BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5854
(392 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P24524|GLRA3_RAT Glycine receptor subunit alpha-3 OS=Rattus norvegicus GN=Glra3 PE=2
SV=1
Length = 464
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 45/126 (35%), Gaps = 30/126 (23%)
Query: 293 FVFMALMEYCLVNIVLGD--------SDLPKPPEPAKQDKIFELA-----AKENARLLTG 339
FVF AL+EY VN V E +K + + +E+ T
Sbjct: 326 FVFSALLEYAAVNFVSRQHKELLRFRRKRKNKTEAFALEKFYRFSDTDDEVRESRLSFTA 385
Query: 340 QPMIP------------PNHQ-QAQRNLAQRART----RAINIDRFSRVFFPVLFAILNC 382
M P PNH Q A R RA ID SR FP+ F I N
Sbjct: 386 YGMGPCLQAKDGVVPKGPNHAVQVMPKSADEMRKVFIDRAKKIDTISRACFPLAFLIFNI 445
Query: 383 TYWIMF 388
YW+++
Sbjct: 446 FYWVIY 451
>sp|Q91XP5|GLRA3_MOUSE Glycine receptor subunit alpha-3 OS=Mus musculus GN=Glra3 PE=2 SV=2
Length = 464
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
Score = 32.0 bits (71), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 361 RAINIDRFSRVFFPVLFAILNCTYWIMF 388
RA ID SR FP+ F I N YW+++
Sbjct: 424 RAKKIDTISRACFPLAFLIFNIFYWVIY 451
>sp|O75311|GLRA3_HUMAN Glycine receptor subunit alpha-3 OS=Homo sapiens GN=GLRA3 PE=2 SV=2
Length = 464
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 117/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
Score = 32.0 bits (71), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 361 RAINIDRFSRVFFPVLFAILNCTYWIMF 388
RA ID SR FP+ F I N YW+++
Sbjct: 424 RAKKIDTISRACFPLAFLIFNIFYWVIY 451
>sp|P23416|GLRA2_HUMAN Glycine receptor subunit alpha-2 OS=Homo sapiens GN=GLRA2 PE=2 SV=1
Length = 452
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 42/115 (36%), Gaps = 19/115 (16%)
Query: 293 FVFMALMEYCLVNIV----------LGDSDLPKPPEPAKQDKIFELAAK--------ENA 334
FVF AL+EY VN V E ++ F + ++
Sbjct: 327 FVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNKEEDVTRESRFNFSGYGMGHCLQVKDG 386
Query: 335 RLLTGQPMIP-PNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+ P P P + + ++ RA ID SR FP+ F I N YWI +
Sbjct: 387 TAVKATPANPLPQPPKDGDAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITY 441
>sp|Q7TNC8|GLRA2_MOUSE Glycine receptor subunit alpha-2 OS=Mus musculus GN=Glra2 PE=2 SV=1
Length = 452
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 42/115 (36%), Gaps = 19/115 (16%)
Query: 293 FVFMALMEYCLVNIV----------LGDSDLPKPPEPAKQDKIFELAA--------KENA 334
FVF AL+EY VN V E ++ F + ++
Sbjct: 327 FVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNKEEDVTRESRFNFSGYGMGHCLQMKDG 386
Query: 335 RLLTGQPMIP-PNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+ P P P + + ++ RA ID SR FP+ F I N YWI +
Sbjct: 387 TAVKATPANPLPQPPKDADAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITY 441
>sp|P22771|GLRA2_RAT Glycine receptor subunit alpha-2 OS=Rattus norvegicus GN=Glra2 PE=1
SV=1
Length = 452
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 118/160 (73%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y +IF Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LAYSE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 42/115 (36%), Gaps = 19/115 (16%)
Query: 293 FVFMALMEYCLVNIV----------LGDSDLPKPPEPAKQDKIFELAAK--------ENA 334
FVF AL+EY VN V E ++ F + ++
Sbjct: 327 FVFAALLEYAAVNFVSRQHKEFLRLRRRQKRQNKEEDVTRESRFNFSGYGMGHCLQVKDG 386
Query: 335 RLLTGQPMIP-PNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+ P P P + + ++ RA ID SR FP+ F I N YWI +
Sbjct: 387 TAVKATPANPLPQPPKDADAIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWITY 441
>sp|O93430|GLRA1_DANRE Glycine receptor subunit alphaZ1 OS=Danio rerio GN=glra1 PE=2 SV=1
Length = 444
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+WD + + V + + LPQ L
Sbjct: 155 RITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILK 214
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 215 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 274
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 275 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 314
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E +
Sbjct: 48 YDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSE-YPDDS 106
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L+ L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 107 LDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIR 155
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 45/117 (38%), Gaps = 21/117 (17%)
Query: 293 FVFMALMEYCLVN-IVLGDSDLPK-------PPEPAKQDKIFELAA---------KENAR 335
FVF AL+EY VN I +L + E D F AA ++
Sbjct: 317 FVFSALLEYAAVNFIARQHKELLRFQRRRRHLKEDEAGDGRFSFAAYGMGPACLQAKDGM 376
Query: 336 LLTGQPMIPPNHQQAQRNLAQRAR----TRAINIDRFSRVFFPVLFAILNCTYWIMF 388
+ G P + R +RA ID SRV FP++F I N YWI +
Sbjct: 377 AIKGNNNNAPTSTNPPEKTVEEMRKLFISRAKRIDTVSRVAFPLVFLIFNIFYWITY 433
>sp|Q61603|GLRA4_MOUSE Glycine receptor subunit alpha-4 OS=Mus musculus GN=Glra4 PE=2 SV=3
