Your job contains 1 sequence.
>psy5854
MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP
QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP
EAAPARVTLGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPED
PKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMT
SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALME
YCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARLLTGQPMIPPNHQQAQRNLAQRART
RAINIDRFSRVFFPVLFAILNCTYWIMFAEFL
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5854
(392 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0003011 - symbol:ort "ora transientless" species:7... 682 3.2e-85 3
FB|FBgn0037950 - symbol:HisCl1 "Histamine-gated chloride ... 525 4.8e-60 2
UNIPROTKB|E2R7P3 - symbol:GLRA3 "Uncharacterized protein"... 409 1.6e-47 3
UNIPROTKB|J9P291 - symbol:GLRA3 "Uncharacterized protein"... 409 1.6e-47 3
UNIPROTKB|F1Q2X8 - symbol:GLRA3 "Uncharacterized protein"... 409 1.6e-47 3
MGI|MGI:95749 - symbol:Glra3 "glycine receptor, alpha 3 s... 409 1.6e-47 3
RGD|621229 - symbol:Glra3 "glycine receptor, alpha 3" spe... 409 1.6e-47 3
UNIPROTKB|F1MNR0 - symbol:GLRA3 "Uncharacterized protein"... 409 1.6e-47 3
UNIPROTKB|F1RJ16 - symbol:GLRA3 "Uncharacterized protein"... 409 1.6e-47 3
UNIPROTKB|E1BTB5 - symbol:GLRA2 "Uncharacterized protein"... 404 5.3e-47 3
ZFIN|ZDB-GENE-020402-2 - symbol:glra4b "glycine receptor,... 404 6.8e-47 3
UNIPROTKB|G5E5K0 - symbol:GLRA2 "Uncharacterized protein"... 403 8.6e-47 3
UNIPROTKB|F6Y3F7 - symbol:GLRA2 "Uncharacterized protein"... 403 8.6e-47 3
UNIPROTKB|P23416 - symbol:GLRA2 "Glycine receptor subunit... 403 8.6e-47 3
MGI|MGI:95748 - symbol:Glra2 "glycine receptor, alpha 2 s... 403 8.6e-47 3
RGD|2705 - symbol:Glra2 "glycine receptor, alpha 2" speci... 403 8.6e-47 3
UNIPROTKB|P22771 - symbol:Glra2 "Glycine receptor subunit... 403 8.6e-47 3
UNIPROTKB|F1SQV0 - symbol:GLRA2 "Uncharacterized protein"... 403 8.6e-47 3
UNIPROTKB|K7GSI6 - symbol:GLRA2 "Uncharacterized protein"... 403 8.6e-47 3
ZFIN|ZDB-GENE-010410-3 - symbol:glra4a "glycine receptor,... 399 2.3e-46 3
UNIPROTKB|F1NEM1 - symbol:GLRA4 "Uncharacterized protein"... 391 2.0e-45 3
ZFIN|ZDB-GENE-991117-1 - symbol:glra1 "glycine receptor, ... 386 2.0e-45 3
UNIPROTKB|E2RCM7 - symbol:GLRA4 "Uncharacterized protein"... 389 2.5e-45 3
UNIPROTKB|F1RYC5 - symbol:LOC100525376 "Uncharacterized p... 388 3.2e-45 3
RGD|2704 - symbol:Glra1 "glycine receptor, alpha 1" speci... 381 3.2e-45 3
UNIPROTKB|E9PT06 - symbol:Glra1 "Glycine receptor subunit... 381 3.2e-45 3
UNIPROTKB|P57695 - symbol:GLRA1 "Glycine receptor subunit... 381 3.2e-45 3
UNIPROTKB|F1RQB7 - symbol:GLRA1 "Uncharacterized protein"... 381 3.2e-45 3
UNIPROTKB|F1PC16 - symbol:GLRA1 "Uncharacterized protein"... 381 3.2e-45 3
UNIPROTKB|P23415 - symbol:GLRA1 "Glycine receptor subunit... 381 3.2e-45 3
MGI|MGI:95747 - symbol:Glra1 "glycine receptor, alpha 1 s... 381 3.2e-45 3
UNIPROTKB|Q14C71 - symbol:GLRA1 "GLRA1 protein" species:9... 381 3.2e-45 3
UNIPROTKB|E1BHI1 - symbol:GLRA4 "Uncharacterized protein"... 386 5.1e-45 3
MGI|MGI:95750 - symbol:Glra4 "glycine receptor, alpha 4 s... 386 6.5e-45 3
RGD|1564103 - symbol:Glra4 "glycine receptor, alpha 4" sp... 386 6.5e-45 3
UNIPROTKB|O75311 - symbol:GLRA3 "Glycine receptor subunit... 411 1.2e-43 2
ZFIN|ZDB-GENE-010410-2 - symbol:glrba "gylcine receptor, ... 365 8.7e-42 3
ZFIN|ZDB-GENE-020402-1 - symbol:glra3 "glycine receptor, ... 393 1.5e-41 2
FB|FBgn0024963 - symbol:GluClalpha "GluClalpha" species:7... 355 1.8e-41 3
UNIPROTKB|F1NH12 - symbol:GLRA1 "Uncharacterized protein"... 381 3.2e-41 2
UNIPROTKB|Q9GJS9 - symbol:GLRB "Glycine receptor subunit ... 362 3.7e-41 3
UNIPROTKB|E2QS67 - symbol:GLRB "Uncharacterized protein" ... 362 3.7e-41 3
UNIPROTKB|P48167 - symbol:GLRB "Glycine receptor subunit ... 362 3.7e-41 3
MGI|MGI:95751 - symbol:Glrb "glycine receptor, beta subun... 362 3.7e-41 3
RGD|2706 - symbol:Glrb "glycine receptor, beta" species:1... 362 3.7e-41 3
UNIPROTKB|E2QZJ3 - symbol:GLRA2 "Uncharacterized protein"... 403 4.1e-41 2
UNIPROTKB|E7EV50 - symbol:GABRB2 "Gamma-aminobutyric acid... 313 4.7e-41 3
UNIPROTKB|F1P037 - symbol:GLRB "Uncharacterized protein" ... 358 7.5e-41 3
UNIPROTKB|P0C2W5 - symbol:GABRB2 "Gamma-aminobutyric acid... 313 1.3e-40 3
UNIPROTKB|F1NMN1 - symbol:GLRA3 "Uncharacterized protein"... 382 1.4e-40 2
UNIPROTKB|L7N0C0 - symbol:GABRB2 "Uncharacterized protein... 313 1.5e-40 3
RGD|2650 - symbol:Gabrb2 "gamma-aminobutyric acid (GABA) ... 313 1.5e-40 3
UNIPROTKB|F1NB54 - symbol:GABRB2 "Uncharacterized protein... 308 7.5e-40 3
UNIPROTKB|P47870 - symbol:GABRB2 "Gamma-aminobutyric acid... 313 7.9e-40 3
MGI|MGI:95620 - symbol:Gabrb2 "gamma-aminobutyric acid (G... 313 7.9e-40 3
UNIPROTKB|E1BFC0 - symbol:GABRB2 "Gamma-aminobutyric acid... 313 9.9e-40 3
ZFIN|ZDB-GENE-090313-230 - symbol:si:dkey-20i10.4 "si:dke... 318 3.1e-39 3
UNIPROTKB|Q5JXX5 - symbol:GLRA4 "Glycine receptor subunit... 386 3.2e-39 2
UNIPROTKB|B7Z279 - symbol:GABRB2 "Gamma-aminobutyric acid... 295 3.5e-39 3
UNIPROTKB|E1BW41 - symbol:LOC100858201 "Uncharacterized p... 308 4.4e-39 3
UNIPROTKB|J9P3X1 - symbol:GABRB3 "Uncharacterized protein... 312 5.6e-39 3
UNIPROTKB|F1LRQ0 - symbol:Gabrb3 "Gamma-aminobutyric acid... 312 5.6e-39 3
UNIPROTKB|F5H3D2 - symbol:GABRB3 "Gamma-aminobutyric acid... 312 5.6e-39 3
UNIPROTKB|F5GXV5 - symbol:GABRB1 "Gamma-aminobutyric acid... 302 7.2e-39 3
UNIPROTKB|F1PEG2 - symbol:GABRB1 "Uncharacterized protein... 302 7.2e-39 3
UNIPROTKB|F1MAU5 - symbol:GABRB3 "Uncharacterized protein... 312 9.1e-39 3
UNIPROTKB|F1MDL0 - symbol:GLRB "Glycine receptor subunit ... 339 1.2e-38 3
UNIPROTKB|P28472 - symbol:GABRB3 "Gamma-aminobutyric acid... 312 1.9e-38 3
MGI|MGI:95621 - symbol:Gabrb3 "gamma-aminobutyric acid (G... 312 1.9e-38 3
RGD|2651 - symbol:Gabrb3 "gamma-aminobutyric acid (GABA) ... 312 1.9e-38 3
UNIPROTKB|P19019 - symbol:GABRB3 "Gamma-aminobutyric acid... 308 2.3e-38 3
ZFIN|ZDB-GENE-030131-8196 - symbol:gabrb2 "gamma-aminobut... 314 2.7e-38 3
MGI|MGI:95619 - symbol:Gabrb1 "gamma-aminobutyric acid (G... 302 3.0e-38 3
UNIPROTKB|P18505 - symbol:GABRB1 "Gamma-aminobutyric acid... 302 4.9e-38 3
RGD|2649 - symbol:Gabrb1 "gamma-aminobutyric acid (GABA) ... 302 4.9e-38 3
UNIPROTKB|P08220 - symbol:GABRB1 "Gamma-aminobutyric acid... 302 6.2e-38 3
ZFIN|ZDB-GENE-101102-2 - symbol:gabrb3 "gamma-aminobutyri... 312 9.0e-38 3
ZFIN|ZDB-GENE-040801-106 - symbol:glrbb "glycine receptor... 364 1.2e-37 2
UNIPROTKB|F5H7N0 - symbol:GABRB3 "Gamma-aminobutyric acid... 312 1.7e-37 3
UNIPROTKB|F1NES7 - symbol:LOC100858201 "Uncharacterized p... 299 3.7e-37 3
WB|WBGene00001591 - symbol:glc-1 species:6239 "Caenorhabd... 341 8.2e-37 2
UNIPROTKB|P24045 - symbol:GABRB4 "Gamma-aminobutyric acid... 304 1.1e-36 3
FB|FBgn0010240 - symbol:Lcch3 "Ligand-gated chloride chan... 313 1.5e-36 3
ZFIN|ZDB-GENE-070424-211 - symbol:si:dkey-169l5.3 "si:dke... 304 2.5e-36 3
WB|WBGene00000233 - symbol:avr-15 species:6239 "Caenorhab... 348 4.5e-36 2
WB|WBGene00001512 - symbol:gab-1 species:6239 "Caenorhabd... 310 6.8e-36 3
WB|WBGene00001592 - symbol:glc-2 species:6239 "Caenorhabd... 323 9.4e-36 3
UNIPROTKB|F1PKC7 - symbol:GABRB2 "Uncharacterized protein... 257 3.1e-35 3
UNIPROTKB|F1RR58 - symbol:GABRB2 "Uncharacterized protein... 255 5.0e-35 3
WB|WBGene00000232 - symbol:avr-14 species:6239 "Caenorhab... 316 1.7e-34 3
UNIPROTKB|E2R4R7 - symbol:GABRR2 "Uncharacterized protein... 285 2.1e-34 3
UNIPROTKB|F1MBQ3 - symbol:GABRR2 "Gamma-aminobutyric acid... 285 3.4e-34 3
UNIPROTKB|G5E635 - symbol:GABRR2 "Gamma-aminobutyric acid... 285 3.4e-34 3
WB|WBGene00017389 - symbol:lgc-38 species:6239 "Caenorhab... 318 1.1e-33 2
UNIPROTKB|B7ZBQ7 - symbol:GABRR1 "Gamma-aminobutyric acid... 277 1.4e-33 3
ZFIN|ZDB-GENE-060825-164 - symbol:gabrr2a "gamma-aminobut... 291 3.5e-33 3
UNIPROTKB|E1BCQ5 - symbol:GABRR1 "Uncharacterized protein... 277 3.7e-33 3
UNIPROTKB|F1S0D1 - symbol:GABRR1 "Uncharacterized protein... 277 3.7e-33 3
UNIPROTKB|Q0II76 - symbol:GABRR2 "Gamma-aminobutyric acid... 285 4.1e-33 3
ZFIN|ZDB-GENE-111215-5 - symbol:gabrb2l "gamma-aminobutyr... 313 4.9e-33 2
WARNING: Descriptions of 231 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0003011 [details] [associations]
symbol:ort "ora transientless" species:7227 "Drosophila
melanogaster" [GO:0019182 "histamine-gated chloride channel
activity" evidence=ISS;NAS] [GO:0019183 "histamine-gated chloride
channel complex" evidence=NAS] [GO:0007268 "synaptic transmission"
evidence=IMP] [GO:0045472 "response to ether" evidence=IMP]
[GO:0009636 "response to toxic substance" evidence=IMP] [GO:0030534
"adult behavior" evidence=IMP] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0043052
"thermotaxis" evidence=IMP] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0007268
GO:GO:0009636 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030534 GO:GO:0043052
GO:GO:0045472 eggNOG:NOG295166 InterPro:IPR015680
PANTHER:PTHR18945:SF26 ChiTaRS:oc EMBL:AY672639
ProteinModelPortal:A1KYB3 SMR:A1KYB3 STRING:A1KYB3 PRIDE:A1KYB3
FlyBase:FBgn0003011 InParanoid:A1KYB3 OrthoDB:EOG4F4QSD Bgee:A1KYB3
GO:GO:0019182 Uniprot:A1KYB3
Length = 485
Score = 682 (245.1 bits), Expect = 3.2e-85, Sum P(3) = 3.2e-85
Identities = 125/161 (77%), Positives = 137/161 (85%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTLKLSC MNF IYPHDTQEC LQ+ESLSHTTDDLIFQWDP PL VDE IELPQ+ L+
Sbjct: 148 KLTLKLSCIMNFAIYPHDTQECKLQVESLSHTTDDLIFQWDPTTPLVVDENIELPQVALI 207
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
+N+TADC+QVYSTGNFTCLEV+F LKRRL YY+F+TYIPTC+IVIMSWVSFWIKPEAAPA
Sbjct: 208 RNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPA 267
Query: 126 RXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
R QHAKSQ+SLPPVSYLKAVDAFMS CTV
Sbjct: 268 RVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTV 308
Score = 629 (226.5 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 117/143 (81%), Positives = 124/143 (86%)
Query: 170 SLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
SL DILPED K YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTY AD+FFAQTWK
Sbjct: 26 SLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
Query: 230 DHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
DHRLRLPENMT EYRLLEVDWLKNMWRPDSFFKNAK+VTFQTMTIPNHY+WLYKDKTILY
Sbjct: 86 DHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
Query: 290 MVKFVFMALMEYCLVNIVLGDSD 312
MVK + L C++N + D
Sbjct: 146 MVK---LTLKLSCIMNFAIYPHD 165
Score = 110 (43.8 bits), Expect = 3.2e-85, Sum P(3) = 3.2e-85
Identities = 22/35 (62%), Positives = 26/35 (74%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKP----PEPAKQD 323
FVFMALMEYCL+NIVL D+ +PKP P+P D
Sbjct: 309 FVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGD 343
Score = 93 (37.8 bits), Expect = 3.2e-85, Sum P(3) = 3.2e-85
Identities = 19/30 (63%), Positives = 21/30 (70%)
Query: 363 INIDRFSRVFFPVLFAILNCTYWIMFAEFL 392
I IDR SRV FP LFA LN YW +F E+L
Sbjct: 456 IYIDRSSRVLFPALFASLNGIYWCVFYEYL 485
>FB|FBgn0037950 [details] [associations]
symbol:HisCl1 "Histamine-gated chloride channel subunit 1"
species:7227 "Drosophila melanogaster" [GO:0016933
"extracellular-glycine-gated ion channel activity" evidence=ISS]
[GO:0019182 "histamine-gated chloride channel activity"
evidence=NAS] [GO:0019183 "histamine-gated chloride channel
complex" evidence=NAS] [GO:0006811 "ion transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0043052 "thermotaxis"
evidence=IMP] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 GO:GO:0043052 HSSP:P23415
InterPro:IPR015680 PANTHER:PTHR18945:SF26 FlyBase:FBgn0037950
EMBL:AF467953 ProteinModelPortal:Q8T9R9 SMR:Q8T9R9 STRING:Q8T9R9
PRIDE:Q8T9R9 InParanoid:Q8T9R9 OrthoDB:EOG41G1KM
ArrayExpress:Q8T9R9 Bgee:Q8T9R9 Uniprot:Q8T9R9
Length = 426
Score = 525 (189.9 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 95/161 (59%), Positives = 120/161 (74%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
+LTL L CA+ F YPHDTQ CS+ +ESLSHT +DL+F W+ PL V+ +IELPQL +
Sbjct: 175 KLTLVLWCALKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQLDIS 234
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
N T DC+ YSTGNFTCL ++F L+RRLGY+LFHTYIP+ LIV+MSW+SFWIKPEA PA
Sbjct: 235 NNYTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPA 294
Query: 126 RXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
R Q+ +SQ SLPPVSY+KA+D +MS+C+V
Sbjct: 295 RVTVGVTSLLTLATQNTQSQQSLPPVSYVKAIDIWMSSCSV 335
Score = 445 (161.7 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 81/134 (60%), Positives = 101/134 (75%)
Query: 169 TSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+SL+ DILP K YDK R PK GQPT+VY HVTV+ LDSI+E SMTY DIF AQ+W
Sbjct: 52 SSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYLHVTVLSLDSINEESMTYVTDIFLAQSW 111
Query: 229 KDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTIL 288
+D R RLPENM+ +YR+L+VDWL ++WR D FFKNAK VTF M+IPNHY+W+Y DKT+
Sbjct: 112 RDPRPRLPENMSEQYRILDVDWLHSIWRADCFFKNAKKVTFHEMSIPNHYIWVYHDKTLF 171
Query: 289 YMVKFVFMALMEYC 302
YM K + L+ +C
Sbjct: 172 YMSK---LTLVLWC 182
Score = 108 (43.1 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 31/96 (32%), Positives = 45/96 (46%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARLLTGQPMIPPNHXXXXX 352
FVF++LME+ +VN +G K + + I +L ++A + +I P +
Sbjct: 336 FVFLSLMEFAVVNNFMGPV-ATKAMKGYSDENISDLDDLKSALQHHRESIIEPQYDTFCH 394
Query: 353 XXXXXXXXXXINIDRFSRVFFPVLFAILNCTYWIMF 388
I ID+FSR FFP F ILN YW F
Sbjct: 395 GHATA-----IYIDKFSRFFFPFSFFILNIVYWTTF 425
>UNIPROTKB|E2R7P3 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 KO:K05195
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:8001
OMA:PKNSDEM EMBL:AAEX03014316 RefSeq:XP_543200.2
ProteinModelPortal:E2R7P3 Ensembl:ENSCAFT00000012633 GeneID:486074
KEGG:cfa:486074 NextBio:20859920 Uniprot:E2R7P3
Length = 464
Score = 409 (149.0 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 79/160 (49%), Positives = 105/160 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 161 (61.7 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 42/138 (30%), Positives = 61/138 (44%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K D+ S S S F D L YD P +G P V ++ + SI E
Sbjct: 29 KETDSARSRSAPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAET 87
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E L + L ++W+PD FF N K F +T
Sbjct: 88 TMDYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTT 146
Query: 275 PNHYVWLYKDKTILYMVK 292
N + ++K+ +LY ++
Sbjct: 147 DNKLLRIFKNGNVLYSIR 164
Score = 66 (28.3 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YW+++
Sbjct: 428 IDTISRACFPLAFLIFNIFYWVIY 451
Score = 50 (22.7 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 326 FVFSALLEYAAVNFV 340
>UNIPROTKB|J9P291 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 KO:K05195
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:8001
EMBL:AAEX03014316 GeneID:486074 KEGG:cfa:486074
RefSeq:XP_003433410.1 Ensembl:ENSCAFT00000049653 Uniprot:J9P291
Length = 449
Score = 409 (149.0 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 79/160 (49%), Positives = 105/160 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 161 (61.7 bits), Expect = 4.3e-13, Sum P(3) = 4.3e-13
Identities = 42/138 (30%), Positives = 61/138 (44%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K D+ S S S F D L YD P +G P V ++ + SI E
Sbjct: 29 KETDSARSRSAPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAET 87
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E L + L ++W+PD FF N K F +T
Sbjct: 88 TMDYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTT 146
Query: 275 PNHYVWLYKDKTILYMVK 292
N + ++K+ +LY ++
Sbjct: 147 DNKLLRIFKNGNVLYSIR 164
Score = 66 (28.3 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YW+++
Sbjct: 413 IDTISRACFPLAFLIFNIFYWVIY 436
Score = 50 (22.7 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 326 FVFSALLEYAAVNFV 340
>UNIPROTKB|F1Q2X8 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 EMBL:AAEX03014316
Ensembl:ENSCAFT00000012641 Ensembl:ENSCAFT00000043558
Uniprot:F1Q2X8
Length = 409
Score = 409 (149.0 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 79/160 (49%), Positives = 105/160 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 124 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 183
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 184 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 243
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 244 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 283
Score = 158 (60.7 bits), Expect = 5.8e-13, Sum P(3) = 5.8e-13
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E
Sbjct: 17 YDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSL 76
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L + L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 77 DL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 124
Score = 66 (28.3 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YW+++
Sbjct: 373 IDTISRACFPLAFLIFNIFYWVIY 396
Score = 50 (22.7 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 286 FVFSALLEYAAVNFV 300
>MGI|MGI:95749 [details] [associations]
symbol:Glra3 "glycine receptor, alpha 3 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
MGI:MGI:95749 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0034707
HOVERGEN:HBG051707 eggNOG:NOG265706 KO:K05195 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 CTD:8001
EMBL:AF362764 EMBL:AY230204 IPI:IPI00380761 RefSeq:NP_536686.2
UniGene:Mm.307061 ProteinModelPortal:Q91XP5 SMR:Q91XP5
STRING:Q91XP5 PhosphoSite:Q91XP5 PaxDb:Q91XP5 PRIDE:Q91XP5
DNASU:110304 GeneID:110304 KEGG:mmu:110304 UCSC:uc009ujb.2
InParanoid:Q91XP5 NextBio:363729 Bgee:Q91XP5 CleanEx:MM_GLRA3
Genevestigator:Q91XP5 GermOnline:ENSMUSG00000038257 Uniprot:Q91XP5
Length = 464
Score = 409 (149.0 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 79/160 (49%), Positives = 105/160 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 158 (60.7 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E
Sbjct: 57 YDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSL 116
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L + L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 117 DL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
Score = 66 (28.3 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YW+++
Sbjct: 428 IDTISRACFPLAFLIFNIFYWVIY 451
Score = 50 (22.7 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 326 FVFSALLEYAAVNFV 340
>RGD|621229 [details] [associations]
symbol:Glra3 "glycine receptor, alpha 3" species:10116 "Rattus
norvegicus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IDA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008130 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676
PROSITE:PS00236 RGD:621229 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0034707
HOVERGEN:HBG051707 eggNOG:NOG265706 GO:GO:0016594 GO:GO:0022824
EMBL:M55250 IPI:IPI00392219 PIR:A23682 UniGene:Rn.10038
ProteinModelPortal:P24524 SMR:P24524 BindingDB:P24524
ChEMBL:CHEMBL2677 Genevestigator:P24524 Uniprot:P24524
Length = 464
Score = 409 (149.0 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 79/160 (49%), Positives = 105/160 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 323
Score = 158 (60.7 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E
Sbjct: 57 YDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSL 116
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L + L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 117 DL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR 164
Score = 66 (28.3 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YW+++
Sbjct: 428 IDTISRACFPLAFLIFNIFYWVIY 451
Score = 50 (22.7 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 326 FVFSALLEYAAVNFV 340
>UNIPROTKB|F1MNR0 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:PKNSDEM EMBL:DAAA02021900
EMBL:DAAA02021901 IPI:IPI00923967 Ensembl:ENSBTAT00000061342
Uniprot:F1MNR0
Length = 375
Score = 409 (149.0 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 79/160 (49%), Positives = 105/160 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 77 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 136
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 137 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 196
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 197 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 236
Score = 123 (48.4 bits), Expect = 5.4e-09, Sum P(3) = 5.4e-09
Identities = 25/78 (32%), Positives = 38/78 (48%)
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
S Y +IF Q W D RL E L + L ++W+PD FF N K F +T
Sbjct: 1 SQDYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTT 59
Query: 275 PNHYVWLYKDKTILYMVK 292
N + ++K+ +LY ++
Sbjct: 60 DNKLLRIFKNGNVLYSIR 77
Score = 66 (28.3 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YW+++
Sbjct: 341 IDTISRACFPLAFLIFNIFYWVIY 364
Score = 50 (22.7 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 239 FVFSALLEYAAVNFV 253
>UNIPROTKB|F1RJ16 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:PKNSDEM EMBL:CT737274 EMBL:CT841549
Ensembl:ENSSSCT00000010633 Uniprot:F1RJ16
Length = 376
Score = 409 (149.0 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 79/160 (49%), Positives = 105/160 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 76 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 135
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 136 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 195
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 196 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 235
Score = 120 (47.3 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 218 YAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNH 277
Y +IF Q W D RL E L + L ++W+PD FF N K F +T N
Sbjct: 3 YRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNK 61
Query: 278 YVWLYKDKTILYMVK 292
+ ++K+ +LY ++
Sbjct: 62 LLRIFKNGNVLYSIR 76
Score = 66 (28.3 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YW+++
Sbjct: 340 IDTISRACFPLAFLIFNVFYWVIY 363
Score = 50 (22.7 bits), Expect = 1.6e-47, Sum P(3) = 1.6e-47
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 238 FVFSALLEYAAVNFV 252
>UNIPROTKB|E1BTB5 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218
GO:GO:0016934 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OMA:TTLFAFF EMBL:AADN02011338
EMBL:AADN02011339 EMBL:AADN02011340 EMBL:AADN02011341
IPI:IPI00575771 RefSeq:XP_003640566.1 Ensembl:ENSGALT00000026747
GeneID:772019 KEGG:gga:772019 Uniprot:E1BTB5
Length = 452
Score = 404 (147.3 bits), Expect = 5.3e-47, Sum P(3) = 5.3e-47
Identities = 78/160 (48%), Positives = 107/160 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EDKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 151 (58.2 bits), Expect = 7.1e-12, Sum P(3) = 7.1e-12
Identities = 34/109 (31%), Positives = 50/109 (45%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E
Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L + L ++W+PD FF N K F +T N + + K +LY ++
Sbjct: 118 DL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSIR 165
Score = 66 (28.3 bits), Expect = 5.3e-47, Sum P(3) = 5.3e-47
Identities = 17/61 (27%), Positives = 21/61 (34%)
Query: 328 LAAKENARLLTGQPMIPPNHXXXXXXXXXXXXXXXINIDRFSRVFFPVLFAILNCTYWIM 387
L K+ + P PP ID SR FP+ F I N YWI
Sbjct: 381 LQVKDGTAVKATPPNPPPAPPKDSDSIKKKFVDRAKRIDTISRAAFPLAFLIFNIFYWIT 440
Query: 388 F 388
+
Sbjct: 441 Y 441
Score = 50 (22.7 bits), Expect = 5.3e-47, Sum P(3) = 5.3e-47
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 327 FVFAALLEYAAVNFV 341
>ZFIN|ZDB-GENE-020402-2 [details] [associations]
symbol:glra4b "glycine receptor, alpha 4b"
species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 ZFIN:ZDB-GENE-020402-2 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 EMBL:BX470076 IPI:IPI00998123
ProteinModelPortal:F1QTT1 Ensembl:ENSDART00000006474
ArrayExpress:F1QTT1 Uniprot:F1QTT1
Length = 537
Score = 404 (147.3 bits), Expect = 6.8e-47, Sum P(3) = 6.8e-47
Identities = 79/160 (49%), Positives = 106/160 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P DTQ C++Q+ES +T +DLIFQW E P+ V + + LPQ L
Sbjct: 209 RLTLILSCPMDLKNFPMDTQTCTMQLESFGYTMNDLIFQWLDEGPVQVADDLMLPQFVLK 268
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ L VI+SWVSFWI +AAP
Sbjct: 269 EEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLTVILSWVSFWINMDAAP 328
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 329 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 368
Score = 154 (59.3 bits), Expect = 9.4e-12, Sum P(3) = 9.4e-12
Identities = 32/113 (28%), Positives = 53/113 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y ++F Q W D RL E
Sbjct: 102 YDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYKEYPDDSL 161
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L + L ++W+PD FF N K F +T N + ++++ +LY ++ +
Sbjct: 162 DL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLI 213
Score = 65 (27.9 bits), Expect = 6.8e-47, Sum P(3) = 6.8e-47
Identities = 16/57 (28%), Positives = 22/57 (38%)
Query: 332 ENARLLTGQPMIPPNHXXXXXXXXXXXXXXXINIDRFSRVFFPVLFAILNCTYWIMF 388
E A + G +PP H ID SR FP+ F + N YW+ +
Sbjct: 472 EAAAMFAG---LPPGHALFDIRRRFVEQAK--RIDTISRAVFPLSFLVFNVFYWVTY 523
Score = 50 (22.7 bits), Expect = 6.8e-47, Sum P(3) = 6.8e-47
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 371 FVFAALLEYAAVNFV 385
>UNIPROTKB|G5E5K0 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007218 "neuropeptide signaling pathway" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008129 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675
PROSITE:PS00236 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0016934
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824 CTD:2742
KO:K05194 OMA:TTLFAFF EMBL:DAAA02074899 EMBL:DAAA02074900
RefSeq:NP_001179843.1 UniGene:Bt.74452 ProteinModelPortal:G5E5K0
Ensembl:ENSBTAT00000022869 GeneID:537660 KEGG:bta:537660
NextBio:20877182 Uniprot:G5E5K0
Length = 452
Score = 403 (146.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 78/160 (48%), Positives = 106/160 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 153 (58.9 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 34/109 (31%), Positives = 51/109 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E
Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L + L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 118 DL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
Score = 65 (27.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YWI +
Sbjct: 418 IDTISRAAFPLAFLIFNIFYWITY 441
Score = 50 (22.7 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 327 FVFAALLEYAAVNFV 341
>UNIPROTKB|F6Y3F7 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 CTD:2742 KO:K05194 OMA:TTLFAFF
Ensembl:ENSCAFT00000018822 EMBL:AAEX03026154 RefSeq:XP_003435502.1
RefSeq:XP_548866.2 ProteinModelPortal:F6Y3F7 GeneID:491746
KEGG:cfa:491746 Uniprot:F6Y3F7
Length = 452
Score = 403 (146.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 78/160 (48%), Positives = 106/160 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 153 (58.9 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 33/109 (30%), Positives = 51/109 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y +IF Q W D RL E
Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L + L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 118 DL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
Score = 65 (27.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YWI +
Sbjct: 418 IDTISRAAFPLAFLIFNIFYWITY 441
Score = 50 (22.7 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 327 FVFAALLEYAAVNFV 341
>UNIPROTKB|P23416 [details] [associations]
symbol:GLRA2 "Glycine receptor subunit alpha-2"
species:9606 "Homo sapiens" [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0007416 "synapse assembly" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=NAS] [GO:0006811 "ion transport"
evidence=IDA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IDA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IDA] [GO:0016594 "glycine binding"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
EMBL:U77731 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 EMBL:CH471074
GO:GO:0007416 GO:GO:0016934 DrugBank:DB00145 GO:GO:0034707
DrugBank:DB00898 HOVERGEN:HBG051707 eggNOG:NOG265706
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0022824 TCDB:1.A.9.3.1
EMBL:X52008 EMBL:AF053495 EMBL:AF053487 EMBL:AF053488 EMBL:AF053489
EMBL:AF053490 EMBL:AF053491 EMBL:AF053492 EMBL:AF053493
EMBL:AF053494 EMBL:AY437083 EMBL:AY437084 EMBL:CR450343
EMBL:AK289561 EMBL:AK297304 EMBL:AK312591 EMBL:AC003658
EMBL:AC003683 EMBL:BC032864 EMBL:U77724 EMBL:U77725 EMBL:U77726
EMBL:U77727 EMBL:U77728 EMBL:U77729 EMBL:U77730 IPI:IPI00011566
IPI:IPI00220450 PIR:S12381 RefSeq:NP_001112357.1
RefSeq:NP_001112358.1 RefSeq:NP_001165413.1 RefSeq:NP_002054.1
UniGene:Hs.2700 ProteinModelPortal:P23416 SMR:P23416 IntAct:P23416
MINT:MINT-1412636 STRING:P23416 PhosphoSite:P23416 DMDM:121578
PRIDE:P23416 DNASU:2742 Ensembl:ENST00000218075
Ensembl:ENST00000355020 Ensembl:ENST00000443437 GeneID:2742
KEGG:hsa:2742 UCSC:uc004cwe.4 UCSC:uc010nep.3 CTD:2742
GeneCards:GC0XP014457 H-InvDB:HIX0016955 HGNC:HGNC:4327 MIM:305990
neXtProt:NX_P23416 PharmGKB:PA28728 InParanoid:P23416 KO:K05194
OMA:TTLFAFF OrthoDB:EOG4WWRJJ PhylomeDB:P23416 BindingDB:P23416
ChEMBL:CHEMBL5871 ChiTaRS:GLRA2 GenomeRNAi:2742 NextBio:10808
ArrayExpress:P23416 Bgee:P23416 CleanEx:HS_GLRA2
Genevestigator:P23416 GermOnline:ENSG00000101958 Uniprot:P23416
Length = 452
Score = 403 (146.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 78/160 (48%), Positives = 106/160 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 153 (58.9 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 33/109 (30%), Positives = 51/109 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y +IF Q W D RL E
Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L + L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 118 DL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
Score = 65 (27.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YWI +
Sbjct: 418 IDTISRAAFPLAFLIFNIFYWITY 441
Score = 50 (22.7 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 327 FVFAALLEYAAVNFV 341
>MGI|MGI:95748 [details] [associations]
symbol:Glra2 "glycine receptor, alpha 2 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=ISO] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=ISO] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
MGI:MGI:95748 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416
GO:GO:0016934 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:BC056342
EMBL:BC068987 IPI:IPI00270265 RefSeq:NP_906272.1 UniGene:Mm.113877
ProteinModelPortal:Q7TNC8 SMR:Q7TNC8 STRING:Q7TNC8
PhosphoSite:Q7TNC8 PRIDE:Q7TNC8 Ensembl:ENSMUST00000058787
GeneID:237213 KEGG:mmu:237213 InParanoid:Q7TNC8 NextBio:383251
Bgee:Q7TNC8 CleanEx:MM_GLRA2 Genevestigator:Q7TNC8
GermOnline:ENSMUSG00000018589 Uniprot:Q7TNC8
Length = 452
Score = 403 (146.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 78/160 (48%), Positives = 106/160 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 153 (58.9 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 33/109 (30%), Positives = 51/109 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y +IF Q W D RL E
Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L + L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 118 DL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
Score = 65 (27.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YWI +
Sbjct: 418 IDTISRAAFPLAFLIFNIFYWITY 441
Score = 50 (22.7 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 327 FVFAALLEYAAVNFV 341
>RGD|2705 [details] [associations]
symbol:Glra2 "glycine receptor, alpha 2" species:10116 "Rattus
norvegicus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0006811 "ion transport" evidence=ISO] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA;ISO] [GO:0007416 "synapse assembly"
evidence=IEP] [GO:0016594 "glycine binding" evidence=IEA;ISO]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA;ISO;TAS] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673
PRINTS:PR01675 PROSITE:PS00236 RGD:2705 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416
GO:GO:0016934 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:X57281
EMBL:X61159 EMBL:AJ310837 IPI:IPI00210383 IPI:IPI00231543 PIR:S14816
PIR:S18836 RefSeq:NP_036700.1 RefSeq:XP_003752087.1 UniGene:Rn.10379
ProteinModelPortal:P22771 SMR:P22771 STRING:P22771
Ensembl:ENSRNOT00000004443 GeneID:100910572 GeneID:24397
KEGG:rno:100910572 KEGG:rno:24397 UCSC:RGD:2705 InParanoid:P22771
BindingDB:P22771 ChEMBL:CHEMBL2328 NextBio:603187 ArrayExpress:P22771
Genevestigator:P22771 GermOnline:ENSRNOG00000003313 Uniprot:P22771
Length = 452
Score = 403 (146.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 78/160 (48%), Positives = 106/160 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 153 (58.9 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 33/109 (30%), Positives = 51/109 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y +IF Q W D RL E
Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L + L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 118 DL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
Score = 65 (27.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YWI +
Sbjct: 418 IDTISRAAFPLAFLIFNIFYWITY 441
Score = 50 (22.7 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 327 FVFAALLEYAAVNFV 341
>UNIPROTKB|P22771 [details] [associations]
symbol:Glra2 "Glycine receptor subunit alpha-2"
species:10116 "Rattus norvegicus" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008129 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236 RGD:2705
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007416 GO:GO:0016934
GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0022824 CTD:2742 KO:K05194 OrthoDB:EOG4WWRJJ EMBL:X57281
EMBL:X61159 EMBL:AJ310837 IPI:IPI00210383 IPI:IPI00231543
PIR:S14816 PIR:S18836 RefSeq:NP_036700.1 RefSeq:XP_003752087.1
UniGene:Rn.10379 ProteinModelPortal:P22771 SMR:P22771 STRING:P22771
Ensembl:ENSRNOT00000004443 GeneID:100910572 GeneID:24397
KEGG:rno:100910572 KEGG:rno:24397 UCSC:RGD:2705 InParanoid:P22771
BindingDB:P22771 ChEMBL:CHEMBL2328 NextBio:603187
ArrayExpress:P22771 Genevestigator:P22771
GermOnline:ENSRNOG00000003313 Uniprot:P22771
Length = 452
Score = 403 (146.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 78/160 (48%), Positives = 106/160 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFEYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 153 (58.9 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 33/109 (30%), Positives = 51/109 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y +IF Q W D RL E
Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L + L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 118 DL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
Score = 65 (27.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YWI +
Sbjct: 418 IDTISRAAFPLAFLIFNIFYWITY 441
Score = 50 (22.7 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 327 FVFAALLEYAAVNFV 341
>UNIPROTKB|F1SQV0 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0016594 GO:GO:0022824
OMA:TTLFAFF EMBL:CU207369 EMBL:CU914724 Ensembl:ENSSSCT00000013268
Uniprot:F1SQV0
Length = 385
Score = 403 (146.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 78/160 (48%), Positives = 106/160 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 98 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 157
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 158 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 217
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 218 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 257
Score = 137 (53.3 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 30/97 (30%), Positives = 46/97 (47%)
Query: 196 PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMW 255
P V ++ + SI E +M Y +IF Q W D RL E L + L ++W
Sbjct: 3 PVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIW 61
Query: 256 RPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+PD FF N K F +T N + + K+ +LY ++
Sbjct: 62 KPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 98
Score = 65 (27.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YWI +
Sbjct: 351 IDTISRAAFPLAFLIFNIFYWITY 374
Score = 50 (22.7 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 260 FVFAALLEYAAVNFV 274
>UNIPROTKB|K7GSI6 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
EMBL:CU207369 EMBL:CU914724 Ensembl:ENSSSCT00000033189
Uniprot:K7GSI6
Length = 385
Score = 403 (146.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 78/160 (48%), Positives = 106/160 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 98 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 157
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 158 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 217
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 218 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 257
Score = 137 (53.3 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 29/97 (29%), Positives = 46/97 (47%)
Query: 196 PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMW 255
P V ++ + S+ E +M Y +IF Q W D RL E L + L ++W
Sbjct: 3 PVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDL-DPSMLDSIW 61
Query: 256 RPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+PD FF N K F +T N + + K+ +LY ++
Sbjct: 62 KPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 98
Score = 65 (27.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YWI +
Sbjct: 351 IDTISRAAFPLAFLIFNIFYWITY 374
Score = 50 (22.7 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 260 FVFAALLEYAAVNFV 274
>ZFIN|ZDB-GENE-010410-3 [details] [associations]
symbol:glra4a "glycine receptor, alpha 4a"
species:7955 "Danio rerio" [GO:0016594 "glycine binding"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA;IDA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0043200 "response to amino acid stimulus" evidence=IDA]
[GO:0007417 "central nervous system development" evidence=IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 ZFIN:ZDB-GENE-010410-3 GO:GO:0045664
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007417 GO:GO:0016934 GO:GO:0043200
HOVERGEN:HBG051707 eggNOG:NOG265706 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ EMBL:BC090676
EMBL:GQ406229 IPI:IPI00496864 UniGene:Dr.82595 SMR:Q5CZW5
Uniprot:Q5CZW5
Length = 457
Score = 399 (145.5 bits), Expect = 2.3e-46, Sum P(3) = 2.3e-46
Identities = 77/160 (48%), Positives = 106/160 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V + + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLSDNPVQVADDLTLPQFVLK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 155 (59.6 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y ++F Q W D RL E +
Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQQWNDPRLAYSEYPDASL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L + L ++W+PD FF N K F +T N + ++++ +LY ++ +
Sbjct: 118 DL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFQNGNVLYSIRLTLI 169
Score = 65 (27.9 bits), Expect = 2.3e-46, Sum P(3) = 2.3e-46
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YWI +
Sbjct: 422 IDTISRAVFPLSFLIFNVFYWITY 445
Score = 50 (22.7 bits), Expect = 2.3e-46, Sum P(3) = 2.3e-46
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 327 FVFAALLEYAAVNFV 341
>UNIPROTKB|F1NEM1 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453 GO:GO:0016594
GO:GO:0022824 OMA:FYFASLC EMBL:AADN02013212 IPI:IPI00580780
Ensembl:ENSGALT00000007899 Uniprot:F1NEM1
Length = 453
Score = 391 (142.7 bits), Expect = 2.0e-45, Sum P(3) = 2.0e-45
Identities = 78/161 (48%), Positives = 105/161 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + + + V E + LPQ L
Sbjct: 162 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLIFEWLEEQEAVQVAEGLTLPQFIL 221
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 222 RDEKDLGYCTKYYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 281
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR Q A S+ASLP VSY+KA+D +M+ C
Sbjct: 282 PARVGLGITTVLTMTTQSAGSRASLPKVSYVKAIDIWMAVC 322
Score = 157 (60.3 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 32/113 (28%), Positives = 53/113 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y ++F Q W D RL E
Sbjct: 55 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDSL 114
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L + L ++W+PD FF N K F +T N + ++K+ +LY ++ +
Sbjct: 115 DL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 166
Score = 64 (27.6 bits), Expect = 2.0e-45, Sum P(3) = 2.0e-45
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP F + N YW+++
Sbjct: 418 IDTISRAVFPFTFLVFNIFYWVVY 441
Score = 50 (22.7 bits), Expect = 2.0e-45, Sum P(3) = 2.0e-45
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 325 FVFAALLEYAAVNFV 339
>ZFIN|ZDB-GENE-991117-1 [details] [associations]
symbol:glra1 "glycine receptor, alpha 1" species:7955
"Danio rerio" [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA;IDA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0045664 "regulation of neuron differentiation" evidence=IMP]
[GO:0007417 "central nervous system development" evidence=IMP]
[GO:0043200 "response to amino acid stimulus" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0005254 "chloride
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
ZFIN:ZDB-GENE-991117-1 GO:GO:0045664 GO:GO:0005887 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007417 GO:GO:0016934
GO:GO:0043200 HOVERGEN:HBG051707 HSSP:P23415 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 EMBL:AF488379
IPI:IPI00486644 UniGene:Dr.75842 ProteinModelPortal:Q8QG93
SMR:Q8QG93 PRIDE:Q8QG93 InParanoid:Q8QG93 ArrayExpress:Q8QG93
Bgee:Q8QG93 Uniprot:Q8QG93
Length = 459
Score = 386 (140.9 bits), Expect = 2.0e-45, Sum P(3) = 2.0e-45
Identities = 74/160 (46%), Positives = 104/160 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+WD + + V + + LPQ L
Sbjct: 170 RITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQVADGLTLPQFILK 229
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 230 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 289
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 290 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 329
Score = 153 (58.9 bits), Expect = 2.2e-12, Sum P(3) = 2.2e-12
Identities = 42/154 (27%), Positives = 67/154 (43%)
Query: 143 KSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFH 202
K+ + +PP +L D M + + N DP+ K K+G P V +
Sbjct: 27 KAASPMPPSEFL---DKLMGKVSGYDARIRPN-FKVVDPQ-GSKSDGTHKKGPPVNVTCN 81
Query: 203 VTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFK 262
+ + SI E +M Y +IF Q W D RL E L + L ++W+PD FF
Sbjct: 82 IFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFA 140
Query: 263 NAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
N K F +T N + + K+ +LY ++ +
Sbjct: 141 NEKGANFHEVTTDNKLLRISKNGNVLYSIRITLV 174
Score = 70 (29.7 bits), Expect = 2.0e-45, Sum P(3) = 2.0e-45
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SRV FP++F I N YWI +
