str. PEST]
gi|333467389|gb|EAA06524.3| AGAP000038-PA [Anopheles gambiae str. PEST]
Length = 471
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W P+ E+ ELP
Sbjct: 142 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYW-RSTPIRGVEEAELP 200
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 201 QFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 260
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 261 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 306
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 23/152 (15%)
Query: 161 MSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAA 220
M+A + + + T + IL + YD P G+P V +T+ D+I E +M Y
Sbjct: 1 MAAGRLENVTQTISRIL----EGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTI 56
Query: 221 DIFFAQTWKDHRLR-------------------LPENMTSEYRLLEVDWLKNMWRPDSFF 261
++ Q WKD RL + ++ ++ L D+ + +W PD+FF
Sbjct: 57 TMYLNQYWKDERLAFNAFALWGDNQKDQTGEIMIEDDGANDVITLSGDFAEKIWVPDTFF 116
Query: 262 KNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
N K +T N V L D + Y ++F
Sbjct: 117 ANDKNSFLHDVTERNKLVRLAGDGAVTYGMRF 148
>gi|395527076|ref|XP_003765677.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Sarcophilus harrisii]
Length = 472
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|189099244|gb|ACD76859.1| gamma-aminobutyric acid A receptor beta 3 [Felis catus]
Length = 408
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 109 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWHGGDKAVTGVERIELPQFSI 168
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 169 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 228
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 229 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 270
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 1 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 60
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 61 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 114
>gi|395855530|ref|XP_003800209.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Otolemur garnettii]
Length = 473
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|332843337|ref|XP_003314618.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Pan troglodytes]
Length = 473
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|148689912|gb|EDL21859.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_a [Mus musculus]
Length = 472
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
>gi|197098146|ref|NP_001124777.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Pongo
abelii]
gi|55725861|emb|CAH89710.1| hypothetical protein [Pongo abelii]
gi|55725875|emb|CAH89717.1| hypothetical protein [Pongo abelii]
Length = 473
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|195158090|ref|XP_002019927.1| GL12670 [Drosophila persimilis]
gi|194116518|gb|EDW38561.1| GL12670 [Drosophila persimilis]
Length = 458
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 100/161 (62%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA--A 123
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAKHV 275
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
P +T VT+L +++TQ + ASLPPVSY KA+D + C
Sbjct: 276 PVYITTCVTTLSSMATQTSGINASLPPVSYTKAIDVWTGVC 316
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG--QPTIVY 200
Y A+ F S C+ S + + ++ K+ D ++RP G P IV
Sbjct: 6 YFWAIFYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAIVR 65
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ V + +I + M Y+ + F + W D RL+ +++ + L + +W PD F
Sbjct: 66 INLFVRSIMTISDIKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLF 124
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 169
>gi|402873751|ref|XP_003900725.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Papio anubis]
Length = 473
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|386781493|ref|NP_001247631.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Macaca
mulatta]
gi|402873749|ref|XP_003900724.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Papio anubis]
gi|380811404|gb|AFE77577.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 1 precursor
[Macaca mulatta]
Length = 473
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|4503867|ref|NP_000805.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 1 precursor
[Homo sapiens]
gi|120773|sp|P28472.1|GBRB3_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|182925|gb|AAA52511.1| GABA-alpha receptor beta-3 subunit [Homo sapiens]
gi|60654677|gb|AAX31903.1| gamma-aminobutyric acid [synthetic construct]
gi|60654679|gb|AAX31904.1| gamma-aminobutyric acid [synthetic construct]
gi|123980366|gb|ABM82012.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
gi|261861478|dbj|BAI47261.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
Length = 473
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|148744735|gb|AAI42873.1| Unknown (protein for IMAGE:7452885) [Danio rerio]
Length = 427
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + E+IELPQ +
Sbjct: 155 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGNHAVTGVERIELPQFSI 214
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 215 VDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 274
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 275 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 316
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 47 KGYDIRLRPDFGGPPVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLN 106
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 107 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 160
>gi|426378384|ref|XP_004055907.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Gorilla gorilla gorilla]
Length = 473
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|426378382|ref|XP_004055906.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Gorilla gorilla gorilla]
Length = 473
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|6679911|ref|NP_032097.1| gamma-aminobutyric acid receptor subunit beta-3 isoform a precursor
[Mus musculus]
gi|52000955|sp|P63079.1|GBRB3_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|52000959|sp|P63080.1|GBRB3_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|755159|gb|AAB60502.1| GABA-benzodiazepine receptor beta-3 subunit [Mus musculus]
gi|26333025|dbj|BAC30230.1| unnamed protein product [Mus musculus]
gi|74181039|dbj|BAE27794.1| unnamed protein product [Mus musculus]
gi|149031467|gb|EDL86447.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_a [Rattus norvegicus]
gi|151555297|gb|AAI48599.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3
[synthetic construct]
gi|157169890|gb|AAI53160.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3
[synthetic construct]
gi|226316|prf||1506343B GABA A receptor beta
gi|1095220|prf||2108275C GABA-A receptor:SUBUNIT=beta3
Length = 473
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|395855528|ref|XP_003800208.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Otolemur garnettii]
Length = 473
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|114656020|ref|XP_510254.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
6 [Pan troglodytes]
Length = 475
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|149031468|gb|EDL86448.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_b [Rattus norvegicus]
Length = 473
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|306448445|gb|ADM88005.1| ligand-gated chloride channel-like3 protein [Bombyx mori]
Length = 409
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W P+ E ELP
Sbjct: 78 ITYGMRFTATLACMMDLHYYPLDSQNCTVEIESYGYTASDVVMYWK-NTPVRGVEDAELP 136
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ ++T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 137 QFTILGHETNDRKEKLATGVYQRLSLSFKLRRNIGYFVFQTYLPSILIVMLSWVSFWINH 196
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 197 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 242
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 208 LDSIDENSMTYAADIFFAQTWKDHRL--RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAK 265
D+I E +M Y ++ Q WKD RL LPE E L D+ +W PD+FF N K
Sbjct: 1 FDAISEVNMDYTITLYLNQYWKDERLAFGLPE----EVLTLSGDFADKIWVPDTFFANDK 56
Query: 266 AVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+T N V L D +I Y ++F
Sbjct: 57 NSFLHDVTERNKLVRLGGDGSITYGMRF 84
>gi|332843339|ref|XP_003314619.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Pan troglodytes]
Length = 473
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|301772918|ref|XP_002921880.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Ailuropoda melanoleuca]
Length = 473
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|12548788|ref|NP_068712.1| gamma-aminobutyric acid receptor subunit beta-3 isoform 2 precursor
[Homo sapiens]
Length = 473
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|149691051|ref|XP_001493098.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
1 [Equus caballus]
Length = 473
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|84662774|ref|NP_001033790.1| gamma-aminobutyric acid receptor subunit beta-3 isoform b precursor
[Mus musculus]
gi|26350247|dbj|BAC38763.1| unnamed protein product [Mus musculus]
gi|148689913|gb|EDL21860.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 3, isoform
CRA_b [Mus musculus]
Length = 473
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|426378392|ref|XP_004055911.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
6 [Gorilla gorilla gorilla]
Length = 475
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|156717244|ref|NP_001096164.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 precursor
[Xenopus (Silurana) tropicalis]
gi|134025815|gb|AAI36050.1| gabrb3 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWLGGDNAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ +K + V++TG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 MDHKLVSKNVVFATGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGSPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYTGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|341887122|gb|EGT43057.1| CBN-GGR-2 protein [Caenorhabditis brenneri]
Length = 534
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+++ + C +N +P D+Q C L++ S ++TT+ L+ +W E P+ + I + + +V
Sbjct: 146 RISMVVVCTLNLEKWPLDSQRCHLRILSYAYTTEQLVIKWKEEEPITRNPNIAMSDMHIV 205
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
C YSTG ++C+ F +KR + +++ +Y+PT LIV++SW SFW+ EA PA
Sbjct: 206 DLYPGLCDGNYSTGTWSCVTAEFFVKREITHHVMQSYVPTTLIVVISWFSFWLDVEAVPA 265
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+L +T+LLTLSTQ ++ +LP VSY+KA+D +M AC
Sbjct: 266 RVSLAITTLLTLSTQANAARMALPEVSYMKAIDVWMGAC 304
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 7/136 (5%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQP--TIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKD 230
+++L ++YD PP + + T+V + + G+ S +M + D++F Q W+D
Sbjct: 27 LDNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGMSSFRTQTMDFQLDVYFQQFWRD 86
Query: 231 HRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYM 290
RL N T + + L MW PD +F NA+ F +T PN VW+ D +ILY
Sbjct: 87 PRL--AHNETRRVLVKDKAVLHKMWHPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYD 144
Query: 291 VKFVFMALMEYCLVNI 306
+ ++++ C +N+
Sbjct: 145 TR---ISMVVVCTLNL 157
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 348 QQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+Q Q++ R RA ID+ SR FP+ F I N TYWI +
Sbjct: 489 KQIQKHKKIAGRNRAKKIDQTSRWTFPLTFVIFNLTYWIYY 529
>gi|292615077|ref|XP_002662540.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Danio rerio]
Length = 481
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W E + +IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGETAVTGVSRIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V + V +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYTGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|348513619|ref|XP_003444339.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oreochromis niloticus]
Length = 475
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W E + ++IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGETAVTGVKRIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V + V +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|296475589|tpg|DAA17704.1| TPA: gamma-aminobutyric acid (GABA) A receptor, beta 3 [Bos taurus]
Length = 392
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|410960768|ref|XP_003986959.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Felis
catus]
Length = 447
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 128 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 187
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 188 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 247
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 248 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 289
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 188 RPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPENMTSEYR 244
R P G P V ++ + +D + E +M Y ++F Q W+D RL +P N+T + R
Sbjct: 26 RRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNR 85
Query: 245 LLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 86 VAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 133
>gi|126337134|ref|XP_001362985.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Monodelphis domestica]
Length = 473
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|194206378|ref|XP_001493125.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
2 [Equus caballus]
Length = 473
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|53765741|gb|AAU93411.1| testis gamma-aminobutyric acid receptor subunit beta 3 [Rattus
norvegicus]
Length = 471
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 152 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 211
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ +I I+SWVSFWI +A+
Sbjct: 212 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSIMITILSWVSFWINYDASA 271
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 313
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 44 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 103
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 104 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 157
>gi|308511531|ref|XP_003117948.1| CRE-GGR-2 protein [Caenorhabditis remanei]
gi|308238594|gb|EFO82546.1| CRE-GGR-2 protein [Caenorhabditis remanei]
Length = 535
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+++ + C +N +P D+Q C L++ S ++TT+ L+ +W E P+ + I + + +V
Sbjct: 146 RISMVVVCTLNLEKWPLDSQRCHLRILSYAYTTEQLVIKWKEEEPITRNPNIAMSDMHIV 205
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
C YSTG ++C+ F +KR + +++ +Y+PT LIV++SW SFW+ EA PA
Sbjct: 206 DLYPGLCDGNYSTGTWSCVTAEFFVKREITHHVMQSYVPTTLIVVISWFSFWLDVEAVPA 265
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+L +T+LLTLSTQ ++ +LP VSY+KA+D +M AC
Sbjct: 266 RVSLAITTLLTLSTQANAARMALPEVSYMKAIDVWMGAC 304
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 7/136 (5%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQP--TIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKD 230
+++L ++YD PP + + T+V + + G+ S +M + D++F Q W+D
Sbjct: 27 LDNLLNAGREVYDNQSPPVQHDKEEVTVVELAMYIEGMSSFRTQTMDFQLDVYFQQFWRD 86
Query: 231 HRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYM 290
RL N T + + L MW PD +F NA+ F +T PN VW+ D +ILY
Sbjct: 87 PRL--AHNETRRVLVKDKAVLHKMWHPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYD 144
Query: 291 VKFVFMALMEYCLVNI 306
+ ++++ C +N+
Sbjct: 145 TR---ISMVVVCTLNL 157
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 348 QQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+Q Q++ R RA ID+ SR FP+ F I N TYWI +
Sbjct: 490 KQIQKHKKIAGRNRAKKIDQTSRWIFPLTFVIFNLTYWIYY 530
>gi|327268132|ref|XP_003218852.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Anolis carolinensis]
Length = 413
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 97 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSI 156
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+ K + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 157 VEYKLVSRNVVFATGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 216
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 217 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 258
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 218 YAADIFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y ++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+
Sbjct: 25 YTLTMYFQQYWRDKRLAYAGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTV 79
Query: 275 PNHYVWLYKDKTILYMVKFVFMA 297
N + L+ D T+LY ++ A
Sbjct: 80 KNRMIRLHPDGTVLYGLRITTTA 102
>gi|444908113|emb|CCN97893.1| glutamate-gated chloride channel 3, partial [Cooperia oncophora]
Length = 492
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 101/161 (62%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M+ YP D Q C + + S ++T D+ ++W P+ + + + L Q
Sbjct: 184 RISLVLSCPMHLQYYPMDVQTCLIDLASYAYTDTDIEYRWKETDPVQLKDGLNSSLLSFQ 243
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL + L+R+ YYL YIP+ ++VI+SWVSFW+ A
Sbjct: 244 LNNVSTTYCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDRTAV 303
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ AC
Sbjct: 304 PARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGAC 344
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 182 KLYD-KMRPP------KKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL- 233
K YD ++RPP K P +V ++ + + ID+ +M Y+ + F ++W D RL
Sbjct: 67 KGYDWRVRPPGINLTVKGSHGPVVVSVNMLIRSISKIDDVNMEYSVQLTFRESWVDGRLA 126
Query: 234 -RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
LP + ++ +L + +W PDSFF+N K + PN + ++KD ILY V+
Sbjct: 127 YGLPGDNKPDFLILTAG--QQIWMPDSFFQNEKQAQKHMIDKPNVLIRIHKDGQILYSVR 184
Query: 293 F 293
Sbjct: 185 I 185
>gi|242021134|ref|XP_002431001.1| Gaba-gated chloride channel, putative [Pediculus humanus corporis]
gi|212516225|gb|EEB18263.1| Gaba-gated chloride channel, putative [Pediculus humanus corporis]
Length = 467
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W + P+ EK +LP
Sbjct: 134 ITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWK-DTPVRGVEKAQLP 192
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 193 QFTIIGYETNDRKESLATGIYQRLSLSFKLQRNIGYFIFQTYLPSILIVMLSWVSFWINH 252
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 253 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 298
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G P V +T+ DSI E +M Y ++ Q WKD RL + E
Sbjct: 32 YDIRLRPNFGGDPLYVGMDMTIASFDSISEVNMDYTITMYLDQYWKDERLAFSTD--DET 89
Query: 244 RLLEVDWLKNMWRPDSFFKNAK-AVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L D+ + +W PD+FF N K F+ + PN V L D +I Y ++F
Sbjct: 90 LTLAGDFAEKIWVPDTFFANDKNRYGFRFLVKPNKLVRLNGDGSITYGMRF 140
>gi|341899108|gb|EGT55043.1| hypothetical protein CAEBREN_09119 [Caenorhabditis brenneri]
Length = 510
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 109/163 (66%), Gaps = 4/163 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD--EKIELPQLQ 63
RLT LSC+MN +P D+Q C++++ES +TT +++ +W+ PLAV E+ ++PQ
Sbjct: 124 RLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMKWN--YPLAVHGVEQADVPQFT 181
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T D +TG++ L ++F L+R +GY++F TY+P LIV++SWVSFWI EA
Sbjct: 182 ITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEAT 241
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + SLP +SY+K++D ++ C V
Sbjct: 242 SARVALGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFV 284
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 47/110 (42%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G ++ + + DSI E M Y ++ Q W D RLR + +
Sbjct: 16 YDIRLRPGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWNNEIPIDE 75
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L ++ +N+W PD+F N K +T N + + D + Y ++
Sbjct: 76 MTLSGEFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRL 125
>gi|326913724|ref|XP_003203184.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Meleagris gallopavo]
Length = 455
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 133 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSI 192
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+ + + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 193 VEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 252
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 253 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 294
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 218 YAADIFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y ++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+
Sbjct: 61 YTLTMYFQQYWRDKRLAYAGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTV 115
Query: 275 PNHYVWLYKDKTILYMVKFVFMA 297
N + L+ D T+LY ++ A
Sbjct: 116 KNRMIRLHPDGTVLYGLRITTTA 138
>gi|71996759|ref|NP_499661.2| Protein GAB-1 [Caenorhabditis elegans]
gi|74958176|sp|O18276.3|GBRB_CAEEL RecName: Full=Gamma-aminobutyric acid receptor subunit beta;
AltName: Full=GABA(A) receptor subunit beta; Flags:
Precursor
gi|29603354|emb|CAB07719.3| Protein GAB-1 [Caenorhabditis elegans]
Length = 550
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 109/163 (66%), Gaps = 4/163 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD--EKIELPQLQ 63
RLT LSC+MN +P D+Q C++++ES +TT +++ +W+ PLAV E+ ++PQ
Sbjct: 173 RLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMKWN--YPLAVHGVEQADVPQFT 230
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T D +TG++ L ++F L+R +GY++F TY+P LIV++SWVSFWI EA
Sbjct: 231 ITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEAT 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + SLP +SY+K++D ++ C V
Sbjct: 291 SARVALGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFV 333
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%)
Query: 190 PKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVD 249
P G ++ + + DSI E M Y ++ Q W D RLR + + L +
Sbjct: 71 PGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDEMTLSGE 130
Query: 250 WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+ +N+W PD+F N K +T N + + D + Y ++
Sbjct: 131 FSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRL 174
>gi|351701085|gb|EHB04004.1| Gamma-aminobutyric acid receptor subunit beta-3 [Heterocephalus
glaber]
Length = 501
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 69 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDTAVTGVERIELPQFSI 128
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 129 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 188
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 189 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 230
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 11/88 (12%)
Query: 222 IFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHY 278
++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+ N
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRM 55
Query: 279 VWLYKDKTILYMVKFVFMALMEYCLVNI 306
+ L+ D T+LY ++ A C++++
Sbjct: 56 IRLHPDGTVLYGLRITTTAA---CMMDL 80
>gi|47217916|emb|CAG06522.1| unnamed protein product [Tetraodon nigroviridis]
Length = 458
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W E + +IELPQ +
Sbjct: 128 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGESAVTGVTRIELPQFSI 187
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 188 VDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 247
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 248 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 289
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR---LRLPEN 238
K YD P G P V + V +D + E +M Y ++F Q W+D R L +P N
Sbjct: 20 KGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYLGIPLN 79
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 80 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 133
>gi|432098878|gb|ELK28373.1| Gamma-aminobutyric acid receptor subunit beta-2 [Myotis davidii]
Length = 473
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD-EKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W E KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGEDKAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 58/159 (36%), Gaps = 61/159 (38%)
Query: 293 FVFMALMEYCLVNIVL---GDSDLPKPPE--PAKQDKIF--------------------- 326
FVFMAL+EY LVN + G K E A DK+
Sbjct: 315 FVFMALLEYALVNYIFFGRGPQRQKKAAEKASANSDKMRLDVNKMDPHENILLSTLEIKN 374
Query: 327 ELAAKENARLL-------------------TGQPMIPPNHQQAQRNLAQ---RARTRA-- 362
E+A E L G P +R++AQ R R RA
Sbjct: 375 EMATSEAVMGLGDPRSTMLAYDAANIQYRKAGLPRHTFGRNALERHVAQKKSRLRRRASQ 434
Query: 363 ----------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
+N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 435 LKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 473
>gi|402873753|ref|XP_003900726.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 isoform
3 [Papio anubis]
Length = 529
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 210 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 269
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 270 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 329
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 330 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 371
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 102 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 161
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 162 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 215
>gi|307189537|gb|EFN73914.1| Gamma-aminobutyric acid receptor subunit beta-like [Camponotus
floridanus]
Length = 404
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W E P+ ++ ELP
Sbjct: 64 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWK-ETPVRGVKEAELP 122
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 123 QFTIIGYETNDRKETLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 182
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 183 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 228
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 222 IFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWL 281
++ Q WKD RL E L D+ + +W PD+FF N K +T N + L
Sbjct: 1 MYLNQYWKDERLAFSHE--GEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLIRL 58
Query: 282 YKDKTILYMVKF 293
D ++ Y ++F
Sbjct: 59 SGDGSVTYGMRF 70
>gi|449483363|ref|XP_002194694.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3
[Taeniopygia guttata]
Length = 443
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 121 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSI 180
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+ + + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 181 VEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 240
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 241 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 282
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 13 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLN 72
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 73 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 126
>gi|345324528|ref|XP_001505697.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3, partial
[Ornithorhynchus anatinus]
Length = 470
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 149 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDSAVTGVERIELPQFSI 208
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+ + + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 209 VEYRLVSKNVVFATGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 268
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 269 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 310
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPENMT 240
YD P G P V + + +D + E +M Y ++F Q W+D RL +P N+T
Sbjct: 43 YDIRLRPDFGGPPVCVGMSIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLNLT 102
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 103 LDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNSMIRLHPDGTVLYGLRITTTA 154
>gi|443685518|gb|ELT89100.1| hypothetical protein CAPTEDRAFT_216689 [Capitella teleta]
Length = 426
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 109/162 (67%), Gaps = 3/162 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD---EKIELPQL 62
R+ L+LSC+M + +P D Q+CS+++ S S+ D++I W AV E LPQ
Sbjct: 121 RMNLRLSCSMYLLHFPLDYQDCSIKISSYSYDLDNMILAWHDNGDGAVQVHTEDFNLPQF 180
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+L+ + D +Q +TG+F+ L+ F LKR++G+Y+ TYIP+ LIV +SWVSFW+ +A
Sbjct: 181 ELLGIEYDDFTQNLTTGSFSILQARFSLKRQVGFYILQTYIPSILIVALSWVSFWVNKDA 240
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR+TLGVT++LT++TQ + S+++ VSY KA+D + + C
Sbjct: 241 VPARITLGVTTVLTMTTQLSTSRSNTMKVSYPKALDVWYAFC 282
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 190 PKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVD 249
P G P V + +DE +M + +I+F Q W D RL E++ + +
Sbjct: 21 PDIYGSPLKVKCDFFIEDFGPVDEVTMEFGLEIYFRQRWHDPRLAYTESL--PHIAIPSH 78
Query: 250 WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+++ +W PD FF N K+ + T+ PN + ++ + + Y +
Sbjct: 79 YMQQIWIPDLFFPNEKSGSIHTVLYPNQVIKIFPEGLVRYSAR 121
>gi|444908117|emb|CCN97895.1| glutamate-gated chloride channel 6 [Cooperia oncophora]
Length = 444
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 109/166 (65%), Gaps = 3/166 (1%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE-- 58
M+SE RL+ SC M YP D Q C + + S + TTDD++++WD + P+ ++
Sbjct: 160 MSSE-RLSFTFSCPMYLQKYPMDEQNCDMLLASYAFTTDDIVYRWDEQNPIQYHAQLNTS 218
Query: 59 LPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWI 118
LP L +T +C+ +TG ++CL+ +F LKR +YL Y+P+ L+V++SWVSFW+
Sbjct: 219 LPNFSLQAARTGECTSTTTTGEYSCLKTMFTLKRMFRFYLAQIYLPSTLLVVVSWVSFWL 278
Query: 119 KPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ A PARVTLGVT+LLT++TQ A SLPPVSY+KAVD ++ C
Sbjct: 279 ERTAVPARVTLGVTTLLTMTTQAAAINNSLPPVSYIKAVDVWIGVC 324
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 157 VDAFMSACTVSSTSLTFNDILPE-DPKLYDK-MRPPKKEGQ----PTIVYFHVTVMGLDS 210
VDA +++ T SST + +I+ K YD+ +RPP ++ P +V + + + +
Sbjct: 22 VDAQVTS-TNSSTKMKPEEIMDVFISKSYDRRIRPPNRDSDGKNGPVLVSVNAYIRSMSN 80
Query: 211 IDENSMTYAADIFFAQTWKDHRLRLPENM--TSEYRLLEVDWLKNMWRPDSFFKNAKAVT 268
ID M Y + F Q W D RL + S + + + +W PD+FF N K
Sbjct: 81 IDFVRMQYGVQVTFRQFWHDPRLAYEQMFPGVSVPKFIIITEKNLIWTPDTFFLNEKQAH 140
Query: 269 FQTMTIPNHYVWLYKDKTILYMVKFVF 295
+ N + +Y + +++ + F
Sbjct: 141 RHEIDKLNLMIRIYANGSVMSSERLSF 167
>gi|8393390|ref|NP_058761.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Rattus
norvegicus]
gi|57802|emb|CAA33495.1| GABA(A) receptor beta-3 preprotein [Rattus sp.]
Length = 473
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ +I I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSIMITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|321478374|gb|EFX89331.1| hypothetical protein DAPPUDRAFT_310319 [Daphnia pulex]
Length = 540
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 104/161 (64%), Gaps = 1/161 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R T L+C M+ YP D Q C++++ES +T D++ W E P+ E ELPQ +V
Sbjct: 151 RFTTTLACMMDLHYYPLDHQNCTVEIESYGYTVSDVVMFW-RETPVVGVEDAELPQFTIV 209
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI EA A
Sbjct: 210 GYETNDRMEKLATGAYQRLSLSFRLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEATSA 269
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 270 RVALGITTVLTMTTISTGVRSSLPRISYVKAIDVYLVMCFV 310
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G P V +TV D+I E +M Y + Q W+D RL
Sbjct: 43 YDIRLRPDFGGDPLYVGMDITVASFDAISEVNMDYTLTLCLNQYWRDERLAFTHEKEDVV 102
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L D+ +W PD+FF N K +T N + L+ D +I Y ++F
Sbjct: 103 LTLSGDFSNKIWVPDTFFANDKNSFLHDVTERNTLMRLHGDGSIEYGLRF 152
>gi|51491195|emb|CAH18663.1| hypothetical protein [Homo sapiens]
Length = 529
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 210 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 269
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 270 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 329
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 330 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 371
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 102 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 161
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 162 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 215
>gi|327260677|ref|XP_003215160.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Anolis carolinensis]
Length = 511
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+ K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 444 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 503
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 504 VYWLYYVN 511
>gi|268570843|ref|XP_002640852.1| C. briggsae CBR-GAB-1 protein [Caenorhabditis briggsae]
Length = 501
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 109/163 (66%), Gaps = 4/163 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD--EKIELPQLQ 63
RLT LSC+MN +P D+Q C++++ES +TT +++ +W+ PLAV E+ ++PQ
Sbjct: 135 RLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMKWN--YPLAVHGVEQADVPQFT 192
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T D +TG++ L ++F L+R +GY++F TY+P LIV++SWVSFWI EA
Sbjct: 193 ITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEAT 252
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + SLP +SY+K++D ++ C V
Sbjct: 253 SARVALGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFV 295
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 47/110 (42%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G ++ + + DSI E M Y ++ Q W D RLR + +
Sbjct: 27 YDIRLRPGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDE 86
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L ++ +N+W PD+F N K +T N + + D + Y ++
Sbjct: 87 MTLSGEFSQNIWVPDTFLANDKHSYLHEVTERNKMLRVNVDGKVAYGMRL 136
>gi|308498974|ref|XP_003111673.1| CRE-GAB-1 protein [Caenorhabditis remanei]
gi|308239582|gb|EFO83534.1| CRE-GAB-1 protein [Caenorhabditis remanei]
Length = 566
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 109/163 (66%), Gaps = 4/163 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD--EKIELPQLQ 63
RLT LSC+MN +P D+Q C++++ES +TT +++ +W+ PLAV E+ ++PQ
Sbjct: 173 RLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMKWN--YPLAVHGVEQADVPQFT 230
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T D +TG++ L ++F L+R +GY++F TY+P LIV++SWVSFWI EA
Sbjct: 231 ITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEAT 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + SLP +SY+K++D ++ C V
Sbjct: 291 SARVALGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFV 333
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%)
Query: 190 PKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVD 249
P G ++ + + DSI E M Y ++ Q W D RLR + + L +
Sbjct: 71 PGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDEMTLSGE 130
Query: 250 WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+ +N+W PD+F N K +T N + + D + Y ++
Sbjct: 131 FSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRL 174
>gi|340727433|ref|XP_003402048.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
[Bombus terrestris]
Length = 489
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W + P+ E+ ELP
Sbjct: 149 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWK-QTPVRGVEEAELP 207
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 208 QFTIIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 267
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 268 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 313
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G+P +V +T+ D+I E +M Y ++ Q WKD RL + E
Sbjct: 48 YDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFSQE--EEV 105
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L D+ + +W PD+FF N K +T N V L D ++ Y ++F
Sbjct: 106 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRF 155
>gi|2815250|emb|CAA74623.1| GBR-2B protein [Haemonchus contortus]
Length = 438
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TT D+ ++W + P+ + + LP +
Sbjct: 171 RLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKEQNPVQQKDGLRQSLPSFE 230
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++C V +L+R YYL YIP +++++SWVSFW+ +A
Sbjct: 231 LQDVVTKYCTSKTNTGEYSCARVKLLLRREYSYYLIQLYIPCIMLLVVSWVSFWLDKDAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV+LGVT+LLT++TQ + + LPPVSY+KAVD ++ C
Sbjct: 291 PARVSLGVTTLLTMTTQASGINSKLPPVSYIKAVDVWIGVC 331
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP--ENMTSE---YRLL-- 246
G P +V ++ + + ID+ +M Y+A F + W D RL E+ ++E + +L
Sbjct: 64 GGPVLVTVNIYLRSISKIDDVNMEYSAHFTFREEWVDARLAYGRFEDESTEVPPFVVLAT 123
Query: 247 --EVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
D + +W PD+FF+N K + PN + ++KD +ILY V+
Sbjct: 124 SENADQSQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKDGSILYSVRL 172
>gi|350423047|ref|XP_003493368.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-like
[Bombus impatiens]
Length = 489
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W + P+ E+ ELP
Sbjct: 149 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWK-QTPVRGVEEAELP 207
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 208 QFTIIGYETNDRKERLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 267
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 268 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 313
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G+P +V +T+ D+I E +M Y ++ Q WKD RL + E
Sbjct: 48 YDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFSQE--EEV 105
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L D+ + +W PD+FF N K +T N V L D ++ Y ++F
Sbjct: 106 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRF 155
>gi|327260675|ref|XP_003215159.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Anolis carolinensis]
Length = 474
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+ K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 56/167 (33%), Gaps = 76/167 (45%)
Query: 293 FVFMALMEYCLVN-IVLGDSDLPKPPEPAKQDKIFELAAKENARLL-------------- 337
FVFMAL+EY LVN I G P +Q K E AA N L
Sbjct: 315 FVFMALLEYALVNYIFFGRG-------PQRQKKAAERAASANNEKLRMDVNKMDPHENIL 367
Query: 338 --------------------------------------TGQPMIPPNHQQAQRNLAQ--- 356
G P +R++AQ
Sbjct: 368 LSTLEIKNEMAASEAVIGLGDPRSTMLAYDTSSIQYRKAGLPRHSFGRNALERHVAQKKS 427
Query: 357 RARTRA------------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
R R RA +N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 428 RLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 474
>gi|410906073|ref|XP_003966516.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Takifugu rubripes]
Length = 482
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W E + +IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGESAVTGVTRIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR---LRLPEN 238
K YD P G P V + V +D + E +M Y ++F Q W+D R L +P N
Sbjct: 46 KGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYLGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|327260683|ref|XP_003215163.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 5 [Anolis carolinensis]
Length = 491
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+ K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 424 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 483
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 484 VYWLYYVN 491
>gi|405951683|gb|EKC19576.1| Glycine receptor subunit alphaZ1 [Crassostrea gigas]
Length = 446
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 105/164 (64%), Gaps = 4/164 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAVDEKIELPQLQ 63
RL L LSC MN +P D Q CS+++ES +TT L +W E +A+++ LPQ +
Sbjct: 156 RLALTLSCPMNLERFPFDKQTCSIKIESFGYTTSSLQLRWSNISENAVALNQT-SLPQFE 214
Query: 64 LVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ + + + GNF+ L+ F L+R +GYY+ YIP+ LIV++SWVSFW+ +
Sbjct: 215 VTGRNYSHRERTHRFRGNFSYLQADFHLERNIGYYMIQMYIPSLLIVLLSWVSFWLNVNS 274
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR++LGV S+LT++TQ + ASLP VSY+KA+D +M+ C V
Sbjct: 275 VPARISLGVLSVLTITTQSSAVNASLPRVSYIKAIDIWMTTCLV 318
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 175 DILPEDPKLYDKMRPPKKEGQP-TIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL 233
D+L D PP + T++ + V DSI+E SM + + W +H +
Sbjct: 35 DLLMRIRNYKDLENPPNYDSDKITVIEADLNVNSFDSINEASMDFKISVMLHLRWINHLI 94
Query: 234 R---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYM 290
T EY ++ + +W PD +F N K +F + N + L+++ T+ Y
Sbjct: 95 TNQFTSVKSTLEYVEMDATKMGRLWVPDLYFPNEKRSSFFNVMTDNKMMRLHRNGTVDYT 154
Query: 291 VKFVFMALMEYCLVNI 306
+ +AL C +N+
Sbjct: 155 TR---LALTLSCPMNL 167
>gi|327260679|ref|XP_003215161.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Anolis carolinensis]
Length = 481
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+ K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 58/167 (34%), Gaps = 69/167 (41%)
Query: 293 FVFMALMEYCLVNIVL---GDSDLPKPPEPAKQDK--------------IFELAAKENAR 335
FVFMAL+EY LVN + G K E A +F++ EN
Sbjct: 315 FVFMALLEYALVNYIFFGRGPQRQKKAAERAASANNEKLRMDVNKVTSCVFQMDPHENIL 374
Query: 336 LLT------------------------------------GQPMIPPNHQQAQRNLAQ--- 356
L T G P +R++AQ
Sbjct: 375 LSTLEIKNEMAASEAVIGLGDPRSTMLAYDTSSIQYRKAGLPRHSFGRNALERHVAQKKS 434
Query: 357 RARTRA------------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
R R RA +N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 435 RLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 481
>gi|348506723|ref|XP_003440907.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oreochromis niloticus]
Length = 482
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W E + +IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGESAVTGVTRIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKLVSKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V + V +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYVGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|327260681|ref|XP_003215162.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 4 [Anolis carolinensis]
Length = 528
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+ K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VEYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 461 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 520
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 521 VYWLYYVN 528
>gi|432849823|ref|XP_004066630.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oryzias latipes]
Length = 484
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W E + +IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGESAVTGVTRIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKLVSKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR---LRLPEN 238
K YD P G P V + V +D + E +M Y ++F Q W+D R L +P N
Sbjct: 46 KGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYLGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|348525972|ref|XP_003450495.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Oreochromis niloticus]
Length = 448
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD++F W+ + + +K+ELPQ +
Sbjct: 121 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWEGGDNAVTGVDKLELPQFSI 180
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V + +++TG + L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 181 VATQLVSKEVIFTTGAYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASA 240
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 241 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 282
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---N 238
K YD P G P +V + + +DSI E +M Y ++F Q+W+D RL E N
Sbjct: 13 KGYDIRLRPDFGGPPVVVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYGELNLN 72
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 73 LTLDNRVAD-----QLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 126
>gi|338713090|ref|XP_003362822.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Equus
caballus]
Length = 411
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 90 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 148
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 149 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 208
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 209 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 251
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 202 HVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPD 258
++ + +D + E +M Y ++F Q W+D RL +P N+T + R+ + +W PD
Sbjct: 2 NIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVAD-----QLWVPD 56
Query: 259 SFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 57 TYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 95
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 56/160 (35%), Gaps = 62/160 (38%)
Query: 293 FVFMALMEYCLVN-IVLGD-----------------------------------SDLPKP 316
FVFMAL+EY LVN I G S L
Sbjct: 252 FVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKMRLDVNKMDPHENILLSTLEIK 311
Query: 317 PEPAKQDKIFELAAKENARLL----------TGQPMIPPNHQQAQRNLAQ---RARTRA- 362
E A + + L + L G P +R++AQ R R RA
Sbjct: 312 NEMATSEAVMGLGDPRSTMLAYDASSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRAS 371
Query: 363 -----------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
+N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 372 QLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 411
>gi|410920808|ref|XP_003973875.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Takifugu rubripes]
Length = 474
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + +IELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDTAVTGVTRIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G+P V + V +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGRPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYVGIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
>gi|116735154|gb|ABK20343.1| glutamate-gated chloride channel [Parascaris equorum]
Length = 428
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 101/161 (62%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++ TDD+ ++W P+ E + LP +
Sbjct: 159 RLSLVLSCPMSLEYYPLDRQTCLIDLASYAYPTDDIKYEWKVTNPIQQKEGLRQSLPSFE 218
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++C V +L+R YYL YIP ++V++SWVSFW+ +A
Sbjct: 219 LQDVLTDYCTSKTNTGEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAV 278
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV+LGVT+LLT++TQ + + LPPVSY+KAVD ++ C
Sbjct: 279 PARVSLGVTTLLTMTTQASGINSKLPPVSYIKAVDVWIGVC 319
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 24/155 (15%)
Query: 159 AFMSACTVSSTSLTFNDILPEDPKLYD-KMRPPKKE------GQPTIVYFHVTVMGLDSI 211
A + + L +I+ K YD ++RP G P +V ++ + + I
Sbjct: 10 ALLGTFVYAKKKLKEQEIIQRTLKDYDWRVRPRGNNMSWPDTGGPVLVSVNIYLRSISKI 69
Query: 212 DENSMTYAADIFFAQTWKDHRLRLP----ENM---------TSEYRLLEVDWLKNMWRPD 258
D+ +M Y+A F + W+D RL EN TSE + D + +W PD
Sbjct: 70 DDVNMEYSAQFTFREEWRDARLAYERFADENTQVPPFVVLATSE----QADLTQQIWMPD 125
Query: 259 SFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+FF+N K + PN + +++D ILY V+
Sbjct: 126 TFFQNEKEARRHLIDKPNVLIRIHQDGQILYSVRL 160
>gi|256088847|ref|XP_002580535.1| Cys-loop ligand gated ion channel subunit [Schistosoma mansoni]
gi|360044035|emb|CCD81582.1| putative cys-loop ligand gated ion channel subunit [Schistosoma
mansoni]
Length = 511
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 182/392 (46%), Gaps = 52/392 (13%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQL--- 62
++T++++C M +P DTQEC + + S +T + + F W P+ + E +++ +
Sbjct: 156 KITMRMACQMELRTFPMDTQECDMNIGSYGYTLEQVSFVWRNISPVTLPENLQISEFDPP 215
Query: 63 QLVKNKTADCSQVYST--GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
++V+ DC+ YST G +TCL F L+R+LGY+L TYIP LI+++SW++FW+
Sbjct: 216 EVVR--AYDCTSGYSTSTGQYTCLNATFTLQRQLGYWLASTYIPNILIMVVSWLNFWVSL 273
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPED 180
EA PARV L + +LL + TQ +SLP VSY+KA+D + AC +TFN + +
Sbjct: 274 EAIPARVNLSLLTLLGVITQSTSYASSLPRVSYIKAIDIWTIAC------ITFNSGVLLE 327
Query: 181 PKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMT 240
+ + +K + + V V L + A + +AQ +
Sbjct: 328 FAIASHLARRQKVSE-----WQVEVRKLVRRELARWCSACQLQYAQRGPSALSAYSASSK 382
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALME 300
S ++ E + + A F P + + + V+ LM
Sbjct: 383 SNEKVSE------------YINSVAAAAFAIQNSP-----VLERPSPQMSVRLTKSGLMS 425
Query: 301 YCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENA--RLLTGQ--PMIPPNHQQAQRNLAQ 356
+ NI G SD + +EL ++A L T Q ++PPN Q + A
Sbjct: 426 --MANIKSGKSD------KVSKGVFYELVTNDSALTALDTTQKDALLPPNEPQRAKKPAS 477
Query: 357 RARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
++ ID +SR FP F + NC YW+ +
Sbjct: 478 MSK-----IDSYSRFVFPACFLLYNCFYWLYY 504
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 4/136 (2%)
Query: 162 SACTVSSTSLTFNDILPEDPKLYDK-MRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAA 220
S C V S ++I+ Y +RP + T+V +++V + S+D +M Y
Sbjct: 22 SKCAVLDASSIRDEIVETLFANYQSHVRPGELIRNTTVVTVYISVSAITSVDVRNMEYTI 81
Query: 221 DIFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNH 277
D+ Q W D RL ++ + ++ + + +W PD FF+N K MT N
Sbjct: 82 DMLLRQAWYDPRLAWDQIEKFKHYTKNIVSPVFKEKIWLPDLFFRNGKEGRLHKMTCENL 141
Query: 278 YVWLYKDKTILYMVKF 293
+ + + ILY K
Sbjct: 142 LIRIQPNGEILYSQKI 157
>gi|149726128|ref|XP_001503458.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Equus caballus]
Length = 512
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 445 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 504
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 505 VYWLYYVN 512
>gi|395817134|ref|XP_003782030.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Otolemur garnettii]
Length = 512
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 445 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 504
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 505 VYWLYYVN 512
>gi|269914159|ref|NP_001161733.1| gamma-aminobutyric acid receptor subunit beta-2 precursor
[Monodelphis domestica]
gi|395505008|ref|XP_003756838.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Sarcophilus harrisii]
Length = 512
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 445 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 504
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 505 VYWLYYVN 512
>gi|12548785|ref|NP_068711.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 1 precursor
[Homo sapiens]
gi|270047479|ref|NP_001161800.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Macaca
mulatta]
gi|114603228|ref|XP_001143894.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pan troglodytes]
gi|297676567|ref|XP_002816202.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Pongo abelii]
gi|332238939|ref|XP_003268660.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
5 [Nomascus leucogenys]
gi|397473114|ref|XP_003808065.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pan paniscus]
gi|403287104|ref|XP_003934797.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Saimiri boliviensis boliviensis]
gi|426350879|ref|XP_004042991.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Gorilla gorilla gorilla]
gi|292495010|sp|P47870.2|GBRB2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|292630773|sp|D1LYT2.1|GBRB2_MACMU RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|957259|gb|AAB33982.1| GABAA receptor beta 2 subunit [Homo sapiens]
gi|119581948|gb|EAW61544.1| gamma-aminobutyric acid (GABA) A receptor, beta 2, isoform CRA_b
[Homo sapiens]
gi|262527821|gb|ACY69096.1| gamma-aminobutyric acid A receptor beta 2 isoform 2 [Macaca
mulatta]
gi|351696717|gb|EHA99635.1| Gamma-aminobutyric acid receptor subunit beta-2 [Heterocephalus
glaber]
gi|355691818|gb|EHH27003.1| hypothetical protein EGK_17097 [Macaca mulatta]
gi|355750393|gb|EHH54731.1| hypothetical protein EGM_15623 [Macaca fascicularis]
gi|1095323|prf||2108344A GABA-A receptor:SUBUNIT=beta2
Length = 512
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 445 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 504
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 505 VYWLYYVN 512
>gi|350594447|ref|XP_003483903.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Sus
scrofa]
Length = 512
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 445 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 504
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 505 VYWLYYVN 512
>gi|46048684|ref|NP_990677.1| gamma-aminobutyric acid receptor subunit beta-3 precursor [Gallus
gallus]
gi|120772|sp|P19019.1|GBRB3_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3;
AltName: Full=GABA(A) receptor subunit beta-3; Flags:
Precursor
gi|62893|emb|CAA38147.1| precursor peptide [Gallus gallus]
Length = 476
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+ + + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|296192665|ref|XP_002744170.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Callithrix jacchus]
Length = 512
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 445 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 504
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 505 VYWLYYVN 512
>gi|300795409|ref|NP_001179689.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Bos
taurus]
Length = 519
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 160 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSI 219
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 220 VDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 279
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 280 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 321
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 193 EGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVD 249
G P V ++ + +D + E +M Y ++F Q W+D RL +P N+T + R+ +
Sbjct: 63 SGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVAD-- 120
Query: 250 WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 121 ---QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 165
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 452 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 511
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 512 VYWLYYVN 519
>gi|345799422|ref|XP_003434557.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Canis
lupus familiaris]
Length = 512
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 445 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 504
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 505 VYWLYYVN 512
>gi|410949391|ref|XP_003981406.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Felis
catus]
Length = 487
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 128 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 186
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 187 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 246
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 247 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 289
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLE 247
+T + R+ +
Sbjct: 105 LTLDNRVAD 113
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 420 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 479
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 480 VYWLYYVN 487
>gi|115532178|ref|NP_001024472.2| Protein GGR-2, isoform a [Caenorhabditis elegans]
gi|351049758|emb|CCD63812.1| Protein GGR-2, isoform a [Caenorhabditis elegans]
Length = 546
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+++ + C +N +P D+Q C L++ S ++TT+ L+ +W + P+ + I + + +V
Sbjct: 149 RISMVVVCTLNLEKWPLDSQRCHLRILSYAYTTEQLVIKWKEDEPITRNPNIAMSDMHIV 208
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
C YSTG ++C+ F +KR + +++ +Y+PT LIV++SW SFW+ EA PA
Sbjct: 209 DLYPGLCDGNYSTGTWSCVTAEFFVKREITHHVMQSYVPTTLIVVISWFSFWLDVEAVPA 268
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+L +T+LLTLSTQ ++ +LP VSY+KA+D +M AC
Sbjct: 269 RVSLAITTLLTLSTQANAARMALPEVSYMKAIDVWMGAC 307
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 7/136 (5%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQP--TIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKD 230
+++L ++YD PP + + T+V + + G+ S +M + D++F Q W+D
Sbjct: 30 LDNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGMSSFRTQTMDFQLDVYFQQFWRD 89
Query: 231 HRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYM 290
RL N T + + L MW+PD +F NA+ F +T PN VW+ D +ILY
Sbjct: 90 PRL--AHNETRRVLVKDKAVLHKMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYD 147
Query: 291 VKFVFMALMEYCLVNI 306
+ ++++ C +N+
Sbjct: 148 TR---ISMVVVCTLNL 160
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 348 QQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+Q Q++ R RA ID+ SR FP+ F I N TYWI +
Sbjct: 501 KQIQKHKKIAGRNRAKKIDQTSRWIFPLTFIIFNLTYWIYY 541
>gi|73953551|ref|XP_867140.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
8 [Canis lupus familiaris]
Length = 476
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 409 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 468
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 469 VYWLYYVN 476
>gi|6679909|ref|NP_032096.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Mus
musculus]
gi|6978869|ref|NP_037089.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Rattus
norvegicus]
gi|52000957|sp|P63138.1|GBRB2_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|57798|emb|CAA33494.1| GABA(A) receptor beta-2 preprotein [Rattus sp.]