Length = 456
Score = 175 bits (444), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 164 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFIL 223
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 224 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 283
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + S+ E +M Y ++F Q W D R
Sbjct: 46 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPR 105
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 106 LAYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
Query: 293 FVFM 296
+
Sbjct: 165 LTLI 168
>sp|Q5JXX5|GLRA4_HUMAN Glycine receptor subunit alpha-4 OS=Homo sapiens GN=GLRA4 PE=2 SV=3
Length = 417
Score = 174 bits (442), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCLMDLKNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTADC-SQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C ++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
PARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI + +M Y ++F Q W D R
Sbjct: 47 FLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFSSITKTTMDYRVNVFLRQQWNDPR 106
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 107 LSYRE-YPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 165
Query: 293 FVFMALMEYCLVNI 306
+ L+ CL+++
Sbjct: 166 ---LTLILSCLMDL 176
>sp|Q64018|GLRA1_MOUSE Glycine receptor subunit alpha-1 OS=Mus musculus GN=Glra1 PE=1 SV=2
Length = 457
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 361 RAINIDRFSRVFFPVLFAILNCTYWIMF 388
RA ID+ SR+ FP+ F I N YWI++
Sbjct: 419 RAKKIDKISRIGFPMAFLIFNMFYWIIY 446
>sp|P07727|GLRA1_RAT Glycine receptor subunit alpha-1 OS=Rattus norvegicus GN=Glra1 PE=1
SV=4
Length = 457
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K DA SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEADAARSAPKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 361 RAINIDRFSRVFFPVLFAILNCTYWIMF 388
RA ID+ SR+ FP+ F I N YWI++
Sbjct: 419 RAKKIDKISRIGFPMAFLIFNMFYWIIY 446
>sp|P57695|GLRA1_BOVIN Glycine receptor subunit alpha-1 OS=Bos taurus GN=GLRA1 PE=2 SV=1
Length = 457
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +A SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEAEAARSASKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E + L+ L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
Score = 36.2 bits (82), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 344 PPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
PP ++ + + RA ID+ SR+ FP+ F I N YWI++
Sbjct: 402 PPAPSKSPEEMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 446
>sp|P23415|GLRA1_HUMAN Glycine receptor subunit alpha-1 OS=Homo sapiens GN=GLRA1 PE=1 SV=2
Length = 457
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 1/160 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
ARV LG+T++LT++TQ + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 173 FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHR 232
F D L YD P +G P V ++ + SI E +M Y +IF Q W D R
Sbjct: 41 FLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 100
Query: 233 LRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L E + L+ L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 101 LAYNE-YPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 159
Score = 36.2 bits (82), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 344 PPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMF 388
PP ++ + + RA ID+ SR+ FP+ F I N YWI++
Sbjct: 402 PPAPSKSPEEMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIY 446
>sp|Q94900|GLUCL_DROME Glutamate-gated chloride channel OS=Drosophila melanogaster
GN=GluClalpha PE=1 SV=2
Length = 456
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+LGVT+LLT++TQ + ASLPPVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 314
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 153 YLKAVDAFMSACTVSSTSLTFNDILPEDPKLYD----------KMRPPKKEG--QPTIVY 200
Y A+ F S C+ S + + ++ K+ D ++RP G P IV
Sbjct: 6 YFWAILYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAIVR 65
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ V + +I + M Y+ + F + W D RL+ +++ + L + +W PD F
Sbjct: 66 INLFVRSIMTISDIKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLF 124
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 169
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 357 RARTRAINIDRFSRVFFPVLFAILNCTYW 385
R +R+ ID SR+ FP++FA+ N YW
Sbjct: 417 RQCSRSKRIDVISRITFPLVFALFNLVYW 445
>sp|Q9GJS9|GLRB_BOVIN Glycine receptor subunit beta OS=Bos taurus GN=GLRB PE=2 SV=1
Length = 497
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TIL 288
+L
Sbjct: 170 DVL 172
>sp|P48167|GLRB_HUMAN Glycine receptor subunit beta OS=Homo sapiens GN=GLRB PE=1 SV=1
Length = 497
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>sp|P20781|GLRB_RAT Glycine receptor subunit beta OS=Rattus norvegicus GN=Glrb PE=1