Sbjct: 425 IDTVSRVAFPLVFLIFNIFYWITY 448
Score = 49 (22.3 bits), Expect = 2.0e-45, Sum P(3) = 2.0e-45
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN +
Sbjct: 332 FVFSALLEYAAVNFI 346
>UNIPROTKB|E2RCM7 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 CTD:441509 KO:K05271 OMA:IQESRFY
EMBL:AAEX03026730 RefSeq:XP_549155.2 ProteinModelPortal:E2RCM7
Ensembl:ENSCAFT00000028247 GeneID:492035 KEGG:cfa:492035
NextBio:20864703 Uniprot:E2RCM7
Length = 457
Score = 389 (142.0 bits), Expect = 2.5e-45, Sum P(3) = 2.5e-45
Identities = 77/161 (47%), Positives = 105/161 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVSLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 158 (60.7 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 32/113 (28%), Positives = 53/113 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y ++F Q W D RL E
Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYQEYPDDSL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L + L ++W+PD FF N K F +T N + ++K+ +LY ++ +
Sbjct: 118 DL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 169
Score = 65 (27.9 bits), Expect = 2.5e-45, Sum P(3) = 2.5e-45
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP F I N YW+++
Sbjct: 422 IDTISRAVFPFTFLIFNTFYWVVY 445
Score = 50 (22.7 bits), Expect = 2.5e-45, Sum P(3) = 2.5e-45
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 328 FVFSALLEYAAVNFV 342
>UNIPROTKB|F1RYC5 [details] [associations]
symbol:LOC100525376 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 KO:K05271 EMBL:FP015842 EMBL:FP326726
RefSeq:XP_003135319.1 UniGene:Ssc.93565 Ensembl:ENSSSCT00000013704
GeneID:100525376 KEGG:ssc:100525376 OMA:FYFASLC Uniprot:F1RYC5
Length = 457
Score = 388 (141.6 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 77/161 (47%), Positives = 105/161 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 157 (60.3 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 32/113 (28%), Positives = 53/113 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y ++F Q W D RL E
Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDSL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L + L ++W+PD FF N K F +T N + ++K+ +LY ++ +
Sbjct: 118 DL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 169
Score = 65 (27.9 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP F I N YW+++
Sbjct: 422 IDTISRAVFPFTFLIFNIFYWVVY 445
Score = 50 (22.7 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 328 FVFAALLEYAAVNFV 342
>RGD|2704 [details] [associations]
symbol:Glra1 "glycine receptor, alpha 1" species:10116 "Rattus
norvegicus" [GO:0001508 "regulation of action potential"
evidence=IEA;ISO] [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IEA;ISO] [GO:0005622
"intracellular" evidence=ISO] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=ISO;ISS] [GO:0006811 "ion transport" evidence=ISO;ISS]
[GO:0006820 "anion transport" evidence=IDA] [GO:0006821 "chloride
transport" evidence=ISO;ISS;IDA] [GO:0006936 "muscle contraction"
evidence=ISO;ISS] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISO;ISS] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0007340 "acrosome reaction" evidence=IEA;ISO] [GO:0007601 "visual
perception" evidence=IEA;ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0009897 "external side of plasma membrane"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO;IDA]
[GO:0016594 "glycine binding" evidence=ISO;ISS;IDA] [GO:0016933
"extracellular-glycine-gated ion channel activity" evidence=IDA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=ISO;ISS;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030977 "taurine binding" evidence=ISO;ISS] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO;ISS] [GO:0043576 "regulation of respiratory gaseous
exchange" evidence=ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0050884 "neuromuscular process controlling
posture" evidence=IEA;ISO] [GO:0050905 "neuromuscular process"
evidence=ISO] [GO:0051260 "protein homooligomerization" evidence=IDA]
[GO:0051291 "protein heterooligomerization" evidence=IDA] [GO:0051970
"negative regulation of transmission of nerve impulse"
evidence=ISO;ISS] [GO:0060012 "synaptic transmission, glycinergic"
evidence=ISO;IDA] [GO:0060013 "righting reflex" evidence=IEA;ISO]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA;ISO] [GO:2000344 "positive regulation of
acrosome reaction" evidence=IEA;ISO] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673
PRINTS:PR01674 PROSITE:PS00236 RGD:2704 GO:GO:0005783 GO:GO:0051291
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0051260 GO:GO:0006936
GO:GO:0016934 GO:GO:0034707 GO:GO:0001964 HOVERGEN:HBG051707
eggNOG:NOG265706 CTD:2741 HOGENOM:HOG000231336 KO:K05193
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0030977 GO:GO:0022824
GO:GO:0051970 GO:GO:0060012 EMBL:D00833 EMBL:X55246 EMBL:M63915
EMBL:AJ310835 EMBL:Y00276 IPI:IPI00206855 IPI:IPI00324218 PIR:JN0014
PIR:S20662 RefSeq:NP_037265.1 UniGene:Rn.10109
ProteinModelPortal:P07727 SMR:P07727 DIP:DIP-48879N STRING:P07727
Ensembl:ENSRNOT00000063889 GeneID:25674 KEGG:rno:25674 UCSC:RGD:2704
InParanoid:P07727 BindingDB:P07727 ChEMBL:CHEMBL3246 NextBio:607619
ArrayExpress:P07727 Genevestigator:P07727
GermOnline:ENSRNOG00000013588 Uniprot:P07727
Length = 457
Score = 381 (139.2 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 72/160 (45%), Positives = 103/160 (64%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 155 (59.6 bits), Expect = 6.1e-13, Sum P(3) = 6.1e-13
Identities = 43/138 (31%), Positives = 61/138 (44%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K DA SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEADAARSAPKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E L + L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
Score = 72 (30.4 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+ SR+ FP+ F I N YWI++
Sbjct: 423 IDKISRIGFPMAFLIFNMFYWIIY 446
Score = 50 (22.7 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 321 FVFSALLEYAAVNFV 335
>UNIPROTKB|E9PT06 [details] [associations]
symbol:Glra1 "Glycine receptor subunit alpha-1"
species:10116 "Rattus norvegicus" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 RGD:2704
GO:GO:0043231 GO:GO:0005887 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0007628
GO:GO:2000344 GO:GO:0001964 GO:GO:0050884 GO:GO:0016594
GO:GO:0030977 GO:GO:0022824 GO:GO:0051970 GO:GO:0060012
IPI:IPI01007606 Ensembl:ENSRNOT00000066564 ArrayExpress:E9PT06
Uniprot:E9PT06
Length = 456
Score = 381 (139.2 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 72/160 (45%), Positives = 103/160 (64%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 155 (59.6 bits), Expect = 6.0e-13, Sum P(3) = 6.0e-13
Identities = 43/138 (31%), Positives = 61/138 (44%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K DA SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEADAARSAPKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E L + L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
Score = 72 (30.4 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+ SR+ FP+ F I N YWI++
Sbjct: 424 IDKISRIGFPMAFLIFNMFYWIIY 447
Score = 50 (22.7 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 321 FVFSALLEYAAVNFV 335
>UNIPROTKB|P57695 [details] [associations]
symbol:GLRA1 "Glycine receptor subunit alpha-1"
species:9913 "Bos taurus" [GO:0016594 "glycine binding"
evidence=ISS] [GO:0006936 "muscle contraction" evidence=ISS]
[GO:0006821 "chloride transport" evidence=ISS] [GO:0001964 "startle
response" evidence=ISS] [GO:0051970 "negative regulation of
transmission of nerve impulse" evidence=ISS] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISS]
[GO:0030977 "taurine binding" evidence=ISS] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISS] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISS] [GO:0006811 "ion transport" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:2000344 "positive
regulation of acrosome reaction" evidence=IEA] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=IEA] [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007340 "acrosome
reaction" evidence=IEA] [GO:0002087 "regulation of respiratory
gaseous exchange by neurological system process" evidence=IEA]
[GO:0001508 "regulation of action potential" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0034707
GO:GO:0007628 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
HOVERGEN:HBG051707 eggNOG:NOG265706 EMBL:AF268375 EMBL:AF268366
EMBL:AF268358 EMBL:AF268360 EMBL:AF268361 EMBL:AF268359
EMBL:AF268362 EMBL:AF268364 EMBL:AF268365 EMBL:AF268363
IPI:IPI00700898 IPI:IPI00807328 RefSeq:NP_776746.1 UniGene:Bt.5559
ProteinModelPortal:P57695 SMR:P57695 PRIDE:P57695
Ensembl:ENSBTAT00000019143 GeneID:281783 KEGG:bta:281783 CTD:2741
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 InParanoid:P57695
KO:K05193 OMA:NTANPVP OrthoDB:EOG4TF0KF NextBio:20805696
GO:GO:0016594 GO:GO:0030977 GO:GO:0022824 GO:GO:0051970
GO:GO:0060012 Uniprot:P57695
Length = 457
Score = 381 (139.2 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 72/160 (45%), Positives = 103/160 (64%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 153 (58.9 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 42/138 (30%), Positives = 61/138 (44%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +A SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEAEAARSASKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E L + L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
Score = 72 (30.4 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+ SR+ FP+ F I N YWI++
Sbjct: 423 IDKISRIGFPMAFLIFNMFYWIIY 446
Score = 50 (22.7 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 321 FVFSALLEYAAVNFV 335
>UNIPROTKB|F1RQB7 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000344 "positive regulation of acrosome reaction"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:0060013 "righting reflex"
evidence=IEA] [GO:0060012 "synaptic transmission, glycinergic"
evidence=IEA] [GO:0051970 "negative regulation of transmission of
nerve impulse" evidence=IEA] [GO:0050884 "neuromuscular process
controlling posture" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0030977 "taurine binding"
evidence=IEA] [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007340 "acrosome
reaction" evidence=IEA] [GO:0007218 "neuropeptide signaling
pathway" evidence=IEA] [GO:0006936 "muscle contraction"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0001964
"startle response" evidence=IEA] [GO:0001508 "regulation of action
potential" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008128
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
GO:GO:0043231 GO:GO:0005887 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0001508 GO:GO:0006936
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0007628
GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
GeneTree:ENSGT00550000074453 OMA:NTANPVP GO:GO:0016594
GO:GO:0030977 GO:GO:0022824 GO:GO:0051970 GO:GO:0060012
EMBL:CU570659 EMBL:CU463090 Ensembl:ENSSSCT00000018594
Uniprot:F1RQB7
Length = 443
Score = 381 (139.2 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 72/160 (45%), Positives = 103/160 (64%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 146 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 205
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 206 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 265
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 266 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 305
Score = 153 (58.9 bits), Expect = 9.0e-13, Sum P(3) = 9.0e-13
Identities = 42/138 (30%), Positives = 61/138 (44%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +A SA S S F D L YD P +G P V ++ + SI E
Sbjct: 11 KEAEAARSASKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 69
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E L + L ++W+PD FF N K F +T
Sbjct: 70 TMDYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITT 128
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 129 DNKLLRISRNGNVLYSIR 146
Score = 72 (30.4 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+ SR+ FP+ F I N YWI++
Sbjct: 409 IDKISRIGFPMAFLIFNMFYWIIY 432
Score = 50 (22.7 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 308 FVFSALLEYAAVNFV 322
>UNIPROTKB|F1PC16 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008128
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 CTD:2741
GeneTree:ENSGT00550000074453 KO:K05193 OMA:NTANPVP GO:GO:0016594
GO:GO:0022824 EMBL:AAEX03003083 RefSeq:XP_003434572.1
Ensembl:ENSCAFT00000028284 GeneID:489172 KEGG:cfa:489172
Uniprot:F1PC16
Length = 457
Score = 381 (139.2 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 72/160 (45%), Positives = 103/160 (64%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 151 (58.2 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 42/138 (30%), Positives = 61/138 (44%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +A SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEAEAARSAPKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E L + L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
Score = 72 (30.4 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+ SR+ FP+ F I N YWI++
Sbjct: 423 IDKISRIGFPMAFLIFNMFYWIIY 446
Score = 50 (22.7 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 321 FVFSALLEYAAVNFV 335
>UNIPROTKB|P23415 [details] [associations]
symbol:GLRA1 "Glycine receptor subunit alpha-1"
species:9606 "Homo sapiens" [GO:0022824 "transmitter-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0001508 "regulation of action potential" evidence=IEA]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0050884
"neuromuscular process controlling posture" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051291
"protein heterooligomerization" evidence=IEA] [GO:0060012 "synaptic
transmission, glycinergic" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IGI;IMP;IDA] [GO:0005887 "integral to plasma membrane"
evidence=IMP;IDA;NAS] [GO:0006811 "ion transport" evidence=IDA]
[GO:0007218 "neuropeptide signaling pathway" evidence=IDA]
[GO:0030977 "taurine binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0001964 "startle response" evidence=IMP]
[GO:0006821 "chloride transport" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0006936 "muscle contraction" evidence=IMP] [GO:0016021
"integral to membrane" evidence=NAS] [GO:0051970 "negative
regulation of transmission of nerve impulse" evidence=IMP]
[GO:0016594 "glycine binding" evidence=IDA] [GO:2000344 "positive
regulation of acrosome reaction" evidence=IMP] [GO:0042391
"regulation of membrane potential" evidence=IMP] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_15518 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 EMBL:CH471062 GO:GO:0009897 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0002087 GO:GO:0060080 GO:GO:0042391 GO:GO:0001508
GO:GO:0006936 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
DrugBank:DB00145 DrugBank:DB01159 GO:GO:0034707 GO:GO:0007628
DrugBank:DB01189 DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028
DrugBank:DB01236 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
DrugBank:DB00898 HOVERGEN:HBG051707 eggNOG:NOG265706 Orphanet:3197
CTD:2741 HOGENOM:HOG000231336 KO:K05193 OMA:NTANPVP
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0030977 GO:GO:0022824
GO:GO:0051970 GO:GO:0060012 EMBL:X52009 EMBL:AK312702 EMBL:BC074980
EMBL:BC114947 IPI:IPI00011565 IPI:IPI00795343 PIR:S12382
RefSeq:NP_000162.2 RefSeq:NP_001139512.1 UniGene:Hs.121490 PDB:1MOT
PDB:1VRY PDBsum:1MOT PDBsum:1VRY ProteinModelPortal:P23415
SMR:P23415 DIP:DIP-48768N STRING:P23415 TCDB:1.A.9.3.1
PhosphoSite:P23415 DMDM:116242495 PRIDE:P23415
Ensembl:ENST00000274576 Ensembl:ENST00000455880 GeneID:2741
KEGG:hsa:2741 UCSC:uc003lur.3 UCSC:uc003lut.3 GeneCards:GC05M151182
HGNC:HGNC:4326 HPA:HPA016502 MIM:138491 MIM:149400
neXtProt:NX_P23415 PharmGKB:PA28727 InParanoid:P23415
BindingDB:P23415 ChEMBL:CHEMBL5845 EvolutionaryTrace:P23415
GenomeRNAi:2741 NextBio:10804 ArrayExpress:P23415 Bgee:P23415
CleanEx:HS_GLRA1 Genevestigator:P23415 GermOnline:ENSG00000145888
Uniprot:P23415
Length = 457
Score = 381 (139.2 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 72/160 (45%), Positives = 103/160 (64%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 151 (58.2 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 42/138 (30%), Positives = 61/138 (44%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +A SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEAEAARSAPKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E L + L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
Score = 72 (30.4 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+ SR+ FP+ F I N YWI++
Sbjct: 423 IDKISRIGFPMAFLIFNMFYWIIY 446
Score = 50 (22.7 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 321 FVFSALLEYAAVNFV 335
>MGI|MGI:95747 [details] [associations]
symbol:Glra1 "glycine receptor, alpha 1 subunit" species:10090
"Mus musculus" [GO:0001508 "regulation of action potential"
evidence=IMP] [GO:0001964 "startle response" evidence=ISO;IMP]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IMP] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=ISO] [GO:0006820
"anion transport" evidence=ISO] [GO:0006821 "chloride transport"
evidence=ISO;IMP;IDA] [GO:0006936 "muscle contraction"
evidence=ISO] [GO:0007218 "neuropeptide signaling pathway"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=IMP]
[GO:0007340 "acrosome reaction" evidence=IMP] [GO:0007601 "visual
perception" evidence=IMP] [GO:0007628 "adult walking behavior"
evidence=IMP] [GO:0009897 "external side of plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016594 "glycine binding"
evidence=ISO;IDA;IMP] [GO:0016933 "extracellular-glycine-gated ion
channel activity" evidence=ISO] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISO;IMP;IDA] [GO:0022824 "transmitter-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030977 "taurine binding" evidence=ISO] [GO:0034220 "ion
transmembrane transport" evidence=ISO;IMP;IDA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042391 "regulation of
membrane potential" evidence=ISO;IMP;IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043576 "regulation of respiratory gaseous exchange"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0050884 "neuromuscular
process controlling posture" evidence=IMP] [GO:0050905
"neuromuscular process" evidence=IMP] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051291 "protein
heterooligomerization" evidence=ISO] [GO:0051970 "negative
regulation of transmission of nerve impulse" evidence=ISO]
[GO:0060012 "synaptic transmission, glycinergic" evidence=ISO;IMP]
[GO:0060013 "righting reflex" evidence=IMP] [GO:0060080 "regulation
of inhibitory postsynaptic membrane potential" evidence=IMP]
[GO:2000344 "positive regulation of acrosome reaction"
evidence=ISO] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR008128 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01674
PROSITE:PS00236 MGI:MGI:95747 GO:GO:0043231 GO:GO:0005887
GO:GO:0009897 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601 GO:GO:0002087
GO:GO:0060080 GO:GO:0001508 GO:GO:0006936 GO:GO:0016934
GO:GO:0007340 GO:GO:0060013 GO:GO:0034707 GO:GO:0007628
EMBL:AL596207 GO:GO:2000344 GO:GO:0001964 GO:GO:0050884
HOVERGEN:HBG051707 eggNOG:NOG265706 GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 OMA:NTANPVP GO:GO:0016594 GO:GO:0030977
GO:GO:0022824 GO:GO:0051970 GO:GO:0060012 EMBL:S73717 EMBL:S73718
EMBL:X75832 EMBL:X75833 EMBL:X75834 EMBL:X75835 EMBL:X75836
EMBL:X75837 EMBL:X75838 EMBL:X75839 EMBL:X75840 IPI:IPI00405549
IPI:IPI00466207 PIR:C49970 UniGene:Mm.89320
ProteinModelPortal:Q64018 SMR:Q64018 STRING:Q64018
PhosphoSite:Q64018 PRIDE:Q64018 Ensembl:ENSMUST00000075603
Ensembl:ENSMUST00000102716 InParanoid:Q5NCT8 Bgee:Q64018
CleanEx:MM_GLRA1 Genevestigator:Q64018
GermOnline:ENSMUSG00000000263 Uniprot:Q64018
Length = 457
Score = 381 (139.2 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 72/160 (45%), Positives = 103/160 (64%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 159 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 218
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 219 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 278
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 318
Score = 151 (58.2 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 42/138 (30%), Positives = 61/138 (44%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K +A SA S S F D L YD P +G P V ++ + SI E
Sbjct: 24 KEAEAARSAPKPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAET 82
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E L + L ++W+PD FF N K F +T
Sbjct: 83 TMDYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITT 141
Query: 275 PNHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 142 DNKLLRISRNGNVLYSIR 159
Score = 72 (30.4 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+ SR+ FP+ F I N YWI++
Sbjct: 423 IDKISRIGFPMAFLIFNMFYWIIY 446
Score = 50 (22.7 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 321 FVFSALLEYAAVNFV 335
>UNIPROTKB|Q14C71 [details] [associations]
symbol:GLRA1 "GLRA1 protein" species:9606 "Homo sapiens"
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 HOGENOM:HOG000231336
OrthoDB:EOG4TF0KF GO:GO:0016594 GO:GO:0022824 UniGene:Hs.121490
HGNC:HGNC:4326 EMBL:AC091982 EMBL:AC010312 EMBL:BC114967
IPI:IPI01014809 SMR:Q14C71 STRING:Q14C71 Ensembl:ENST00000545569
UCSC:uc003lus.3 Uniprot:Q14C71
Length = 366
Score = 381 (139.2 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 72/160 (45%), Positives = 103/160 (64%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 76 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILK 135
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 136 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 195
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 196 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 235
Score = 113 (44.8 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M Y +IF Q W D RL E L + L ++W+PD FF N K F +T
Sbjct: 1 MDYRVNIFLRQQWNDPRLAYNEYPDDSLDL-DPSMLDSIWKPDLFFANEKGAHFHEITTD 59
Query: 276 NHYVWLYKDKTILYMVK 292
N + + ++ +LY ++
Sbjct: 60 NKLLRISRNGNVLYSIR 76
Score = 72 (30.4 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+ SR+ FP+ F I N YWI++
Sbjct: 332 IDKISRIGFPMAFLIFNMFYWIIY 355
Score = 50 (22.7 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 238 FVFSALLEYAAVNFV 252
>UNIPROTKB|E1BHI1 [details] [associations]
symbol:GLRA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OMA:IQESRFY EMBL:DAAA02071337
EMBL:DAAA02071338 IPI:IPI00708020 Ensembl:ENSBTAT00000022870
Uniprot:E1BHI1
Length = 457
Score = 386 (140.9 bits), Expect = 5.1e-45, Sum P(3) = 5.1e-45
Identities = 77/161 (47%), Positives = 105/161 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 157 (60.3 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 32/113 (28%), Positives = 53/113 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y ++F Q W D RL E
Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDSL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L + L ++W+PD FF N K F +T N + ++K+ +LY ++ +
Sbjct: 118 DL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 169
Score = 65 (27.9 bits), Expect = 5.1e-45, Sum P(3) = 5.1e-45
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP F I N YW+++
Sbjct: 422 IDTISRAVFPFTFLIFNIFYWVVY 445
Score = 50 (22.7 bits), Expect = 5.1e-45, Sum P(3) = 5.1e-45
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 328 FVFAALLEYAAVNFV 342
>MGI|MGI:95750 [details] [associations]
symbol:Glra4 "glycine receptor, alpha 4 subunit" species:10090
"Mus musculus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PROSITE:PS00236 MGI:MGI:95750 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707
eggNOG:NOG265706 GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ CTD:441509 KO:K05271
EMBL:DQ109809 EMBL:AL671887 EMBL:X75850 EMBL:X75851 EMBL:X75852
EMBL:X75853 EMBL:AF462147 IPI:IPI00474759 PIR:A49970
RefSeq:NP_034427.2 UniGene:Mm.215168 ProteinModelPortal:Q61603
SMR:Q61603 PhosphoSite:Q61603 PRIDE:Q61603
Ensembl:ENSMUST00000018739 GeneID:14657 KEGG:mmu:14657
UCSC:uc007izn.1 InParanoid:A2AEA9 BindingDB:Q61603
ChEMBL:CHEMBL3500 NextBio:286518 Bgee:Q61603 CleanEx:MM_GLRA4
Genevestigator:Q61603 GermOnline:ENSMUSG00000018595 Uniprot:Q61603
Length = 456
Score = 386 (140.9 bits), Expect = 6.5e-45, Sum P(3) = 6.5e-45
Identities = 77/161 (47%), Positives = 105/161 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 164 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFIL 223
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 224 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 283
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 157 (60.3 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 32/113 (28%), Positives = 53/113 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y ++F Q W D RL E
Sbjct: 57 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDSL 116
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L + L ++W+PD FF N K F +T N + ++K+ +LY ++ +
Sbjct: 117 DL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 168
Score = 64 (27.6 bits), Expect = 6.5e-45, Sum P(3) = 6.5e-45
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP F + N YW+++
Sbjct: 421 IDTISRAVFPFTFLVFNIFYWVVY 444
Score = 50 (22.7 bits), Expect = 6.5e-45, Sum P(3) = 6.5e-45
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 327 FVFAALLEYAAVNFV 341
>RGD|1564103 [details] [associations]
symbol:Glra4 "glycine receptor, alpha 4" species:10116 "Rattus
norvegicus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008127
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236 RGD:1564103
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ CTD:441509 KO:K05271
OMA:IQESRFY IPI:IPI00361637 RefSeq:NP_001178843.1 UniGene:Rn.228202
ProteinModelPortal:D4A4R5 Ensembl:ENSRNOT00000052302 GeneID:367912
KEGG:rno:367912 UCSC:RGD:1564103 NextBio:691840 ArrayExpress:D4A4R5
Uniprot:D4A4R5
Length = 456
Score = 386 (140.9 bits), Expect = 6.5e-45, Sum P(3) = 6.5e-45
Identities = 77/161 (47%), Positives = 105/161 (65%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T +DL+F+W + P + V E + LPQ L
Sbjct: 164 RLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFIL 223
Query: 65 VKNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 224 RDEKDLGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 283
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 284 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 157 (60.3 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 32/113 (28%), Positives = 53/113 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y ++F Q W D RL E
Sbjct: 57 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDSL 116
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
L + L ++W+PD FF N K F +T N + ++K+ +LY ++ +
Sbjct: 117 DL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 168
Score = 64 (27.6 bits), Expect = 6.5e-45, Sum P(3) = 6.5e-45
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP F + N YW+++
Sbjct: 421 IDTISRAVFPFTFLVFNIFYWVVY 444
Score = 50 (22.7 bits), Expect = 6.5e-45, Sum P(3) = 6.5e-45
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 327 FVFAALLEYAAVNFV 341
>UNIPROTKB|O75311 [details] [associations]
symbol:GLRA3 "Glycine receptor subunit alpha-3"
species:9606 "Homo sapiens" [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0007268 "synaptic transmission" evidence=NAS]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008130
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236
EMBL:AF017724 GO:GO:0016021 GO:GO:0005886 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 EMBL:CH471056
DrugBank:DB00145 GO:GO:0034707 HOVERGEN:HBG051707 eggNOG:NOG265706
KO:K05195 HOGENOM:HOG000231336 OrthoDB:EOG4TF0KF GO:GO:0016594
GO:GO:0022824 TCDB:1.A.9.3.1 EMBL:AF017715 EMBL:AF017716
EMBL:AF017717 EMBL:AF017718 EMBL:AF017719 EMBL:AF017720
EMBL:AF017721 EMBL:AF017722 EMBL:AF017723 EMBL:U93917 EMBL:BC036086
IPI:IPI00025243 IPI:IPI00216193 RefSeq:NP_001036008.1
RefSeq:NP_006520.2 UniGene:Hs.413099 ProteinModelPortal:O75311
SMR:O75311 STRING:O75311 PhosphoSite:O75311 PRIDE:O75311 DNASU:8001
Ensembl:ENST00000274093 Ensembl:ENST00000340217 GeneID:8001
KEGG:hsa:8001 UCSC:uc003ity.1 UCSC:uc003itz.1 CTD:8001
GeneCards:GC04M175558 HGNC:HGNC:4328 HPA:HPA014805 MIM:600421
neXtProt:NX_O75311 PharmGKB:PA28729 InParanoid:O75311 OMA:PKNSDEM
PhylomeDB:O75311 BindingDB:O75311 ChEMBL:CHEMBL1075092
GenomeRNAi:8001 NextBio:30552 ArrayExpress:O75311 Bgee:O75311
CleanEx:HS_GLRA3 Genevestigator:O75311 GermOnline:ENSG00000145451
Uniprot:O75311
Length = 464
Score = 411 (149.7 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 91/223 (40%), Positives = 130/223 (58%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W E P+ V E + LPQ L
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQDEAPVQVAEGLTLPQFLLK 223
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 224 EEKDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 283
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACT--VSSTSLTF---NDILPE 179
AR Q + S+ASLP VSY+KA+D +M+ C V S L + N + +
Sbjct: 284 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQ 343
Query: 180 DPKL--YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAA 220
+L + + R K E ++ + M D + E+ ++ A
Sbjct: 344 HKELLRFRRKRKNKTEAFALEKFYRFSDMD-DEVRESRFSFTA 385
Score = 161 (61.7 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 42/138 (30%), Positives = 61/138 (44%)
Query: 155 KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
K D+ S S S F D L YD P +G P V ++ + SI E
Sbjct: 29 KETDSARSRSAPMSPS-DFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAET 87
Query: 215 SMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
+M Y +IF Q W D RL E L + L ++W+PD FF N K F +T
Sbjct: 88 TMDYRVNIFLRQKWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEKGANFHEVTT 146
Query: 275 PNHYVWLYKDKTILYMVK 292
N + ++K+ +LY ++
Sbjct: 147 DNKLLRIFKNGNVLYSIR 164
Score = 66 (28.3 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YW+++
Sbjct: 428 IDTISRACFPLAFLIFNIFYWVIY 451
Score = 50 (22.7 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 326 FVFSALLEYAAVNFV 340
>ZFIN|ZDB-GENE-010410-2 [details] [associations]
symbol:glrba "gylcine receptor, beta a" species:7955
"Danio rerio" [GO:0016934 "extracellular-glycine-gated chloride
channel activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236
ZFIN:ZDB-GENE-010410-2 GO:GO:0016021 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 HOVERGEN:HBG051707
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 OrthoDB:EOG4HMJ97
PANTHER:PTHR18945:SF29 EMBL:BX284619 EMBL:CU075714 EMBL:AJ404971
IPI:IPI00492685 RefSeq:NP_571856.1 UniGene:Dr.7438
Ensembl:ENSDART00000102790 GeneID:83412 KEGG:dre:83412 CTD:83412
eggNOG:KOG3644 InParanoid:Q9DES8 OMA:GGTPIHV NextBio:20934181
Uniprot:Q9DES8
Length = 498
Score = 365 (133.5 bits), Expect = 8.7e-42, Sum P(3) = 8.7e-42
Identities = 69/162 (42%), Positives = 102/162 (62%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC + ++P DTQ C +Q+ES +TT DL+F W P+ +DE I LPQ +
Sbjct: 175 RLSVTLSCPLALQLFPMDTQYCKMQLESFGYTTKDLVFMWQSGDPVQMDE-IALPQFDVK 233
Query: 66 KN--KTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ K A+C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 234 QEDIKYANCTKFYPGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 293
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ AR + + LP VSY+KA+D +M AC
Sbjct: 294 SAARVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWMIAC 335
Score = 165 (63.1 bits), Expect = 3.3e-12, Sum P(3) = 3.3e-12
Identities = 41/141 (29%), Positives = 67/141 (47%)
Query: 152 SYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSI 211
S L A D + +STS N +L YD P +G P ++ + SI
Sbjct: 41 SQLSAED--LDRVPANSTSNILNRLL----MTYDSRIRPNFKGIPVEDKVNIFINSFGSI 94
Query: 212 DENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQT 271
E +M Y +IF Q W D RLRLP + S+ ++ + +W+PD FF N K F
Sbjct: 95 QETTMDYRVNIFLRQRWNDPRLRLPTDFKSDALTVDPKMFQCLWKPDLFFANEKNANFHD 154
Query: 272 MTIPNHYVWLYKDKTILYMVK 292
+T N ++++++ +L ++
Sbjct: 155 VTQENILLFIFRNGDVLISMR 175
Score = 56 (24.8 bits), Expect = 8.7e-42, Sum P(3) = 8.7e-42
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D ++R FP F N YW ++
Sbjct: 474 VDLYARALFPFTFLFFNVIYWSVY 497
Score = 49 (22.3 bits), Expect = 8.7e-42, Sum P(3) = 8.7e-42
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 295 FMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENAR 335
F +L+EY +V ++L P+ + +KI ++A KE AR
Sbjct: 340 FASLVEYAVVQVMLNS------PKRIEAEKI-KMAEKEKAR 373
>ZFIN|ZDB-GENE-020402-1 [details] [associations]
symbol:glra3 "glycine receptor, alpha 3" species:7955
"Danio rerio" [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
ZFIN:ZDB-GENE-020402-1 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 HSSP:P23415
KO:K05195 GO:GO:0016594 GO:GO:0022824 CTD:8001 EMBL:AJ308516
IPI:IPI00500173 RefSeq:NP_694497.1 UniGene:Dr.12384
ProteinModelPortal:Q90W14 SMR:Q90W14 GeneID:192124 KEGG:dre:192124
NextBio:20797134 Uniprot:Q90W14
Length = 450
Score = 393 (143.4 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 84/197 (42%), Positives = 121/197 (61%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W + P+ V + + LPQ ++
Sbjct: 164 RLTLTLSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGPVQVADGLTLPQF-IL 222
Query: 66 KNKT--ADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K+++ C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 223 KDESDLRYCTKHYNTGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 282
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACT--VSSTSLTF---NDILP 178
PAR Q + S+ SLP VSY+KA+D +M+ C V S L + N +
Sbjct: 283 PARVALGITTVLTMTTQSSGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSR 342
Query: 179 EDPKLYDKMRPPKKEGQ 195
+ +L R KK G+
Sbjct: 343 QHKELLRFRRRRKKSGK 359
Score = 156 (60.0 bits), Expect = 2.8e-12, Sum P(3) = 2.8e-12
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E
Sbjct: 57 YDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSEYPDDSL 116
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L + L ++W+PD FF N K F +T N + ++K+ +LY ++
Sbjct: 117 DL-DPSMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIR 164
Score = 64 (27.6 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 19/79 (24%), Positives = 28/79 (35%)
Query: 310 DSDLPKPPEPAKQDKIFELAAKENARLLTGQPMIPPNHXXXXXXXXXXXXXXXINIDRFS 369
+S L P K + + A NA +P + P ID S
Sbjct: 365 ESRLSFTPNAGKDGAVPKTA--NNAATTPSEPAVAPGKSHEEMRKLFIDRAK--KIDTVS 420
Query: 370 RVFFPVLFAILNCTYWIMF 388
R FP+ F N YW+++
Sbjct: 421 RAGFPLAFLFFNIFYWVLY 439
Score = 50 (22.7 bits), Expect = 2.8e-12, Sum P(3) = 2.8e-12
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 326 FVFSALLEYAAVNFV 340
>FB|FBgn0024963 [details] [associations]
symbol:GluClalpha "GluClalpha" species:7227 "Drosophila
melanogaster" [GO:0008068 "extracellular-glutamate-gated chloride
channel activity" evidence=NAS;IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048812
"neuron projection morphogenesis" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 EMBL:AE014297 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
eggNOG:NOG265706 KO:K05273 EMBL:U58776 EMBL:AJ002232 EMBL:AF297500
EMBL:AF297501 EMBL:DQ665648 RefSeq:NP_001014641.1
RefSeq:NP_001034061.1 RefSeq:NP_650827.2 RefSeq:NP_732447.1
UniGene:Dm.20644 ProteinModelPortal:Q94900 SMR:Q94900
MINT:MINT-813042 STRING:Q94900 TCDB:1.A.9.4.1 PaxDb:Q94900
GeneID:42350 KEGG:dme:Dmel_CG7535 UCSC:CG7535-RA CTD:42350
FlyBase:FBgn0024963 InParanoid:Q94900 OrthoDB:EOG42BVQV
GenomeRNAi:42350 NextBio:828361 Bgee:Q94900 GermOnline:CG7535
GO:GO:0008068 InterPro:IPR015680 PANTHER:PTHR18945:SF26
Uniprot:Q94900
Length = 456
Score = 355 (130.0 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 68/159 (42%), Positives = 92/159 (57%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L L+C MN +YP D Q CSL+M S TT+DL+F W P+ V + + LP+ L
Sbjct: 156 RISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEGDPVQVVKNLHLPRFTLE 215
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K T C+ +TG ++CL+V + KR YYL YIP C++VI+SWVSFW+ A PA
Sbjct: 216 KFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPA 275
Query: 126 RXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
R Q + ASLPPVSY KA+D + C
Sbjct: 276 RVSLGVTTLLTMATQTSGINASLPPVSYTKAIDVWTGVC 314
Score = 153 (58.9 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 43/168 (25%), Positives = 81/168 (48%)
Query: 153 YLKAVDAFMSACTVS---STSLTFND----ILPE--DPKLYD-KMRPPKKEGQ--PTIVY 200
Y A+ F S C+ S + + F + +L + YD ++RP G P IV
Sbjct: 6 YFWAILYFASLCSASLANNAKINFREKEKKVLDQILGAGKYDARIRPSGINGTDGPAIVR 65
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSF 260
++ V + +I + M Y+ + F + W D RL+ +++ + L + +W PD F
Sbjct: 66 INLFVRSIMTISDIKMEYSVQLTFREQWTDERLKF-DDIQGRLKYLTLTEANRVWMPDLF 124
Query: 261 FKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
F N K F + +PN Y+ ++ + ++LY ++ ++L C +N+ L
Sbjct: 125 FSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR---ISLTLACPMNLKL 169
Score = 67 (28.6 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 365 IDRFSRVFFPVLFAILNCTYW 385
ID SR+ FP++FA+ N YW
Sbjct: 425 IDVISRITFPLVFALFNLVYW 445
Score = 45 (20.9 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 9/13 (69%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ LVN
Sbjct: 317 FVFGALLEFALVN 329
>UNIPROTKB|F1NH12 [details] [associations]
symbol:GLRA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0001508
"regulation of action potential" evidence=IEA] [GO:0001964 "startle
response" evidence=IEA] [GO:0002087 "regulation of respiratory
gaseous exchange by neurological system process" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA] [GO:0006936
"muscle contraction" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0009897
"external side of plasma membrane" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0030977 "taurine binding" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050884 "neuromuscular process controlling posture"
evidence=IEA] [GO:0051970 "negative regulation of transmission of
nerve impulse" evidence=IEA] [GO:0060012 "synaptic transmission,
glycinergic" evidence=IEA] [GO:0060013 "righting reflex"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:2000344 "positive regulation
of acrosome reaction" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008128 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01674 PROSITE:PS00236 GO:GO:0043231
GO:GO:0005887 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0001508
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0043576
GO:GO:2000344 GeneTree:ENSGT00550000074453 OMA:NTANPVP
GO:GO:0016594 GO:GO:0030977 GO:GO:0022824 GO:GO:0051970
EMBL:AADN02028653 IPI:IPI00580687 Ensembl:ENSGALT00000034504
Uniprot:F1NH12
Length = 452
Score = 381 (139.2 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 83/211 (39%), Positives = 123/211 (58%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C M+ +P D Q C +Q+ES +T +DLIF+W + + V + + LPQ L
Sbjct: 162 RITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVADGLTLPQFILK 221
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+E F L+R++GYYL YIP+ LIVI+SW+SFWI +AAP
Sbjct: 222 EEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAP 281
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACT--VSSTSLTF---NDILPE 179
AR Q + S+ASLP VSY+KA+D +M+ C V S L + N + +
Sbjct: 282 ARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQ 341
Query: 180 DPKL--YDKMRPPKKEGQPTIVYFHVTVMGL 208
+L + + R KE + F+ T G+
Sbjct: 342 HKELLRFRRKRRHHKEDEAGEGRFNFTAYGM 372
Score = 147 (56.8 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 33/109 (30%), Positives = 51/109 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI E +M Y +IF Q W D RL E
Sbjct: 55 YDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSL 114
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L + L ++W+PD FF N K F +T N + + ++ +LY ++
Sbjct: 115 DL-DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIR 162
Score = 73 (30.8 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 338 TGQPMIPPNHXXXXXXXXXXXXXXXINIDRFSRVFFPVLFAILNCTYWIMF 388
T P+ PP+ ID+ SR+ FP+ F I N YWI++
Sbjct: 393 TANPVPPPSRSPEEMRKLFIQRAK--KIDKISRIGFPMAFLIFNIFYWIIY 441
Score = 50 (22.7 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 324 FVFSALLEYAAVNFV 338
>UNIPROTKB|Q9GJS9 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9913
"Bos taurus" [GO:0001964 "startle response" evidence=ISS]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=ISS] [GO:0016933 "extracellular-glycine-gated ion channel
activity" evidence=ISS] [GO:0016594 "glycine binding" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0007268
"synaptic transmission" evidence=ISS] [GO:0007218 "neuropeptide
signaling pathway" evidence=ISS] [GO:0006811 "ion transport"
evidence=ISS] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 GO:GO:0005886 GO:GO:0007399 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218
GO:GO:0016934 GO:GO:0034707 GO:GO:0001964 HOVERGEN:HBG051707
GO:GO:0016933 HOGENOM:HOG000231336 EMBL:AF268376 EMBL:AF268374
EMBL:AF268367 EMBL:AF268370 EMBL:AF268369 EMBL:AF268371
EMBL:AF268368 EMBL:AF268372 EMBL:AF268373 EMBL:BC123491
IPI:IPI00694047 RefSeq:NP_776496.1 UniGene:Bt.5975
ProteinModelPortal:Q9GJS9 PRIDE:Q9GJS9 GeneID:281198
KEGG:bta:281198 CTD:2743 eggNOG:NOG295166 InParanoid:Q9GJS9
KO:K05196 OrthoDB:EOG4HMJ97 NextBio:20805254 PANTHER:PTHR18945:SF29
Uniprot:Q9GJS9
Length = 497
Score = 362 (132.5 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 69/162 (42%), Positives = 102/162 (62%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ AR + A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 170 (64.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 42/147 (28%), Positives = 73/147 (49%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENMT-SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKFVFMALMEYCLVNIVLGDSD 312
+L ++ +++ C +++ L D
Sbjct: 170 DVLVSMR---LSITLSCPLDLTLFPMD 193
Score = 57 (25.1 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID ++R FP F N YW ++
Sbjct: 473 IDLYARALFPFCFLFFNVIYWSIY 496
Score = 45 (20.9 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 284 DKTILYMVKFVFMALMEYCLVNIVLGDSDLPKPPEPAK 321
D ++ + F F +L+EY +V ++L + PK E K
Sbjct: 330 DVWLIACLLFGFASLVEYAVVQVMLNN---PKRVEAEK 364
>UNIPROTKB|E2QS67 [details] [associations]
symbol:GLRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008060
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021 GO:GO:0007399
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0007628 GO:GO:0001964 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0060012 CTD:2743 KO:K05196
PANTHER:PTHR18945:SF29 OMA:PTMFKCL EMBL:AAEX03010077
RefSeq:XP_532701.1 Ensembl:ENSCAFT00000013690 GeneID:475477
KEGG:cfa:475477 NextBio:20851316 Uniprot:E2QS67
Length = 497