gi|755157|gb|AAA79974.1| GABA-benzodiazepine receptor beta-2 subunit [Mus musculus]
gi|26355430|dbj|BAC41155.1| unnamed protein product [Mus musculus]
gi|46371157|gb|AAS90347.1| GABA-A receptor beta2 subunit [Rattus norvegicus]
gi|148700397|gb|EDL32344.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|148878001|gb|AAI45974.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|148878377|gb|AAI45976.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Mus
musculus]
gi|149052307|gb|EDM04124.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 2 [Rattus
norvegicus]
gi|1095219|prf||2108275B GABA-A receptor:SUBUNIT=beta2
Length = 474
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 153
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 56/160 (35%), Gaps = 62/160 (38%)
Query: 293 FVFMALMEYCLVN-IVLGD-----------------------------------SDLPKP 316
FVFMAL+EY LVN I G S L
Sbjct: 315 FVFMALLEYALVNYIFFGRGPQRQKKAAEKAANANNEKMRLDVNKMDPHENILLSTLEIK 374
Query: 317 PEPAKQDKIFELAAKENARLL----------TGQPMIPPNHQQAQRNLAQ---RARTRA- 362
E A + + L + L G P +R++AQ R R RA
Sbjct: 375 NEMATSEAVMGLGDPRSTMLAYDASSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRAS 434
Query: 363 -----------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
+N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 435 QLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 474
>gi|392583896|ref|NP_001254805.1| gamma-aminobutyric acid receptor subunit beta-2 precursor [Ovis
aries]
gi|387158480|gb|AFJ54221.1| gamma-aminobutyric acid A receptor [Ovis aries]
Length = 474
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 56/160 (35%), Gaps = 62/160 (38%)
Query: 293 FVFMALMEYCLVN-IVLGD-----------------------------------SDLPKP 316
FVFMAL+EY LVN I G S L
Sbjct: 315 FVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKMRLDVNKMDPHENILLSTLEIK 374
Query: 317 PEPAKQDKIFELAAKENARLL----------TGQPMIPPNHQQAQRNLAQ---RARTRA- 362
E A + + L + L G P +R++AQ R R RA
Sbjct: 375 NEMATSEAVMGLGDPRSTMLAYDASSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRAS 434
Query: 363 -----------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
+N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 435 QLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 474
>gi|348575237|ref|XP_003473396.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Cavia porcellus]
Length = 512
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 445 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 504
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 505 VYWLYYVN 512
>gi|4503865|ref|NP_000804.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 2 precursor
[Homo sapiens]
gi|114603232|ref|XP_001143967.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pan troglodytes]
gi|114603234|ref|XP_001144033.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Pan troglodytes]
gi|297676569|ref|XP_002816203.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Pongo abelii]
gi|297676571|ref|XP_002816204.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pongo abelii]
gi|332238931|ref|XP_003268656.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Nomascus leucogenys]
gi|332238935|ref|XP_003268658.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Nomascus leucogenys]
gi|332238937|ref|XP_003268659.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Nomascus leucogenys]
gi|390459183|ref|XP_002744173.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
4 [Callithrix jacchus]
gi|395817132|ref|XP_003782029.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Otolemur garnettii]
gi|397473112|ref|XP_003808064.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Pan paniscus]
gi|397473116|ref|XP_003808066.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
3 [Pan paniscus]
gi|403287100|ref|XP_003934795.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Saimiri boliviensis boliviensis]
gi|403287102|ref|XP_003934796.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Saimiri boliviensis boliviensis]
gi|426350875|ref|XP_004042989.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Gorilla gorilla gorilla]
gi|426350877|ref|XP_004042990.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Gorilla gorilla gorilla]
gi|455946|gb|AAB29370.1| gamma-aminobutyric acid A receptor beta 2 subunit [Homo sapiens]
gi|957261|gb|AAB33983.1| GABAA receptor beta 2 subunit [Homo sapiens]
gi|71043419|gb|AAH99705.1| GABRB2 protein [Homo sapiens]
gi|71043452|gb|AAH99719.1| GABRB2 protein [Homo sapiens]
gi|85662636|gb|AAI05640.1| GABRB2 protein [Homo sapiens]
gi|119581947|gb|EAW61543.1| gamma-aminobutyric acid (GABA) A receptor, beta 2, isoform CRA_a
[Homo sapiens]
gi|158260653|dbj|BAF82504.1| unnamed protein product [Homo sapiens]
gi|168277470|dbj|BAG10713.1| gamma-aminobutyric-acid receptor subunit beta-2 precursor
[synthetic construct]
gi|262527823|gb|ACY69097.1| gamma-aminobutyric acid A receptor beta 2 isoform 1 [Macaca
mulatta]
gi|380811400|gb|AFE77575.1| gamma-aminobutyric acid receptor subunit beta-2 isoform 2 [Macaca
mulatta]
Length = 474
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 56/160 (35%), Gaps = 62/160 (38%)
Query: 293 FVFMALMEYCLVN-IVLGD-----------------------------------SDLPKP 316
FVFMAL+EY LVN I G S L
Sbjct: 315 FVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKMRLDVNKMDPHENILLSTLEIK 374
Query: 317 PEPAKQDKIFELAAKENARLL----------TGQPMIPPNHQQAQRNLAQ---RARTRA- 362
E A + + L + L G P +R++AQ R R RA
Sbjct: 375 NEMATSEAVMGLGDPRSTMLAYDASSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRAS 434
Query: 363 -----------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
+N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 435 QLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 474
>gi|431918110|gb|ELK17338.1| Gamma-aminobutyric acid receptor subunit beta-2 [Pteropus alecto]
Length = 474
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 56/160 (35%), Gaps = 62/160 (38%)
Query: 293 FVFMALMEYCLVN-IVLGD-----------------------------------SDLPKP 316
FVFMAL+EY LVN I G S L
Sbjct: 315 FVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANSEKMRLDVNKMDPHENILLSTLEIK 374
Query: 317 PEPAKQDKIFELAAKENARLL----------TGQPMIPPNHQQAQRNLAQ---RARTRA- 362
E A + + L + L G P +R++AQ R R RA
Sbjct: 375 NEMATSEAVMGLGDPRSTMLAYDASNIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRAS 434
Query: 363 -----------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
+N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 435 QLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 474
>gi|158260483|dbj|BAF82419.1| unnamed protein product [Homo sapiens]
Length = 474
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 56/160 (35%), Gaps = 62/160 (38%)
Query: 293 FVFMALMEYCLVN-IVLGD-----------------------------------SDLPKP 316
FVFMAL+EY LVN I G S L
Sbjct: 315 FVFMALLEYALVNYIFFGRGPLRQKKAAEKAASANNEKMRLDVNKMDPHENILLSTLEIK 374
Query: 317 PEPAKQDKIFELAAKENARLL----------TGQPMIPPNHQQAQRNLAQ---RARTRA- 362
E A + + L + L G P +R++AQ R R RA
Sbjct: 375 NEMATSEAVMGLGDPRSTMLAYDASSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRAS 434
Query: 363 -----------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
+N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 435 QLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 474
>gi|73953537|ref|XP_867070.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Canis lupus familiaris]
Length = 474
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 56/160 (35%), Gaps = 62/160 (38%)
Query: 293 FVFMALMEYCLVN-IVLGD-----------------------------------SDLPKP 316
FVFMAL+EY LVN I G S L
Sbjct: 315 FVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKMRLDVNKMDPHENILLSTLEIK 374
Query: 317 PEPAKQDKIFELAAKENARLL----------TGQPMIPPNHQQAQRNLAQ---RARTRA- 362
E A + + L + L G P +R++AQ R R RA
Sbjct: 375 NEMATSEAVMGLGDPRSTMLAYDATSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRAS 434
Query: 363 -----------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
+N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 435 QLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 474
>gi|296485094|tpg|DAA27209.1| TPA: gamma-aminobutyric acid (GABA) A receptor, beta 2 isoform 1
[Bos taurus]
Length = 519
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 160 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSI 219
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 220 VDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 279
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 280 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 321
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 193 EGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVD 249
G P V ++ + +D + E +M Y ++F Q W+D RL +P N+T + R+ +
Sbjct: 63 SGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVAD-- 120
Query: 250 WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 121 ---QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 165
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 452 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 511
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 512 VYWLYYVN 519
>gi|292495011|sp|P63137.2|GBRB2_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
gi|262527825|gb|ACY69098.1| gamma-aminobutyric acid A receptor beta 2 long isoform [Mus
musculus]
Length = 512
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 445 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 504
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 505 VYWLYYVN 512
>gi|301753441|ref|XP_002912562.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Ailuropoda melanoleuca]
gi|281345130|gb|EFB20714.1| hypothetical protein PANDA_000325 [Ailuropoda melanoleuca]
Length = 512
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 445 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 504
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 505 VYWLYYVN 512
>gi|146286184|sp|P0C2W5.1|GBRB2_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-2;
AltName: Full=GABA(A) receptor subunit beta-2; Flags:
Precursor
Length = 472
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 151 RITTTTACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 209
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 210 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 269
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 270 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 312
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 43 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 102
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++
Sbjct: 103 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 151
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFAE 390
IDR+SR+FFPV+F+ N YW+ +
Sbjct: 447 IDRWSRIFFPVVFSFFNIVYWLYYVN 472
>gi|348575235|ref|XP_003473395.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Cavia porcellus]
Length = 474
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 407 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 466
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 467 VYWLYYVN 474
>gi|296485095|tpg|DAA27210.1| TPA: gamma-aminobutyric acid (GABA) A receptor, beta 2 isoform 2
[Bos taurus]
Length = 481
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 160 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSI 219
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 220 VDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 279
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 280 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 321
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 193 EGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVD 249
G P V ++ + +D + E +M Y ++F Q W+D RL +P N+T + R+ +
Sbjct: 63 SGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVAD-- 120
Query: 250 WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+W PD++F N K +T+ N + L+ D T+LY ++
Sbjct: 121 ---QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 160
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 56/160 (35%), Gaps = 62/160 (38%)
Query: 293 FVFMALMEYCLVN-IVLGD-----------------------------------SDLPKP 316
FVFMAL+EY LVN I G S L
Sbjct: 322 FVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKMRLDVNKMDPHENILLSTLEIK 381
Query: 317 PEPAKQDKIFELAAKENARLL----------TGQPMIPPNHQQAQRNLAQ---RARTRA- 362
E A + + L + L G P +R++AQ R R RA
Sbjct: 382 NEMATSEAVMGLGDPRSTMLAYDASSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRAS 441
Query: 363 -----------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
+N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 442 QLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 481
>gi|291387761|ref|XP_002710400.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, beta 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 476
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 409 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 468
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 469 VYWLYYVN 476
>gi|291387759|ref|XP_002710399.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, beta 2-like
isoform 1 [Oryctolagus cuniculus]
Length = 512
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 445 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 504
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 505 VYWLYYVN 512
>gi|149726130|ref|XP_001503453.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Equus caballus]
Length = 474
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 56/160 (35%), Gaps = 62/160 (38%)
Query: 293 FVFMALMEYCLVN-IVLGD-----------------------------------SDLPKP 316
FVFMAL+EY LVN I G S L
Sbjct: 315 FVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKMRLDVNKMDPHENILLSTLEIK 374
Query: 317 PEPAKQDKIFELAAKENARLL----------TGQPMIPPNHQQAQRNLAQ---RARTRA- 362
E A + + L + L G P +R++AQ R R RA
Sbjct: 375 NEMATSEAVMGLGDPRSTMLAYDASSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRAS 434
Query: 363 -----------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
+N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 435 QLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 474
>gi|115532183|ref|NP_001024473.2| Protein GGR-2, isoform b [Caenorhabditis elegans]
gi|351049759|emb|CCD63813.1| Protein GGR-2, isoform b [Caenorhabditis elegans]
Length = 513
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 104/159 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+++ + C +N +P D+Q C L++ S ++TT+ L+ +W + P+ + I + + +V
Sbjct: 149 RISMVVVCTLNLEKWPLDSQRCHLRILSYAYTTEQLVIKWKEDEPITRNPNIAMSDMHIV 208
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
C YSTG ++C+ F +KR + +++ +Y+PT LIV++SW SFW+ EA PA
Sbjct: 209 DLYPGLCDGNYSTGTWSCVTAEFFVKREITHHVMQSYVPTTLIVVISWFSFWLDVEAVPA 268
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+L +T+LLTLSTQ ++ +LP VSY+KA+D +M AC
Sbjct: 269 RVSLAITTLLTLSTQANAARMALPEVSYMKAIDVWMGAC 307
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 7/136 (5%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQP--TIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKD 230
+++L ++YD PP + + T+V + + G+ S +M + D++F Q W+D
Sbjct: 30 LDNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGMSSFRTQTMDFQLDVYFQQFWRD 89
Query: 231 HRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYM 290
RL N T + + L MW+PD +F NA+ F +T PN VW+ D +ILY
Sbjct: 90 PRL--AHNETRRVLVKDKAVLHKMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYD 147
Query: 291 VKFVFMALMEYCLVNI 306
+ ++++ C +N+
Sbjct: 148 TR---ISMVVVCTLNL 160
>gi|260822687|ref|XP_002606733.1| hypothetical protein BRAFLDRAFT_82373 [Branchiostoma floridae]
gi|229292077|gb|EEN62743.1| hypothetical protein BRAFLDRAFT_82373 [Branchiostoma floridae]
Length = 466
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T L+C M+ YP D Q C+L++ES +T +DLIF W + + +KI+L Q L
Sbjct: 160 RITSVLACKMDLRKYPLDEQTCTLELESYGYTKEDLIFTWKNGNKSIHNLDKIDLSQFSL 219
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ T VY TG + L + F L R + ++L TY+P+ L+VI SWVSFWI EA P
Sbjct: 220 GDHNTMTAESVYETGTYPRLVLSFKLHRNVFFFLLQTYVPSILLVISSWVSFWINHEAVP 279
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T ++ASLP +SY+KAVD ++ C V
Sbjct: 280 ARVALGITTVLTMTTFITSARASLPRISYIKAVDVYLVMCFV 321
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPENMT 240
YD+ P + ++ +TV +DS+ E + Y I Q WKD RL + +++
Sbjct: 54 YDRNFRPNFGKEALVINMSMTVASIDSVSEVDLDYTITILLRQFWKDQRLAYRGMNRSLS 113
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+ RL+E +W PD+F N+K +T+ N + L+ D ++Y ++
Sbjct: 114 LDGRLVEA-----LWVPDTFLLNSKEAFLHRVTVDNRLIRLFPDGELIYGMR 160
>gi|443685844|gb|ELT89317.1| hypothetical protein CAPTEDRAFT_178435 [Capitella teleta]
Length = 357
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 102/163 (62%), Gaps = 2/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
RL++ L+C M YP D Q C ++ S +TTDD++ W + P+ ++ +I LP+ L
Sbjct: 69 RLSVTLACDMQLEKYPMDNQTCKIEFGSYGYTTDDIVLVWKALDDPVEINPEISLPEFVL 128
Query: 65 VKNKTADCSQVYST-GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ C+ Y+T G+F CL LKRRL +Y+ Y+P+ LIV++SWVSFWI +A
Sbjct: 129 MAVHPVTCATNYATTGSFPCLRTFIHLKRRLKFYILQIYLPSLLIVLLSWVSFWIDLDAV 188
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR +LG+ ++LT++TQ A LP VS+ KA+D +M+ C V
Sbjct: 189 PARTSLGILTILTITTQSAGINIGLPAVSFTKAIDVWMATCLV 231
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 222 IFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHY 278
+F QTW D RLR ++T Y + +W PD F +N K+ F +T+PN
Sbjct: 1 MFLRQTWIDERLRYSGFNRSITLNY-----NQFSRLWSPDLFIRNLKSGQFHDITVPNRL 55
Query: 279 VWLYKDKTILY 289
+ L D T+LY
Sbjct: 56 IRLSPDGTVLY 66
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 42/131 (32%)
Query: 293 FVFMALMEYCLVNIV----------------------LGDSDL---------PKPPEPAK 321
FVF+A +EY +VN++ G +++ P E AK
Sbjct: 232 FVFVAFLEYSVVNVLSRKHKKEKKNEEKFKRMTAQLATGIANIGGRRSKMLRAGPDEEAK 291
Query: 322 QDKIFELAAKENARLLTGQPMIPP---NHQQAQRNLAQRAR-TRAINIDRFSRVFFPVLF 377
+ +I R+ GQ + P Q + ++ RA+ +A+ +D SRV FPVLF
Sbjct: 292 EAQI-------RHRMKNGQTPLDPETRRQQSMEGSIWSRAQHNQALMVDVISRVIFPVLF 344
Query: 378 AILNCTYWIMF 388
I YW ++
Sbjct: 345 TIFQAIYWPLY 355
>gi|440913394|gb|ELR62847.1| Gamma-aminobutyric acid receptor subunit beta-2 [Bos grunniens
mutus]
Length = 484
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 417 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 476
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 477 VYWLYYVN 484
>gi|262527819|gb|ACY69095.1| gamma-aminobutyric acid A receptor beta 2 isoform 3 [Homo sapiens]
Length = 313
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 90 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 148
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 149 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 208
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 209 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 251
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 202 HVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPD 258
++ + +D + E +M Y ++F Q W+D RL +P N+T + R+ + +W PD
Sbjct: 2 NIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVAD-----QLWVPD 56
Query: 259 SFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 57 TYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 95
>gi|307200307|gb|EFN80572.1| Gamma-aminobutyric acid receptor subunit beta-like [Harpegnathos
saltator]
Length = 460
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W E P+ + ELP
Sbjct: 120 ITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMYWK-ETPVRGVKDAELP 178
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 179 QFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 238
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 239 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 284
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G P +V +T+ D+I E +M Y ++ Q WKD RL E
Sbjct: 19 YDIRLRPNFGGDPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFSHE--GEV 76
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L D+ + +W PD+FF N K +T N V L D +I Y ++F
Sbjct: 77 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSITYGMRF 126
>gi|395505010|ref|XP_003756839.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Sarcophilus harrisii]
Length = 474
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 153
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 56/160 (35%), Gaps = 62/160 (38%)
Query: 293 FVFMALMEYCLVN-IVLGD-----------------------------------SDLPKP 316
FVFMAL+EY LVN I G S L
Sbjct: 315 FVFMALLEYALVNYIFFGRGPQRQKKAAEKAANANNEKLRMDVNKMDPHENILLSTLEIK 374
Query: 317 PEPAKQDKIFELAAKENARLL----------TGQPMIPPNHQQAQRNLAQ---RARTRA- 362
E A + + L + L G P +R++AQ R R RA
Sbjct: 375 NEMATSEAVMGLGDPRSTMLAYDASSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRAS 434
Query: 363 -----------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
+N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 435 QLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 474
>gi|118097255|ref|XP_001232378.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
1 [Gallus gallus]
gi|542693|pir||JH0829 gamma-aminobutyric acid A receptor beta 2S chain precursor -
chicken
Length = 474
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 56/160 (35%), Gaps = 62/160 (38%)
Query: 293 FVFMALMEYCLVN-IVLGD-----------------------------------SDLPKP 316
FVFMAL+EY LVN I G S L
Sbjct: 315 FVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKLRMDVNKMDPHENILLSTLEIK 374
Query: 317 PEPAKQDKIFELAAKENARLL----------TGQPMIPPNHQQAQRNLAQ---RARTRA- 362
E A + + L + L G P +R++AQ R R RA
Sbjct: 375 NEMAASEAVMGLGDPRSTMLAYDTSSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRAS 434
Query: 363 -----------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
+N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 435 QLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 474
>gi|326928398|ref|XP_003210367.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Meleagris gallopavo]
Length = 474
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 56/160 (35%), Gaps = 62/160 (38%)
Query: 293 FVFMALMEYCLVN-IVLGD-----------------------------------SDLPKP 316
FVFMAL+EY LVN I G S L
Sbjct: 315 FVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKLRMDVNKMDPHENILLSTLEIK 374
Query: 317 PEPAKQDKIFELAAKENARLL----------TGQPMIPPNHQQAQRNLAQ---RARTRA- 362
E A + + L + L G P +R++AQ R R RA
Sbjct: 375 NEMAASEAVMGLGDPRSTMLAYDTSSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRAS 434
Query: 363 -----------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
+N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 435 QLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 474
>gi|363738921|ref|XP_003642096.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 [Gallus
gallus]
Length = 473
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 152 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQFSI 211
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 VDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 271
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 313
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 44 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 103
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 104 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 157
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 56/160 (35%), Gaps = 62/160 (38%)
Query: 293 FVFMALMEYCLVN-IVLGD-----------------------------------SDLPKP 316
FVFMAL+EY LVN I G S L
Sbjct: 314 FVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKLRMDVNKMDPHENILLSTLEIK 373
Query: 317 PEPAKQDKIFELAAKENARLL----------TGQPMIPPNHQQAQRNLAQ---RARTRA- 362
E A + + L + L G P +R++AQ R R RA
Sbjct: 374 NEMAASEAVMGLGDPRSTMLAYDTSSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRAS 433
Query: 363 -----------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
+N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 434 QLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 473
>gi|301753443|ref|XP_002912563.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 476
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 409 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 468
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 469 VYWLYYVN 476
>gi|133778333|gb|AAI15079.1| Gabrb2 protein [Danio rerio]
Length = 519
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + ++ E+IELPQ +
Sbjct: 152 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGVERIELPQFSI 211
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG++ L + F LKR +GY++ TY+P+ I I+SWVSFWI +A+
Sbjct: 212 VDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSIPITILSWVSFWINYDASA 271
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 313
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 44 KGYDIRLRPDFGGAPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLN 103
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 104 LTLDNRVAD-----QLWVPDTYFLNDKRSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 157
>gi|38491407|gb|AAR21858.1| GABA-beta subunit [Cooperia oncophora]
Length = 543
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 106/161 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT LSC+MN +P D+Q C++++ES +TT +++ W+ + E +++PQ +
Sbjct: 180 RLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMLWNRPKAVHGVEDVDVPQFTIT 239
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+T D +TG++ L ++F L+R +GY++F TY+P LIV++SWVSFWI EA A
Sbjct: 240 GYQTEDRVVSTATGSYQRLSLVFQLQRSVGYFIFQTYLPCVLIVMLSWVSFWINHEATSA 299
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV LG+T++LT++T + SLP +SY+K++D ++ C V
Sbjct: 300 RVALGITTVLTMTTISTGVRQSLPRISYVKSIDVYLVMCFV 340
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 4/140 (2%)
Query: 154 LKAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDE 213
L+ A + + S+ S D+L + YD P G ++ + + DSI E
Sbjct: 46 LRNSTASQNKTSYSNASSLLADLLAD----YDIRLRPGFGGDALLLTMDIIIASFDSISE 101
Query: 214 NSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMT 273
+M Y ++ Q W D RL ++ + L ++ +N+W PD+F N K +T
Sbjct: 102 VNMDYTITMYLHQYWTDERLSWGGSVPIDEMTLSGEFSQNIWVPDTFLANDKHSFLHEVT 161
Query: 274 IPNHYVWLYKDKTILYMVKF 293
N + + D I Y ++
Sbjct: 162 ERNKMLRISVDGKIAYGMRL 181
>gi|269914161|ref|NP_001161734.1| gamma-aminobutyric acid receptor subunit beta-2 precursor
[Ornithorhynchus anatinus]
Length = 512
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 445 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 504
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 505 VYWLYYVN 512
>gi|301753445|ref|XP_002912564.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 3 [Ailuropoda melanoleuca]
Length = 474
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 56/160 (35%), Gaps = 62/160 (38%)
Query: 293 FVFMALMEYCLVN-IVLGD-----------------------------------SDLPKP 316
FVFMAL+EY LVN I G S L
Sbjct: 315 FVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKMRLDVNKMDPHENILLSTLEIK 374
Query: 317 PEPAKQDKIFELAAKENARLL----------TGQPMIPPNHQQAQRNLAQ---RARTRA- 362
E A + + L + L G P +R++AQ R R RA
Sbjct: 375 NEMATSEAVMGLGDPRSTMLAYDATSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRAS 434
Query: 363 -----------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
+N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 435 QLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 474
>gi|345798002|ref|XP_848482.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3 [Canis
lupus familiaris]
Length = 630
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 311 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 370
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 371 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 430
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 431 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 472
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPENMTSEYRLLEVDW 250
G P V ++ + +D + E +M Y ++F Q W+D RL +P N+T + R+ +
Sbjct: 215 GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVAD--- 271
Query: 251 LKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 272 --QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 316
>gi|332026036|gb|EGI66187.1| Gamma-aminobutyric acid receptor subunit beta-like protein
[Acromyrmex echinatior]
Length = 460
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W E P+ ++ ELP
Sbjct: 120 ITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVLMYWK-ETPVHGVKEAELP 178
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 179 QFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINY 238
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 239 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 284
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G P V +T+ D+I E +M Y ++ Q WKD RL E
Sbjct: 19 YDIRLRPNFGGDPLRVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFSHE--GEI 76
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L D+ + +W PD+FF N K +T N V L D +I Y ++F
Sbjct: 77 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSITYGMRF 126
>gi|262527817|gb|ACY69094.1| gamma-aminobutyric acid A receptor beta 2 isoform 4 [Homo sapiens]
Length = 372
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
>gi|118097253|ref|XP_414492.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Gallus gallus]
gi|224068159|ref|XP_002193169.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2 isoform
2 [Taeniopygia guttata]
Length = 491
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 424 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 483
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 484 VYWLYYVN 491
>gi|326928400|ref|XP_003210368.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Meleagris gallopavo]
Length = 491
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 424 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 483
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 484 VYWLYYVN 491
>gi|326919230|ref|XP_003205885.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Meleagris gallopavo]
Length = 473
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 101/161 (62%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + IELPQ ++
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGESAVTGVSNIELPQFSII 213
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+ A
Sbjct: 214 DYKMVSKRVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAA 273
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 RVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 314
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 216 MTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTM 272
+ Y ++F Q+W+D RL +P N+T + R+ + +W PD++F+N K +
Sbjct: 80 LDYTLTMYFQQSWRDKRLSYSGIPLNLTLDNRVAD-----QLWVPDTYFQNDKKSFVHGV 134
Query: 273 TIPNHYVWLYKDKTILYMVKFVFMA 297
T+ N + L+ D T+LY ++ A
Sbjct: 135 TVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|260831642|ref|XP_002610767.1| hypothetical protein BRAFLDRAFT_91559 [Branchiostoma floridae]
gi|229296136|gb|EEN66777.1| hypothetical protein BRAFLDRAFT_91559 [Branchiostoma floridae]
Length = 428
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 113/212 (53%), Gaps = 53/212 (25%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-------DPEMPLAVDEKIE 58
RLTL L+C M +P D Q C +++ES TTDD+ QW + + P+ + + +E
Sbjct: 166 RLTLTLACPMKLQRFPMDQQVCPMKLESYGMTTDDMRLQWNYLKKNGEEQNPVQIADDLE 225
Query: 59 LPQLQLVKNK--------------TADCSQV----------------------------- 75
LPQ ++V + T D V
Sbjct: 226 LPQFRIVSIRYTQYTMDYSTDGMTTDDVRLVWKETDTPVAIADDLVLPQFAITSIVTTQM 285
Query: 76 ---YSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVT 132
YSTG+++ + F L+R++GYY+ TY+PT LIVI+SWVSFWI EAAPARV LG+T
Sbjct: 286 IMEYSTGSYSRMRAEFTLERQMGYYMIQTYVPTILIVILSWVSFWINIEAAPARVALGIT 345
Query: 133 SLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
++LT++TQ + S + P VSY+KA+D +M+ C
Sbjct: 346 TVLTMTTQSSGSSGAKPKVSYVKAIDIWMAVC 377
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P +G V + V DSI E +M Y +IF QTW D RL EN Y
Sbjct: 55 YDKRIRPDFKGPSVNVSCDIYVNSFDSISETTMDYRLNIFLRQTWTDRRLAFEENEEMGY 114
Query: 244 R---LLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVF 295
L+ LK +W PD+FF N K F +T N + + ILY ++
Sbjct: 115 SDSLSLDPSLLKKIWVPDTFFTNEKGANFHYVTTENKLLRVNSKGEILYSIRLTL 169
>gi|260822689|ref|XP_002606734.1| hypothetical protein BRAFLDRAFT_226027 [Branchiostoma floridae]
gi|229292078|gb|EEN62744.1| hypothetical protein BRAFLDRAFT_226027 [Branchiostoma floridae]
Length = 439
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T K +C M+ YP D Q C LQ ES +TT+D+ F+W D + E+IEL Q +
Sbjct: 113 RITAKAACPMDLRKYPLDVQTCPLQFESYGYTTEDIRFKWKDGNESIHGLERIELAQFWV 172
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+++ +D Q Y TG + L + F L R + Y++ TY+P L+V++SWVSFWI EA P
Sbjct: 173 GEHEVSDEVQKYETGEYPRLTIRFKLYRNIMYFILQTYLPATLLVVLSWVSFWINHEAVP 232
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++T ++ SLP +SY+KA+D + C
Sbjct: 233 ARVALGITTVLTMTTFITSARDSLPKISYIKAIDVYCVMC 272
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---NMT 240
YD+ P G P +V ++V +D + E M Y IF + W+D RL E +++
Sbjct: 7 YDRNFRPGFGGPPLLVDMSLSVASIDRVSEVDMDYTLTIFLREYWRDERLHFSETNRSLS 66
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ RL+E +W PD+F NAK+ +T+ N + L+ D +LY ++ A
Sbjct: 67 LDGRLVE-----RLWVPDTFLVNAKSSFLHKVTVDNRLLRLFPDGRLLYGLRITAKA 118
>gi|550337|emb|CAA51326.1| GABA-A receptor beta 2 subunit [Gallus gallus]
Length = 430
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
>gi|432856050|ref|XP_004068345.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-3-like
[Oryzias latipes]
Length = 496
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + +IELPQ +
Sbjct: 175 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDTAVTGVTRIELPQFSI 234
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F L+R +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 235 VDYKLVSRNVVFSTGAYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWINYDASA 294
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 295 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 336
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR---LRLPEN 238
K YD P G P V + V +D + E +M Y ++F Q W+D R L +P N
Sbjct: 67 KGYDIRLRPDFGGPPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYLGIPLN 126
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 127 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 180
>gi|432118042|gb|ELK37979.1| Gamma-aminobutyric acid receptor subunit beta-3, partial [Myotis
davidii]
Length = 383
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 75 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSI 134
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 135 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 194
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 195 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 236
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 218 YAADIFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y ++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+
Sbjct: 3 YTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTV 57
Query: 275 PNHYVWLYKDKTILYMVKFVFMA 297
N + L+ D T+LY ++ A
Sbjct: 58 KNRMIRLHPDGTVLYGLRITTTA 80
>gi|14714965|gb|AAH10641.1| Gamma-aminobutyric acid (GABA) A receptor, beta 3 [Homo sapiens]
gi|157928120|gb|ABW03356.1| gamma-aminobutyric acid (GABA) A receptor, beta 3 [synthetic
construct]
Length = 473
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDELNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|348571661|ref|XP_003471614.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Cavia porcellus]
Length = 416
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 96 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEKAVTGVNKIELPQFSI 155
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 156 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 215
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 216 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 257
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 205 VMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFF 261
+ D++ E ++ Y ++F Q+WKD RL +P N+T + R+ + +W PD++F
Sbjct: 11 ITATDNLSELNIDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVAD-----QLWVPDTYF 65
Query: 262 KNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
N K +T+ N + L+ D T+LY ++ A
Sbjct: 66 LNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 101
>gi|2736068|gb|AAB94045.1| gamma-aminobutyric acid receptor beta subunit [Takifugu rubripes]
Length = 453
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD++F W + + +K+ELPQ +
Sbjct: 96 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDTAVTGVDKLELPQFSI 155
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V + ++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 156 VGIRLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASA 215
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 216 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 257
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 196 PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---NMTSEYRLLEVDWLK 252
P IV + + +DSI E +M Y ++F Q+W+D RL E N+T + R+ +
Sbjct: 2 PVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYGELKLNLTLDNRVAD----- 56
Query: 253 NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 57 QLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 101
>gi|3980057|emb|CAA39970.1| GABA-A receptor beta-4 subunit [Gallus gallus]
Length = 374
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +T DD++F W + + E +ELPQ +
Sbjct: 126 RITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGMEVLELPQFTI 185
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++ + V++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 186 IEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASA 245
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 246 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 287
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + + +D I E +M Y ++F Q+W+D RL LP N