SV=1
Length = 496
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 21/152 (13%)
Query: 138 STQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPT 197
S Q A+ A +PP +STS N +L YD P +G P
Sbjct: 41 SQQSAEDLARVPP----------------NSTSNILNRLLVS----YDPRIRPNFKGIPV 80
Query: 198 IVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENM-TSEYRLLEVDWLKNMWR 256
V ++ + SI E +M Y +IF Q W D RL+LP + S+ ++ K +W+
Sbjct: 81 DVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPSDFRGSDALTVDPTMYKCLWK 140
Query: 257 PDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
PD FF N K+ F +T N +++++D +L
Sbjct: 141 PDLFFANEKSANFHDVTQENILLFIFRDGDVL 172
>sp|P48168|GLRB_MOUSE Glycine receptor subunit beta OS=Mus musculus GN=Glrb PE=1 SV=2
Length = 496
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ ARV LG+ S+L+L+++ A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENM-TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKF 293
+L ++
Sbjct: 170 DVLVSMRL 177
>sp|Q08832|GBRB3_DROME Gamma-aminobutyric acid receptor subunit beta-like OS=Drosophila
melanogaster GN=Lcch3 PE=1 SV=2
Length = 496
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W P P+ E ELP
Sbjct: 164 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPT-PVRGVEDAELP 222
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 223 QFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 282
Query: 121 EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 283 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 328
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 14/141 (9%)
Query: 163 ACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADI 222
A + + + T ++IL + YD P G+P V +T+ D+I E +M Y +
Sbjct: 34 AGRLENVTQTISNIL----QGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITM 89
Query: 223 FFAQTWKDHRLRL----------PENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTM 272
+ Q W+D RL ++ S+ L D+ + +W PD+FF N K +
Sbjct: 90 YLNQYWRDERLAFNIFGQYFDDENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 149
Query: 273 TIPNHYVWLYKDKTILYMVKF 293
T N V L D + Y ++F
Sbjct: 150 TERNKLVRLGGDGAVTYGMRF 170
>sp|P26714|GBRB_LYMST Gamma-aminobutyric acid receptor subunit beta OS=Lymnaea stagnalis
PE=2 SV=1
Length = 499
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R T L+C M+ YP D QEC++++ES +T DD++ W + + E + LPQ +
Sbjct: 160 RFTTTLACMMDLHNYPLDHQECTVEIESYGYTMDDIVLYWLNDRGAVTGVEDVSLPQFSI 219
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
T + + STG++ L +IF L+R +GY++F TY+P+ LIV++SWVSFWI EA
Sbjct: 220 TNYATINKIEELSTGDYQRLSLIFQLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEATS 279
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T ++SLP +SY+KA+D ++ C V
Sbjct: 280 ARVALGITTVLTMTTISNGVRSSLPRISYVKAIDIYLVMCFV 321
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR------- 234
K YD P G P + V + DSI E M Y ++ Q W+D RL+
Sbjct: 42 KGYDIRLRPSFGGAPLEIGIEVILASFDSISEVDMDYTITMYLNQYWRDERLQFIFNESL 101
Query: 235 -LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
L EN + L + + +W PD+F N K +T N V LY + +++Y ++F
Sbjct: 102 DLGENRSVTTMTLTGAFAEKIWVPDTFLANDKNSFLHDITEKNKMVRLYGNGSLVYGMRF 161
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 9/55 (16%)
Query: 343 IPPNHQQAQRNLAQRA--------RTRAIN-IDRFSRVFFPVLFAILNCTYWIMF 388
+PP ++ + Q+A R + +N ID+++R+ FP+LF I N +YW ++
Sbjct: 442 VPPRRRRLLSHFRQKAKSIKVKIPRVQDVNTIDKYARLMFPLLFIIFNTSYWSVY 496
>sp|P28472|GBRB3_HUMAN Gamma-aminobutyric acid receptor subunit beta-3 OS=Homo sapiens
GN=GABRB3 PE=1 SV=1
Length = 473
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFAE 390
IDR+SR+ FP F++ N YW+ +
Sbjct: 448 IDRWSRIVFPFTFSLFNLVYWLYYVN 473
>sp|P63079|GBRB3_RAT Gamma-aminobutyric acid receptor subunit beta-3 OS=Rattus
norvegicus GN=Gabrb3 PE=1 SV=1
Length = 473
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 331 KENARLLTGQPMIPPNHQQAQRNLAQRA-----RTRAINIDRFSRVFFPVLFAILNCTYW 385
KE G IP +R +Q T IDR+SR+ FP F++ N YW
Sbjct: 409 KEGHGRYMGDRSIPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYW 468
Query: 386 IMFAE 390
+ +
Sbjct: 469 LYYVN 473
>sp|P63080|GBRB3_MOUSE Gamma-aminobutyric acid receptor subunit beta-3 OS=Mus musculus
GN=Gabrb3 PE=2 SV=1
Length = 473
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 331 KENARLLTGQPMIPPNHQQAQRNLAQRA-----RTRAINIDRFSRVFFPVLFAILNCTYW 385
KE G IP +R +Q T IDR+SR+ FP F++ N YW
Sbjct: 409 KEGHGRYMGDRSIPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYW 468
Query: 386 IMFAE 390
+ +
Sbjct: 469 LYYVN 473
>sp|O18276|GBRB_CAEEL Gamma-aminobutyric acid receptor subunit beta OS=Caenorhabditis
elegans GN=gab-1 PE=2 SV=3
Length = 550
Score = 145 bits (365), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 109/163 (66%), Gaps = 4/163 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD--EKIELPQLQ 63
RLT LSC+MN +P D+Q C++++ES +TT +++ +W+ PLAV E+ ++PQ