Score = 362 (132.5 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 69/162 (42%), Positives = 102/162 (62%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ AR + A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 170 (64.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 42/147 (28%), Positives = 73/147 (49%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENMT-SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKFVFMALMEYCLVNIVLGDSD 312
+L ++ +++ C +++ L D
Sbjct: 170 DVLVSMR---LSITLSCPLDLTLFPMD 193
Score = 57 (25.1 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID ++R FP F N YW ++
Sbjct: 473 IDLYARALFPFCFLFFNVIYWSIY 496
Score = 45 (20.9 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 284 DKTILYMVKFVFMALMEYCLVNIVLGDSDLPKPPEPAK 321
D ++ + F F +L+EY +V ++L + PK E K
Sbjct: 330 DVWLIACLLFGFASLVEYAVVQVMLNN---PKRVEAEK 364
>UNIPROTKB|P48167 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9606
"Homo sapiens" [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007340
"acrosome reaction" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0007628 "adult walking behavior" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0051291 "protein heterooligomerization" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0060013 "righting reflex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IDA;TAS] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0006811 "ion transport" evidence=IDA] [GO:0007218
"neuropeptide signaling pathway" evidence=IDA] [GO:0016933
"extracellular-glycine-gated ion channel activity" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007399
"nervous system development" evidence=IMP] [GO:0001964 "startle
response" evidence=IMP] [GO:0016594 "glycine binding" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_15518 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 GO:GO:0051291 GO:GO:0007399 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601 GO:GO:0042391
GO:GO:0016934 GO:GO:0007340 EMBL:CH471056 GO:GO:0060013
DrugBank:DB00145 GO:GO:0034707 GO:GO:0007628 GO:GO:0001964
HOVERGEN:HBG051707 Orphanet:3197 HOGENOM:HOG000231336 GO:GO:0016594
GO:GO:0060012 TCDB:1.A.9.3.1 CTD:2743 eggNOG:NOG295166 KO:K05196
OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29 EMBL:U33267 EMBL:AF094754
EMBL:AF094755 EMBL:CD013911 EMBL:AK290617 EMBL:AC079403
EMBL:BC032635 IPI:IPI00008224 IPI:IPI00945266 PIR:G02031
RefSeq:NP_000815.1 RefSeq:NP_001159532.1 RefSeq:NP_001159533.1
UniGene:Hs.32973 ProteinModelPortal:P48167 SMR:P48167 STRING:P48167
PhosphoSite:P48167 DMDM:1346173 PRIDE:P48167 DNASU:2743
Ensembl:ENST00000264428 Ensembl:ENST00000509282
Ensembl:ENST00000541722 GeneID:2743 KEGG:hsa:2743 UCSC:uc003ipj.2
GeneCards:GC04P157997 HGNC:HGNC:4329 MIM:138492 MIM:614619
neXtProt:NX_P48167 PharmGKB:PA28730 InParanoid:P48167 OMA:PTMFKCL
PhylomeDB:P48167 GenomeRNAi:2743 NextBio:10812 ArrayExpress:P48167
Bgee:P48167 CleanEx:HS_GLRB Genevestigator:P48167
GermOnline:ENSG00000109738 Uniprot:P48167
Length = 497
Score = 362 (132.5 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 69/162 (42%), Positives = 102/162 (62%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ AR + A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 170 (64.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 42/147 (28%), Positives = 73/147 (49%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENMT-SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKFVFMALMEYCLVNIVLGDSD 312
+L ++ +++ C +++ L D
Sbjct: 170 DVLVSMR---LSITLSCPLDLTLFPMD 193
Score = 57 (25.1 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID ++R FP F N YW ++
Sbjct: 473 IDLYARALFPFCFLFFNVIYWSIY 496
Score = 45 (20.9 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 284 DKTILYMVKFVFMALMEYCLVNIVLGDSDLPKPPEPAK 321
D ++ + F F +L+EY +V ++L + PK E K
Sbjct: 330 DVWLIACLLFGFASLVEYAVVQVMLNN---PKRVEAEK 364
>MGI|MGI:95751 [details] [associations]
symbol:Glrb "glycine receptor, beta subunit" species:10090
"Mus musculus" [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0005488
"binding" evidence=IPI] [GO:0005783 "endoplasmic reticulum"
evidence=ISA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=ISO;ISS] [GO:0006821 "chloride transport" evidence=IMP]
[GO:0007218 "neuropeptide signaling pathway" evidence=ISO;ISS]
[GO:0007268 "synaptic transmission" evidence=ISO;ISS] [GO:0007340
"acrosome reaction" evidence=IMP] [GO:0007399 "nervous system
development" evidence=ISO;ISS] [GO:0007601 "visual perception"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0009897 "external side of plasma membrane" evidence=ISA]
[GO:0016020 "membrane" evidence=ISA;IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016594 "glycine binding"
evidence=ISO;ISS;IMP] [GO:0016933 "extracellular-glycine-gated ion
channel activity" evidence=ISO;ISS] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=ISS;IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034220 "ion transmembrane transport" evidence=IMP] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042391 "regulation of
membrane potential" evidence=IMP] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050905 "neuromuscular process" evidence=IMP] [GO:0051291
"protein heterooligomerization" evidence=ISO] [GO:0060012 "synaptic
transmission, glycinergic" evidence=ISO;IMP] [GO:0060013 "righting
reflex" evidence=IMP] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677
PROSITE:PS00236 MGI:MGI:95751 GO:GO:0005783 GO:GO:0051291
GO:GO:0007399 GO:GO:0009897 GO:GO:0030054 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0034707 GO:GO:0007628 GO:GO:0001964 EMBL:CH466547
HOVERGEN:HBG051707 GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0060012 CTD:2743
eggNOG:NOG295166 KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29
OMA:PTMFKCL EMBL:U09399 EMBL:X81202 EMBL:X81201 EMBL:L32594
EMBL:AK083251 EMBL:BC037605 IPI:IPI00108776 PIR:S46459
RefSeq:NP_034428.2 UniGene:Mm.275639 ProteinModelPortal:P48168
SMR:P48168 MINT:MINT-4787310 STRING:P48168 PhosphoSite:P48168
PRIDE:P48168 Ensembl:ENSMUST00000029654 GeneID:14658 KEGG:mmu:14658
InParanoid:Q5U5X3 NextBio:286522 Bgee:P48168 CleanEx:MM_GLRB
Genevestigator:P48168 GermOnline:ENSMUSG00000028020 Uniprot:P48168
Length = 496
Score = 362 (132.5 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 69/162 (42%), Positives = 102/162 (62%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ AR + A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 170 (64.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 42/147 (28%), Positives = 73/147 (49%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENMT-SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKFVFMALMEYCLVNIVLGDSD 312
+L ++ +++ C +++ L D
Sbjct: 170 DVLVSMR---LSITLSCPLDLTLFPMD 193
Score = 57 (25.1 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID ++R FP F N YW ++
Sbjct: 472 IDLYARALFPFCFLFFNVIYWSIY 495
Score = 45 (20.9 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 284 DKTILYMVKFVFMALMEYCLVNIVLGDSDLPKPPEPAK 321
D ++ + F F +L+EY +V ++L + PK E K
Sbjct: 330 DVWLIACLLFGFASLVEYAVVQVMLNN---PKRVEAEK 364
>RGD|2706 [details] [associations]
symbol:Glrb "glycine receptor, beta" species:10116 "Rattus
norvegicus" [GO:0001964 "startle response" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=ISO;ISS]
[GO:0006821 "chloride transport" evidence=ISO] [GO:0007218
"neuropeptide signaling pathway" evidence=ISO;ISS] [GO:0007268
"synaptic transmission" evidence=ISO;ISS;TAS] [GO:0007340 "acrosome
reaction" evidence=IEA;ISO] [GO:0007399 "nervous system development"
evidence=ISO;ISS] [GO:0007601 "visual perception" evidence=IEA;ISO]
[GO:0007628 "adult walking behavior" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA;TAS] [GO:0016594 "glycine binding" evidence=ISO;ISS;IDA]
[GO:0016933 "extracellular-glycine-gated ion channel activity"
evidence=ISO;ISS;IDA;TAS] [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA;ISO;ISS] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA;ISO]
[GO:0045211 "postsynaptic membrane" evidence=IEA;TAS] [GO:0050905
"neuromuscular process" evidence=ISO] [GO:0051291 "protein
heterooligomerization" evidence=IDA] [GO:0060012 "synaptic
transmission, glycinergic" evidence=ISO;IDA] [GO:0060013 "righting
reflex" evidence=IEA;ISO] InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236 RGD:2706
GO:GO:0016021 GO:GO:0005886 GO:GO:0051291 GO:GO:0007399 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013 GO:GO:0034707
GO:GO:0007628 GO:GO:0001964 HOVERGEN:HBG051707 GO:GO:0016933 PDB:1T3E
PDB:2FTS PDBsum:1T3E PDBsum:2FTS GeneTree:ENSGT00550000074453
HOGENOM:HOG000231336 GO:GO:0016594 GO:GO:0060012 CTD:2743
eggNOG:NOG295166 KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29
OMA:PTMFKCL EMBL:AJ310839 IPI:IPI00202491 PIR:JH0165
RefSeq:NP_445748.1 UniGene:Rn.94903 ProteinModelPortal:P20781
IntAct:P20781 STRING:P20781 Ensembl:ENSRNOT00000014170 GeneID:25456
KEGG:rno:25456 UCSC:RGD:2706 InParanoid:P20781 BindingDB:P20781
ChEMBL:CHEMBL4126 EvolutionaryTrace:P20781 NextBio:606717
ArrayExpress:P20781 Genevestigator:P20781
GermOnline:ENSRNOG00000010199 Uniprot:P20781
Length = 496
Score = 362 (132.5 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 69/162 (42%), Positives = 102/162 (62%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ AR + A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 170 (64.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 42/147 (28%), Positives = 73/147 (49%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENMT-SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKFVFMALMEYCLVNIVLGDSD 312
+L ++ +++ C +++ L D
Sbjct: 170 DVLVSMR---LSITLSCPLDLTLFPMD 193
Score = 57 (25.1 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID ++R FP F N YW ++
Sbjct: 472 IDLYARALFPFCFLFFNVIYWSIY 495
Score = 45 (20.9 bits), Expect = 3.7e-41, Sum P(3) = 3.7e-41
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 284 DKTILYMVKFVFMALMEYCLVNIVLGDSDLPKPPEPAK 321
D ++ + F F +L+EY +V ++L + PK E K
Sbjct: 330 DVWLIACLLFGFASLVEYAVVQVMLNN---PKRVEAEK 364
>UNIPROTKB|E2QZJ3 [details] [associations]
symbol:GLRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0022824
"transmitter-gated ion channel activity" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008127 InterPro:IPR008129
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01673 PRINTS:PR01675 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0016934 GO:GO:0016594 GO:GO:0022824
Ensembl:ENSCAFT00000018822 Uniprot:E2QZJ3
Length = 374
Score = 403 (146.9 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 78/160 (48%), Positives = 106/160 (66%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C++Q+ES +T +DLIF+W + P+ V E + LPQ L
Sbjct: 165 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILK 224
Query: 66 KNKTAD-CSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ K C++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AAP
Sbjct: 225 EEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 284
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 324
Score = 153 (58.9 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 33/109 (30%), Positives = 51/109 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + S+ E +M Y +IF Q W D RL E
Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAYSEYPDDSL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
L + L ++W+PD FF N K F +T N + + K+ +LY ++
Sbjct: 118 DL-DPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIR 165
Score = 50 (22.7 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY VN V
Sbjct: 327 FVFAALLEYAAVNFV 341
>UNIPROTKB|E7EV50 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4082 EMBL:AC008712
EMBL:AC022120 EMBL:AC091882 EMBL:AC091989 IPI:IPI00982847
ProteinModelPortal:E7EV50 SMR:E7EV50 Ensembl:ENST00000517901
ArrayExpress:E7EV50 Bgee:E7EV50 Uniprot:E7EV50
Length = 411
Score = 313 (115.2 bits), Expect = 4.7e-41, Sum P(3) = 4.7e-41
Identities = 63/163 (38%), Positives = 92/163 (56%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 90 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVT-KIELPQFS 148
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 149 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 208
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 209 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 251
Score = 136 (52.9 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 29/108 (26%), Positives = 57/108 (52%)
Query: 202 HVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPD 258
++ + +D + E +M Y ++F Q W+D RL +P N+T + R+ + +W PD
Sbjct: 2 NIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVAD-----QLWVPD 56
Query: 259 SFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNI 306
++F N K +T+ N + L+ D T+LY ++ A C++++
Sbjct: 57 TYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA---CMMDL 101
Score = 86 (35.3 bits), Expect = 4.7e-41, Sum P(3) = 4.7e-41
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+FFPV+F+ N YW+ +
Sbjct: 386 IDRWSRIFFPVVFSFFNIVYWLYY 409
Score = 64 (27.6 bits), Expect = 4.7e-41, Sum P(3) = 4.7e-41
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVFMAL+EY LVN + P +Q K E AA N
Sbjct: 252 FVFMALLEYALVNYIFFGRG------PQRQKKAAEKAASAN 286
>UNIPROTKB|F1P037 [details] [associations]
symbol:GLRB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0001964
"startle response" evidence=IEA] [GO:0007218 "neuropeptide
signaling pathway" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0016594
"glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0042391 "regulation of membrane potential"
evidence=IEA] [GO:0060012 "synaptic transmission, glycinergic"
evidence=IEA] [GO:0060013 "righting reflex" evidence=IEA]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0042391
GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GeneTree:ENSGT00550000074453 GO:GO:0016594 CTD:2743 KO:K05196
PANTHER:PTHR18945:SF29 OMA:PTMFKCL EMBL:AADN02016519
EMBL:AADN02016520 IPI:IPI00600545 RefSeq:XP_420379.2
UniGene:Gga.14206 ProteinModelPortal:F1P037
Ensembl:ENSGALT00000015305 GeneID:422411 KEGG:gga:422411
NextBio:20825047 Uniprot:F1P037
Length = 497
Score = 358 (131.1 bits), Expect = 7.5e-41, Sum P(3) = 7.5e-41
Identities = 68/162 (41%), Positives = 101/162 (62%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K + +C++ Y TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ AR + A LP VSY+KA+D ++ C
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIVC 336
Score = 165 (63.1 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLLS----YDPRIRPNFKGIPVDVAVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENMT-SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K F +T N +++++D
Sbjct: 110 KWNDPRLKLPNDWRGSDTLTVDPTMFKCLWKPDLFFANEKNANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKFVFMALMEYCLVNIVLGDSD 312
+L ++ +++ C +++ L D
Sbjct: 170 DVLVSMR---LSITLSCPLDLTLFPMD 193
Score = 57 (25.1 bits), Expect = 7.5e-41, Sum P(3) = 7.5e-41
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID ++R FP F N YW ++
Sbjct: 473 IDLYARALFPFCFLFFNVIYWSIY 496
Score = 46 (21.3 bits), Expect = 7.5e-41, Sum P(3) = 7.5e-41
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 284 DKTILYMVKFVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKI 325
D ++ + F F +L+EY +V ++L + PK E A++ KI
Sbjct: 330 DVWLIVCLLFGFASLVEYAVVQVMLNN---PKRIE-AEKAKI 367
>UNIPROTKB|P0C2W5 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 IPI:IPI00823907 UniGene:Bt.63930
ProteinModelPortal:P0C2W5 SMR:P0C2W5 STRING:P0C2W5 Uniprot:P0C2W5
Length = 472
Score = 313 (115.2 bits), Expect = 1.3e-40, Sum P(3) = 1.3e-40
Identities = 63/163 (38%), Positives = 92/163 (56%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 151 RITTTTACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVT-KIELPQFS 209
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 210 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 269
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 270 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 312
Score = 153 (58.9 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 34/111 (30%), Positives = 56/111 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 43 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 102
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY
Sbjct: 103 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLY 148
Score = 86 (35.3 bits), Expect = 1.3e-40, Sum P(3) = 1.3e-40
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+FFPV+F+ N YW+ +
Sbjct: 447 IDRWSRIFFPVVFSFFNIVYWLYY 470
Score = 64 (27.6 bits), Expect = 1.3e-40, Sum P(3) = 1.3e-40
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVFMAL+EY LVN + P +Q K E AA N
Sbjct: 313 FVFMALLEYALVNYIFFGRG------PQRQKKAAEKAASAN 347
>UNIPROTKB|F1NMN1 [details] [associations]
symbol:GLRA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005887 "integral to plasma membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=IEA] [GO:0016934
"extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0022824 "transmitter-gated ion channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR008130 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01673 PRINTS:PR01676 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934
GeneTree:ENSGT00550000074453 GO:GO:0016594 GO:GO:0022824
EMBL:AC145915 IPI:IPI00572144 Ensembl:ENSGALT00000017534
OMA:HANFHEV Uniprot:F1NMN1
Length = 444
Score = 382 (139.5 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 77/162 (47%), Positives = 104/162 (64%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLTL LSC M+ +P D Q C +Q+ES +T +DLIF+W + + V E + LPQ L
Sbjct: 159 RLTLILSCPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEKGAVQVAEGLTLPQFLLK 218
Query: 66 KNKT-ADCSQVYST--GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ K C++ Y+T G FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +A
Sbjct: 219 EEKDLCYCTKHYNTEKGKFTCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDA 278
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
APAR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 279 APARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 320
Score = 166 (63.5 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 46/151 (30%), Positives = 66/151 (43%)
Query: 149 PPVSYL---KAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTV 205
PPV L K D+ S S S F D L YD P +G P V ++ +
Sbjct: 15 PPVLSLVATKETDSARSRSMPMSPS-DFLDKLMGRMSGYDARIRPNFKGPPVNVTCNIFI 73
Query: 206 MGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAK 265
SI E +M Y +IF Q W D RL E L + L ++W+PD FF N K
Sbjct: 74 NSFGSIAETTMDYRVNIFLRQNWNDPRLAYSEYPDDSLDL-DPSMLDSIWKPDLFFANEK 132
Query: 266 AVTFQTMTIPNHYVWLYKDKTILYMVKFVFM 296
F +T N + ++K+ +LY ++ +
Sbjct: 133 GANFHEVTTDNKLLRIFKNGNVLYSIRLTLI 163
Score = 66 (28.3 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID SR FP+ F I N YW+++
Sbjct: 411 IDTISRACFPLAFLIFNIFYWVIY 434
>UNIPROTKB|L7N0C0 [details] [associations]
symbol:GABRB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
GeneTree:ENSGT00630000089685 EMBL:AAEX03003043
Ensembl:ENSCAFT00000015972 Uniprot:L7N0C0
Length = 474
Score = 313 (115.2 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 63/163 (38%), Positives = 92/163 (56%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVT-KIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 155 (59.6 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 159
Query: 299 MEYCLVNI 306
C++++
Sbjct: 160 ---CMMDL 164
Score = 86 (35.3 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+FFPV+F+ N YW+ +
Sbjct: 449 IDRWSRIFFPVVFSFFNIVYWLYY 472
Score = 64 (27.6 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVFMAL+EY LVN + P +Q K E AA N
Sbjct: 315 FVFMALLEYALVNYIFFGRG------PQRQKKAAEKAASAN 349
>RGD|2650 [details] [associations]
symbol:Gabrb2 "gamma-aminobutyric acid (GABA) A receptor, beta 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IMP;TAS] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=IMP] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=TAS] [GO:0007605
"sensory perception of sound" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=ISO] [GO:0051932 "synaptic transmission,
GABAergic" evidence=IDA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA;ISO] [GO:0060384 "innervation"
evidence=IEA;ISO] [GO:0090102 "cochlea development" evidence=IEA;ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160
PROSITE:PS00236 RGD:2650 GO:GO:0005829 GO:GO:0005886 GO:GO:0016020
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0007605 GO:GO:0034707 GO:GO:0005254 GO:GO:0090102
GO:GO:0051932 GO:GO:0060119 HOVERGEN:HBG051707 GO:GO:0005237
GO:GO:0060384 eggNOG:NOG77438 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231335 KO:K05181 OrthoDB:EOG45756F CTD:2561 OMA:TSSIQYR
EMBL:X15467 EMBL:AY574251 IPI:IPI00209269 PIR:S04465
RefSeq:NP_037089.1 UniGene:Rn.207158 ProteinModelPortal:P63138
SMR:P63138 IntAct:P63138 STRING:P63138 PhosphoSite:P63138
PRIDE:P63138 Ensembl:ENSRNOT00000004970 GeneID:25451 KEGG:rno:25451
UCSC:RGD:2650 InParanoid:P63138 BindingDB:P63138 ChEMBL:CHEMBL295
NextBio:606701 Genevestigator:P63138 GermOnline:ENSRNOG00000003680
Uniprot:P63138
Length = 474
Score = 313 (115.2 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 63/163 (38%), Positives = 92/163 (56%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVT-KIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 155 (59.6 bits), Expect = 1.0e-15, Sum P(3) = 1.0e-15
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 159
Query: 299 MEYCLVNI 306
C++++
Sbjct: 160 ---CMMDL 164
Score = 86 (35.3 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+FFPV+F+ N YW+ +
Sbjct: 449 IDRWSRIFFPVVFSFFNIVYWLYY 472
Score = 64 (27.6 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVFMAL+EY LVN + P +Q K E AA N
Sbjct: 315 FVFMALLEYALVNYIFFGRG------PQRQKKAAEKAANAN 349
>UNIPROTKB|F1NB54 [details] [associations]
symbol:GABRB2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 OMA:TSSIQYR EMBL:AADN02035869
EMBL:AADN02035870 EMBL:AADN02035871 EMBL:AADN02035872
EMBL:AADN02035873 EMBL:AADN02035874 IPI:IPI00587146
Ensembl:ENSGALT00000011745 Uniprot:F1NB54
Length = 475
Score = 308 (113.5 bits), Expect = 7.5e-40, Sum P(3) = 7.5e-40
Identities = 61/162 (37%), Positives = 92/162 (56%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 156 (60.0 bits), Expect = 8.1e-16, Sum P(3) = 8.1e-16
Identities = 43/156 (27%), Positives = 75/156 (48%)
Query: 154 LKAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDE 213
+ AV A S S+ SL + + K YD P G P V ++ + +D + E
Sbjct: 19 IAAVCAQSSVNDPSNMSLV-KETVDRLLKGYDIRLRPDFGGPPVAVGMNIDIASIDMVSE 77
Query: 214 NSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQ 270
+M Y ++F Q W+D RL +P N+T + R+ + +W PD++F N K
Sbjct: 78 VNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVH 132
Query: 271 TMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNI 306
+T+ N + L+ D T+LY ++ A C++++
Sbjct: 133 GVTVKNRMIRLHPDGTVLYGLRITTTAA---CMMDL 165
Score = 86 (35.3 bits), Expect = 7.5e-40, Sum P(3) = 7.5e-40
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+FFPV+F+ N YW+ +
Sbjct: 450 IDRWSRIFFPVVFSFFNIVYWLYY 473
Score = 64 (27.6 bits), Expect = 7.5e-40, Sum P(3) = 7.5e-40
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVFMAL+EY LVN + P +Q K E AA N
Sbjct: 316 FVFMALLEYALVNYIFFGRG------PQRQKKAAEKAASAN 350
>UNIPROTKB|P47870 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0090102 "cochlea development"
evidence=IEA] [GO:0005237 "inhibitory extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0006810
"transport" evidence=TAS] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] [GO:0051932 "synaptic
transmission, GABAergic" evidence=ISS] [GO:0004890 "GABA-A receptor
activity" evidence=ISS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005829 GO:GO:0005887
EMBL:CH471062 GO:GO:0030054 GO:GO:0045211 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0007605 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
GO:GO:0090102 GO:GO:0051932 DrugBank:DB00683 GO:GO:0060119
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690 GO:GO:0005237
TCDB:1.A.9.5.2 GO:GO:0060384 eggNOG:NOG77438 KO:K05181
OrthoDB:EOG45756F EMBL:S67368 EMBL:S77554 EMBL:S77553 EMBL:GU086163
EMBL:GU086164 EMBL:AK289730 EMBL:AK289815 EMBL:BC099705
EMBL:BC099719 EMBL:BC105639 IPI:IPI00026639 IPI:IPI00216394
IPI:IPI00954901 IPI:IPI00955985 PIR:I52656 RefSeq:NP_000804.1
RefSeq:NP_068711.1 UniGene:Hs.303527 ProteinModelPortal:P47870
SMR:P47870 MINT:MINT-268409 STRING:P47870 PhosphoSite:P47870
DMDM:292495010 PaxDb:P47870 PeptideAtlas:P47870 PRIDE:P47870
Ensembl:ENST00000274547 Ensembl:ENST00000353437
Ensembl:ENST00000393959 Ensembl:ENST00000520240 GeneID:2561
KEGG:hsa:2561 UCSC:uc003lyr.1 UCSC:uc003lys.1 UCSC:uc021yhg.1
CTD:2561 GeneCards:GC05M160715 HGNC:HGNC:4082 HPA:CAB001964
MIM:600232 neXtProt:NX_P47870 PharmGKB:PA28496 OMA:TSSIQYR
PhylomeDB:P47870 BindingDB:P47870 ChEMBL:CHEMBL1920 GenomeRNAi:2561
NextBio:10115 ArrayExpress:P47870 Bgee:P47870 CleanEx:HS_GABRB2
Genevestigator:P47870 GermOnline:ENSG00000145864 Uniprot:P47870
Length = 512
Score = 313 (115.2 bits), Expect = 7.9e-40, Sum P(3) = 7.9e-40
Identities = 63/163 (38%), Positives = 92/163 (56%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVT-KIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 155 (59.6 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 159
Query: 299 MEYCLVNI 306
C++++
Sbjct: 160 ---CMMDL 164
Score = 86 (35.3 bits), Expect = 7.9e-40, Sum P(3) = 7.9e-40
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+FFPV+F+ N YW+ +
Sbjct: 487 IDRWSRIFFPVVFSFFNIVYWLYY 510
Score = 64 (27.6 bits), Expect = 7.9e-40, Sum P(3) = 7.9e-40
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVFMAL+EY LVN + P +Q K E AA N
Sbjct: 315 FVFMALLEYALVNYIFFGRG------PQRQKKAAEKAASAN 349
>MGI|MGI:95620 [details] [associations]
symbol:Gabrb2 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=ISO] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007605 "sensory perception
of sound" evidence=IMP] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISO] [GO:0060119 "inner ear receptor cell
development" evidence=IMP] [GO:0060384 "innervation" evidence=IMP]
[GO:0090102 "cochlea development" evidence=IMP] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
MGI:MGI:95620 GO:GO:0005829 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007605
GO:GO:0034707 GO:GO:0005254 GO:GO:0090102 GO:GO:0060119
HOVERGEN:HBG051707 GO:GO:0005237 GO:GO:0060384 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F CTD:2561 OMA:TSSIQYR EMBL:U14419 EMBL:GU086167
EMBL:AK090279 EMBL:AL627444 EMBL:AL645964 EMBL:CH466609
EMBL:BC145973 EMBL:BC145975 IPI:IPI00323554 IPI:IPI00955696
PIR:S53531 RefSeq:NP_032096.1 UniGene:Mm.338723 UniGene:Mm.471870
ProteinModelPortal:P63137 SMR:P63137 STRING:P63137
PhosphoSite:P63137 PRIDE:P63137 Ensembl:ENSMUST00000007797
GeneID:14401 KEGG:mmu:14401 UCSC:uc007imi.1 InParanoid:A6H6R7
ChEMBL:CHEMBL4545 NextBio:285949 Bgee:P63137 Genevestigator:P63137
GermOnline:ENSMUSG00000007653 Uniprot:P63137
Length = 512
Score = 313 (115.2 bits), Expect = 7.9e-40, Sum P(3) = 7.9e-40
Identities = 63/163 (38%), Positives = 92/163 (56%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVT-KIELPQFS 211
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 271
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 272 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 155 (59.6 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 159
Query: 299 MEYCLVNI 306
C++++
Sbjct: 160 ---CMMDL 164
Score = 86 (35.3 bits), Expect = 7.9e-40, Sum P(3) = 7.9e-40
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+FFPV+F+ N YW+ +
Sbjct: 487 IDRWSRIFFPVVFSFFNIVYWLYY 510
Score = 64 (27.6 bits), Expect = 7.9e-40, Sum P(3) = 7.9e-40
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVFMAL+EY LVN + P +Q K E AA N
Sbjct: 315 FVFMALLEYALVNYIFFGRG------PQRQKKAAEKAANAN 349
>UNIPROTKB|E1BFC0 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9913 "Bos taurus" [GO:0090102 "cochlea development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007605 GO:GO:0090102
GO:GO:0060119 GO:GO:0060384 GeneTree:ENSGT00630000089685
OMA:TSSIQYR EMBL:DAAA02020899 EMBL:DAAA02020900 EMBL:DAAA02020901
EMBL:DAAA02020902 EMBL:DAAA02020903 EMBL:DAAA02020904
EMBL:DAAA02020905 IPI:IPI01001787 ProteinModelPortal:E1BFC0
Ensembl:ENSBTAT00000024736 BindingDB:E1BFC0 Uniprot:E1BFC0
Length = 519
Score = 313 (115.2 bits), Expect = 9.9e-40, Sum P(3) = 9.9e-40
Identities = 63/163 (38%), Positives = 92/163 (56%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T +C M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ
Sbjct: 160 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVT-KIELPQFS 218
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+V K V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 219 IVDYKLITKKVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDAS 278
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 279 AARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 321
Score = 148 (57.2 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 32/116 (27%), Positives = 60/116 (51%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDW 250
G P V ++ + +D + E +M Y ++F Q W+D RL +P N+T + R+ +
Sbjct: 64 GPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVAD--- 120
Query: 251 LKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNI 306
+W PD++F N K +T+ N + L+ D T+LY ++ A C++++
Sbjct: 121 --QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA---CMMDL 171
Score = 86 (35.3 bits), Expect = 9.9e-40, Sum P(3) = 9.9e-40
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+FFPV+F+ N YW+ +
Sbjct: 494 IDRWSRIFFPVVFSFFNIVYWLYY 517
Score = 64 (27.6 bits), Expect = 9.9e-40, Sum P(3) = 9.9e-40
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVFMAL+EY LVN + P +Q K E AA N
Sbjct: 322 FVFMALLEYALVNYIFFGRG------PQRQKKAAEKAASAN 356
>ZFIN|ZDB-GENE-090313-230 [details] [associations]
symbol:si:dkey-20i10.4 "si:dkey-20i10.4"
species:7955 "Danio rerio" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
ZFIN:ZDB-GENE-090313-230 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685 EMBL:CT025771
EMBL:CU469104 IPI:IPI00923251 ProteinModelPortal:F1QPW7
Ensembl:ENSDART00000108535 Uniprot:F1QPW7
Length = 484
Score = 318 (117.0 bits), Expect = 3.1e-39, Sum P(3) = 3.1e-39
Identities = 59/161 (36%), Positives = 92/161 (57%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + IELPQ ++
Sbjct: 162 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWQGGSSVTGVDNIELPQFSII 221
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
KT V++TG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+ A
Sbjct: 222 DYKTLSKKVVFATGSYPRLSLSFKLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAA 281
Query: 126 RXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
R + + +LP + Y+KA+D ++ C V
Sbjct: 282 RVALGITTVLTMTTINTHLRETLPKIPYVKAIDIYLMGCFV 322
Score = 151 (58.2 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + + +D + E +M Y ++F Q+W+D RL +P N
Sbjct: 54 KGYDIRLRPDFGGPPVDVGMSIDISSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLN 113
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 114 LTLDNRVAD-----QLWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 168
Query: 299 MEYCLVNI 306
C++++
Sbjct: 169 ---CMMDL 173
Score = 71 (30.1 bits), Expect = 3.1e-39, Sum P(3) = 3.1e-39
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID++SRV FP+ + N YW+ +
Sbjct: 459 IDKWSRVIFPITYTFFNLVYWLYY 482
Score = 62 (26.9 bits), Expect = 3.1e-39, Sum P(3) = 3.1e-39
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVF+AL+EY VN + P Q K+ E AAK N
Sbjct: 323 FVFLALLEYAFVNYIFFGRG------PHLQKKVAEKAAKSN 357
>UNIPROTKB|Q5JXX5 [details] [associations]
symbol:GLRA4 "Glycine receptor subunit alpha-4"
species:9606 "Homo sapiens" [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0022824 "transmitter-gated ion channel activity" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] Reactome:REACT_15518 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008127 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01673 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG265706 HOGENOM:HOG000231336
GO:GO:0016594 GO:GO:0022824 OrthoDB:EOG4WWRJJ EMBL:Z93848
EMBL:AL049610 IPI:IPI00456931 RefSeq:NP_001019623.2
UniGene:Hs.533289 ProteinModelPortal:Q5JXX5 SMR:Q5JXX5
STRING:Q5JXX5 PhosphoSite:Q5JXX5 DMDM:262527577 PRIDE:Q5JXX5
Ensembl:ENST00000372617 GeneID:441509 KEGG:hsa:441509
UCSC:uc010nou.2 CTD:441509 GeneCards:GC0XM102962 HGNC:HGNC:31715
HPA:HPA044759 neXtProt:NX_Q5JXX5 PharmGKB:PA142671731
InParanoid:Q5JXX5 KO:K05271 OMA:IQESRFY GenomeRNAi:441509
NextBio:110250 ArrayExpress:Q5JXX5 Bgee:Q5JXX5 CleanEx:HS_GLRA4
Genevestigator:Q5JXX5 Uniprot:Q5JXX5
Length = 417
Score = 386 (140.9 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 77/161 (47%), Positives = 104/161 (64%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
RLTL LSC M+ +P D Q C++Q+ES +T DL+F+W + P + V E + LPQ L
Sbjct: 165 RLTLILSCLMDLKNFPMDIQTCTMQLESFGYTMKDLVFEWLEDAPAVQVAEGLTLPQFIL 224
Query: 65 VKNKTADC-SQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K C ++ Y+TG FTC+EV F L+R++GYYL YIP+ LIVI+SWVSFWI +AA
Sbjct: 225 RDEKDLGCCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAA 284
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR Q + S+ASLP VSY+KA+D +M+ C
Sbjct: 285 PARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVC 325
Score = 160 (61.4 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 35/123 (28%), Positives = 60/123 (48%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +G P V ++ + SI + +M Y ++F Q W D RL E
Sbjct: 58 YDARIRPNFKGPPVNVTCNIFINSFSSITKTTMDYRVNVFLRQQWNDPRLSYREYPDDSL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
L + L ++W+PD FF N K F +T N + ++K+ +LY ++ + L+ CL
Sbjct: 118 DL-DPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIR---LTLILSCL 173
Query: 304 VNI 306
+++
Sbjct: 174 MDL 176
Score = 49 (22.3 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
FVF AL+EY +N V
Sbjct: 328 FVFAALLEYAAINFV 342
>UNIPROTKB|B7Z279 [details] [associations]
symbol:GABRB2 "Gamma-aminobutyric acid receptor subunit
beta-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00253 PRINTS:PR01160 GO:GO:0016021 GO:GO:0005886
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG051707 HOGENOM:HOG000231335 OrthoDB:EOG45756F
UniGene:Hs.303527 HGNC:HGNC:4082 EMBL:AC008712 EMBL:AC022120
EMBL:AC091882 EMBL:AC091989 EMBL:AK294437 IPI:IPI00975760
SMR:B7Z279 STRING:B7Z279 Ensembl:ENST00000517547 UCSC:uc011deh.1
Uniprot:B7Z279
Length = 314
Score = 295 (108.9 bits), Expect = 3.5e-39, Sum P(3) = 3.5e-39
Identities = 60/154 (38%), Positives = 87/154 (56%)
Query: 15 MNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQLVKNKTADC 72
M+ YP D Q C+L++ES +TTDD+ F W D V KIELPQ +V K
Sbjct: 2 MDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGDDNAVTGVT-KIELPQFSIVDYKLITK 60
Query: 73 SQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARXXXXXX 132
V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+ AR
Sbjct: 61 KVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGIT 120
Query: 133 XXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
+ + +LP + Y+KA+D ++ C V
Sbjct: 121 TVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 154
Score = 86 (35.3 bits), Expect = 3.5e-39, Sum P(3) = 3.5e-39
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+FFPV+F+ N YW+ +
Sbjct: 289 IDRWSRIFFPVVFSFFNIVYWLYY 312
Score = 64 (27.6 bits), Expect = 3.5e-39, Sum P(3) = 3.5e-39
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVFMAL+EY LVN + P +Q K E AA N
Sbjct: 155 FVFMALLEYALVNYIFFGRG------PQRQKKAAEKAASAN 189
>UNIPROTKB|E1BW41 [details] [associations]
symbol:LOC100858201 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
EMBL:AADN02017665 EMBL:AADN02017666 EMBL:AADN02017667
EMBL:AADN02017668 EMBL:AC145944 IPI:IPI00589447
Ensembl:ENSGALT00000027028 ArrayExpress:E1BW41 Uniprot:E1BW41
Length = 397
Score = 308 (113.5 bits), Expect = 4.4e-39, Sum P(3) = 4.4e-39
Identities = 59/162 (36%), Positives = 94/162 (58%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 75 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSI 134
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+ + + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 135 VEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 194
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 195 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 236
Score = 116 (45.9 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 216 MTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTM 272
M Y ++F Q W+D RL +P N+T + R+ + +W PD++F N K +
Sbjct: 1 MDYTLTMYFQQYWRDKRLAYAGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGV 55
Query: 273 TIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNI 306
T+ N + L+ D T+LY ++ A C++++
Sbjct: 56 TVKNRMIRLHPDGTVLYGLRITTTAA---CMMDL 86
Score = 71 (30.1 bits), Expect = 4.4e-39, Sum P(3) = 4.4e-39
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+ FP F++ N YW+ +
Sbjct: 372 IDRWSRMVFPFTFSLFNLIYWLYY 395
Score = 65 (27.9 bits), Expect = 4.4e-39, Sum P(3) = 4.4e-39
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVF+AL+EY VN + K P+ +Q K+ E +AK N
Sbjct: 237 FVFLALLEYAFVNYIF----FGKGPQ--RQKKLAEKSAKAN 271
>UNIPROTKB|J9P3X1 [details] [associations]
symbol:GABRB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FYAIYET EMBL:AAEX03002176 EMBL:AAEX03002177 EMBL:AAEX03002178
Ensembl:ENSCAFT00000043201 Uniprot:J9P3X1
Length = 409
Score = 312 (114.9 bits), Expect = 5.6e-39, Sum P(3) = 5.6e-39
Identities = 59/162 (36%), Positives = 95/162 (58%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 90 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 149
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 150 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 209
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 210 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 251
Score = 134 (52.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 29/108 (26%), Positives = 57/108 (52%)
Query: 202 HVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPD 258
++ + +D + E +M Y ++F Q W+D RL +P N+T + R+ + +W PD
Sbjct: 2 NIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPD 56
Query: 259 SFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNI 306
++F N K +T+ N + L+ D T+LY ++ A C++++
Sbjct: 57 TYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA---CMMDL 101
Score = 74 (31.1 bits), Expect = 5.6e-39, Sum P(3) = 5.6e-39
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+ FP F++ N YW+ +
Sbjct: 384 IDRWSRIVFPFTFSLFNLVYWLYY 407
Score = 57 (25.1 bits), Expect = 5.6e-39, Sum P(3) = 5.6e-39
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAK-ENAR 335
FVF+AL+EY VN + P +Q K+ E AK +N R
Sbjct: 252 FVFLALLEYAFVNYIFFGRG------PQRQKKLAEKTAKAKNDR 289
>UNIPROTKB|F1LRQ0 [details] [associations]
symbol:Gabrb3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
RGD:2651 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 IPI:IPI00950928
Ensembl:ENSRNOT00000065223 ArrayExpress:F1LRQ0 Uniprot:F1LRQ0
Length = 402
Score = 312 (114.9 bits), Expect = 5.6e-39, Sum P(3) = 5.6e-39
Identities = 59/162 (36%), Positives = 95/162 (58%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 83 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 142
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 143 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 202
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 203 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 244
Score = 122 (48.0 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 29/102 (28%), Positives = 52/102 (50%)
Query: 208 LDSIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNA 264
+D E M Y ++F Q W+D RL +P N+T + R+ + +W PD++F N
Sbjct: 1 MDMFAEVCMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLND 55
Query: 265 KAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNI 306
K +T+ N + L+ D T+LY ++ A C++++
Sbjct: 56 KKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA---CMMDL 94
Score = 74 (31.1 bits), Expect = 5.6e-39, Sum P(3) = 5.6e-39
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+ FP F++ N YW+ +
Sbjct: 377 IDRWSRIVFPFTFSLFNLVYWLYY 400
Score = 57 (25.1 bits), Expect = 5.6e-39, Sum P(3) = 5.6e-39
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAK-ENAR 335
FVF+AL+EY VN + P +Q K+ E AK +N R
Sbjct: 245 FVFLALLEYAFVNYIFFGRG------PQRQKKLAEKTAKAKNDR 282
>UNIPROTKB|F5H3D2 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 KO:K05181
CTD:2562 RefSeq:NP_001178249.1 UniGene:Hs.302352 DNASU:2562
GeneID:2562 KEGG:hsa:2562 HGNC:HGNC:4083 ChiTaRS:GABRB3
GenomeRNAi:2562 NextBio:10121 EMBL:AC009878 EMBL:AC011196
EMBL:AC104569 EMBL:AC127511 EMBL:AC135999 EMBL:AC145167
EMBL:AC145196 EMBL:EU606048 IPI:IPI00975640
ProteinModelPortal:F5H3D2 SMR:F5H3D2 PRIDE:F5H3D2
Ensembl:ENST00000545868 ArrayExpress:F5H3D2 Bgee:F5H3D2
Uniprot:F5H3D2
Length = 388
Score = 312 (114.9 bits), Expect = 5.6e-39, Sum P(3) = 5.6e-39
Identities = 59/162 (36%), Positives = 95/162 (58%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 69 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 128
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 129 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 188
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 189 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 230
Score = 107 (42.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 25/88 (28%), Positives = 47/88 (53%)
Query: 222 IFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHY 278
++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+ N
Sbjct: 1 MYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRM 55
Query: 279 VWLYKDKTILYMVKFVFMALMEYCLVNI 306
+ L+ D T+LY ++ A C++++
Sbjct: 56 IRLHPDGTVLYGLRITTTAA---CMMDL 80
Score = 74 (31.1 bits), Expect = 5.6e-39, Sum P(3) = 5.6e-39
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+ FP F++ N YW+ +
Sbjct: 363 IDRWSRIVFPFTFSLFNLVYWLYY 386
Score = 57 (25.1 bits), Expect = 5.6e-39, Sum P(3) = 5.6e-39
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAK-ENAR 335
FVF+AL+EY VN + P +Q K+ E AK +N R
Sbjct: 231 FVFLALLEYAFVNYIFFGRG------PQRQKKLAEKTAKAKNDR 268
>UNIPROTKB|F5GXV5 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:AC107383 HGNC:HGNC:4081
EMBL:AC097712 EMBL:AC105394 EMBL:AC107392 IPI:IPI01009264
ProteinModelPortal:F5GXV5 SMR:F5GXV5 Ensembl:ENST00000538619
UCSC:uc011bze.2 ArrayExpress:F5GXV5 Bgee:F5GXV5 Uniprot:F5GXV5
Length = 404
Score = 302 (111.4 bits), Expect = 7.2e-39, Sum P(3) = 7.2e-39
Identities = 60/162 (37%), Positives = 90/162 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 84 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 143
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 144 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 203
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + +LP + Y+KA+D ++ C V
Sbjct: 204 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 245
Score = 119 (46.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 28/95 (29%), Positives = 50/95 (52%)
Query: 215 SMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQT 271
S Y ++F Q+WKD RL +P N+T + R+ + +W PD++F N K