Sbjct: 18 KGYDVRLRPDFGGNPVTVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLAYNDLPLN 77
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 78 LTLDNRVAD-----QLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 131
>gi|440908382|gb|ELR58403.1| Gamma-aminobutyric acid receptor subunit beta-1, partial [Bos
grunniens mutus]
Length = 321
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 1 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 60
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 61 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 120
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 121 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 162
>gi|426344254|ref|XP_004038689.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Gorilla
gorilla gorilla]
Length = 404
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 84 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 143
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 144 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 203
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 204 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 245
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 218 YAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y ++F Q+WKD RL +P N+T + R+ + +W PD++F N K +T+
Sbjct: 12 YTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTV 66
Query: 275 PNHYVWLYKDKTILYMVKFVFMA 297
N + L+ D T+LY ++ A
Sbjct: 67 KNRMIRLHPDGTVLYGLRITTTA 89
>gi|281338652|gb|EFB14236.1| hypothetical protein PANDA_005229 [Ailuropoda melanoleuca]
Length = 322
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 1 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 60
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 61 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 120
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 121 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 162
>gi|350536015|ref|NP_001234895.1| ligand-gated chloride channel homolog 3 precursor [Nasonia
vitripennis]
gi|269856291|gb|ACZ51428.1| GABA-gated ion channel [Nasonia vitripennis]
Length = 512
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W E P+ ++ +LP
Sbjct: 163 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVLDVVMSWK-ETPVRGVDEAKLP 221
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 222 QFTIIGYETNDRKEKLATGIYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 281
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 282 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 327
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 162 SACTVSSTSLTFNDILPEDPKL-------YDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
+AC + S S +D L + YD P G P V +T+ D+I E
Sbjct: 33 AACFLQSGSTELSDRLANVTQTISRILDGYDIRLRPNFGGDPLFVEMDLTIASFDAISEV 92
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y ++ Q WKD RL E L D+ + +W PD+FF N K +T
Sbjct: 93 NMDYTITMYLNQYWKDERLAFSHE--KEILTLSGDFAEKIWVPDTFFANDKHSFLHDVTE 150
Query: 275 PNHYVWLYKDKTILYMVKF 293
N V L D ++ Y ++F
Sbjct: 151 RNKLVRLAGDGSVTYGMRF 169
>gi|221040640|dbj|BAH11997.1| unnamed protein product [Homo sapiens]
Length = 402
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIF-QWDPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F + + + E+IELPQ +
Sbjct: 83 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYRRGGDKAVTGVERIELPQFSI 142
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 143 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 202
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 203 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 244
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 218 YAADIFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y ++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+
Sbjct: 11 YTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTV 65
Query: 275 PNHYVWLYKDKTILYMVKFVFMA 297
N + L+ D T+LY ++ A
Sbjct: 66 KNRMIRLHPDGTVLYGLRITTTA 88
>gi|344265224|ref|XP_003404685.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 2 [Loxodonta africana]
Length = 516
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F L+R +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWISYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 9/59 (15%)
Query: 339 GQPMIPPNHQQAQRNLAQRARTRAINI---------DRFSRVFFPVLFAILNCTYWIMF 388
G+ + + Q + +L +RA I I DR+SR+FFPV+F+ N YW+ +
Sbjct: 456 GRNALERHVAQKKSHLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYY 514
>gi|432899761|ref|XP_004076626.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Oryzias latipes]
Length = 478
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD-EKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD++F W +K+ELPQ +
Sbjct: 121 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGNSAVTGVDKLELPQFSI 180
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+ + ++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 181 VELRLVSREVRFATGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASA 240
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 241 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 282
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---N 238
K YD P G P IV + + +DSI E +M Y ++F Q+W D RL E N
Sbjct: 13 KGYDIRLRPDFGGPPVIVGMSINIASIDSISEVNMDYTITMYFQQSWTDKRLAYGELDLN 72
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 73 LTLDNRVAD-----QLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 126
>gi|326677883|ref|XP_694878.5| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4, partial
[Danio rerio]
Length = 455
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD++F W + + +K+ELPQ +
Sbjct: 128 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDNAVTGVDKLELPQFSI 187
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+ + ++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 188 VELRLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASA 247
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 248 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 289
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---N 238
K YD P G P IV + + +DSI E +M Y ++F Q+W+D RL E N
Sbjct: 20 KGYDIRLRPDFGGPPVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYAEMALN 79
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 80 LTLDNRVAD-----QLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 133
>gi|297292527|ref|XP_002804095.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Macaca mulatta]
Length = 422
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 104 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 163
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 164 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 223
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 224 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 265
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 187 MRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEY 243
M P G P V + V +D + E +M Y ++F Q+WKD RL +P N+T +
Sbjct: 1 MWPTSLAGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDN 60
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 61 RVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 109
>gi|402869296|ref|XP_003898699.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Papio
anubis]
Length = 331
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 11 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 70
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 71 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 130
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 131 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 172
>gi|403284708|ref|XP_003933700.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Saimiri boliviensis boliviensis]
Length = 404
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 84 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 143
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 144 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 203
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 204 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 245
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 215 SMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQT 271
S Y ++F Q+WKD RL +P N+T + R+ + +W PD++F N K
Sbjct: 9 SEDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHG 63
Query: 272 MTIPNHYVWLYKDKTILYMVKFVFMA 297
+T+ N + L+ D T+LY ++ A
Sbjct: 64 VTVKNRMIRLHPDGTVLYGLRITTTA 89
>gi|344265222|ref|XP_003404684.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
isoform 1 [Loxodonta africana]
Length = 474
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K V+STG++ L + F L+R +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKLITKKVVFSTGSYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWISYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 9/59 (15%)
Query: 339 GQPMIPPNHQQAQRNLAQRARTRAINI---------DRFSRVFFPVLFAILNCTYWIMF 388
G+ + + Q + +L +RA I I DR+SR+FFPV+F+ N YW+ +
Sbjct: 414 GRNALERHVAQKKSHLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYY 472
>gi|410915504|ref|XP_003971227.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Takifugu rubripes]
Length = 482
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD++F W + + +K+ELPQ +
Sbjct: 155 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDTAVTGVDKLELPQFSI 214
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V + ++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 215 VGIRLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASA 274
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 275 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 316
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---N 238
K YD P G P IV + + +DSI E +M Y ++F Q+W+D RL E N
Sbjct: 47 KGYDIRLRPDFGGPPVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYGELKLN 106
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 107 LTLDNRVAD-----QLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 160
>gi|297292529|ref|XP_001099985.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Macaca mulatta]
Length = 405
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 104 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 163
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 164 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 223
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 224 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 265
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 187 MRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEY 243
M P G P V + V +D + E +M Y ++F Q+WKD RL +P N+T +
Sbjct: 1 MWPTSLAGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDN 60
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 61 RVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 109
>gi|260812521|ref|XP_002600969.1| hypothetical protein BRAFLDRAFT_79167 [Branchiostoma floridae]
gi|229286259|gb|EEN56981.1| hypothetical protein BRAFLDRAFT_79167 [Branchiostoma floridae]
Length = 380
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD-EKIELPQLQL 64
R+T +C MN YP D Q C+L++ES +TTDDL F W + ++IELPQ +
Sbjct: 143 RITTTAACQMNLRRYPLDEQNCTLEIESYGYTTDDLEFHWKDGKDAVIGWDQIELPQFDI 202
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V +STG + L + F LKR +GY++ TY+P+ LIVI+SWVSFWI PEA
Sbjct: 203 VDYNVEQKVIQFSTGAYPRLSLSFRLKRNIGYFMLQTYMPSVLIVILSWVSFWINPEATA 262
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +ASLP +SY+KA+D ++ C V
Sbjct: 263 ARVALGITTVLTVTTINTSVRASLPKISYVKAIDLYLMGCFV 304
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPENMT 240
YD P G P ++ + + +DSI E +M Y ++F QTW+D RL +P N+T
Sbjct: 37 YDIRLRPDFAGDPLVIGMSIEIASIDSISEVNMDYTMTMYFQQTWRDPRLSYTSVPHNLT 96
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALME 300
+ R+ E ++W PD++F N K +T+ N + L+ D ++LY ++ A
Sbjct: 97 LDGRVAE-----SIWVPDTYFLNDKESYLHGVTVKNRMLRLHHDGSVLYGLRITTTAA-- 149
Query: 301 YCLVNI 306
C +N+
Sbjct: 150 -CQMNL 154
>gi|449266634|gb|EMC77674.1| Gamma-aminobutyric acid receptor subunit beta-4 [Columba livia]
Length = 410
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +T DD++F W + + E +ELPQ +
Sbjct: 79 RITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGMEVLELPQFTI 138
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++ + V++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 139 IEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASA 198
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 199 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 240
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 215 SMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQT 271
S Y ++F Q+W+D RL LP N+T + R+ + +W PD++F N K
Sbjct: 4 SQDYTITMYFQQSWRDKRLAYNDLPLNLTLDNRVAD-----QLWLPDTYFLNDKKSFLHG 58
Query: 272 MTIPNHYVWLYKDKTILYMVKFVFMA 297
+T+ N + L+ D T+LY ++ A
Sbjct: 59 VTVKNRMIRLHPDGTVLYGLRITTTA 84
>gi|410957680|ref|XP_003985453.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Felis catus]
Length = 406
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 84 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 143
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 144 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 203
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 204 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 245
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 218 YAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y ++F Q+WKD RL +P N+T + R+ + +W PD++F N K +T+
Sbjct: 12 YTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTV 66
Query: 275 PNHYVWLYKDKTILYMVKFVFMA 297
N + L+ D T+LY ++ A
Sbjct: 67 KNRMIRLHPDGTVLYGLRITTTA 89
>gi|443703781|gb|ELU01183.1| hypothetical protein CAPTEDRAFT_144043 [Capitella teleta]
Length = 495
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD--EKIELPQLQ 63
R T L+C M+ YP D Q C++++ES + D++ +W AVD K+E+PQ
Sbjct: 159 RFTTTLACMMDLHYYPLDVQNCTVEIESYGYPMQDVVMKWKGGGEDAVDGVAKVEIPQFT 218
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V + + +TG++ L + F ++R +GY++F TY+P+ LIV++SWVSFWI EA
Sbjct: 219 IVDYRCISTVEKLATGSYQRLSLSFKMERNIGYFIFQTYLPSILIVMLSWVSFWINHEAT 278
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 279 SARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 321
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 158 DAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMT 217
D + T+ + S T ++L + YD P+ G+ I+ + + DSI E +M
Sbjct: 30 DEGLDPSTLQNVSRTIANLLEK----YDIRLRPQFGGEALIIEMKLLLASFDSISEVNMD 85
Query: 218 YAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNH 277
Y I+ Q WKD RL +N E L D+ + +W PD+FF N K +T N
Sbjct: 86 YTITIYLNQYWKDERLAFSDNY-DETMTLTGDFAEKIWVPDTFFANDKHSFLHDVTEKNK 144
Query: 278 YVWLYKDKTILYMVKF 293
V L+ D +++Y ++F
Sbjct: 145 MVRLHGDGSLVYGMRF 160
>gi|297673422|ref|XP_002814764.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Pongo abelii]
gi|397490149|ref|XP_003816070.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Pan paniscus]
Length = 404
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 84 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 143
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 144 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 203
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 204 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 245
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 215 SMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQT 271
S Y ++F Q+WKD RL +P N+T + R+ + +W PD++F N K
Sbjct: 9 SEDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHG 63
Query: 272 MTIPNHYVWLYKDKTILYMVKFVFMA 297
+T+ N + L+ D T+LY ++ A
Sbjct: 64 VTVKNRMIRLHPDGTVLYGLRITTTA 89
>gi|313222293|emb|CBY39248.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 92/123 (74%)
Query: 42 IFQWDPEMPLAVDEKIELPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHT 101
+F+W + + + I LPQ +++ +K ADC++ Y++G +TCL FVLKR +GYY+
Sbjct: 30 LFKWSADKSIDMPGGIALPQFKIMGHKLADCTKSYTSGQYTCLRATFVLKREIGYYMIQI 89
Query: 102 YIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
YIP+ LIV++SWVSFWI EA PARV+LG+T++LT+++ +++ +SLP VSY+KA+D ++
Sbjct: 90 YIPSFLIVVLSWVSFWIAVEATPARVSLGITTVLTITSMRSEAGSSLPKVSYVKAIDIWL 149
Query: 162 SAC 164
S C
Sbjct: 150 SLC 152
>gi|27806987|ref|NP_776969.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Bos
taurus]
gi|120766|sp|P08220.1|GBRB1_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|757756|emb|CAA29190.1| GABA beta subunit [Bos taurus]
gi|296486584|tpg|DAA28697.1| TPA: gamma-aminobutyric acid receptor subunit beta-1 precursor [Bos
taurus]
gi|225661|prf||1309301B GABA/benzodiazepine receptor beta
Length = 474
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|6679907|ref|NP_032095.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Mus
musculus]
gi|1730183|sp|P50571.1|GBRB1_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|755155|gb|AAA79973.1| GABA-benzodiazepine receptor beta-1 subunit [Mus musculus]
gi|5804941|emb|CAA38993.1| GABA(A) receptor beta-1 subunit [Mus musculus]
gi|120577721|gb|AAI30259.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Mus
musculus]
gi|148705866|gb|EDL37813.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1, isoform
CRA_b [Mus musculus]
gi|187957278|gb|AAI57921.1| Gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Mus
musculus]
gi|1095218|prf||2108275A GABA-A receptor:SUBUNIT=beta1
Length = 474
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|426231665|ref|XP_004009859.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Ovis
aries]
Length = 474
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|410957678|ref|XP_003985452.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Felis catus]
Length = 476
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|6978867|ref|NP_037088.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Rattus
norvegicus]
gi|120769|sp|P15431.1|GBRB1_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|57794|emb|CAA33493.1| GABA(A) receptor beta-1 preprotein [Rattus sp.]
gi|149035300|gb|EDL90004.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1 [Rattus
norvegicus]
Length = 474
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|432848472|ref|XP_004066362.1| PREDICTED: glycine receptor subunit beta-like [Oryzias latipes]
Length = 498
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 114/162 (70%), Gaps = 5/162 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TT DL+F W + P+ +DE I LPQ +
Sbjct: 174 RLSVTLSCPLDLTLFPMDTQMCKMQLESFGYTTSDLVFMWQSD-PVQMDE-IALPQFDIK 231
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ K +C++ Y TG +TC+EVIF L+R++G+YL Y PT LIV++SW+SFWI P+A
Sbjct: 232 QEDIKYGNCTKYYQGTGYYTCVEVIFTLRRQVGFYLMGVYAPTLLIVVLSWLSFWINPDA 291
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+LS++ + LP VSY+KA+D ++ AC
Sbjct: 292 SAARVPLGILSVLSLSSESMSLASELPKVSYVKAIDIWLIAC 333
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P ++ + SI E +M Y +IF Q W D RL+LP + S+
Sbjct: 66 YDPRIRPNFQGIPVESKVNIFINSFGSIQETTMDYRINIFLRQRWNDPRLQLPADFKSDS 125
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
++ + +W+PD FF N K F +T N ++++++ IL ++
Sbjct: 126 LTIDPKMFQCLWKPDLFFANEKNANFHDVTQDNILLFIFRNGDILISMRL 175
>gi|403284706|ref|XP_003933699.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Saimiri boliviensis boliviensis]
Length = 474
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|449499157|ref|XP_002186823.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Taeniopygia guttata]
Length = 400
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +T DD++F W + + E +ELPQ +
Sbjct: 69 RITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGMEVLELPQFTI 128
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++ + V++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 129 IEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASA 188
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 189 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 230
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 222 IFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHY 278
++F Q+W+D RL LP N+T + R+ + +W PD++F N K +T+ N
Sbjct: 1 MYFQQSWRDKRLAYNDLPLNLTLDNRVAD-----QLWLPDTYFLNDKKSFLHGVTVKNRM 55
Query: 279 VWLYKDKTILYMVKFVFMA 297
+ L+ D T+LY ++ A
Sbjct: 56 IRLHPDGTVLYGLRITTTA 74
>gi|395843747|ref|XP_003794635.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Otolemur garnettii]
Length = 474
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|355687261|gb|EHH25845.1| GABA(A) receptor subunit beta-1 [Macaca mulatta]
gi|355749255|gb|EHH53654.1| GABA(A) receptor subunit beta-1 [Macaca fascicularis]
gi|380784201|gb|AFE63976.1| gamma-aminobutyric acid receptor subunit beta-1 precursor [Macaca
mulatta]
Length = 474
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|344288345|ref|XP_003415911.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Loxodonta africana]
Length = 474
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|194097327|ref|NP_000803.2| gamma-aminobutyric acid receptor subunit beta-1 precursor [Homo
sapiens]
gi|114594931|ref|XP_001154620.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
2 [Pan troglodytes]
gi|395734909|ref|XP_002814763.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Pongo abelii]
gi|397490147|ref|XP_003816069.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Pan paniscus]
gi|23831128|sp|P18505.2|GBRB1_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit beta-1;
AltName: Full=GABA(A) receptor subunit beta-1; Flags:
Precursor
gi|182923|gb|AAA35862.1| gamma-aminobutyric acid receptor beta-1 subunit, partial [Homo
sapiens]
gi|119613437|gb|EAW93031.1| gamma-aminobutyric acid (GABA) A receptor, beta 1, isoform CRA_b
[Homo sapiens]
gi|168277852|dbj|BAG10904.1| gamma-aminobutyric-acid receptor subunit beta-1 precursor
[synthetic construct]
gi|189053428|dbj|BAG35594.1| unnamed protein product [Homo sapiens]
Length = 474
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|390460895|ref|XP_002745915.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Callithrix jacchus]
Length = 474
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|350587479|ref|XP_003356958.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like,
partial [Sus scrofa]
Length = 347
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 27 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 86
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 87 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 146
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 147 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 188
>gi|301763282|ref|XP_002917058.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Ailuropoda melanoleuca]
Length = 475
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|18490267|gb|AAH22449.1| Gamma-aminobutyric acid (GABA) A receptor, beta 1 [Homo sapiens]
gi|123983084|gb|ABM83283.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
gi|123993389|gb|ABM84296.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
gi|123997777|gb|ABM86490.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
gi|124000361|gb|ABM87689.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
gi|124000363|gb|ABM87690.1| gamma-aminobutyric acid (GABA) A receptor, beta 1 [synthetic
construct]
Length = 474
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + + PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLCVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|402873298|ref|XP_003900516.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like,
partial [Papio anubis]
Length = 359
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 103/161 (63%), Gaps = 1/161 (0%)
Query: 7 LTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQLV 65
+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +V
Sbjct: 1 ITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSIV 60
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+ A
Sbjct: 61 DYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAA 120
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 121 RVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 161
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 292 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 351
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 352 VYWLYYVN 359
>gi|354491372|ref|XP_003507829.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Cricetulus griseus]
Length = 472
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|31635|emb|CAA32875.1| GABA-A receptor beta 1 subunit [Homo sapiens]
Length = 474
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|327283472|ref|XP_003226465.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Anolis carolinensis]
Length = 504
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEK-IELPQLQL 64
R+T +C M+ YP D Q C+L++ES +T DD++F W K +ELPQ +
Sbjct: 168 RITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNNSAVTGMKDLELPQFTI 227
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++ + V++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 228 IEQRLVTREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSVLITILSWVSFWINYDASA 287
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 288 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 329
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + + +D I E +M Y ++F Q+W+D RL LP N
Sbjct: 60 KGYDVRLRPDFGGNPVTVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLAYSDLPLN 119
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 120 LTLDNRVAD-----QLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 173
>gi|332218624|ref|XP_003258454.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 isoform
1 [Nomascus leucogenys]
Length = 474
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQPWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|326924418|ref|XP_003208424.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Meleagris gallopavo]
Length = 498
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +T DD++F W + + E +ELPQ +
Sbjct: 167 RITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGMEVLELPQFTI 226
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++ + V++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 227 IEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASA 286
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 287 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 328
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + + +D I E +M Y ++F Q+W+D RL LP N
Sbjct: 59 KGYDVRLRPDFGGNPVTVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLAYNDLPLN 118
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 119 LTLDNRVAD-----QLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 172
>gi|291233001|ref|XP_002736448.1| PREDICTED: glycine receptor, alpha 1 (startle
disease/hyperekplexia, stiff man syndrome)-like
[Saccoglossus kowalevskii]
Length = 829
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 104/167 (62%), Gaps = 6/167 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPE----MPLAVDEKIELPQ 61
R T+ L+C M +P D QEC +++ES ++TTDD+I QW E AV + I PQ
Sbjct: 544 RFTITLTCMMRLERFPMDEQECKMEIESFAYTTDDVILQWAAEDDDLEAFAVPKGISSPQ 603
Query: 62 LQLVKNKTAD--CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIK 119
+ V ++ Y+TG+F+ L F L+R+ Y+ Y+P+ LIV++SW SFWI
Sbjct: 604 FEFVDATIVKNPITRNYTTGSFSYLTATFRLQRQKEMYIMSNYLPSLLIVVLSWFSFWIN 663
Query: 120 PEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
P + PARV+L +T+LLTL TQ Q ++P +++LKA+D +MSAC V
Sbjct: 664 PNSEPARVSLVMTALLTLCTQMNGIQGTMPKIAHLKAIDVWMSACLV 710
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 103/167 (61%), Gaps = 6/167 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM----PLAVDEKIELPQ 61
RLTL +SC M YP D QEC + +ES S+TTDDLI QW P+ L + + + + Q
Sbjct: 133 RLTLTVSCMMRLERYPMDEQECDMDIESFSYTTDDLILQWAPKADELESLEIRKGLSVAQ 192
Query: 62 LQLVKNKT--ADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIK 119
T ++ Y+TG F+ + F+L+R+ ++ Y+P+ LIV++SW SFWI
Sbjct: 193 FTFFAEHTDRKPKTRNYTTGIFSYVTATFILQRQKKMFIMSNYLPSILIVVLSWFSFWIN 252
Query: 120 PEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
P + PARV+L +T+LLTL TQ Q +LP +++LKA+D +M+ C V
Sbjct: 253 PNSEPARVSLVMTALLTLCTQMNGIQGALPKMAHLKAIDVWMTVCLV 299
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
S T +++L D YDK P G P IV + + S ++ M Y F
Sbjct: 12 SQTKNILSNVLGAD---YDKKFRPNLHGPPVIVTTSILINSFQSSSDSGMDYTVSFFLRT 68
Query: 227 TWKDHRLRL--PENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKD 284
W D RL P N T L D +K +W P +F + K+ F +T N + +Y D
Sbjct: 69 RWVDTRLEYYDPGNHT---LTLHSDGVKEVWIPPLYFPDEKSGHFHKLTTENSLLRIYSD 125
Query: 285 KTILYMVKF 293
T+L+ +
Sbjct: 126 GTVLHSARL 134
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G +V V + + M Y +F W D RLR + +
Sbjct: 437 YDKKFRPNFHGAAVVVTTSVHINSFHATAGTEMDYTVTLFLRTRWNDSRLRY-YDAANHI 495
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
D ++ +W P FF + K+ F +T N + +Y D T+L+ +F
Sbjct: 496 LTFHSDGVREVWIPPLFFPDEKSGHFHKLTTENILLRIYPDGTVLHSARF 545
>gi|156717762|ref|NP_001096421.1| gamma-aminobutyric acid (GABA) A receptor, beta 2 precursor
[Xenopus (Silurana) tropicalis]
gi|301624061|ref|XP_002941329.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like
[Xenopus (Silurana) tropicalis]
gi|134026224|gb|AAI36090.1| LOC100125027 protein [Xenopus (Silurana) tropicalis]
Length = 474
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + E++ELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIGFYWRGGNNAVTGVERLELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ + V+STG++ L + F L+R +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 IDYNLLSRNVVFSTGSYPRLSLSFKLRRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGDPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
>gi|218741191|dbj|BAH03471.1| gamma-aminobutyric acid receptor beta subunit [Lehmannia
valentiana]
Length = 504
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 106/163 (65%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R T L+C M+ YP D QEC++++ES +T DD++ W D + V E + LPQ
Sbjct: 169 RSTTTLACMMDLHNYPLDHQECTVEIESYGYTMDDIVLYWLSDRDAVTGV-EDVSLPQFS 227
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T + + TG++ L +IF L+R +GY++F TY+P+ LIV++SWVSFWI EA+
Sbjct: 228 ISNYATINKIEELLTGDYQRLSLIFQLQRSIGYFIFQTYLPSILIVMLSWVSFWINHEAS 287
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 288 SARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLVMCFV 330
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR-LPENMT 240
K YD P G P + V + DSI E +M Y ++ Q W+D RL+ L E+
Sbjct: 53 KGYDIRLRPSFGGAPLEIGIEVILASFDSISEVNMDYTITMYLKQYWRDERLQFLHESSD 112
Query: 241 SEYRLLEVDWL-----KNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
++ ++ L + +W PD+F N K +T N V LY + +++Y ++
Sbjct: 113 NDQDAIKTMTLTGAFAEKIWVPDTFLANDKNSFLHDVTEKNKMVRLYGNGSLVYGMR 169
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 19/24 (79%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID++SR+ FP+LF + NC YW ++
Sbjct: 478 IDKYSRLLFPLLFVVFNCGYWAIY 501
>gi|291223615|ref|XP_002731805.1| PREDICTED: glycine receptor, alpha 1-like [Saccoglossus
kowalevskii]
Length = 481
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 101/159 (63%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL+L LSC MN +P D +C + + S ++ L W P+AV I+LPQ +L
Sbjct: 182 RLSLTLSCNMNLRWFPMDKHKCKMVLLSYAYDASHLALYWRKVDPVAVYTDIKLPQFELT 241
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
T + Q Y N++ LEV F L+R++G+Y+ TYIP+ L+VI+SWVSFW+ A A
Sbjct: 242 SYTTVEYLQDYGLTNWSFLEVHFTLERQMGFYILTTYIPSALLVILSWVSFWLHMNATAA 301
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV LG+T++LT++TQ ++ SLP VSY A+D +M++C
Sbjct: 302 RVALGITTILTMATQITGARQSLPAVSYPTAIDVWMASC 340
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 190 PKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVD 249
P G P V ++ + DS+ E +M Y+ I+ Q W D RLR N ++ L D
Sbjct: 82 PYFNGPPLNVTCNIFINSFDSVKETTMEYSVTIYLHQRWWDPRLR--HNSSNTITLYSHD 139
Query: 250 WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNI 306
++ N+WRPD +F N K TF +T N + + D + Y ++ ++L C +N+
Sbjct: 140 FIDNIWRPDLYFDNEKKATFHHVTTDNRALSVSSDGEVFYSMR---LSLTLSCNMNL 193
>gi|62917|emb|CAA39969.1| GABA-A receptor,beta-4 subunit [Gallus gallus]
Length = 405
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +T DD++F W + + E +ELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGMEVLELPQFTI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++ + V++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 IEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 314
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 154 LKAVDAFMSACTVSSTSL----TFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLD 209
+ A+ A AC S S +I+ + K YD P G P V + + +D
Sbjct: 13 VSALAALCVACCAQSPSTGNISVVKEIVDKLLKGYDVRLRPDFGGNPVTVGMSIHISSID 72
Query: 210 SIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKA 266
I E +M Y ++F Q+W+D RL LP N+T + R+ + +W PD++F N K
Sbjct: 73 QISEVNMDYTITMYFQQSWRDKRLAYNDLPLNLTLDNRVAD-----QLWLPDTYFLNDKK 127
Query: 267 VTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T+ N + L+ D T+LY ++ A
Sbjct: 128 SFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
>gi|390340440|ref|XP_798340.3| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Strongylocentrotus purpuratus]
Length = 477
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 111/192 (57%), Gaps = 2/192 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT+ SC M+ +P D Q CSL MES +++ DD+ F+W P+ VD KI LPQ + +
Sbjct: 136 RLTVTASCNMDLSTFPFDKQRCSLDMESYAYSEDDVKFKWLENGPVYVDPKISLPQFKFL 195
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ Y GN+T + F L R + YY+ TYIP+ +I +SW+SFWI A PA
Sbjct: 196 DSSVRSRIAEYFVGNYTVVSADFYLGRDITYYVVQTYIPSSMITCLSWLSFWINRNAVPA 255
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACT--VSSTSLTFNDILPEDPKL 183
RV LG+T++LT++T + SLP +SY+KA+D F+ C V + L + ++ D
Sbjct: 256 RVALGITTVLTMTTLVGNAGNSLPKLSYIKAIDLFLGMCYFFVFAALLEYVIVIYYDQPR 315
Query: 184 YDKMRPPKKEGQ 195
Y K R KE Q
Sbjct: 316 YKKARELMKEFQ 327
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + V + I E+ M Y D++F Q W+D RL+ SE
Sbjct: 31 YDKRLRPGFGGPPIDVTVSMYVYSMGPITESKMEYTLDMYFRQQWRDERLQF----DSEV 86
Query: 244 RL-LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
L L + L + W PD + N K+ + T+ N + + +L+ + A
Sbjct: 87 GLALNAETLDSFWVPDIYIINEKSAAYHTVLYKNSLLRIEPTGEMLFSTRLTVTA 141
>gi|267844856|ref|NP_001161175.1| gamma-aminobutyric acid receptor subunit beta-4 isoform 1 precursor
[Gallus gallus]
gi|120775|sp|P24045.1|GBRB4_CHICK RecName: Full=Gamma-aminobutyric acid receptor subunit beta-4;
AltName: Full=GABA(A) receptor subunit beta-4; Flags:
Precursor
Length = 488
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +T DD++F W + + E +ELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGMEVLELPQFTI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++ + V++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 IEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 314
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 154 LKAVDAFMSACTVSSTSL----TFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLD 209
+ A+ A AC S S +I+ + K YD P G P V + + +D
Sbjct: 13 VSALAALCVACCAQSPSTGNISVVKEIVDKLLKGYDVRLRPDFGGNPVTVGMSIHISSID 72
Query: 210 SIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKA 266
I E +M Y ++F Q+W+D RL LP N+T + R+ + +W PD++F N K
Sbjct: 73 QISEVNMDYTITMYFQQSWRDKRLAYNDLPLNLTLDNRVAD-----QLWLPDTYFLNDKK 127
Query: 267 VTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T+ N + L+ D T+LY ++ A
Sbjct: 128 SFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
>gi|449275751|gb|EMC84519.1| Gamma-aminobutyric acid receptor subunit beta-3, partial [Columba
livia]
Length = 422
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 106/165 (64%), Gaps = 4/165 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 97 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSI 156
Query: 65 VKNKTADCSQVYSTGNFTC---LEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
V+ + + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +
Sbjct: 157 VEYRLVSKNVVFATGKYCAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYD 216
Query: 122 AAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A+ ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 217 ASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 261
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPENMTSEYRLLEVDW 250
G P V ++ + +D + E +M Y ++F Q W+D RL +P N+T + R+ +
Sbjct: 1 GPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLNLTLDNRVAD--- 57
Query: 251 LKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 58 --QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 102
>gi|348530593|ref|XP_003452795.1| PREDICTED: glycine receptor subunit beta [Oreochromis niloticus]
Length = 500
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 114/162 (70%), Gaps = 5/162 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TT DL+F W + P+ +DE I LPQ +
Sbjct: 176 RLSVTLSCPLDLTLFPMDTQLCKMQLESFGYTTSDLVFMWQSD-PVQMDE-IALPQFDIK 233
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ K +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 234 QEDIKYGNCTKYYQGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 293
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+LS++ + LP VSY+KA+D ++ AC
Sbjct: 294 SAARVPLGILSVLSLSSESMSLASELPKVSYVKAIDIWLIAC 335
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P ++ + SI E +M Y +IF Q W D RL+LP + SE
Sbjct: 68 YDPRIRPNFQGIPVESRVNIFINSFGSIQETTMDYRVNIFLRQRWNDPRLQLPTDYKSEA 127
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
++ + +W+PD FF N K F +T N ++++++ +L
Sbjct: 128 LTVDPKMFQCLWKPDLFFANEKNANFHDVTQDNILLFIFRNGDVL 172
>gi|267844858|ref|NP_001161176.1| gamma-aminobutyric acid receptor subunit beta-4 isoform 2 precursor
[Gallus gallus]
Length = 484
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +T DD++F W + + E +ELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGMEVLELPQFTI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++ + V++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 IEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 314
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 154 LKAVDAFMSACTVSSTSL----TFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLD 209