Sbjct: 173 RLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMKWN--YPLAVHGVEQADVPQFT 230
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T D +TG++ L ++F L+R +GY++F TY+P LIV++SWVSFWI EA
Sbjct: 231 ITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEAT 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + SLP +SY+K++D ++ C V
Sbjct: 291 SARVALGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFV 333
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%)
Query: 190 PKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVD 249
P G ++ + + DSI E M Y ++ Q W D RLR + + L +
Sbjct: 71 PGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQYWTDERLRWSNEIPIDEMTLSGE 130
Query: 250 WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
+ +N+W PD+F N K +T N + + D + Y ++
Sbjct: 131 FSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRL 174
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 317 PEPAKQDKIFELAAKENARLLTGQPMIPPN--HQQAQRNLAQRAR-------TRAIN-ID 366
P + K L + +AR + N +Q+ + +RAR R +N ID
Sbjct: 464 PHASLNHKTHHLKGRSSARAKRRMTLARMNVSMKQSISGIGRRARKVIPTIRVRDVNLID 523
Query: 367 RFSRVFFPVLFAILNCTYW 385
++SRV FPV F + N YW
Sbjct: 524 KYSRVVFPVCFIVFNLFYW 542
>sp|D1LYT2|GBRB2_MACMU Gamma-aminobutyric acid receptor subunit beta-2 OS=Macaca mulatta
GN=GABRB2 PE=2 SV=1
Length = 512
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 445 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 504
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 505 VYWLYYVN 512
>sp|P47870|GBRB2_HUMAN Gamma-aminobutyric acid receptor subunit beta-2 OS=Homo sapiens
GN=GABRB2 PE=1 SV=2
Length = 512
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 445 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 504
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 505 VYWLYYVN 512
>sp|P19019|GBRB3_CHICK Gamma-aminobutyric acid receptor subunit beta-3 OS=Gallus gallus
GN=GABRB3 PE=2 SV=1
Length = 476
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+ + + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Score = 32.0 bits (71), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFAE 390
IDR+SR+ FP F++ N YW+ +
Sbjct: 451 IDRWSRMVFPFTFSLFNLIYWLYYVN 476
>sp|P63138|GBRB2_RAT Gamma-aminobutyric acid receptor subunit beta-2 OS=Rattus
norvegicus GN=Gabrb2 PE=1 SV=1
Length = 474
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 153
Score = 39.3 bits (90), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 56/160 (35%), Gaps = 62/160 (38%)
Query: 293 FVFMALMEYCLVN-IVLGD-----------------------------------SDLPKP 316
FVFMAL+EY LVN I G S L
Sbjct: 315 FVFMALLEYALVNYIFFGRGPQRQKKAAEKAANANNEKMRLDVNKMDPHENILLSTLEIK 374
Query: 317 PEPAKQDKIFELAAKENARLL----------TGQPMIPPNHQQAQRNLAQ---RARTRA- 362
E A + + L + L G P +R++AQ R R RA
Sbjct: 375 NEMATSEAVMGLGDPRSTMLAYDASSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRAS 434
Query: 363 -----------IN-IDRFSRVFFPVLFAILNCTYWIMFAE 390
+N IDR+SR+FFPV+F+ N YW+ +
Sbjct: 435 QLKITIPDLTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN 474
>sp|P63137|GBRB2_MOUSE Gamma-aminobutyric acid receptor subunit beta-2 OS=Mus musculus
GN=Gabrb2 PE=1 SV=2
Length = 512
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 38.5 bits (88), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 16/68 (23%)
Query: 339 GQPMIPPNHQQAQRNLAQ---RARTRA------------IN-IDRFSRVFFPVLFAILNC 382
G P +R++AQ R R RA +N IDR+SR+FFPV+F+ N
Sbjct: 445 GLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPDLTDVNAIDRWSRIFFPVVFSFFNI 504
Query: 383 TYWIMFAE 390
YW+ +
Sbjct: 505 VYWLYYVN 512
>sp|P0C2W5|GBRB2_BOVIN Gamma-aminobutyric acid receptor subunit beta-2 (Fragment) OS=Bos
taurus GN=GABRB2 PE=1 SV=1
Length = 472
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 151 RITTTTACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGV-TKIELPQFS 209
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 210 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 269
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 270 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 312
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 43 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 102
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++
Sbjct: 103 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLR 151
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFAE 390
IDR+SR+FFPV+F+ N YW+ +
Sbjct: 447 IDRWSRIFFPVVFSFFNIVYWLYYVN 472
>sp|P08220|GBRB1_BOVIN Gamma-aminobutyric acid receptor subunit beta-1 OS=Bos taurus
GN=GABRB1 PE=2 SV=1
Length = 474
Score = 142 bits (357), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Score = 35.8 bits (81), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 20/27 (74%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMFAE 390
+ID++SR+FFP+ F++ N YW+ +