Sbjct: 9 SEDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHG 63
Query: 272 MTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNI 306
+T+ N + L+ D T+LY ++ A C++++
Sbjct: 64 VTVKNRMIRLHPDGTVLYGLRITTTAA---CMMDL 95
Score = 81 (33.6 bits), Expect = 7.2e-39, Sum P(3) = 7.2e-39
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMF 388
+ID++SR+FFP+ F++ N YW+ +
Sbjct: 378 SIDKWSRMFFPITFSLFNVVYWLYY 402
Score = 59 (25.8 bits), Expect = 7.2e-39, Sum P(3) = 7.2e-39
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDK 324
FVF+AL+EY VN + P+ +KQD+
Sbjct: 246 FVFLALLEYAFVNYIFFGKG-PQKKGASKQDQ 276
>UNIPROTKB|F1PEG2 [details] [associations]
symbol:GABRB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:YRKPMSS EMBL:AAEX03009038 Ensembl:ENSCAFT00000002993
Uniprot:F1PEG2
Length = 390
Score = 302 (111.4 bits), Expect = 7.2e-39, Sum P(3) = 7.2e-39
Identities = 60/162 (37%), Positives = 90/162 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 69 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 128
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 129 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 188
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + +LP + Y+KA+D ++ C V
Sbjct: 189 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 230
Score = 113 (44.8 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 26/88 (29%), Positives = 48/88 (54%)
Query: 222 IFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHY 278
++F Q+WKD RL +P N+T + R+ + +W PD++F N K +T+ N
Sbjct: 1 MYFQQSWKDKRLSYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRM 55
Query: 279 VWLYKDKTILYMVKFVFMALMEYCLVNI 306
+ L+ D T+LY ++ A C++++
Sbjct: 56 IRLHPDGTVLYGLRITTTAA---CMMDL 80
Score = 81 (33.6 bits), Expect = 7.2e-39, Sum P(3) = 7.2e-39
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMF 388
+ID++SR+FFP+ F++ N YW+ +
Sbjct: 364 SIDKWSRMFFPITFSLFNVVYWLYY 388
Score = 59 (25.8 bits), Expect = 7.2e-39, Sum P(3) = 7.2e-39
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDK 324
FVF+AL+EY VN + P+ +KQD+
Sbjct: 231 FVFLALLEYAFVNYIFFGKG-PQKKGASKQDQ 261
>UNIPROTKB|F1MAU5 [details] [associations]
symbol:GABRB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0007605 "sensory perception of
sound" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FYAIYET EMBL:DAAA02051680 EMBL:DAAA02051681 EMBL:DAAA02051682
IPI:IPI00695874 Ensembl:ENSBTAT00000017858 ArrayExpress:F1MAU5
Uniprot:F1MAU5
Length = 392
Score = 312 (114.9 bits), Expect = 9.1e-39, Sum P(3) = 9.1e-39
Identities = 59/162 (36%), Positives = 95/162 (58%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 74 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 133
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 134 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 193
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 194 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 235
Score = 112 (44.5 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 26/92 (28%), Positives = 48/92 (52%)
Query: 218 YAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y ++F Q W+D RL +P N+T + R+ + +W PD++F N K +T+
Sbjct: 2 YTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTV 56
Query: 275 PNHYVWLYKDKTILYMVKFVFMALMEYCLVNI 306
N + L+ D T+LY ++ A C++++
Sbjct: 57 KNRMIRLHPDGTVLYGLRITTTAA---CMMDL 85
Score = 74 (31.1 bits), Expect = 9.1e-39, Sum P(3) = 9.1e-39
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+ FP F++ N YW+ +
Sbjct: 367 IDRWSRIVFPFTFSLFNLVYWLYY 390
Score = 55 (24.4 bits), Expect = 9.1e-39, Sum P(3) = 9.1e-39
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAK-ENAR 335
FVF+AL+EY VN + P +Q K+ E AK +N R
Sbjct: 236 FVFLALLEYAFVNYIFFGRG------PQRQKKLAEKNAKAKNDR 273
>UNIPROTKB|F1MDL0 [details] [associations]
symbol:GLRB "Glycine receptor subunit beta" species:9913
"Bos taurus" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0060012 "synaptic transmission, glycinergic" evidence=IEA]
[GO:0042391 "regulation of membrane potential" evidence=IEA]
[GO:0016934 "extracellular-glycine-gated chloride channel activity"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0007628 "adult walking behavior" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007340 "acrosome reaction"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008060
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR01677 PROSITE:PS00236 GO:GO:0016021 GO:GO:0007399
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007218 GO:GO:0007601
GO:GO:0042391 GO:GO:0016934 GO:GO:0007340 GO:GO:0060013
GO:GO:0007628 GO:GO:0001964 GeneTree:ENSGT00550000074453
GO:GO:0016594 GO:GO:0060012 PANTHER:PTHR18945:SF29 OMA:PTMFKCL
EMBL:DAAA02044907 EMBL:DAAA02044902 EMBL:DAAA02044903
EMBL:DAAA02044904 EMBL:DAAA02044905 EMBL:DAAA02044906
IPI:IPI01028074 Ensembl:ENSBTAT00000029010 Uniprot:F1MDL0
Length = 497
Score = 339 (124.4 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 67/162 (41%), Positives = 97/162 (59%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ + EKI LPQ +
Sbjct: 176 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK 234
Query: 66 KN--KTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
K C + T +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 235 YEGLKFLGCHLYFKGTWYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 294
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ AR + A LP VSY+KA+D ++ AC
Sbjct: 295 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIAC 336
Score = 170 (64.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 42/147 (28%), Positives = 73/147 (49%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+STS N +L YD P +G P V ++ + SI E +M Y +IF Q
Sbjct: 54 NSTSNILNRLLVS----YDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQ 109
Query: 227 TWKDHRLRLPENMT-SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
W D RL+LP + S+ ++ K +W+PD FF N K+ F +T N +++++D
Sbjct: 110 KWNDPRLKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDG 169
Query: 286 TILYMVKFVFMALMEYCLVNIVLGDSD 312
+L ++ +++ C +++ L D
Sbjct: 170 DVLVSMR---LSITLSCPLDLTLFPMD 193
Score = 57 (25.1 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID ++R FP F N YW ++
Sbjct: 473 IDLYARALFPFCFLFFNVIYWSIY 496
Score = 45 (20.9 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 284 DKTILYMVKFVFMALMEYCLVNIVLGDSDLPKPPEPAK 321
D ++ + F F +L+EY +V ++L + PK E K
Sbjct: 330 DVWLIACLLFGFASLVEYAVVQVMLNN---PKRVEAEK 364
>UNIPROTKB|P28472 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0060119 "inner ear
receptor cell development" evidence=IEA] [GO:0060384 "innervation"
evidence=IEA] [GO:0090102 "cochlea development" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005887 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 Orphanet:106 Orphanet:64280
DrugBank:DB00683 HOVERGEN:HBG051707 DrugBank:DB00189
DrugBank:DB00690 eggNOG:NOG77438 KO:K05181 OrthoDB:EOG45756F
CTD:2562 EMBL:M82919 EMBL:BC010641 EMBL:L04311 IPI:IPI00003467
IPI:IPI00217235 PIR:A55275 PIR:B45468 RefSeq:NP_000805.1
RefSeq:NP_001178249.1 RefSeq:NP_001178250.1 RefSeq:NP_068712.1
UniGene:Hs.302352 ProteinModelPortal:P28472 SMR:P28472
IntAct:P28472 STRING:P28472 PhosphoSite:P28472 DMDM:120773
PaxDb:P28472 PRIDE:P28472 DNASU:2562 Ensembl:ENST00000299267
Ensembl:ENST00000311550 GeneID:2562 KEGG:hsa:2562 UCSC:uc001zaz.3
UCSC:uc001zba.3 GeneCards:GC15M026788 HGNC:HGNC:4083 MIM:137192
MIM:612269 neXtProt:NX_P28472 PharmGKB:PA28497 PhylomeDB:P28472
BindingDB:P28472 ChEMBL:CHEMBL1847 ChiTaRS:GABRB3 GenomeRNAi:2562
NextBio:10121 ArrayExpress:P28472 Bgee:P28472 CleanEx:HS_GABRB3
Genevestigator:P28472 GermOnline:ENSG00000166206 Uniprot:P28472
Length = 473
Score = 312 (114.9 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 59/162 (36%), Positives = 95/162 (58%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 153 (58.9 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 160
Query: 299 MEYCLVNI 306
C++++
Sbjct: 161 ---CMMDL 165
Score = 74 (31.1 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+ FP F++ N YW+ +
Sbjct: 448 IDRWSRIVFPFTFSLFNLVYWLYY 471
Score = 57 (25.1 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAK-ENAR 335
FVF+AL+EY VN + P +Q K+ E AK +N R
Sbjct: 316 FVFLALLEYAFVNYIFFGRG------PQRQKKLAEKTAKAKNDR 353
>MGI|MGI:95621 [details] [associations]
symbol:Gabrb3 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 3" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0035612 "AP-2 adaptor complex binding" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048666 "neuron development" evidence=IMP] [GO:0051932
"synaptic transmission, GABAergic" evidence=ISO] [GO:0060077
"inhibitory synapse" evidence=ISO] [GO:0060119 "inner ear receptor
cell development" evidence=IMP] [GO:0060384 "innervation"
evidence=IMP] [GO:0090102 "cochlea development" evidence=IMP]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 MGI:MGI:95621 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007605
GO:GO:0034707 GO:GO:0005254 GO:GO:0090102 GO:GO:0060119
HOVERGEN:HBG051707 GO:GO:0060384 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F CTD:2562 ChiTaRS:GABRB3 EMBL:U14420 EMBL:AK039070
EMBL:AK147247 IPI:IPI00130546 PIR:S53532 RefSeq:NP_032097.1
UniGene:Mm.8004 ProteinModelPortal:P63080 SMR:P63080 STRING:P63080
PaxDb:P63080 PRIDE:P63080 DNASU:14402 Ensembl:ENSMUST00000039697
GeneID:14402 KEGG:mmu:14402 UCSC:uc011xte.1 BindingDB:P63080
ChEMBL:CHEMBL4231 NextBio:285953 Bgee:P63080 Genevestigator:P63080
GermOnline:ENSMUSG00000033676 Uniprot:P63080
Length = 473
Score = 312 (114.9 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 59/162 (36%), Positives = 95/162 (58%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 153 (58.9 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 160
Query: 299 MEYCLVNI 306
C++++
Sbjct: 161 ---CMMDL 165
Score = 74 (31.1 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+ FP F++ N YW+ +
Sbjct: 448 IDRWSRIVFPFTFSLFNLVYWLYY 471
Score = 57 (25.1 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAK-ENAR 335
FVF+AL+EY VN + P +Q K+ E AK +N R
Sbjct: 316 FVFLALLEYAFVNYIFFGRG------PQRQKKLAEKTAKAKNDR 353
>RGD|2651 [details] [associations]
symbol:Gabrb3 "gamma-aminobutyric acid (GABA) A receptor, beta 3"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA;TAS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0035612 "AP-2 adaptor complex binding" evidence=IPI] [GO:0043195
"terminal bouton" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0048666 "neuron development" evidence=ISO]
[GO:0051932 "synaptic transmission, GABAergic" evidence=IDA]
[GO:0060077 "inhibitory synapse" evidence=IDA] [GO:0060119 "inner ear
receptor cell development" evidence=ISO] [GO:0060384 "innervation"
evidence=ISO] [GO:0090102 "cochlea development" evidence=ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931
Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160
PROSITE:PS00236 RGD:2651 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043195
GO:GO:0034707 GO:GO:0005254 GO:GO:0051932 HOVERGEN:HBG051707
eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181 CTD:2562 EMBL:X15468
EMBL:L04310 IPI:IPI00327083 PIR:S04466 RefSeq:NP_058761.1
UniGene:Rn.208228 ProteinModelPortal:P63079 SMR:P63079 IntAct:P63079
STRING:P63079 PRIDE:P63079 GeneID:24922 KEGG:rno:24922 UCSC:RGD:2651
InParanoid:P63079 BindingDB:P63079 ChEMBL:CHEMBL316 NextBio:604867
ArrayExpress:P63079 Genevestigator:P63079
GermOnline:ENSRNOG00000014938 GO:GO:0060077 Uniprot:P63079
Length = 473
Score = 312 (114.9 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 59/162 (36%), Positives = 95/162 (58%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 153 (58.9 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 160
Query: 299 MEYCLVNI 306
C++++
Sbjct: 161 ---CMMDL 165
Score = 74 (31.1 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+ FP F++ N YW+ +
Sbjct: 448 IDRWSRIVFPFTFSLFNLVYWLYY 471
Score = 57 (25.1 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAK-ENAR 335
FVF+AL+EY VN + P +Q K+ E AK +N R
Sbjct: 316 FVFLALLEYAFVNYIFFGRG------PQRQKKLAEKTAKAKNDR 353
>UNIPROTKB|P19019 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181
OrthoDB:EOG45756F EMBL:X54243 IPI:IPI00591128 PIR:S11440
RefSeq:NP_990677.1 UniGene:Gga.747 ProteinModelPortal:P19019
SMR:P19019 GeneID:396290 KEGG:gga:396290 CTD:2562 InParanoid:P19019
NextBio:20816341 ArrayExpress:P19019 Uniprot:P19019
Length = 476
Score = 308 (113.5 bits), Expect = 2.3e-38, Sum P(3) = 2.3e-38
Identities = 59/162 (36%), Positives = 94/162 (58%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+ + + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 273
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 315
Score = 153 (58.9 bits), Expect = 5.0e-14, Sum P(3) = 5.0e-14
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 160
Query: 299 MEYCLVNI 306
C++++
Sbjct: 161 ---CMMDL 165
Score = 71 (30.1 bits), Expect = 2.3e-38, Sum P(3) = 2.3e-38
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+ FP F++ N YW+ +
Sbjct: 451 IDRWSRMVFPFTFSLFNLIYWLYY 474
Score = 65 (27.9 bits), Expect = 2.3e-38, Sum P(3) = 2.3e-38
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVF+AL+EY VN + K P+ +Q K+ E +AK N
Sbjct: 316 FVFLALLEYAFVNYIF----FGKGPQ--RQKKLAEKSAKAN 350
>ZFIN|ZDB-GENE-030131-8196 [details] [associations]
symbol:gabrb2 "gamma-aminobutyric acid (GABA) A
receptor, beta 2" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-030131-8196
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG051707 KO:K05181 CTD:2561 HSSP:P23415 EMBL:AJ302649
IPI:IPI00852026 RefSeq:NP_001019558.2 UniGene:Dr.132858
ProteinModelPortal:Q9DDD9 SMR:Q9DDD9 GeneID:336252 KEGG:dre:336252
InParanoid:Q9DDD9 NextBio:20811647 Uniprot:Q9DDD9
Length = 519
Score = 314 (115.6 bits), Expect = 2.7e-38, Sum P(3) = 2.7e-38
Identities = 61/162 (37%), Positives = 95/162 (58%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + ++ E+IELPQ +
Sbjct: 152 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDGAVSGVERIELPQFSI 211
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 212 VGYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 271
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 272 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 313
Score = 157 (60.3 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 44 KGYDIRLRPDFGGAPVAVRMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLN 103
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 104 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 158
Query: 299 MEYCLVNI 306
C++++
Sbjct: 159 ---CMMDL 163
Score = 75 (31.5 bits), Expect = 2.7e-38, Sum P(3) = 2.7e-38
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMF 388
+ID++SR+ FP LF+ N YW+ +
Sbjct: 493 SIDKWSRMIFPTLFSFFNIVYWLYY 517
Score = 60 (26.2 bits), Expect = 2.7e-38, Sum P(3) = 2.7e-38
Identities = 18/49 (36%), Positives = 22/49 (44%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARLLTGQP 341
FVF+AL+EY VN + P +Q K E AA N L P
Sbjct: 314 FVFLALLEYAFVNYIFFGRG------PQRQKKAAEKAATANNEKLRPDP 356
>MGI|MGI:95619 [details] [associations]
symbol:Gabrb1 "gamma-aminobutyric acid (GABA) A receptor,
subunit beta 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005253 "anion channel activity"
evidence=ISO] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0009636 "response to toxic
substance" evidence=ISO] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0043235
"receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050811 "GABA receptor binding" evidence=ISO]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 MGI:MGI:95619 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 CTD:2560 eggNOG:NOG77438 HOGENOM:HOG000231335
KO:K05181 OMA:YRKPMSS OrthoDB:EOG45756F EMBL:U14418 IPI:IPI00119283
PIR:S53530 RefSeq:NP_032095.1 UniGene:Mm.38567
ProteinModelPortal:P50571 SMR:P50571 STRING:P50571
PhosphoSite:P50571 PaxDb:P50571 PRIDE:P50571
Ensembl:ENSMUST00000031122 GeneID:14400 KEGG:mmu:14400
InParanoid:P50571 BindingDB:P50571 ChEMBL:CHEMBL2839 ChiTaRS:GABRB1
NextBio:285945 Bgee:P50571 Genevestigator:P50571
GermOnline:ENSMUSG00000029212 Uniprot:P50571
Length = 474
Score = 302 (111.4 bits), Expect = 3.0e-38, Sum P(3) = 3.0e-38
Identities = 60/162 (37%), Positives = 90/162 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 157 (60.3 bits), Expect = 4.0e-15, Sum P(3) = 4.0e-15
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 160
Query: 299 MEYCLVNI 306
C++++
Sbjct: 161 ---CMMDL 165
Score = 81 (33.6 bits), Expect = 3.0e-38, Sum P(3) = 3.0e-38
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMF 388
+ID++SR+FFP+ F++ N YW+ +
Sbjct: 448 SIDKWSRMFFPITFSLFNVVYWLYY 472
Score = 61 (26.5 bits), Expect = 3.0e-38, Sum P(3) = 3.0e-38
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARL 336
FVF+AL+EY VN + P+ +KQD+ +A E RL
Sbjct: 316 FVFLALLEYAFVNYIFFGKG-PQKKGASKQDQ----SANEKNRL 354
>UNIPROTKB|P18505 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0032570 "response to progesterone stimulus" evidence=IEA]
[GO:0042698 "ovulation cycle" evidence=IEA] [GO:0043235 "receptor
complex" evidence=IEA] [GO:0050811 "GABA receptor binding"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006810 "transport" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0005887 "integral to plasma
membrane" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005887 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 EMBL:CH471069 DrugBank:DB00683
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690 CTD:2560
eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05181 OMA:YRKPMSS
OrthoDB:EOG45756F EMBL:X14767 EMBL:M59216 EMBL:M59212 EMBL:M59214
EMBL:M59215 EMBL:AK312720 EMBL:BC022449 EMBL:S70733 IPI:IPI00299122
PIR:A40336 RefSeq:NP_000803.2 UniGene:Hs.27283
ProteinModelPortal:P18505 SMR:P18505 IntAct:P18505 STRING:P18505
PhosphoSite:P18505 DMDM:23831128 PaxDb:P18505 PRIDE:P18505
DNASU:2560 Ensembl:ENST00000295454 GeneID:2560 KEGG:hsa:2560
UCSC:uc003gxh.3 GeneCards:GC04P046949 H-InvDB:HIX0004191
H-InvDB:HIX0164000 HGNC:HGNC:4081 HPA:HPA051297 MIM:137190
neXtProt:NX_P18505 PharmGKB:PA28495 InParanoid:P18505
PhylomeDB:P18505 BindingDB:P18505 ChEMBL:CHEMBL4558 GenomeRNAi:2560
NextBio:10111 ArrayExpress:P18505 Bgee:P18505 CleanEx:HS_GABRB1
Genevestigator:P18505 Uniprot:P18505
Length = 474
Score = 302 (111.4 bits), Expect = 4.9e-38, Sum P(3) = 4.9e-38
Identities = 60/162 (37%), Positives = 90/162 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 157 (60.3 bits), Expect = 6.4e-15, Sum P(3) = 6.4e-15
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 160
Query: 299 MEYCLVNI 306
C++++
Sbjct: 161 ---CMMDL 165
Score = 81 (33.6 bits), Expect = 4.9e-38, Sum P(3) = 4.9e-38
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMF 388
+ID++SR+FFP+ F++ N YW+ +
Sbjct: 448 SIDKWSRMFFPITFSLFNVVYWLYY 472
Score = 59 (25.8 bits), Expect = 4.9e-38, Sum P(3) = 4.9e-38
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDK 324
FVF+AL+EY VN + P+ +KQD+
Sbjct: 316 FVFLALLEYAFVNYIFFGKG-PQKKGASKQDQ 346
>RGD|2649 [details] [associations]
symbol:Gabrb1 "gamma-aminobutyric acid (GABA) A receptor, beta 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005253 "anion channel activity"
evidence=IDA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=TAS] [GO:0009636 "response to toxic substance" evidence=IDA]
[GO:0015276 "ligand-gated ion channel activity" evidence=TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0021954 "central nervous
system neuron development" evidence=IEP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IDA] [GO:0032570
"response to progesterone stimulus" evidence=IEP] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042698 "ovulation
cycle" evidence=IEP] [GO:0043235 "receptor complex" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0050811 "GABA
receptor binding" evidence=IPI] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 RGD:2649 GO:GO:0005886
GO:GO:0005737 GO:GO:0005635 GO:GO:0016020 GO:GO:0009636 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0030425 GO:GO:0015276 GO:GO:0043235 GO:GO:0032570
GO:GO:0042698 GO:GO:0005253 GO:GO:0034707 GO:GO:0005254 GO:GO:0021954
GO:GO:0006821 HOVERGEN:HBG051707 CTD:2560 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
OMA:YRKPMSS OrthoDB:EOG45756F EMBL:X15466 IPI:IPI00209268 PIR:S04464
RefSeq:NP_037088.1 UniGene:Rn.207157 ProteinModelPortal:P15431
SMR:P15431 IntAct:P15431 TCDB:1.A.9.5.1 PhosphoSite:P15431
PRIDE:P15431 Ensembl:ENSRNOT00000003170 GeneID:25450 KEGG:rno:25450
UCSC:RGD:2649 InParanoid:P15431 BindingDB:P15431 ChEMBL:CHEMBL334
NextBio:606697 Genevestigator:P15431 GermOnline:ENSRNOG00000002327
Uniprot:P15431
Length = 474
Score = 302 (111.4 bits), Expect = 4.9e-38, Sum P(3) = 4.9e-38
Identities = 60/162 (37%), Positives = 90/162 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 157 (60.3 bits), Expect = 6.4e-15, Sum P(3) = 6.4e-15
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 160
Query: 299 MEYCLVNI 306
C++++
Sbjct: 161 ---CMMDL 165
Score = 81 (33.6 bits), Expect = 4.9e-38, Sum P(3) = 4.9e-38
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMF 388
+ID++SR+FFP+ F++ N YW+ +
Sbjct: 448 SIDKWSRMFFPITFSLFNVVYWLYY 472
Score = 59 (25.8 bits), Expect = 4.9e-38, Sum P(3) = 4.9e-38
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDK 324
FVF+AL+EY VN + P+ +KQD+
Sbjct: 316 FVFLALLEYAFVNYIFFGKG-PQKKGASKQDQ 346
>UNIPROTKB|P08220 [details] [associations]
symbol:GABRB1 "Gamma-aminobutyric acid receptor subunit
beta-1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 EMBL:X05718 IPI:IPI00718227 PIR:B27142
RefSeq:NP_776969.1 UniGene:Bt.173 ProteinModelPortal:P08220
SMR:P08220 PRIDE:P08220 Ensembl:ENSBTAT00000023711 GeneID:282239
KEGG:bta:282239 CTD:2560 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 InParanoid:P08220
KO:K05181 OMA:YRKPMSS OrthoDB:EOG45756F BindingDB:P08220
ChEMBL:CHEMBL2848 NextBio:20806058 Uniprot:P08220
Length = 474
Score = 302 (111.4 bits), Expect = 6.2e-38, Sum P(3) = 6.2e-38
Identities = 60/162 (37%), Positives = 90/162 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W+ E + KIELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K ++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 214 VDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASA 273
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + +LP + Y+KA+D ++ C V
Sbjct: 274 ARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFV 315
Score = 157 (60.3 bits), Expect = 8.1e-15, Sum P(3) = 8.1e-15
Identities = 38/128 (29%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q+WKD RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 160
Query: 299 MEYCLVNI 306
C++++
Sbjct: 161 ---CMMDL 165
Score = 81 (33.6 bits), Expect = 6.2e-38, Sum P(3) = 6.2e-38
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMF 388
+ID++SR+FFP+ F++ N YW+ +
Sbjct: 448 SIDKWSRMFFPITFSLFNVVYWLYY 472
Score = 58 (25.5 bits), Expect = 6.2e-38, Sum P(3) = 6.2e-38
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDK 324
FVF+AL+EY VN + P+ KQD+
Sbjct: 316 FVFLALLEYAFVNYIFFGKG-PQKKGAGKQDQ 346
>ZFIN|ZDB-GENE-101102-2 [details] [associations]
symbol:gabrb3 "gamma-aminobutyric acid (GABA) A
receptor, beta 3" species:7955 "Danio rerio" [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-101102-2 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
EMBL:BX927286 EMBL:CR405707 IPI:IPI00898271
Ensembl:ENSDART00000087300 Uniprot:E7EXG0
Length = 532
Score = 312 (114.9 bits), Expect = 9.0e-38, Sum P(3) = 9.0e-38
Identities = 61/162 (37%), Positives = 92/162 (56%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W E + +IELPQ +
Sbjct: 188 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGETAVTGVSRIELPQFSI 247
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 248 VDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 307
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 308 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 349
Score = 152 (58.6 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V + V +D + E +M Y ++F Q W+D RL +P N
Sbjct: 80 KGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYTGIPLN 139
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 140 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 194
Query: 299 MEYCLVNI 306
C++++
Sbjct: 195 ---CMMDL 199
Score = 77 (32.2 bits), Expect = 9.0e-38, Sum P(3) = 9.0e-38
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+ FP +F++ N YW+ +
Sbjct: 507 IDRWSRIIFPAVFSLFNLIYWLYY 530
Score = 57 (25.1 bits), Expect = 9.0e-38, Sum P(3) = 9.0e-38
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVF+AL+EY VN + P Q K+ E A K N
Sbjct: 350 FVFLALLEYAFVNYIFFGRG------PQMQKKLAEKAEKAN 384
>ZFIN|ZDB-GENE-040801-106 [details] [associations]
symbol:glrbb "glycine receptor, beta b"
species:7955 "Danio rerio" [GO:0016934 "extracellular-glycine-gated
chloride channel activity" evidence=IEA;IMP] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IMP]
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008060 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR01677 PROSITE:PS00236
ZFIN:ZDB-GENE-040801-106 GO:GO:0016021 GO:GO:0034613 GO:GO:0045211
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0016934 HOVERGEN:HBG051707
GeneTree:ENSGT00550000074453 HOGENOM:HOG000231336 eggNOG:NOG295166
KO:K05196 OrthoDB:EOG4HMJ97 PANTHER:PTHR18945:SF29 EMBL:CR456621
EMBL:BC078269 EMBL:AB195560 IPI:IPI00486645 RefSeq:NP_001003587.1
UniGene:Dr.83354 SMR:Q6DC22 STRING:Q6DC22
Ensembl:ENSDART00000074685 GeneID:445193 KEGG:dre:445193 CTD:445193
InParanoid:Q6DC22 OMA:QHARITE NextBio:20831954 Uniprot:Q6DC22
Length = 494
Score = 364 (133.2 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 72/190 (37%), Positives = 112/190 (58%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RL++ LSC ++ ++P DTQ C +Q+ES +TTDDL F W P+ +DE I LPQ +
Sbjct: 175 RLSVTLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLQFMWQSGDPVQMDE-IALPQFDIK 233
Query: 66 KN--KTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ + +C++ Y+ TG +TC+EVIF L+R++G+Y+ Y PT LIV++SW+SFWI P+A
Sbjct: 234 QEDIEYGNCTKYYAGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA 293
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV----SSTSLTFNDILP 178
+ AR + + LP VSY+KA+D ++ AC + S ++
Sbjct: 294 SAARVPLGILSVLSLSSECTSLASELPKVSYVKAIDIWLIACLLFGFASLVEYAVVQVML 353
Query: 179 EDPKLYDKMR 188
PKL + R
Sbjct: 354 NSPKLLEAER 363
Score = 172 (65.6 bits), Expect = 7.1e-13, Sum P(3) = 7.1e-13
Identities = 43/142 (30%), Positives = 73/142 (51%)
Query: 152 SYLKAVDAFMSACTVSSTSLTFNDIL-PEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDS 210
S L + D ++ +STS N +L DP++ RP K G P ++ + S
Sbjct: 41 SQLSSED--LARVPANSTSNILNKLLITYDPRI----RPNFK-GIPVEDRVNIFINSFGS 93
Query: 211 IDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQ 270
I E +M Y +IF Q W D RLRLP++ S+ ++ K +W+PD FF N K+ F
Sbjct: 94 IQETTMDYRVNIFLRQRWNDPRLRLPQDFKSDSLTVDPKMFKCLWKPDLFFANEKSANFH 153
Query: 271 TMTIPNHYVWLYKDKTILYMVK 292
+T N ++++++ +L ++
Sbjct: 154 DVTQENILLFIFRNGDVLISMR 175
Score = 56 (24.8 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID ++R FP F N YW ++
Sbjct: 470 IDLYARALFPFSFLFFNVIYWSVY 493
Score = 47 (21.6 bits), Expect = 7.1e-13, Sum P(3) = 7.1e-13
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 284 DKTILYMVKFVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENA 334
D ++ + F F +L+EY +V ++L PK E A++ KI A KE A
Sbjct: 329 DIWLIACLLFGFASLVEYAVVQVMLNS---PKLLE-AERAKI---ATKEKA 372
>UNIPROTKB|F5H7N0 [details] [associations]
symbol:GABRB3 "Gamma-aminobutyric acid receptor subunit
beta-3" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HGNC:HGNC:4083 ChiTaRS:GABRB3
EMBL:AC009878 EMBL:AC011196 EMBL:AC104569 EMBL:AC127511
EMBL:AC135999 EMBL:AC145167 EMBL:AC145196 EMBL:EU606048
IPI:IPI00470817 ProteinModelPortal:F5H7N0 SMR:F5H7N0
Ensembl:ENST00000541819 UCSC:uc001zbb.3 OMA:FYAIYET
ArrayExpress:F5H7N0 Bgee:F5H7N0 Uniprot:F5H7N0
Length = 529
Score = 312 (114.9 bits), Expect = 1.7e-37, Sum P(3) = 1.7e-37
Identities = 59/162 (36%), Positives = 95/162 (58%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 210 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 269
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+++ + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 270 VEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 329
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 330 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 371
Score = 153 (58.9 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 102 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLN 161
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 162 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 216
Query: 299 MEYCLVNI 306
C++++
Sbjct: 217 ---CMMDL 221
Score = 74 (31.1 bits), Expect = 1.7e-37, Sum P(3) = 1.7e-37
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+ FP F++ N YW+ +
Sbjct: 504 IDRWSRIVFPFTFSLFNLVYWLYY 527
Score = 57 (25.1 bits), Expect = 1.7e-37, Sum P(3) = 1.7e-37
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAK-ENAR 335
FVF+AL+EY VN + P +Q K+ E AK +N R
Sbjct: 372 FVFLALLEYAFVNYIFFGRG------PQRQKKLAEKTAKAKNDR 409
>UNIPROTKB|F1NES7 [details] [associations]
symbol:LOC100858201 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0060119 "inner ear receptor cell development"
evidence=IEA] [GO:0060384 "innervation" evidence=IEA] [GO:0090102
"cochlea development" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 IPI:IPI00591128 OMA:FYAIYET
EMBL:AADN02017665 EMBL:AADN02017666 EMBL:AADN02017667
EMBL:AADN02017668 EMBL:AC145944 ProteinModelPortal:F1NES7
Ensembl:ENSGALT00000027029 ArrayExpress:F1NES7 Uniprot:F1NES7
Length = 478
Score = 299 (110.3 bits), Expect = 3.7e-37, Sum P(3) = 3.7e-37
Identities = 59/164 (35%), Positives = 94/164 (57%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + E+IELPQ +
Sbjct: 154 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVERIELPQFSI 213
Query: 65 VKNKTADCSQVYSTGN--FTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
V+ + + V++TG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A
Sbjct: 214 VEYRLVSKNVVFATGKCAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDA 273
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
+ AR + + +LP + Y+KA+D ++ C V
Sbjct: 274 SAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 317
Score = 153 (58.9 bits), Expect = 5.1e-14, Sum P(3) = 5.1e-14
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 46 KGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLN 105
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 106 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 160
Query: 299 MEYCLVNI 306
C++++
Sbjct: 161 ---CMMDL 165
Score = 71 (30.1 bits), Expect = 3.7e-37, Sum P(3) = 3.7e-37
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+ FP F++ N YW+ +
Sbjct: 453 IDRWSRMVFPFTFSLFNLIYWLYY 476
Score = 65 (27.9 bits), Expect = 3.7e-37, Sum P(3) = 3.7e-37
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVF+AL+EY VN + K P+ +Q K+ E +AK N
Sbjct: 318 FVFLALLEYAFVNYIF----FGKGPQ--RQKKLAEKSAKAN 352
>WB|WBGene00001591 [details] [associations]
symbol:glc-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0031987 "locomotion
involved in locomotory behavior" evidence=IGI;IMP]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0031987
GeneTree:ENSGT00630000089685 KO:K05273 EMBL:Z92830 EMBL:U14524
PIR:S50864 PIR:T20754 RefSeq:NP_507090.1 UniGene:Cel.18023
ProteinModelPortal:G5EBR3 SMR:G5EBR3 EnsemblMetazoa:F11A5.10
GeneID:180086 KEGG:cel:CELE_F11A5.10 CTD:180086 WormBase:F11A5.10
OMA:DEINMEY ChEMBL:CHEMBL4410 NextBio:908030 Uniprot:G5EBR3
Length = 461
Score = 341 (125.1 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 64/161 (39%), Positives = 89/161 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M YP D Q+CS+ + S ++TT D+ + W PL + + LP Q
Sbjct: 184 RISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQ 243
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ V +TG ++CL LKR +YL YIP+C++VI+SWVSFW A
Sbjct: 244 LTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAI 303
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR Q A + LPPVSY+KA+D ++ AC
Sbjct: 304 PARVTLGVTTLLTMTAQSAGINSQLPPVSYIKAIDVWIGAC 344
Score = 149 (57.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 34/112 (30%), Positives = 59/112 (52%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR--LPENMT 240
YD ++RPP G P +V ++ + + ID +M Y+A + ++W D RL + +
Sbjct: 75 YDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESWIDKRLSYGVKGDGQ 134
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
++ +L V +W PD+FF N K T+ PN + ++ D T+LY V+
Sbjct: 135 PDFVILTVG--HQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVR 184
Score = 71 (30.1 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFAE 390
+D SR FPVLF + N YW F +
Sbjct: 431 VDLISRALFPVLFFVFNILYWSRFGQ 456
>UNIPROTKB|P24045 [details] [associations]
symbol:GABRB4 "Gamma-aminobutyric acid receptor subunit
beta-4" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231335 EMBL:X56647 EMBL:X56648 EMBL:X56646
IPI:IPI00571160 IPI:IPI00596309 PIR:JH0359 RefSeq:NP_001161175.1
RefSeq:NP_001161176.1 UniGene:Gga.428 ProteinModelPortal:P24045
SMR:P24045 PRIDE:P24045 Ensembl:ENSGALT00000011746 GeneID:396288
KEGG:gga:396288 CTD:55879 InParanoid:P24045 OMA:ANNERHR
OrthoDB:EOG40S0FS NextBio:20816339 Uniprot:P24045
Length = 488
Score = 304 (112.1 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 55/162 (33%), Positives = 93/162 (57%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +T DD++F W + + E +ELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDQQNCTLEIESYGYTVDDIVFFWQGNDSAVTGMEVLELPQFTI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
++ + V++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 IEQRLVSREVVFTTGSYLRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 314
Score = 168 (64.2 bits), Expect = 7.5e-15, Sum P(3) = 7.5e-15
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 154 LKAVDAFMSACTVSSTSLTFNDILPE--DPKL--YDKMRPPKKEGQPTIVYFHVTVMGLD 209
+ A+ A AC S S ++ E D L YD P G P V + + +D
Sbjct: 13 VSALAALCVACCAQSPSTGNISVVKEIVDKLLKGYDVRLRPDFGGNPVTVGMSIHISSID 72
Query: 210 SIDENSMTYAADIFFAQTWKDHRLR---LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKA 266
I E +M Y ++F Q+W+D RL LP N+T + R+ + +W PD++F N K
Sbjct: 73 QISEVNMDYTITMYFQQSWRDKRLAYNDLPLNLTLDNRVAD-----QLWLPDTYFLNDKK 127
Query: 267 VTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNI 306
+T+ N + L+ D T+LY ++ A C++++
Sbjct: 128 SFLHGVTVKNRMIRLHPDGTVLYGLRITTTAA---CMMDL 164
Score = 73 (30.8 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID++SR+ FP+ F N YW+ +
Sbjct: 463 IDKWSRIIFPITFGFFNLVYWLYY 486
Score = 54 (24.1 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENAR 335
FVF+AL+EY VN + P + KQ + A E R
Sbjct: 315 FVFLALLEYAFVNYIFFGRG---PRQQKKQSERISKANNERHR 354
>FB|FBgn0010240 [details] [associations]
symbol:Lcch3 "Ligand-gated chloride channel homolog 3"
species:7227 "Drosophila melanogaster" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0004890 "GABA-A receptor activity"
evidence=NAS;IDA] [GO:0016021 "integral to membrane"
evidence=IEA;NAS] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:AE014298 GO:GO:0034707 GO:GO:0005254
eggNOG:NOG77438 GeneTree:ENSGT00630000089685 KO:K05181 EMBL:L17436
EMBL:S62717 EMBL:AY060660 PIR:JN0603 RefSeq:NP_996469.1
UniGene:Dm.6661 ProteinModelPortal:Q08832 SMR:Q08832 STRING:Q08832
EnsemblMetazoa:FBtr0074129 GeneID:32554 KEGG:dme:Dmel_CG17336
CTD:32554 FlyBase:FBgn0010240 InParanoid:Q08832 OMA:ERSETCS
OrthoDB:EOG444J1S PhylomeDB:Q08832 ChiTaRS:Lcch3 GenomeRNAi:32554
NextBio:779108 Bgee:Q08832 GermOnline:CG17336 Uniprot:Q08832
Length = 496
Score = 313 (115.2 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 61/166 (36%), Positives = 95/166 (57%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELP 60
+T R T L+C M+ YP D+Q C++++ES +T D++ W P P+ E ELP
Sbjct: 164 VTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPT-PVRGVEDAELP 222
Query: 61 QLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
Q ++ +T D + +TG + L + F L+R +GY++F TY+P+ LIV++SWVSFWI
Sbjct: 223 QFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINH 282
Query: 121 EAAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
EA AR ++SLP +SY+KA+D ++ C V
Sbjct: 283 EATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFV 328
Score = 123 (48.4 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 36/120 (30%), Positives = 53/120 (44%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRL-------- 235
YD P G+P V +T+ D+I E +M Y ++ Q W+D RL
Sbjct: 51 YDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFNIFGQYFD 110
Query: 236 PENMT--SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKF 293
EN S+ L D+ + +W PD+FF N K +T N V L D + Y ++F
Sbjct: 111 DENDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGGDGAVTYGMRF 170
Score = 69 (29.3 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID++SR+ FP+ F N YW+ +
Sbjct: 470 IDKYSRMIFPISFLAFNLGYWLFY 493
Score = 47 (21.6 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 288 LYMVK---FVFMALMEYCLVN 305
+Y+V FVF AL+EY VN
Sbjct: 321 IYLVMCFVFVFAALLEYAAVN 341
Score = 38 (18.4 bits), Expect = 9.1e-30, Sum P(2) = 9.1e-30
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 368 FSRVFFPVL-FAILNCTYW 385
F VF +L +A +N TYW
Sbjct: 327 FVFVFAALLEYAAVNYTYW 345
>ZFIN|ZDB-GENE-070424-211 [details] [associations]
symbol:si:dkey-169l5.3 "si:dkey-169l5.3"
species:7955 "Danio rerio" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
ZFIN:ZDB-GENE-070424-211 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685 EMBL:CABZ01006845
EMBL:CABZ01006846 EMBL:CABZ01006847 EMBL:CABZ01006848
EMBL:CABZ01006849 EMBL:CABZ01006850 EMBL:CABZ01006851
EMBL:CABZ01006852 EMBL:CABZ01006853 EMBL:CABZ01006854
EMBL:CABZ01006855 EMBL:CR932985 IPI:IPI00934600
Ensembl:ENSDART00000064718 Uniprot:F1Q4Y6
Length = 512
Score = 304 (112.1 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 56/162 (34%), Positives = 94/162 (58%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD++F W + + +K+ELPQ +
Sbjct: 155 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDNAVTGVDKLELPQFSI 214
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V+ + ++TG++ L + F +KR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 215 VELRLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVSFWINYDASA 274
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 275 ARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFV 316
Score = 168 (64.2 bits), Expect = 9.7e-15, Sum P(3) = 9.7e-15
Identities = 46/162 (28%), Positives = 79/162 (48%)
Query: 151 VSYLKAVD--AFMSACTVSSTSLTF-NDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMG 207
VS L A+ F + + ST ++ + + K YD P G P IV + +
Sbjct: 13 VSALAALSFVCFAQSSSTGSTGISVAKTTVDKLLKGYDIRLRPDFGGPPVIVGMSINIAS 72
Query: 208 LDSIDENSMTYAADIFFAQTWKDHRLRLPE---NMTSEYRLLEVDWLKNMWRPDSFFKNA 264
+DSI E +M Y ++F Q+W+D RL E N+T + R+ + +W PD++F N
Sbjct: 73 IDSISEVNMDYTITMYFQQSWRDKRLAYAEMALNLTLDNRVAD-----QLWLPDTYFLND 127
Query: 265 KAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNI 306
K +T+ N + L+ D T+LY ++ A C++++
Sbjct: 128 KKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAA---CMMDL 166
Score = 72 (30.4 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID++SR+ FP+ F N YW+ +
Sbjct: 487 IDKWSRIIFPITFGFFNLIYWLYY 510
Score = 55 (24.4 bits), Expect = 2.5e-36, Sum P(3) = 2.5e-36
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVF+AL+EY VN V P +Q KI E K N
Sbjct: 317 FVFLALLEYAFVNYVFFGRG------PQQQKKINERLNKAN 351
>WB|WBGene00000233 [details] [associations]
symbol:avr-15 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0043051 "regulation of
pharyngeal pumping" evidence=IGI;IMP] [GO:0001508 "regulation of
action potential" evidence=IMP] [GO:0031987 "locomotion involved in
locomotory behavior" evidence=IGI;IMP] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0043051 GO:GO:0001508 GO:GO:0031987
GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273 EMBL:Z77668
EMBL:Z81118 CTD:179834 RefSeq:NP_001024076.1
ProteinModelPortal:G5ECH3 SMR:G5ECH3 PRIDE:G5ECH3
EnsemblMetazoa:R11G10.1a GeneID:179834 KEGG:cel:CELE_R11G10.1
WormBase:R11G10.1a OMA:NISYWTH NextBio:907054 Uniprot:G5ECH3
Length = 657
Score = 348 (127.6 bits), Expect = 4.5e-36, Sum P(2) = 4.5e-36
Identities = 63/161 (39%), Positives = 93/161 (57%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R++L LSC M+ YP D Q+C + + S ++TT D+ + W E P+ + + LP Q
Sbjct: 376 RISLVLSCPMHLQYYPMDVQQCFIDLASYAYTTKDIEYVWKEETPVQLKAGLSSSLPSFQ 435
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG+++CL I L+R+ YYL YIP+C++VI+SWVSFWI A
Sbjct: 436 LTNTSTTYCTSKTNTGSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAV 495
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR Q + A LPPV+Y+KA+D ++ AC
Sbjct: 496 PARVTLGVTTLLTMTTQSSGINAKLPPVAYIKAIDVWIGAC 536
Score = 153 (58.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 35/114 (30%), Positives = 60/114 (52%)
Query: 184 YD-KMRPPKKEGQ----PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN 238
YD ++RPP ++G P +V ++ + + ID +M Y+ + F ++W D RL
Sbjct: 263 YDHRVRPPGEDGTIHGGPVVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSFGVK 322
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
++ L + + +W PDSFF+N K + PN + ++KD TILY V+
Sbjct: 323 GDAQPDFLILTAGQEIWMPDSFFQNEKQAYKHMIDKPNVLIRVHKDGTILYSVR 376
Score = 71 (30.1 bits), Expect = 4.5e-36, Sum P(2) = 4.5e-36
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 366 DRFSRVFFPVLFAILNCTYWIMFAEF 391
D SRV FPVLF N +YW + ++
Sbjct: 626 DLISRVMFPVLFLTFNISYWTHYGQY 651
>WB|WBGene00001512 [details] [associations]
symbol:gab-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0004890 "GABA-A
receptor activity" evidence=IEA;IDA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA;IDA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=ISS] [GO:0045202 "synapse" evidence=IC] InterPro:IPR002289
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236
GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0045202
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG77438
GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335 KO:K05181
EMBL:AF498370 EMBL:Z93397 PIR:T27614 RefSeq:NP_499661.2 HSSP:P23415
ProteinModelPortal:O18276 SMR:O18276 PaxDb:O18276
EnsemblMetazoa:ZC482.1 GeneID:176691 KEGG:cel:CELE_ZC482.1
UCSC:ZC482.1 CTD:176691 WormBase:ZC482.1 InParanoid:O18276
OMA:HEVTERN NextBio:893616 Uniprot:O18276
Length = 550
Score = 310 (114.2 bits), Expect = 6.8e-36, Sum P(3) = 6.8e-36
Identities = 61/163 (37%), Positives = 97/163 (59%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD--EKIELPQLQ 63
RLT LSC+MN +P D+Q C++++ES +TT +++ +W+ PLAV E+ ++PQ
Sbjct: 173 RLTSTLSCSMNLRNFPLDSQNCTVEIESYGYTTSEVLMKWN--YPLAVHGVEQADVPQFT 230
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T D +TG++ L ++F L+R +GY++F TY+P LIV++SWVSFWI EA
Sbjct: 231 ITGFHTEDSIVSTATGSYQRLSLVFQLRRSVGYFIFQTYLPCVLIVMLSWVSFWINHEAT 290
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + SLP +SY+K++D ++ C V
Sbjct: 291 SARVALGITTVLTMTTISTGVRQSLPRISYVKSIDIYLVMCFV 333
Score = 121 (47.7 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 32/123 (26%), Positives = 53/123 (43%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
S+ S +D+L + YD P G ++ + + DSI E M Y ++ Q