+ A+ A AC S S +I+ + K YD P G P V + + +D
Sbjct: 13 VSALAALCVACCAQSPSTGNISVVKEIVDKLLKGYDVRLRPDFGGNPVTVGMSIHISSID 72
Query: 210 SIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKA 266
I E +M Y ++F Q+W+D RL LP N+T + R+ + +W PD++F N K
Sbjct: 73 QISEVNMDYTITMYFQQSWRDKRLAYNDLPLNLTLDNRVAD-----QLWLPDTYFLNDKK 127
Query: 267 VTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T+ N + L+ D T+LY ++ A
Sbjct: 128 SFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
>gi|345779693|ref|XP_003431881.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1 [Canis
lupus familiaris]
Length = 663
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 342 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 401
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 402 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 461
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 462 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 503
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)
Query: 199 VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMW 255
V V V L I E M Y ++F Q+WKD RL +P N+T + R+ + +W
Sbjct: 251 VGVKVRVSQLQLISEIEMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVAD-----QLW 305
Query: 256 RPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNI 306
PD++F N K +T+ N + L+ D T+LY ++ A C++++
Sbjct: 306 VPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA---CMMDL 353
>gi|156365721|ref|XP_001626792.1| predicted protein [Nematostella vectensis]
gi|156213681|gb|EDO34692.1| predicted protein [Nematostella vectensis]
Length = 280
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 99/165 (60%), Gaps = 4/165 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLA----VDEKIELPQ 61
RLT+ ++C + ++PHD Q C + +ES + D+ ++W+ + E +E+PQ
Sbjct: 77 RLTITMACKLTLQMFPHDVQVCEMMLESYGYQATDVYYRWNSRNSTGDVVYISEDLEMPQ 136
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
++ K + + +Y+ G + L F RRLGYY+ TYIP+ L V +SW SFWI P+
Sbjct: 137 FKITNVKLEERTNIYNIGPHSALIAKFTFHRRLGYYMIQTYIPSMLTVTISWFSFWISPD 196
Query: 122 AAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
+ PARV LG+T++LT+ T ++A LP VSY KA+D F+ C V
Sbjct: 197 SPPARVGLGITTVLTMITISNSARAPLPKVSYTKAIDWFLLMCLV 241
>gi|405951682|gb|EKC19575.1| Glycine receptor subunit alpha-3 [Crassostrea gigas]
Length = 368
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 108/182 (59%), Gaps = 16/182 (8%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--------------- 45
+T RL+L LSC M+ YP D Q C ++MES S+ D++I +W
Sbjct: 74 ITYTVRLSLTLSCPMDLRNYPFDKQVCRIEMESFSYNEDNIILEWVGTDRPDLANMTQMP 133
Query: 46 DPEMPLAVDEKIELPQLQLVKNKTADC-SQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIP 104
+ +P+ + + IE+ Q ++V+ +T ++ GN + L+ F L R +GYYL YIP
Sbjct: 134 EGAVPVEISDNIEMNQFRVVEKRTLKTLNERRGAGNHSLLQAEFHLVRDIGYYLVQMYIP 193
Query: 105 TCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ LIV++SW+SFW+ A P R++LGV ++LT++ Q + A+LP VSY KA+D +MS C
Sbjct: 194 SMLIVMLSWISFWLNVNAVPGRISLGVLTVLTMTQQSSTVNATLPRVSYTKAIDIWMSMC 253
Query: 165 TV 166
V
Sbjct: 254 LV 255
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVD--WLKNMWRPDSFFKNAKAVTFQTMT 273
M + I W D R + + +LE D L N+W PD FF N K+ +
Sbjct: 1 MDFTVSIMLHLNWNDTRFITWTSGYDDTFVLEFDSKRLDNIWTPDLFFPNEKSAFIHKVF 60
Query: 274 IPNHYVWLYKDKTILYMVKF 293
+PN + +Y + I Y V+
Sbjct: 61 MPNKMLRVYTNGKITYTVRL 80
>gi|291233003|ref|XP_002736449.1| PREDICTED: glycine receptor alpha 2-like [Saccoglossus kowalevskii]
Length = 401
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 102/168 (60%), Gaps = 8/168 (4%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPE----MPLAVDEKIELPQ 61
R T+KL C M YP D Q C++++ES ++TTDDLI QW PE L V E I LPQ
Sbjct: 143 RFTIKLGCMMKLERYPMDEQTCNMEIESFTYTTDDLILQWAPEDDDLEALGVQEGISLPQ 202
Query: 62 LQLVKNKTADCSQV---YSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWI 118
K+ D S+ Y+TGNF+ L L+R+ ++ Y+P+ LIVI+SW SFWI
Sbjct: 203 FTF-KDMEPDRSRTTRHYATGNFSYLIAKLRLRRQQEIFIMSAYVPSTLIVIVSWFSFWI 261
Query: 119 KPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
P PARV+L + +LLTL TQ QA P ++++KA D +MS+C V
Sbjct: 262 NPNCEPARVSLVMMALLTLCTQMNGIQAKAPNIAHMKASDVWMSSCLV 309
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK+ P EG P IV + + S + M Y IF W D RL+ +
Sbjct: 36 YDKILRPNMEGPPVIVTTSIHINNFYSSTDKGMDYTTTIFLRTRWNDPRLQY-NGAPNHT 94
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L D +K +W P F+ + K+ F +T N + +Y D T+L+ +F
Sbjct: 95 ITLHSDGVKEVWVPPLFYPDEKSGHFHKLTTENILLRIYPDGTVLHSARF 144
>gi|47219404|emb|CAG01567.1| unnamed protein product [Tetraodon nigroviridis]
Length = 451
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD++F W + + +K+ELPQ +
Sbjct: 130 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDNAVTGVDKLELPQFSI 189
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V + ++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 190 VDIRLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASA 249
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 250 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 291
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---N 238
K YD P G P IV + + +DSI E +M Y ++F Q+W+D RL E N
Sbjct: 22 KGYDIRLRPDFGGPPVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYGELKLN 81
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 82 LTLDNRVAD-----QLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 135
>gi|24943213|gb|AAN65376.1| GABA-A receptor subunit [Caenorhabditis elegans]
Length = 550
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 108/163 (66%), Gaps = 4/163 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD--EKIELPQLQ 63
RLT LSC+MN + D+Q C++++ES +TT +++ +W+ PLAV E+ ++PQ
Sbjct: 173 RLTSTLSCSMNLRNFSLDSQNCTVEIESYGYTTSEVLMKWN--YPLAVHGVEQADVPQFT 230
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T D +TG++ L ++F L+R +GY++F TY+P LIV++SWVSFWI EA
Sbjct: 231 ITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFETYLPCDLIVMLSWVSFWINHEAT 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + SLP +SY+K++D ++ C V
Sbjct: 291 SARVALGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFV 333
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%)
Query: 190 PKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVD 249
P G ++ + + DSI E M Y ++ Q W D RLR + + L +
Sbjct: 71 PGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDEMTLSGE 130
Query: 250 WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+ +N+W PD+F N K +T N + + D + Y ++
Sbjct: 131 FSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRL 174
>gi|115361507|gb|ABI95854.1| GABA-alpha subunit [Lepeophtheirus salmonis]
Length = 478
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 101/160 (63%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
RLT+ SC M+ +P D Q C +++ES +T D+ ++W+ + + + + LPQ ++
Sbjct: 129 RLTITASCPMDLQYFPMDRQLCYIEIESFGYTMSDIRYKWNDGLNSVQISSDVSLPQFKV 188
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ ++ STGN++ L R +GYYL YIP+ LIVI+SWVSFW+ AAP
Sbjct: 189 LGHRQKTIEASLSTGNYSRLACEIQFVRSMGYYLIQIYIPSSLIVIISWVSFWLNRGAAP 248
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LGVT++ T++T A + A+LP +SY+K++D ++ AC
Sbjct: 249 ARVGLGVTTVHTMTTLMASTNAALPKISYVKSIDVYLGAC 288
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Query: 170 SLTFND-----ILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFF 224
S FND IL YDK P G P V + ++ + S+ E M + D++F
Sbjct: 2 SGNFNDVNISAILNSFQMGYDKRVRPNYGGPPVTVGVTMYILSISSVSEVMMDFTLDMYF 61
Query: 225 AQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKD 284
Q W+D RL E ++ ++++ +W PD+FF N K F T N ++ +
Sbjct: 62 RQFWQDPRLSFTGRPGLEKLVVGAEYIRLIWVPDTFFVNEKTAYFHKATTENQFLRILHT 121
Query: 285 KTILYMVKFVFMA 297
IL ++ A
Sbjct: 122 GEILRSIRLTITA 134
>gi|25395285|pir||C87791 protein B0207.12 [imported] - Caenorhabditis elegans
Length = 654
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 104/177 (58%), Gaps = 18/177 (10%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TT D+ ++W + P+ + + LP +
Sbjct: 163 RLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKEKKPIQQKDGLRQSLPSFE 222
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYL----------------FHTYIPTCL 107
L T C+ + +TG ++CL VL+R YYL F YIP+ +
Sbjct: 223 LQDVVTDYCTSLTNTGEYSCLRTRMVLRREFSYYLLQVPLYCPLKLVPNVPFQLYIPSFM 282
Query: 108 IVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+VI+SWVSFW+ ++ PARVTLGVT+LLT++TQ + A LPPVSY KA+D ++ C
Sbjct: 283 LVIVSWVSFWLDKDSVPARVTLGVTTLLTMTTQSSGINAKLPPVSYTKAIDVWIGVC 339
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 63/90 (70%)
Query: 75 VYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSL 134
VY ++C V+ L+R YYL YIP ++V++SWVSFW+ +A PARV+LGVT+L
Sbjct: 458 VYFECEYSCARVVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTL 517
Query: 135 LTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
LT++TQ + + LPPVSY+KAVD ++ C
Sbjct: 518 LTMTTQASGINSKLPPVSYIKAVDVWIGVC 547
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPENMTSEYRLLEV-- 248
G P +V ++ + + ID+ +M Y+A F + W D RL R E+ +E V
Sbjct: 55 GGPVLVTVNIYLRSISKIDDVNMEYSAQFTFREEWTDQRLAYERYEESGDTEVPPFVVLA 114
Query: 249 -----DWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
D + +W PD+FF+N K + PN + ++K+ ILY V+
Sbjct: 115 TSENADQSQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVRL 164
>gi|260796363|ref|XP_002593174.1| hypothetical protein BRAFLDRAFT_72747 [Branchiostoma floridae]
gi|229278398|gb|EEN49185.1| hypothetical protein BRAFLDRAFT_72747 [Branchiostoma floridae]
Length = 396
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 94/161 (58%), Gaps = 7/161 (4%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+L+ LSC MNF +P DTQ C +QMES +TTDDL +W PL ++ I LP+ L
Sbjct: 133 KLSFLLSCPMNFQTFPFDTQRCGIQMESYGYTTDDLSLEWAEPEPLEINSNIRLPEYDLG 192
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K+ C Y T F +L RR +Y+ ++P +VI+SW+SFWI P++ PA
Sbjct: 193 DWKSFQCDVKYLTATF-------ILSRRFEHYILQAFLPCIFLVILSWMSFWISPDSVPA 245
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV LG+T++L T + S + P +SY +A+D +M C V
Sbjct: 246 RVALGITTMLASITLSSYSNGATPRLSYTRAIDIYMLTCAV 286
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRL----PENM 239
YDK P G V + V GL SI ++ M Y F Q W D RLR PE +
Sbjct: 22 YDKRFRPNFRGSNVRVIVQMYVNGLSSISDSEMDYKLIFFLRQRWNDPRLRYGNFEPE-V 80
Query: 240 TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
T + L+ L ++W PD FF+N K + + +Y IL+ K F+
Sbjct: 81 TQPFVTLDESALADLWVPDVFFENGKGAAYPEGKEHTTLIRIYPSGDILFTRKLSFL 137
>gi|325297029|ref|NP_001191519.1| GluClAc1 precursor [Aplysia californica]
gi|253918123|gb|ACT37243.1| GluClAc1 [Aplysia californica]
Length = 422
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 105/165 (63%), Gaps = 9/165 (5%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPE---MPLAVDEKI----E 58
RL+L LSC M YP DTQ C + ++S ++TT++++F W + P+ D +I E
Sbjct: 162 RLSLTLSCRMLLQKYPLDTQRCPMLIQSYTYTTENVMFYWKADEGTHPITHDAEIALNTE 221
Query: 59 LPQLQLVKNKTADCSQV--YSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSF 116
LPQ +V N T C+ T F C++ F LKR +G+Y+ Y+P+ LIV +SWVSF
Sbjct: 222 LPQFSIVDNTTESCNGTMDVETPKFACIKAHFTLKRDIGFYIIQVYVPSILIVALSWVSF 281
Query: 117 WIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
W+ +A PARV+LGV ++LTL+T + Q+ LP VSY+KA+D ++
Sbjct: 282 WLDLDAIPARVSLGVLTVLTLNTHGSNVQSQLPKVSYIKAIDVWV 326
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 184 YDKMRPPK-KEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD PP +E PT V + ++ DS+ E +M Y+ +++ + TW D RL S
Sbjct: 53 YDPRVPPDYEEEHPTNVSIRIHLLSFDSVSETTMDYSVELYLSMTWMDVRLNYTLLHNSS 112
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+ ++ + +W PD +F+N K +F +T+PN Y+ LY++ + Y ++
Sbjct: 113 WLEVDTKMMDLVWVPDVYFRNEKEASFHDVTVPNKYMHLYREGEVKYSMRL 163
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 293 FVFMALMEYCLVNIVL--GDSDLPKPPEPAKQDKIFELAAKENARLLTGQPMIPPNHQQA 350
FVF AL+E+ VN++ GD +L A Q + K++ + G P P H
Sbjct: 332 FVFAALLEFAYVNVLARRGDKELV-----ATQVFRIPMENKDSRFEVNGNP---PRHLHI 383
Query: 351 QRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYW 385
R R R R ID+ SR+ FP F I N YW
Sbjct: 384 GRPAPSRMRAR--KIDKISRIVFPGCFVIFNMVYW 416
>gi|390339011|ref|XP_782093.3| PREDICTED: glycine receptor subunit alpha-3-like
[Strongylocentrotus purpuratus]
Length = 492
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 101/159 (63%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++KLSCAM+F +P DTQ+C++ ++S TT DL+ W + + LPQ +
Sbjct: 153 RLSVKLSCAMDFHRFPMDTQKCNMDLQSFGLTTSDLVLLWGAQKLEFHSHHMRLPQYYMT 212
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
DC++ G F+C+ F L+R LGYY+ +IP+ +V++SWV+FWI A+PA
Sbjct: 213 GVDFFDCTEQRYNGIFSCVRAQFTLERTLGYYMLQAFIPSIALVMVSWVTFWIDVRASPA 272
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV LGVT +L++ ++ + +PPVSYLKA+D + ++C
Sbjct: 273 RVGLGVTIILSVISKTNGVRLDIPPVSYLKAIDVWYTSC 311
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 40/104 (38%), Gaps = 3/104 (2%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G V+ V + LD IDE + Y+ Q W D RL T
Sbjct: 48 YDSRVRPCVNGDAVHVFLDVFLASLDGIDEKHLDYSITATIHQRWHDPRLTFNGTTTLPP 107
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTI 287
VD +W P+ NAK V ++ N YV + D +
Sbjct: 108 TAYLVD---RVWHPNIVIGNAKEVLLHHISDTNQYVTVDWDGNV 148
>gi|345328452|ref|XP_001514286.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Ornithorhynchus anatinus]
Length = 597
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +T DD++F W + + E +ELPQ +
Sbjct: 261 RITTTAACMMDLRRYPLDQQNCTLEIESYGYTIDDIVFFWQGNDSAVTGIEVLELPQFTI 320
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++ + V++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 321 IEQRLVTREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASA 380
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 381 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 422
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---N 238
K YD P G P V + + +D I E +M Y ++F Q+W+D RL + N
Sbjct: 153 KGYDVRLRPDFGGNPVTVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLAYNDIALN 212
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 213 LTLDNRVAD-----QLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 266
>gi|324518682|gb|ADY47173.1| Glutamate-gated chloride channel, partial [Ascaris suum]
Length = 379
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 102/163 (62%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RLTL L+C MN + YP D QEC + S ++TT D+I++WD ++ ++VDE LP
Sbjct: 162 RLTLILACNMNLIRYPMDVQECLIDFASYAYTTSDIIYKWD-QVGISVDEGANGALPNFV 220
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ K + C + +TG ++CL V L R ++L YIP+ ++V +SWVS+WI ++
Sbjct: 221 ISAYKNSTCDSITNTGTYSCLRVELKLSRVFSFFLLQLYIPSAMLVGVSWVSYWIDWKST 280
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV L + +LLT+ TQ ++LPPVSY KA+D ++ AC V
Sbjct: 281 AARVPLAIVTLLTMITQSHAINSNLPPVSYTKAIDIWIGACVV 323
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 189 PPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYR---L 245
P + P IV + + + ++ E +M + A F Q W D RLR E+ S++R
Sbjct: 58 PISDQKGPVIVRTSLFIRSISAVSERNMEFVAQFRFQQEWFDDRLRFTEH--SDFRNFDF 115
Query: 246 LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVN 305
+ V + +W PD+FF+N + + + N ++ + D ++Y + + L+ C +N
Sbjct: 116 IHVARDQLLWTPDTFFQNERNGWYHMLDQENKFIKVRSDGKVIYNRR---LTLILACNMN 172
Query: 306 IV 307
++
Sbjct: 173 LI 174
>gi|449273441|gb|EMC82935.1| Gamma-aminobutyric acid receptor subunit beta-1, partial [Columba
livia]
Length = 397
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + IELPQ +
Sbjct: 74 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGESAVTGVNNIELPQFSI 133
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 134 VDYKMVSKRVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 193
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 194 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 235
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 218 YAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y ++F Q+W+D RL +P N+T + R+ + +W PD++F+N K +T+
Sbjct: 2 YTLTMYFQQSWRDKRLSYAGIPLNLTLDNRVAD-----QLWVPDTYFQNDKKSFVHGVTV 56
Query: 275 PNHYVWLYKDKTILYMVKFVFMA 297
N + L+ D T+LY ++ A
Sbjct: 57 KNRMIRLHPDGTVLYGLRITTTA 79
>gi|291234073|ref|XP_002736976.1| PREDICTED: glycine receptor, alpha 2-like [Saccoglossus
kowalevskii]
Length = 667
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 105/168 (62%), Gaps = 8/168 (4%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM----PLAVDEKIELPQ 61
R T+ LSC M+ YP D Q C++++ES S+TT DLI QW P+ V E I LPQ
Sbjct: 159 RFTITLSCMMHLERYPMDEQTCNMEIESFSYTTVDLILQWAPDGDTLEAFGVREGISLPQ 218
Query: 62 LQLVKNKTADCSQV---YSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWI 118
+ T D S+ ++TGNF+ L L+R+ ++ +Y+P+ LIV++SW SFWI
Sbjct: 219 FRF-NQATPDRSRTTRNFTTGNFSYLTATISLQRQKELFIMSSYLPSLLIVVLSWFSFWI 277
Query: 119 KPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
P + PARV+L +T+LLTL TQ QA++P V++L A+D +MS C V
Sbjct: 278 NPNSEPARVSLVMTALLTLCTQMNGIQATVPRVAHLNAIDVWMSVCLV 325
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 88/139 (63%), Gaps = 6/139 (4%)
Query: 34 LSHTTDDLIFQWDPE----MPLAVDEKIELPQLQLVKNKTAD--CSQVYSTGNFTCLEVI 87
+++TTDD+I QW E AV + I LPQ + V ++ Y+TG+F+ L
Sbjct: 431 VAYTTDDVILQWAAEDDDLEAFAVPQGISLPQFEFVDATIVRELITRNYTTGSFSHLTAT 490
Query: 88 FVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQAS 147
F L+R+ ++ Y+P+ LIV++SW SFWI P + PARV+L +T+LLTL TQ Q +
Sbjct: 491 FRLQRQKEMFILSNYLPSLLIVVLSWFSFWINPNSEPARVSLVMTALLTLCTQMNGIQGT 550
Query: 148 LPPVSYLKAVDAFMSACTV 166
+P +++LKA+D +MSAC V
Sbjct: 551 MPKIAHLKAIDVWMSACLV 569
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P IV V + S + M Y +F W D RL N ++
Sbjct: 52 YDKKYRPNVHGPPVIVTASVLINSFYSSTDTGMDYTVTLFLRTRWVDPRLEYT-NDKNQT 110
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L D +W P +F + K+ F +T N + +Y D T+L+ +F
Sbjct: 111 LTLHSDGDNEVWVPPLYFPDEKSGQFHKLTTENVLLRIYPDGTVLHSARF 160
>gi|395542827|ref|XP_003773326.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Sarcophilus harrisii]
Length = 475
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E ++ IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGESAVSGVNNIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|349987495|dbj|GAA36399.1| glycine receptor subunit beta [Clonorchis sinensis]
Length = 503
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 104/162 (64%), Gaps = 3/162 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
++T++L+C M+ +P DTQEC + + S +T + L F W E P+ + +++ +
Sbjct: 145 KITMRLACQMHLRTFPMDTQECDMDIGSYGYTLEQLRFVWRNETPVTLPRDLQISEFDPP 204
Query: 66 KNKTA-DCSQVY--STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ DCS +Y +TG +TCL V F+L R++GY+L TYIP LI+++SW++FW+ PEA
Sbjct: 205 EEMIPHDCSSLYKTTTGQYTCLNVTFLLSRQIGYWLASTYIPNTLIMVVSWLNFWVSPEA 264
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV L + +LL + TQ ++LP VSY+KA+D + AC
Sbjct: 265 VPARVNLSLLTLLGVITQTTSYASTLPRVSYIKAIDVWTIAC 306
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN-MTS 241
YD K+RP + T+V ++++ + S+D +M Y D+ Q W+D RL N S
Sbjct: 33 YDVKVRPSEYTQNETVVTVYISISAITSVDVMNMQYTVDMLLRQEWRDPRLAWDHNPRYS 92
Query: 242 EY--RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
Y ++ + +W PD FF+N K +T N + + + +LY K
Sbjct: 93 NYTKNIVSPTFKTKIWIPDLFFRNGKEGRLHKITCENLLIRIQPNGDVLYSQKI 146
>gi|126331665|ref|XP_001364516.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Monodelphis domestica]
Length = 475
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E ++ IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGESAVSGVNNIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|301619763|ref|XP_002939256.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Xenopus (Silurana) tropicalis]
Length = 492
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD--EKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +T DD+ F W AV +ELPQ
Sbjct: 159 RITTTAACMMDLRRYPLDQQNCTLEIESYGYTIDDIKFFWQGGEEAAVTGVSALELPQFT 218
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+++ + + V++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 219 IIETRLVSKNVVFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDAS 278
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 279 AARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 321
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V + + +D I E +M Y ++F Q+W+D RL LP N
Sbjct: 51 KGYDIRLRPDFGGDPVSVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLAYTALPLN 110
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 111 LTLDNRVAD-----QLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 164
>gi|90076504|dbj|BAE87932.1| unnamed protein product [Macaca fascicularis]
Length = 341
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 107 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 166
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SW+SFWI +A+
Sbjct: 167 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWMSFWINYDASA 226
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 227 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 268
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 193 EGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVD 249
EG P + + V +D + E +M Y ++F Q+WKD RL +P N+T + R+ +
Sbjct: 10 EGPPWTLGCRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVAD-- 67
Query: 250 WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 68 ---QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 112
>gi|449500680|ref|XP_002194324.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1
[Taeniopygia guttata]
Length = 442
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + IELPQ +
Sbjct: 121 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGESAVTGVNNIELPQFSI 180
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 181 VDYKMVSKRVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 240
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 241 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 282
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPENMT 240
YD P G P V + + +D + E +M Y ++F Q+W+D RL +P N+T
Sbjct: 15 YDIRLRPDFGGPPVDVGMRIEIASIDVVSEVNMDYTLTMYFQQSWRDKRLSYSGIPLNLT 74
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ R+ + +W PD++F+N K +T+ N + L+ D T+LY ++ A
Sbjct: 75 LDNRVAD-----QLWVPDTYFQNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 126
>gi|391329925|ref|XP_003739417.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-like [Metaseiulus occidentalis]
Length = 556
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 108/164 (65%), Gaps = 5/164 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
RLT+ SC M+ +P D Q C++++ES +T D+ ++W + E + + +++ELPQ ++
Sbjct: 143 RLTVTASCPMDLRYFPMDRQSCTIEIESFGYTMKDISYRWSEGEKSVRISKEVELPQFKV 202
Query: 65 VKNKTADCSQVYSTGNFTCL--EVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ + + V STGN++ L E+ FV R +GYYL YIP LIV++SWVSFW+ A
Sbjct: 203 LGHSQRSKAVVLSTGNYSRLVCEIRFV--RSMGYYLIQIYIPAGLIVVISWVSFWLHRNA 260
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
PARV LGVT++ T++T + + A+LP +SY+K++D ++ C V
Sbjct: 261 TPARVALGVTTVSTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 304
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTS 241
+ YDK P G P V + ++ + ++ E M + +D +F Q W+D RL +
Sbjct: 33 RGYDKRVRPNYGGLPVDVGVTMQIISISTVSEVQMDFTSDFYFRQRWRDERLSFAKLPDL 92
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
E + + + +W PD+FF N K+ F T T PN ++ + + +L ++ A
Sbjct: 93 ESMTVGAEVAEKIWVPDTFFANEKSAYFHTATTPNTFLRISHNGDVLRSIRLTVTA 148
>gi|334350266|ref|XP_001376986.2| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Monodelphis domestica]
Length = 480
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +T DD++F W + + + +ELPQ +
Sbjct: 150 RITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFYWQGNDSAVTGMDTLELPQFTI 209
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++ + V++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 210 MEQRLVTREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSVLITILSWVSFWINYDASA 269
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 270 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFV 311
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---N 238
K YD P G P V + + +D I E +M Y ++F Q+W+D RL + N
Sbjct: 42 KGYDVRLRPDFGGDPVTVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLAYSDFDFN 101
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 102 LTLDNRVAD-----QLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 155
>gi|395546003|ref|XP_003774884.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-4-like
[Sarcophilus harrisii]
Length = 458
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +T DD++F W + + + +ELPQ +
Sbjct: 128 RITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFYWQGNDSAVTGMDTLELPQFTI 187
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++ + V++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 188 MEQRLVTREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSVLITILSWVSFWINYDASA 247
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 248 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFV 289
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---N 238
K YD P G P V + + +D I E +M Y ++F Q+W+D RL + N
Sbjct: 20 KGYDVRLRPDFGGNPVTVGMSIHISSIDQISEVNMDYTITMYFQQSWRDKRLAYSDFDFN 79
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 80 LTLDNRVAD-----QLWLPDTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 133
>gi|327281228|ref|XP_003225351.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Anolis carolinensis]
Length = 447
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E ++ KIELPQ +
Sbjct: 127 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGESAVSGVSKIELPQFSI 186
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ + ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 187 MDYRMISKRVEFATGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 246
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 247 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 288
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + + +D + E +M Y ++F Q+W+D RL +P N
Sbjct: 19 KGYDIRLRPDFGGSPVDVGMRIEIASIDMVSEVNMDYTLTMYFQQSWRDKRLSYSGIPLN 78
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + N+W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 79 LTLDNRVAD-----NLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 132
>gi|405961182|gb|EKC27023.1| Glycine receptor subunit alpha-2 [Crassostrea gigas]
Length = 331
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 107/164 (65%), Gaps = 6/164 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPL--AVDEKIE--LPQ 61
RL+L LSC M+ +P D Q CS+ MES ++ +++ +W+P+ P+ +D+ E LPQ
Sbjct: 136 RLSLTLSCIMDLRFFPMDDQTCSIFMESYGYSIENVALKWNPDDPVIFGLDDNDEQTLPQ 195
Query: 62 LQLVKN-KTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIK 119
K +T CS V S F+CLE +R LG+Y+ +IP+ +IVI+SW+SFWI
Sbjct: 196 FYFYKPLETKGCSTVNSFNTEFSCLEAKLFFQRNLGFYMSQVFIPSMMIVILSWISFWIH 255
Query: 120 PEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSA 163
+A PARV+LGV +LT++TQ + ++SLP VSY+KA+D +M+
Sbjct: 256 VDAVPARVSLGVICVLTMTTQSSGIRSSLPVVSYIKAIDIWMAV 299
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 66/126 (52%), Gaps = 18/126 (14%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++ P ++ T V + V +DSI+ SMT W+D RL S
Sbjct: 37 YDARIAPDYEKDVATEVDVQLFVTSIDSINAISMT----------WRDSRLNFSH--ISN 84
Query: 243 YRLLEVDW--LKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALME 300
+LE+D + ++W PD++F+N K+ + T+T+PN +Y D ++Y ++ ++L
Sbjct: 85 ISVLELDQRRIDDVWVPDTYFQNEKSASVHTVTVPNKLFHIYNDGFVIYSIR---LSLTL 141
Query: 301 YCLVNI 306
C++++
Sbjct: 142 SCIMDL 147
>gi|156374042|ref|XP_001629618.1| predicted protein [Nematostella vectensis]
gi|156216622|gb|EDO37555.1| predicted protein [Nematostella vectensis]
Length = 424
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 104/162 (64%), Gaps = 3/162 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAVDEKI-ELPQL 62
R+T+K SCAMN ++P D Q C++ +ES ++ D++ +QW+ + +AV++KI ++PQ
Sbjct: 122 RVTVKASCAMNLRMFPKDVQNCNIDIESYGYSADNVQYQWENRSDNGIAVNKKIRDMPQY 181
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
L + +Y GN++ L F +RR GY++ H Y P LIVI+SW+SF I PE+
Sbjct: 182 NLSDINVSRHFTMYVAGNWSGLTATFRFRRRSGYFIIHIYAPCALIVILSWISFCIPPES 241
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
AR+ LG+TS+LT++T S+P VSY+KAVD ++ C
Sbjct: 242 TAARIALGITSVLTITTILNMLNNSMPKVSYVKAVDWYLIGC 283
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
TSL N I DP+L P G P V V+ +D+I+ M Y D F Q W
Sbjct: 7 TSLLDNLIQGYDPRL-----RPDFGGDPVTVTVGFWVLSIDAINVIDMDYRMDFFLRQLW 61
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D RL+ + + L L +W PD++F N+K F ++T N + + D +
Sbjct: 62 RDPRLK---HRFDDTLALSNTMLDKIWVPDTYFVNSKMSKFHSVTTINKMLSISPDGLVH 118
Query: 289 Y 289
Y
Sbjct: 119 Y 119
>gi|354495036|ref|XP_003509638.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-2-like,
partial [Cricetulus griseus]
Length = 340
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 103/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 134 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 192
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 193 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 252
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+ ++ C V
Sbjct: 253 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIYMYLMGCFV 295
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 26 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 85
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 86 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 139
>gi|291385738|ref|XP_002709463.1| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Oryctolagus cuniculus]
Length = 482
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ S +TTDD+ F W+ E + KIELPQ +
Sbjct: 162 RITTTAACMMDLRRYPLDEQNCTLKINSYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 221
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 222 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 281
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 282 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 323
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 196 PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLK 252
P V + V +D + E +M Y ++F Q+WKD RL +P N+T + R+ +
Sbjct: 68 PVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVAD----- 122
Query: 253 NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 123 QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 167
>gi|9795254|gb|AAF97816.1| GABA-A receptor beta subunit [Sepia officinalis]
Length = 486
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R T L+C M+ YP D Q C++++ES +T D+I W + + + E +ELPQ +
Sbjct: 155 RFTTTLACMMDLHYYPLDEQNCTVEVESYGYTMFDVIMYWRNGKNAVMGVENVELPQFHI 214
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ KT + T N+ L + F L+R +GY++F TY+P+ LIV++SWVSFWI EA
Sbjct: 215 KEYKTVVTIEKLMTPNYQRLSLSFKLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEATS 274
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 275 ARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLVVCFV 316
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTS 241
K YD P+ E Q + + + DSI E +M Y ++ Q W D RL + N +
Sbjct: 46 KGYDIRLRPQFEVQALRIGMEIIIASFDSISEVNMDYTITMYLNQYWTDERL-VYSNDSD 104
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+ L D+ + +W PD+FF N K +T N + L+ + +I+Y ++F
Sbjct: 105 DNLTLTGDFAEKIWVPDTFFANDKNSFLHDITEKNKMIRLFGNGSIVYGMRF 156
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 348 QQAQRNLAQRA-RTRAIN-IDRFSRVFFPVLFAILNCTYWIMF 388
+Q +N+ R R + +N ID+++R+FFP+LF I N +YW +
Sbjct: 441 RQKAKNIKVRMPRVQDVNTIDKYARLFFPLLFIIFNISYWAFY 483
>gi|194374465|dbj|BAG57128.1| unnamed protein product [Homo sapiens]
Length = 404
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 101/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 84 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 143
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 144 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 203
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++ T++T + +LP + Y+KA+D ++ C V
Sbjct: 204 ARVALGITTVHTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 245
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 215 SMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQT 271
S Y ++F Q+WKD RL +P N+T + R+ + +W PD++F N K
Sbjct: 9 SEDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHG 63
Query: 272 MTIPNHYVWLYKDKTILYMVKFVFMA 297
+T+ N + L+ D T+LY ++ A
Sbjct: 64 VTVKNRMIRLHPDGTVLYGLRITTTA 89
>gi|391325188|ref|XP_003737121.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit beta-like [Metaseiulus occidentalis]
Length = 563
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 106/164 (64%), Gaps = 5/164 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
RLT+ SC M+ +P D Q C++++ES +T D+ ++W D + + + +++ELPQ ++
Sbjct: 177 RLTVTASCPMDLRFFPMDRQSCTIEVESFGYTMSDIRYKWKDGPISIGISKEVELPQFKV 236
Query: 65 VKNKTADCSQVYSTGNFTCL--EVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ + STGN++ L EV FV R +GYYL YIP LIV++SWVSFW+ A
Sbjct: 237 LGHVQKISEVSLSTGNYSRLICEVRFV--RSMGYYLIQIYIPASLIVVISWVSFWLHRNA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
PARV+LGV ++LT++T + + + LP +SY+K++D F+ C V
Sbjct: 295 TPARVSLGVMTVLTMTTLMSSTNSQLPKISYVKSIDVFLGTCFV 338
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTS 241
K YDK P G P V + ++ + ++ E M + +D +F Q W+D RL ++
Sbjct: 67 KGYDKRVRPNYGGNPVEVGVSMQIVSISTVSEVQMDFTSDFYFRQAWRDERLSFVKSNDL 126
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ + + +W PD+FF N K F T PN ++ + + + ++ A
Sbjct: 127 DQMTVGAEVANKIWVPDTFFANEKTAYFHVATTPNTFLRISSEGEVYRSIRLTVTA 182
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMF 388
NID++SRV FPV F N TYW+++
Sbjct: 524 NIDKYSRVVFPVCFVCFNLTYWVIY 548
>gi|405970338|gb|EKC35252.1| Glycine receptor subunit alpha-2 [Crassostrea gigas]
Length = 404
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 104/161 (64%), Gaps = 3/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+ + LSCAM YP D Q C + +ES S+T +++ F W+ P+ + I LPQ +
Sbjct: 199 RIEMTLSCAMALQNYPLDRQVCPVSIESYSYTRENIDFYWERHNPVLI-PSISLPQFTMP 257
Query: 66 KN-KTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
KT+ CS Y G+F CL + R GYY+ +IP+ LIVI+SWVSFW+ +A
Sbjct: 258 DTVKTSACSTEYGEVGDFACLLLELQFDRNTGYYIAQIFIPSILIVILSWVSFWVDIDAI 317
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV+LGV ++LT++TQ + ++++LP VSY+KA+D +M+ C
Sbjct: 318 PARVSLGVLTVLTMTTQSSGARSALPRVSYIKAIDVWMAVC 358
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 167 SSTSLTFNDILPE--DPKLYDKMRPPKKEGQ-PTIVYFHVTVMGLDSIDENSMTYAADIF 223
SS L+ +D++ + D YD + P E PT + + + + S+DE M ++ DI
Sbjct: 72 SSGELSRHDLIHQLIDESHYDPLIAPNYEDDFPTNISVQMLIKNIHSLDELHMDFSVDII 131
Query: 224 FAQTWKDHRLRLPENMTSEYRLLEVD--WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWL 281
F Q W D RL+ S R+LE+D ++ +W PDSFF K +T+PN + +
Sbjct: 132 FRQRWTDKRLKFNH---STVRILELDQKMIERIWVPDSFFPQEKRAEIHDVTVPNRLLHI 188
Query: 282 YKDKTILYMVKFVF-----MALMEYCL 303
Y++ T+ Y ++ MAL Y L
Sbjct: 189 YRNGTVFYSMRIEMTLSCAMALQNYPL 215
>gi|312091066|ref|XP_003146848.1| hypothetical protein LOAG_11278 [Loa loa]
Length = 312
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 103/161 (63%), Gaps = 1/161 (0%)
Query: 4 EYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQ 63
YR+++K C ++ I+P D Q C+L+ ES SH D++I +W + + + ++LP
Sbjct: 134 NYRMSVKAPCDLDLRIFPFDIQSCALRFESYSHNNDEVILRW-MDNAITWMKPVQLPDFD 192
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
LV + + + +Y G++ L+VIF KRR G+Y+ YIPT L +I+SW+SF ++P+A
Sbjct: 193 LVSYRIINETVLYPNGHWDQLQVIFTFKRRYGFYILQAYIPTYLTIIVSWISFCMEPKAL 252
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR T+GV+SLL L+ Q +LP VSY+KA+D +M C
Sbjct: 253 PARTTVGVSSLLALTFQFGNILKNLPRVSYIKAMDVWMLGC 293
>gi|393906638|gb|EFO17222.2| hypothetical protein LOAG_11278 [Loa loa]
Length = 371
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 104/163 (63%), Gaps = 5/163 (3%)
Query: 4 EYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD--EKIELPQ 61
YR+++K C ++ I+P D Q C+L+ ES SH D++I +W M A+ + ++LP
Sbjct: 134 NYRMSVKAPCDLDLRIFPFDIQSCALRFESYSHNNDEVILRW---MDNAITWMKPVQLPD 190
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
LV + + + +Y G++ L+VIF KRR G+Y+ YIPT L +I+SW+SF ++P+
Sbjct: 191 FDLVSYRIINETVLYPNGHWDQLQVIFTFKRRYGFYILQAYIPTYLTIIVSWISFCMEPK 250
Query: 122 AAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
A PAR T+GV+SLL L+ Q +LP VSY+KA+D +M C
Sbjct: 251 ALPARTTVGVSSLLALTFQFGNILKNLPRVSYIKAMDVWMLGC 293
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE-NMTSE 242
Y K+ P + + HV + +++E + + DI + Q W D L N
Sbjct: 29 YTKILPEIDDAVQVDIEIHV--QDVSALNEITADFNVDILYTQLWNDQSLSFTNYNPCKR 86
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTI 287
++ +L ++W P++ NAK N V LY++ TI
Sbjct: 87 NITMDSKFLSHIWTPNTCIINAKRTVIHASPTDNIMVILYENGTI 131
>gi|328713123|ref|XP_003244998.1| PREDICTED: hypothetical protein LOC100159973 [Acyrthosiphon pisum]
Length = 119
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/88 (76%), Positives = 73/88 (82%), Gaps = 3/88 (3%)
Query: 168 STSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQT 227
S L F DILPED K YDKMRPPK +G T V+FHVTVMGLDSIDEN+MTYAADIFFAQT
Sbjct: 31 SKCLEFRDILPEDAKQYDKMRPPKIDGTATKVHFHVTVMGLDSIDENAMTYAADIFFAQT 90
Query: 228 WKDHRLRLPENMTSEY---RLLEVDWLK 252
WKDHRLRLPENMTSEY RL+ +D +K
Sbjct: 91 WKDHRLRLPENMTSEYSCTRLVPIDVIK 118
>gi|312091273|ref|XP_003146921.1| glutamate-gated chloride channel alpha3A subunit [Loa loa]
Length = 388
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Query: 15 MNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQLVKNKTADC 72
M+ YP D Q C + + S ++TTDD+ ++W P+ E + LP +L T C
Sbjct: 1 MSLEYYPLDRQTCLIDLASYAYTTDDIKYEWKLTNPIQQKEGLRQSLPSFELQDVLTDYC 60
Query: 73 SQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVT 132
+ +TG ++CL +L+R YYL YIP+ ++VI+SWVSFW+ ++ PARVTLGVT
Sbjct: 61 TSKTNTGEYSCLRTKMILRREFSYYLVQLYIPSLMLVIVSWVSFWLDKDSVPARVTLGVT 120
Query: 133 SLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+LLT++TQ++ A LPPVSY KA+D ++ C
Sbjct: 121 TLLTMTTQNSGINAKLPPVSYTKAIDVWIGVC 152
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 52/65 (80%)
Query: 102 YIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
YIP ++V++SWVSFW+ +A PARV+LGVT+LLT++TQ + A LPPVSY+KAVD ++