Sbjct: 448 SIDKWSRMFFPITFSLFNVVYWLYYVH 474
>sp|P50571|GBRB1_MOUSE Gamma-aminobutyric acid receptor subunit beta-1 OS=Mus musculus
GN=Gabrb1 PE=1 SV=1
Length = 474
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Score = 35.8 bits (81), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 20/27 (74%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMFAE 390
+ID++SR+FFP+ F++ N YW+ +
Sbjct: 448 SIDKWSRMFFPITFSLFNVVYWLYYVH 474
>sp|P15431|GBRB1_RAT Gamma-aminobutyric acid receptor subunit beta-1 OS=Rattus
norvegicus GN=Gabrb1 PE=2 SV=1
Length = 474
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Score = 35.8 bits (81), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 20/27 (74%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMFAE 390
+ID++SR+FFP+ F++ N YW+ +
Sbjct: 448 SIDKWSRMFFPITFSLFNVVYWLYYVH 474
>sp|P18505|GBRB1_HUMAN Gamma-aminobutyric acid receptor subunit beta-1 OS=Homo sapiens
GN=GABRB1 PE=2 SV=2
Length = 474
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 102/162 (62%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LG+T++LT++T + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTA 159
Score = 35.8 bits (81), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 20/27 (74%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMFAE 390
+ID++SR+FFP+ F++ N YW+ +
Sbjct: 448 SIDKWSRMFFPITFSLFNVVYWLYYVH 474
>sp|P24045|GBRB4_CHICK Gamma-aminobutyric acid receptor subunit beta-4 OS=Gallus gallus
GN=GABRB4 PE=2 SV=1
Length = 488
Score = 141 bits (355), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +T DD++F W + + E +ELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGMEVLELPQFTI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++ + V++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 IEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
ARV LGVT++LT++T + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 314
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 154 LKAVDAFMSACTVSSTSL----TFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLD 209
+ A+ A AC S S +I+ + K YD P G P V + + +D
Sbjct: 13 VSALAALCVACCAQSPSTGNISVVKEIVDKLLKGYDVRLRPDFGGNPVTVGMSIHISSID 72
Query: 210 SIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKA 266
I E +M Y ++F Q+W+D RL LP N+T + R+ + +W PD++F N K
Sbjct: 73 QISEVNMDYTITMYFQQSWRDKRLAYNDLPLNLTLDNRVAD-----QLWLPDTYFLNDKK 127
Query: 267 VTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+T+ N + L+ D T+LY ++ A
Sbjct: 128 SFLHGVTVKNRMIRLHPDGTVLYGLRITTTA 158
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 14/62 (22%)
Query: 343 IPPNHQQAQRNLAQ-RARTRAIN-------------IDRFSRVFFPVLFAILNCTYWIMF 388
+P H A RN A R R R+ ID++SR+ FP+ F N YW+ +
Sbjct: 427 VPLTHHAAARNRANCRLRRRSSKLKLKIPDLTDVSTIDKWSRIIFPITFGFFNLVYWLYY 486
Query: 389 AE 390
Sbjct: 487 VN 488
>sp|Q17328|GLUCB_CAEEL Glutamate-gated chloride channel subunit beta OS=Caenorhabditis
elegans GN=glc-2 PE=1 SV=1
Length = 434
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 104/163 (63%), Gaps = 5/163 (3%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI--ELPQLQ 63
R++L SC M +YP D Q C+ + S +HT +D++++WDP P+ + + +LP
Sbjct: 154 RISLTSSCPMRLQLYPLDYQSCNFDLVSYAHTMNDIMYEWDPSTPVQLKPGVGSDLPNF- 212
Query: 64 LVKNKT--ADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
++KN T ADC+ +TG++ CL + + KR+ YYL Y PT +IVI+SWVSFWI
Sbjct: 213 ILKNYTTNADCTSHTNTGSYGCLRMQLLFKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLH 272
Query: 122 AAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
+ RV LGVT+LLT++T + A LPPVSY+K VD ++ AC
Sbjct: 273 STAGRVALGVTTLLTMTTMQSAINAKLPPVSYVKVVDVWLGAC 315
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 182 KLYD-KMRPP----KKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
K YD ++RPP EG V ++ + L ID +M Y+ + F + W D RL
Sbjct: 38 KNYDMRVRPPPANSSTEGAVN-VRVNIMIRMLSKIDVVNMEYSIQLTFREQWIDPRLAY- 95
Query: 237 ENMT--SEYRLLEVDWLK-NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
EN+ + L V +K ++W PD+FF KA + + N ++ +Y D ILY
Sbjct: 96 ENLGFYNPPAFLTVPHVKKSLWIPDTFFPTEKAAHRHLIDMENMFLRIYPDGKILY 151
>sp|P91730|GLUCB_HAECO Glutamate-gated chloride channel subunit beta OS=Haemonchus
contortus PE=2 SV=1
Length = 432
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 99/162 (61%), Gaps = 3/162 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI--ELPQLQ 63
R+++ SC M +YP D Q C + S +HT D++++WDP P+ + + +LP Q
Sbjct: 157 RISITSSCHMQLQLYPLDLQFCDFDLVSYAHTMKDIVYEWDPLAPVQLKPGVGSDLPNFQ 216
Query: 64 LVKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
L T D C+ +TG++ CL + LKR+ YYL Y PT +IVI+SWVSFWI +
Sbjct: 217 LTNITTNDDCTSHTNTGSYACLRMQLTLKRQFSYYLVQLYGPTTMIVIVSWVSFWIDMHS 276
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV LGVT+LLT++T A A LPPVSY+K VD ++ AC
Sbjct: 277 TAGRVALGVTTLLTMTTMQAAINAKLPPVSYVKVVDVWLGAC 318