Sbjct: 52 SNASSLLSDLLLD----YDIRLRPGFGGDALLLTMDIIIASFDSISEVDMDYTLTMYLHQ 107
Query: 227 TWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKT 286
W D RLR + + L ++ +N+W PD+F N K +T N + + D
Sbjct: 108 YWTDERLRWSNEIPIDEMTLSGEFSQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGK 167
Query: 287 ILY 289
+ Y
Sbjct: 168 VAY 170
Score = 72 (30.4 bits), Expect = 6.8e-36, Sum P(3) = 6.8e-36
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 365 IDRFSRVFFPVLFAILNCTYW 385
ID++SRV FPV F + N YW
Sbjct: 522 IDKYSRVVFPVCFIVFNLFYW 542
Score = 48 (22.0 bits), Expect = 6.8e-36, Sum P(3) = 6.8e-36
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 285 KTI-LYMVK---FVFMALMEYCLVN 305
K+I +Y+V FVF AL+EY VN
Sbjct: 322 KSIDIYLVMCFVFVFAALLEYAAVN 346
>WB|WBGene00001592 [details] [associations]
symbol:glc-2 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0005886
GO:GO:0009792 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
GeneTree:ENSGT00630000089685 HSSP:P23415 eggNOG:NOG265706
HOGENOM:HOG000231336 EMBL:U14525 EMBL:FO080262 PIR:S50865
RefSeq:NP_491470.1 UniGene:Cel.19753 ProteinModelPortal:Q17328
SMR:Q17328 DIP:DIP-27494N MINT:MINT-1047253 PaxDb:Q17328
EnsemblMetazoa:F25F8.2 GeneID:172103 KEGG:cel:CELE_F25F8.2
UCSC:F25F8.2 CTD:172103 WormBase:F25F8.2 InParanoid:Q17328
KO:K05273 OMA:NIMIRML BindingDB:Q17328 ChEMBL:CHEMBL5527
DrugBank:DB00602 NextBio:874023 Uniprot:Q17328
Length = 434
Score = 323 (118.8 bits), Expect = 9.4e-36, Sum P(3) = 9.4e-36
Identities = 61/163 (37%), Positives = 92/163 (56%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI--ELPQLQ 63
R++L SC M +YP D Q C+ + S +HT +D++++WDP P+ + + +LP
Sbjct: 154 RISLTSSCPMRLQLYPLDYQSCNFDLVSYAHTMNDIMYEWDPSTPVQLKPGVGSDLPNF- 212
Query: 64 LVKNKT--ADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
++KN T ADC+ +TG++ CL + + KR+ YYL Y PT +IVI+SWVSFWI
Sbjct: 213 ILKNYTTNADCTSHTNTGSYGCLRMQLLFKRQFSYYLVQLYAPTTMIVIVSWVSFWIDLH 272
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ R + A LPPVSY+K VD ++ AC
Sbjct: 273 STAGRVALGVTTLLTMTTMQSAINAKLPPVSYVKVVDVWLGAC 315
Score = 117 (46.2 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 37/116 (31%), Positives = 57/116 (49%)
Query: 182 KLYD-KMRPP----KKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP 236
K YD ++RPP EG V ++ + L ID +M Y+ + F + W D RL
Sbjct: 38 KNYDMRVRPPPANSSTEGAVN-VRVNIMIRMLSKIDVVNMEYSIQLTFREQWIDPRLAY- 95
Query: 237 ENMT--SEYRLLEVDWLK-NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
EN+ + L V +K ++W PD+FF KA + + N ++ +Y D ILY
Sbjct: 96 ENLGFYNPPAFLTVPHVKKSLWIPDTFFPTEKAAHRHLIDMENMFLRIYPDGKILY 151
Score = 49 (22.3 bits), Expect = 9.4e-36, Sum P(3) = 9.4e-36
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 365 IDRFSRVFFPVLFAILNCTYWI 386
ID ++R P+ F N YW+
Sbjct: 397 IDFYARFVVPLAFLAFNVIYWV 418
Score = 40 (19.1 bits), Expect = 9.4e-36, Sum P(3) = 9.4e-36
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+EY V+
Sbjct: 318 FVFGALLEYAFVS 330
>UNIPROTKB|F1PKC7 [details] [associations]
symbol:GABRB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02932 PRINTS:PR00253
PRINTS:PR01160 GO:GO:0016021 GO:GO:0005886 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
EMBL:AAEX03003043 EMBL:AAEX03003044 EMBL:AAEX03003045
Ensembl:ENSCAFT00000027322 Uniprot:F1PKC7
Length = 314
Score = 257 (95.5 bits), Expect = 3.1e-35, Sum P(3) = 3.1e-35
Identities = 54/149 (36%), Positives = 83/149 (55%)
Query: 20 YPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQLVKNKTADCSQVYS 77
Y + ++ S Q+++ +TTDD+ F W D V KIELPQ +V K V+S
Sbjct: 7 YLLEARDRSSQIKNNGYTTDDIEFYWRGDDNAVTGVT-KIELPQFSIVDYKLITKKVVFS 65
Query: 78 TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARXXXXXXXXXXX 137
TG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+ AR
Sbjct: 66 TGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTM 125
Query: 138 XXQHAKSQASLPPVSYLKAVDAFMSACTV 166
+ + +LP + Y+KA+D ++ C V
Sbjct: 126 TTINTHLRETLPKIPYVKAIDMYLMGCFV 154
Score = 86 (35.3 bits), Expect = 3.1e-35, Sum P(3) = 3.1e-35
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+FFPV+F+ N YW+ +
Sbjct: 289 IDRWSRIFFPVVFSFFNIVYWLYY 312
Score = 64 (27.6 bits), Expect = 3.1e-35, Sum P(3) = 3.1e-35
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVFMAL+EY LVN + P +Q K E AA N
Sbjct: 155 FVFMALLEYALVNYIFFGRG------PQRQKKAAEKAASAN 189
>UNIPROTKB|F1RR58 [details] [associations]
symbol:GABRB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0007605 "sensory perception of
sound" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02932 PRINTS:PR00253
PRINTS:PR01160 GO:GO:0016021 GO:GO:0005886 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007605 GO:GO:0090102
GO:GO:0060119 GO:GO:0060384 GeneTree:ENSGT00630000089685
EMBL:CU469233 Ensembl:ENSSSCT00000018541 OMA:DAANIQY Uniprot:F1RR58
Length = 314
Score = 255 (94.8 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 54/148 (36%), Positives = 81/148 (54%)
Query: 21 PHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQLVKNKTADCSQVYST 78
P +Q+ ++ S +TTDD+ F W D V KIELPQ +V K V+ST
Sbjct: 8 PLFSQDILQELRSDGYTTDDIEFYWRGDDNAVTGVT-KIELPQFSIVDYKLITKKVVFST 66
Query: 79 GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARXXXXXXXXXXXX 138
G++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+ AR
Sbjct: 67 GSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMT 126
Query: 139 XQHAKSQASLPPVSYLKAVDAFMSACTV 166
+ + +LP + Y+KA+D ++ C V
Sbjct: 127 TINTHLRETLPKIPYVKAIDMYLMGCFV 154
Score = 86 (35.3 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR+SR+FFPV+F+ N YW+ +
Sbjct: 289 IDRWSRIFFPVVFSFFNIVYWLYY 312
Score = 64 (27.6 bits), Expect = 5.0e-35, Sum P(3) = 5.0e-35
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVFMAL+EY LVN + P +Q K E AA N
Sbjct: 155 FVFMALLEYALVNYIFFGRG------PQRQKKAAEKAASAN 189
>WB|WBGene00000232 [details] [associations]
symbol:avr-14 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0042493
"response to drug" evidence=IGI] [GO:0031987 "locomotion involved
in locomotory behavior" evidence=IGI;IMP] [GO:0043051 "regulation
of pharyngeal pumping" evidence=IGI;IMP] [GO:0008144 "drug binding"
evidence=IGI] [GO:0008068 "extracellular-glutamate-gated chloride
channel activity" evidence=IDA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0016020 GO:GO:0042493 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043051 EMBL:FO080115
GO:GO:0031987 GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273
GO:GO:0008068 GeneID:172270 KEGG:cel:CELE_B0207.12 UCSC:B0207.12a
CTD:172270 NextBio:874763 RefSeq:NP_001020963.1
ProteinModelPortal:Q95Q97 SMR:Q95Q97 PRIDE:Q95Q97
EnsemblMetazoa:B0207.12b WormBase:B0207.12b InParanoid:Q95Q97
ArrayExpress:Q95Q97 Uniprot:Q95Q97
Length = 430
Score = 316 (116.3 bits), Expect = 1.7e-34, Sum P(3) = 1.7e-34
Identities = 58/161 (36%), Positives = 90/161 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
RL+L LSC M+ YP D Q C + + S ++TT D+ ++W + P+ + + LP +
Sbjct: 163 RLSLVLSCPMSLEFYPLDRQNCLIDLASYAYTTQDIKYEWKEKKPIQQKDGLRQSLPSFE 222
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ + +TG ++C V+ L+R YYL YIP ++V++SWVSFW+ +A
Sbjct: 223 LQDVVTDYCTSLTNTGEYSCARVVLRLRREYSYYLIQLYIPCIMLVVVSWVSFWLDKDAV 282
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR Q + + LPPVSY+KAVD ++ C
Sbjct: 283 PARVSLGVTTLLTMTTQASGINSKLPPVSYIKAVDVWIGVC 323
Score = 126 (49.4 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 32/109 (29%), Positives = 55/109 (50%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPENMTSE---YRLL- 246
G P +V ++ + + ID+ +M Y+A F + W D RL R E+ +E + +L
Sbjct: 55 GGPVLVTVNIYLRSISKIDDVNMEYSAQFTFREEWTDQRLAYERYEESGDTEVPPFVVLA 114
Query: 247 ---EVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
D + +W PD+FF+N K + PN + ++K+ ILY V+
Sbjct: 115 TSENADQSQQIWMPDTFFQNEKEARRHLIDKPNVLIRIHKNGQILYSVR 163
Score = 45 (20.9 bits), Expect = 1.7e-34, Sum P(3) = 1.7e-34
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
F+F AL+EY +VN
Sbjct: 326 FIFGALLEYAVVN 338
Score = 39 (18.8 bits), Expect = 1.7e-34, Sum P(3) = 1.7e-34
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFAE 390
+D SR+ FP+ F Y++ + +
Sbjct: 401 VDLMSRLTFPLTFFSFLIFYYVAYVK 426
>UNIPROTKB|E2R4R7 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01670 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
EMBL:AAEX03008512 EMBL:AAEX03008511 Ensembl:ENSCAFT00000004969
OMA:RWTGTVE Uniprot:E2R4R7
Length = 364
Score = 285 (105.4 bits), Expect = 2.1e-34, Sum P(3) = 2.1e-34
Identities = 61/158 (38%), Positives = 88/158 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 76 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 135
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 136 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 195
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 196 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 233
Score = 92 (37.4 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 24/87 (27%), Positives = 41/87 (47%)
Query: 216 MTYAADIFFAQTWKDHRLRLP----ENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQT 271
M + ++ WKD RL P ++MT + RL+ K +W PD FF ++K
Sbjct: 1 MDFTMTLYLRHYWKDERLAFPSTSNKSMTFDGRLV-----KKIWVPDVFFVHSKRSFTHD 55
Query: 272 MTIPNHYVWLYKDKTILYMVKFVFMAL 298
T N + ++ D +LY ++ A+
Sbjct: 56 TTTDNIMLRVFPDGHVLYSMRITVTAM 82
Score = 71 (30.1 bits), Expect = 2.1e-34, Sum P(3) = 2.1e-34
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + + N YW +F+
Sbjct: 340 IDKYSRIIFPAAYILFNLIYWSIFS 364
Score = 43 (20.2 bits), Expect = 2.1e-34, Sum P(3) = 2.1e-34
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 239 FVFLSVLEYAAVN 251
>UNIPROTKB|F1MBQ3 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008057 InterPro:IPR008059 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
IPI:IPI00694785 EMBL:DAAA02026443 Ensembl:ENSBTAT00000024526
Uniprot:F1MBQ3
Length = 392
Score = 285 (105.4 bits), Expect = 3.4e-34, Sum P(3) = 3.4e-34
Identities = 61/158 (38%), Positives = 88/158 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 98 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 157
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 158 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 217
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 218 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 255
Score = 121 (47.7 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 34/108 (31%), Positives = 51/108 (47%)
Query: 196 PTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTSEYRLLEVDW 250
P I V V V LDSI E M + ++ WKD RL P ++MT + RL+
Sbjct: 2 PAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSASNKSMTFDGRLV---- 57
Query: 251 LKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 58 -KKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAM 104
Score = 69 (29.3 bits), Expect = 3.4e-34, Sum P(3) = 3.4e-34
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + N YW +FA
Sbjct: 368 IDKYSRLIFPASYIFFNLIYWSVFA 392
Score = 43 (20.2 bits), Expect = 3.4e-34, Sum P(3) = 3.4e-34
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 261 FVFLSVLEYAAVN 273
>UNIPROTKB|G5E635 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0007601 "visual perception"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GeneTree:ENSGT00630000089571 OMA:GFRIFQN EMBL:DAAA02026443
Ensembl:ENSBTAT00000050515 Uniprot:G5E635
Length = 412
Score = 285 (105.4 bits), Expect = 3.4e-34, Sum P(3) = 3.4e-34
Identities = 61/158 (38%), Positives = 88/158 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 98 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 157
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 158 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 217
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 218 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 255
Score = 121 (47.7 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 34/108 (31%), Positives = 51/108 (47%)
Query: 196 PTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTSEYRLLEVDW 250
P I V V V LDSI E M + ++ WKD RL P ++MT + RL+
Sbjct: 2 PAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSASNKSMTFDGRLV---- 57
Query: 251 LKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 58 -KKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAM 104
Score = 69 (29.3 bits), Expect = 3.4e-34, Sum P(3) = 3.4e-34
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + N YW +FA
Sbjct: 388 IDKYSRLIFPASYIFFNLIYWSVFA 412
Score = 43 (20.2 bits), Expect = 3.4e-34, Sum P(3) = 3.4e-34
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 261 FVFLSVLEYAAVN 273
>WB|WBGene00017389 [details] [associations]
symbol:lgc-38 species:6239 "Caenorhabditis elegans"
[GO:0004890 "GABA-A receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 EMBL:FO080391
GeneTree:ENSGT00630000089685 HSSP:P23415 eggNOG:NOG265706 KO:K05195
HOGENOM:HOG000231336 PIR:T16035 RefSeq:NP_498532.3
ProteinModelPortal:Q19358 SMR:Q19358 PaxDb:Q19358
EnsemblMetazoa:F11H8.2 GeneID:3565717 KEGG:cel:CELE_F11H8.2
UCSC:F11H8.2 CTD:3565717 WormBase:F11H8.2 InParanoid:Q19358
OMA:RESIIEP NextBio:957591 Uniprot:Q19358
Length = 459
Score = 318 (117.0 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 58/159 (36%), Positives = 91/159 (57%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT+ +C M+ +P D QEC+L++ES ++T D+I+ W + +DE + L +
Sbjct: 169 RLTVTANCPMSLHTFPLDRQECALEVESYGYSTKDIIYHWHGTNAVTIDENVHLAHFTIG 228
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
++K + + STGN++ L F+ KR +G+YL Y P+ LIV++SWVSFW+ EA A
Sbjct: 229 EHKHIERTISLSTGNYSRLTAYFLFKRNIGFYLIQIYFPSSLIVVISWVSFWLNREAVQA 288
Query: 126 RXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
R + ASLP VSY+K++D F+ C
Sbjct: 289 RVAIGVTTVLTMTTLMTSTNASLPKVSYVKSLDVFLGVC 327
Score = 140 (54.3 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 32/114 (28%), Positives = 52/114 (45%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
+D+ P G P V V + ++ E SM Y D++ Q WKD RL E+ +
Sbjct: 62 HDRRIRPNYGGPPIEVNITAHVTTISAVSEVSMDYTLDLYLRQIWKDPRLAW-ESDVEDS 120
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +D +K +W PD+FF N K F T N ++ + +L ++ A
Sbjct: 121 LTIGIDMVKTIWTPDTFFPNEKKSFFHEATSHNSFLRIDNHGNVLRSIRLTVTA 174
Score = 64 (27.6 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D FSR FP+ F I + YW +
Sbjct: 433 VDLFSRFAFPIFFVIFHIVYWTYY 456
>UNIPROTKB|B7ZBQ7 [details] [associations]
symbol:GABRR1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 HOVERGEN:HBG051707 EMBL:AL353659 EMBL:AL353135
UniGene:Hs.99927 GeneID:2569 KEGG:hsa:2569 CTD:2569 HGNC:HGNC:4090
KO:K05190 GenomeRNAi:2569 GO:GO:0016917 IPI:IPI00940134
RefSeq:NP_001243633.1 RefSeq:NP_001254511.1 SMR:B7ZBQ7
STRING:B7ZBQ7 Ensembl:ENST00000369451 Uniprot:B7ZBQ7
Length = 392
Score = 277 (102.6 bits), Expect = 1.4e-33, Sum P(3) = 1.4e-33
Identities = 61/158 (38%), Positives = 86/158 (54%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 104 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 163
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 164 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 223
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 224 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 261
Score = 121 (47.7 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 38/117 (32%), Positives = 53/117 (45%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 1 MRPGF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 58
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL+ K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 59 DGRLV-----KKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 110
Score = 71 (30.1 bits), Expect = 1.4e-33, Sum P(3) = 1.4e-33
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + + N YW +F+
Sbjct: 368 IDKYSRIIFPAAYILFNLIYWSIFS 392
Score = 43 (20.2 bits), Expect = 1.4e-33, Sum P(3) = 1.4e-33
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 267 FVFLSVLEYAAVN 279
>ZFIN|ZDB-GENE-060825-164 [details] [associations]
symbol:gabrr2a "gamma-aminobutyric acid (GABA) A
receptor, rho 2a" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
ZFIN:ZDB-GENE-060825-164 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571 EMBL:CR759878
IPI:IPI00920044 ProteinModelPortal:F1QX34
Ensembl:ENSDART00000130881 Bgee:F1QX34 Uniprot:F1QX34
Length = 475
Score = 291 (107.5 bits), Expect = 3.5e-33, Sum P(3) = 3.5e-33
Identities = 61/158 (38%), Positives = 91/158 (57%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ +C M+F +P D+Q CSL++ES ++T +DL+ W + + L++DEKI L Q +
Sbjct: 176 RVTVTAACNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLSIDEKISLSQFLI 235
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 236 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 295
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 296 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 333
Score = 119 (46.9 bits), Expect = 3.7e-07, Sum P(3) = 3.7e-07
Identities = 34/112 (30%), Positives = 51/112 (45%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRL 245
MRP G P I V V V LDSI E M + ++ WKD RL + T++
Sbjct: 73 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFTSS-TNKSMT 129
Query: 246 LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +K +W PD FF ++K T N + ++ D +LY ++ A
Sbjct: 130 FDGRLVKKIWVPDVFFVHSKRSFIHDTTTENIMLRVFPDGHVLYSLRVTVTA 181
Score = 64 (27.6 bits), Expect = 3.5e-33, Sum P(3) = 3.5e-33
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID++SR+ FP + I N YW ++
Sbjct: 451 IDKYSRMIFPGAYIIFNLIYWSVY 474
Score = 43 (20.2 bits), Expect = 3.5e-33, Sum P(3) = 3.5e-33
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 339 FVFLSVLEYAAVN 351
>UNIPROTKB|E1BCQ5 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 OMA:RMMVQLA EMBL:DAAA02026450
IPI:IPI00714608 Ensembl:ENSBTAT00000015496 Uniprot:E1BCQ5
Length = 422
Score = 277 (102.6 bits), Expect = 3.7e-33, Sum P(3) = 3.7e-33
Identities = 61/158 (38%), Positives = 86/158 (54%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 134 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 193
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 194 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 253
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 254 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 291
Score = 121 (47.7 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 38/117 (32%), Positives = 53/117 (45%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 31 MRPGF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 88
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL+ K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 89 DGRLV-----KKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 140
Score = 71 (30.1 bits), Expect = 3.7e-33, Sum P(3) = 3.7e-33
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + + N YW +F+
Sbjct: 398 IDKYSRIIFPAAYILFNLIYWSIFS 422
Score = 43 (20.2 bits), Expect = 3.7e-33, Sum P(3) = 3.7e-33
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 297 FVFLSVLEYAAVN 309
>UNIPROTKB|F1S0D1 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 OMA:RMMVQLA EMBL:CU075926
Ensembl:ENSSSCT00000004771 Uniprot:F1S0D1
Length = 422
Score = 277 (102.6 bits), Expect = 3.7e-33, Sum P(3) = 3.7e-33
Identities = 61/158 (38%), Positives = 86/158 (54%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 134 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 193
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 194 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 253
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 254 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 291
Score = 121 (47.7 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 38/117 (32%), Positives = 53/117 (45%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 31 MRPGF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 88
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL+ K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 89 DGRLV-----KKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 140
Score = 71 (30.1 bits), Expect = 3.7e-33, Sum P(3) = 3.7e-33
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + + N YW +F+
Sbjct: 398 IDKYSRIIFPAAYILFNLIYWSIFS 422
Score = 43 (20.2 bits), Expect = 3.7e-33, Sum P(3) = 3.7e-33
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 297 FVFLSVLEYAAVN 309
>UNIPROTKB|Q0II76 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 KO:K05190 OrthoDB:EOG4RJG1G EMBL:BC122770
IPI:IPI00694785 RefSeq:NP_001071414.2 UniGene:Bt.74488
GeneID:522099 KEGG:bta:522099 CTD:2570 InParanoid:Q0II76
NextBio:20873445 Uniprot:Q0II76
Length = 465
Score = 285 (105.4 bits), Expect = 4.1e-33, Sum P(3) = 4.1e-33
Identities = 61/158 (38%), Positives = 88/158 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 290
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 328
Score = 127 (49.8 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 38/117 (32%), Positives = 55/117 (47%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 68 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSASNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL+ K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRLV-----KKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAM 177
Score = 69 (29.3 bits), Expect = 4.1e-33, Sum P(3) = 4.1e-33
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + N YW +FA
Sbjct: 441 IDKYSRLIFPASYIFFNLIYWSVFA 465
Score = 43 (20.2 bits), Expect = 4.1e-33, Sum P(3) = 4.1e-33
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 334 FVFLSVLEYAAVN 346
>ZFIN|ZDB-GENE-111215-5 [details] [associations]
symbol:gabrb2l "gamma-aminobutyric acid (GABA) A
receptor, beta 2 like" species:7955 "Danio rerio" [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 ZFIN:ZDB-GENE-111215-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG265706 EMBL:BC142872 IPI:IPI00854121 UniGene:Dr.111185
ProteinModelPortal:A5PLE3 Uniprot:A5PLE3
Length = 427
Score = 313 (115.2 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 61/162 (37%), Positives = 93/162 (57%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + E+IELPQ +
Sbjct: 155 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGNHAVTGVERIELPQFSI 214
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG++ L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 215 VDYKLISKNVVFSTGSYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 274
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 275 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 316
Score = 153 (58.9 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 47 KGYDIRLRPDFGGPPVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLN 106
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 107 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 161
Query: 299 MEYCLVNI 306
C++++
Sbjct: 162 ---CMMDL 166
Score = 63 (27.2 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARLLTGQP 341
FVF+AL+EY LVN + P +Q K E A+K N + P
Sbjct: 317 FVFLALLEYALVNYIFFGRG------PQQQKKAAERASKANNEKMRMDP 359
>UNIPROTKB|F1ND90 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008059 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01672 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GeneTree:ENSGT00630000089571 OMA:GFRIFQN EMBL:AADN02002377
IPI:IPI00593556 Ensembl:ENSGALT00000025443 Uniprot:F1ND90
Length = 436
Score = 284 (105.0 bits), Expect = 5.0e-33, Sum P(3) = 5.0e-33
Identities = 61/158 (38%), Positives = 87/158 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + L DEKI L Q +
Sbjct: 143 RITVTAMCNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKNGNESLKTDEKISLSQFLI 202
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 203 QKFHTTSRLAFYSSTGWYNRLYISFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 262
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 263 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 300
Score = 128 (50.1 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 35/113 (30%), Positives = 51/113 (45%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRL 245
MRP G P I V V V LDSI E M + ++ WKD RL P T+
Sbjct: 40 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPST-TNNSMT 96
Query: 246 LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 97 FDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAM 149
Score = 64 (27.6 bits), Expect = 5.0e-33, Sum P(3) = 5.0e-33
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + N YW +F+
Sbjct: 412 IDKYSRLIFPGTYIFFNLIYWSVFS 436
Score = 43 (20.2 bits), Expect = 5.0e-33, Sum P(3) = 5.0e-33
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 306 FVFLSVLEYAAVN 318
>ZFIN|ZDB-GENE-041014-174 [details] [associations]
symbol:gabrr2b "gamma-aminobutyric acid (GABA) A
receptor, rho 2b" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 ZFIN:ZDB-GENE-041014-174 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
EMBL:BX248418 IPI:IPI00497783 ProteinModelPortal:F1Q9D5
Ensembl:ENSDART00000023304 ArrayExpress:F1Q9D5 Uniprot:F1Q9D5
Length = 427
Score = 284 (105.0 bits), Expect = 7.3e-33, Sum P(3) = 7.3e-33
Identities = 60/158 (37%), Positives = 89/158 (56%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T+ +C M+F +P DTQ C+L++ES ++T +DL+ W + L+ D+KI L Q +
Sbjct: 134 RVTVTSACNMDFSRFPLDTQTCTLELESYAYTDEDLMLYWKSGDESLSTDDKISLSQFLI 193
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 194 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 253
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 254 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 291
Score = 124 (48.7 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 36/110 (32%), Positives = 51/110 (46%)
Query: 187 MRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTSE 242
MRP G V V V LDSI E M + ++ WKD RL P ++MT +
Sbjct: 31 MRPAFA-GPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSKHNKSMTFD 89
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
RL+ K +W PD FF ++K T N + +Y D +LY ++
Sbjct: 90 GRLV-----KKIWVPDVFFVHSKRSFIHDTTTENIMIRVYPDGHVLYSLR 134
Score = 60 (26.2 bits), Expect = 7.3e-33, Sum P(3) = 7.3e-33
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID +SR+ FP F N YW ++
Sbjct: 403 IDAYSRMIFPGAFIFFNLIYWSVY 426
Score = 43 (20.2 bits), Expect = 7.3e-33, Sum P(3) = 7.3e-33
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 297 FVFLSVLEYAAVN 309
>MGI|MGI:95626 [details] [associations]
symbol:Gabrr2 "gamma-aminobutyric acid (GABA) C receptor,
subunit rho 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO;IMP] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=TAS]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IMP] [GO:0007601 "visual perception" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030424 "axon" evidence=TAS] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=IMP] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
MGI:MGI:95626 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0007601 EMBL:CH466538 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571 KO:K05190
OrthoDB:EOG4RJG1G CTD:2570 OMA:GFRIFQN EMBL:AF024621 EMBL:BC057957
IPI:IPI00113786 RefSeq:NP_032102.2 UniGene:Mm.6227
ProteinModelPortal:P56476 STRING:P56476 PhosphoSite:P56476
PRIDE:P56476 Ensembl:ENSMUST00000024035 Ensembl:ENSMUST00000108162
GeneID:14409 KEGG:mmu:14409 InParanoid:Q6PEP0 ChEMBL:CHEMBL2220
NextBio:285985 Bgee:P56476 Genevestigator:P56476
GermOnline:ENSMUSG00000023267 Uniprot:P56476
Length = 465
Score = 281 (104.0 bits), Expect = 8.3e-33, Sum P(3) = 8.3e-33
Identities = 60/158 (37%), Positives = 88/158 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAV 290
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY++AVD ++
Sbjct: 291 PARVSLGIMTVLTMSTIITGVNASMPRVSYIRAVDIYL 328
Score = 123 (48.4 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 33/113 (29%), Positives = 53/113 (46%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRL 245
MRP G P I V V V LDSI E M + ++ W+D RL P + +++
Sbjct: 68 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWRDERLAFPSS-SNKSMT 124
Query: 246 LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 125 FDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
Score = 71 (30.1 bits), Expect = 8.3e-33, Sum P(3) = 8.3e-33
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + + N YW +F+
Sbjct: 441 IDKYSRLIFPAFYIVFNLIYWSVFS 465
Score = 43 (20.2 bits), Expect = 8.3e-33, Sum P(3) = 8.3e-33
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 334 FVFLSVLEYAAVN 346
>RGD|61902 [details] [associations]
symbol:Gabrr2 "gamma-aminobutyric acid (GABA) A receptor, rho 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=ISO;IDA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=TAS] [GO:0005254
"chloride channel activity" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA;ISO] [GO:0007601 "visual perception"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=ISO] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 RGD:61902 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707 GO:GO:0005237
eggNOG:NOG77438 HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571
KO:K05190 OrthoDB:EOG4RJG1G CTD:2570 EMBL:D38494 IPI:IPI00231130
PIR:I56523 RefSeq:NP_058988.1 UniGene:Rn.48659 STRING:P47742
Ensembl:ENSRNOT00000009973 GeneID:29695 KEGG:rno:29695
UCSC:RGD:61902 InParanoid:P47742 OMA:KIRTGKP BindingDB:P47742
ChEMBL:CHEMBL2953 NextBio:610094 Genevestigator:P47742
GermOnline:ENSRNOG00000007490 Uniprot:P47742
Length = 465
Score = 281 (104.0 bits), Expect = 8.3e-33, Sum P(3) = 8.3e-33
Identities = 60/158 (37%), Positives = 88/158 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAV 290
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY++AVD ++
Sbjct: 291 PARVSLGIMTVLTMSTIITGVNASMPRVSYIRAVDIYL 328
Score = 121 (47.7 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 36/115 (31%), Positives = 53/115 (46%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRL 245
MRP G P I V V V LDSI E M + ++ W+D RL P +S R
Sbjct: 68 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWRDERLAFP---SSSNRS 122
Query: 246 LEVDW--LKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ D +K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 123 MTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
Score = 71 (30.1 bits), Expect = 8.3e-33, Sum P(3) = 8.3e-33
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + + N YW +F+
Sbjct: 441 IDKYSRLIFPAFYIVFNLIYWSVFS 465
Score = 43 (20.2 bits), Expect = 8.3e-33, Sum P(3) = 8.3e-33
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 334 FVFLSVLEYAAVN 346
>UNIPROTKB|I3LKA9 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007601 "visual perception" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0007601 GeneTree:ENSGT00630000089571 OMA:GFRIFQN
EMBL:CU075926 Ensembl:ENSSSCT00000028234 Uniprot:I3LKA9
Length = 488
Score = 285 (105.4 bits), Expect = 8.8e-33, Sum P(3) = 8.8e-33
Identities = 61/158 (38%), Positives = 88/158 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 194 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 253
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 254 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 313
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 314 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 351
Score = 127 (49.8 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 38/117 (32%), Positives = 55/117 (47%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 91 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSMTF 148
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL+ K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 149 DGRLV-----KKIWVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGQVLYSMRITVTAM 200
Score = 69 (29.3 bits), Expect = 8.8e-33, Sum P(3) = 8.8e-33
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + N YW +FA
Sbjct: 464 IDKYSRLIFPASYIFFNLIYWSVFA 488
Score = 43 (20.2 bits), Expect = 8.8e-33, Sum P(3) = 8.8e-33
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 357 FVFLSVLEYAAVN 369
>UNIPROTKB|P28476 [details] [associations]
symbol:GABRR2 "Gamma-aminobutyric acid receptor subunit
rho-2" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008059
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672 PROSITE:PS00236
GO:GO:0005887 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0007601 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05190
OrthoDB:EOG4RJG1G CTD:2570 EMBL:M86868 EMBL:AL121833 EMBL:BC130352
EMBL:BC130354 IPI:IPI00293005 PIR:A38079 RefSeq:NP_002034.3
UniGene:Hs.719891 ProteinModelPortal:P28476 STRING:P28476
PhosphoSite:P28476 DMDM:306526281 PRIDE:P28476 DNASU:2570
Ensembl:ENST00000402938 GeneID:2570 KEGG:hsa:2570 UCSC:uc003pnb.2
GeneCards:GC06M089967 H-InvDB:HIX0200918 HGNC:HGNC:4091
HPA:HPA016467 MIM:137162 neXtProt:NX_P28476 PharmGKB:PA28506
InParanoid:P28476 OMA:GFRIFQN PhylomeDB:P28476 BindingDB:P28476
ChEMBL:CHEMBL2375 ChiTaRS:GABRR2 GenomeRNAi:2570 NextBio:10165
ArrayExpress:P28476 Bgee:P28476 Genevestigator:P28476
GermOnline:ENSG00000111886 Uniprot:P28476
Length = 465
Score = 284 (105.0 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 61/158 (38%), Positives = 88/158 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 171 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 230
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 231 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 290
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 291 PARVSLGITTVLTMTTIITGVNASMPRVSYVKAVDIYL 328
Score = 116 (45.9 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 37/117 (31%), Positives = 54/117 (46%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL ++MT
Sbjct: 68 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFSSASNKSMTF 125
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL+ K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 126 DGRLV-----KKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 177
Score = 66 (28.3 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + N YW +F+
Sbjct: 441 IDKYSRLIFPASYIFFNLIYWSVFS 465
Score = 43 (20.2 bits), Expect = 1.2e-32, Sum P(3) = 1.2e-32
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 334 FVFLSVLEYAAVN 346
>UNIPROTKB|Q90590 [details] [associations]
symbol:GABARB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG77438 GeneTree:ENSGT00630000089685 HOGENOM:HOG000231335
OrthoDB:EOG45756F HSSP:P23415 EMBL:AADN02035869 EMBL:AADN02035870
EMBL:AADN02035871 EMBL:AADN02035872 EMBL:AADN02035873
EMBL:AADN02035874 EMBL:X72806 IPI:IPI00594639 PIR:JH0828
UniGene:Gga.734 Ensembl:ENSGALT00000002584 Uniprot:Q90590
Length = 430
Score = 308 (113.5 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 61/162 (37%), Positives = 92/162 (56%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T +C M+ YP D Q C+L++ES +TTDD+ F W + + KIELPQ +
Sbjct: 153 RITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDNAVTGVTKIELPQFSI 212
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V K + V+STG + L + F LKR +GY++ TY+P+ LI I+SWVSFWI +A+
Sbjct: 213 VDYKLITKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASA 272
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR + + +LP + Y+KA+D ++ C V
Sbjct: 273 ARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFV 314
Score = 155 (59.6 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPEN 238
K YD P G P V ++ + +D + E +M Y ++F Q W+D RL +P N
Sbjct: 45 KGYDIRLRPDFGGPPVAVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLN 104
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+T + R+ + +W PD++F N K +T+ N + L+ D T+LY ++ A
Sbjct: 105 LTLDNRVAD-----QLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA 159
Query: 299 MEYCLVNI 306
C++++
Sbjct: 160 ---CMMDL 164
Score = 64 (27.6 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKEN 333
FVFMAL+EY LVN + P +Q K E AA N
Sbjct: 315 FVFMALLEYALVNYIFFGRG------PQRQKKAAEKAASAN 349
>UNIPROTKB|I3LHK1 [details] [associations]
symbol:GABRB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 Pfam:PF02932 PRINTS:PR00253
PRINTS:PR01160 GO:GO:0016021 GO:GO:0005886 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:YRKPMSS EMBL:CU469276 EMBL:FP236605 Ensembl:ENSSSCT00000025719
Uniprot:I3LHK1
Length = 301
Score = 243 (90.6 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 50/141 (35%), Positives = 76/141 (53%)
Query: 27 CSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQLVKNKTADCSQVYSTGNFTCLE 85
C++ S +TTDD+ F W+ E + KIELPQ +V K ++TG + L
Sbjct: 2 CAVSWFSDGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLS 61
Query: 86 VIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARXXXXXXXXXXXXXQHAKSQ 145
+ F LKR +GY++ TY+P+ LI I+SWVSFWI +A+ AR +
Sbjct: 62 LSFRLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLR 121
Query: 146 ASLPPVSYLKAVDAFMSACTV 166
+LP + Y+KA+D ++ C V
Sbjct: 122 ETLPKIPYVKAIDIYLMGCFV 142
Score = 81 (33.6 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMF 388
+ID++SR+FFP+ F++ N YW+ +
Sbjct: 275 SIDKWSRMFFPITFSLFNVVYWLYY 299
Score = 58 (25.5 bits), Expect = 1.3e-32, Sum P(3) = 1.3e-32
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDK 324
FVF+AL+EY VN + P+ KQD+
Sbjct: 143 FVFLALLEYAFVNYIFFGKG-PQKKGAGKQDQ 173
>UNIPROTKB|F1ND89 [details] [associations]
symbol:GABRR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008058
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01671 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
OMA:RMMVQLA EMBL:AADN02002380 EMBL:AADN02002378 EMBL:AADN02002379
IPI:IPI00595666 Ensembl:ENSGALT00000025445 Uniprot:F1ND89
Length = 438
Score = 278 (102.9 bits), Expect = 1.4e-32, Sum P(3) = 1.4e-32
Identities = 61/158 (38%), Positives = 87/158 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W + L DE+I L Q +
Sbjct: 152 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKNGNDSLKTDERISLSQFLI 211
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 212 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 271
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 272 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 309
Score = 123 (48.4 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 38/117 (32%), Positives = 54/117 (46%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 49 MRPGF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNQSMTF 106
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL+ K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 107 DGRLV-----KKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 158
Score = 68 (29.0 bits), Expect = 1.4e-32, Sum P(3) = 1.4e-32
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + + N YW +F+
Sbjct: 414 IDKYSRIIFPGAYILFNLIYWSIFS 438
Score = 43 (20.2 bits), Expect = 1.4e-32, Sum P(3) = 1.4e-32
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 315 FVFLSVLEYAAVN 327
>WB|WBGene00001593 [details] [associations]
symbol:glc-3 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0031987 "locomotion
involved in locomotory behavior" evidence=IMP] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR007110 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 PROSITE:PS50835
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0031987
GeneTree:ENSGT00630000089685 HSSP:P23415 KO:K05273 EMBL:AJ243914
EMBL:FO081092 PIR:T29742 RefSeq:NP_504441.1 UniGene:Cel.18004
ProteinModelPortal:G5EEZ3 SMR:G5EEZ3 EnsemblMetazoa:ZC317.3
GeneID:178930 KEGG:cel:CELE_ZC317.3 CTD:178930 WormBase:ZC317.3
OMA:IPSTMLV NextBio:903170 Uniprot:G5EEZ3
Length = 484
Score = 309 (113.8 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 57/161 (35%), Positives = 90/161 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIE--LPQLQ 63
R+++ LSC M+ YP D Q C + + S ++T +D+ ++W P+ + + + LP +
Sbjct: 154 RISMVLSCPMHLQYYPMDVQTCLIDLASYAYTENDIEYRWKKTDPVQLKKGLHSSLPSFE 213
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L T C+ +TG ++CL + L+R+ YYL YIP+ ++VI+SWVSFW+ A
Sbjct: 214 LNNVDTTLCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAV 273
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR Q + A LPPVSY KA+D ++ AC
Sbjct: 274 PARVTLGVTTLLTMTTQASGINAKLPPVSYTKAIDVWIGAC 314
Score = 145 (56.1 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 43/144 (29%), Positives = 70/144 (48%)
Query: 164 CTVSSTSLTFNDILPEDPKLYD-KMRPPKKE----GQ--PTIVYFHVTVMGLDSIDENSM 216
C SS + +L K YD ++RPP G IVY ++ + + ID+ +M
Sbjct: 22 CDASSDTEIIKKLLG---KGYDWRVRPPGINLTIPGTHGAVIVYVNMLIRSISKIDDVNM 78
Query: 217 TYAADIFFAQTWKDHRLR--LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTI 274
Y+ + F + W D RL P + T ++ +L + +W PDSFF+N K +
Sbjct: 79 EYSVQLTFREEWVDGRLAYGFPGDSTPDFLILTAG--QQIWMPDSFFQNEKQAHKHDIDK 136
Query: 275 PNHYVWLYKDKTILYMVKFVFMAL 298
PN + +++D ILY V+ + M L
Sbjct: 137 PNVLIRIHRDGRILYSVR-ISMVL 159
Score = 68 (29.0 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 366 DRFSRVFFPVLFAILNCTYWIMFAEF 391
D SRV FP LF N YW ++++
Sbjct: 453 DLISRVLFPTLFVCFNFVYWTKYSQY 478
>UNIPROTKB|E2R4R0 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007601 "visual perception" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008059 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007601
GeneTree:ENSGT00630000089571 KO:K05190 CTD:2570 EMBL:AAEX03008512
EMBL:AAEX03008511 RefSeq:XP_539039.2 Ensembl:ENSCAFT00000004973
GeneID:481918 KEGG:cfa:481918 Uniprot:E2R4R0
Length = 490
Score = 285 (105.4 bits), Expect = 1.9e-32, Sum P(3) = 1.9e-32
Identities = 61/158 (38%), Positives = 88/158 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + + L DEKI L Q +
Sbjct: 196 RITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLI 255
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 256 QKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 315
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 316 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 353
Score = 124 (48.7 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 38/117 (32%), Positives = 55/117 (47%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P ++MT
Sbjct: 93 MRPAF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLAFPSTSNKSMTF 150
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL+ K +W PD FF ++K T N + ++ D +LY ++ A+
Sbjct: 151 DGRLV-----KKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAM 202
Score = 66 (28.3 bits), Expect = 1.9e-32, Sum P(3) = 1.9e-32
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + N YW +F+
Sbjct: 466 IDKYSRLIFPASYIFFNLIYWSVFS 490
Score = 43 (20.2 bits), Expect = 1.9e-32, Sum P(3) = 1.9e-32
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 359 FVFLSVLEYAAVN 371
>UNIPROTKB|P24046 [details] [associations]
symbol:GABRR1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008058
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671 PROSITE:PS00236
GO:GO:0005887 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00466
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 EMBL:M62400
EMBL:AK296124 EMBL:AL353659 EMBL:AL353135 EMBL:BC130344
IPI:IPI00747264 IPI:IPI00921480 PIR:A38627 RefSeq:NP_001243632.1
RefSeq:NP_002033.2 UniGene:Hs.99927 ProteinModelPortal:P24046
SMR:P24046 IntAct:P24046 STRING:P24046 PhosphoSite:P24046
DMDM:223590210 PRIDE:P24046 DNASU:2569 Ensembl:ENST00000435811
Ensembl:ENST00000454853 GeneID:2569 KEGG:hsa:2569 UCSC:uc003pna.2
UCSC:uc011dzv.1 CTD:2569 GeneCards:GC06M089944 HGNC:HGNC:4090
MIM:137161 neXtProt:NX_P24046 PharmGKB:PA28505 InParanoid:P24046
KO:K05190 OMA:RMMVQLA OrthoDB:EOG4RJG1G BindingDB:P24046