Sbjct: 235 YIPCIMLVVVSWVSFWLDKDAVPARVSLGVTTLLTMTTQASGINAKLPPVSYIKAVDVWI 294
Query: 162 SACTV 166
AC +
Sbjct: 295 GACLI 299
>gi|344243736|gb|EGV99839.1| Gamma-aminobutyric acid receptor subunit beta-2 [Cricetulus
griseus]
Length = 338
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 106 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSI 165
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 166 VDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 225
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+ ++ C V
Sbjct: 226 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIYMYLMGCFV 267
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 218 YAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y ++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+
Sbjct: 34 YTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTV 88
Query: 275 PNHYVWLYKDKTILYMVKFVFMA 297
N + L+ D T+LY ++ A
Sbjct: 89 KNRMIRLHPDGTVLYGLRITTTA 111
>gi|344240470|gb|EGV96573.1| Gamma-aminobutyric acid receptor subunit beta-3 [Cricetulus
griseus]
Length = 231
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 102/153 (66%), Gaps = 1/153 (0%)
Query: 15 MNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQLVKNKTADCS 73
M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +V+++ +
Sbjct: 2 MDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRN 61
Query: 74 QVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTS 133
V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+ ARV LG+T+
Sbjct: 62 VVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITT 121
Query: 134 LLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
+LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 122 VLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 154
>gi|83779000|gb|ABC47324.1| GABA receptor [Tetranychus urticae]
Length = 585
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 99/161 (61%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT+ SC MN +P D Q+C++++ES ++ D+I+ W E + +D + LPQ +
Sbjct: 165 RLTVTASCPMNLQYFPMDRQKCNIEIESYGYSMTDIIYNWVDENAVKIDSNLMLPQFSIA 224
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ + +TGN++ L L R +GYY+ Y+P LIVI+SWVSFW+ A PA
Sbjct: 225 SIRQSWKYISLTTGNYSRLMCEIQLTRSMGYYMIQIYVPASLIVIISWVSFWLHRNATPA 284
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV LGV ++LT++T + + + LP +SY+K++D F+ C V
Sbjct: 285 RVHLGVITVLTMTTLMSSTNSQLPKISYVKSIDVFLGTCFV 325
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 19/147 (12%)
Query: 151 VSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDS 210
+ Y +++F T+S F+ I+ + PP K G V H+ + + S
Sbjct: 43 IEYFTNIESFFQVATISE----FDPIM---------VGPPVKVG----VTMHI--LTISS 83
Query: 211 IDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQ 270
+ E M + AD +F Q W+D RL L++ + +W PD+FF N K F
Sbjct: 84 VSEVQMDFTADFYFRQLWRDSRLSFKARHGISQILVDAEVADKIWVPDTFFANEKQAYFH 143
Query: 271 TMTIPNHYVWLYKDKTILYMVKFVFMA 297
T N ++ + D +L ++ A
Sbjct: 144 EATTKNTFLRISHDGQVLRSIRLTVTA 170
>gi|436874450|gb|JAA65056.1| GLC-2 [Oesophagostomum dentatum]
Length = 424
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 101/162 (62%), Gaps = 3/162 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI--ELPQLQ 63
R+++ SC M +YP D Q C + S +HT D++++WDP+ P+ + + +LP Q
Sbjct: 146 RISITSSCHMQLQLYPFDLQYCDFDLVSYAHTMKDIVYEWDPDTPVQLKPGVGSDLPNFQ 205
Query: 64 LVKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
L T D C+ +TG++ CL + +LKR+ YYL Y PT +IVI+SWVSFWI +
Sbjct: 206 LQNITTNDDCTSHTNTGSYACLRMKLILKRQFSYYLVQLYGPTTMIVIVSWVSFWIDMHS 265
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV LGVT+LLT++T A A LPPVSY+K VD ++ AC
Sbjct: 266 TAGRVALGVTTLLTMTTMQAAINAKLPPVSYVKVVDVWLGAC 307
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 175 DILPEDPKLYD-KMRPPKKE----GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
+IL E + YD ++RPP P IV ++ + L ID +M Y+ + F + W
Sbjct: 22 EILNELLRNYDMRVRPPPSNYSDPHGPVIVRVNIMIRMLSKIDVVNMEYSMQLTFREQWV 81
Query: 230 DHRLRLPE-NMTSEYRLLEVDWLK-NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTI 287
D RL + + R L V +K N+W PD+FF KA + N ++ ++ D +
Sbjct: 82 DSRLAYSQLGYRNAPRFLTVPHIKSNLWIPDTFFPTEKAAHRHLIDTDNMFLRIHPDGRV 141
Query: 288 LY 289
LY
Sbjct: 142 LY 143
>gi|113679289|ref|NP_001038841.1| gamma-aminobutyric acid (GABA) A receptor, rho 2a [Danio rerio]
gi|112418717|gb|AAI22283.1| Zgc:153417 [Danio rerio]
gi|182888974|gb|AAI64465.1| Zgc:153417 protein [Danio rerio]
Length = 371
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 104/158 (65%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ +C M+F +P D+Q CSL++ES ++T +DL+ W + + L++DEKI L Q +
Sbjct: 72 RVTVTAACNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLSIDEKISLSQFLI 131
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 132 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 191
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 192 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 229
>gi|30089004|gb|AAP13537.1| avermectin-sensitive chloride channel GluCl beta/cyan fluorescent
protein fusion [synthetic construct]
Length = 674
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 5/163 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI--ELPQLQ 63
R++L SC M +YP D Q C+ + S +HT +D++++WDP P+ + + +LP
Sbjct: 154 RISLTSSCPMRLQLYPLDYQSCNFDLVSFAHTMNDIMYEWDPSTPVQLKPGVGSDLPNF- 212
Query: 64 LVKNKT--ADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
++KN T ADC+ +TG++ CL + + KR+ YYL Y PT +IVI+SWVSFWI
Sbjct: 213 ILKNYTTNADCTSHTNTGSYGCLRMQLLFKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLH 272
Query: 122 AAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ RV LGVT+LLT++T + A LPPVSY+K VD ++ AC
Sbjct: 273 STAGRVALGVTTLLTMTTMQSAINAKLPPVSYVKVVDVWLGAC 315
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 182 KLYD-KMRPP----KKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
K YD ++RPP EG V ++ + L ID +M Y+ + F + W D RL
Sbjct: 38 KNYDMRVRPPPANSSTEGAVN-VRVNIMIRMLSKIDVVNMEYSIQLTFREQWIDPRLAY- 95
Query: 237 ENMT--SEYRLLEVDWLK-NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
EN+ + L V +K ++W PD+FF KA + + N ++ +Y D ILY
Sbjct: 96 ENLGFYNPPAFLTVPHVKKSLWIPDTFFPTEKAAHRHLIDMENMFLRIYPDGKILY 151
>gi|226483409|emb|CAX74005.1| glycine receptor, alpha 1 [Schistosoma japonicum]
Length = 454
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 13/175 (7%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQL--- 62
++T++++C M +P DTQEC + + S +T + + F W P+ + E +++ +
Sbjct: 156 KITMRMACQMELRTFPMDTQECDMNIGSYGYTLEQVSFVWRNVSPVTLPENLQISEFDPP 215
Query: 63 QLVKNKTADCSQVYST--GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
++V+ DC+ YST G +TCL F L+R+LGY+L TYIP LI+++SW++FW+
Sbjct: 216 EVVR--AYDCTSGYSTSTGQYTCLNATFTLQRQLGYWLASTYIPNILIMVVSWLNFWVSL 273
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFND 175
EA PARV L + +LL + TQ +SLP VSY+KA+D +M AC +TFN
Sbjct: 274 EAIPARVNLSLLTLLGVITQSTSYASSLPRVSYIKAIDIWMIAC------ITFNS 322
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 160 FMSACTVSSTSLTFNDILPEDPKLYDK-MRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY 218
+ S C V TS ++I+ Y +RP + T+V +++V + S+D +M Y
Sbjct: 20 YESKCAVLDTSSIRDEIVETLFANYQSHVRPGELIRNTTVVTVYISVSAITSVDVRNMEY 79
Query: 219 AADIFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
D+ Q W D RL ++ + ++ + + +W PD FF+N K MT
Sbjct: 80 TIDMLLRQAWYDPRLAWDKIEKFRHYTKNIVSPVFKEKIWLPDLFFRNGKEGRLHKMTCE 139
Query: 276 NHYVWLYKDKTILYMVKF 293
N + + + ILY K
Sbjct: 140 NLLIRIQPNGEILYSQKI 157
>gi|313235822|emb|CBY19806.1| unnamed protein product [Oikopleura dioica]
Length = 436
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 109/197 (55%), Gaps = 39/197 (19%)
Query: 4 EYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD--EKIELPQ 61
E RL+ LSC M F +P D Q C++++ES ++ T D+ F WD P V+ IELPQ
Sbjct: 170 EMRLSATLSCHMRFEHFPMDVQVCAIEIESFAYDTADVNFDWD-STPGGVELARSIELPQ 228
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYL--------FHTYIPTCLIVIMSW 113
+L + C GNFTC+E F+L R++GYYL F Y+PT LIV++SW
Sbjct: 229 FKLQGHVLGKCES--PRGNFTCIEGKFILSRQMGYYLIQFPPTLLFLAYVPTTLIVMLSW 286
Query: 114 VSFWIKPEAAPARVTLGVTSLLTLSTQHAK--------------------------SQAS 147
+SFWI A PARV+LG+T++LT+++Q + +A+
Sbjct: 287 ISFWISINATPARVSLGITTVLTITSQRSALTARMLRNREFFLQRFILSNKHLISLKKAA 346
Query: 148 LPPVSYLKAVDAFMSAC 164
LP VSY+ A+D +MS C
Sbjct: 347 LPMVSYVMAIDIWMSLC 363
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 174 NDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL 233
++ L P+ DK P ++ P V ++ + DSI E +M + W+D R+
Sbjct: 48 SETLQRSPRKMDKRIRPFEDIAPLNVSINLFISSFDSIAETTMDFGLTFIMRLRWQDPRM 107
Query: 234 RLP----ENMTSEYRLLEVD--WLKNMWRPDSFFKNAKAVTFQTMTIPN 276
P E + +L +D +L +W PD FF N K+ +T N
Sbjct: 108 MFPDITNEKTYNNRTILTMDLKFLDELWVPDVFFANEKSANVHQITSDN 156
>gi|313213443|emb|CBY37252.1| unnamed protein product [Oikopleura dioica]
gi|313222162|emb|CBY39152.1| unnamed protein product [Oikopleura dioica]
Length = 436
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 109/197 (55%), Gaps = 39/197 (19%)
Query: 4 EYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD--EKIELPQ 61
E RL+ LSC M F +P D Q C++++ES ++ T D+ F WD P V+ IELPQ
Sbjct: 170 EMRLSATLSCHMRFEHFPMDVQVCAIEIESFAYDTADVNFDWD-STPGGVELARSIELPQ 228
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYL--------FHTYIPTCLIVIMSW 113
+L + C GNFTC+E F+L R++GYYL F Y+PT LIV++SW
Sbjct: 229 FKLQGHVLGKCES--PRGNFTCIEGKFILSRQMGYYLIQFPPTLLFLAYVPTTLIVMLSW 286
Query: 114 VSFWIKPEAAPARVTLGVTSLLTLSTQHAK--------------------------SQAS 147
+SFWI A PARV+LG+T++LT+++Q + +A+
Sbjct: 287 ISFWISINATPARVSLGITTVLTITSQRSALTARMLRNREFFLQRFILSNKHLISLKKAA 346
Query: 148 LPPVSYLKAVDAFMSAC 164
LP VSY+ A+D +MS C
Sbjct: 347 LPMVSYVMAIDIWMSLC 363
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 174 NDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL 233
++ L P+ DK P ++ P V ++ + DSI E +M + W+D R+
Sbjct: 48 SETLQRSPRKMDKRIRPFEDIAPLNVSINLFISSFDSIAETTMDFGLTFIMRLRWQDPRM 107
Query: 234 RLP----ENMTSEYRLLEVD--WLKNMWRPDSFFKNAKAVTFQTMTIPN 276
P E + +L +D +L +W PD FF N K+ +T N
Sbjct: 108 MFPDITNEKTYNNRTILTMDLKFLDELWVPDVFFANEKSANVHQITSDN 156
>gi|324508831|gb|ADY43726.1| Glutamate-gated chloride channel [Ascaris suum]
Length = 249
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 95/152 (62%), Gaps = 2/152 (1%)
Query: 15 MNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQLVKNKTADC 72
M+ YP D Q C + + S ++TTDD+ ++W P+ E + LP +L T C
Sbjct: 1 MSLEYYPLDRQTCLIDLASYAYTTDDIKYEWKLTNPIQQKEGLRQSLPSFELQDVLTDYC 60
Query: 73 SQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVT 132
+ +TG ++CL +L+R YYL YIP+ ++VI+SWVSFW+ ++ PARVTLGVT
Sbjct: 61 TSKTNTGEYSCLRTKMILRREFSYYLLQLYIPSFMLVIVSWVSFWLDKDSVPARVTLGVT 120
Query: 133 SLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+LLT++TQ + A LPPVSY KA+D ++ C
Sbjct: 121 TLLTMTTQSSGINAKLPPVSYTKAIDVWIGVC 152
>gi|308458826|ref|XP_003091744.1| CRE-GLC-2 protein [Caenorhabditis remanei]
gi|308255107|gb|EFO99059.1| CRE-GLC-2 protein [Caenorhabditis remanei]
Length = 479
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI--ELPQLQ 63
R++L SC M +YP D Q C+ + S +HT +D++++WDP+ P+ + + +LP
Sbjct: 173 RISLTSSCPMRLQLYPLDYQSCNFDLVSYAHTMNDIMYEWDPDKPVQLKPGVGLDLPNFV 232
Query: 64 LVKNKT-ADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
L T ADC+ +TG++ CL + +LKR+ YYL Y PT +IVI+SWVSFWI +
Sbjct: 233 LQNITTNADCTSHTNTGSYGCLRMNLLLKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLHS 292
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV LGVT+LLT++T + A LPPVSY+K VD ++ AC
Sbjct: 293 TAGRVALGVTTLLTMTTMQSAINAKLPPVSYVKVVDVWLGAC 334
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 175 DILPEDPKLYD-KMRPP----KKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
+IL K YD ++RPP EG V ++ + L ID +M Y+ + F + W
Sbjct: 50 EILNTLLKNYDMRVRPPPANSSTEGAVN-VRVNIMIRMLSKIDVVNMEYSIQLTFREQWI 108
Query: 230 DHRLRLPE-NMTSEYRLLEVDWLK-NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTI 287
D RL + L V +K ++W PD+FF KA + + N ++ +Y + T+
Sbjct: 109 DPRLAYEHLGFYNPPAYLTVPHVKKSLWIPDTFFPTEKAAHRHLIDMENMFLRIYLNGTV 168
Query: 288 LY 289
LY
Sbjct: 169 LY 170
>gi|313849050|dbj|BAJ41377.1| GABA receptor [Tetranychus urticae]
Length = 827
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 99/161 (61%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT+ SC MN +P D Q+C++++ES ++ D+I+ W E + +D + LPQ +
Sbjct: 183 RLTVTASCPMNLQYFPMDRQKCNIEIESYGYSMTDIIYNWVDENAVKIDSNLMLPQFSIA 242
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ + +TGN++ L L R +GYY+ Y+P LIVI+SWVSFW+ A PA
Sbjct: 243 SIRQSWKYISLTTGNYSRLMCEIQLTRSMGYYMIQIYVPASLIVIISWVSFWLHRNATPA 302
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV LGV ++LT++T + + + LP +SY+K++D F+ C V
Sbjct: 303 RVHLGVITVLTMTTLMSSTNSQLPKISYVKSIDVFLGTCFV 343
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + ++ + S+ E M + AD +F Q W+D RL
Sbjct: 75 YDKRVRPNYGGPPVKVGVTMHILTISSVSEVQMDFTADFYFRQLWRDSRLSFKARHGISQ 134
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
L++ + +W PD+FF N K F T N ++ + D +L ++ A
Sbjct: 135 ILVDAEVADKIWVPDTFFANEKQAYFHEATTKNTFLRISHDGQVLRSIRLTVTA 188
>gi|221040004|dbj|BAH11765.1| unnamed protein product [Homo sapiens]
Length = 314
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
Query: 15 MNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQLVKNKTADCS 73
M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +V K
Sbjct: 2 MDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSIVDYKLITKK 61
Query: 74 QVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTS 133
V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+ ARV LG+T+
Sbjct: 62 VVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITT 121
Query: 134 LLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
+LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 122 VLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 154
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 56/160 (35%), Gaps = 62/160 (38%)
Query: 293 FVFMALMEYCLVN-IVLGD-----------------------------------SDLPKP 316
FVFMAL+EY LVN I G S L
Sbjct: 155 FVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKMRLDVNKMDPHENILLSTLEIK 214
Query: 317 PEPAKQDKIFELAAKENARLL----------TGQPMIPPNHQQAQRNLAQ---RARTRA- 362
E A + + L + L G P +R++AQ R R RA
Sbjct: 215 NEMATSEAVMGLGDPRSTMLAYDASSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRAS 274
Query: 363 -----------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
+N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 275 QLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 314
>gi|382928891|gb|AFG29911.1| GABA-gated chloride channel 1 [Tetranychus urticae]
Length = 812
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 99/161 (61%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT+ SC MN +P D Q+C++++ES ++ D+I+ W E + +D + LPQ +
Sbjct: 169 RLTVTASCPMNLQYFPMDRQKCNIEIESYGYSMTDIIYNWVDENAVKIDSNLMLPQFSIA 228
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ + +TGN++ L L R +GYY+ Y+P LIVI+SWVSFW+ A PA
Sbjct: 229 SIRQSWKYISLTTGNYSRLMCEIQLTRSMGYYMIQIYVPASLIVIISWVSFWLHRNATPA 288
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV LGV ++LT++T + + + LP +SY+K++D F+ C V
Sbjct: 289 RVHLGVITVLTMTTLMSSTNSQLPKISYVKSIDVFLGTCFV 329
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + ++ + S+ E M + AD +F Q W+D RL
Sbjct: 61 YDKRVRPNYGGPPVKVGVTMHILTISSVSEVQMDFTADFYFRQLWRDSRLSFKARHGISQ 120
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
L++ + +W PD+FF N K F T N ++ + D +L ++ A
Sbjct: 121 ILVDAEVADKIWVPDTFFANEKQAYFHEATTKNTFLRISHDGQVLRSIRLTVTA 174
>gi|391330514|ref|XP_003739705.1| PREDICTED: glycine receptor subunit alpha-3-like [Metaseiulus
occidentalis]
Length = 439
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 106/165 (64%), Gaps = 4/165 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL L+ SC ++ YP D QEC +++ + + T D++ W+ PL + I++ +L
Sbjct: 183 RLKLRFSCMLDLTSYPLDRQECYIELATFARTNTDVMLHWNGTTPLTFNRGIKMANFELE 242
Query: 66 KNKTAD-CSQV---YSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
K + + C + + +CL V LKR +G++L +Y+P+ LIV++SWVSFW+ +
Sbjct: 243 KAEHLNFCPRTNIHHLDTERSCLSVRLSLKRAIGHHLVQSYLPSILIVVISWVSFWLDVD 302
Query: 122 AAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A PARVTLGVT+LLT+S + + Q++ PV+Y+KA+D +M+ACT+
Sbjct: 303 AIPARVTLGVTTLLTISAESSDKQSNQAPVAYVKALDIWMAACTM 347
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Query: 193 EGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL------RLPENMTSEYRLL 246
G T V + + +++ ++M Y +++ ++W D R N +S L
Sbjct: 78 RGGTTHVNIELLIRAFGTVNADTMDYDVELYLRESWDDIRFTSLQFGAGTNNDSSRLDLN 137
Query: 247 EVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+ +K +W+PD +F NAK F +PN + + + +LY ++
Sbjct: 138 DATIIKAIWKPDIYFPNAKEGKFPFCHVPNVLLRIEANGRVLYSLRL 184
>gi|71984488|ref|NP_498532.3| Protein LGC-38 [Caenorhabditis elegans]
gi|373218821|emb|CCD63396.1| Protein LGC-38 [Caenorhabditis elegans]
Length = 459
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 103/159 (64%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT+ +C M+ +P D QEC+L++ES ++T D+I+ W + +DE + L +
Sbjct: 169 RLTVTANCPMSLHTFPLDRQECALEVESYGYSTKDIIYHWHGTNAVTIDENVHLAHFTIG 228
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
++K + + STGN++ L F+ KR +G+YL Y P+ LIV++SWVSFW+ EA A
Sbjct: 229 EHKHIERTISLSTGNYSRLTAYFLFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQA 288
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV +GVT++LT++T + ASLP VSY+K++D F+ C
Sbjct: 289 RVAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDVFLGVC 327
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
+D+ P G P V V + ++ E SM Y D++ Q WKD RL E+ +
Sbjct: 62 HDRRIRPNYGGPPIEVNITAHVTTISAVSEVSMDYTLDLYLRQIWKDPRLAW-ESDVEDS 120
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +D +K +W PD+FF N K F T N ++ + +L ++ A
Sbjct: 121 LTIGIDMVKTIWTPDTFFPNEKKSFFHEATSHNSFLRIDNHGNVLRSIRLTVTA 174
>gi|226483407|emb|CAX74004.1| glycine receptor, alpha 1 [Schistosoma japonicum]
Length = 511
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 108/175 (61%), Gaps = 13/175 (7%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQL--- 62
++T++++C M +P DTQEC + + S +T + + F W P+ + E +++ +
Sbjct: 156 KITMRMACQMELRTFPMDTQECDMNIGSYGYTLEQVSFVWRNVSPVTLPENLQISEFDPP 215
Query: 63 QLVKNKTADCSQVYST--GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
++V+ DC+ YST G +TCL F L+R+LGY+L TYIP LI+++SW++FW+
Sbjct: 216 EVVR--AYDCTSGYSTSTGQYTCLNATFTLQRQLGYWLASTYIPNILIMVVSWLNFWVSL 273
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFND 175
EA PARV L + +LL + TQ +SLP VSY+KA+D +M AC +TFN
Sbjct: 274 EAIPARVNLSLLTLLGVITQSTSYASSLPRVSYIKAIDIWMIAC------ITFNS 322
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 160 FMSACTVSSTSLTFNDILPEDPKLYDK-MRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY 218
+ S C V TS ++I+ Y +RP + T+V +++V + S+D +M Y
Sbjct: 20 YESKCAVLDTSSIRDEIVETLFANYQSHVRPGELIRNTTVVTVYISVSAITSVDVRNMEY 79
Query: 219 AADIFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
D+ Q W D RL ++ + ++ + + +W PD FF+N K MT
Sbjct: 80 TIDMLLRQAWYDPRLAWDKIEKFRHYTKNIVSPVFKEKIWLPDLFFRNGKEGRLHKMTCE 139
Query: 276 NHYVWLYKDKTILYMVKF 293
N + + + ILY K
Sbjct: 140 NLLIRIQPNGEILYSQKI 157
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 315 KPPEPAKQDKIFELAAKENA--RLLTGQ--PMIPPNHQQAQRNLAQRARTRAINIDRFSR 370
K E A + +EL A ++A L T Q ++PP Q + A ++ ID +SR
Sbjct: 432 KKSERASKGTFYELVANDSALTALDTTQKDALLPPCEPQRIKKPASMSK-----IDSYSR 486
Query: 371 VFFPVLFAILNCTYWIMF 388
FP F + NC YW+ +
Sbjct: 487 FVFPACFLLYNCFYWLYY 504
>gi|38491403|gb|AAR21856.1| GluCl beta [Cooperia oncophora]
Length = 432
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 99/162 (61%), Gaps = 3/162 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI--ELPQLQ 63
R+++ SC M +YP D Q C + S +HT D+++QWDP P+ + + +LP Q
Sbjct: 157 RISITSSCHMQLQLYPLDLQFCDFDLVSYAHTMKDIVYQWDPTAPVQLKPGVGSDLPNFQ 216
Query: 64 LVKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
L T D C+ +TG++ CL + LKR+ YYL Y PT +IVI+SWVSFWI +
Sbjct: 217 LTNITTNDDCTSHTNTGSYACLRMQLTLKRQFSYYLVQLYGPTTMIVIVSWVSFWIDMHS 276
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV LGVT+LLT++T A A LPPVSY+K VD ++ AC
Sbjct: 277 TAGRVALGVTTLLTMTTMQAAINAKLPPVSYVKVVDVWLGAC 318
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 167 SSTSLTFNDILPEDPKLYD-KMRPP----KKEGQPTIVYFHVTVMGLDSIDENSMTYAAD 221
SS +IL E YD ++RPP P V ++ + L ID +M Y+
Sbjct: 25 SSGGTQEQEILNELLSNYDMRVRPPPTNYSDPTGPVTVRVNIMIRMLSKIDVVNMEYSMQ 84
Query: 222 IFFAQTWKDHRLRLPE-NMTSEYRLLEVDWLK-NMWRPDSFFKNAKAVTFQTMTIPNHYV 279
+ F + W D RL + + L V +K N+W PD+FF KA + N ++
Sbjct: 85 LTFREQWLDSRLAYARLGYHNPPKFLTVPHIKSNLWIPDTFFPTEKAAHRHLIDTDNMFL 144
Query: 280 WLYKDKTILY 289
++ D +LY
Sbjct: 145 RIHPDGKVLY 154
>gi|341888064|gb|EGT43999.1| hypothetical protein CAEBREN_06566 [Caenorhabditis brenneri]
Length = 437
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 102/162 (62%), Gaps = 3/162 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI--ELPQLQ 63
R++L SC M +YP D Q C+ + S +HT +D++++WDPE P+ + +LP
Sbjct: 157 RISLISSCPMRLQLYPLDYQSCNFDLVSYAHTMNDIMYEWDPEKPIQQKPGVGLDLPNFV 216
Query: 64 LVKNKT-ADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
L T ADC+ +TG++ CL + +LKR+ YYL Y PT +IVI+SWVSFWI +
Sbjct: 217 LENITTNADCTSHTNTGSYGCLRMNLLLKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLHS 276
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV LGVT+LLT++T + A LPPVSY+K VD ++ AC
Sbjct: 277 TAGRVALGVTTLLTMTTMQSAINAKLPPVSYVKVVDVWLGAC 318
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 182 KLYD-KMRPP----KKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
K YD ++RPP EG P V ++ + L ID +M Y+ + F + W D RL
Sbjct: 41 KNYDMRVRPPPANASTEG-PVNVRVNIMIRMLSKIDVVNMEYSIQLTFREQWIDSRLAYE 99
Query: 237 E-NMTSEYRLLEVDWLK-NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFV 294
+ L V +K ++W PD+FF KA + N ++ ++ D +LY +
Sbjct: 100 HLGFYNPPAFLTVPHVKKSLWIPDTFFPTEKAAHRHLIDTENMFLRIHPDGKVLYSSR-- 157
Query: 295 FMALMEYC 302
++L+ C
Sbjct: 158 -ISLISSC 164
>gi|405951987|gb|EKC19849.1| Glycine receptor subunit alpha-2 [Crassostrea gigas]
Length = 461
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 105/170 (61%), Gaps = 9/170 (5%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW---DPEMPLAVD--EKIELP 60
RL++ L+C M +P D QEC++ +ES +++ ++++F W DP + + D ++ E P
Sbjct: 201 RLSMTLTCTMKLHNFPLDDQECTIFLESYAYSIENVVFHWHKRDPVILMNADKNDEQETP 260
Query: 61 QLQLVKN-KTADCSQVYSTG---NFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSF 116
Q K T C + S G F CL+ +R LGYYL ++P+ LIVI+SW+SF
Sbjct: 261 QFYFYKQIHTGSCEKTTSFGPNNEFACLQAKLFFRRNLGYYLAQIFVPSILIVILSWISF 320
Query: 117 WIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
WI +A PAR++LGV +LT++TQ + + SLP VSY+KA+D +MS V
Sbjct: 321 WIHVDAVPARISLGVLCVLTMTTQSSGIRNSLPRVSYIKAIDVWMSMGLV 370
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 74/130 (56%), Gaps = 4/130 (3%)
Query: 185 DKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYR 244
+++ P +E + T V +++++ +DSI+E SM ++ ++F Q W D RL + S++
Sbjct: 94 NRIAPNYEEDRATNVTINLSIISIDSINEISMDFSLNLFLYQQWVDPRLNYTK--YSDFP 151
Query: 245 LLEVD--WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYC 302
LE+D ++N+W PD++F N K TF T+T+ N + +Y++ T+ Y ++
Sbjct: 152 NLELDQKMIENVWVPDTYFPNEKQATFHTVTVNNKLLHIYQNGTVFYSIRLSMTLTCTMK 211
Query: 303 LVNIVLGDSD 312
L N L D +
Sbjct: 212 LHNFPLDDQE 221
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 19/98 (19%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARLLTGQPMIPPNHQQAQR 352
FVF AL+EY +N+ + + + K + PM+P N +R
Sbjct: 371 FVFAALLEYAYINV-------------QTRRHVKYTSMKNQPSMREKGPMLPSNGVPDRR 417
Query: 353 --NLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+ QRAR +D+ +RV FPV F + N +W +
Sbjct: 418 EIDFLQRAR----QVDKVARVGFPVSFLLFNVVFWTYY 451
>gi|148705865|gb|EDL37812.1| gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1, isoform
CRA_a [Mus musculus]
Length = 473
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 102/162 (62%), Gaps = 2/162 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++E+ +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIEN-GYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 314
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
>gi|165935826|gb|ABY75185.1| GABA-gated chloride channel receptor [Haemonchus contortus]
Length = 456
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 100/159 (62%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT+ +C MN +P D QEC+L++ES ++T D+I+ W + +DE + L +
Sbjct: 172 RLTVTANCPMNLHTFPLDIQECALEIESYGYSTRDIIYHWHDANAVTIDENVHLAHFSIG 231
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ + + STGN++ L F KR LG+YL Y P+ LIV++SWVSFW+ EA A
Sbjct: 232 DHYHIERTISLSTGNYSRLSAYFTFKRNLGFYLIQIYFPSSLIVVISWVSFWLNREAVQA 291
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV +GVT++LT++T + ASLP VSY+K++D F+ C
Sbjct: 292 RVAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDIFLGMC 330
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
+D+ P G P V + + +I E SM Y D++ Q WKD RL ++ S
Sbjct: 65 HDRRIRPNYGGPPIEVNITAHITTISAITEVSMDYTLDLYLRQIWKDPRLAWESDVQSSL 124
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +D +K +W PD+FF N K F T N ++ + +L ++ A
Sbjct: 125 -TIGIDMVKTIWTPDTFFPNEKKSFFHEATSHNSFLRIDSHGNVLRSIRLTVTA 177
>gi|28883189|gb|AAO34107.1| avermectin-sensitive glutamate-gated chloride channel GluCl beta
[synthetic construct]
Length = 434
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 5/163 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI--ELPQLQ 63
R++L SC M +YP D Q C+ + S +HT +D++++WDP P+ + + +LP
Sbjct: 154 RISLTSSCPMRLQLYPLDYQSCNFDLVSYAHTMNDIMYEWDPSTPVQLKPGVGSDLPNF- 212
Query: 64 LVKNKT--ADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
++KN T ADC+ +TG++ CL + + KR+ YYL Y PT +IVI+SWVSFWI
Sbjct: 213 ILKNYTTNADCTSHTNTGSYGCLRMQLLFKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLH 272
Query: 122 AAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ RV LGVT+LLT++T + A LPPVSY+K VD ++ AC
Sbjct: 273 STAGRVALGVTTLLTMTTMQSAINAKLPPVSYVKVVDVWLGAC 315
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 182 KLYD-KMRPP----KKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
K YD ++RPP EG V ++ + L ID +M Y+ + F + W D RL
Sbjct: 38 KNYDMRVRPPPANSSTEGAVN-VRVNIMIRMLSKIDVVNMEYSIQLTFREQWIDPRLAY- 95
Query: 237 ENMT--SEYRLLEVDWLK-NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
EN+ + L V +K ++W PD+FF KA + + N ++ +Y D ILY
Sbjct: 96 ENLGFYNPPAFLTVPHVKKSLWIPDTFFPTEKAAHRHLIDMENMFLRIYPDGKILY 151
>gi|17507873|ref|NP_491470.1| Protein GLC-2 [Caenorhabditis elegans]
gi|74962112|sp|Q17328.1|GLUCB_CAEEL RecName: Full=Glutamate-gated chloride channel subunit beta;
Short=Glu-Cl subunit beta; AltName:
Full=Avermectin-sensitive glutamate-gated chloride
channel subunit; Flags: Precursor
gi|559561|gb|AAA50786.1| avermectin-sensitive glutamate-gated chloride channel GluCl beta
[Caenorhabditis elegans]
gi|351020443|emb|CCD62432.1| Protein GLC-2 [Caenorhabditis elegans]
gi|1091781|prf||2021414B Glu-gated Cl channel:ISOTYPE=beta
Length = 434
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 5/163 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI--ELPQLQ 63
R++L SC M +YP D Q C+ + S +HT +D++++WDP P+ + + +LP
Sbjct: 154 RISLTSSCPMRLQLYPLDYQSCNFDLVSYAHTMNDIMYEWDPSTPVQLKPGVGSDLPNF- 212
Query: 64 LVKNKT--ADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
++KN T ADC+ +TG++ CL + + KR+ YYL Y PT +IVI+SWVSFWI
Sbjct: 213 ILKNYTTNADCTSHTNTGSYGCLRMQLLFKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLH 272
Query: 122 AAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ RV LGVT+LLT++T + A LPPVSY+K VD ++ AC
Sbjct: 273 STAGRVALGVTTLLTMTTMQSAINAKLPPVSYVKVVDVWLGAC 315
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 182 KLYD-KMRPP----KKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
K YD ++RPP EG V ++ + L ID +M Y+ + F + W D RL
Sbjct: 38 KNYDMRVRPPPANSSTEGAVN-VRVNIMIRMLSKIDVVNMEYSIQLTFREQWIDPRLAY- 95
Query: 237 ENMT--SEYRLLEVDWLK-NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
EN+ + L V +K ++W PD+FF KA + + N ++ +Y D ILY
Sbjct: 96 ENLGFYNPPAFLTVPHVKKSLWIPDTFFPTEKAAHRHLIDMENMFLRIYPDGKILY 151
>gi|25151135|ref|NP_508428.2| Protein LGC-40 [Caenorhabditis elegans]
gi|373219979|emb|CCD71459.1| Protein LGC-40 [Caenorhabditis elegans]
Length = 494
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 120/197 (60%), Gaps = 6/197 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPL-AVDEK--IELPQL 62
R+++ SC M+ YP D+QEC+L++ S ++ L W + + A+D I +P +
Sbjct: 151 RISIVSSCNMDLWKYPLDSQECALRILSYAYPMTVLRLLWSEKEDVPAIDRNPDITMPDM 210
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
L +T C+ Y+TG ++C+ IF ++R + +++ TY+PT LIV++SW +FW++ ++
Sbjct: 211 SLKHIRTGYCNGTYATGEWSCMTAIFYVEREMMHHVMQTYVPTALIVVISWFNFWLEIDS 270
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPK 182
APARV+L +T+LLT+STQ + +LP VSY+KA+D +M +C + + K
Sbjct: 271 APARVSLSITTLLTISTQANAVKLALPEVSYMKAIDVWMGSCMAFVFGVMIEFTICHYAK 330
Query: 183 LYDKMRPPKKEGQPTIV 199
+ +R +GQP+++
Sbjct: 331 NLEMLR---GDGQPSLI 344
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 179 EDPKLYDKMRPPKK-EGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE 237
++ LY++ P + +G PT V + + G+ S +M Y D++F + W DHRL
Sbjct: 39 KNETLYNRFATPTQYDGVPTNVTLSMFIEGMSSFSAQTMDYHLDVYFQEEWYDHRL--AH 96
Query: 238 NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
N ++ + ++ K MW PD +F NA++ FQ +T N VW+Y + + Y
Sbjct: 97 NASAPILVRDLTVFKMMWHPDVYFANARSAAFQDITDDNFLVWVYPNGRVWY 148
>gi|308460969|ref|XP_003092782.1| CRE-LGC-40 protein [Caenorhabditis remanei]
gi|308252493|gb|EFO96445.1| CRE-LGC-40 protein [Caenorhabditis remanei]
Length = 489
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 120/197 (60%), Gaps = 6/197 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPL-AVDEK--IELPQL 62
R+++ SC M+ YP D+QEC+L++ S ++ L W + + A+D I +P +
Sbjct: 146 RISIVSSCNMDLWKYPLDSQECALRILSYAYPMTVLRLLWSEKEDVPAIDRNPDITMPDM 205
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
L +T C+ Y+TG ++C+ IF ++R + +++ TY+PT LIV++SW +FW++ ++
Sbjct: 206 SLKHIRTGYCNGTYATGEWSCMTAIFYVEREMMHHVMQTYVPTALIVVISWFNFWLEIDS 265
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPK 182
APARV+L +T+LLT+STQ + +LP VSY+KA+D +M +C + + K
Sbjct: 266 APARVSLSITTLLTISTQANAVKLALPEVSYMKAIDVWMGSCMAFVFGVMIEFTICHYAK 325
Query: 183 LYDKMRPPKKEGQPTIV 199
+ +R +GQP+++
Sbjct: 326 NLEMLR---GDGQPSLI 339
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 179 EDPKLYDKMRPPKK-EGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE 237
++ LY+K P + + PT V + + G+ S +M Y D++F + W DHRL
Sbjct: 34 KNETLYNKFATPTQYDDVPTNVTLSMFIEGMSSFSAQTMDYHLDVYFQEEWYDHRL--AH 91
Query: 238 NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
N ++ + +++ K MW PD +F NA++ FQ +T N VW+Y + + Y
Sbjct: 92 NASAPILVRDLEVFKMMWHPDVYFANARSAAFQDITDDNFLVWVYPNGRVWY 143
>gi|341888315|gb|EGT44250.1| hypothetical protein CAEBREN_11613 [Caenorhabditis brenneri]
Length = 416
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 113/210 (53%), Gaps = 10/210 (4%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C ++ YP D Q C +++ S +H +++ W P P+ + +I+LP+ +
Sbjct: 104 RVTLNLACNLDLKDYPLDYQTCYIKVISYAHVKNEMNVTWFPNDPIRFNPEIDLPEFHIR 163
Query: 66 KNKTADCSQVY---------STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSF 116
C+ V+ G F+CL + LKR +G++L +YIPT LIV +SWVSF
Sbjct: 164 ALDKDYCNGVFLYTLTHNSSRVGEFSCLLGMLKLKRAIGFHLVQSYIPTALIVAISWVSF 223
Query: 117 WIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDI 176
WI A PARV+L T+LLTLSTQ + +LP VSY KA+D F + S + N +
Sbjct: 224 WIDRRAVPARVSLSFTTLLTLSTQGNGIRYALPAVSYAKAIDYFYGGKNWKTRS-SENSV 282
Query: 177 LPEDPKLYDKMRPPKKEGQPTIVYFHVTVM 206
L + + D PK P + F V+
Sbjct: 283 LSMERSIEDPSEKPKINNFPVCMLFIFGVL 312
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 192 KEGQPTI---VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEV 248
+ G P + V+F V L + MTY D++ +W+D +R N + + +
Sbjct: 3 RNGNPKVPLQVHFGFYVESLGNFRATEMTYDMDMYLYMSWQDDTMR--HNGSEHVLVNDK 60
Query: 249 DWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
D L +W PD +F NA+ F +T+ N +++ T+ Y +
Sbjct: 61 DILDKIWLPDLYFANARTAYFHKVTVHNFNMFISPQGTVSYGTR 104
>gi|256682097|gb|ACV07675.1| mutant GABA gated chloride channel [Rhipicephalus microplus]
Length = 537
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 103/162 (63%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
RLT+ SC M+ +P D Q C++++ES +T D+ ++W D + + + +++ELPQ ++
Sbjct: 163 RLTVTASCPMDLRYFPMDRQACTIEIESFGYTMKDIRYRWSDGDTSVRIAKEVELPQFKV 222
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ + +TGN++ L R +GYYL YIP LIV++SWVSFW+ A+P
Sbjct: 223 LGHVQKAKEVALTTGNYSRLVCEIRFARSMGYYLIQIYIPAGLIVVISWVSFWLHRNASP 282
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGV ++LT++T + + A+LP +SY+K++D ++ C V
Sbjct: 283 ARVALGVLTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 324
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 55/116 (47%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTS 241
+ YD+ P G P V + ++ + ++ E M + +D +F Q+W+D RL ++
Sbjct: 53 RGYDRRVRPNYGGVPVEVGVTMQIISISTVSEVQMDFTSDFYFRQSWRDERLSFQKSPDL 112
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
E + + + +W PD+FF N K+ F T PN ++ + + ++ A
Sbjct: 113 ESMTVGAEVAERIWVPDTFFANEKSAYFHAATTPNTFLRIGSGGEVFRSIRLTVTA 168
>gi|268562158|ref|XP_002646618.1| C. briggsae CBR-GLC-2 protein [Caenorhabditis briggsae]
Length = 425
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 101/162 (62%), Gaps = 3/162 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI--ELPQLQ 63
R++L SC M +YP D Q C+ M S +HT +D++++WDP P+ V + +LP
Sbjct: 145 RISLTSSCPMRLQLYPLDYQSCNFDMVSYAHTMNDIMYEWDPVKPVQVKPGVGSDLPNFV 204
Query: 64 LVKNKT-ADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
L T DC+ +TG++ CL + +LKR+ YYL Y PT +IVI+SWVSFWI +
Sbjct: 205 LENITTNTDCTSHTNTGSYGCLRMNLLLKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLHS 264
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV LGVT+LLT++T + A LPPVSY+K VD ++ AC
Sbjct: 265 TAGRVALGVTTLLTMTTMQSAINAKLPPVSYVKVVDVWLGAC 306
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 182 KLYD-KMRPP----KKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
K YD ++RPP EG V ++ + L ID +M Y+ + F + W D RL
Sbjct: 29 KNYDMRVRPPPVNTSTEGAVN-VRVNIMIRMLSKIDVVNMEYSIQLTFREEWTDPRLAYE 87
Query: 237 E-NMTSEYRLLEVDWLK-NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
+ L V +K ++W PD+FF KA + + N ++ ++ D +LY
Sbjct: 88 HLGFYNPPAFLTVPHVKKSLWIPDTFFPTEKAAHRHLIDMENMFLRIHPDGKVLY 142
>gi|405975278|gb|EKC39856.1| Glycine receptor subunit alpha-2 [Crassostrea gigas]
Length = 316
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 100/159 (62%), Gaps = 1/159 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++ SC M+ YP D Q C ++MES SH+ L+ +W + P + + LPQ +
Sbjct: 42 RVSGVFSCMMDLHKYPLDKQICDIRMESYSHSASTLVVRWR-DTPAEISSTLRLPQFDIT 100
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
++ C Q Y N+TC+ + L+R +GYYL TY+P L+VI+SWV+FW+ +A PA
Sbjct: 101 LMRSFFCDQQYMGINYTCIGLDIHLERNIGYYLTQTYVPCVLVVILSWVNFWLSIDAVPA 160
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
R++LG+ ++LT++TQ + + L VSY+KA+D ++ AC
Sbjct: 161 RISLGLLTVLTMTTQSSAAVRGLTVVSYVKAMDVWIFAC 199
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARLLTGQPMIPPNHQQAQR 352
FVF L+E+ VN+ +++ + +L + N P Q+
Sbjct: 202 FVFAGLLEFAWVNV--------SNRVESRRKSVLDLPSLVNGNAKRSPKTESPTSQREGF 253
Query: 353 NLA-QRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+ + R +A NIDR SR FP F + N YW+++
Sbjct: 254 SFTPSKNREKARNIDRVSRFLFPAAFILFNVGYWLVY 290
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 251 LKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY--MVKFVFMALME 300
+ +W PD + N K F T+T+PN +++Y D +LY V VF +M+
Sbjct: 1 MDKIWVPDLYIINEKTAKFHTVTVPNKMMYIYPDGLVLYSARVSGVFSCMMD 52
>gi|345327584|ref|XP_001513550.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Ornithorhynchus anatinus]
Length = 464
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDTQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 328
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 68 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTTNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTENIMLRVFPDGHVLYSMRITVTAM 177
>gi|242002110|ref|XP_002435698.1| histamine-gated chloride channel subunit, putative [Ixodes
scapularis]
gi|215499034|gb|EEC08528.1| histamine-gated chloride channel subunit, putative [Ixodes
scapularis]
Length = 112
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/80 (73%), Positives = 67/80 (83%)
Query: 217 TYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPN 276
TY ADIF +Q+W DHRLRLP NMT++YRLL V WLK MWRPDSFFKNAK VTFQ MTIPN
Sbjct: 10 TYVADIFMSQSWYDHRLRLPRNMTAKYRLLPVSWLKRMWRPDSFFKNAKRVTFQEMTIPN 69
Query: 277 HYVWLYKDKTILYMVKFVFM 296
HY+WLY D++ILYMVK +
Sbjct: 70 HYIWLYSDRSILYMVKLTLL 89
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMES 33
+LTL LSC M F YPHDTQ C++++ES
Sbjct: 85 KLTLLLSCVMKFETYPHDTQVCTMKIES 112
>gi|268579645|ref|XP_002644805.1| C. briggsae CBR-GGR-2 protein [Caenorhabditis briggsae]
Length = 499
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 102/159 (64%), Gaps = 2/159 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+++ + C +N +P D+Q C L++ S ++TT+ L+ +W E P+ + I + + +V
Sbjct: 97 RISMVVVCTLNLEKWPLDSQRCHLRILSYAYTTEQLVIKWKEEEPITRNPNIAMSDMHIV 156
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
C YSTG ++C+ F +KR + +++ +Y+PT LIV++S FW+ EA PA
Sbjct: 157 DLYPGLCDGNYSTGTWSCVTAEFFVKREITHHVMQSYVPTTLIVVIS--CFWLDVEAVPA 214
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+L +T+LLTLSTQ ++ +LP VSY+KA+D +M AC
Sbjct: 215 RVSLAITTLLTLSTQANAARMALPEVSYMKAIDVWMGAC 253
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 197 TIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWR 256
T+V + + G+ S +M + D++F Q W+D RL N T + + L MW
Sbjct: 4 TVVELAMYIEGMSSFRTQTMDFQLDVYFQQFWRD--PRLAHNETRRVLVKDKAVLHKMWH 61
Query: 257 PDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNI 306
PD +F NA+ F +T PN VW+ D +ILY + ++++ C +N+
Sbjct: 62 PDVYFANARIAEFHEVTQPNFLVWIQPDGSILYDTR---ISMVVVCTLNL 108
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 348 QQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+Q Q++ R RA ID+ SR FP+ F I N TYWI +
Sbjct: 454 KQIQKHKEIAGRNRAKKIDQSSRWIFPLTFIIFNLTYWIYY 494
>gi|391339617|ref|XP_003744144.1| PREDICTED: uncharacterized protein LOC100906164 [Metaseiulus
occidentalis]
Length = 1203
Score = 135 bits (339), Expect = 4e-29, Method: Composition-based stats.