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 174 NDILPEDPKLYD-KMRPPKKEGQ----PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+IL E YD ++RPP P V ++ + L ID +M Y+ + F + W
Sbjct: 32 QEILNELLSNYDMRVRPPPSNYSDPMGPVTVRVNIMIRMLSKIDVVNMEYSMQLTFREQW 91
Query: 229 KDHRLRLPE-NMTSEYRLLEVDWLK-NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKT 286
D RL + + L V +K N+W PD+FF KA + N ++ ++ D
Sbjct: 92 LDSRLAYAHLGYHNPPKFLTVPHIKSNLWIPDTFFPTEKAAHRHLIDTDNMFLRIHPDGK 151
Query: 287 ILY 289
+LY
Sbjct: 152 VLY 154
>sp|Q0II76|GBRR2_BOVIN Gamma-aminobutyric acid receptor subunit rho-2 OS=Bos taurus
GN=GABRR2 PE=2 SV=4
Length = 465
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 328
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 68 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSASNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAM 177
Score = 35.0 bits (79), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 20/80 (25%)
Query: 317 PEPAKQDKIF-------ELAAKENARLLTGQPMIPPNHQQAQRNLAQRARTRAINIDRFS 369
PE +QDKI E ++ LL GQ + R ID++S
Sbjct: 399 PEEERQDKIVVHLALSNESSSSRKKGLLKGQ-------------VGLRIFQNTHAIDKYS 445
Query: 370 RVFFPVLFAILNCTYWIMFA 389
R+ FP + N YW +FA
Sbjct: 446 RLIFPASYIFFNLIYWSVFA 465
>sp|P28476|GBRR2_HUMAN Gamma-aminobutyric acid receptor subunit rho-2 OS=Homo sapiens
GN=GABRR2 PE=2 SV=5
Length = 465
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT++T AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYL 328
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 68 MRPA--FGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
>sp|P47742|GBRR2_RAT Gamma-aminobutyric acid receptor subunit rho-2 OS=Rattus norvegicus
GN=Gabrr2 PE=1 SV=3
Length = 465
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+ ++LT+ST AS+P VSY++AVD ++
Sbjct: 291 PARVSLGIMTVLTMSTIITGVNASMPRVSYIRAVDIYL 328
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ W+D RL P +MT
Sbjct: 68 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSNRSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
Score = 36.6 bits (83), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 20/80 (25%)
Query: 317 PEPAKQDKIF-------ELAAKENARLLTGQPMIPPNHQQAQRNLAQRARTRAINIDRFS 369
PE +QDKI EL + LL GQ L T AI D++S
Sbjct: 399 PEEERQDKIVVHLALNSELTSSRKKGLLKGQ-----------MGLYIFQNTHAI--DKYS 445
Query: 370 RVFFPVLFAILNCTYWIMFA 389
R+ FP + + N YW +F+
Sbjct: 446 RLIFPAFYIVFNLIYWSVFS 465
>sp|P56476|GBRR2_MOUSE Gamma-aminobutyric acid receptor subunit rho-2 OS=Mus musculus
GN=Gabrr2 PE=2 SV=4
Length = 465
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAV 290
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+ ++LT+ST AS+P VSY++AVD ++
Sbjct: 291 PARVSLGIMTVLTMSTIITGVNASMPRVSYIRAVDIYL 328
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ W+D RL P ++MT
Sbjct: 68 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRL-----VKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
Score = 32.0 bits (71), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 20/80 (25%)
Query: 317 PEPAKQDKIF-------ELAAKENARLLTGQPMIPPNHQQAQRNLAQRARTRAINIDRFS 369
PE + D I EL + LL GQ L T AI D++S
Sbjct: 399 PEEERPDNIVVHLALNSELTSSRKKGLLKGQ-----------MGLYIFQNTHAI--DKYS 445
Query: 370 RVFFPVLFAILNCTYWIMFA 389
R+ FP + + N YW +F+
Sbjct: 446 RLIFPAFYIVFNLIYWSVFS 465
>sp|P56475|GBRR1_MOUSE Gamma-aminobutyric acid receptor subunit rho-1 OS=Mus musculus
GN=Gabrr1 PE=2 SV=2
Length = 480
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 192 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 251
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 252 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 311
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 312 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 349
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 89 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSSNNLSMTF 146
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 147 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 198
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 347 HQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFA 389
++ QR R ID++SR+ FP + + N YW +F+
Sbjct: 438 QRKGQRGSYVSMRINTHAIDKYSRIIFPAAYILFNLIYWSIFS 480
>sp|P24046|GBRR1_HUMAN Gamma-aminobutyric acid receptor subunit rho-1 OS=Homo sapiens
GN=GABRR1 PE=2 SV=2
Length = 479
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 191 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 250
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 251 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 310
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 311 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 348
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 88 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 145