ChEMBL:CHEMBL3561 GenomeRNAi:2569 NextBio:10161 ArrayExpress:P24046
Bgee:P24046 CleanEx:HS_GABRR1 Genevestigator:P24046
GermOnline:ENSG00000146276 Uniprot:P24046
Length = 479
Score = 277 (102.6 bits), Expect = 3.9e-32, Sum P(3) = 3.9e-32
Identities = 61/158 (38%), Positives = 86/158 (54%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 191 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 250
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 251 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 310
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 311 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 348
Score = 121 (47.7 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 38/117 (32%), Positives = 53/117 (45%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 88 MRPGF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 145
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL+ K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 146 DGRLV-----KKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 197
Score = 71 (30.1 bits), Expect = 3.9e-32, Sum P(3) = 3.9e-32
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + + N YW +F+
Sbjct: 455 IDKYSRIIFPAAYILFNLIYWSIFS 479
Score = 43 (20.2 bits), Expect = 3.9e-32, Sum P(3) = 3.9e-32
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 354 FVFLSVLEYAAVN 366
>MGI|MGI:95625 [details] [associations]
symbol:Gabrr1 "gamma-aminobutyric acid (GABA) C receptor,
subunit rho 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016917 "GABA receptor activity"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008057 InterPro:IPR008058
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671 PROSITE:PS00236
MGI:MGI:95625 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571 CTD:2569
KO:K05190 OrthoDB:EOG4RJG1G EMBL:AF024620 EMBL:AL670464
IPI:IPI00113785 RefSeq:NP_032101.3 UniGene:Mm.14116
ProteinModelPortal:P56475 SMR:P56475 STRING:P56475
PhosphoSite:P56475 PRIDE:P56475 Ensembl:ENSMUST00000029947
GeneID:14408 KEGG:mmu:14408 UCSC:uc008sfr.1 InParanoid:A3KG51
ChEMBL:CHEMBL2790 NextBio:285981 Bgee:P56475 Genevestigator:P56475
GermOnline:ENSMUSG00000028280 Uniprot:P56475
Length = 480
Score = 277 (102.6 bits), Expect = 4.0e-32, Sum P(3) = 4.0e-32
Identities = 61/158 (38%), Positives = 86/158 (54%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 192 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 251
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 252 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 311
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 312 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 349
Score = 121 (47.7 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 38/117 (32%), Positives = 53/117 (45%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN----MTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P + MT
Sbjct: 89 MRPGF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSSNNLSMTF 146
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL+ K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 147 DGRLV-----KKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 198
Score = 71 (30.1 bits), Expect = 4.0e-32, Sum P(3) = 4.0e-32
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + + N YW +F+
Sbjct: 456 IDKYSRIIFPAAYILFNLIYWSIFS 480
Score = 43 (20.2 bits), Expect = 4.0e-32, Sum P(3) = 4.0e-32
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 355 FVFLSVLEYAAVN 367
>RGD|61900 [details] [associations]
symbol:Gabrr1 "gamma-aminobutyric acid (GABA) A receptor, rho 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007601 "visual perception" evidence=NAS] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016917 "GABA receptor activity"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008058 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671
PROSITE:PS00236 RGD:61900 GO:GO:0005886 GO:GO:0042803 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007601 GO:GO:0046982 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 eggNOG:NOG77438 HOGENOM:HOG000231335 KO:K05190
OrthoDB:EOG4RJG1G EMBL:U21070 EMBL:X95579 IPI:IPI00199471
UniGene:Rn.33552 ProteinModelPortal:P50572 STRING:P50572
PhosphoSite:P50572 PRIDE:P50572 KEGG:rno:29694 UCSC:RGD:61900
InParanoid:P50572 BindingDB:P50572 ChEMBL:CHEMBL3588 NextBio:610090
ArrayExpress:P50572 Genevestigator:P50572
GermOnline:ENSRNOG00000007603 GO:GO:0016917 Uniprot:P50572
Length = 480
Score = 277 (102.6 bits), Expect = 4.0e-32, Sum P(3) = 4.0e-32
Identities = 61/158 (38%), Positives = 86/158 (54%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 192 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 251
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 252 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 311
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 312 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 349
Score = 121 (47.7 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 38/117 (32%), Positives = 53/117 (45%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 89 MRPGF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 146
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL+ K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 147 DGRLV-----KKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 198
Score = 71 (30.1 bits), Expect = 4.0e-32, Sum P(3) = 4.0e-32
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + + N YW +F+
Sbjct: 456 IDKYSRIIFPAAYILFNLIYWSIFS 480
Score = 43 (20.2 bits), Expect = 4.0e-32, Sum P(3) = 4.0e-32
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 355 FVFLSVLEYAAVN 367
>UNIPROTKB|P50572 [details] [associations]
symbol:Gabrr1 "Gamma-aminobutyric acid receptor subunit
rho-1" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008057
InterPro:IPR008058 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01670 PRINTS:PR01671
PROSITE:PS00236 RGD:61900 GO:GO:0005886 GO:GO:0042803 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007601 GO:GO:0046982 GO:GO:0034707
GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 KO:K05190 OrthoDB:EOG4RJG1G EMBL:U21070
EMBL:X95579 IPI:IPI00199471 UniGene:Rn.33552
ProteinModelPortal:P50572 STRING:P50572 PhosphoSite:P50572
PRIDE:P50572 KEGG:rno:29694 UCSC:RGD:61900 InParanoid:P50572
BindingDB:P50572 ChEMBL:CHEMBL3588 NextBio:610090
ArrayExpress:P50572 Genevestigator:P50572
GermOnline:ENSRNOG00000007603 GO:GO:0016917 Uniprot:P50572
Length = 480
Score = 277 (102.6 bits), Expect = 4.0e-32, Sum P(3) = 4.0e-32
Identities = 61/158 (38%), Positives = 86/158 (54%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W L DE+I L Q +
Sbjct: 192 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLI 251
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 252 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 311
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 312 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 349
Score = 121 (47.7 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 38/117 (32%), Positives = 53/117 (45%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE----NMTS 241
MRP G P I V V V LDSI E M + ++ WKD RL P +MT
Sbjct: 89 MRPGF--GGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFPSTNNLSMTF 146
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ RL+ K +W PD FF ++K T N + + D +LY ++ A+
Sbjct: 147 DGRLV-----KKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM 198
Score = 71 (30.1 bits), Expect = 4.0e-32, Sum P(3) = 4.0e-32
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID++SR+ FP + + N YW +F+
Sbjct: 456 IDKYSRIIFPAAYILFNLIYWSIFS 480
Score = 43 (20.2 bits), Expect = 4.0e-32, Sum P(3) = 4.0e-32
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 355 FVFLSVLEYAAVN 367
>UNIPROTKB|Q75NA5 [details] [associations]
symbol:Rdl "Gamma-aminobutyric acid receptor subunit beta"
species:7370 "Musca domestica" [GO:0001505 "regulation of
neurotransmitter levels" evidence=ISS] [GO:0006836
"neurotransmitter transport" evidence=ISS] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISS]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISS]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISS]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030285
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006836
GO:GO:0034707 GO:GO:0005254 GO:GO:0001505 GO:GO:0008503 HSSP:P23415
EMBL:AB177547 EMBL:AF070935 ProteinModelPortal:Q75NA5
BindingDB:Q75NA5 ChEMBL:CHEMBL3986 DrugBank:DB00431 Uniprot:Q75NA5
Length = 576
Score = 298 (110.0 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 60/170 (35%), Positives = 97/170 (57%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP--LAVDEKIE 58
+T RLT+ SC MN +P D Q C +++ES +T D+ ++W+ E P + V ++
Sbjct: 171 ITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGPNSVGVSSEVS 229
Query: 59 LPQLQLVKNKTADCSQVYSTGNFTCL--EVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSF 116
LPQ +++ ++ +TGN++ L E+ FV R +GYYL YIP+ LIV++SWVSF
Sbjct: 230 LPQFKVLGHRQRAVEISLTTGNYSRLACEIQFV--RSMGYYLIQIYIPSGLIVVISWVSF 287
Query: 117 WIKPEAAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
W+ A PAR + + A+LP +SY+K++D ++ C V
Sbjct: 288 WLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 337
Score = 151 (58.2 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 39/142 (27%), Positives = 63/142 (44%)
Query: 159 AFMSACTVSSTSL---TFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENS 215
A ++A T + L + IL YDK P G P V + V+ + S+ E
Sbjct: 40 ATVNAATAGGSMLGDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVK 99
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M + D +F Q W D RL + E + +++KN+W PD+FF N K F T
Sbjct: 100 MDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTS 159
Query: 276 NHYVWLYKDKTILYMVKFVFMA 297
N ++ ++ +I ++ A
Sbjct: 160 NEFIRVHHSGSITRSIRLTITA 181
Score = 78 (32.5 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMF 388
+ID++SR+ FPV F N YWI++
Sbjct: 534 DIDKYSRIVFPVCFVCFNLMYWIIY 558
>WB|WBGene00001594 [details] [associations]
symbol:glc-4 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:FO080695 GeneTree:ENSGT00630000089685
HOGENOM:HOG000231336 RefSeq:NP_495489.2 ProteinModelPortal:Q95QT7
SMR:Q95QT7 PaxDb:Q95QT7 EnsemblMetazoa:C27H5.8 GeneID:182971
KEGG:cel:CELE_C27H5.8 UCSC:C27H5.8 CTD:182971 WormBase:C27H5.8
eggNOG:NOG238729 InParanoid:Q95QT7 OMA:HEGANGA NextBio:919482
Uniprot:Q95QT7
Length = 500
Score = 275 (101.9 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 56/163 (34%), Positives = 90/163 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIELPQLQL 64
RLTL L+C+M+ YP D Q C + S ++TT D+ + WD P + + LP ++
Sbjct: 175 RLTLHLACSMHLSRYPMDHQNCEIAFASYAYTTADIEYIWDVPAIQIHEGANGALPNFEI 234
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
K A C+ +TG ++CL+V L R ++L YIP+ ++V ++WVS+WI ++
Sbjct: 235 ASFKNASCTSKTNTGTYSCLKVEIRLNRVFSFFLLQLYIPSSMLVGVAWVSYWIDWKSTA 294
Query: 125 ARX-XXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
AR HA + ++LPPVSY K++D ++ AC V
Sbjct: 295 ARVPLAIVTLLTMITTSHAIN-SNLPPVSYAKSIDIWVGACVV 336
Score = 125 (49.1 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 32/127 (25%), Positives = 63/127 (49%)
Query: 171 LTFNDILPE-DPKLYDKMRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTW 228
+T D+L + D + R P + + + V + + + ++ E +M + A F Q W
Sbjct: 46 MTVCDLLQDYDAAVRPSGRTPYNDTRGAVMVTTSLNIRSISAVSEKNMEFVAQFRFRQEW 105
Query: 229 KDHRLRLPEN---MTSEYRLLEVDWL---KNMWRPDSFFKNAKAVTFQTMTIPNHYVWLY 282
D RLR E+ ++S+YR E + +++W PD+FF+N K + + N ++ +
Sbjct: 106 YDDRLRFIEHQGLLSSDYRNFEFIHVARDQSLWIPDTFFQNEKNGWYHMLNQENRFLKIR 165
Query: 283 KDKTILY 289
D ++Y
Sbjct: 166 SDGKLIY 172
Score = 64 (27.6 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFAE 390
ID +R+ FP+ F + N YW ++ E
Sbjct: 468 IDIIARIIFPLAFILFNFAYWSIYLE 493
Score = 49 (22.3 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 291 VKFVFMALMEYCLVNIV 307
V F+F +L+EY +VN V
Sbjct: 335 VVFIFFSLIEYAVVNYV 351
>WB|WBGene00001587 [details] [associations]
symbol:ggr-2 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 GO:GO:0016021 GO:GO:0005886 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
HOGENOM:HOG000231336 EMBL:FO080451 GeneID:191637
KEGG:cel:CELE_C45B2.4 CTD:191637 RefSeq:NP_001024472.2
ProteinModelPortal:Q2WF65 EnsemblMetazoa:C45B2.4a.1
EnsemblMetazoa:C45B2.4a.2 UCSC:C45B2.4b.2 WormBase:C45B2.4a
InParanoid:Q2WF65 OMA:IAMNDTA NextBio:949770 ArrayExpress:Q2WF65
Uniprot:Q2WF65
Length = 546
Score = 302 (111.4 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 53/159 (33%), Positives = 92/159 (57%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+++ + C +N +P D+Q C L++ S ++TT+ L+ +W + P+ + I + + +V
Sbjct: 149 RISMVVVCTLNLEKWPLDSQRCHLRILSYAYTTEQLVIKWKEDEPITRNPNIAMSDMHIV 208
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
C YSTG ++C+ F +KR + +++ +Y+PT LIV++SW SFW+ EA PA
Sbjct: 209 DLYPGLCDGNYSTGTWSCVTAEFFVKREITHHVMQSYVPTTLIVVISWFSFWLDVEAVPA 268
Query: 126 RXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
R Q ++ +LP VSY+KA+D +M AC
Sbjct: 269 RVSLAITTLLTLSTQANAARMALPEVSYMKAIDVWMGAC 307
Score = 182 (69.1 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 39/135 (28%), Positives = 70/135 (51%)
Query: 174 NDILPEDPKLYDKMRPPKKEGQP--TIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDH 231
+++L ++YD PP + + T+V + + G+ S +M + D++F Q W+D
Sbjct: 31 DNLLNAGRQVYDNQSPPVQHDKEEVTVVELAMYIEGMSSFRTQTMDFQLDVYFQQFWRDP 90
Query: 232 RLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMV 291
RL N T + + L MW+PD +F NA+ F +T PN VW+ D +ILY
Sbjct: 91 RLA--HNETRRVLVKDKAVLHKMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYDT 148
Query: 292 KFVFMALMEYCLVNI 306
+ ++++ C +N+
Sbjct: 149 R---ISMVVVCTLNL 160
Score = 71 (30.1 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+ SR FP+ F I N TYWI +
Sbjct: 518 IDQTSRWIFPLTFIIFNLTYWIYY 541
>UNIPROTKB|Q9BLY8 [details] [associations]
symbol:Rdl "Gamma-aminobutyric acid receptor subunit beta"
species:7240 "Drosophila simulans" [GO:0006811 "ion transport"
evidence=ISS] [GO:0007268 "synaptic transmission" evidence=ISS]
[GO:0030594 "neurotransmitter receptor activity" evidence=ISS]
InterPro:IPR002289 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01160 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0006811 GO:GO:0034707
GO:GO:0005254 OrthoDB:EOG44B8HM EMBL:AY017266
ProteinModelPortal:Q9BLY8 FlyBase:FBgn0012851 Uniprot:Q9BLY8
Length = 606
Score = 298 (110.0 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 60/170 (35%), Positives = 97/170 (57%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP--LAVDEKIE 58
+T RLT+ SC MN +P D Q C +++ES +T D+ ++W+ E P + V ++
Sbjct: 173 ITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGPNSVGVSSEVS 231
Query: 59 LPQLQLVKNKTADCSQVYSTGNFTCL--EVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSF 116
LPQ +++ ++ +TGN++ L E+ FV R +GYYL YIP+ LIV++SWVSF
Sbjct: 232 LPQFKVLGHRQRAMEISLTTGNYSRLACEIQFV--RSMGYYLIQIYIPSGLIVVISWVSF 289
Query: 117 WIKPEAAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
W+ A PAR + + A+LP +SY+K++D ++ C V
Sbjct: 290 WLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 339
Score = 149 (57.5 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + V+ + S+ E M + D +F Q W D RL + E
Sbjct: 70 YDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVET 129
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +++KN+W PD+FF N K F T N ++ ++ +I ++ A
Sbjct: 130 LSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITA 183
Score = 78 (32.5 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMF 388
+ID++SR+ FPV F N YWI++
Sbjct: 565 DIDKYSRIVFPVCFVCFNLMYWIIY 589
>FB|FBgn0004244 [details] [associations]
symbol:Rdl "Resistant to dieldrin" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0046682 "response to cyclodiene" evidence=NAS] [GO:0004890
"GABA-A receptor activity" evidence=IEA;NAS;TAS] [GO:0016021
"integral to membrane" evidence=IEA;NAS] [GO:0050805 "negative
regulation of synaptic transmission" evidence=IMP] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0009612 "response to mechanical
stimulus" evidence=IGI] [GO:0030424 "axon" evidence=IDA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0090328 "regulation of
olfactory learning" evidence=IMP] [GO:0030431 "sleep" evidence=IMP]
[GO:0042749 "regulation of circadian sleep/wake cycle"
evidence=IMP] InterPro:IPR002289 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01160 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 EMBL:AE014296 GO:GO:0009612 GO:GO:0030431
GO:GO:0030594 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0006811
GO:GO:0030425 GO:GO:0050805 GO:GO:0034707 GO:GO:0005254
GeneTree:ENSGT00630000089685 EMBL:M69057 EMBL:U02042 EMBL:AY051418
EMBL:S61113 PIR:A41145 RefSeq:NP_523991.2 RefSeq:NP_729461.1
RefSeq:NP_729462.2 ProteinModelPortal:P25123 SMR:P25123
STRING:P25123 PaxDb:P25123 EnsemblMetazoa:FBtr0076536 GeneID:39054
KEGG:dme:Dmel_CG10537 CTD:39054 FlyBase:FBgn0004244
eggNOG:NOG265706 InParanoid:P25123 KO:K05195 OMA:GGMFGDV
OrthoDB:EOG44B8HM PhylomeDB:P25123 ChiTaRS:Rdl GenomeRNAi:39054
NextBio:811688 Bgee:P25123 GermOnline:CG10537 GO:GO:0042749
GO:GO:0090328 Uniprot:P25123
Length = 606
Score = 296 (109.3 bits), Expect = 2.8e-31, Sum P(2) = 2.8e-31
Identities = 60/169 (35%), Positives = 95/169 (56%)
Query: 1 MTSEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIEL 59
+T RLT+ SC MN +P D Q C +++ES +T D+ + W D + + ++EL
Sbjct: 173 ITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVEL 232
Query: 60 PQLQLVKNKTADCSQVYSTGNFTCL--EVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFW 117
PQ +++ ++ +TGN++ L E+ FV R +GYYL YIP+ LIVI+SWVSFW
Sbjct: 233 PQFRVLGHRQRATEINLTTGNYSRLACEIQFV--RSMGYYLIQIYIPSGLIVIISWVSFW 290
Query: 118 IKPEAAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
+ A PAR + + A+LP +SY+K++D ++ C V
Sbjct: 291 LNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFV 339
Score = 148 (57.2 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YDK P G P V + V+ + S+ E M + D +F Q W D RL + E
Sbjct: 70 YDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDPRLAYRKRPGVET 129
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+ +++KN+W PD+FF N K F T N ++ ++ +I ++ A
Sbjct: 130 LSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITA 183
Score = 78 (32.5 bits), Expect = 2.8e-31, Sum P(2) = 2.8e-31
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMF 388
+ID++SR+ FPV F N YWI++
Sbjct: 565 DIDKYSRIVFPVCFVCFNLMYWIIY 589
>ZFIN|ZDB-GENE-040724-212 [details] [associations]
symbol:gabrr1 "gamma-aminobutyric acid (GABA)
receptor, rho 1" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 ZFIN:ZDB-GENE-040724-212 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571 CTD:2569
OrthoDB:EOG4RJG1G EMBL:BX537249 EMBL:BX248418 IPI:IPI00509581
RefSeq:NP_001020724.1 UniGene:Dr.92000 SMR:Q5TZ16
Ensembl:ENSDART00000012376 GeneID:568984 KEGG:dre:568984
eggNOG:NOG244283 InParanoid:Q5TZ16 OMA:ENIMLRI NextBio:20889441
Uniprot:Q5TZ16
Length = 466
Score = 271 (100.5 bits), Expect = 2.9e-31, Sum P(3) = 2.9e-31
Identities = 60/158 (37%), Positives = 85/158 (53%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T+ C M+ +P DTQ CSL++ES ++T DDL+ W L D+KI L Q +
Sbjct: 176 RVTVTSMCNMDLSHFPLDTQTCSLEIESYAYTDDDLMLYWKRGNKSLQTDDKISLSQFLI 235
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 236 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 295
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 296 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 333
Score = 123 (48.4 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 33/107 (30%), Positives = 51/107 (47%)
Query: 187 MRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRL 245
MRP G P I V V + LD+I E M + ++ WKD RL P N T++
Sbjct: 73 MRPGF--GGPAIPVGVDVQLESLDTISEVDMDFTMTLYLRHYWKDARLSFPSN-TNQSMT 129
Query: 246 LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+ +K +W PD FF ++K T N + ++ D +LY ++
Sbjct: 130 FDGRLVKKIWVPDIFFVHSKRSFIHDTTTENVMLRVHPDGKVLYSLR 176
Score = 69 (29.3 bits), Expect = 2.9e-31, Sum P(3) = 2.9e-31
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFAE 390
ID++SRV FP + + N YW ++++
Sbjct: 441 IDKYSRVIFPGAYTLFNIIYWSIYSQ 466
Score = 42 (19.8 bits), Expect = 2.9e-31, Sum P(3) = 2.9e-31
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 339 FVFLSVIEYAAVN 351
>UNIPROTKB|E1B988 [details] [associations]
symbol:GABRR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 KO:K05190 CTD:200959 OMA:MDFTMTF
EMBL:DAAA02000976 EMBL:DAAA02000977 IPI:IPI00686902
RefSeq:NP_001179448.1 UniGene:Bt.106502 ProteinModelPortal:E1B988
Ensembl:ENSBTAT00000001857 GeneID:520166 KEGG:bta:520166
NextBio:20873038 Uniprot:E1B988
Length = 468
Score = 271 (100.5 bits), Expect = 3.9e-31, Sum P(3) = 3.9e-31
Identities = 58/158 (36%), Positives = 86/158 (54%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++ +DL+ W L DE I L Q +
Sbjct: 177 RITVSAMCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKHGNKSLNTDEHISLSQFFI 236
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ + YS TG + L + FVL+R + +++ TY P L+V++SWVSFWI A
Sbjct: 237 EEFSASSGFAFYSSTGWYNRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAV 296
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR + AS+P VSY+KAVD ++
Sbjct: 297 PARVSLGITTVLTMSTILSGVSASMPQVSYIKAVDVYL 334
Score = 138 (53.6 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 40/133 (30%), Positives = 62/133 (46%)
Query: 171 LTFNDILP-EDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWK 229
L + IL ED +D P G P V V V +DSI E M + + WK
Sbjct: 59 LKYKQILHIED---HDFAMRPGFGGSPVPVGIDVQVESIDSISEVDMDFTMTFYLRHYWK 115
Query: 230 DHRLRLP----ENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDK 285
D RL P ++MT ++RL+ K +W PD FF ++K T+ N + ++ D
Sbjct: 116 DERLAFPSKTNKSMTFDHRLI-----KKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDG 170
Query: 286 TILYMVKFVFMAL 298
++L+ V+ A+
Sbjct: 171 SVLFSVRITVSAM 183
Score = 64 (27.6 bits), Expect = 3.9e-31, Sum P(3) = 3.9e-31
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID +SR+ FP ++ + N YW ++
Sbjct: 444 IDTYSRILFPTVYIMFNLFYWSIY 467
Score = 46 (21.3 bits), Expect = 3.9e-31, Sum P(3) = 3.9e-31
Identities = 9/40 (22%), Positives = 22/40 (55%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKE 332
FVF++++EY VN + + + + K +++ + A +
Sbjct: 340 FVFLSVIEYAAVNYLTTVEERKRFKKTGKISRMYSIEATQ 379
>UNIPROTKB|A8MPY1 [details] [associations]
symbol:GABRR3 "Gamma-aminobutyric acid receptor subunit
rho-3" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=NAS] [GO:0007268 "synaptic transmission" evidence=NAS;TAS]
[GO:0004890 "GABA-A receptor activity" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_15518 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707 eggNOG:NOG77438
KO:K05190 EMBL:AC026100 EMBL:Y18994 IPI:IPI00879466
RefSeq:NP_001099050.1 UniGene:Hs.534578 ProteinModelPortal:A8MPY1
SMR:A8MPY1 PhosphoSite:A8MPY1 PRIDE:A8MPY1 GeneID:200959
KEGG:hsa:200959 CTD:200959 GeneCards:GC03M097705 HGNC:HGNC:17969
neXtProt:NX_A8MPY1 PharmGKB:PA134952133 BindingDB:A8MPY1
ChEMBL:CHEMBL2394 GenomeRNAi:200959 NextBio:90035 CleanEx:HS_GABRR3
Genevestigator:A8MPY1 Uniprot:A8MPY1
Length = 467
Score = 269 (99.8 bits), Expect = 8.5e-31, Sum P(3) = 8.5e-31
Identities = 58/159 (36%), Positives = 87/159 (54%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++ DDL+ W L +E + L Q
Sbjct: 177 RITVSAMCFMDFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNKSLNTEEHMSLSQF-F 235
Query: 65 VKNKTADCSQVY--STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+++ +A + STG + L + FVL+R + +++ TY P L+V++SWVSFWI A
Sbjct: 236 IEDFSASSGLAFYSSTGWYNRLFINFVLRRHVFFFVLQTYFPAILMVMLSWVSFWIDRRA 295
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSYLKAVD ++
Sbjct: 296 VPARVSLGITTVLTMSTIITAVSASMPQVSYLKAVDVYL 334
Score = 124 (48.7 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 187 MRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP----ENMTSE 242
MRP G P V V V +DSI E +M + + WKD RL P ++MT +
Sbjct: 74 MRPGFG-GSPVPVGIDVHVESIDSISETNMDFTMTFYLRHYWKDERLSFPSTANKSMTFD 132
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+RL + +W PD FF ++K T+ N + ++ D +L ++ A+
Sbjct: 133 HRLT-----RKIWVPDIFFVHSKRSFIHDTTMENIMLRVHPDGNVLLSLRITVSAM 183
Score = 66 (28.3 bits), Expect = 8.5e-31, Sum P(3) = 8.5e-31
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 365 IDRFSRVFFPVLFAILNCTYW 385
ID +SR+ FP+++ + N YW
Sbjct: 443 IDTYSRILFPIVYILFNLFYW 463
Score = 43 (20.2 bits), Expect = 8.5e-31, Sum P(3) = 8.5e-31
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAA 330
FVF++++EY VN + + + + K +++ + A
Sbjct: 340 FVFLSVIEYAAVNYLTTVEERKQFKKTGKISRMYNIDA 377
>WB|WBGene00018880 [details] [associations]
symbol:acc-3 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314 EMBL:FO080828
EMBL:AY849796 PIR:T16458 RefSeq:NP_508810.2 UniGene:Cel.25513
ProteinModelPortal:G5EDN0 SMR:G5EDN0 EnsemblMetazoa:F55D10.5
GeneID:186307 KEGG:cel:CELE_F55D10.5 CTD:186307 WormBase:F55D10.5
OMA:KMIPART NextBio:931382 Uniprot:G5EDN0
Length = 517
Score = 273 (101.2 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 57/162 (35%), Positives = 87/162 (53%)
Query: 5 YRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEK-IELPQL 62
YR+ +K C+M+F +P D Q C L +ES S+ ++ QW + PL++ +K I LP
Sbjct: 183 YRVQVKGPCSMDFSAFPMDQQSCHLTLESFSYNNQEVDMQWMNWTTPLSLLKKEIVLPDF 242
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ T+ ++Y G + L + FV RR G+Y+F YIPT L + +SW+SF + P+
Sbjct: 243 VMSNYSTSLKHEIYPAGVWNELTMTFVFSRRYGWYIFQAYIPTYLTIFISWISFCLGPKM 302
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR Q +LP VSY+KA+D +M C
Sbjct: 303 IPARTMLGVNSLLALTFQFGNIMRNLPRVSYVKALDVWMLVC 344
Score = 127 (49.8 bits), Expect = 5.2e-08, Sum P(3) = 5.2e-08
Identities = 28/105 (26%), Positives = 51/105 (48%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
Y R P + G IV+ V V ++S++E + + DI+ + W D LR +Y
Sbjct: 77 YKSFRTPSESG--VIVWIEVWVQEVNSVNEITSDFDMDIYVTELWMDSALRYEHLNPCKY 134
Query: 244 RL-LEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTI 287
L L + L +W+P++ F N+K+ N ++ +Y + T+
Sbjct: 135 NLSLNSEILDQIWKPNTVFINSKSANIHKSPFKNVFLMIYPNGTV 179
Score = 66 (28.3 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR S + FP LF + N YW +
Sbjct: 489 IDRLSMIMFPGLFTLFNIIYWTYY 512
Score = 42 (19.8 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 284 DKTILYMVKFVFMALMEYCLVNIVLGDSDLPKPPEPAKQDK 324
D +L + FVF +L+E ++ + S+ + + +QD+
Sbjct: 338 DVWMLVCLTFVFCSLLELAIIGSMGARSENRQAQQQKQQDE 378
>WB|WBGene00020767 [details] [associations]
symbol:lgc-40 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314 HSSP:P23415
HOGENOM:HOG000231336 KO:K05397 EMBL:FO081414 PIR:T16935
RefSeq:NP_508428.2 ProteinModelPortal:Q22741 SMR:Q22741
IntAct:Q22741 MINT:MINT-214095 TCDB:1.A.9.6.4 PaxDb:Q22741
EnsemblMetazoa:T24D8.1 GeneID:188854 KEGG:cel:CELE_T24D8.1
UCSC:T24D8.1 CTD:188854 WormBase:T24D8.1 eggNOG:NOG328391
InParanoid:Q22741 OMA:VISWFNF NextBio:940332 Uniprot:Q22741
Length = 494
Score = 292 (107.8 bits), Expect = 6.5e-30, Sum P(2) = 6.5e-30
Identities = 59/197 (29%), Positives = 108/197 (54%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPL-AVDEK--IELPQL 62
R+++ SC M+ YP D+QEC+L++ S ++ L W + + A+D I +P +
Sbjct: 151 RISIVSSCNMDLWKYPLDSQECALRILSYAYPMTVLRLLWSEKEDVPAIDRNPDITMPDM 210
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
L +T C+ Y+TG ++C+ IF ++R + +++ TY+PT LIV++SW +FW++ ++
Sbjct: 211 SLKHIRTGYCNGTYATGEWSCMTAIFYVEREMMHHVMQTYVPTALIVVISWFNFWLEIDS 270
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPK 182
APAR Q + +LP VSY+KA+D +M +C + + K
Sbjct: 271 APARVSLSITTLLTISTQANAVKLALPEVSYMKAIDVWMGSCMAFVFGVMIEFTICHYAK 330
Query: 183 LYDKMRPPKKEGQPTIV 199
+ +R +GQP+++
Sbjct: 331 NLEMLRG---DGQPSLI 344
Score = 184 (69.8 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 44/136 (32%), Positives = 71/136 (52%)
Query: 157 VDAFMSACTVSSTSLT--FNDILPEDPKLYDKMRPPKK-EGQPTIVYFHVTVMGLDSIDE 213
V+ F SA ++ LT F D L + LY++ P + +G PT V + + G+ S
Sbjct: 17 VNVFESA-DLAFIPLTKAFLDKLKNET-LYNRFATPTQYDGVPTNVTLSMFIEGMSSFSA 74
Query: 214 NSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMT 273
+M Y D++F + W DHRL N ++ + ++ K MW PD +F NA++ FQ +T
Sbjct: 75 QTMDYHLDVYFQEEWYDHRLA--HNASAPILVRDLTVFKMMWHPDVYFANARSAAFQDIT 132
Query: 274 IPNHYVWLYKDKTILY 289
N VW+Y + + Y
Sbjct: 133 DDNFLVWVYPNGRVWY 148
Score = 63 (27.2 bits), Expect = 6.5e-30, Sum P(2) = 6.5e-30
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFAEF 391
ID R+ FP++F + N YW + F
Sbjct: 467 IDERCRIVFPMIFLLFNVAYWSFYLVF 493
>RGD|621564 [details] [associations]
symbol:Gabrr3 "gamma-aminobutyric acid (GABA) A receptor, rho 3"
species:10116 "Rattus norvegicus" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 RGD:621564 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707
eggNOG:NOG77438 HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571
KO:K05190 CTD:200959 EMBL:D50671 IPI:IPI00199472 PIR:S65756
RefSeq:NP_620252.1 UniGene:Rn.10670 ProteinModelPortal:P50573
Ensembl:ENSRNOT00000002281 GeneID:192258 KEGG:rno:192258
UCSC:RGD:621564 InParanoid:P50573 OMA:MDFTMTF OrthoDB:EOG41G343
BindingDB:P50573 ChEMBL:CHEMBL5454 NextBio:622926
Genevestigator:P50573 GermOnline:ENSRNOG00000001679 Uniprot:P50573
Length = 464
Score = 266 (98.7 bits), Expect = 3.5e-29, Sum P(3) = 3.5e-29
Identities = 58/158 (36%), Positives = 85/158 (53%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++ +DL+ W L +E I L Q +
Sbjct: 174 RITVSAMCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKHGNKSLNTEEHISLSQFFI 233
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ + YS TG + L + FVL+R + +++ TY P L+V++SWVSFWI A
Sbjct: 234 EEFSASSGLAFYSSTGWYYRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAV 293
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD +M
Sbjct: 294 PARVSLGITTVLTMSTIVTGVSASMPQVSYVKAVDVYM 331
Score = 128 (50.1 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 30/115 (26%), Positives = 52/115 (45%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
+D P G P V V V +DSI E +M + + WKD RL P T++
Sbjct: 67 HDFSTRPGFGGSPVPVGIDVQVESIDSISEVNMDFTMTFYLRHYWKDERLSFPST-TNKS 125
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ ++ +W PD FF ++K T+ N + ++ D +L+ ++ A+
Sbjct: 126 MTFDRRLIQKIWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGNVLFSLRITVSAM 180
Score = 68 (29.0 bits), Expect = 3.5e-29, Sum P(3) = 3.5e-29
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 365 IDRFSRVFFPVLFAILNCTYW 385
ID +SR+ FPV++ I N YW
Sbjct: 440 IDTYSRIVFPVVYIIFNLFYW 460
Score = 42 (19.8 bits), Expect = 3.5e-29, Sum P(3) = 3.5e-29
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 337 FVFLSVIEYAAVN 349
>ZFIN|ZDB-GENE-081105-170 [details] [associations]
symbol:gabrd "gamma-aminobutyric acid (GABA) A
receptor, delta" species:7955 "Danio rerio" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 ZFIN:ZDB-GENE-081105-170
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 EMBL:FP017199 IPI:IPI00998683
Ensembl:ENSDART00000132000 ArrayExpress:E9QHL0 Bgee:E9QHL0
Uniprot:E9QHL0
Length = 469
Score = 267 (99.0 bits), Expect = 4.0e-29, Sum P(3) = 4.0e-29
Identities = 54/163 (33%), Positives = 84/163 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD-EKIELPQLQL 64
R+T ++C M+ YP D QEC L +ES ++++D+++ W L +K+EL Q +
Sbjct: 168 RITSTVACDMDLTKYPMDEQECMLDLESYGYSSEDIVYHWSESQKLIHGLDKLELSQFTI 227
Query: 65 VKNK-TADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ + S G F L + F L+R G Y+ +Y+P+ L+V MSWVSFWI A
Sbjct: 228 TDYRFVTEMMNFKSAGRFPRLSLRFQLRRNRGVYIIQSYMPSILLVAMSWVSFWISQSAV 287
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR +++SLP S +KA+D + C V
Sbjct: 288 PARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYV 330
Score = 127 (49.8 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 36/118 (30%), Positives = 54/118 (45%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMT----------YAADIFFAQTWKDH 231
K Y + P G P V + V +D I E +M Y +F Q+W+D
Sbjct: 50 KGYARNFRPGIGGPPVNVAMAIEVASIDHISEANMRIDTDMFVLKEYTMTVFLRQSWRDD 109
Query: 232 RLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
RL N T++ L+ ++ +W PD+F NAK+ F +T+ N + L D ILY
Sbjct: 110 RLSY--NHTNKTLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILY 165
Score = 67 (28.6 bits), Expect = 4.0e-29, Sum P(3) = 4.0e-29
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID ++R FP FA++N YW+ +
Sbjct: 444 IDIYARAVFPFTFAVVNVIYWVAY 467
Score = 37 (18.1 bits), Expect = 4.0e-29, Sum P(3) = 4.0e-29
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+EY +
Sbjct: 331 FVFAALIEYAFAH 343
>WB|WBGene00003386 [details] [associations]
symbol:mod-1 species:6239 "Caenorhabditis elegans"
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA;IDA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006821
"chloride transport" evidence=IDA] [GO:0007210 "serotonin receptor
signaling pathway" evidence=IMP;IDA] [GO:0042595 "behavioral
response to starvation" evidence=IMP] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0005254 "chloride channel activity" evidence=IDA]
[GO:0004993 "serotonin receptor activity" evidence=IDA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0005887
GO:GO:0004993 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0043025 GO:GO:0005254
GO:GO:0042595 GeneTree:ENSGT00540000070314 EMBL:FO081551
HOGENOM:HOG000016259 UniGene:Cel.8029 GeneID:179269
KEGG:cel:CELE_K06C4.6 CTD:179269 UCSC:K06C4.6a NextBio:904636
EMBL:AF303088 RefSeq:NP_741580.1 ProteinModelPortal:Q9GQ00
SMR:Q9GQ00 TCDB:1.A.9.6.1 EnsemblMetazoa:K06C4.6a.1
EnsemblMetazoa:K06C4.6a.2 WormBase:K06C4.6a InParanoid:Q9GQ00
OMA:NITMETR ArrayExpress:Q9GQ00 Uniprot:Q9GQ00
Length = 489
Score = 284 (105.0 bits), Expect = 5.1e-29, Sum P(2) = 5.1e-29
Identities = 57/160 (35%), Positives = 88/160 (55%)
Query: 5 YRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQL 64
+RL++K C ++ +P DTQ C L ES SH ++++ W E + + + I+LP +
Sbjct: 151 HRLSVKSPCNLDLRQFPFDTQTCILIFESYSHNSEEVELHWMEEA-VTLMKPIQLPDFDM 209
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
V T + +Y G + L+V F KRR G+Y+ Y+PT L +I+SWVSF ++P+A P
Sbjct: 210 VHYSTKKETLLYPNGYWDQLQVTFTFKRRYGFYIIQAYVPTYLTIIVSWVSFCMEPKALP 269
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR Q +LP VSY+KA+D +M C
Sbjct: 270 ARTTVGISSLLALTFQFGNILKNLPRVSYVKAMDVWMLGC 309
Score = 116 (45.9 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 36/110 (32%), Positives = 50/110 (45%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL---RLP---E 237
Y KM P ++ + HV MG S++E S + DI F Q W D L LP
Sbjct: 45 YTKMLPDAEDSVQVNIEIHVQDMG--SLNEISSDFEIDILFTQLWHDSALSFAHLPACKR 102
Query: 238 NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTI 287
N+T E RLL +W P++ N+K T N V LY++ T+
Sbjct: 103 NITMETRLLP-----KIWSPNTCMINSKRTTVHASPSENVMVILYENGTV 147
Score = 63 (27.2 bits), Expect = 5.1e-29, Sum P(2) = 5.1e-29
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYW 385
+D+FS V FP+ F + N YW
Sbjct: 456 VDKFSIVAFPLAFTMFNLVYW 476
>WB|WBGene00010275 [details] [associations]
symbol:acc-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 HOGENOM:HOG000016259 EMBL:Z68217
PIR:T22947 RefSeq:NP_501715.1 ProteinModelPortal:Q21005 SMR:Q21005
PaxDb:Q21005 EnsemblMetazoa:F58G6.4 GeneID:177799
KEGG:cel:CELE_F58G6.4 UCSC:F58G6.4 CTD:177799 WormBase:F58G6.4
eggNOG:NOG264158 InParanoid:Q21005 OMA:MELEQPY NextBio:898434
Uniprot:Q21005
Length = 466
Score = 283 (104.7 bits), Expect = 5.1e-29, Sum P(2) = 5.1e-29
Identities = 56/159 (35%), Positives = 86/159 (54%)
Query: 3 SEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQL 62
+ YR+ L C M +P D Q+C L ES ++ T ++ QW+ P+ + ++IELP
Sbjct: 148 TNYRMKLTGPCDMKLKRFPFDKQKCYLTFESFNYNTGEVRMQWNQPYPVILLKRIELPDF 207
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+LV Q+Y G + L V FV +RR G+Y+ YIPT + +++SW+SF++ P A
Sbjct: 208 KLVNFSVIAVEQMYPAGWWDELTVAFVFERRYGWYVLQGYIPTMVTIVISWISFYLGPRA 267
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR Q +LP VSY+KA+D +M
Sbjct: 268 IPARTMLGVNSLLAMTFQFGNIIRNLPRVSYVKAIDVWM 306
Score = 62 (26.9 bits), Expect = 5.1e-29, Sum P(2) = 5.1e-29
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D +S +FFP + + N +YW +
Sbjct: 426 VDFYSAIFFPTAYMLFNISYWSFY 449
>WB|WBGene00009799 [details] [associations]
symbol:lgc-47 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 EMBL:Z49888 EMBL:Z47069
UniGene:Cel.6333 GeneID:181193 KEGG:cel:CELE_F47A4.1 CTD:181193
NextBio:912842 RefSeq:NP_741878.1 ProteinModelPortal:G5EEX8
SMR:G5EEX8 EnsemblMetazoa:F47A4.1b WormBase:F47A4.1b OMA:GCANDTE
Uniprot:G5EEX8
Length = 428
Score = 275 (101.9 bits), Expect = 9.9e-29, Sum P(2) = 9.9e-29
Identities = 56/160 (35%), Positives = 89/160 (55%)
Query: 3 SEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQ 61
S +R+ C M+ +P D+ EC+L ES ++ D++ +W DP PL + + IELP
Sbjct: 175 SNWRIKSTGPCVMDLTKFPMDSIECTLTFESFNYNKDEVFMRWGDP--PLTIFKPIELPD 232
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
+ T++ Q+Y+ G ++ L V F+ +RR G+YL YIPT + V +SW+ F++ P+
Sbjct: 233 FTMTNFSTSNKFQLYAAGYWSELNVNFLFRRRSGWYLLQGYIPTYMTVFISWIPFYLGPK 292
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
A PAR Q +LP VSY+KA+D +M
Sbjct: 293 AIPARTMIGVNALLALTFQFGNIIRNLPRVSYIKAIDVWM 332
Score = 64 (27.6 bits), Expect = 9.9e-29, Sum P(2) = 9.9e-29
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D SR+ FPV+F N YW ++
Sbjct: 396 LDNTSRLMFPVVFTFYNFIYWFVY 419
>WB|WBGene00021437 [details] [associations]
symbol:lgc-42 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 HOGENOM:HOG000231336 EMBL:FO081640
RefSeq:NP_497489.3 ProteinModelPortal:Q9N517 SMR:Q9N517
DIP:DIP-26084N IntAct:Q9N517 MINT:MINT-1049455
EnsemblMetazoa:Y39A3B.2 GeneID:189722 KEGG:cel:CELE_Y39A3B.2
UCSC:Y39A3B.2 CTD:189722 WormBase:Y39A3B.2 eggNOG:NOG290789
InParanoid:Q9N517 OMA:CHIAIDR NextBio:943412 Uniprot:Q9N517
Length = 412
Score = 268 (99.4 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 58/168 (34%), Positives = 87/168 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+TL L+C ++ YP D Q C +++ S +H +++ W P P+ + +I+LP+ +
Sbjct: 134 RVTLNLACNLDLKDYPLDYQTCYIKVISYAHVKNEMNVSWFPNDPIRFNPEIDLPEFHIR 193
Query: 66 KNKTADCSQVY---------STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSF 116
C+ V+ G F+CL + LKR +G++L +YIPT LIV +SWVSF
Sbjct: 194 ALDKDYCNGVFLYTLTHNSSRVGEFSCLLGMLKLKRAIGFHLVQSYIPTGLIVAISWVSF 253
Query: 117 WIKPEAAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
WI A PAR Q + +LP VSY KA+D F C
Sbjct: 254 WIDRRAVPARVSLSFTTLLTLSTQGNGIRYALPAVSYAKAIDYFYGVC 301
Score = 129 (50.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 32/108 (29%), Positives = 50/108 (46%)
Query: 183 LYDKMRPPKKEGQ-PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTS 241
L DK P + P V+F V L + MTY D++ +W+D +R N T
Sbjct: 26 LQDKPMPRNGNPKAPLQVHFGFYVESLGNFRATEMTYDMDMYLYMSWQDDSMR--HNETE 83
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
+ + D L +W PD +F NA+ F +T+ N +++ TI Y
Sbjct: 84 HVLVNDKDILDKIWLPDLYFANARTAYFHKVTVHNFNMFISPQGTISY 131
Score = 68 (29.0 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 363 INIDRFSRVFFPVLFAILNCTYWIMF 388
++ID+ +R FP +FAI N YW+ +
Sbjct: 379 LSIDKAARFAFPCVFAIFNVFYWLYY 404
>WB|WBGene00021146 [details] [associations]
symbol:lgc-45 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231336 KO:K05397
EMBL:FO081775 PIR:F88103 RefSeq:NP_494579.1 UniGene:Cel.14158
ProteinModelPortal:O44917 SMR:O44917 EnsemblMetazoa:W10G11.16
GeneID:189344 KEGG:cel:CELE_W10G11.16 UCSC:W10G11.16 CTD:189344
WormBase:W10G11.16 eggNOG:NOG308614 InParanoid:O44917 OMA:FTILGHE
NextBio:942068 Uniprot:O44917
Length = 327
Score = 273 (101.2 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 54/164 (32%), Positives = 87/164 (53%)
Query: 4 EYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEK--IELPQ 61
E R+ +K SC + YPHD Q C L ++S ++ + + F+W A+D+ ++LP+
Sbjct: 73 ETRVKIKPSCNLILCKYPHDKQTCDLLIKSFAYPVETVRFEWFTRRKDAIDKNPDVKLPE 132
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L + + +T C +G F+CL +F LKR +G+++ TYIPT L ++ SWV W+ E
Sbjct: 133 LYIDRYETTTCPNERKSGAFSCLRAVFRLKRDVGFHIAQTYIPTSLALMFSWVGVWLPEE 192
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACT 165
R + A ++ LP VSYLKA+D + T
Sbjct: 193 FMEGRIGVAITVLLTLSTESAGAREHLPSVSYLKAIDLWFGFIT 236
Score = 126 (49.4 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 27/74 (36%), Positives = 39/74 (52%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M Y DI+ +W+D RL P + + E D L+ +WRPD FF NAK F +T
Sbjct: 1 MDYDMDIYLMMSWRDARLVNPYD--KPILVKEEDILEKIWRPDPFFANAKEAEFHEVTFL 58
Query: 276 NHYVWLYKDKTILY 289
N + ++ D +LY
Sbjct: 59 NFLMRIFPDGLVLY 72
Score = 60 (26.2 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFAE 390
+D F RVF+P+ F + Y+ +F E
Sbjct: 292 LDNFCRVFYPLSFILFLLMYYFVFTE 317
>UNIPROTKB|A8MWU7 [details] [associations]
symbol:GABRG2 "cDNA FLJ59748, highly similar to
Gamma-aminobutyric-acid receptor gamma-2 subunit" species:9606
"Homo sapiens" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
HOGENOM:HOG000231337 HOVERGEN:HBG051707 UniGene:Hs.7195
HGNC:HGNC:4087 EMBL:AC008611 EMBL:AC091926 EMBL:AC091984
EMBL:AK299640 IPI:IPI00982076 SMR:A8MWU7 STRING:A8MWU7
Ensembl:ENST00000393933 Uniprot:A8MWU7
Length = 372
Score = 258 (95.9 bits), Expect = 2.4e-28, Sum P(3) = 2.4e-28
Identities = 54/163 (33%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI-ELPQLQL 64
RLT+ C + +P D C L+ S + +++++QW D + L Q
Sbjct: 88 RLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSF 147
Query: 65 VK-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
V T + + S G++ + V F L RR+GY+ TYIP LIV++SWVSFWI +A
Sbjct: 148 VGLRNTTEVVKTTS-GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV 206
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 207 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 249
Score = 158 (60.7 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 34/110 (30%), Positives = 56/110 (50%)
Query: 205 VMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNA 264
V + ++ +M Y DIFFAQTW D RL+ N T + L + + +W PD+FF+N+
Sbjct: 3 VNSIGPVNAINMEYTIDIFFAQTWYDRRLKF--NSTIKVLRLNSNMVGKIWIPDTFFRNS 60
Query: 265 KAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVLGDSDLP 314
K +T PN + ++ D +LY ++ A + L N + + P
Sbjct: 61 KKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCP 110
Score = 72 (30.4 bits), Expect = 2.4e-28, Sum P(3) = 2.4e-28
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D ++R+FFP F + N YW+ +
Sbjct: 346 MDSYARIFFPTAFCLFNLVYWVSY 369
Score = 38 (18.4 bits), Expect = 2.4e-28, Sum P(3) = 2.4e-28
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQD 323
FVF AL+EY ++ + + K + K++
Sbjct: 250 FVFSALVEYGTLHYFVSNRKPSKDKDKKKKN 280
>UNIPROTKB|F1NWI6 [details] [associations]
symbol:GABRR2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008059 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00253 PRINTS:PR01672
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GeneTree:ENSGT00630000089571
EMBL:AADN02002377 IPI:IPI00680961 Ensembl:ENSGALT00000031682
Uniprot:F1NWI6
Length = 298
Score = 284 (105.0 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 61/158 (38%), Positives = 87/158 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P D+Q CSL++ES ++T +DL+ W + L DEKI L Q +
Sbjct: 33 RITVTAMCNMDFSRFPLDSQTCSLELESYAYTDEDLMLYWKNGNESLKTDEKISLSQFLI 92
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
K T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 93 QKFHTTSRLAFYSSTGWYNRLYISFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 152