Identities = 63/164 (38%), Positives = 102/164 (62%), Gaps = 5/164 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
RLT+ SC M+ +P D Q C++++ES +T D+ + W D + + E+++LPQ ++
Sbjct: 168 RLTVTASCPMDLRYFPMDRQSCTIEIESFGYTMSDIRYSWRDGAKSVGISEEVQLPQFKI 227
Query: 65 VKNKTADCSQVYSTGNFTCL--EVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ STGN++ L E+ FV R +GYYL Y+P LIV++SWVSFW+ A
Sbjct: 228 QGHVQKASEISLSTGNYSRLICEIRFV--RSMGYYLIQIYVPAGLIVVISWVSFWLHRNA 285
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
PARV LGV ++LT++T + + + LP +SY+K++D ++ C V
Sbjct: 286 TPARVALGVMTVLTMTTLMSSTNSQLPKISYVKSIDVYLGTCFV 329
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 52/116 (44%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTS 241
K YDK P G P V + ++ + ++ E M + +D +F Q+W+D RL P
Sbjct: 58 KGYDKRVRPNYGGPPVKVGVSMQIVSISAVSEVQMDFTSDFYFRQSWRDERLSFPRTNEL 117
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ + +W PD+FF N K F T PN ++ + D + ++ A
Sbjct: 118 SQMTVGAEVAGKIWVPDTFFANEKTAYFHIATTPNTFLRIGSDGDVYRSIRLTVTA 173
>gi|291244092|ref|XP_002741938.1| PREDICTED: glycine receptor, alpha 4b-like [Saccoglossus
kowalevskii]
Length = 854
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
RL+L LSC M +P DTQEC LQ+ES S+ +L+ W + + +ELPQ L
Sbjct: 585 RLSLVLSCYMFLGKFPMDTQECHLQLESFSYNAKELVLTWLQNTTAVEIHGGVELPQYYL 644
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ + Y TG+FT L V F+L R LG+Y+ Y+P+ L+V +SW+S W++ AAP
Sbjct: 645 ERIEDYANVTHYMTGDFTHLGVRFILVRSLGFYVLQAYVPSSLLVALSWLSVWVEISAAP 704
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++L L TQ ++ LP ++Y A+D +M C V
Sbjct: 705 ARVALGVTTVLALVTQATWLRSQLPKIAYATAIDVWMVTCQV 746
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 100/162 (61%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
RL+L LSC M +P DTQEC +Q+ES S+ ++L+ +W + + +++ELPQ L
Sbjct: 159 RLSLVLSCYMFLGKFPMDTQECHMQLESYSYNMNELVLKWLTNTTAVEIHDEVELPQYYL 218
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
K Y TG+FT L V F L R LG+Y+ Y+P+ L+V +SW+S W++ AAP
Sbjct: 219 EGIKEFANVTHYMTGDFTHLGVSFSLVRSLGFYVLQAYVPSSLLVALSWLSVWVEISAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++L L TQ ++ LP ++Y A+D +M C V
Sbjct: 279 ARVALGVTTVLALVTQATWLRSQLPKIAYATAIDVWMVTCQV 320
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 179 EDPKLYDKMRP-------PKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDH 231
ED KL +M P EG+PTIV ++ + DS+ E+SM Y IF Q+W D
Sbjct: 467 EDLKLLSQMGDSKISKLRPTVEGEPTIVSCNININSFDSVSESSMDYELTIFLRQSWYDP 526
Query: 232 RLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMV 291
RLR N T + D + +W PD FF NAK+VT + N V + + +LY +
Sbjct: 527 RLR--HNSTGTIVINGGDVMDMVWVPDLFFTNAKSVTIHSTPKENLLVRIEPNGDVLYSL 584
Query: 292 KF 293
+
Sbjct: 585 RL 586
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 186 KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRL 245
K+RP + G+PT+V ++ + DS+ E+SM Y IF Q W D RLR N TS +
Sbjct: 56 KLRPTVR-GEPTVVSCNININSFDSVSESSMDYELTIFLRQAWHDPRLR--HNSTSTIVI 112
Query: 246 LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
D + W PD FF NAK+VT + N + + +LY ++
Sbjct: 113 NGGDVMDMFWVPDLFFTNAKSVTIHSTPKENLLLRIDPSGNVLYSLRL 160
>gi|341890853|gb|EGT46788.1| hypothetical protein CAEBREN_18708 [Caenorhabditis brenneri]
Length = 383
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 98/168 (58%), Gaps = 9/168 (5%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C ++ YP D Q C +++ S +H +++ W P P+ + +I+LP+ +
Sbjct: 104 RVTLNLACNLDLKDYPLDYQTCYIKVISYAHVKNEMNVTWFPNDPIRFNPEIDLPEFHIR 163
Query: 66 KNKTADCSQVY---------STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSF 116
C+ V+ G F+CL + LKR +G++L +YIPT LIV +SWVSF
Sbjct: 164 ALDKDYCNGVFLYTLTHNSSRVGEFSCLLGMLKLKRAIGFHLVQSYIPTALIVAISWVSF 223
Query: 117 WIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
WI A PARV+L T+LLTLSTQ + +LP VSY KA+D F C
Sbjct: 224 WIDRRAVPARVSLSFTTLLTLSTQGNGIRYALPAVSYAKAIDYFYGVC 271
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 192 KEGQPTI---VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEV 248
+ G P + V+F V L + MTY D++ +W+D +R N + + +
Sbjct: 3 RNGNPKVPLQVHFGFYVESLGNFRATEMTYDMDMYLYMSWQDDTMR--HNGSEHVLVNDK 60
Query: 249 DWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
D L +W PD +F NA+ F +T+ N +++ T+ Y +
Sbjct: 61 DILDKIWLPDLYFANARTAYFHKVTVHNFNMFISPQGTVSYGTR 104
>gi|392894217|ref|NP_497489.3| Protein LGC-42 [Caenorhabditis elegans]
gi|373220335|emb|CCD73017.1| Protein LGC-42 [Caenorhabditis elegans]
Length = 412
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 98/168 (58%), Gaps = 9/168 (5%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C ++ YP D Q C +++ S +H +++ W P P+ + +I+LP+ +
Sbjct: 134 RVTLNLACNLDLKDYPLDYQTCYIKVISYAHVKNEMNVSWFPNDPIRFNPEIDLPEFHIR 193
Query: 66 KNKTADCSQVY---------STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSF 116
C+ V+ G F+CL + LKR +G++L +YIPT LIV +SWVSF
Sbjct: 194 ALDKDYCNGVFLYTLTHNSSRVGEFSCLLGMLKLKRAIGFHLVQSYIPTGLIVAISWVSF 253
Query: 117 WIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
WI A PARV+L T+LLTLSTQ + +LP VSY KA+D F C
Sbjct: 254 WIDRRAVPARVSLSFTTLLTLSTQGNGIRYALPAVSYAKAIDYFYGVC 301
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 188 RPPKKEGQPTI---VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYR 244
+P + G P V+F V L + MTY D++ +W+D +R N T
Sbjct: 29 KPMPRNGNPKAPLQVHFGFYVESLGNFRATEMTYDMDMYLYMSWQDDSMR--HNETEHVL 86
Query: 245 LLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+ + D L +W PD +F NA+ F +T+ N +++ TI Y +
Sbjct: 87 VNDKDILDKIWLPDLYFANARTAYFHKVTVHNFNMFISPQGTISYGTR 134
>gi|402585300|gb|EJW79240.1| hypothetical protein WUBG_09851, partial [Wuchereria bancrofti]
Length = 271
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIELPQLQL 64
RLTL L+C MN + YP D QEC + S ++TT D++++WD + + D LP ++
Sbjct: 89 RLTLILACQMNLIRYPMDVQECLIDFASYAYTTTDIVYKWDRAAITIDKDANNALPNFRI 148
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ C +TG ++CL V L R ++L YIP+ ++V +SWVS+WI ++
Sbjct: 149 SAFENKSCDSTTNTGTYSCLRVELKLSRVFSFFLLQLYIPSTMLVGVSWVSYWIDWKSTA 208
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV L + +LLT+ TQ ++LPPVSY KA+D ++ AC V
Sbjct: 209 ARVPLAIVTLLTMITQSHAINSNLPPVSYTKAIDIWIGACVV 250
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYR---LLEVDWLKNMWRPDSFFKNAKAVTFQT 271
S + A F Q W D+RLR ++ S++R + V + +W PD+FF+N + +
Sbjct: 11 SQEFVAQFRFQQEWFDNRLRYTDH--SDFRNFDFIHVARDQVLWIPDTFFQNERNGWYHM 68
Query: 272 MTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIV 307
+ N ++ L D ++Y + + L+ C +N++
Sbjct: 69 LDQENKFIKLRSDGKVIYNRR---LTLILACQMNLI 101
>gi|268575750|ref|XP_002642855.1| Hypothetical protein CBG15124 [Caenorhabditis briggsae]
Length = 383
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 98/168 (58%), Gaps = 9/168 (5%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C ++ YP D Q C +++ S +H +++ W P P+ + +I+LP+ +
Sbjct: 104 RVTLNLACNLDLKDYPLDYQTCYIKVISYAHVKNEMNVTWFPNDPIRFNPEIDLPEFHIR 163
Query: 66 KNKTADCSQVY---------STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSF 116
C+ V+ G F+CL + LKR +G++L +YIPT LIV +SWVSF
Sbjct: 164 ALDKDYCNGVFLYTLTHNSSRVGEFSCLLGMLKLKRAIGFHLVQSYIPTALIVAISWVSF 223
Query: 117 WIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
WI A PARV+L T+LLTLSTQ + +LP VSY KA+D F C
Sbjct: 224 WIDRRAVPARVSLSFTTLLTLSTQGNGIRYALPAVSYAKAIDYFYGVC 271
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 195 QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNM 254
+P V+F V L + MTY D++ +W+D ++ N + + + D L +
Sbjct: 9 EPLQVHFGFYVESLGNFRATEMTYDMDMYLYMSWQDDTMK--HNGSEHVLVNDKDVLDKI 66
Query: 255 WRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
W PD +F NA+ F +T+ N +++ T+ Y +
Sbjct: 67 WLPDLYFANARTAYFHKVTVHNFNMFISPQGTVSYGTR 104
>gi|170590962|ref|XP_001900240.1| Cation transporter family protein [Brugia malayi]
gi|158592390|gb|EDP30990.1| Cation transporter family protein [Brugia malayi]
Length = 510
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 106/188 (56%), Gaps = 1/188 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIELPQLQL 64
RLTL L+C MN + YP D QEC + S ++TT D++++WD + + D LP ++
Sbjct: 187 RLTLILACQMNLIRYPMDVQECLIDFASYAYTTTDIVYKWDRAAITIDKDANNALPNFRI 246
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ C +TG ++CL V L R ++L YIP+ ++V +SWVS+WI ++
Sbjct: 247 SAFENKSCDSTTNTGTYSCLRVELRLSRVFSFFLLQLYIPSTMLVGVSWVSYWIDWKSTA 306
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLY 184
ARV L + +LLT+ TQ ++LPPVSY KA+D ++ AC V + + ++
Sbjct: 307 ARVPLAIVTLLTMITQSHAINSNLPPVSYTKAIDIWIGACVVFIFASLIEYAVVNYVGIF 366
Query: 185 DKMRPPKK 192
DK R +K
Sbjct: 367 DKHREVRK 374
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 180 DPKLYDKMRPPKKEGQ-PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN 238
DP + R P + + P IV+ + + + +I E +M + A F Q W D RLR ++
Sbjct: 73 DPTVRPSGRMPXNDQKGPVIVWTSLEIRSISAISERNMEFVAQFRFQQEWFDDRLRYTDH 132
Query: 239 MTSEYR---LLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVF 295
S++R + V + +W PD+FF+N + + + N ++ L D ++Y +
Sbjct: 133 --SDFRNFDFIHVARDQVLWIPDTFFQNERNGWYHMLDQENKFIKLRSDGKVIYNRR--- 187
Query: 296 MALMEYCLVNIV 307
+ L+ C +N++
Sbjct: 188 LTLILACQMNLI 199
>gi|443707247|gb|ELU02929.1| hypothetical protein CAPTEDRAFT_219971 [Capitella teleta]
Length = 234
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 98/161 (60%), Gaps = 6/161 (3%)
Query: 35 SHTTDDLIFQWDPEM-PLAVDEKIELPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRR 93
+T +++ F+W + + ++ I+ PQ LV C + Y TGNFTCL +F L R
Sbjct: 13 GYTLEEMKFEWRSDKDAVQINPHIQFPQFDLVDKNVTYCQKSYITGNFTCLRAVFHLHRH 72
Query: 94 LGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSY 153
GYY+ YIP+ LIV++SWVSFWI +A PAR+TLGV ++LT++TQ SLP VSY
Sbjct: 73 FGYYMIQNYIPSGLIVVLSWVSFWISTDAVPARITLGVLTVLTMTTQCVGIWMSLPMVSY 132
Query: 154 LKAVDAFMSACTVSS--TSLTF---NDILPEDPKLYDKMRP 189
+KA+D +MS C +S L F N + ++ + KMRP
Sbjct: 133 IKAIDIWMSTCVMSVFFAMLEFAVVNTMSRKEARDMAKMRP 173
>gi|291224453|ref|XP_002732218.1| PREDICTED: gamma-aminobutyric acid (GABA) A receptor, beta 3-like
[Saccoglossus kowalevskii]
Length = 1252
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIELPQLQL 64
R+T LSC M+ YP D Q C+L++ES +TT+D+ + W + E ++LPQ L
Sbjct: 159 RITTVLSCMMDLHDYPLDVQNCTLEIESYGYTTEDVTYAWQYGNRSVQGLEDVQLPQFVL 218
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ + +STG++ L + F L+R +G+++ TY+P LIV++SWVSFWI EA
Sbjct: 219 EEYRLVKRQAAFSTGSYPRLSLEFRLRRSVGFFILQTYLPCILIVMLSWVSFWINHEATS 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
ARV LG+T++LT++T +ASLP +SY+KA+D ++
Sbjct: 279 ARVALGITTVLTMTTISTSVRASLPRISYIKAIDIYL 315
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP---EN 238
K YD P P V + + ++SI E +M Y ++F Q WKD RL N
Sbjct: 51 KTYDIRLRPNFGDSPVTVEMDMDISSMNSISEVNMDYTLTMYFRQYWKDERLAYDPRFGN 110
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFV---- 294
++ + R+ +W PD++F N K +T+ N + + D ++LY ++
Sbjct: 111 ISFDGRM-----ANRIWVPDTYFVNDKHAFIHDVTVANRMIRFHYDGSVLYGLRITTVLS 165
Query: 295 -FMALMEYCL 303
M L +Y L
Sbjct: 166 CMMDLHDYPL 175
>gi|268573708|ref|XP_002641831.1| Hypothetical protein CBG16500 [Caenorhabditis briggsae]
Length = 454
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 102/159 (64%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT+ +C M+ +P D QEC+L++ES ++T D+I+ W + +DE + L +
Sbjct: 198 RLTVTANCPMSLHTFPLDRQECALEVESYGYSTKDIIYHWHGANAVTIDENVHLAHFTIG 257
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
++ + + STGN++ L F+ KR +G+YL Y P+ LIV++SWVSFW+ EA A
Sbjct: 258 EHYHIERTISLSTGNYSRLTAYFMFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQA 317
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV +GVT++LT++T + ASLP VSY+K++D F+ C
Sbjct: 318 RVAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDVFLGVC 356
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 202 HVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFF 261
HVT + ++ E SM Y D++ Q WKD RL E+ + + +D +K +W PD+FF
Sbjct: 111 HVTTIS--AVSEVSMDYTLDLYLRQIWKDPRLAW-ESDVEDSLTIGIDMVKTIWTPDTFF 167
Query: 262 KNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
N K F T N ++ + +L ++ A
Sbjct: 168 PNEKKSFFHEATSHNSFLRIDSHGNVLRSIRLTVTA 203
>gi|312077769|ref|XP_003141449.1| hypothetical protein LOAG_05864 [Loa loa]
gi|307763388|gb|EFO22622.1| hypothetical protein LOAG_05864 [Loa loa]
Length = 511
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIELPQLQL 64
RLTL L+C MN + YP D QEC + S ++T++D++++WD + + D LP ++
Sbjct: 188 RLTLILACQMNLVRYPMDVQECLIDFASYAYTSNDIVYKWDRAAIKIDKDANNALPNFRI 247
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ C +TG ++CL V L R ++L YIP+ ++V +SWVS+WI ++
Sbjct: 248 SAFENKSCDSTTNTGTYSCLRVELRLSRVFSFFLLQLYIPSAMLVGVSWVSYWIDWKSTA 307
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV L + +LLT+ TQ ++LPPVSY KA+D ++ AC V
Sbjct: 308 ARVPLAIVTLLTMITQSHAINSNLPPVSYTKAIDIWIGACVV 349
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 180 DPKLYDKMR-PPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN 238
DP + R P + P IV+ + + + +I E +M + A F Q W D RLR ++
Sbjct: 74 DPTVRPSGRMPTNDQKGPVIVWTSLEIRSISAISERNMEFVAQFRFQQEWFDDRLRFTDH 133
Query: 239 MTSEYR---LLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVF 295
S++R + V + +W PD+FF+N + + + N ++ L D ++Y +
Sbjct: 134 --SDFRNFDFIHVARDQVLWTPDTFFQNERNGWYHMLDQENKFIKLRSDGKVIYNRR--- 188
Query: 296 MALMEYCLVNIV 307
+ L+ C +N+V
Sbjct: 189 LTLILACQMNLV 200
>gi|311244175|ref|XP_003121344.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like [Sus
scrofa]
Length = 465
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 328
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 68 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAM 177
>gi|341874618|gb|EGT30553.1| CBN-LGC-40 protein [Caenorhabditis brenneri]
Length = 490
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPL-AVDEK--IELPQL 62
R+++ SC M+ YP D+QEC+L++ S ++ L W + + A+D I +P +
Sbjct: 146 RISIVSSCNMDLWKYPLDSQECALRILSYAYPMTVLRLLWSEKEDVPAIDRNPDITMPDM 205
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
L +T C+ Y+TG ++C+ IF ++R + +++ TY+PT LIV++SW +FW++ ++
Sbjct: 206 SLKHIRTGYCNGTYATGEWSCMTAIFYVEREMMHHVMQTYVPTALIVVISWFNFWLEIDS 265
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
APARV+L +T+LLT+STQ + +LP VSY+KA+D +M +C
Sbjct: 266 APARVSLSITTLLTISTQANAVKLALPEVSYMKAIDVWMGSC 307
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 179 EDPKLYDKMRPPKK-EGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE 237
++ LY+K P + +G PT V + + G+ S +M Y D++F + W DHRL
Sbjct: 34 KNETLYNKFATPTQYDGVPTNVTLSMFIEGMSSFSAQTMDYHLDVYFQEEWYDHRL--AH 91
Query: 238 NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
N ++ + +++ K MW PD +F NA++ FQ +T N VW+Y + + Y
Sbjct: 92 NASAPILVRDLEVFKMMWHPDVYFANARSAAFQDITDDNFLVWVYPNGRVWY 143
>gi|449265554|gb|EMC76734.1| Gamma-aminobutyric acid receptor subunit rho-2 [Columba livia]
Length = 464
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKNGNESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 328
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 68 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTTNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
>gi|74894417|sp|P91730.1|GLUCB_HAECO RecName: Full=Glutamate-gated chloride channel subunit beta;
Short=Glu-Cl subunit beta; AltName:
Full=Avermectin-sensitive glutamate-gated chloride
channel subunit; AltName: Full=HG4; Flags: Precursor
gi|1743244|emb|CAA70929.1| glutamate gated chloride channel beta subunit [Haemonchus
contortus]
Length = 432
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 99/162 (61%), Gaps = 3/162 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI--ELPQLQ 63
R+++ SC M +YP D Q C + S +HT D++++WDP P+ + + +LP Q
Sbjct: 157 RISITSSCHMQLQLYPLDLQFCDFDLVSYAHTMKDIVYEWDPLAPVQLKPGVGSDLPNFQ 216
Query: 64 LVKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
L T D C+ +TG++ CL + LKR+ YYL Y PT +IVI+SWVSFWI +
Sbjct: 217 LTNITTNDDCTSHTNTGSYACLRMQLTLKRQFSYYLVQLYGPTTMIVIVSWVSFWIDMHS 276
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV LGVT+LLT++T A A LPPVSY+K VD ++ AC
Sbjct: 277 TAGRVALGVTTLLTMTTMQAAINAKLPPVSYVKVVDVWLGAC 318
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 174 NDILPEDPKLYD-KMRPPKKEGQ----PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+IL E YD ++RPP P V ++ + L ID +M Y+ + F + W
Sbjct: 32 QEILNELLSNYDMRVRPPPSNYSDPMGPVTVRVNIMIRMLSKIDVVNMEYSMQLTFREQW 91
Query: 229 KDHRLRLPE-NMTSEYRLLEVDWLK-NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKT 286
D RL + + L V +K N+W PD+FF KA + N ++ ++ D
Sbjct: 92 LDSRLAYAHLGYHNPPKFLTVPHIKSNLWIPDTFFPTEKAAHRHLIDTDNMFLRIHPDGK 151
Query: 287 ILY 289
+LY
Sbjct: 152 VLY 154
>gi|324519861|gb|ADY47499.1| Glutamate-gated chloride channel [Ascaris suum]
Length = 261
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 95/152 (62%), Gaps = 2/152 (1%)
Query: 15 MNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQLVKNKTADC 72
M+ YP D Q C + + S ++TTDD+ ++W P+ E + LP +L T C
Sbjct: 1 MSLEYYPLDRQTCLIDLASYAYTTDDIKYEWKLTNPIQQKEGLRQSLPSFELQDVLTDYC 60
Query: 73 SQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVT 132
+ +TG ++C V +L+R YYL YIP ++V++SWVSFW+ +A PARV+LGVT
Sbjct: 61 TSKTNTGEYSCARVKLLLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAVPARVSLGVT 120
Query: 133 SLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+LLT++TQ + + LPPVSY+KAVD ++ C
Sbjct: 121 TLLTMTTQASGINSKLPPVSYIKAVDVWIGVC 152
>gi|301622061|ref|XP_002940361.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Xenopus (Silurana) tropicalis]
Length = 492
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T +DL+ W L DEKI L Q +
Sbjct: 198 RITVTAMCNMDFSRFPLDTQTCSLELESYAYTDEDLMLYWKKGNESLKTDEKISLSQFLI 257
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 258 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 317
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 318 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 355
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 16/179 (8%)
Query: 129 LGVTSLLTLSTQ---HAKSQ-ASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLY 184
LG+ L L+T+ H K + A V +++A + ++ ND L +
Sbjct: 33 LGLIFCLVLATESRRHRKRRWAGQLEVQHMQASHVYKKNHDITKLRRNKNDQLLRVDEHD 92
Query: 185 DKMRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENM 239
MRP G P I V V V LDSI E M + ++ WKD RL P ++M
Sbjct: 93 FTMRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSSTNKSM 150
Query: 240 TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
T + RL +K +W PD FF ++K T N + +Y D +LY ++ A+
Sbjct: 151 TFDSRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVYPDGHVLYSMRITVTAM 204
>gi|268577801|ref|XP_002643883.1| Hypothetical protein CBG02128 [Caenorhabditis briggsae]
Length = 497
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPL-AVDEK--IELPQL 62
R+++ SC M+ YP D+QEC+L++ S ++ L W + + A+D I +P +
Sbjct: 146 RISIVSSCNMDLWKYPLDSQECALRILSYAYPMTVLRLLWSEKEDVPAIDRNPDITMPDM 205
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
L +T C+ Y+TG ++C+ IF ++R + +++ TY+PT LIV++SW +FW++ ++
Sbjct: 206 SLKHIRTGYCNGTYATGEWSCMTAIFYVEREMMHHVMQTYVPTALIVVISWFNFWLEIDS 265
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
APARV+L +T+LLT+STQ + +LP VSY+KA+D +M +C
Sbjct: 266 APARVSLSITTLLTISTQANAVKLALPEVSYMKAIDVWMGSC 307
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 160 FMSA-CTVSSTSLTFNDILPEDPKLYDKMR----------PPKKEGQPTIVYFHVTVMGL 208
F++A C ++S T + +P K DK++ P + + PT V + + G+
Sbjct: 5 FLTAFCILNSFEPTNSAFIPLTKKFLDKLKNETLYNKFATPTQYDDVPTNVTLSMFIEGM 64
Query: 209 DSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVT 268
S +M Y D++F + W DHRL N T+ + +++ K MW PD +F NA++
Sbjct: 65 SSFSAQTMDYHLDVYFQEEWYDHRL--AHNNTAPILVRDLEVFKMMWHPDVYFANARSAA 122
Query: 269 FQTMTIPNHYVWLYKDKTILY 289
FQ +T N VW+Y + + Y
Sbjct: 123 FQDITDDNFLVWVYPNGRVWY 143
>gi|241121565|ref|XP_002403250.1| glycine receptor alpha 1 variant, putative [Ixodes scapularis]
gi|215493391|gb|EEC03032.1| glycine receptor alpha 1 variant, putative [Ixodes scapularis]
Length = 254
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 107/161 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL+L+C M+F +P DTQ C + + + T D W + P+ ++ IE+P+ LV
Sbjct: 77 RLTLRLACFMSFRHFPLDTQRCHILLGPYAQTIDQTAISWQDKDPIVIEHPIEMPEFDLV 136
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ ++ TG F+ L V F L+R+ GY+L TY+PT LIV++SWVSFW+ +A PA
Sbjct: 137 HHSYGQFNRAIDTGVFSFLNVTFTLERQNGYHLIQTYLPTFLIVMISWVSFWLNVDATPA 196
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVT+LLT++T + + LPPVSY+KA+D ++ AC+V
Sbjct: 197 RVTLGVTTLLTMTTVASGVRTQLPPVSYVKAIDVWIGACSV 237
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 218 YAADIFFAQTWKDHRLRLPEN-MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPN 276
Y DI+ Q+W+D RL L ++ ++S + D + +W+PD FF+N K F +T+PN
Sbjct: 2 YGMDIYLRQSWRDRRLNLSQHGVSSTVTINGEDIMSKIWKPDLFFRNVKDAKFHHVTVPN 61
Query: 277 HYVWLYKDKTILYMVKFV-----FMALMEYCL----VNIVLG 309
V + D +L+ ++ FM+ + L +I+LG
Sbjct: 62 KLVKIGPDGEVLFSMRLTLRLACFMSFRHFPLDTQRCHILLG 103
>gi|308465493|ref|XP_003095006.1| CRE-LGC-38 protein [Caenorhabditis remanei]
gi|308246271|gb|EFO90223.1| CRE-LGC-38 protein [Caenorhabditis remanei]
Length = 460
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 102/159 (64%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT+ +C M+ +P D QEC+L++ES ++T D+I+ W + +DE + L +
Sbjct: 170 RLTVTANCPMSLHTFPLDRQECALEVESYGYSTKDIIYHWHGTNAVTIDENVHLAHFTIG 229
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
++ + + STGN++ L F+ KR +G+YL Y P+ LIV++SWVSFW+ EA A
Sbjct: 230 EHYHIERTISLSTGNYSRLTAYFMFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQA 289
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV +GVT++LT++T + ASLP VSY+K++D F+ C
Sbjct: 290 RVAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDVFLGVC 328
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
+D+ P G P V V + ++ E SM Y D++ Q WKD RL E+ +
Sbjct: 63 HDRRIRPNYGGPPIEVNITAHVTTISAVSEVSMDYTLDLYLRQIWKDPRLAW-ESDVEDS 121
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +D +K +W PD+FF N K F T N ++ + +L ++ A
Sbjct: 122 LTIGIDMVKTIWTPDTFFPNEKKSFFHEATSHNSFLRIDSHGNVLRSIRLTVTA 175
>gi|355757709|gb|EHH61234.1| hypothetical protein EGM_19193 [Macaca fascicularis]
Length = 490
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 196 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 255
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 256 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 315
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 316 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 353
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 93 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTF 150
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 151 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 202
>gi|269856293|gb|ACZ51429.1| GABA-gated chloride channel [Nasonia vitripennis]
Length = 460
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 107/167 (64%), Gaps = 1/167 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIEL 59
+T RLT+ SC MN +P D Q C++++ES +T D+ ++W+ + + + ++EL
Sbjct: 120 ITRSIRLTITASCPMNLQYFPMDRQLCNIEIESFGYTMRDIRYKWNSGLQSVGISSEVEL 179
Query: 60 PQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIK 119
PQ +++ ++ + STGN++ L R +GYYL YIP+ LIVI+SWVSFW+
Sbjct: 180 PQFRVLGHRQRQTTIHLSTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLN 239
Query: 120 PEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A PARV LGVT++LT++T + + A+LP +SY+K++D ++ C V
Sbjct: 240 RNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 286
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + V+ + S+ E M + D +F Q W D RL + E
Sbjct: 17 YDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDPRLAFKKRAGVEI 76
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +++KN+W PD+FF N K F T N ++ ++ +I ++ A
Sbjct: 77 LSVGSEFIKNIWVPDTFFVNEKQSYFHVATTSNEFIRIHHTGSITRSIRLTITA 130
>gi|391329184|ref|XP_003739056.1| PREDICTED: glycine receptor subunit alpha-3-like [Metaseiulus
occidentalis]
Length = 490
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 102/161 (63%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL L+C M F YP DTQ C++ + + + T D W P+ ++ IELP+ L
Sbjct: 228 RLTLSLACVMVFRYYPLDTQRCNVILGAYAQTIDQTHISWQTHKPIVIESPIELPEFDLT 287
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ ++ TG F+ L V L R+ GY+L TY+PT LIV +SWVSFW+ +A PA
Sbjct: 288 GHTYGSFNRTVDTGTFSFLNVTLTLARQNGYHLIQTYLPTFLIVTISWVSFWLNIDATPA 347
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVT+LLT++T A + LPPVSY+KA+D ++ AC+V
Sbjct: 348 RVTLGVTTLLTMTTVAAGVRTQLPPVSYVKAIDVWIGACSV 388
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 136 TLSTQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMR-PPKKEG 194
+ +++ +QA P V A S+ +S L F D + E YDK P EG
Sbjct: 78 STTSEFEDAQADAPMVH-----QADQSSNYAASHRLAFLDKVLEG---YDKRAWPTYGEG 129
Query: 195 QPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE-NMTSEYRLLEVDWLKN 253
+PT V ++ V + I +M Y DI+ Q+W D RL L + L D ++
Sbjct: 130 RPTEVKVNIHVNSIGPIVAANMEYGMDIYLRQSWTDKRLNLSRFGINYTVTLNGEDLMEK 189
Query: 254 MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVF-----MALMEYCL----V 304
+W+PD FF+N K F +T+PN V + D +LY ++ M Y L
Sbjct: 190 IWKPDLFFRNVKRAAFHRVTVPNMLVRIAPDGEVLYSMRLTLSLACVMVFRYYPLDTQRC 249
Query: 305 NIVLG 309
N++LG
Sbjct: 250 NVILG 254
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 294 VFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARLLTGQPMIPPNHQQAQRN 353
VF AL+E+ LVN L S + +P E K F A K++A + P H N
Sbjct: 390 VFGALLEFTLVN-YLSRSKM-RPEEFRKSMNPF--ARKKDAD--SSAPSSKDGHHSDLPN 443
Query: 354 LA----QRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
QR RA +DR SR+ FP +F + N YW +
Sbjct: 444 GRPYELQRNVKRAQMVDRASRIMFPFMFLVFNTVYWTFY 482
>gi|410959656|ref|XP_003986419.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Felis
catus]
Length = 465
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 328
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 68 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTNNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
>gi|110555506|gb|ABG75733.1| GABA-gated chloride channel [Apis mellifera]
Length = 445
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 106/167 (63%), Gaps = 1/167 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIEL 59
+T RLT+ SC MN +P D Q C +++ES +T D+ ++W+ + + + ++EL
Sbjct: 126 ITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNAGLQSVGISNEVEL 185
Query: 60 PQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIK 119
PQ +++ ++ + STGN++ L R +GYYL YIP+ LIVI+SWVSFW+
Sbjct: 186 PQFRVLGHRQRHSTIHLSTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLN 245
Query: 120 PEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A PARV LGVT++LT++T + + A+LP +SY+K++D ++ C V
Sbjct: 246 RNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 292
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + V+ + S+ E M + D +F Q W D RL + E
Sbjct: 23 YDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDPRLAFKKRTGVET 82
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +++KN+W PD+FF N K F T N ++ ++ +I ++ A
Sbjct: 83 LSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITA 136
>gi|341896097|gb|EGT52032.1| hypothetical protein CAEBREN_09255 [Caenorhabditis brenneri]
Length = 418
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 101/159 (63%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT+ +C M+ +P D QEC+L++ES ++T D+I+ W + +DE + L +
Sbjct: 127 RLTVTANCPMSLHTFPLDRQECALEVESYGYSTKDIIYHWHGANAVTIDENVHLAHFTIG 186
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
++ + + STGN++ L F KR +G+YL Y P+ LIV++SWVSFW+ EA A
Sbjct: 187 EHYHIERTISLSTGNYSRLTAYFSFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQA 246
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV +GVT++LT++T + ASLP VSY+K++D F+ C
Sbjct: 247 RVAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDVFLGVC 285
>gi|326916205|ref|XP_003204400.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Meleagris gallopavo]
Length = 488
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + L DEKI L Q +
Sbjct: 195 RITVTAMCNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKNGNESLKTDEKISLSQFLI 254
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 255 QKFHTTSRLAFYSSTGWYNRLYISFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 314
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 315 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 352
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 92 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTTNNSMTF 149
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 150 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAM 201
>gi|313225254|emb|CBY06728.1| unnamed protein product [Oikopleura dioica]
Length = 330
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 99/156 (63%), Gaps = 6/156 (3%)
Query: 4 EYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQL 62
E RL+ L+C M F +P D Q C L +ES ++ +DL F+W D + L +IELPQ
Sbjct: 73 EIRLSTLLTCHMKFQHFPMDVQTCGLMIESFAYDIEDLQFEWLDDGINL---RQIELPQH 129
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
++ C+ G+F+C+E F L R++GYY+ YIPT LIV++SW+SFWI
Sbjct: 130 KMEGLSLQQCN--CERGSFSCVEAKFYLSRQMGYYILQVYIPTTLIVMLSWISFWISINV 187
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVD 158
PARV+LG+T++LT+++Q + SLP VSY+ ++D
Sbjct: 188 TPARVSLGITTVLTITSQRSALTQSLPVVSYVMSID 223
>gi|194216259|ref|XP_001500725.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Equus caballus]
Length = 486
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 196 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 255
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 256 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 315
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 316 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 353
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 93 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSTSNKSMTF 150
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 151 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAM 202
>gi|327261555|ref|XP_003215595.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Anolis carolinensis]
Length = 489
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ C+L++ES ++T +DL+ W + L DEKI L Q +
Sbjct: 196 RITVTAMCNMDFSRFPLDTQTCTLELESYAYTDEDLMLYWKNGNESLKTDEKISLSQFLI 255
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 256 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 315
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 316 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 353
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRL 245
MRP G P I V V V LDSI E M + ++ WKD RL P +M
Sbjct: 93 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSHMNKSM-T 149
Query: 246 LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 150 FDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAM 202
>gi|321474710|gb|EFX85675.1| hypothetical protein DAPPUDRAFT_20229 [Daphnia pulex]
Length = 319
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 109/167 (65%), Gaps = 1/167 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIEL 59
+T R+T+ SC MN +P D+Q C +++ES TT+++ ++W D +++ ++EL
Sbjct: 116 ITRSMRITITASCPMNLKYFPLDSQLCPIEIESFGFTTNEIWYKWVDSPKAVSIFPEVEL 175
Query: 60 PQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIK 119
PQ Q++ + + S +TGN++ L R +GYYL YIP+ LIV++SWVSFWI
Sbjct: 176 PQFQVMGYRKREYSYSLTTGNYSRLACDIQFVRSMGYYLIQIYIPSSLIVVISWVSFWIN 235
Query: 120 PEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A+PARV+LGVT++LT++T + + A LP +SY+K++D ++ C V
Sbjct: 236 RNASPARVSLGVTTVLTMTTLMSSTNAQLPKISYVKSIDIYLGTCFV 282
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P + + ++ + S+ E +M + D++F Q W D RL E
Sbjct: 13 YDKRVRPNYGGIPVQIQVSMGIITISSLSEVTMDFTLDVYFRQFWTDDRLSFQRQRGVEI 72
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ ++L+NMW PD+FF N K T+T N +V + D I ++ A
Sbjct: 73 LSVSTEYLRNMWVPDTFFPNEKTAYLHTVTTSNEFVRIRHDGEITRSMRITITA 126
>gi|296484083|tpg|DAA26198.1| TPA: gamma-aminobutyric acid receptor subunit rho-2-like [Bos
taurus]
Length = 421
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 127 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 186
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 187 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 246
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 247 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 284
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 203 VTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTSEYRLLEVDWLKNMWRPD 258
V V LDSI E M + ++ WKD RL P ++MT + RL +K +W PD
Sbjct: 39 VQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSASNKSMTFDGRL-----VKKIWVPD 93
Query: 259 SFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
FF ++K T N + ++ D +LY ++ A+
Sbjct: 94 VFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAM 133
>gi|406035356|ref|NP_001071414.2| gamma-aminobutyric acid receptor subunit rho-2 precursor [Bos
taurus]
gi|410516950|sp|Q0II76.4|GBRR2_BOVIN RecName: Full=Gamma-aminobutyric acid receptor subunit rho-2;
AltName: Full=GABA(A) receptor subunit rho-2; AltName:
Full=GABA(C) receptor; Flags: Precursor
Length = 465
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 328
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 68 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSASNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAM 177
>gi|363732127|ref|XP_419839.3| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Gallus
gallus]
Length = 488
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + L DEKI L Q +
Sbjct: 195 RITVTAMCNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKNGNESLKTDEKISLSQFLI 254
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 255 QKFHTTSRLAFYSSTGWYNRLYISFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 314
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 315 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 352
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 92 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTTNNSMTF 149
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 150 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAM 201
>gi|456428|gb|AAA52510.1| gamma-amino butyric acid [Homo sapiens]
Length = 465
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLHWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT++T AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYL 328
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 68 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
>gi|241740051|ref|XP_002405186.1| glutamate-gated chloride channel, putative [Ixodes scapularis]
gi|215505680|gb|EEC15174.1| glutamate-gated chloride channel, putative [Ixodes scapularis]
Length = 252
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 100/167 (59%), Gaps = 13/167 (7%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+++KL+C M+ +PHD Q C + + SL H+ D ++ QW V + + L Q +++
Sbjct: 71 RVSMKLACNMDLTRFPHDNQLCDMLLSSLIHSNDSVVLQWKS---FRVTKNLSLSQFKVL 127
Query: 66 KNKTADCSQVYS--------TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFW 117
DC++ Y G F CL L+RR GYYL + Y P+ LIV MS+VSFW
Sbjct: 128 DGGHGDCTKKYELKRRTEFHAGTFGCLYGRLELRRRAGYYLINKYAPSTLIVAMSFVSFW 187
Query: 118 IKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ EA PARVTL VTSLLT+ TQ + Q++ P VSY+ A++ +M AC
Sbjct: 188 MPHEAVPARVTLSVTSLLTIVTQ--QYQSATPGVSYVVALNVWMIAC 232
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 221 DIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVW 280
D+F + W+D RL P + +L+ W ++W P+++FKN+ + P HY+
Sbjct: 4 DVFLHEEWRDPRLLAPADKV----VLDPRWHPDLWTPETYFKNSADGRLDKVIFPYHYMT 59
Query: 281 LYKDKTILYMVKFVFMAL 298
L + T+ +M V M L
Sbjct: 60 LDRSGTV-FMAARVSMKL 76
>gi|308483557|ref|XP_003103980.1| CRE-LGC-42 protein [Caenorhabditis remanei]
gi|308258637|gb|EFP02590.1| CRE-LGC-42 protein [Caenorhabditis remanei]
Length = 383
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 97/168 (57%), Gaps = 9/168 (5%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C ++ YP D Q C +++ S +H ++ W P P+ + +I+LP+ +
Sbjct: 104 RVTLNLACNLDLKDYPLDYQTCYIKVISYAHVKHEMNVTWFPNDPIRFNPEIDLPEFHIR 163
Query: 66 KNKTADCSQVY---------STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSF 116
C+ V+ G F+CL + LKR +G++L +YIPT LIV +SWVSF
Sbjct: 164 ALDKDYCNGVFLYTLTHNSSRVGEFSCLLGMLKLKRAIGFHLVQSYIPTALIVAISWVSF 223
Query: 117 WIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
WI A PARV+L T+LLTLSTQ + +LP VSY KA+D F C
Sbjct: 224 WIDRRAVPARVSLSFTTLLTLSTQGNGIRYALPAVSYAKAIDYFYGVC 271
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 196 PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMW 255
P V+F V L + MTY D++ +W+D +R N + + + D L +W
Sbjct: 10 PLQVHFGFYVESLGNFRATEMTYDMDMYLYMSWQDDTMR--HNGSEHVLVNDKDILDKIW 67
Query: 256 RPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
PD +F NA+ F +T+ N +++ T+ Y +
Sbjct: 68 LPDLYFANARTAYFHKVTVHNFNMFISPQGTVSYGTR 104
>gi|73973905|ref|XP_539039.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Canis
lupus familiaris]
Length = 490
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 196 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 255
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 256 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 315
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 316 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 353
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 93 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSMTF 150
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 151 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 202
>gi|260798384|ref|XP_002594180.1| hypothetical protein BRAFLDRAFT_117616 [Branchiostoma floridae]
gi|229279413|gb|EEN50191.1| hypothetical protein BRAFLDRAFT_117616 [Branchiostoma floridae]
Length = 486
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 102/164 (62%), Gaps = 1/164 (0%)
Query: 3 SEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQL 62
S + TLK SC M+F +YP D Q C +Q+ TTDDL+ +W E + + IELP+
Sbjct: 201 SSQKKTLKNSCPMDFRMYPFDAQFCKIQLGPYGMTTDDLVIEWK-EPAVETNPGIELPEY 259
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ C YS G F C + F L R +GYY+ TY+P+ LIV +SW++FWI P
Sbjct: 260 VIDGWTWTSCGGNYSIGEFGCNQATFKLVRSVGYYITQTYVPSALIVALSWLTFWISPLQ 319
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
APARV LG+T++LT +T + +++S+P SY++A+D +M CT+
Sbjct: 320 APARVALGITTVLTSTTLTSATRSSIPRFSYIRAIDIWMLVCTI 363
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 43/105 (40%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G V + V + SI E SM Y +F W D R R ++
Sbjct: 96 YDMRIRPNDQGPGVHVLMQMYVESIASISEISMDYVITFYFRMWWNDPRFRFTPTQPNQT 155
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
L V +W PD +F N K ++ + +W++ + IL
Sbjct: 156 AQLHVAARSLVWTPDVYFLNEKDAGYRASSAFTSLLWVWPNGDIL 200
>gi|194374555|dbj|BAG57173.1| unnamed protein product [Homo sapiens]
Length = 366
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 72 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 131
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 132 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 191
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT++T AS+P VSY+KAVD ++
Sbjct: 192 PARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYL 229
>gi|348543733|ref|XP_003459337.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Oreochromis niloticus]
Length = 480
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 103/158 (65%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ +C M+F +P D+Q CSL++ES ++T +DL+ W + L++D++I L Q +
Sbjct: 174 RVTVTAACNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKSGDESLSIDDRISLSQFLI 233
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 234 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 293
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 294 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 331
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 71 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFTSSTNKSMTF 128
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A
Sbjct: 129 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTA 179
>gi|396716|emb|CAA50492.1| gamma-aminobutyric acid-grated chloride-ion channel/receptor, zeta
subunit [Lymnaea stagnalis]
gi|448443|prf||1917212A GABA A Receptor:SUBUNIT=zeta
Length = 437
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 105/175 (60%), Gaps = 14/175 (8%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-----------DPE-MPLAV 53
RL++ LSC M+ + YP D Q C + + S ++ DL+ W +P+ + V
Sbjct: 159 RLSMTLSCPMDLINYPFDKQTCHILIMSFGYSDQDLVLDWMNLTTADDLTMNPDGKAIVV 218
Query: 54 DEKIELPQLQLVKNKTADCSQVY--STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIM 111
D ++ LPQ ++ + C++ Y GN +C++ F L R +G+Y+ YIP+ LIV++
Sbjct: 219 DSEVLLPQFEVKSVIPSFCNRRYHQKAGNHSCIQAEFHLARNIGFYIVQMYIPSMLIVML 278
Query: 112 SWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
SW+SFW+ + P RV+LG+ ++LT++TQ + A+LP VSY KA+D +MS C V
Sbjct: 279 SWISFWLTVNSVPGRVSLGLLTVLTMTTQSSSVNAALPRVSYTKAIDVWMSTCLV 333
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 14/128 (10%)
Query: 172 TFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDH 231
T++D L P YDK+ P + + ++Y V +D+++E SM + I W D
Sbjct: 41 TYDD-LKTAPPSYDKLEPARIQ---VLLY----VSSIDAVNEASMDFTVGILLHLRWTDT 92
Query: 232 RL--RLPENMTSEYRLLEVDW----LKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
R+ N+ + +L +D+ +K +W PD FF N K +F + N + LY+
Sbjct: 93 RIYHDKAHNLFLQSKLQSLDFDSENIKKVWVPDIFFPNEKKGSFHDIMTQNQMMRLYQGG 152
Query: 286 TILYMVKF 293
TILY+ +
Sbjct: 153 TILYISRL 160
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFEL---AAKENARLLTGQPMIPPN--H 347
FVF AL+E+ +VN++ + +F L KE+ L + +P + H
Sbjct: 334 FVFAALLEFAVVNVLSRKESI----SGFSLKNVFTLPKDTDKEDGPLNMAEMTVPLDGFH 389
Query: 348 Q---QAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFAE 390
+ Q ++ +R AI +D +RV FP+ F I +YW+ +
Sbjct: 390 EAEAQKKKRFNKRGIVYAIYVDMTARVVFPICFIIFIMSYWLYYVN 435
>gi|292624510|ref|XP_697486.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Danio
rerio]
Length = 464
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 102/158 (64%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ +C M+F +P DTQ C+L++ES ++T +DL+ W + L+ D+KI L Q +