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 146 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 197
Score = 35.4 bits (80), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 48/129 (37%), Gaps = 35/129 (27%)
Query: 293 FVFMALMEYCLVNIVLG---------------DSDLPKPPEPAKQDKIFELAA------- 330
FVF++++EY VN + S LP PP A D +
Sbjct: 354 FVFLSVLEYAAVNYLTTVQERKEQKLREKLPCTSGLP-PPRTAMLDGNYSDGEVNDLDNY 412
Query: 331 -KENAR---------LLTGQPMIPPNHQQAQRNLAQRARTRAINIDRFSRVFFPVLFAIL 380
EN L + P Q ++ R T AI D++SR+ FP + +
Sbjct: 413 MPENGEKPDRMMVQLTLASERSSPQRKSQRSSYVSMRIDTHAI--DKYSRIIFPAAYILF 470
Query: 381 NCTYWIMFA 389
N YW +F+
Sbjct: 471 NLIYWSIFS 479
>sp|P50572|GBRR1_RAT Gamma-aminobutyric acid receptor subunit rho-1 OS=Rattus norvegicus
GN=Gabrr1 PE=1 SV=2
Length = 480
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM-PLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 192 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 251
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 252 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 311
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV LG+T++LT+ST AS+P VSY+KAVD ++
Sbjct: 312 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 349
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 89 MRP--GFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 146
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL +K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 147 DGRL-----VKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 198
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 347 HQQAQRNLAQRARTRAINIDRFSRVFFPVLFAILNCTYWIMFA 389
+++QR R ID++SR+ FP + + N YW +F+
Sbjct: 438 QRKSQRGSYVSMRINTHAIDKYSRIIFPAAYILFNLIYWSIFS 480
>sp|Q9BLY8|GBRB_DROSI Gamma-aminobutyric acid receptor subunit beta OS=Drosophila
simulans GN=Rdl PE=2 SV=1
Length = 606
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP--LAVDEKIE 58
+T RLT+ SC MN +P D Q C +++ES +T D+ ++W+ E P + V ++
Sbjct: 173 ITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGPNSVGVSSEVS 231
Query: 59 LPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWI 118
LPQ +++ ++ +TGN++ L R +GYYL YIP+ LIV++SWVSFW+
Sbjct: 232 LPQFKVLGHRQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWL 291
Query: 119 KPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A PARV LGVT++LT++T + + A+LP +SY+K++D ++ C V
Sbjct: 292 NRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 339
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + V+ + S+ E M + D +F Q W D RL + E
Sbjct: 70 YDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVET 129
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +++KN+W PD+FF N K F T N ++ ++ +I ++ A
Sbjct: 130 LSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITA 183
Score = 35.4 bits (80), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMF 388
+ID++SR+ FPV F N YWI++
Sbjct: 565 DIDKYSRIVFPVCFVCFNLMYWIIY 589
>sp|Q75NA5|GBRB_MUSDO Gamma-aminobutyric acid receptor subunit beta OS=Musca domestica
GN=Rdl PE=1 SV=2
Length = 576
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP--LAVDEKIE 58
+T RLT+ SC MN +P D Q C +++ES +T D+ ++W+ E P + V ++
Sbjct: 171 ITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGPNSVGVSSEVS 229
Query: 59 LPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWI 118
LPQ +++ ++ +TGN++ L R +GYYL YIP+ LIV++SWVSFW+
Sbjct: 230 LPQFKVLGHRQRAVEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVVISWVSFWL 289
Query: 119 KPEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A PARV LGVT++LT++T + + A+LP +SY+K++D ++ C V
Sbjct: 290 NRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 337
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + V+ + S+ E M + D +F Q W D RL + E
Sbjct: 68 YDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVET 127
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +++KN+W PD+FF N K F T N ++ ++ +I ++ A
Sbjct: 128 LSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITA 181
Score = 35.4 bits (80), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMF 388
+ID++SR+ FPV F N YWI++
Sbjct: 534 DIDKYSRIVFPVCFVCFNLMYWIIY 558
>sp|P25123|GBRB_DROME Gamma-aminobutyric acid receptor subunit beta OS=Drosophila
melanogaster GN=Rdl PE=2 SV=3
Length = 606
Score = 128 bits (322), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 103/167 (61%), Gaps = 1/167 (0%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIEL 59
+T RLT+ SC MN +P D Q C +++ES +T D+ + W D + + ++EL
Sbjct: 173 ITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVEL 232
Query: 60 PQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIK 119
PQ +++ ++ +TGN++ L R +GYYL YIP+ LIVI+SWVSFW+
Sbjct: 233 PQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLN 292
Query: 120 PEAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTV 166
A PARV LGVT++LT++T + + A+LP +SY+K++D ++ C V