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 153 PARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 190
Score = 43 (20.2 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 196 FVFLSVLEYAAVN 208
>MGI|MGI:95624 [details] [associations]
symbol:Gabrg3 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 3" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0042493 "response to drug" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005440 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623 PROSITE:PS00236
MGI:MGI:95624 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 KO:K05186 CTD:2567 eggNOG:NOG300758
OMA:RGRIHID EMBL:X59300 EMBL:AC102098 EMBL:AC102129 EMBL:AC116146
EMBL:AC134844 EMBL:AC156610 EMBL:AC158550 EMBL:CH466599
IPI:IPI00118860 PIR:S16915 RefSeq:NP_032100.2 UniGene:Mm.434343
ProteinModelPortal:P27681 STRING:P27681 PhosphoSite:P27681
PRIDE:P27681 Ensembl:ENSMUST00000068911 GeneID:14407 KEGG:mmu:14407
UCSC:uc009hdz.1 InParanoid:P27681 BindingDB:P27681
ChEMBL:CHEMBL4236 NextBio:285977 Genevestigator:P27681
GermOnline:ENSMUSG00000055026 Uniprot:P27681
Length = 467
Score = 260 (96.6 bits), Expect = 8.2e-28, Sum P(3) = 8.2e-28
Identities = 52/160 (32%), Positives = 79/160 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI-ELPQLQL 64
RLT+ C + +P D C L S + +++I++W A D+K L Q
Sbjct: 164 RLTINAECQLQLHNFPMDAHACPLTFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDF 223
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ + S G++ + + F L RR+GY+ TYIP L V++SWVSFWIK +A P
Sbjct: 224 MGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATP 283
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR ++ SLP VSY+ A+D F++ C
Sbjct: 284 ARTTLGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVC 323
Score = 179 (68.1 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 44/139 (31%), Positives = 68/139 (48%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+ +L N +L E YDK P +PT++ + V + + +M Y DIFFAQ
Sbjct: 45 TDVTLILNKLLRE----YDKKLRPDIGIKPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQ 100
Query: 227 TWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKT 286
TW D RLR N T + L + + +W PD+ F+N+K +T PN + ++ D
Sbjct: 101 TWTDSRLRF--NSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGK 158
Query: 287 ILYMVKFVFMALMEYCLVN 305
ILY ++ A + L N
Sbjct: 159 ILYTLRLTINAECQLQLHN 177
Score = 73 (30.8 bits), Expect = 8.2e-28, Sum P(3) = 8.2e-28
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 365 IDRFSRVFFPVLFAILNCTYWI 386
+D +SRVFFP F + N YW+
Sbjct: 441 LDSYSRVFFPTSFLLFNLVYWV 462
Score = 47 (21.6 bits), Expect = 8.2e-28, Sum P(3) = 8.2e-28
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 286 TILYMVKFVFMALMEYCLVN 305
T+ ++ FVF ALMEY +N
Sbjct: 321 TVCFL--FVFAALMEYATLN 338
>RGD|621735 [details] [associations]
symbol:Gabrg3 "gamma-aminobutyric acid (GABA) A receptor, gamma
3" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA;TAS]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0042493 "response to drug" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005440 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623 PROSITE:PS00236
RGD:621735 GO:GO:0005886 GO:GO:0042493 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 KO:K05186 CTD:2567 eggNOG:NOG300758
OMA:RGRIHID EMBL:M81142 EMBL:X63324 IPI:IPI00200810 PIR:S19317
RefSeq:NP_077346.3 UniGene:Rn.10369 ProteinModelPortal:P28473
SMR:P28473 Ensembl:ENSRNOT00000019971 GeneID:79211 KEGG:rno:79211
UCSC:RGD:621735 InParanoid:P28473 BindingDB:P28473 ChEMBL:CHEMBL336
NextBio:614604 ArrayExpress:P28473 Genevestigator:P28473
GermOnline:ENSRNOG00000014862 Uniprot:P28473
Length = 467
Score = 260 (96.6 bits), Expect = 8.2e-28, Sum P(3) = 8.2e-28
Identities = 52/160 (32%), Positives = 79/160 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI-ELPQLQL 64
RLT+ C + +P D C L S + +++I++W A D+K L Q
Sbjct: 164 RLTINAECQLQLHNFPMDAHACPLTFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDF 223
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ + S G++ + + F L RR+GY+ TYIP L V++SWVSFWIK +A P
Sbjct: 224 MGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATP 283
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR ++ SLP VSY+ A+D F++ C
Sbjct: 284 ARTTLGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVC 323
Score = 179 (68.1 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 44/139 (31%), Positives = 68/139 (48%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+ +L N +L E YDK P +PT++ + V + + +M Y DIFFAQ
Sbjct: 45 TDVTLILNKLLRE----YDKKLRPDIGIKPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQ 100
Query: 227 TWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKT 286
TW D RLR N T + L + + +W PD+ F+N+K +T PN + ++ D
Sbjct: 101 TWTDSRLRF--NSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGK 158
Query: 287 ILYMVKFVFMALMEYCLVN 305
ILY ++ A + L N
Sbjct: 159 ILYTLRLTINAECQLQLHN 177
Score = 73 (30.8 bits), Expect = 8.2e-28, Sum P(3) = 8.2e-28
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 365 IDRFSRVFFPVLFAILNCTYWI 386
+D +SRVFFP F + N YW+
Sbjct: 441 LDSYSRVFFPTSFLLFNLVYWV 462
Score = 47 (21.6 bits), Expect = 8.2e-28, Sum P(3) = 8.2e-28
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 286 TILYMVKFVFMALMEYCLVN 305
T+ ++ FVF ALMEY +N
Sbjct: 321 TVCFL--FVFAALMEYATLN 338
>FB|FBgn0036727 [details] [associations]
symbol:CG7589 species:7227 "Drosophila melanogaster"
[GO:0016933 "extracellular-glycine-gated ion channel activity"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0006911
EMBL:AE014296 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GeneTree:ENSGT00540000070314 InterPro:IPR015680
PANTHER:PTHR18945:SF26 EMBL:BT022869 EMBL:BT022900
RefSeq:NP_648984.2 UniGene:Dm.27164 SMR:Q9VVH4
EnsemblMetazoa:FBtr0075221 EnsemblMetazoa:FBtr0333690 GeneID:39949
KEGG:dme:Dmel_CG7589 UCSC:CG7589-RA FlyBase:FBgn0036727
InParanoid:Q9VVH4 OMA:ASPPRIM OrthoDB:EOG4GMSC8 GenomeRNAi:39949
NextBio:816227 Uniprot:Q9VVH4
Length = 509
Score = 266 (98.7 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 55/169 (32%), Positives = 87/169 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+ L C MNF +P D Q CS +ES + T DLI +W+P P++ D ++ L + +
Sbjct: 170 RMQASLYCWMNFQKFPFDQQFCSTVLESWMYNTSDLILEWEPHTPISFDPEMRLTEYNMA 229
Query: 66 K---NKT---ADCSQVYS---TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSF 116
+ N T +D + GN++ L LKR +G+YL Y+P+ +IV +SWVSF
Sbjct: 230 QFWHNTTIVQSDGDNLRHGAFAGNYSSLSFTVNLKREIGFYLLDYYLPSMMIVAISWVSF 289
Query: 117 WIKPEAAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACT 165
W++ +A+P R + +LP VSY+K + + CT
Sbjct: 290 WLQADASPPRIMLGTSTMLSFITLSSSQSKNLPKVSYIKVSEVWFLGCT 338
Score = 62 (26.9 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 365 IDRFSRVFFPVLFAILNCTYW 385
IDR SR FP +F N YW
Sbjct: 483 IDRRSRFLFPAMFLAFNALYW 503
Score = 40 (19.1 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 268 TFQTMTIPNHYVWLYKDKTILYMVKFV-FMAL 298
TF TMT +W+ + L+ F+ F AL
Sbjct: 470 TFTTMTPQEIAMWIDRRSRFLFPAMFLAFNAL 501
Score = 38 (18.4 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 293 FVFMALMEYCLVNIV 307
F+F +L+E+ VN +
Sbjct: 340 FIFGSLVEFAFVNTI 354
>ZFIN|ZDB-GENE-080303-26 [details] [associations]
symbol:zgc:171544 "zgc:171544" species:7955 "Danio
rerio" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008100 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236
ZFIN:ZDB-GENE-080303-26 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571 EMBL:AL732488
EMBL:BX248124 EMBL:CT573003 IPI:IPI00886548
ProteinModelPortal:F1QZB5 Ensembl:ENSDART00000076322 OMA:GSVANTE
Bgee:F1QZB5 Uniprot:F1QZB5
Length = 447
Score = 267 (99.0 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 52/161 (32%), Positives = 87/161 (54%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T ++C+M+ YP D Q C LQ+ES + D++F W ++ + ++L Q L
Sbjct: 147 RITTTVACSMDLTKYPMDRQTCMLQLESWGYNVKDVVFYWTRGNQSVSGLDHLQLAQYTL 206
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ T++ VY TGN+ L F LKR + Y++ TY+P+ +V++SWVSFWI + P
Sbjct: 207 EDHYTSESEAVYETGNYPKLIFHFKLKRSILYFILETYVPSSALVVLSWVSFWISQSSVP 266
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVS-YLKAVDAFMSAC 164
AR ++ SLP + ++KA+D ++ C
Sbjct: 267 ARICIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGIC 307
Score = 140 (54.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 43/140 (30%), Positives = 71/140 (50%)
Query: 160 FMSACTVSSTSLTFNDILPED-PKL---YDK-MRPPKKEGQPTIVYFHVTVMGLDSIDEN 214
F+S S + T +ILP KL Y+K +RP G P V + + +D+I E
Sbjct: 15 FISRIMDGSVANT-EEILPPTIQKLMKGYNKYLRPFFGNG-PVTVGMSLDIASIDTISEI 72
Query: 215 SMTYAADIFFAQTWKDHRLRLPEN--MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTM 272
+M Y A IF Q W D RL N ++ + RL+E+ +W PD+F ++K +
Sbjct: 73 NMDYTATIFLRQRWTDERLCFDGNKSLSLDGRLVEL-----LWVPDTFIVDSKKSFLHDI 127
Query: 273 TIPNHYVWLYKDKTILYMVK 292
T+ N + ++ + T+LY ++
Sbjct: 128 TVENRLIRIFPNGTVLYALR 147
Score = 71 (30.1 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFAEF 391
ID +SR+ FP+ F I+N YW + F
Sbjct: 421 IDNYSRLTFPLSFVIINLLYWTYYLYF 447
>UNIPROTKB|E1BQL4 [details] [associations]
symbol:GABRD "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 OMA:EYTMTVF
GeneTree:ENSGT00630000089571 EMBL:AADN02040874 IPI:IPI00599008
Ensembl:ENSGALT00000001958 Uniprot:E1BQL4
Length = 430
Score = 264 (98.0 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 53/163 (32%), Positives = 85/163 (52%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMP-LAVDEKIELPQLQL 64
R+T ++C M+ YP D QEC L +ES ++++D+++ W + +K++L Q +
Sbjct: 133 RITSTVACDMDLSKYPMDEQECMLDLESYGYSSEDIVYHWSENQDEIHGLDKLQLAQFTI 192
Query: 65 VKNK-TADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T + S G F L + F L+R G Y+ +Y+P+ L+V MSWVSFWI A
Sbjct: 193 TNYQFTTELMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYVPSILLVAMSWVSFWISQSAV 252
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR +++SLP S +KA+D + C V
Sbjct: 253 PARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYV 295
Score = 160 (61.4 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 37/111 (33%), Positives = 56/111 (50%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTS 241
K Y + P G P V + V +D I E +M Y +F Q+W+D RL N T+
Sbjct: 25 KGYARNFRPGIGGPPVNVALAIEVASIDHISEVNMEYTMTVFLHQSWRDDRLSY--NHTN 82
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
E L+ ++ +W PD+F NAK+ F +T+ N + L D ILY ++
Sbjct: 83 ETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIR 133
Score = 64 (27.6 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID ++R FP FA +N YW+ +
Sbjct: 393 IDIYARAVFPAAFAAVNVIYWVAY 416
Score = 37 (18.1 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+EY +
Sbjct: 296 FVFAALVEYAFAH 308
>UNIPROTKB|A2VE38 [details] [associations]
symbol:GABRD "Gamma-aminobutyric acid (GABA) A receptor,
delta" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008098 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01722 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2563 eggNOG:NOG308574
KO:K05184 OMA:EYTMTVF OrthoDB:EOG4H9XKN
GeneTree:ENSGT00630000089571 EMBL:DAAA02043224 EMBL:BC133557
IPI:IPI00710785 RefSeq:NP_001075184.1 UniGene:Bt.25568
Ensembl:ENSBTAT00000011434 GeneID:508711 KEGG:bta:508711
InParanoid:A2VE38 NextBio:20868645 Uniprot:A2VE38
Length = 450
Score = 271 (100.5 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 70/247 (28%), Positives = 116/247 (46%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T ++C M+ YP D QEC L +ES ++++D+++ W + E +D K++L Q
Sbjct: 156 RITSTVACDMDLAKYPMDEQECMLHLESYGYSSEDIVYYWSENQEQIHGLD-KLQLAQFT 214
Query: 64 LVKNK-TADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ + T + S G F L + F L+R G Y+ +Y+P+ L+V MSWVSFWI A
Sbjct: 215 ITSYRFTTELMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAA 274
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPK 182
PAR +++SLP S +KA+D + C V +
Sbjct: 275 VPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFNA 334
Query: 183 LYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
Y K + K + + + + ++I S++ AA + RLP N+
Sbjct: 335 DYRKKQKAKAKAKVKVKEQRAEMDVKNAIVLFSLS-AAGVTQELAVSRRPCRLPGNLMGS 393
Query: 243 YRLLEVD 249
YR +EV+
Sbjct: 394 YRSVEVE 400
Score = 155 (59.6 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 34/100 (34%), Positives = 53/100 (53%)
Query: 194 GQPTI-VYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLK 252
G P + V + V +D I E +M Y +F Q+W+D RL N T+E L+ ++
Sbjct: 59 GGPAVNVALAIEVASIDHISEVNMEYTMTVFLHQSWRDSRLSY--NHTNETLGLDSRFVD 116
Query: 253 NMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+W PD+F NAK+ F +T+ N + L D ILY ++
Sbjct: 117 KLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIR 156
Score = 60 (26.2 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID ++R FP FA +N YW +
Sbjct: 425 IDIYARAVFPAAFAAVNVIYWAAY 448
Score = 37 (18.1 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+EY +
Sbjct: 319 FVFAALVEYAFAH 331
>UNIPROTKB|Q99928 [details] [associations]
symbol:GABRG3 "Gamma-aminobutyric acid receptor subunit
gamma-3" species:9606 "Homo sapiens" [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=NAS;TAS] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_15518 InterPro:IPR005437
InterPro:IPR005440 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PRINTS:PR01623 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0042493 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707 GO:GO:0005254
HOGENOM:HOG000231337 HOVERGEN:HBG051707 KO:K05186 EMBL:S82769
EMBL:AF269144 EMBL:AF269135 EMBL:AF269136 EMBL:AF269137
EMBL:AF269138 EMBL:AF269139 EMBL:AF269140 EMBL:AF269141
EMBL:AF269142 EMBL:AF269143 EMBL:AH009226 IPI:IPI00294459
RefSeq:NP_150092.2 UniGene:Hs.569475 ProteinModelPortal:Q99928
SMR:Q99928 STRING:Q99928 PhosphoSite:Q99928 DMDM:13959689
PRIDE:Q99928 Ensembl:ENST00000333743 GeneID:2567 KEGG:hsa:2567
UCSC:uc001zbf.3 CTD:2567 GeneCards:GC15P027216 H-InvDB:HIX0026811
HGNC:HGNC:4088 MIM:600233 neXtProt:NX_Q99928 PharmGKB:PA28502
eggNOG:NOG300758 InParanoid:Q99928 OMA:RGRIHID PhylomeDB:Q99928
BindingDB:Q99928 ChEMBL:CHEMBL2739 GenomeRNAi:2567 NextBio:10153
ArrayExpress:Q99928 Bgee:Q99928 CleanEx:HS_GABRG3
Genevestigator:Q99928 Uniprot:Q99928
Length = 467
Score = 258 (95.9 bits), Expect = 1.8e-27, Sum P(3) = 1.8e-27
Identities = 52/160 (32%), Positives = 79/160 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI-ELPQLQL 64
RLT+ C + +P D C L S + +++I++W A D+K L Q
Sbjct: 164 RLTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDF 223
Query: 65 VKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+ + S G++ + + F L RR+GY+ TYIP L V++SWVSFWIK +A P
Sbjct: 224 MGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATP 283
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR ++ SLP VSY+ A+D F++ C
Sbjct: 284 ARTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVC 323
Score = 185 (70.2 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 45/148 (30%), Positives = 71/148 (47%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+ +L N +L E YDK P +PT++ + V + + +M Y DIFFAQ
Sbjct: 45 TDVTLILNKLLRE----YDKKLRPDIGIKPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQ 100
Query: 227 TWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKT 286
TW D RLR N T + L + + +W PD+ F+N+K +T PN + ++ D
Sbjct: 101 TWTDSRLRF--NSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGK 158
Query: 287 ILYMVKFVFMALMEYCLVNIVLGDSDLP 314
ILY ++ A + L N + + P
Sbjct: 159 ILYTLRLTINAECQLQLHNFPMDEHSCP 186
Score = 75 (31.5 bits), Expect = 1.8e-27, Sum P(3) = 1.8e-27
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 363 INIDRFSRVFFPVLFAILNCTYWI 386
+ +D +SRVFFP F + N YW+
Sbjct: 439 LELDSYSRVFFPTSFLLFNLVYWV 462
Score = 47 (21.6 bits), Expect = 1.8e-27, Sum P(3) = 1.8e-27
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 286 TILYMVKFVFMALMEYCLVN 305
T+ ++ FVF ALMEY +N
Sbjct: 321 TVCFL--FVFAALMEYATLN 338
>UNIPROTKB|F1NHG7 [details] [associations]
symbol:GABRR3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 EMBL:AADN02032647 EMBL:AADN02032648
EMBL:AADN02032649 EMBL:AADN02032650 EMBL:AADN02032651
IPI:IPI00576866 Ensembl:ENSGALT00000023288 OMA:ASGMYNI
Uniprot:F1NHG7
Length = 427
Score = 262 (97.3 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
Identities = 56/159 (35%), Positives = 85/159 (53%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP-EMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++ DDL+ W L+ DE I L Q +
Sbjct: 135 RITVSAMCFMDFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNESLSTDEHISLSQFFI 194
Query: 65 VKNKTADCSQVYST--GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ + YS+ G + L + F L+R + +++ +Y P L+V++SWVSFWI A
Sbjct: 195 EEFSASSGLAFYSSTAGWYNRLFINFALRRHIFFFVLQSYFPAMLMVMLSWVSFWIDRRA 254
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 255 VPARVSLGITTVLTMSTIITGVSASMPQVSYIKAVDVYL 293
Score = 127 (49.8 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 34/110 (30%), Positives = 54/110 (49%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRL--RLPEN--MTSEYRLLEVD 249
G P V V V +DSI E M + ++ WKD RL R +N MT + RL+
Sbjct: 37 GSPIPVGIDVQVESIDSISEVDMDFTMTLYLRHYWKDERLSFRSTKNKSMTFDGRLI--- 93
Query: 250 WLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALM 299
K +W PD FF ++K T+ N + +Y D +L+ ++ + ++ M
Sbjct: 94 --KKIWVPDVFFVHSKRSFIHDTTVENVMLRVYPDGNVLFSLRRITVSAM 141
Score = 62 (26.9 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID +SR+ FP ++ + N YW ++
Sbjct: 403 IDTYSRIIFPSVYIVFNFFYWGLY 426
Score = 42 (19.8 bits), Expect = 2.3e-27, Sum P(3) = 2.3e-27
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 299 FVFLSVIEYAAVN 311
>UNIPROTKB|F1S3S9 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:HYFTSNK EMBL:CU856397
EMBL:FP312872 Ensembl:ENSSSCT00000009639 Uniprot:F1S3S9
Length = 442
Score = 255 (94.8 bits), Expect = 2.7e-27, Sum P(3) = 2.7e-27
Identities = 53/163 (32%), Positives = 82/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIELPQLQL 64
RLT+ C + +P D C L+ S + +++ ++W P + +A + L Q
Sbjct: 158 RLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAF 217
Query: 65 VK-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
V T + S S G++ + + F L RR+GY+ TYIP L V++SWVSFWI +A
Sbjct: 218 VGLRNTTEISHTIS-GDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAV 276
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 277 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 319
Score = 174 (66.3 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 39/131 (29%), Positives = 64/131 (48%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +PT++ V V + +D +M Y DI FAQTW D RL+ N T +
Sbjct: 52 YDNKLRPDIGVRPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFDSRLKF--NSTMKV 109
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
+L + + +W PD+FF+N++ +T PN + ++ D +LY ++ A L
Sbjct: 110 LMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLRLTINAECYLQL 169
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 170 HNFPMDEHSCP 180
Score = 80 (33.2 bits), Expect = 2.7e-27, Sum P(3) = 2.7e-27
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 365 IDRFSRVFFPVLFAILNCTYWI 386
ID +SR+FFP FA+ N YW+
Sbjct: 416 IDSYSRIFFPTAFALFNLVYWV 437
Score = 44 (20.5 bits), Expect = 2.7e-27, Sum P(3) = 2.7e-27
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARLLTGQPMIPPN 346
FVF ALMEY ++ + E ++K A ++ L G +IP N
Sbjct: 320 FVFAALMEYGTLHYFTSNKKAKTTRERKPKNK-----ASMSSGLHPGSTLIPMN 368
>UNIPROTKB|Q9PSA4 [details] [associations]
symbol:GABRR1 "Gamma-aminobutyric acid type C receptor RHO
1 subunit" species:9031 "Gallus gallus" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 HOVERGEN:HBG051707 eggNOG:NOG77438
HOGENOM:HOG000231335 HSSP:P23415 GeneTree:ENSGT00630000089571
OrthoDB:EOG4RJG1G EMBL:AADN02002380 EMBL:AADN02002378
EMBL:AADN02002379 IPI:IPI00818489 Ensembl:ENSGALT00000037181
InParanoid:Q9PSA4 Uniprot:Q9PSA4
Length = 292
Score = 278 (102.9 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 61/158 (38%), Positives = 87/158 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C M+F +P DTQ CSL++ES ++T DDL+ W + L DE+I L Q +
Sbjct: 34 RVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKNGNDSLKTDERISLSQFLI 93
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T YS TG + L + F L+R + ++L TY P L+V++SWVSFWI A
Sbjct: 94 QEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 153
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR AS+P VSY+KAVD ++
Sbjct: 154 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYL 191
Score = 43 (20.2 bits), Expect = 2.8e-27, Sum P(2) = 2.8e-27
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 197 FVFLSVLEYAAVN 209
>ZFIN|ZDB-GENE-080722-20 [details] [associations]
symbol:zgc:194845 "zgc:194845" species:7955 "Danio
rerio" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 ZFIN:ZDB-GENE-080722-20
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 HOVERGEN:HBG051707
eggNOG:NOG77438 HOGENOM:HOG000231335 GeneTree:ENSGT00630000089571
KO:K05190 OrthoDB:EOG41G343 EMBL:CR376845 EMBL:CR925774
EMBL:BC163099 EMBL:BC163103 IPI:IPI00502511 RefSeq:NP_001122232.1
UniGene:Dr.116763 Ensembl:ENSDART00000048430 GeneID:570876
KEGG:dre:570876 OMA:YLRHYWQ NextBio:20890333 Uniprot:B3DIE5
Length = 472
Score = 262 (97.3 bits), Expect = 2.9e-27, Sum P(3) = 2.9e-27
Identities = 59/160 (36%), Positives = 89/160 (55%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T+ C+M+F +P DTQ CSL++ES ++ +DL+ W + L DE I L Q +
Sbjct: 183 RITVTALCSMDFSRFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRTDE-IALSQFFI 241
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ + YS TG + L + F+L+R + +++ TY PT L+V++SWVSFWI A
Sbjct: 242 EEFHPSYGLAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRAV 301
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSA 163
PAR AS+P VSY+KAVD ++ A
Sbjct: 302 PARVSLGITTVLTMSTIITGVSASMPQVSYVKAVDIYLWA 341
Score = 129 (50.5 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 33/112 (29%), Positives = 52/112 (46%)
Query: 187 MRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLL 246
MRP G V V V +D I E +M + ++ W+D RL P + ++ R
Sbjct: 80 MRPGFG-GSAIPVGIDVQVESIDGISEVNMDFTMTLYLRHYWQDDRLAFPSS-NNKSRTF 137
Query: 247 EVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
+ +K +W PD FF ++K T+ N + ++ D ILY V+ AL
Sbjct: 138 DARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVFPDGNILYSVRITVTAL 189
Score = 67 (28.6 bits), Expect = 2.9e-27, Sum P(3) = 2.9e-27
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID +SR+ FP+ + + N YW +++
Sbjct: 448 IDSYSRILFPLAYLLFNIIYWCIYS 472
Score = 42 (19.8 bits), Expect = 2.9e-27, Sum P(3) = 2.9e-27
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF++++EY VN
Sbjct: 345 FVFLSVIEYAAVN 357
>UNIPROTKB|F1NES8 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:AADN02013490 IPI:IPI00683388
Ensembl:ENSGALT00000027026 Uniprot:F1NES8
Length = 430
Score = 250 (93.1 bits), Expect = 2.9e-27, Sum P(3) = 2.9e-27
Identities = 52/163 (31%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT++ C + +P DT C L S + ++++++W + V ++ Q
Sbjct: 139 RLTIEAECLLQLQNFPMDTHSCPLVFSSYGYPREEIVYRWR-RYSIEVSDQRTWRLYQFD 197
Query: 66 KNKTADCSQVYSTG--NFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ S+V TG + + V F L RR+GY+ TYIP L V++SWVSFWIK ++
Sbjct: 198 FTGLRNTSEVLRTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDST 257
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR S+ LP VSY+ A+D F+S C +
Sbjct: 258 PARTSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFI 300
Score = 176 (67.0 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 41/125 (32%), Positives = 62/125 (49%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTS 241
K YD P +PT + + V + + M Y DIFFAQTW D RLR N T
Sbjct: 31 KNYDNKLRPDIGIKPTFIDVDIYVNSIGPVSVIQMEYTIDIFFAQTWYDRRLRF--NSTL 88
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEY 301
+ L + + +W PD+FF+N+K +T PN + ++ D +LY ++ A E
Sbjct: 89 KALTLNTNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTLRLTIEA--E- 145
Query: 302 CLVNI 306
CL+ +
Sbjct: 146 CLLQL 150
Score = 77 (32.2 bits), Expect = 2.9e-27, Sum P(3) = 2.9e-27
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D +SRVFFP F + N YWI +
Sbjct: 404 LDSYSRVFFPTAFLLFNIVYWIAY 427
Score = 55 (24.4 bits), Expect = 2.9e-27, Sum P(3) = 2.9e-27
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPE 318
FVF ALMEY +N ++G+ KP E
Sbjct: 301 FVFAALMEYATLNYLVGNK---KPLE 323
>UNIPROTKB|G1K310 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:AADN02013490
Ensembl:ENSGALT00000011777 OMA:FFCCIED Uniprot:G1K310
Length = 439
Score = 250 (93.1 bits), Expect = 3.9e-27, Sum P(3) = 3.9e-27
Identities = 52/163 (31%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT++ C + +P DT C L S + ++++++W + V ++ Q
Sbjct: 148 RLTIEAECLLQLQNFPMDTHSCPLVFSSYGYPREEIVYRWR-RYSIEVSDQRTWRLYQFD 206
Query: 66 KNKTADCSQVYSTG--NFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ S+V TG + + V F L RR+GY+ TYIP L V++SWVSFWIK ++
Sbjct: 207 FTGLRNTSEVLRTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDST 266
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR S+ LP VSY+ A+D F+S C +
Sbjct: 267 PARTSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFI 309
Score = 176 (67.0 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 41/125 (32%), Positives = 62/125 (49%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTS 241
K YD P +PT + + V + + M Y DIFFAQTW D RLR N T
Sbjct: 40 KNYDNKLRPDIGIKPTFIDVDIYVNSIGPVSVIQMEYTIDIFFAQTWYDRRLRF--NSTL 97
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEY 301
+ L + + +W PD+FF+N+K +T PN + ++ D +LY ++ A E
Sbjct: 98 KALTLNTNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTLRLTIEA--E- 154
Query: 302 CLVNI 306
CL+ +
Sbjct: 155 CLLQL 159
Score = 77 (32.2 bits), Expect = 3.9e-27, Sum P(3) = 3.9e-27
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D +SRVFFP F + N YWI +
Sbjct: 413 LDSYSRVFFPTAFLLFNIVYWIAY 436
Score = 55 (24.4 bits), Expect = 3.9e-27, Sum P(3) = 3.9e-27
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPE 318
FVF ALMEY +N ++G+ KP E
Sbjct: 310 FVFAALMEYATLNYLVGNK---KPLE 332
>UNIPROTKB|P34904 [details] [associations]
symbol:GABRG4 "Gamma-aminobutyric acid receptor subunit
gamma-4" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 CTD:2564 EMBL:X73533 IPI:IPI00595504 PIR:S38296
RefSeq:NP_990576.1 UniGene:Gga.692 ProteinModelPortal:P34904
GeneID:396173 KEGG:gga:396173 InParanoid:P34904 NextBio:20816227
Uniprot:P34904
Length = 457
Score = 250 (93.1 bits), Expect = 6.3e-27, Sum P(3) = 6.3e-27
Identities = 52/163 (31%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT++ C + +P DT C L S + ++++++W + V ++ Q
Sbjct: 166 RLTIEAECLLQLQNFPMDTHSCPLVFSSYGYPREEIVYRWR-RYSIEVSDQRTWRLYQFD 224
Query: 66 KNKTADCSQVYSTG--NFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ S+V TG + + V F L RR+GY+ TYIP L V++SWVSFWIK ++
Sbjct: 225 FTGLRNTSEVLRTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWIKRDST 284
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR S+ LP VSY+ A+D F+S C +
Sbjct: 285 PARTSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFI 327
Score = 176 (67.0 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 41/125 (32%), Positives = 62/125 (49%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTS 241
K YD P +PT + + V + + M Y DIFFAQTW D RLR N T
Sbjct: 58 KNYDNKLRPDIGIKPTFIDVDIYVNSIGPVSVIQMEYTIDIFFAQTWYDRRLRF--NSTL 115
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEY 301
+ L + + +W PD+FF+N+K +T PN + ++ D +LY ++ A E
Sbjct: 116 KALTLNTNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTLRLTIEA--E- 172
Query: 302 CLVNI 306
CL+ +
Sbjct: 173 CLLQL 177
Score = 77 (32.2 bits), Expect = 6.3e-27, Sum P(3) = 6.3e-27
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D +SRVFFP F + N YWI +
Sbjct: 431 LDSYSRVFFPTAFLLFNIVYWIAY 454
Score = 55 (24.4 bits), Expect = 6.3e-27, Sum P(3) = 6.3e-27
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPE 318
FVF ALMEY +N ++G+ KP E
Sbjct: 328 FVFAALMEYATLNYLVGNK---KPLE 350
>UNIPROTKB|Q7LZ70 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 HSSP:P23415 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:AC147646 IPI:IPI00600373
PIR:JH0824 RefSeq:XP_420725.2 UniGene:Gga.5062
Ensembl:ENSGALT00000022976 GeneID:422771 KEGG:gga:422771
InParanoid:Q7LZ70 NextBio:20825358 Uniprot:Q7LZ70
Length = 464
Score = 252 (93.8 bits), Expect = 9.7e-27, Sum P(3) = 9.7e-27
Identities = 53/163 (32%), Positives = 79/163 (48%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI-ELPQLQL 64
RLT+ C + +P D C L+ S + +++ ++W D K L Q
Sbjct: 177 RLTINAECYLQLHNFPMDEHSCPLEFSSYGYPRNEIEYKWKKTSVEVADPKYWRLYQFAF 236
Query: 65 VK-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
V T + S S G++ + + F L RR+GY+ TYIP L V++SWVSFWI +A
Sbjct: 237 VGLRNTTEISHTLS-GDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAV 295
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 296 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 338
Score = 163 (62.4 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 37/131 (28%), Positives = 63/131 (48%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P + T++ V V + +D +M Y DI FAQTW D RL+ N + +
Sbjct: 71 YDNKLRPDIGVRTTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWYDSRLKF--NSSMKV 128
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
+L + + +W PD+FF+N++ +T PN + ++ D +LY ++ A L
Sbjct: 129 LMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLRLTINAECYLQL 188
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 189 HNFPMDEHSCP 199
Score = 81 (33.6 bits), Expect = 9.7e-27, Sum P(3) = 9.7e-27
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 365 IDRFSRVFFPVLFAILNCTYWI 386
ID +SR+FFP FA+ N YWI
Sbjct: 438 IDSYSRIFFPTAFALFNLVYWI 459
Score = 46 (21.3 bits), Expect = 9.7e-27, Sum P(3) = 9.7e-27
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 293 FVFMALMEYCLVNIVL----GDSDLPKPPEPAKQDKIFELAAKENARLL 337
FVF ALMEY ++ GD K +P K K +A + + L+
Sbjct: 339 FVFAALMEYGTLHYFTSNRKGDKGKDKKAKP-KPSKPSAIAVRPGSTLI 386
>UNIPROTKB|Q8N1C3 [details] [associations]
symbol:GABRG1 "Gamma-aminobutyric acid receptor subunit
gamma-1" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0043235 "receptor complex" evidence=IEA] [GO:0050811 "GABA
receptor binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0005886 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 EMBL:CH471069 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 EMBL:AK122845 EMBL:CR933628
EMBL:BC031087 IPI:IPI00166138 RefSeq:NP_775807.2 UniGene:Hs.375051
ProteinModelPortal:Q8N1C3 SMR:Q8N1C3 STRING:Q8N1C3
PhosphoSite:Q8N1C3 DMDM:209572630 PRIDE:Q8N1C3 DNASU:2565
Ensembl:ENST00000295452 GeneID:2565 KEGG:hsa:2565 UCSC:uc003gxb.3
CTD:2565 GeneCards:GC04M045953 HGNC:HGNC:4086 HPA:HPA035622
MIM:137166 neXtProt:NX_Q8N1C3 PharmGKB:PA28500 InParanoid:Q8N1C3
KO:K05186 OMA:HYFTSNK OrthoDB:EOG44BB25 PhylomeDB:Q8N1C3
BindingDB:Q8N1C3 ChEMBL:CHEMBL4044 GenomeRNAi:2565 NextBio:10141
ArrayExpress:Q8N1C3 Bgee:Q8N1C3 CleanEx:HS_GABRG1
Genevestigator:Q8N1C3 GermOnline:ENSG00000163285 Uniprot:Q8N1C3
Length = 465
Score = 252 (93.8 bits), Expect = 9.9e-27, Sum P(3) = 9.9e-27
Identities = 53/164 (32%), Positives = 84/164 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIELPQLQL 64
RLT+ C + +P D C L+ S + +++ ++W P + +A + L Q
Sbjct: 181 RLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAF 240
Query: 65 V--KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
V +N T + + S G++ + + F L RR+GY+ TYIP L V++SWVSFWI +A
Sbjct: 241 VGLRNST-EITHTIS-GDYVIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDA 298
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 299 VPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 342
Score = 174 (66.3 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 39/131 (29%), Positives = 64/131 (48%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +PT++ V V + +D +M Y DI FAQTW D RL+ N T +
Sbjct: 75 YDNKLRPDIGVRPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFDSRLKF--NSTMKV 132
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
+L + + +W PD+FF+N++ +T PN + ++ D +LY ++ A L
Sbjct: 133 LMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLRLTINAECYLQL 192
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 193 HNFPMDEHSCP 203
Score = 80 (33.2 bits), Expect = 9.9e-27, Sum P(3) = 9.9e-27
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 365 IDRFSRVFFPVLFAILNCTYWI 386
ID +SR+FFP FA+ N YW+
Sbjct: 439 IDSYSRIFFPTAFALFNLVYWV 460
Score = 47 (21.6 bits), Expect = 9.9e-27, Sum P(3) = 9.9e-27
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARLLTGQPMIPPNH 347
FVF ALMEY ++ + + + A +D+ + A L G +IP N+
Sbjct: 343 FVFAALMEYGTLHYFTSN----QKGKTATKDRKLKNKASMTPGLHPGSTLIPMNN 393
>UNIPROTKB|F1PHI6 [details] [associations]
symbol:GABRG3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005440 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
Pfam:PF02932 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623
GO:GO:0016021 GO:GO:0005886 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:AAEX03002173
Ensembl:ENSCAFT00000015775 OMA:HERINLH Uniprot:F1PHI6
Length = 277
Score = 212 (79.7 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 43/127 (33%), Positives = 66/127 (51%)
Query: 39 DDLIFQWDPEMPLAVDEKI-ELPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYY 97
+++I++W A D+K L Q + + S G++ + + F L RR+GY+
Sbjct: 7 EEMIYRWRKNSVEAADQKSWRLYQFDFMGLRNTTEIVTTSAGDYVVMTIYFELSRRMGYF 66
Query: 98 LFHTYIPTCLIVIMSWVSFWIKPEAAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAV 157
TYIP L V++SWVSFWIK +A PAR ++ SLP VSY+ A+
Sbjct: 67 TIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTLSTIARNSLPRVSYVTAM 126
Query: 158 DAFMSAC 164
D F++ C
Sbjct: 127 DLFVTVC 133
Score = 75 (31.5 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 363 INIDRFSRVFFPVLFAILNCTYWI 386
+ +D +SRVFFP F + N YW+
Sbjct: 249 LELDSYSRVFFPTSFLLFNLVYWV 272
Score = 48 (22.0 bits), Expect = 1.0e-26, Sum P(3) = 1.0e-26
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 286 TILYMVKFVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKI 325
T+ ++ FVF ALMEY +N S KP K+ +
Sbjct: 131 TVCFL--FVFAALMEYATLNYY---SSCRKPTTTKKKTSL 165
>UNIPROTKB|E2RSQ0 [details] [associations]
symbol:GABRG2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030534 "adult behavior" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:GFTSQKS EMBL:AAEX03003042
Ensembl:ENSCAFT00000027292 NextBio:20862353 Uniprot:E2RSQ0
Length = 453
Score = 258 (95.9 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 54/163 (33%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI-ELPQLQL 64
RLT+ C + +P D C L+ S + +++++QW D + L Q
Sbjct: 161 RLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSF 220
Query: 65 VK-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
V T + + S G++ + V F L RR+GY+ TYIP LIV++SWVSFWI +A
Sbjct: 221 VGLRNTTEVVKTTS-GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV 279
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 280 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 322
Score = 180 (68.4 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +PT+++ + V + ++ +M Y DIFFAQTW D RL+ N T +
Sbjct: 55 YDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKF--NSTIKV 112
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
L + + +W PD+FF+N+K +T PN + ++ D +LY ++ A + L
Sbjct: 113 LRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQL 172
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 173 HNFPMDEHSCP 183
Score = 72 (30.4 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D ++R+FFP F + N YW+ +
Sbjct: 427 MDSYARIFFPTAFCLFNLVYWVSY 450
Score = 41 (19.5 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFEL 328
FVF AL+EY ++ + + K + K++ + +
Sbjct: 323 FVFSALVEYGTLHYFVSNRKPSKDKDKKKKNPLLRM 358
>UNIPROTKB|O14764 [details] [associations]
symbol:GABRD "Gamma-aminobutyric acid receptor subunit
delta" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 GO:GO:0005887 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0006810 GO:GO:0034707
GO:GO:0005254 Orphanet:307 HOVERGEN:HBG051707 HOGENOM:HOG000231335
EMBL:AF016917 EMBL:AL391845 EMBL:BC033801 IPI:IPI00375475
RefSeq:NP_000806.2 UniGene:Hs.113882 ProteinModelPortal:O14764
SMR:O14764 IntAct:O14764 MINT:MINT-1461496 STRING:O14764
PhosphoSite:O14764 PRIDE:O14764 DNASU:2563 Ensembl:ENST00000378585
GeneID:2563 KEGG:hsa:2563 UCSC:uc001aip.2 CTD:2563
GeneCards:GC01P001950 HGNC:HGNC:4084 MIM:137163 MIM:613060
neXtProt:NX_O14764 Orphanet:36387 Orphanet:1606 PharmGKB:PA28498
eggNOG:NOG308574 InParanoid:O14764 KO:K05184 OMA:EYTMTVF
OrthoDB:EOG4H9XKN PhylomeDB:O14764 BindingDB:O14764
ChEMBL:CHEMBL3591 GenomeRNAi:2563 NextBio:10127 Bgee:O14764
CleanEx:HS_GABRD Genevestigator:O14764 GermOnline:ENSG00000187730
Uniprot:O14764
Length = 452
Score = 262 (97.3 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 53/163 (32%), Positives = 87/163 (53%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T ++C M+ YP D QEC L +ES ++++D+++ W + + + +K++L Q +
Sbjct: 157 RITSTVACDMDLAKYPMDEQECMLDLESYGYSSEDIVYYWSESQEHIHGLDKLQLAQFTI 216
Query: 65 VKNK-TADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T + S G F L + F L+R G Y+ +Y+P+ L+V MSWVSFWI A
Sbjct: 217 TSYRFTTELMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAV 276
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR +++SLP S +KA+D + C V
Sbjct: 277 PARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYV 319
Score = 158 (60.7 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 34/99 (34%), Positives = 52/99 (52%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKN 253
G P V + V +D I E +M Y +F Q+W+D RL N T+E L+ ++
Sbjct: 61 GPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSY--NHTNETLGLDSRFVDK 118
Query: 254 MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+W PD+F NAK+ F +T+ N + L D ILY ++
Sbjct: 119 LWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIR 157
Score = 64 (27.6 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID ++R FP FA +N YW +A
Sbjct: 427 IDIYARAVFPAAFAAVNVIYWAAYA 451
Score = 37 (18.1 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+EY +
Sbjct: 320 FVFAALVEYAFAH 332
>UNIPROTKB|F1NID8 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 IPI:IPI00577501 EMBL:AADN02035879
Ensembl:ENSGALT00000002621 Uniprot:F1NID8
Length = 438
Score = 257 (95.5 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 53/163 (32%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT+ C + +P D C L+ S + +++I+QW + V + Q
Sbjct: 146 RLTIDAECQLQLHNFPMDAHSCPLEFSSYGYPREEIIYQWK-RSSVEVGDTRSWRLYQFS 204
Query: 66 KNKTADCSQVYST--GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ ++V T G++ + V F L RR+GY+ TYIP LIV++SWVSFWI +A
Sbjct: 205 FTGLRNTTEVVKTTSGDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV 264
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 265 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 307
Score = 178 (67.7 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 43/148 (29%), Positives = 71/148 (47%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
S +L N +L YD P +PT+++ + V + ++ +M Y DIFFAQ
Sbjct: 27 SDVTLILNGLLEG----YDNKLRPDIGVKPTVIHTDMYVNSIGPVNAINMEYTIDIFFAQ 82
Query: 227 TWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKT 286
TW D RL+ N T + L + + +W PD+FF+N+K +T PN + ++ D
Sbjct: 83 TWYDRRLKF--NSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGR 140
Query: 287 ILYMVKFVFMALMEYCLVNIVLGDSDLP 314
+LY ++ A + L N + P
Sbjct: 141 VLYTLRLTIDAECQLQLHNFPMDAHSCP 168
Score = 72 (30.4 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D ++R+FFP F + N YW+ +
Sbjct: 412 MDSYARIFFPTAFCLFNLVYWVSY 435
Score = 40 (19.1 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKI 325
FVF AL+EY ++ + + K + K++ +
Sbjct: 308 FVFSALVEYGTLHYFVSNRKPSKDKDKKKKNPV 340
>UNIPROTKB|E1C7Q7 [details] [associations]
symbol:E1C7Q7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
EMBL:AADN02046491 EMBL:AADN02046492 EMBL:AADN02046493
EMBL:AADN02046494 EMBL:AADN02046495 IPI:IPI00602664
ProteinModelPortal:E1C7Q7 Ensembl:ENSGALT00000011429 OMA:VKNPYHI
Uniprot:E1C7Q7
Length = 437
Score = 257 (95.5 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 52/162 (32%), Positives = 88/162 (54%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP--EMPLAVDEKIELPQLQ 63
R+T ++C+M+ YP D Q C+LQ+ES + +D++F W + +D ++L Q
Sbjct: 149 RITTTVACSMDLTKYPMDKQTCTLQLESWGYNINDVMFYWTRGNDSVRGLDT-LQLAQYT 207
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ + T+ VY TG + L F LKR + Y++ TY+P+ L+V++SWVSFWI +
Sbjct: 208 VEDHFTSVSEAVYETGRYPKLVFHFELKRNILYFILETYVPSILLVVLSWVSFWISQSSV 267
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVS-YLKAVDAFMSAC 164
PAR ++ SLP + ++KA+D ++ C
Sbjct: 268 PARICIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGIC 309
Score = 145 (56.1 bits), Expect = 9.8e-11, Sum P(3) = 9.8e-11
Identities = 34/113 (30%), Positives = 58/113 (51%)
Query: 182 KLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN--M 239
K Y+K P + P V + + +D+I E +M Y A IF Q W D RL N +
Sbjct: 42 KGYNKYLRPFFDNGPVSVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLCFDGNKSL 101
Query: 240 TSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+ + RL+E+ +W PD+F ++K +T+ N + +Y + T+LY ++
Sbjct: 102 SLDGRLVEM-----LWVPDTFIVDSKKSFLHDITVENRLIRIYPNGTVLYAIR 149
Score = 69 (29.3 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMFAEF 391
+ID ++R FP+ F I+N YW+ + F
Sbjct: 410 HIDNYARFSFPLSFIIINVFYWVYYLYF 437
Score = 42 (19.8 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 293 FVFMALMEYCLVNIVL----GDSDLPKP 316
F+F AL+EY + + ++PKP
Sbjct: 312 FIFGALLEYAVAHFCALHRPSSKEIPKP 339
>UNIPROTKB|F1M4V9 [details] [associations]
symbol:Gabrg2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR005437
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236
RGD:61966 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 IPI:IPI00950881 Ensembl:ENSRNOT00000065955
ArrayExpress:F1M4V9 Uniprot:F1M4V9
Length = 445
Score = 258 (95.9 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 54/163 (33%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI-ELPQLQL 64
RLT+ C + +P D C L+ S + +++++QW D + L Q
Sbjct: 161 RLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSF 220
Query: 65 VK-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
V T + + S G++ + V F L RR+GY+ TYIP LIV++SWVSFWI +A
Sbjct: 221 VGLRNTTEVVKTTS-GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV 279
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 280 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 322
Score = 180 (68.4 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +PT+++ + V + ++ +M Y DIFFAQTW D RL+ N T +
Sbjct: 55 YDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKF--NSTIKV 112
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
L + + +W PD+FF+N+K +T PN + ++ D +LY ++ A + L
Sbjct: 113 LRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQL 172
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 173 HNFPMDEHSCP 183
Score = 72 (30.4 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D ++R+FFP F + N YW+ +
Sbjct: 419 MDSYARIFFPTAFCLFNLVYWVSY 442
Score = 38 (18.4 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQD 323
FVF AL+EY ++ + + K + K++
Sbjct: 323 FVFSALVEYGTLHYFVSNRKPSKDKDKKKKN 353
>MGI|MGI:95623 [details] [associations]
symbol:Gabrg2 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 2" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO;IDA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IDA] [GO:0007268 "synaptic transmission"