Sbjct: 171 RVTVTSACNMDFSRFPLDTQTCTLELESYAYTDEDLMLYWKSGDESLSTDDKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 328
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENM 239
+D P G V V V LDSI E M + ++ WKD RL P ++M
Sbjct: 64 HDFTMRPAFAGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSKHNKSM 123
Query: 240 TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
T + RL +K +W PD FF ++K T N + +Y D +LY ++
Sbjct: 124 TFDGRL-----VKKIWVPDVFFVHSKRSFIHDTTTENIMIRVYPDGHVLYSLR 171
>gi|327261515|ref|XP_003215575.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-1-like [Anolis carolinensis]
Length = 479
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 103/166 (62%), Gaps = 2/166 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W + L DE+I L Q +
Sbjct: 192 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKNGNDSLKTDERISLSQFLI 251
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 252 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 311
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTVSST 169
PARV LG+T++LT+ST AS+P VSY+KAVD ++ VSS+
Sbjct: 312 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVSSS 357
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 89 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNQSMTF 146
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 147 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 198
>gi|260792000|ref|XP_002591015.1| hypothetical protein BRAFLDRAFT_69432 [Branchiostoma floridae]
gi|229276215|gb|EEN47026.1| hypothetical protein BRAFLDRAFT_69432 [Branchiostoma floridae]
Length = 488
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 186/392 (47%), Gaps = 44/392 (11%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T K C M+ YP D+Q CSL+ ES + TDD+IF W + + ++L Q +
Sbjct: 132 RITTKAECYMDLKKYPMDSQNCSLEFESYGYRTDDIIFHWKAGNSSVHGLDTLKLQQFIV 191
Query: 65 VKNKTADCS-QVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
D + + +G ++ +++ F+L R+ Y++F TYIP+ L+V++SWVSFWI PEA
Sbjct: 192 GGYYAHDGLLRDHESGVYSRIKLSFILHRQAFYFIFQTYIPSILLVVLSWVSFWINPEAV 251
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKL 183
PARV LG+T++LT++T + +QA +P +SY+KA+D ++ C + TF ++
Sbjct: 252 PARVALGITTVLTMTTLMSGAQAQMPKISYIKAIDVYLVMCFL----FTFFALVEYAAVN 307
Query: 184 Y--DKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTS 241
+ KM +K+ + + V L+ E T I + R RL +
Sbjct: 308 FVSSKMALKRKKQE------NKDVEKLECDCEECNTSQQGISLKR-LSSTRCRLDRGTSF 360
Query: 242 EYRLL-EVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALME 300
+ L+ + ++ SF +N A TFQ + + E
Sbjct: 361 QNNLVSSTSFDRSCSASTSFDRNCSAKTFQ-------------------------VDIDE 395
Query: 301 YCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARLLTGQPMIPPNHQQA-QRNLAQRA- 358
+N GDS + P K E+ + + + + P Q+ R L+ R
Sbjct: 396 TSPLNGPRGDSSVTSPSNETKPSSSREILEASDDYVTSSEANRPTRIQRCLSRGLSYRMP 455
Query: 359 RTR-AINIDRFSRVFFPVLFAILNCTYWIMFA 389
R + AI ID+++R FP FA LN Y+ ++
Sbjct: 456 RLKDAIIIDQYARFGFPFTFAALNIVYFTYYS 487
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 216 MTYAADIFFAQTWKDHRLRLPE-NMTS---EYRLLEVDWLKNMWRPDSFFKNAKAVTFQT 271
+ Y IF Q W+D R+ N+T+ + RL E N+W PD+F N+K
Sbjct: 29 LDYTITIFLRQYWQDGRMSFEGTNLTTLSLDGRLAE-----NLWLPDTFISNSKESFLHK 83
Query: 272 MTIPNHYVWLYKDKTILYMV 291
+T+ N + LY + TILY +
Sbjct: 84 VTVDNRLIQLYPNGTILYGI 103
>gi|440911380|gb|ELR61056.1| Gamma-aminobutyric acid receptor subunit rho-2 [Bos grunniens
mutus]
Length = 493
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 196 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 255
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 256 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 315
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 316 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 353
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 93 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSASNKSMTF 150
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 151 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAM 202
>gi|242021132|ref|XP_002431000.1| gamma-aminobutyric-acid receptor alpha-2 subunit precursor,
putative [Pediculus humanus corporis]
gi|212516224|gb|EEB18262.1| gamma-aminobutyric-acid receptor alpha-2 subunit precursor,
putative [Pediculus humanus corporis]
Length = 570
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 100/172 (58%), Gaps = 1/172 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T RLT+ SC M +P D Q+C L + S +T DLI++W E + + E +E+
Sbjct: 146 ITYSMRLTISASCPMYLRKFPLDLQKCPLVLGSYGYTDKDLIYKWTDEDAIGMQEGVEIA 205
Query: 61 QLQLVKNKTADCSQVYSTG-NFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIK 119
Q LV T + + G ++ ++ F LKR GY++ YIP LIV+ SW+SFWI
Sbjct: 206 QFDLVNVTTQKSTTMVKGGLPYSTIKADFWLKRHTGYFMLQVYIPCGLIVVCSWISFWID 265
Query: 120 PEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTVSSTSL 171
P+A PARV LGVT++L+L+T ++ +P VSY A+D F+ C S S+
Sbjct: 266 PDAVPARVNLGVTTVLSLTTLGFGGRSQMPKVSYWTALDWFVIICFTSVFSV 317
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%)
Query: 164 CTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIF 223
C + S+++T K YDK P G P + + + + + +N ++ D +
Sbjct: 23 CKLVSSNVTETLDFLLGSKRYDKRLRPGYGGPPITISVNFFIKSMGPVSDNDESFGLDCY 82
Query: 224 FAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYK 283
F Q W D RL+ + + + +L +W+PD++F N K +T+PN ++ L
Sbjct: 83 FRQHWYDWRLQYQKIPGLDEFSMSWLFLDRVWKPDTYFVNGKKSYLHRITVPNKFLRLRH 142
Query: 284 DKTILYMVKFVFMA 297
D I Y ++ A
Sbjct: 143 DGFITYSMRLTISA 156
>gi|113912067|gb|AAI22771.1| Gamma-aminobutyric acid (GABA) receptor, rho 2 [Bos taurus]
Length = 490
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 196 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 255
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 256 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 315
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 316 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 353
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 93 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSASNKSMTF 150
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 151 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAM 202
>gi|402867640|ref|XP_003897949.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 isoform 2
[Papio anubis]
Length = 465
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT++T AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYL 328
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 68 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
>gi|344264639|ref|XP_003404399.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Loxodonta africana]
Length = 491
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 197 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 256
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 257 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 316
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 317 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 354
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 94 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSMTF 151
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 152 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 203
>gi|109072025|ref|XP_001095576.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 isoform 2
[Macaca mulatta]
Length = 465
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT++T AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYL 328
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 68 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
>gi|2317700|gb|AAB66600.1| gamma-aminobutyric-acid receptor rho-2B subunit [Morone americana]
Length = 473
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 124/226 (54%), Gaps = 15/226 (6%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ +C M+F +P D+Q C+L++ES ++T +DL+ W + L+ D++I L Q +
Sbjct: 174 RVTVTAACNMDFSRFPLDSQTCTLELESYAYTDEDLMLYWKSGDESLSTDDRISLSQFLI 233
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 234 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 293
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVD---------AFMSACTVSSTSLTFN 174
PARV+LG+T++LT+ST AS+P VSY+KAVD F+S ++ +
Sbjct: 294 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTT 353
Query: 175 DILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSI----DENSM 216
+D KL +K+R + T H M LD D NS+
Sbjct: 354 VRDGKDRKLREKVREQSQTLPCTCGMSHARTMMLDGTYSEADANSL 399
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 190 PKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTSEYRL 245
P G V V V LDSI E M + ++ WKD RL P ++MT + RL
Sbjct: 73 PAFAGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSSTNKSMTFDGRL 132
Query: 246 LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+K +W PD FF ++K T N + ++ D +LY ++ A
Sbjct: 133 -----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTA 179
>gi|324508827|gb|ADY43724.1| Ligand-gated ion channel 50 [Ascaris suum]
Length = 501
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 100/161 (62%), Gaps = 1/161 (0%)
Query: 4 EYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQ 63
YR+++K C ++ +P DTQ C L ES SH ++++ +W E + + I+LP
Sbjct: 149 NYRMSVKAPCDLDLRTFPFDTQSCVLIFESYSHNSEEVTLKWMDE-AVTLMRPIQLPDFD 207
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
LV + + + +Y G + L+V+F KRR G+Y+ Y+PT L +I+SWVSF ++P+A
Sbjct: 208 LVLFRANNETMLYPNGYWDQLQVVFTFKRRYGFYILQAYVPTYLTIIVSWVSFCMEPKAL 267
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR T+GV+SLL L+ Q +LP VSY+KA+D +M C
Sbjct: 268 PARTTVGVSSLLALTFQFGNILKNLPRVSYIKAMDVWMLGC 308
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
Y KM P ++ V HV + S++E + + DI F+Q W D L +
Sbjct: 44 YTKMLPDAEDAVQVNVEIHV--QDISSLNEITSDFEIDILFSQLWHDSALSFVNYTACKR 101
Query: 244 RL-LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTI 287
+ +E ++ ++W P++ N+K + N LY++ T+
Sbjct: 102 NITMESRYINSIWTPNTCLINSKRTMIHSSPTANIMFILYENGTV 146
>gi|403261128|ref|XP_003922982.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Saimiri
boliviensis boliviensis]
Length = 465
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT++T AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYL 328
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 68 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSATNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
>gi|406035350|ref|NP_002034.3| gamma-aminobutyric acid receptor subunit rho-2 precursor [Homo
sapiens]
gi|410516956|sp|P28476.5|GBRR2_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit rho-2;
AltName: Full=GABA(A) receptor subunit rho-2; AltName:
Full=GABA(C) receptor; Flags: Precursor
gi|123093748|gb|AAI30355.1| Gamma-aminobutyric acid (GABA) receptor, rho 2 [Homo sapiens]
gi|123093914|gb|AAI30353.1| Gamma-aminobutyric acid (GABA) receptor, rho 2 [Homo sapiens]
gi|313883414|gb|ADR83193.1| Unknown protein [synthetic construct]
Length = 465
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT++T AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYL 328
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 68 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
>gi|426234694|ref|XP_004011327.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Ovis
aries]
Length = 489
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 195 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 254
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 255 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 314
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 315 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 352
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 92 MRP--AFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSASNKSMTF 149
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 150 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAM 201
>gi|296198773|ref|XP_002746862.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2
[Callithrix jacchus]
Length = 490
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 196 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 255
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 256 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 315
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT++T AS+P VSY+KAVD ++
Sbjct: 316 PARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYL 353
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 93 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTF 150
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 151 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 202
>gi|119568942|gb|EAW48557.1| gamma-aminobutyric acid (GABA) receptor, rho 2 [Homo sapiens]
Length = 465
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT++T AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYL 328
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 68 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
>gi|355561902|gb|EHH18534.1| hypothetical protein EGK_15160 [Macaca mulatta]
Length = 490
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 196 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 255
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 256 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 315
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT++T AS+P VSY+KAVD ++
Sbjct: 316 PARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYL 353
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 93 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTF 150
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 151 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 202
>gi|297291324|ref|XP_001095465.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 isoform 1
[Macaca mulatta]
Length = 490
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 196 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 255
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 256 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 315
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT++T AS+P VSY+KAVD ++
Sbjct: 316 PARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYL 353
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 93 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTF 150
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 151 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 202
>gi|402867638|ref|XP_003897948.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 isoform 1
[Papio anubis]
Length = 490
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 196 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 255
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 256 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 315
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT++T AS+P VSY+KAVD ++
Sbjct: 316 PARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYL 353
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 93 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTF 150
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 151 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 202
>gi|348563381|ref|XP_003467486.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Cavia porcellus]
Length = 488
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 196 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 255
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L R + ++L TY P L+V++SWVSFWI +A
Sbjct: 256 QKFHTTSRLAFYSSTGWYNRLYINFTLHRHIFFFLLQTYFPATLMVMLSWVSFWIDHKAV 315
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 316 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 353
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 93 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSMTF 150
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 151 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAM 202
>gi|397504702|ref|XP_003822922.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Pan
paniscus]
Length = 490
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 196 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 255
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 256 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 315
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT++T AS+P VSY+KAVD ++
Sbjct: 316 PARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYL 353
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 93 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTF 150
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 151 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 202
>gi|332824532|ref|XP_527448.3| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Pan
troglodytes]
Length = 490
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 196 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 255
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 256 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 315
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT++T AS+P VSY+KAVD ++
Sbjct: 316 PARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYL 353
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 93 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTF 150
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 151 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 202
>gi|351715095|gb|EHB18014.1| Gamma-aminobutyric acid receptor subunit rho-2 [Heterocephalus
glaber]
Length = 491
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 197 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 256
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L R + ++L TY P L+V++SWVSFWI +A
Sbjct: 257 QKFHTTSRLAFYSSTGWYNRLYINFTLHRHIFFFLLQTYFPATLMVMLSWVSFWIDHKAV 316
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 317 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 354
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 94 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSTSNKSMTF 151
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL+ K +W PD FF ++K T N + L+ D +LY ++ A+
Sbjct: 152 DGRLV-----KKIWVPDVFFVHSKRSFIHDTTTDNIMLRLFPDGHVLYSMRITVTAM 203
>gi|291224455|ref|XP_002732219.1| PREDICTED: Gamma-aminobutyric acid receptor subunit alpha-6-like
[Saccoglossus kowalevskii]
Length = 456
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 95/160 (59%), Gaps = 2/160 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT+ C M+F YP D Q C LQ S S +TDD+I+ W P+ + V + L Q +
Sbjct: 166 RLTIVAECKMHFEKYPMDGQMCPLQFGSNSFSTDDIIYDWHPD-KVEVSPDLRLSQFEFT 224
Query: 66 KNKTADCS-QVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
T + G+ + L F L+RRLGY++ Y+P LI ++SWVSFW+ PEA P
Sbjct: 225 HQDTEKIRLKSDRIGDRSVLVARFYLQRRLGYFMIQIYVPCILITVLSWVSFWLNPEATP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LGV ++LT++T + SLP VSY KA+D +++ C
Sbjct: 285 ARVALGVMTILTITTLGWSIRDSLPKVSYGKALDWYLALC 324
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G+P V + + + + E M Y D+FF Q W D RL + S Y
Sbjct: 59 YDKSLRPGAGGRPVNVQADMYALSIGPVVEIDMEYHLDVFFRQRWTDPRL---AHRDSHY 115
Query: 244 RLLEVD--WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+L ++ L+++W PD++F N K ++T PN + + T+LY + +A
Sbjct: 116 DILSLNTVMLESIWYPDTYFHNGKKSYDHSITTPNRLFRIGPNGTVLYTQRLTIVA 171
>gi|17540850|ref|NP_501715.1| Protein ACC-1 [Caenorhabditis elegans]
gi|14530463|emb|CAA92466.2| Protein ACC-1 [Caenorhabditis elegans]
Length = 466
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 94/159 (59%)
Query: 3 SEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQL 62
+ YR+ L C M +P D Q+C L ES ++ T ++ QW+ P+ + ++IELP
Sbjct: 148 TNYRMKLTGPCDMKLKRFPFDKQKCYLTFESFNYNTGEVRMQWNQPYPVILLKRIELPDF 207
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+LV Q+Y G + L V FV +RR G+Y+ YIPT + +++SW+SF++ P A
Sbjct: 208 KLVNFSVIAVEQMYPAGWWDELTVAFVFERRYGWYVLQGYIPTMVTIVISWISFYLGPRA 267
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PAR LGV SLL ++ Q +LP VSY+KA+D +M
Sbjct: 268 IPARTMLGVNSLLAMTFQFGNIIRNLPRVSYVKAIDVWM 306
>gi|432936634|ref|XP_004082203.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
isoform 2 [Oryzias latipes]
Length = 481
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 102/158 (64%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ +C M+F +P D+Q CSL++ES ++T +DL+ W + L+ D++I L Q +
Sbjct: 174 RVTVTAACNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKSGDESLSTDDRISLSQFLI 233
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 234 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 293
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 294 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 331
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 71 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFSSSTNKSMTF 128
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A
Sbjct: 129 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTA 179
>gi|1042020|gb|AAB34926.1| GABAC rho 2=gamma-aminobutyric acid type C receptor rho 2 subunit
{membrane-spanning domains M1-M3} [chickens, embryonic
day 18, brains, Peptide Partial, 299 aa]
Length = 299
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + L DEKI L Q +
Sbjct: 34 RITVTAMCNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKNGNESLKTDEKISLSQFLI 93
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 94 QKFHTTSRLAFYSSTGWYNRLYISFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 153
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 154 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 191
>gi|432936632|ref|XP_004082202.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
isoform 1 [Oryzias latipes]
Length = 479
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 102/158 (64%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ +C M+F +P D+Q CSL++ES ++T +DL+ W + L+ D++I L Q +
Sbjct: 174 RVTVTAACNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKSGDESLSTDDRISLSQFLI 233
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 234 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 293
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 294 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 331
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 71 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFSSSTNKSMTF 128
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A
Sbjct: 129 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTA 179
>gi|426353982|ref|XP_004044451.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-2 [Gorilla gorilla gorilla]
Length = 499
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 196 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 255
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 256 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 315
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT++T AS+P VSY+KAVD ++
Sbjct: 316 PARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYL 353
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 93 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTF 150
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 151 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 202
>gi|332218471|ref|XP_003258378.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Nomascus
leucogenys]
Length = 490
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 196 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 255
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 256 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAV 315
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT++T AS+P VSY+KAVD ++
Sbjct: 316 PARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYL 353
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 93 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTF 150
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 151 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTSDNIMLRVFPDGHVLYSMRITVTAM 202
>gi|395534598|ref|XP_003769327.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2
[Sarcophilus harrisii]
Length = 464
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 HKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG T++LT+ST AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGSTTVLTMSTIITGVNASMPRVSYIKAVDIYL 328
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 68 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTTNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
>gi|126310601|ref|XP_001376559.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2
[Monodelphis domestica]
Length = 464
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 HKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG T++LT+ST AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGSTTVLTMSTIITGVNASMPRVSYIKAVDIYL 328
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 68 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTTNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
>gi|260593686|ref|NP_001159533.1| glycine receptor subunit beta isoform B precursor [Homo sapiens]
gi|332217583|ref|XP_003257938.1| PREDICTED: glycine receptor subunit beta isoform 2 [Nomascus
leucogenys]
gi|332820487|ref|XP_003310588.1| PREDICTED: glycine receptor subunit beta [Pan troglodytes]
gi|426345838|ref|XP_004040605.1| PREDICTED: glycine receptor subunit beta isoform 2 [Gorilla gorilla
gorilla]
gi|410215404|gb|JAA04921.1| glycine receptor, beta [Pan troglodytes]
gi|410341935|gb|JAA39914.1| glycine receptor, beta [Pan troglodytes]
Length = 303
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 89/128 (69%), Gaps = 4/128 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLG 130
+ ARV LG
Sbjct: 295 SAARVPLG 302
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TIL 288
+L
Sbjct: 170 DVL 172
>gi|47215100|emb|CAF98174.1| unnamed protein product [Tetraodon nigroviridis]
Length = 445
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 103/158 (65%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ +C M+F +P D+Q C+L++ES ++T +DL+ W + L++D++I L Q +
Sbjct: 139 RVTVTAACNMDFSRFPLDSQTCTLELESYAYTDEDLMLYWKSGDDSLSIDDRISLSQFLI 198
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 199 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 258
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 259 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 296
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRL----PENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 36 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFRSSTNKSMTF 93
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A
Sbjct: 94 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTA 144
>gi|443702214|gb|ELU00365.1| hypothetical protein CAPTEDRAFT_214507 [Capitella teleta]
Length = 216
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 93/153 (60%), Gaps = 6/153 (3%)
Query: 43 FQWDPEM-PLAVDEKIELPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHT 101
F+W + + ++ I+ PQ LV C + Y TGNFTCL +F L R GYY+
Sbjct: 3 FEWRSDKDAVQINPHIQFPQFDLVDKNVTYCQKSYITGNFTCLRAVFHLHRHFGYYMIQN 62
Query: 102 YIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
YIP+ LIV++SWVSFWI +A PAR+TLGV ++LT++TQ SLP VSY+KA+D +M
Sbjct: 63 YIPSGLIVVLSWVSFWISTDAVPARITLGVLTVLTMTTQCVGIWMSLPMVSYIKAIDIWM 122
Query: 162 SACTVSS--TSLTF---NDILPEDPKLYDKMRP 189
S C +S L F N + ++ + KMRP
Sbjct: 123 STCVMSVFFAMLEFAVVNTMSRKEARDMAKMRP 155
>gi|156377029|ref|XP_001630660.1| predicted protein [Nematostella vectensis]
gi|156217685|gb|EDO38597.1| predicted protein [Nematostella vectensis]
Length = 286
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 95/161 (59%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+T LSC MNF +P D Q+C Q S HT DD++ + L + +++E+ Q +
Sbjct: 102 RITTTLSCQMNFRRFPMDVQKCHFQTGSYGHTEDDIVIRCRGGKGLIISDEVEISQYSIT 161
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ + D VY+TG F+ VLKRRL YY++ Y+P L+V +SW+SFWI P + PA
Sbjct: 162 EVTSRDFKGVYNTGVFSEPIATIVLKRRLMYYVYGYYLPAGLVVFLSWISFWIDPRSVPA 221
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV+LGV ++L + + + P VSY A+D ++ +C V
Sbjct: 222 RVSLGVITILAMGSFLHGGKG--PSVSYATALDVYIISCYV 260
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL-RLPE--NMTSEYRLLEVDW 250
G P IV V + +IDE M ++ DIFF Q W++ RL LP+ + + +L
Sbjct: 1 GGPVIVDVEAYVASIGAIDEKKMEFSVDIFFRQRWREERLCYLPQAGKGSGQRLILNPVL 60
Query: 251 LKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
LKN WRPD F KN+K F + N + D IL
Sbjct: 61 LKNTWRPDVFIKNSKEARFHEVPSDNVMYGISPDGNIL 98
>gi|4336684|gb|AAD17893.1| gamma-aminobutyric-acid receptor rho-2A subunit precursor [Morone
americana]
Length = 479
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 102/158 (64%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ +C M+F +P D+Q CSL++ES ++T +DL+ W + L+ D++I L Q +
Sbjct: 174 RVTVTAACNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKSGDESLSTDDRISLSQFLI 233
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 234 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 293
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 294 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 331
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 71 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFTSSTNKSMTF 128
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A
Sbjct: 129 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTA 179
>gi|156391797|ref|XP_001635736.1| predicted protein [Nematostella vectensis]
gi|156222833|gb|EDO43673.1| predicted protein [Nematostella vectensis]
Length = 275
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 94/156 (60%), Gaps = 1/156 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDE-KIELPQLQL 64
RLTL C MN + YP D Q C+L + S + +T ++ + WD A+D + + L
Sbjct: 120 RLTLTAGCEMNLLDYPLDEQTCNLTILSYAFSTHEMDYIWDGGTKSAIDVINDAMNEFTL 179
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ T+ Y TG +T LE F KRRLGY + Y PT LIV +SW+SFWI EAAP
Sbjct: 180 IGINTSKQVFRYVTGPWTHLEATFKFKRRLGYSIIQVYAPTILIVALSWLSFWISKEAAP 239
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAF 160
ARV LG+T++LT+ T +A++P VSY+KA+D F
Sbjct: 240 ARVALGITTVLTIVTLMGSFRAAVPKVSYVKAIDLF 275
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 184 YDK-MRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKD----HRLRLPEN 238
YD+ +RP ++ G+ V +TV+ I E M ++ DIFF Q W D H L+ P
Sbjct: 14 YDRRLRPHRQTGRLINVTIGMTVVSFGQIRERDMDFSLDIFFYQKWSDPRLKHSLKDPII 73
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ E++ L +W PD+FF N K F T+ N + +++D T+ Y + A
Sbjct: 74 LGGEFKKL-------VWLPDTFFLNIKTAKFHTVPSDNSKISIFEDGTVRYSTRLTLTAG 126
Query: 299 MEYCLVN 305
E L++
Sbjct: 127 CEMNLLD 133
>gi|306448455|gb|ADM88010.1| ionotropic GABA-aminobutyric acid receptor RDL3-3a6a [Bombyx mori]
Length = 489
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 104/167 (62%), Gaps = 1/167 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIEL 59
+T RLT+ SC MN +P D Q C +++ES +T D+++ W D + + +++L
Sbjct: 152 ITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIVYVWKDGASSVGMSSEVQL 211
Query: 60 PQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIK 119
PQ +++ ++ STGN++ L R +GYYL YIP+ LIVI+SWVSFW+
Sbjct: 212 PQFRVLGHRQRATVVTLSTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLN 271
Query: 120 PEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A PARV LGVT++LT++T + + A+LP +SY+K++D ++ C V
Sbjct: 272 RNATPARVQLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 318
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + V+ + S+ E M + D +F Q W D RL + E
Sbjct: 49 YDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDPRLAYKKRPGVET 108
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +++KN+W PD+FF N K F T N ++ ++ +I ++ A
Sbjct: 109 LSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITA 162
>gi|390340438|ref|XP_783809.3| PREDICTED: gamma-aminobutyric acid receptor subunit beta-1-like
[Strongylocentrotus purpuratus]
Length = 509
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 102/165 (61%), Gaps = 1/165 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIEL 59
+T R+T SC M+ + YP D Q CSL++ES +TT D+ F W + L IE+
Sbjct: 162 ITYGMRITSVASCYMDLVHYPMDEQNCSLEIESYGYTTADVNFVWQYGDDSLEGVNNIEM 221
Query: 60 PQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIK 119
Q L K Q +STG++ L + F +KR +G++ TY+P+ L+V++SWVSFWI
Sbjct: 222 AQFTLSDYKLIVKMQNFSTGSYPRLALTFRIKRNVGFFFLQTYLPSILLVMLSWVSFWIN 281
Query: 120 PEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
EA ARV+LG+T++LT++T + SLP +SY+K++D ++ C
Sbjct: 282 HEATSARVSLGITTVLTMTTISTAVRQSLPRISYVKSIDIYVITC 326
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 218 YAADIFFAQTWKDHRLRLP---ENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y ++F Q WKD RL N++ L E +W PD++F N K +T+
Sbjct: 95 YTLTMYFRQHWKDERLSYDPCLGNVSLSGILAE-----RIWVPDTYFPNDKRSFVHDVTV 149
Query: 275 PNHYVWLYKDKTILYMVKFVFMA 297
N + + D TI Y ++ +A
Sbjct: 150 TNKLLRFHHDGTITYGMRITSVA 172
>gi|306448459|gb|ADM88012.1| ionotropic GABA-aminobutyric acid receptor BRL3-3b6a [Bombyx mori]
Length = 489
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 104/167 (62%), Gaps = 1/167 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIEL 59
+T RLT+ SC MN +P D Q C +++ES +T D+++ W D + + +++L
Sbjct: 152 ITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIVYVWKDGASSVGMSSEVQL 211
Query: 60 PQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIK 119
PQ +++ ++ STGN++ L R +GYYL YIP+ LIVI+SWVSFW+
Sbjct: 212 PQFRVLGHRQRATVVTLSTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLN 271
Query: 120 PEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A PARV LGVT++LT++T + + A+LP +SY+K++D ++ C V
Sbjct: 272 RNATPARVQLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 318
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + V+ + S+ E M + D +F Q W D RL + E
Sbjct: 49 YDKRVRPNYGGPPVEVGITMYVLSISSLSEVHMDFTLDFYFRQFWTDPRLAYKKRPGVET 108
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +++KN+W PD+FF N K F T N ++ ++ +I ++ A
Sbjct: 109 LSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITA 162
>gi|301774576|ref|XP_002922712.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like,
partial [Ailuropoda melanoleuca]
Length = 492
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEK+ L Q +
Sbjct: 198 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLRTDEKVSLSQFLI 257
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 258 QEFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 317
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 318 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 355
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 95 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSMTF 152
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + +Y D +LY ++ A+
Sbjct: 153 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVYPDGHVLYSMRITVTAM 204
>gi|1042019|gb|AAB34925.1| GABAC rho 1=gamma-aminobutyric acid type C receptor rho 1 subunit
{membrane-spanning domains M1-M3} [chickens, embryonic
day 18, brain, Peptide Partial, 292 aa]
Length = 292
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W + L DE+I L Q +
Sbjct: 34 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKNGNDSLKTDERISLSQFLI 93
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 94 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 153
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 154 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 191
>gi|405957409|gb|EKC23621.1| Gamma-aminobutyric acid receptor subunit beta [Crassostrea gigas]
Length = 748
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 99/161 (61%), Gaps = 1/161 (0%)
Query: 7 LTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQLV 65
T L+C M+ YP D Q C++++ES + DL W + + IELPQ +V
Sbjct: 427 FTTTLACMMDLHNYPLDEQNCTVEIESYGYDMADLYLHWRSGHHSVHGIQDIELPQFSIV 486
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+ +T + + TG + L + F L R +GY++F TY+P+ LIV++SWVSFWI EA A
Sbjct: 487 EYRTVEKIESLLTGKYPRLSLSFKLHRNVGYFIFQTYLPSILIVMLSWVSFWINHEATSA 546
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 547 RVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLVTCFV 587
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 41/101 (40%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P V + V D+I E +M Y I+ Q W D RL TS
Sbjct: 325 YDIRLRPNFGDAAVDVGIELVVASFDTISEVNMDYTITIYLNQYWTDERLTHGNLSTSTS 384
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKD 284
L D+ +W PD+FF N K +T N + L+ +
Sbjct: 385 LTLTGDFADKIWVPDTFFANDKNSFLHDVTEKNKMIRLHGN 425
>gi|170050253|ref|XP_001859955.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167871922|gb|EDS35305.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 330
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 84/128 (65%)
Query: 37 TTDDLIFQWDPEMPLAVDEKIELPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGY 96
TT DL+F W P+ V + + LP+ L K T C+ +TG ++CL+V + KR Y
Sbjct: 66 TTADLVFLWKEGDPVQVVKNLHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSY 125
Query: 97 YLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKA 156
YL YIP C++VI+SWVSFW+ A PARV+LGVT+LLT++TQ + ASLPPVSY KA
Sbjct: 126 YLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGINASLPPVSYTKA 185
Query: 157 VDAFMSAC 164
+D + C
Sbjct: 186 IDVWTGVC 193
>gi|156395846|ref|XP_001637321.1| predicted protein [Nematostella vectensis]
gi|156224432|gb|EDO45258.1| predicted protein [Nematostella vectensis]
Length = 262
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 98/162 (60%), Gaps = 6/162 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DP----EMPLAVDEKIEL 59
R+T+ SC M YP DTQ CS+ ES DDL+ W DP + + + + + +
Sbjct: 72 RMTVVASCMMYLRNYPMDTQSCSISFESYGMNNDDLLLSWKADPGDKYKNAVIISDNLTM 131
Query: 60 PQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIK 119
Q L + + + Y TG FT L++ F ++R+ YY+ TYIPT LIVI+SWVSFWI
Sbjct: 132 SQFALDEYHASKETFTYPTGTFTLLKLTFSIRRKKFYYVVQTYIPTILIVILSWVSFWIP 191
Query: 120 PEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
+ PARV LG+T++L L+T Q+S+P VSY+KA+D F+
Sbjct: 192 RSSPPARVALGITTVLALTTLIFGIQSSMPRVSYVKAIDWFL 233
>gi|156397121|ref|XP_001637740.1| predicted protein [Nematostella vectensis]
gi|156224855|gb|EDO45677.1| predicted protein [Nematostella vectensis]
Length = 303
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 115/191 (60%), Gaps = 6/191 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+TL SCAM+F +P D Q C + S +TT D+++QW D + A D+ E+ Q L
Sbjct: 100 RVTLSCSCAMDFRKFPMDKQNCGISFASYGYTTADIVYQWADERVTWAHDQ--EIAQFVL 157
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
K +T + ++ Y TG+F+ L + L RRLG+YL Y+P LIV++SW+SF++ +AP
Sbjct: 158 EKIETENLTRRYITGDFSALGIRLRLNRRLGHYLTRVYVPAVLIVMLSWLSFYLDRHSAP 217
Query: 125 ARVTLGVTSLLTLSTQH-AKSQASLPPVSYLKAVD--AFMSACTVSSTSLTFNDILPEDP 181
ARV+LG+T++LT++T Q SLP VSY+KA+D F+S C V + I D
Sbjct: 218 ARVSLGITTVLTMTTLLIGIGQGSLPVVSYVKALDWYLFVSYCMVFGAFAEYAVINHRDK 277
Query: 182 KLYDKMRPPKK 192
+ K+R +
Sbjct: 278 SYFLKLRRRSR 288
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 196 PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP---ENMTSEYRLLEVDWLK 252
P +V + ++ + E M + A+++F Q W D RL N T L D
Sbjct: 1 PVLVTTELNLVSISQFREADMEFTAEMYFRQAWHDPRLAFGVTMGNSTVPVITLYGDLSD 60
Query: 253 NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
++W+PD++F+N +TI N Y+ +Y D ++
Sbjct: 61 SLWQPDTYFENEVQGKIHELTIKNKYMRVYSDGRVM 96
>gi|74137499|dbj|BAE35793.1| unnamed protein product [Mus musculus]
Length = 362
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 72 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 131
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 132 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAV 191
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+ ++LT+ST AS+P VSY++AVD ++
Sbjct: 192 PARVSLGIMTVLTMSTIITGVNASMPRVSYIRAVDIYL 229
>gi|2565319|gb|AAB81966.1| gamma-aminobutyric acid receptor subunit [Lucilia cuprina]
Length = 550
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 106/168 (63%), Gaps = 3/168 (1%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP--LAVDEKIE 58
+T RLT+ SC MN +P D Q C +++ES +T D+ ++W+ E P + V ++
Sbjct: 171 ITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGPNSVGVSNEVS 229
Query: 59 LPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWI 118
LPQ +++ ++ +TGN++ L R +GYYL YIP+ LIV++SWVSFW+
Sbjct: 230 LPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWL 289
Query: 119 KPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A PARV LGVT++LT++T + + A+LP +SY+K++D ++ AC V
Sbjct: 290 NRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGACFV 337
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + V+ + S+ E M + D +F Q D RL + E
Sbjct: 68 YDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFRTDPRLAYRKRPGVET 127
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +++KN+W PD+FF N K F T N ++ ++ +I ++ A
Sbjct: 128 LSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITA 181
>gi|326916211|ref|XP_003204403.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like,
partial [Meleagris gallopavo]
Length = 437
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W + L DE+I L Q +
Sbjct: 151 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKNGNDSLKTDERISLSQFLI 210
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 211 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 270
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 271 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 308
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 48 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNQSMTF 105
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 106 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 157
>gi|432947228|ref|XP_004083955.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2-like
[Oryzias latipes]
Length = 473
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 102/158 (64%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ +C M+F +P D+Q C+L++ES ++T +DL+ W + L+ D++I L Q +
Sbjct: 174 RVTVTAACNMDFSRFPLDSQTCTLELESYAYTDEDLMLYWKSGDESLSTDDRISLSQFLI 233