Sbjct: 293 RNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 339
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + V+ + S+ E M + D +F Q W D RL + E
Sbjct: 70 YDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDPRLAYRKRPGVET 129
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +++KN+W PD+FF N K F T N ++ ++ +I ++ A
Sbjct: 130 LSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITA 183
Score = 35.4 bits (80), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMF 388
+ID++SR+ FPV F N YWI++
Sbjct: 565 DIDKYSRIVFPVCFVCFNLMYWIIY 589
>sp|A8MPY1|GBRR3_HUMAN Gamma-aminobutyric acid receptor subunit rho-3 OS=Homo sapiens
GN=GABRR3 PE=2 SV=2
Length = 467
Score = 128 bits (321), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 100/159 (62%), Gaps = 4/159 (2%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++ DDL+ W L +E + L Q
Sbjct: 177 RITVSAMCFMDFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNKSLNTEEHMSLSQF-F 235
Query: 65 VKNKTADCSQVY--STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+++ +A + STG + L + FVL+R + +++ TY P L+V++SWVSFWI A
Sbjct: 236 IEDFSASSGLAFYSSTGWYNRLFINFVLRRHVFFFVLQTYFPAILMVMLSWVSFWIDRRA 295
Query: 123 APARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSYLKAVD ++
Sbjct: 296 VPARVSLGITTVLTMSTIITAVSASMPQVSYLKAVDVYL 334
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 190 PKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTSEYRL 245
P G P V V V +DSI E +M + + WKD RL P ++MT ++RL
Sbjct: 76 PGFGGSPVPVGIDVHVESIDSISETNMDFTMTFYLRHYWKDERLSFPSTANKSMTFDHRL 135
Query: 246 LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ +W PD FF ++K T+ N + ++ D +L ++ A+
Sbjct: 136 -----TRKIWVPDIFFVHSKRSFIHDTTMENIMLRVHPDGNVLLSLRITVSAM 183
>sp|P50573|GBRR3_RAT Gamma-aminobutyric acid receptor subunit rho-3 OS=Rattus norvegicus
GN=Gabrr3 PE=1 SV=1
Length = 464
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++ +DL+ W L +E I L Q +
Sbjct: 174 RITVSAMCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKHGNKSLNTEEHISLSQFFI 233
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ + YS TG + L + FVL+R + +++ TY P L+V++SWVSFWI A
Sbjct: 234 EEFSASSGLAFYSSTGWYYRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAV 293
Query: 124 PARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFM 161
PARV+LG+T++LT+ST AS+P VSY+KAVD +M
Sbjct: 294 PARVSLGITTVLTMSTIVTGVSASMPQVSYVKAVDVYM 331
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENM 239
+D P G P V V V +DSI E +M + + WKD RL P ++M
Sbjct: 67 HDFSTRPGFGGSPVPVGIDVQVESIDSISEVNMDFTMTFYLRHYWKDERLSFPSTTNKSM 126
Query: 240 TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
T + RL++ +W PD FF ++K T+ N + ++ D +L+ ++ A+
Sbjct: 127 TFDRRLIQ-----KIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGNVLFSLRITVSAM 180
>sp|Q09453|GLRB4_CAEEL Glycine receptor subunit beta-type 4 OS=Caenorhabditis elegans
GN=ggr-1 PE=3 SV=2
Length = 473
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 96/159 (60%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L + C + YP D+Q C L++ S ++ + LI +W+ P+ V+ I +P + L
Sbjct: 159 RISLTVLCMQDLARYPLDSQNCGLRILSYAYDEEQLIIRWNGGNPVEVNRGIRMPDMHLK 218
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K Y+TG ++ F + R + +++ +YIPT LIVI+SW SFW+ EA P
Sbjct: 219 HIKFYTKRDKYATGIWSSAVAEFHVDREITHHIIQSYIPTSLIVIISWFSFWLDVEAVPG 278
Query: 126 RVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSAC 164
RV+L +T+LLTL+TQ + ++ +LP S +KA+D +M C
Sbjct: 279 RVSLSITTLLTLATQSSAARMALPQASDVKAIDVWMGTC 317
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 177 LPEDPKLYDKMRPPKKEGQ-------------PTIVYFHVTVMGLDSIDENSMTYAADIF 223
+ ED K+ D R K+ G T V + + G+ S SM + DI+
Sbjct: 33 IEEDFKIDDVTRILKRVGNYNRNAYPLLDQDLATHVDIQMYIEGMSSFHAQSMDFQVDIY 92
Query: 224 FAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYK 283
F + W DHRL+ N T + + +W PD +F NA+ +F +T PN VW+Y
Sbjct: 93 FQEKWVDHRLQ--HNNTKRILVKDPKLFGLLWHPDLYFANARTASFHDVTQPNFLVWIYP 150
Query: 284 DKTILY 289
+ T+ Y
Sbjct: 151 NGTVWY 156
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 327 ELAAKENARLLTGQPMIPPNHQQA---QRNLAQRARTRAINIDRFSRVFFPVLFAILNCT 383
E+ A L + ++P + ++ + N + R A IDR+SR FP+ F I N
Sbjct: 396 EVREMNQASLFVRRSLLPTSKRKTIEDRINRVEENRKNAQKIDRYSRALFPLAFIIFNIF 455
Query: 384 YWIMFAEF 391
YWI + ++
Sbjct: 456 YWIYYLKY 463
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,102,831
Number of Sequences: 539616
Number of extensions: 5742438
Number of successful extensions: 16899
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 16121
Number of HSP's gapped (non-prelim): 583
length of query: 392
length of database: 191,569,459
effective HSP length: 119
effective length of query: 273
effective length of database: 127,355,155
effective search space: 34767957315
effective search space used: 34767957315
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)