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 234 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 293
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 294 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 331
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 190 PKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTSEYRL 245
P G V V V LDSI E M + ++ WKD RL P ++MT + RL
Sbjct: 73 PAFAGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSATNKSMTFDGRL 132
Query: 246 LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+K +W PD FF ++K T N + ++ D +LY ++ A
Sbjct: 133 -----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTA 179
>gi|397504698|ref|XP_003822920.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Pan paniscus]
gi|397504700|ref|XP_003822921.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Pan paniscus]
Length = 392
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 104 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 163
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 164 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 223
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 224 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDVYL 261
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 1 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 58
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 59 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 110
>gi|348537180|ref|XP_003456073.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2
[Oreochromis niloticus]
Length = 473
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 102/158 (64%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ +C M+F +P D+Q C+L++ES ++T +DL+ W + L+ D++I L Q +
Sbjct: 174 RVTVTAACNMDFSRFPLDSQTCTLELESYAYTDEDLMLYWKSGDESLSTDDRISLSQFLI 233
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 234 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 293
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 294 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 331
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 190 PKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTSEYRL 245
P G V V V LDSI E M + ++ WKD RL P ++MT + RL
Sbjct: 73 PAFAGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSATNKSMTFDGRL 132
Query: 246 LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+K +W PD FF ++K T N + ++ D +LY ++ A
Sbjct: 133 -----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSLRVTVTA 179
>gi|281344248|gb|EFB19832.1| hypothetical protein PANDA_011707 [Ailuropoda melanoleuca]
Length = 493
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEK+ L Q +
Sbjct: 192 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLRTDEKVSLSQFLI 251
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 252 QEFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 311
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 312 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 349
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 89 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSMTF 146
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + +Y D +LY ++ A+
Sbjct: 147 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVYPDGHVLYSMRITVTAM 198
>gi|427787619|gb|JAA59261.1| Putative glycine receptor alpha 3 [Rhipicephalus pulchellus]
Length = 469
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 105/161 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL+L+C M+F +P DTQ C + + + T + W P+ ++ IE+P+ LV
Sbjct: 210 RLTLRLACFMSFRHFPLDTQRCHILLGPYAQTIEQTAISWQDTDPIVLERPIEIPEFDLV 269
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N ++ TG F+ L F L+R+ GY+L TY+PT LIV++SWVSFW+ +A PA
Sbjct: 270 HNSYGHYNRAIDTGVFSFLNATFTLERQNGYHLIQTYLPTFLIVMISWVSFWLNVDATPA 329
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
RVTLGVT+LLT++T + + LPPVSY+KA+D ++ AC+V
Sbjct: 330 RVTLGVTTLLTMTTVASGVRTQLPPVSYIKAIDVWIGACSV 370
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACT---VSSTSLTFNDIL 177
EA + G +S + LS+ +S + P S A A V + L F D +
Sbjct: 39 EAGSSTGVAGSSSEVYLSSVERESDS--PATSDAPATSAETPGGDDPLVPAPRLAFLDKM 96
Query: 178 PEDPKLYDKMR-PPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
E YDK P G PT V ++ V + ++ N+M Y DI+ Q+W+D RL +
Sbjct: 97 LEQ---YDKRAWPTYGMGHPTYVKVNIYVNSIGPVNANNMEYGMDIYLRQSWQDLRLNVS 153
Query: 237 E-NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFV- 294
+ + S + D + +W+PD FF+N K +F +T+PN V L D +L+ ++
Sbjct: 154 KYGVNSTVTINGEDIMGKIWKPDLFFRNVKEASFHYVTVPNKLVKLGPDGEVLFSMRLTL 213
Query: 295 ----FMALMEYCL----VNIVLG 309
FM+ + L +I+LG
Sbjct: 214 RLACFMSFRHFPLDTQRCHILLG 236
>gi|410970262|ref|XP_003991605.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-3 [Felis
catus]
Length = 468
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T +DL+ W L DE I L Q +
Sbjct: 177 RITVSAMCFMDFSRFPLDTQNCSLELESYAYTEEDLMLYWKHGNKSLNTDEHISLSQFFV 236
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ + YS TG + L + FVL+R + +++ TY P L+V++SWVSFWI A
Sbjct: 237 EEFSASSGFAFYSSTGWYNRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAV 296
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST + AS+P VSY+KAVD ++
Sbjct: 297 PARVSLGITTVLTMSTIISGMSASMPQVSYIKAVDVYL 334
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENM 239
+D P G P V V + LDSI E +M + + WKD RL P ++M
Sbjct: 70 HDFAMRPGFGGSPVPVGIDVQIESLDSISEVNMDFTMTFYLRHYWKDERLSFPSTTNKSM 129
Query: 240 TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
T ++RL +K +W PD FF ++K T+ N + +Y D +L+ ++ A+
Sbjct: 130 TFDHRL-----IKKIWVPDIFFVHSKRSFIHDTTVENIMLRVYPDGNVLFSLRITVSAM 183
>gi|449265555|gb|EMC76735.1| Gamma-aminobutyric acid receptor subunit rho-1 [Columba livia]
Length = 472
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W + L DE+I L Q +
Sbjct: 186 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKNGNDSLKTDERISLSQFLI 245
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 246 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 305
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 306 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 343
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 83 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNQSMTF 140
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 141 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 192
>gi|156386931|ref|XP_001634164.1| predicted protein [Nematostella vectensis]
gi|156221244|gb|EDO42101.1| predicted protein [Nematostella vectensis]
Length = 270
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 93/160 (58%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIELPQLQL 64
++T+ C M+ +P DTQ C LQ ES HT +++ +W+ + P+A+ + + LP +
Sbjct: 101 KITVTAECQMDLRKFPMDTQVCVLQFESFFHTAAEIVLRWEEGDTPVAISKDMNLPHFDI 160
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V +T VY +G F LEV +RRLGYYL TY+P + +SW+ FW+ P
Sbjct: 161 VGLETKQIYNVYKSGKFNSLEVHITFRRRLGYYLIQTYLPCVFLCFLSWMPFWMDPSETG 220
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
R+ +G+T++LT+ ++P VSY+KA+D ++ AC
Sbjct: 221 DRLAVGITAVLTIVFLAGAMNTNMPKVSYMKAIDWYVIAC 260
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMT--SEYRLLEVDWL 251
GQP + ++ + + + E +M Y F Q W+D RL ++T + ++++
Sbjct: 1 GQPVNITVNMRINSVFDVREEAMDYTMRFAFRQKWRDPRLTYNISLTRGQGHPYIQLETA 60
Query: 252 KNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTI 287
+W PD+FF NA+ +T N + L+ D +I
Sbjct: 61 DLIWYPDTFFMNARKSYIHDVTKKNLGIRLFPDGSI 96
>gi|301628129|ref|XP_002943212.1| PREDICTED: gamma-aminobutyric acid receptor subunit theta-like
[Xenopus (Silurana) tropicalis]
Length = 662
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W + L D++I L Q +
Sbjct: 72 RVTVTAMCNMDFSRFPLDTQSCSLEIESYAYTEDDLMLYWKNGNESLKTDDRISLSQFLI 131
Query: 65 VK-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ + T + STG + L + F L+R + ++L TY P L+V++SWVSFWI AA
Sbjct: 132 QEFHTTTRLASYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAA 191
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 192 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 229
>gi|118088822|ref|XP_426190.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Gallus
gallus]
Length = 478
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W + L DE+I L Q +
Sbjct: 192 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKNGNDSLKTDERISLSQFLI 251
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 252 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 311
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 312 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 349
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 89 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNQSMTF 146
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 147 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 198
>gi|449497856|ref|XP_004174280.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-2 [Taeniopygia guttata]
Length = 464
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + L DEK L Q +
Sbjct: 171 RVTVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGNESLKTDEKNSLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPASLMVMLSWVSFWIDRRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 328
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 68 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRVTVTAM 177
>gi|224048437|ref|XP_002198040.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1
[Taeniopygia guttata]
Length = 478
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W + L DE+I L Q +
Sbjct: 192 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKNGNDSLKTDERISLSQFLI 251
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 252 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 311
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 312 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 349
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 89 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNQSMTF 146
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 147 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 198
>gi|8393403|ref|NP_058988.1| gamma-aminobutyric acid receptor subunit rho-2 precursor [Rattus
norvegicus]
gi|410516947|sp|P47742.3|GBRR2_RAT RecName: Full=Gamma-aminobutyric acid receptor subunit rho-2;
AltName: Full=GABA(A) receptor subunit rho-2; AltName:
Full=GABA(C) receptor; Flags: Precursor
gi|559373|dbj|BAA07506.1| GABA-A receptor rho-2 subunit [Rattus norvegicus]
Length = 465
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+ ++LT+ST AS+P VSY++AVD ++
Sbjct: 291 PARVSLGIMTVLTMSTIITGVNASMPRVSYIRAVDIYL 328
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ W+D RL P +MT
Sbjct: 68 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSNRSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
>gi|339233056|ref|XP_003381645.1| gamma-aminobutyric acid receptor subunit beta [Trichinella
spiralis]
gi|316979509|gb|EFV62301.1| gamma-aminobutyric acid receptor subunit beta [Trichinella
spiralis]
Length = 745
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 109/166 (65%), Gaps = 2/166 (1%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+TS+ RLT+ SC M ++P D+QEC+L++ES ++ D ++W + +DE + LP
Sbjct: 115 LTSQ-RLTVTASCPMLLHLFPLDSQECTLEIESYGYSEADTKYRWLENKTVTMDE-VFLP 172
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q + + + STGN++ L V FV R +G+Y+ YIP+ LIVI+SWVSFWI
Sbjct: 173 QFYVAHFTMKNRTITLSTGNYSRLHVKFVFVRNIGFYMMQIYIPSMLIVIISWVSFWIHR 232
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
+A+PARV LGVT++LT++T + ASLP VSY+KA+D ++ C V
Sbjct: 233 DASPARVALGVTTVLTMTTLMTTTNASLPKVSYIKAIDIYLGTCFV 278
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 5/109 (4%)
Query: 58 ELPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFW 117
EL L +V+ K STG+++ L R L +Y Y P ++V++SWVSFW
Sbjct: 467 ELQDLFIVERKIT-----LSTGDYSRLTCHLTFSRNLSFYWVQIYQPALMVVMISWVSFW 521
Query: 118 IKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
I E+APARVTLG+ ++LT++T + LP VSY+KAVD ++ C V
Sbjct: 522 ISRESAPARVTLGIMTVLTMTTLMTTTNGQLPKVSYVKAVDIYLGFCYV 570
>gi|332824528|ref|XP_003311431.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Pan
troglodytes]
gi|332824530|ref|XP_003311432.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 [Pan
troglodytes]
Length = 392
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 104 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 163
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 164 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 223
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 224 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 261
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 1 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 58
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 59 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 110
>gi|397504696|ref|XP_003822919.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Pan paniscus]
Length = 462
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 174 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 233
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 234 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 293
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 294 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDVYL 331
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 71 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 128
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 129 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 180
>gi|2565315|gb|AAB81965.1| gamma-aminobutyric acid receptor rho2 subunit [Mus musculus]
Length = 465
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+ ++LT+ST AS+P VSY++AVD ++
Sbjct: 291 PARVSLGIMTVLTMSTIITGVNASMPRVSYIRAVDIYL 328
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V +DSI E M + ++ WKD RL P ++MT
Sbjct: 68 MRPA--FGGPAIPVGVDVQVESVDSISEVDMDFTMTLYLKHYWKDERLAFPSSSNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL+ K +W PD FF ++K Q T N + ++ D +LY ++ A+
Sbjct: 126 DGRLV-----KKIWVPDVFFVHSKRSFIQDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
>gi|397504694|ref|XP_003822918.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Pan paniscus]
Length = 480
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 192 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 251
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 252 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 311
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 312 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDVYL 349
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 89 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 146
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 147 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 198
>gi|297291321|ref|XP_002803871.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Macaca mulatta]
gi|332218467|ref|XP_003258376.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Nomascus leucogenys]
gi|332218469|ref|XP_003258377.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Nomascus leucogenys]
gi|402867634|ref|XP_003897946.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Papio anubis]
gi|402867636|ref|XP_003897947.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Papio anubis]
gi|426353970|ref|XP_004044445.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Gorilla gorilla gorilla]
gi|426353972|ref|XP_004044446.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Gorilla gorilla gorilla]
Length = 392
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 104 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 163
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 164 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 223
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 224 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 261
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 1 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 58
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 59 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 110
>gi|167234236|ref|NP_001107808.1| GABA receptor isoform a precursor [Tribolium castaneum]
gi|156447603|gb|ABU63594.1| GABA-gated anion channel splice variant 3a6a [Tribolium castaneum]
Length = 482
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 105/167 (62%), Gaps = 1/167 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIEL 59
+T RLT+ SC MN +P D Q C +++ES +T D+ ++W+ + + + ++EL
Sbjct: 151 ITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNSGVKSVGISNEVEL 210
Query: 60 PQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIK 119
PQ +++ ++ +TGN++ L R +GYYL YIP+ LIVI+SWVSFW+
Sbjct: 211 PQFRVLGHRQRATVINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLN 270
Query: 120 PEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A PARV LGVT++LT++T + + A+LP +SY+K++D ++ C V
Sbjct: 271 RNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 317
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + V+ + S+ E M + D +F Q W D RL + E
Sbjct: 48 YDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDPRLAFRKRPGVET 107
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +++KN+W PD+FF N K F T N ++ ++ +I ++ A
Sbjct: 108 LSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITA 161
>gi|387538826|gb|AFJ79638.1| GABA-gated chloride channel subunit, partial [Laodelphax
striatella]
Length = 401
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP--LAVDEKIE 58
+T RLT+ SC MN +P D Q C +++ES +T D+ ++W+ E P + V ++
Sbjct: 121 ITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGPNSVGVSNEVS 179
Query: 59 LPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWI 118
LPQ +++ ++ +TGN++ L R +GYYL YIP+ LIVI+SWVSFW+
Sbjct: 180 LPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWL 239
Query: 119 KPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A PARV LGVT++LT++T + + A+LP +SY+K++D ++ C V
Sbjct: 240 NRNATPARVNLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 287
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + V+ + S+ E M + D +F Q W D RL + E
Sbjct: 18 YDKRVRPNYGGPPVEVGVTMYVLSISSLSEVQMDFTLDFYFRQFWTDPRLAFRKRPGVET 77
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +++KN+W PD+FF N K F T N ++ ++ +I ++ A
Sbjct: 78 LSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITA 131
>gi|395849982|ref|XP_003797583.1| PREDICTED: LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor
subunit rho-2 [Otolemur garnettii]
Length = 509
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 215 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 274
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 275 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDCRAV 334
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+ ++LT+ST AS+P VSY+KAVD ++
Sbjct: 335 PARVSLGIMTVLTMSTIITGVNASMPRVSYIKAVDIYL 372
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 112 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSMTF 169
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 170 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 221
>gi|431892472|gb|ELK02910.1| Gamma-aminobutyric acid receptor subunit rho-3 [Pteropus alecto]
Length = 359
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++ +DL+ W L DE I L Q +
Sbjct: 68 RITVSAMCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKHGNKSLNTDEHISLSQFFI 127
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ + YS TG + L + FVL+R + +++ TY P L+VI+SWVSFWI A
Sbjct: 128 EEFSASSGFAFYSSTGWYNRLFINFVLRRHVFFFVLQTYFPAMLMVILSWVSFWIDRRAV 187
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST + AS+P VSY+KAVD ++
Sbjct: 188 PARVSLGITTVLTMSTIISGMSASMPQVSYIKAVDVYL 225
>gi|395737478|ref|XP_002817187.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-2 [Pongo
abelii]
Length = 492
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 241 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 300
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 301 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 360
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 361 PARVSLGITTVLTMSTIITGVNASMPRVSYVKAVDIYL 398
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 199 VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTSEYRLLEVDWLKNM 254
V V V LDSI E M + ++ WKD RL ++MT + RL +K +
Sbjct: 149 VGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTFDGRL-----VKKI 203
Query: 255 WRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 204 WVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 247
>gi|410516955|sp|P56476.4|GBRR2_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit rho-2;
AltName: Full=GABA(A) receptor subunit rho-2; AltName:
Full=GABA(C) receptor; Flags: Precursor
Length = 465
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+ ++LT+ST AS+P VSY++AVD ++
Sbjct: 291 PARVSLGIMTVLTMSTIITGVNASMPRVSYIRAVDIYL 328
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ W+D RL P ++MT
Sbjct: 68 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
>gi|375493572|ref|NP_001243633.1| gamma-aminobutyric acid receptor subunit rho-1 isoform c [Homo
sapiens]
gi|389886549|ref|NP_001254511.1| gamma-aminobutyric acid receptor subunit rho-1 isoform c [Homo
sapiens]
Length = 392
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 104 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 163
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 164 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 223
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 224 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 261
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 1 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 58
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 59 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 110
>gi|194386474|dbj|BAG61047.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 104 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 163
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 164 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 223
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 224 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 261
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 1 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 58
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 59 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 110
>gi|397739455|gb|AFO62384.1| GABA-gated chloride channel, partial [Laodelphax striatella]
Length = 401
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP--LAVDEKIE 58
+T RLT+ SC MN +P D Q C +++ES +T D+ ++W+ E P + V ++
Sbjct: 121 ITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGPNSVGVSNEVS 179
Query: 59 LPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWI 118
LPQ +++ ++ +TGN++ L R +GYYL YIP+ LIVI+SWVSFW+
Sbjct: 180 LPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWL 239
Query: 119 KPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A PARV LGVT++LT++T + + A+LP +SY+K++D ++ C V
Sbjct: 240 NRNATPARVNLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 287
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + V+ + S+ E M + D +F Q W D RL + E
Sbjct: 18 YDKRVRPNYGGPPVEVGVTMYVLSISSLSEVQMDFTLDFYFRQFWTDPRLAFRKRPGVET 77
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ ++ KN+W PD+FF N K F T N ++ ++ +I ++ A
Sbjct: 78 LSVGSEFTKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITA 131
>gi|126310323|ref|XP_001367190.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1
[Monodelphis domestica]
Length = 473
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 186 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 245
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 246 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 305
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 306 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 343
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 83 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 140
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 141 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 192
>gi|395534596|ref|XP_003769326.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Sarcophilus harrisii]
Length = 455
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 168 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 227
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 228 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 287
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 288 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 325
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 65 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 122
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 123 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 174
>gi|403261134|ref|XP_003922985.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 3
[Saimiri boliviensis boliviensis]
gi|403261136|ref|XP_003922986.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 4
[Saimiri boliviensis boliviensis]
Length = 392
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 104 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 163
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 164 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 223
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 224 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 261
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 1 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 58
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 59 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 110
>gi|410959654|ref|XP_003986418.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Felis catus]
Length = 392
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 104 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 163
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 164 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 223
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 224 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 261
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 1 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 58
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 59 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 110
>gi|431838152|gb|ELK00084.1| Gamma-aminobutyric acid receptor subunit rho-1 [Pteropus alecto]
Length = 462
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 174 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 233
Query: 65 VK-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ + T + STG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 234 QEFHTTTKLAYYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 293
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 294 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 331
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 71 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 128
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 129 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 180
>gi|397739453|gb|AFO62383.1| GABA-gated chloride channel, partial [Laodelphax striatella]
Length = 400
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP--LAVDEKIE 58
+T RLT+ SC MN +P D Q C +++ES +T D+ ++W+ E P + V ++
Sbjct: 121 ITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGPNSVGVSNEVS 179
Query: 59 LPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWI 118
LPQ +++ ++ +TGN++ L R +GYYL YIP+ LIVI+SWVSFW+
Sbjct: 180 LPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWL 239
Query: 119 KPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A PARV LGVT++LT++T + + A+LP +SY+K++D ++ C V
Sbjct: 240 NRNATPARVNLGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 287
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + V+ + S+ E M + D +F Q W D RL + E
Sbjct: 18 YDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDPRLAFRKRPGVET 77
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +++KN+W PD+FF N K F T N ++ ++ +I ++ A
Sbjct: 78 LSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHHSGSITRSIRLTITA 131
>gi|395534594|ref|XP_003769325.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Sarcophilus harrisii]
Length = 473
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 186 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 245
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 246 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 305
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 306 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 343
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 83 MRPGF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 140
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 141 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 192
>gi|153792493|ref|NP_001093294.1| GABA-gated chlorine channel alpha subunit precursor [Bombyx mori]
gi|145843755|gb|ABP96889.1| GABA-gated chlorine channel alpha subunit [Bombyx mori]
Length = 482
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 106/168 (63%), Gaps = 3/168 (1%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP--LAVDEKIE 58
+T RLT+ +SC MN +P D Q C +++ES +T D+ ++W+ E P + V ++
Sbjct: 154 ITRSIRLTITVSCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGPNSVGVSSEVS 212
Query: 59 LPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWI 118
LPQ +++ ++ +TGN++ L R +GYYL YIP+ LIVI+SWVSFW+
Sbjct: 213 LPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWL 272
Query: 119 KPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A PARV LGVT++LT++T + + A+LP +SY+K++D ++ C V
Sbjct: 273 NRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 320
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + V+ + S+ E M + D +F Q W D RL + E
Sbjct: 51 YDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYKKRTGVET 110
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+ +++KN+W PD+FF N K F T N ++ ++ +I ++
Sbjct: 111 LSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRIHYSGSITRSIRL 160
>gi|380028793|ref|XP_003698071.1| PREDICTED: glycine receptor subunit alpha-3-like [Apis florea]
Length = 502
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 103/171 (60%), Gaps = 12/171 (7%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL L+C + +P D QECSL ES +H D++ WD E P+ + +++ L + +LV
Sbjct: 166 RLQATLNCGLRLEKFPFDVQECSLVFESWTHNVLDMVLYWDQE-PIILADELHLTEYKLV 224
Query: 66 KNKTADCSQVYST----------GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVS 115
+ K + S+V+ T GNF+ + + F L R +G+++ YIP+ LIV++SWVS
Sbjct: 225 E-KWVNASEVFYTISQQHYGHFAGNFSSISITFKLAREMGFFMMDYYIPSILIVVISWVS 283
Query: 116 FWIKPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
FW+ +A+P R+ LG ++LT T +K + SLP VSY+KA + + CT+
Sbjct: 284 FWLHMDASPPRIVLGTNTILTFMTLASKVENSLPKVSYIKASEIWFLGCTI 334
>gi|410959652|ref|XP_003986417.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Felis catus]
Length = 462
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 174 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 233
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 234 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 293
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 294 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 331
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 71 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 128
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 129 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 180
>gi|395849939|ref|XP_003797564.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Otolemur garnettii]
Length = 462
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 174 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 233
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 234 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 293
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 294 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 331
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 71 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTNNLSMTF 128
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 129 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 180
>gi|332218465|ref|XP_003258375.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Nomascus leucogenys]
Length = 462
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 174 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 233
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 234 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 293
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 294 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 331
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 71 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 128
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 129 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 180
>gi|354466063|ref|XP_003495495.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Cricetulus griseus]
Length = 475
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 192 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 251
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 252 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 311
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 312 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 349
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 89 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 146
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 147 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 198
>gi|403261132|ref|XP_003922984.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 2
[Saimiri boliviensis boliviensis]
Length = 473
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 185 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 244
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 245 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 304
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 305 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 342
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 82 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 139
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 140 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 191
>gi|403261130|ref|XP_003922983.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Saimiri boliviensis boliviensis]
Length = 456
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 168 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 227
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 228 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 287
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 288 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 325
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 65 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 122
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 123 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 174
>gi|349917682|dbj|GAA28305.1| glycine receptor subunit beta [Clonorchis sinensis]
Length = 502
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 103/162 (63%), Gaps = 3/162 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
++T++L+C M +P DTQ+C + + S +T + L F W E P+ + +++ +
Sbjct: 152 KITMRLACQMRLHTFPMDTQQCDMDIGSYGYTLEQLRFVWRNETPVWLPSDLQISEFDPP 211
Query: 66 KNKT-ADCSQVY--STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + DCS +Y STG +TCL V F+L R++GY+L TYIP LI+++SW++FW+ EA
Sbjct: 212 KKVSPNDCSSLYQTSTGQYTCLNVTFLLSRQIGYWLASTYIPNILIMVVSWLNFWVSLEA 271
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV L + +LL L TQ +SLP VSY+KA+D + AC
Sbjct: 272 TPARVNLSLLTLLGLITQSTSYASSLPRVSYIKAIDVWSIAC 313
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 12/152 (7%)
Query: 154 LKAVDAFMSACTV--SSTSLTFNDILPEDP---KLY----DKMRPPKKEGQPTIVYFHVT 204
L +++ F S + S +L N I D KL+ + +RP + T+V +++
Sbjct: 2 LPSLNTFTSVLLIIGQSEALGTNSISVRDEIINKLFVDYKNHVRPSEHTQNETVVTVYLS 61
Query: 205 VMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPENMTSEYRLLEVDWLKNMWRPDSFF 261
+ + S+D +M Y D+ Q W+D RL +P ++ + +W PD FF
Sbjct: 62 ISAITSVDVRNMEYTVDMLLRQAWRDPRLAWEHIPHFSNYTKNIVSPKFKTKIWLPDLFF 121
Query: 262 KNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+N K MT N + + + +LY K
Sbjct: 122 RNGKEGRLHKMTCENLLIRIQPNGDVLYSQKI 153
>gi|348563379|ref|XP_003467485.1| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1-like
[Cavia porcellus]
Length = 474
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 186 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 245
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 246 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 305
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 306 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 343
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 83 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 140
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 141 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 192
>gi|375493570|ref|NP_001243632.1| gamma-aminobutyric acid receptor subunit rho-1 isoform b precursor
[Homo sapiens]
Length = 462
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 174 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 233
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 234 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 293
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 294 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 331
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 71 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 128
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 129 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 180
>gi|402691983|ref|NP_032101.3| gamma-aminobutyric acid receptor subunit rho-1 precursor [Mus
musculus]
gi|223590211|sp|P56475.2|GBRR1_MOUSE RecName: Full=Gamma-aminobutyric acid receptor subunit rho-1;
AltName: Full=GABA(A) receptor subunit rho-1; AltName:
Full=GABA(C) receptor; Flags: Precursor
Length = 480
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 192 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 251
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 252 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 311
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 312 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 349
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 89 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSSNNLSMTF 146
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 147 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 198
>gi|222430668|gb|ACM50327.1| GABA receptor Rdl subunit short transcript variant [Periplaneta
americana]
Length = 331
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP--LAVDEKIE 58
+T RLT+ SC MN +P D Q C +++ES +T D+ ++W+ E P + V ++
Sbjct: 43 ITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGPNSVGVSNEVS 101
Query: 59 LPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWI 118
LPQ +++ ++ +TGN++ L R +GYYL YIP+ LIVI+SWVSFW+
Sbjct: 102 LPQFKVLGHRQRAMEIGLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWL 161
Query: 119 KPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A PARV LGVT++LT++T + + A+LP +SY+K++D ++ C V
Sbjct: 162 NRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 209
>gi|332824526|ref|XP_001157592.2| PREDICTED: gamma-aminobutyric acid receptor subunit rho-1 isoform 1
[Pan troglodytes]
Length = 462
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 174 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 233
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 234 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 293
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 294 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 331
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 71 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 128
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 129 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 180
>gi|194097386|ref|NP_002033.2| gamma-aminobutyric acid receptor subunit rho-1 isoform a precursor
[Homo sapiens]
gi|223590210|sp|P24046.2|GBRR1_HUMAN RecName: Full=Gamma-aminobutyric acid receptor subunit rho-1;
AltName: Full=GABA(A) receptor subunit rho-1; AltName:
Full=GABA(C) receptor; Flags: Precursor
gi|119568943|gb|EAW48558.1| gamma-aminobutyric acid (GABA) receptor, rho 1 [Homo sapiens]
Length = 479
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 191 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 250
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 251 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 310
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 311 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 348
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 88 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 145
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 146 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 197
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.136 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,140,222,447
Number of Sequences: 23463169
Number of extensions: 245481222
Number of successful extensions: 810211
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2878
Number of HSP's successfully gapped in prelim test: 1601
Number of HSP's that attempted gapping in prelim test: 794124
Number of HSP's gapped (non-prelim): 11975
length of query: 392
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 248
effective length of database: 8,980,499,031
effective search space: 2227163759688
effective search space used: 2227163759688
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 78 (34.7 bits)