evidence=IDA] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030424 "axon" evidence=IDA] [GO:0030534 "adult
behavior" evidence=IMP] [GO:0032590 "dendrite membrane"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISO] [GO:0060077 "inhibitory synapse"
evidence=ISO] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 MGI:MGI:95623 GO:GO:0005886 GO:GO:0005737
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0034707 GO:GO:0005254
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
GeneTree:ENSGT00540000070314 KO:K05186 OrthoDB:EOG44BB25 CTD:2566
EMBL:M86572 EMBL:M62374 EMBL:AF233775 EMBL:AF233776 EMBL:AF233777
EMBL:AF233778 EMBL:AF233779 EMBL:AF233780 EMBL:AF233781
EMBL:AF233782 EMBL:AF233783 EMBL:AF233784 EMBL:AF233785
EMBL:AF233786 EMBL:AF233787 EMBL:AF233788 EMBL:AF233789
EMBL:AF233790 EMBL:AF233791 EMBL:AF233792 EMBL:AF233793
EMBL:AF233794 EMBL:AF233795 EMBL:AF233796 EMBL:AF233797
EMBL:AF233798 EMBL:AF233799 EMBL:AF233800 EMBL:AF233801
EMBL:AF233802 EMBL:BC031762 IPI:IPI00131369 IPI:IPI00228358
PIR:JH0316 PIR:JH0317 RefSeq:NP_032099.1 UniGene:Mm.5309
ProteinModelPortal:P22723 SMR:P22723 DIP:DIP-48995N STRING:P22723
PhosphoSite:P22723 PRIDE:P22723 Ensembl:ENSMUST00000070725
Ensembl:ENSMUST00000070735 GeneID:14406 KEGG:mmu:14406
UCSC:uc007imb.1 InParanoid:P22723 OMA:GFTSQKS BindingDB:P22723
ChEMBL:CHEMBL2941 NextBio:285971 Bgee:P22723 Genevestigator:P22723
GermOnline:ENSMUSG00000020436 Uniprot:P22723
Length = 474
Score = 258 (95.9 bits), Expect = 1.8e-26, Sum P(3) = 1.8e-26
Identities = 54/163 (33%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI-ELPQLQL 64
RLT+ C + +P D C L+ S + +++++QW D + L Q
Sbjct: 182 RLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSF 241
Query: 65 VK-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
V T + + S G++ + V F L RR+GY+ TYIP LIV++SWVSFWI +A
Sbjct: 242 VGLRNTTEVVKTTS-GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV 300
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 301 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 343
Score = 180 (68.4 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +PT+++ + V + ++ +M Y DIFFAQTW D RL+ N T +
Sbjct: 76 YDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKF--NSTIKV 133
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
L + + +W PD+FF+N+K +T PN + ++ D +LY ++ A + L
Sbjct: 134 LRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQL 193
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 194 HNFPMDEHSCP 204
Score = 72 (30.4 bits), Expect = 1.8e-26, Sum P(3) = 1.8e-26
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D ++R+FFP F + N YW+ +
Sbjct: 448 MDSYARIFFPTAFCLFNLVYWVSY 471
Score = 41 (19.5 bits), Expect = 1.8e-26, Sum P(3) = 1.8e-26
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFEL 328
FVF AL+EY ++ + + K + K++ + +
Sbjct: 344 FVFSALVEYGTLHYFVSNRKPSKDKDKKKKNPLLRM 379
>UNIPROTKB|Q6PW52 [details] [associations]
symbol:Gabrg2 "GABA-A gamma2 long isoform" species:10116
"Rattus norvegicus" [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
RGD:61966 GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0009791
GO:GO:0030534 EMBL:CH473948 GO:GO:0006821 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:GFTSQKS UniGene:Rn.230132 EMBL:AY574252
IPI:IPI00202998 SMR:Q6PW52 STRING:Q6PW52 Ensembl:ENSRNOT00000004658
InParanoid:Q6PW52 Genevestigator:Q6PW52 Uniprot:Q6PW52
Length = 474
Score = 258 (95.9 bits), Expect = 1.8e-26, Sum P(3) = 1.8e-26
Identities = 54/163 (33%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI-ELPQLQL 64
RLT+ C + +P D C L+ S + +++++QW D + L Q
Sbjct: 182 RLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSF 241
Query: 65 VK-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
V T + + S G++ + V F L RR+GY+ TYIP LIV++SWVSFWI +A
Sbjct: 242 VGLRNTTEVVKTTS-GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV 300
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 301 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 343
Score = 180 (68.4 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +PT+++ + V + ++ +M Y DIFFAQTW D RL+ N T +
Sbjct: 76 YDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKF--NSTIKV 133
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
L + + +W PD+FF+N+K +T PN + ++ D +LY ++ A + L
Sbjct: 134 LRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQL 193
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 194 HNFPMDEHSCP 204
Score = 72 (30.4 bits), Expect = 1.8e-26, Sum P(3) = 1.8e-26
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D ++R+FFP F + N YW+ +
Sbjct: 448 MDSYARIFFPTAFCLFNLVYWVSY 471
Score = 41 (19.5 bits), Expect = 1.8e-26, Sum P(3) = 1.8e-26
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFEL 328
FVF AL+EY ++ + + K + K++ + +
Sbjct: 344 FVFSALVEYGTLHYFVSNRKPSKDKDKKKKNPLLRM 379
>UNIPROTKB|P22300 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR005437
InterPro:IPR005439 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 KO:K05186 OrthoDB:EOG44BB25 EMBL:M55563
IPI:IPI00687809 IPI:IPI00690304 PIR:B39272 RefSeq:NP_776970.1
UniGene:Bt.408 ProteinModelPortal:P22300 SMR:P22300 STRING:P22300
PRIDE:P22300 GeneID:282240 KEGG:bta:282240 CTD:2566
InParanoid:P22300 BindingDB:P22300 ChEMBL:CHEMBL5138
NextBio:20806059 Uniprot:P22300
Length = 475
Score = 258 (95.9 bits), Expect = 1.9e-26, Sum P(3) = 1.9e-26
Identities = 54/163 (33%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI-ELPQLQL 64
RLT+ C + +P D C L+ S + +++++QW D + L Q
Sbjct: 183 RLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVSDTRSWRLYQFSF 242
Query: 65 VK-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
V T + + S G++ + V F L RR+GY+ TYIP LIV++SWVSFWI +A
Sbjct: 243 VGLRNTTEVVKTTS-GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV 301
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 302 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 344
Score = 176 (67.0 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 38/131 (29%), Positives = 65/131 (49%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +PT+++ + V + ++ +M Y DIFF QTW D RL+ N T +
Sbjct: 77 YDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFGQTWYDRRLKF--NSTIKV 134
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
L + + +W PD+FF+N+K +T PN + ++ D +LY ++ A + L
Sbjct: 135 LRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQL 194
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 195 HNFPMDEHSCP 205
Score = 72 (30.4 bits), Expect = 1.9e-26, Sum P(3) = 1.9e-26
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D ++R+FFP F + N YW+ +
Sbjct: 449 MDSYARIFFPTAFCLFNLVYWVSY 472
Score = 41 (19.5 bits), Expect = 1.9e-26, Sum P(3) = 1.9e-26
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFEL 328
FVF AL+EY ++ + + K + K++ + +
Sbjct: 345 FVFSALVEYGTLHYFVSNRKPSKDKDKKKKNPLLRM 380
>MGI|MGI:103156 [details] [associations]
symbol:Gabrg1 "gamma-aminobutyric acid (GABA) A receptor,
subunit gamma 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IDA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0043235
"receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0050811 "GABA receptor binding" evidence=ISO]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
MGI:MGI:103156 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 EMBL:CH466524 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GeneTree:ENSGT00540000070314 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:X55272 EMBL:AK034332
EMBL:AK047752 EMBL:AK049956 EMBL:AK038468 EMBL:AC068252
EMBL:AC092716 EMBL:BC099939 IPI:IPI00308300 IPI:IPI00387194
RefSeq:NP_034382.2 UniGene:Mm.255292 ProteinModelPortal:Q9R0Y8
STRING:Q9R0Y8 PhosphoSite:Q9R0Y8 PRIDE:Q9R0Y8
Ensembl:ENSMUST00000031119 GeneID:14405 KEGG:mmu:14405
BindingDB:Q9R0Y8 ChEMBL:CHEMBL2891 NextBio:285967
Genevestigator:Q9R0Y8 GermOnline:ENSMUSG00000001260 Uniprot:Q9R0Y8
Length = 465
Score = 254 (94.5 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 54/164 (32%), Positives = 84/164 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIELPQLQL 64
RLT+ C + +P D C L+ S + +++ ++W P + +A + L Q
Sbjct: 181 RLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAF 240
Query: 65 V--KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
V +N T + S S G++ + + F L RR+GY+ TYIP L V++SWVSFWI +A
Sbjct: 241 VGLRNST-EISHTIS-GDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDA 298
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 299 VPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 342
Score = 174 (66.3 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 39/131 (29%), Positives = 64/131 (48%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +PT++ V V + +D +M Y DI FAQTW D RL+ N T +
Sbjct: 75 YDNKLRPDIGVRPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFDSRLKF--NSTMKV 132
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
+L + + +W PD+FF+N++ +T PN + ++ D +LY ++ A L
Sbjct: 133 LMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLRLTINAECYLQL 192
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 193 HNFPMDEHSCP 203
Score = 80 (33.2 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 365 IDRFSRVFFPVLFAILNCTYWI 386
ID +SR+FFP FA+ N YW+
Sbjct: 439 IDSYSRIFFPTAFALFNLVYWV 460
Score = 40 (19.1 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 293 FVFMALMEY 301
FVF ALMEY
Sbjct: 343 FVFAALMEY 351
>RGD|621732 [details] [associations]
symbol:Gabrg1 "gamma-aminobutyric acid (GABA) A receptor, gamma
1" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA;ISO]
[GO:0016020 "membrane" evidence=IDA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0043235 "receptor complex" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050811 "GABA receptor
binding" evidence=IPI] InterPro:IPR005437 InterPro:IPR005438
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621
PROSITE:PS00236 RGD:621732 GO:GO:0005886 GO:GO:0016020
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0043235
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GeneTree:ENSGT00540000070314 CTD:2565 KO:K05186
OMA:HYFTSNK OrthoDB:EOG44BB25 EMBL:X57514 IPI:IPI00211960
PIR:S12056 RefSeq:NP_542153.1 UniGene:Rn.10366
ProteinModelPortal:P23574 STRING:P23574 PRIDE:P23574
Ensembl:ENSRNOT00000003240 GeneID:140674 KEGG:rno:140674
UCSC:RGD:621732 InParanoid:P23574 BindingDB:P23574 ChEMBL:CHEMBL296
NextBio:620667 Genevestigator:P23574 GermOnline:ENSRNOG00000002360
Uniprot:P23574
Length = 465
Score = 254 (94.5 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 54/164 (32%), Positives = 84/164 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIELPQLQL 64
RLT+ C + +P D C L+ S + +++ ++W P + +A + L Q
Sbjct: 181 RLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAF 240
Query: 65 V--KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
V +N T + S S G++ + + F L RR+GY+ TYIP L V++SWVSFWI +A
Sbjct: 241 VGLRNST-EISHTIS-GDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDA 298
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 299 VPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 342
Score = 174 (66.3 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 39/131 (29%), Positives = 64/131 (48%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +PT++ V V + +D +M Y DI FAQTW D RL+ N T +
Sbjct: 75 YDNKLRPDIGVRPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFDSRLKF--NSTMKV 132
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
+L + + +W PD+FF+N++ +T PN + ++ D +LY ++ A L
Sbjct: 133 LMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWSDGRVLYTLRLTINAECYLQL 192
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 193 HNFPMDEHSCP 203
Score = 80 (33.2 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 365 IDRFSRVFFPVLFAILNCTYWI 386
ID +SR+FFP FA+ N YW+
Sbjct: 439 IDSYSRIFFPTAFALFNLVYWV 460
Score = 40 (19.1 bits), Expect = 2.0e-26, Sum P(3) = 2.0e-26
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 293 FVFMALMEY 301
FVF ALMEY
Sbjct: 343 FVFAALMEY 351
>UNIPROTKB|E2RH22 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005438 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01621 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 OMA:HYFTSNK
EMBL:AAEX03009032 Ensembl:ENSCAFT00000002978 Uniprot:E2RH22
Length = 468
Score = 254 (94.5 bits), Expect = 2.1e-26, Sum P(3) = 2.1e-26
Identities = 54/164 (32%), Positives = 84/164 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIELPQLQL 64
RLT+ C + +P D C L+ S + +++ ++W P + +A + L Q
Sbjct: 184 RLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAF 243
Query: 65 V--KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
V +N T + S S G++ + + F L RR+GY+ TYIP L V++SWVSFWI +A
Sbjct: 244 VGLRNST-EISHTIS-GDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDA 301
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 302 VPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 345
Score = 174 (66.3 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 39/131 (29%), Positives = 64/131 (48%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +PT++ V V + +D +M Y DI FAQTW D RL+ N T +
Sbjct: 78 YDNKLRPDIGVRPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFDSRLKF--NSTMKV 135
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
+L + + +W PD+FF+N++ +T PN + ++ D +LY ++ A L
Sbjct: 136 LMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLRLTINAECYLQL 195
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 196 HNFPMDEHSCP 206
Score = 80 (33.2 bits), Expect = 2.1e-26, Sum P(3) = 2.1e-26
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 365 IDRFSRVFFPVLFAILNCTYWI 386
ID +SR+FFP FA+ N YW+
Sbjct: 442 IDSYSRIFFPTAFALFNLVYWV 463
Score = 40 (19.1 bits), Expect = 2.1e-26, Sum P(3) = 2.1e-26
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 293 FVFMALMEY 301
FVF ALMEY
Sbjct: 346 FVFAALMEY 354
>UNIPROTKB|F1NVG2 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030534 "adult
behavior" evidence=IEA] InterPro:IPR005437 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 OMA:GFTSQKS
EMBL:AADN02035879 IPI:IPI00820989 Ensembl:ENSGALT00000034794
Uniprot:F1NVG2
Length = 445
Score = 257 (95.5 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 53/163 (32%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT+ C + +P D C L+ S + +++I+QW + V + Q
Sbjct: 161 RLTIDAECQLQLHNFPMDAHSCPLEFSSYGYPREEIIYQWK-RSSVEVGDTRSWRLYQFS 219
Query: 66 KNKTADCSQVYST--GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ ++V T G++ + V F L RR+GY+ TYIP LIV++SWVSFWI +A
Sbjct: 220 FTGLRNTTEVVKTTSGDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV 279
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 280 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 322
Score = 178 (67.7 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 43/148 (29%), Positives = 71/148 (47%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
S +L N +L YD P +PT+++ + V + ++ +M Y DIFFAQ
Sbjct: 42 SDVTLILNGLLEG----YDNKLRPDIGVKPTVIHTDMYVNSIGPVNAINMEYTIDIFFAQ 97
Query: 227 TWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKT 286
TW D RL+ N T + L + + +W PD+FF+N+K +T PN + ++ D
Sbjct: 98 TWYDRRLKF--NSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGR 155
Query: 287 ILYMVKFVFMALMEYCLVNIVLGDSDLP 314
+LY ++ A + L N + P
Sbjct: 156 VLYTLRLTIDAECQLQLHNFPMDAHSCP 183
Score = 72 (30.4 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D ++R+FFP F + N YW+ +
Sbjct: 419 MDSYARIFFPTAFCLFNLVYWVSY 442
Score = 38 (18.4 bits), Expect = 2.7e-26, Sum P(3) = 2.7e-26
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQD 323
FVF AL+EY ++ + + K + K++
Sbjct: 323 FVFSALVEYGTLHYFVSNRKPSKDKDKKKKN 353
>UNIPROTKB|P21548 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 KO:K05186 CTD:2566 EMBL:X54944 IPI:IPI00577501
PIR:S13086 RefSeq:NP_990676.1 UniGene:Gga.50106
ProteinModelPortal:P21548 SMR:P21548 GeneID:396289 KEGG:gga:396289
NextBio:20816340 Uniprot:P21548
Length = 474
Score = 257 (95.5 bits), Expect = 2.9e-26, Sum P(3) = 2.9e-26
Identities = 53/163 (32%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT+ C + +P D C L+ S + +++I+QW + V + Q
Sbjct: 182 RLTIDAECQLQLHNFPMDAHSCPLEFSSYGYPREEIIYQWK-RSSVEVGDTRSWRLYQFS 240
Query: 66 KNKTADCSQVYST--GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ ++V T G++ + V F L RR+GY+ TYIP LIV++SWVSFWI +A
Sbjct: 241 FTGLRNTTEVVKTTSGDYVVMSVYFNLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV 300
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 301 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 343
Score = 178 (67.7 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 43/148 (29%), Positives = 71/148 (47%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
S +L N +L YD P +PT+++ + V + ++ +M Y DIFFAQ
Sbjct: 63 SDVTLILNGLLEG----YDNKLRPDIGVKPTVIHTDMYVNSIGPVNAINMEYTIDIFFAQ 118
Query: 227 TWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKT 286
TW D RL+ N T + L + + +W PD+FF+N+K +T PN + ++ D
Sbjct: 119 TWYDRRLKF--NSTIKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGR 176
Query: 287 ILYMVKFVFMALMEYCLVNIVLGDSDLP 314
+LY ++ A + L N + P
Sbjct: 177 VLYTLRLTIDAECQLQLHNFPMDAHSCP 204
Score = 72 (30.4 bits), Expect = 2.9e-26, Sum P(3) = 2.9e-26
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D ++R+FFP F + N YW+ +
Sbjct: 448 MDSYARIFFPTAFCLFNLVYWVSY 471
Score = 41 (19.5 bits), Expect = 2.9e-26, Sum P(3) = 2.9e-26
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFEL 328
FVF AL+EY ++ + + K + K++ + +
Sbjct: 344 FVFSALVEYGTLHYFVSNRKPSKDKDKKKKNPLLRM 379
>UNIPROTKB|F1MIG7 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0030534 "adult behavior"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214
GO:GO:0009791 GO:GO:0030534 GO:GO:0006821
GeneTree:ENSGT00540000070314 IPI:IPI00690304 UniGene:Bt.408
OMA:GFTSQKS EMBL:DAAA02020916 EMBL:DAAA02020917
Ensembl:ENSBTAT00000013543 ArrayExpress:F1MIG7 Uniprot:F1MIG7
Length = 475
Score = 257 (95.5 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 54/163 (33%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI-ELPQLQL 64
RLT+ C + +P D C L+ S + +++++QW D + L Q
Sbjct: 183 RLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSF 242
Query: 65 VK-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
V T + + S G++ + V F L RR+GY+ TYIP LIV++SWVSFWI +A
Sbjct: 243 VGLRNTTEVVKTTS-GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV 301
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 302 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 344
Score = 180 (68.4 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +PT+++ + V + ++ +M Y DIFFAQTW D RL+ N T +
Sbjct: 77 YDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKF--NSTIKV 134
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
L + + +W PD+FF+N+K +T PN + ++ D +LY ++ A + L
Sbjct: 135 LRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQL 194
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 195 HNFPMDEHSCP 205
Score = 72 (30.4 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D ++R+FFP F + N YW+ +
Sbjct: 449 MDSYARIFFPTAFCLFNLVYWVSY 472
Score = 41 (19.5 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFEL 328
FVF AL+EY ++ + + K + K++ + +
Sbjct: 345 FVFSALVEYGTLHYFVSNRKPSKDKDKKKKNPLLRM 380
>RGD|61966 [details] [associations]
symbol:Gabrg2 "gamma-aminobutyric acid (GABA) A receptor, gamma 2"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;ISO;IDA;TAS] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005237
"inhibitory extracellular ligand-gated ion channel activity"
evidence=TAS] [GO:0005254 "chloride channel activity" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA;TAS]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA;ISO;TAS] [GO:0007268 "synaptic transmission"
evidence=IEA;ISO] [GO:0009791 "post-embryonic development"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=IEA;ISO] [GO:0030534 "adult behavior" evidence=IEA;ISO]
[GO:0032590 "dendrite membrane" evidence=IDA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IDA] [GO:0060077 "inhibitory synapse" evidence=IDA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
RGD:61966 GO:GO:0005737 GO:GO:0030054 GO:GO:0045211 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0032590 GO:GO:0034707
GO:GO:0005254 PDB:2PR9 PDBsum:2PR9 GO:GO:0051932 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 GO:GO:0005237
GeneTree:ENSGT00540000070314 GO:GO:0060077 KO:K05186 CTD:2566
EMBL:L08497 IPI:IPI00192646 PIR:JQ0077 RefSeq:NP_899156.1
UniGene:Rn.230132 ProteinModelPortal:P18508 SMR:P18508
MINT:MINT-3371576 STRING:P18508 PRIDE:P18508
Ensembl:ENSRNOT00000004619 GeneID:29709 KEGG:rno:29709
UCSC:RGD:61966 BindingDB:P18508 ChEMBL:CHEMBL297
EvolutionaryTrace:P18508 NextBio:610135 ArrayExpress:P18508
Genevestigator:P18508 GermOnline:ENSRNOG00000003241 Uniprot:P18508
Length = 466
Score = 258 (95.9 bits), Expect = 3.1e-26, Sum P(3) = 3.1e-26
Identities = 54/163 (33%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI-ELPQLQL 64
RLT+ C + +P D C L+ S + +++++QW D + L Q
Sbjct: 182 RLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSF 241
Query: 65 VK-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
V T + + S G++ + V F L RR+GY+ TYIP LIV++SWVSFWI +A
Sbjct: 242 VGLRNTTEVVKTTS-GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV 300
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 301 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 343
Score = 180 (68.4 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +PT+++ + V + ++ +M Y DIFFAQTW D RL+ N T +
Sbjct: 76 YDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKF--NSTIKV 133
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
L + + +W PD+FF+N+K +T PN + ++ D +LY ++ A + L
Sbjct: 134 LRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQL 193
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 194 HNFPMDEHSCP 204
Score = 72 (30.4 bits), Expect = 3.1e-26, Sum P(3) = 3.1e-26
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D ++R+FFP F + N YW+ +
Sbjct: 440 MDSYARIFFPTAFCLFNLVYWVSY 463
Score = 38 (18.4 bits), Expect = 3.1e-26, Sum P(3) = 3.1e-26
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQD 323
FVF AL+EY ++ + + K + K++
Sbjct: 344 FVFSALVEYGTLHYFVSNRKPSKDKDKKKKN 374
>UNIPROTKB|P18507 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0034220 "ion transmembrane transport"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
[GO:0051932 "synaptic transmission, GABAergic" evidence=ISS]
[GO:0032590 "dendrite membrane" evidence=ISS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0005887 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0032590 GO:GO:0034707 GO:GO:0005254
Orphanet:64280 GO:GO:0051932 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0008503 Orphanet:36387 KO:K05186
OrthoDB:EOG44BB25 CTD:2566 EMBL:X15376 EMBL:AF165124 EMBL:BC059389
EMBL:BC069348 EMBL:BC074795 IPI:IPI00000023 IPI:IPI00419200
PIR:S03905 RefSeq:NP_000807.2 RefSeq:NP_944494.1 UniGene:Hs.7195
ProteinModelPortal:P18507 SMR:P18507 STRING:P18507
PhosphoSite:P18507 DMDM:116242488 PRIDE:P18507
Ensembl:ENST00000356592 Ensembl:ENST00000361925 GeneID:2566
KEGG:hsa:2566 UCSC:uc003lyy.4 UCSC:uc003lyz.4 GeneCards:GC05P161494
HGNC:HGNC:4087 MIM:137164 MIM:604233 MIM:607208 MIM:607681
MIM:611277 neXtProt:NX_P18507 Orphanet:33069 PharmGKB:PA28501
BindingDB:P18507 ChEMBL:CHEMBL1788 GenomeRNAi:2566 NextBio:10145
ArrayExpress:P18507 Bgee:P18507 CleanEx:HS_GABRG2
Genevestigator:P18507 GermOnline:ENSG00000113327 Uniprot:P18507
Length = 467
Score = 258 (95.9 bits), Expect = 3.1e-26, Sum P(3) = 3.1e-26
Identities = 54/163 (33%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI-ELPQLQL 64
RLT+ C + +P D C L+ S + +++++QW D + L Q
Sbjct: 183 RLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSF 242
Query: 65 VK-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
V T + + S G++ + V F L RR+GY+ TYIP LIV++SWVSFWI +A
Sbjct: 243 VGLRNTTEVVKTTS-GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV 301
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 302 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 344
Score = 180 (68.4 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +PT+++ + V + ++ +M Y DIFFAQTW D RL+ N T +
Sbjct: 77 YDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKF--NSTIKV 134
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
L + + +W PD+FF+N+K +T PN + ++ D +LY ++ A + L
Sbjct: 135 LRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQL 194
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 195 HNFPMDEHSCP 205
Score = 72 (30.4 bits), Expect = 3.1e-26, Sum P(3) = 3.1e-26
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D ++R+FFP F + N YW+ +
Sbjct: 441 MDSYARIFFPTAFCLFNLVYWVSY 464
Score = 38 (18.4 bits), Expect = 3.1e-26, Sum P(3) = 3.1e-26
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQD 323
FVF AL+EY ++ + + K + K++
Sbjct: 345 FVFSALVEYGTLHYFVSNRKPSKDKDKKKKN 375
>UNIPROTKB|E1C779 [details] [associations]
symbol:GABRG3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR005437 InterPro:IPR005440
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01623
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:RGRIHID EMBL:AC145944
EMBL:AADN02017655 EMBL:AADN02017656 EMBL:AADN02017657
EMBL:AADN02017658 IPI:IPI00811977 ProteinModelPortal:E1C779
Ensembl:ENSGALT00000030259 Uniprot:E1C779
Length = 465
Score = 256 (95.2 bits), Expect = 4.6e-26, Sum P(3) = 4.6e-26
Identities = 53/162 (32%), Positives = 83/162 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI-ELPQLQL 64
RLT+ C + +P D C L S + +++I++W A D+K L Q
Sbjct: 164 RLTINAECQLQLHNFPMDEHSCPLIFSSYGYPKEEMIYRWRKNSVEAADQKSWRLYQFDF 223
Query: 65 VKNKTADCSQVYST--GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ + S++ +T G++ + + F L RR+GY+ TYIP L V++SWVSFWIK +A
Sbjct: 224 MGLRNT--SEIVNTSAGDYVVMTIYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDA 281
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR ++ SLP VSY+ A+D F++ C
Sbjct: 282 TPARTALGITTVLTMTTLSTIARKSLPRVSYVTAMDLFVTVC 323
Score = 185 (70.2 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 45/148 (30%), Positives = 71/148 (47%)
Query: 167 SSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQ 226
+ +L N +L E YDK P +PT++ + V + + +M Y DIFFAQ
Sbjct: 45 TDVTLILNKLLRE----YDKKLRPDIGLKPTVIDVDIYVNSIGPVSSINMEYQIDIFFAQ 100
Query: 227 TWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKT 286
TW D RLR N T + L + + +W PD+ F+N+K +T PN + ++ D
Sbjct: 101 TWTDSRLRF--NSTMKILTLNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGK 158
Query: 287 ILYMVKFVFMALMEYCLVNIVLGDSDLP 314
ILY ++ A + L N + + P
Sbjct: 159 ILYTLRLTINAECQLQLHNFPMDEHSCP 186
Score = 65 (27.9 bits), Expect = 4.6e-26, Sum P(3) = 4.6e-26
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 363 INIDRFSRVFFPVLFAILNCTYWI 386
+ +D +SRVFF F + N YW+
Sbjct: 437 LELDSYSRVFFHTSFLLFNLIYWV 460
Score = 47 (21.6 bits), Expect = 4.6e-26, Sum P(3) = 4.6e-26
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 286 TILYMVKFVFMALMEYCLVN 305
T+ ++ FVF ALMEY +N
Sbjct: 321 TVCFL--FVFAALMEYATLN 338
>UNIPROTKB|G3MYR4 [details] [associations]
symbol:GABRG2 "Gamma-aminobutyric acid receptor subunit
gamma-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR005437 InterPro:IPR005439
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 EMBL:DAAA02020916 EMBL:DAAA02020917
Ensembl:ENSBTAT00000066231 Uniprot:G3MYR4
Length = 467
Score = 257 (95.5 bits), Expect = 5.0e-26, Sum P(3) = 5.0e-26
Identities = 54/163 (33%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI-ELPQLQL 64
RLT+ C + +P D C L+ S + +++++QW D + L Q
Sbjct: 183 RLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSF 242
Query: 65 VK-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
V T + + S G++ + V F L RR+GY+ TYIP LIV++SWVSFWI +A
Sbjct: 243 VGLRNTTEVVKTTS-GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV 301
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 302 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 344
Score = 180 (68.4 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +PT+++ + V + ++ +M Y DIFFAQTW D RL+ N T +
Sbjct: 77 YDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKF--NSTIKV 134
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
L + + +W PD+FF+N+K +T PN + ++ D +LY ++ A + L
Sbjct: 135 LRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQL 194
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 195 HNFPMDEHSCP 205
Score = 72 (30.4 bits), Expect = 5.0e-26, Sum P(3) = 5.0e-26
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D ++R+FFP F + N YW+ +
Sbjct: 441 MDSYARIFFPTAFCLFNLVYWVSY 464
Score = 38 (18.4 bits), Expect = 5.0e-26, Sum P(3) = 5.0e-26
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQD 323
FVF AL+EY ++ + + K + K++
Sbjct: 345 FVFSALVEYGTLHYFVSNRKPSKDKDKKKKN 375
>UNIPROTKB|F1RR72 [details] [associations]
symbol:GABRG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030534 "adult behavior" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR005439 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01620 PRINTS:PR01622 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0009791
GO:GO:0030534 GO:GO:0006821 GeneTree:ENSGT00540000070314 KO:K05186
CTD:2566 OMA:GFTSQKS EMBL:CU929724 RefSeq:XP_003359873.1
UniGene:Ssc.93419 Ensembl:ENSSSCT00000018537 GeneID:100516405
KEGG:ssc:100516405 Uniprot:F1RR72
Length = 467
Score = 257 (95.5 bits), Expect = 5.0e-26, Sum P(3) = 5.0e-26
Identities = 54/163 (33%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI-ELPQLQL 64
RLT+ C + +P D C L+ S + +++++QW D + L Q
Sbjct: 183 RLTIDAECQLQLHNFPMDEHSCPLEFSSYGYPREEIVYQWKRSSVEVGDTRSWRLYQFSF 242
Query: 65 VK-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
V T + + S G++ + V F L RR+GY+ TYIP LIV++SWVSFWI +A
Sbjct: 243 VGLRNTTEVVKTTS-GDYVVMTVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV 301
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 302 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 344
Score = 180 (68.4 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +PT+++ + V + ++ +M Y DIFFAQTW D RL+ N T +
Sbjct: 77 YDNKLRPDIGVKPTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKF--NSTIKV 134
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
L + + +W PD+FF+N+K +T PN + ++ D +LY ++ A + L
Sbjct: 135 LRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQL 194
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 195 HNFPMDEHSCP 205
Score = 72 (30.4 bits), Expect = 5.0e-26, Sum P(3) = 5.0e-26
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D ++R+FFP F + N YW+ +
Sbjct: 441 MDSYARIFFPTAFCLFNLVYWVSY 464
Score = 38 (18.4 bits), Expect = 5.0e-26, Sum P(3) = 5.0e-26
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQD 323
FVF AL+EY ++ + + K + K++
Sbjct: 345 FVFSALVEYGTLHYFVSNRKPSKDKDKKKKN 375
>WB|WBGene00001586 [details] [associations]
symbol:ggr-1 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707
GO:GO:0005254 EMBL:Z46791 GeneTree:ENSGT00540000070314
HOGENOM:HOG000231336 PIR:T19145 RefSeq:NP_496306.2
ProteinModelPortal:Q09453 SMR:Q09453 PaxDb:Q09453
EnsemblMetazoa:C09G5.1 GeneID:191636 KEGG:cel:CELE_C09G5.1
UCSC:C09G5.1 CTD:191636 WormBase:C09G5.1 eggNOG:NOG307434
InParanoid:Q09453 KO:K05397 OMA:REITHHI NextBio:949766
Uniprot:Q09453
Length = 473
Score = 253 (94.1 bits), Expect = 5.4e-26, Sum P(3) = 5.4e-26
Identities = 50/159 (31%), Positives = 84/159 (52%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R++L + C + YP D+Q C L++ S ++ + LI +W+ P+ V+ I +P + L
Sbjct: 159 RISLTVLCMQDLARYPLDSQNCGLRILSYAYDEEQLIIRWNGGNPVEVNRGIRMPDMHLK 218
Query: 66 KNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPA 125
K Y+TG ++ F + R + +++ +YIPT LIVI+SW SFW+ EA P
Sbjct: 219 HIKFYTKRDKYATGIWSSAVAEFHVDREITHHIIQSYIPTSLIVIISWFSFWLDVEAVPG 278
Query: 126 RXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
R Q + ++ +LP S +KA+D +M C
Sbjct: 279 RVSLSITTLLTLATQSSAARMALPQASDVKAIDVWMGTC 317
Score = 160 (61.4 bits), Expect = 3.8e-13, Sum P(3) = 3.8e-13
Identities = 31/93 (33%), Positives = 48/93 (51%)
Query: 197 TIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWR 256
T V + + G+ S SM + DI+F + W DHRL+ N T + + +W
Sbjct: 66 THVDIQMYIEGMSSFHAQSMDFQVDIYFQEKWVDHRLQ--HNNTKRILVKDPKLFGLLWH 123
Query: 257 PDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILY 289
PD +F NA+ +F +T PN VW+Y + T+ Y
Sbjct: 124 PDLYFANARTASFHDVTQPNFLVWIYPNGTVWY 156
Score = 79 (32.9 bits), Expect = 5.4e-26, Sum P(3) = 5.4e-26
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFAEF 391
IDR+SR FP+ F I N YWI + ++
Sbjct: 437 IDRYSRALFPLAFIIFNIFYWIYYLKY 463
Score = 40 (19.1 bits), Expect = 5.4e-26, Sum P(3) = 5.4e-26
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 293 FVFMALMEYCLVN 305
FVF A++E+ +VN
Sbjct: 320 FVFSAMIEFTVVN 332
>ZFIN|ZDB-GENE-091118-65 [details] [associations]
symbol:gabrg2 "gamma-aminobutyric acid (GABA) A
receptor, gamma 2" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 ZFIN:ZDB-GENE-091118-65
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00540000070314 EMBL:CABZ01068454
EMBL:CABZ01068455 EMBL:CR847531 IPI:IPI00482925
Ensembl:ENSDART00000092821 ArrayExpress:F1RDP2 Bgee:F1RDP2
Uniprot:F1RDP2
Length = 469
Score = 256 (95.2 bits), Expect = 8.2e-26, Sum P(3) = 8.2e-26
Identities = 54/163 (33%), Positives = 82/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKI-ELPQLQL 64
RLT+ C + +P D C L+ S + ++++++W D + L Q
Sbjct: 183 RLTIDAECQLKLNNFPMDEHSCPLEFSSYGYPKEEIVYKWKRSSVEVGDIRSWRLYQFSF 242
Query: 65 VK-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
V T++ + S G++ L V F L RR+GY+ TYIP LIV++SWVSFWI +A
Sbjct: 243 VGLRNTSEVVRTVS-GDYVVLTVFFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAV 301
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 302 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 344
Score = 183 (69.5 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 40/131 (30%), Positives = 66/131 (50%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +PT+++ + V + ++ +M Y DIFFAQTW D RL+ N T +
Sbjct: 77 YDNKLRPDIGVKPTVIHTDMFVNSIGPVNAINMEYTIDIFFAQTWYDRRLKF--NSTMKV 134
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
L + + +W PD+FF+N+K +T PN + ++ D ILY ++ A + L
Sbjct: 135 LRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRILYTLRLTIDAECQLKL 194
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 195 NNFPMDEHSCP 205
Score = 72 (30.4 bits), Expect = 8.2e-26, Sum P(3) = 8.2e-26
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID ++R+FFP F + N YW +
Sbjct: 443 IDSYARIFFPTAFGLFNVVYWFSY 466
Score = 38 (18.4 bits), Expect = 8.2e-26, Sum P(3) = 8.2e-26
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQD 323
FVF AL+EY ++ + + K + K++
Sbjct: 345 FVFAALIEYGTLHYFVSNRKPSKKSDKKKKN 375
>WB|WBGene00013914 [details] [associations]
symbol:lgc-37 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 EMBL:Z93372 KO:K05175
GeneTree:ENSGT00540000070314 EMBL:Z93397 HSSP:P23415 PIR:T18791
RefSeq:NP_499662.2 ProteinModelPortal:G5ECN1 SMR:G5ECN1
IntAct:G5ECN1 EnsemblMetazoa:ZC482.5 GeneID:176694
KEGG:cel:CELE_ZC482.5 CTD:176694 WormBase:ZC482.5 OMA:NIAGGLY
NextBio:893624 Uniprot:G5ECN1
Length = 483
Score = 252 (93.8 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 55/163 (33%), Positives = 85/163 (52%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQ-LQ 63
RLT++ C M +P DTQ C +++ SL + + D++++W D E+ + + Q L
Sbjct: 165 RLTIRSRCQMFLKKFPMDTQACPIEVGSLGYFSKDVVYKWKDVELDAKMGNTLSQYQVLS 224
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
L K++ +S N + L V F L+R+ GYY+ Y P L+V+MSWVSFWI EA+
Sbjct: 225 LSKSERNVSDFRFSDRNISVLNVYFKLQRQQGYYILQIYTPCTLVVVMSWVSFWINKEAS 284
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR + LP VS+ A+D ++ C V
Sbjct: 285 PARVSLGIMTVLSMSTIGFGLRTDLPKVSHSTALDVYILTCFV 327
Score = 137 (53.3 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 185 DK-MRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRL-PENMTSE 242
DK RP + P V +++ + + E +M ++ D +F Q W D RL P N +
Sbjct: 56 DKNFRPVNPDNSPLQVEVDISIRSMGPVSEQNMEFSLDCYFRQKWLDRRLAFTPINPSKP 115
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPN 276
L LK++W PD++ +N + T+T+PN
Sbjct: 116 EIPLASKMLKDIWIPDTYIRNGRKSYLHTLTVPN 149
Score = 71 (30.1 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFAEFL 392
ID FS++ FP L+ I N YW+ + +
Sbjct: 441 IDNFSKLAFPTLYIIFNVFYWVAYLHLI 468
Score = 45 (20.9 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 284 DKTILYMVKFVFMALMEYCLVN 305
D IL F+F A++EY ++N
Sbjct: 319 DVYILTCFVFLFAAMVEYAVIN 340
>RGD|620532 [details] [associations]
symbol:Gabrp "gamma-aminobutyric acid (GABA-A) receptor, pi"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 RGD:620532 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2568 eggNOG:NOG255582
KO:K05189 OrthoDB:EOG4N04F2 EMBL:U95368 IPI:IPI00192631
RefSeq:NP_112291.1 UniGene:Rn.21401 ProteinModelPortal:O09028
STRING:O09028 PRIDE:O09028 GeneID:81658 KEGG:rno:81658
UCSC:RGD:620532 InParanoid:O09028 BindingDB:O09028 ChEMBL:CHEMBL294
NextBio:615218 ArrayExpress:O09028 Genevestigator:O09028
GermOnline:ENSRNOG00000032417 Uniprot:O09028
Length = 440
Score = 249 (92.7 bits), Expect = 2.6e-25, Sum P(3) = 2.6e-25
Identities = 55/164 (33%), Positives = 85/164 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW----DPEMPLAVDEKIELPQ 61
R+T ++C M+ YP DTQ C LQ+ES + +D+ F W D L E + L Q
Sbjct: 153 RITTTVTCNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGL---ENLRLAQ 209
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
+ + T TGN+T L + F L+R + Y++ TY+P+ +V++SWVSFWI E
Sbjct: 210 YTIQQYFTLVTVSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLE 269
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVS-YLKAVDAFMSAC 164
+ PAR S+ SLP + ++KA+D ++ C
Sbjct: 270 SVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGIC 313
Score = 139 (54.0 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 32/111 (28%), Positives = 54/111 (48%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN--MTS 241
Y+K P G P + + + + SI E++M Y A I+ Q W D RL N T
Sbjct: 48 YNKFLRPNFGGDPVRIALTLDIASISSISESNMDYTATIYLRQRWTDPRLVFEGNKSFTL 107
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+ RL+E +W PD++ +K +T+ N + L+ + T+LY ++
Sbjct: 108 DARLVEF-----LWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALR 153
Score = 77 (32.2 bits), Expect = 2.6e-25, Sum P(3) = 2.6e-25
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMFAEF 391
N+DR+S++ FP++F + N YW + F
Sbjct: 413 NVDRYSKLLFPLIFMLANVFYWAYYMYF 440
Score = 39 (18.8 bits), Expect = 2.6e-25, Sum P(3) = 2.6e-25
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDK 324
FVF AL+EY + + K PAK +
Sbjct: 316 FVFGALLEYAVAHYSSLQQMAVKDRGPAKDSE 347
>UNIPROTKB|O09028 [details] [associations]
symbol:Gabrp "Gamma-aminobutyric acid receptor subunit pi"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 RGD:620532
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2568 eggNOG:NOG255582
KO:K05189 OrthoDB:EOG4N04F2 EMBL:U95368 IPI:IPI00192631
RefSeq:NP_112291.1 UniGene:Rn.21401 ProteinModelPortal:O09028
STRING:O09028 PRIDE:O09028 GeneID:81658 KEGG:rno:81658
UCSC:RGD:620532 InParanoid:O09028 BindingDB:O09028 ChEMBL:CHEMBL294
NextBio:615218 ArrayExpress:O09028 Genevestigator:O09028
GermOnline:ENSRNOG00000032417 Uniprot:O09028
Length = 440
Score = 249 (92.7 bits), Expect = 2.6e-25, Sum P(3) = 2.6e-25
Identities = 55/164 (33%), Positives = 85/164 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW----DPEMPLAVDEKIELPQ 61
R+T ++C M+ YP DTQ C LQ+ES + +D+ F W D L E + L Q
Sbjct: 153 RITTTVTCNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGL---ENLRLAQ 209
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
+ + T TGN+T L + F L+R + Y++ TY+P+ +V++SWVSFWI E
Sbjct: 210 YTIQQYFTLVTVSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLE 269
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVS-YLKAVDAFMSAC 164
+ PAR S+ SLP + ++KA+D ++ C
Sbjct: 270 SVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGIC 313
Score = 139 (54.0 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 32/111 (28%), Positives = 54/111 (48%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN--MTS 241
Y+K P G P + + + + SI E++M Y A I+ Q W D RL N T
Sbjct: 48 YNKFLRPNFGGDPVRIALTLDIASISSISESNMDYTATIYLRQRWTDPRLVFEGNKSFTL 107
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+ RL+E +W PD++ +K +T+ N + L+ + T+LY ++
Sbjct: 108 DARLVEF-----LWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALR 153
Score = 77 (32.2 bits), Expect = 2.6e-25, Sum P(3) = 2.6e-25
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMFAEF 391
N+DR+S++ FP++F + N YW + F
Sbjct: 413 NVDRYSKLLFPLIFMLANVFYWAYYMYF 440
Score = 39 (18.8 bits), Expect = 2.6e-25, Sum P(3) = 2.6e-25
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDK 324
FVF AL+EY + + K PAK +
Sbjct: 316 FVFGALLEYAVAHYSSLQQMAVKDRGPAKDSE 347
>UNIPROTKB|F1P9P9 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:THANLNM
EMBL:AAEX03009036 Ensembl:ENSCAFT00000037915 Uniprot:F1P9P9
Length = 465
Score = 250 (93.1 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 56/163 (34%), Positives = 83/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAVD-EKIELPQL 62
RLT+ C M + +P D C L+ S ++ ++I+ W PE + V E L Q
Sbjct: 75 RLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQY 134
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
LV +T + S TG + + V F L+R++GY++ TYIP + VI+S VSFWI E
Sbjct: 135 DLV-GQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKE 193
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP VSY A+D F++ C
Sbjct: 194 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 236
Score = 135 (52.6 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 32/99 (32%), Positives = 47/99 (47%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M Y D+FF QTW D RL+ + RL + + +W PD+FF+N K MT P
Sbjct: 1 MEYTMDVFFRQTWIDKRLKY-DGPIEILRLNNM-MVTKVWTPDTFFRNGKKSVSHNMTAP 58
Query: 276 NHYVWLYKDKTILYMVKFVFMALMEYCLVNIVLGDSDLP 314
N + ++ TILY ++ A LV+ + P
Sbjct: 59 NKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACP 97
Score = 75 (31.5 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+++R+ FPV F N YW+++
Sbjct: 429 IDKYARILFPVTFGAFNMVYWVVY 452
Score = 41 (19.5 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 239 FVFSALIEFAAVN 251
>UNIPROTKB|E2R3M6 [details] [associations]
symbol:GABRD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 CTD:2563 KO:K05184
GeneTree:ENSGT00630000089571 EMBL:AAEX03003861 RefSeq:XP_546729.3
ProteinModelPortal:E2R3M6 Ensembl:ENSCAFT00000030791 GeneID:489609
KEGG:cfa:489609 NextBio:20862765 Uniprot:E2R3M6
Length = 456
Score = 262 (97.3 bits), Expect = 4.5e-25, Sum P(2) = 4.5e-25
Identities = 67/246 (27%), Positives = 114/246 (46%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T ++C M+ YP D QEC L +ES ++++D+++ W + + + K++L Q +
Sbjct: 157 RITSTVACDMDLAKYPMDEQECMLHLESYGYSSEDIVYYWSENQEQIHGLNKLQLAQFTI 216
Query: 65 VKNKTA-DCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
A + S G F L + F L+R G Y+ +Y+P+ L+V MSWVSFWI A
Sbjct: 217 TSYHFATELMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSILLVAMSWVSFWISQAAV 276
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKL 183
PAR +++SLP S +KA+D + C V +
Sbjct: 277 PARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFNAD 336
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
Y K + K + + + + ++I S++ AA + + R P N+ Y
Sbjct: 337 YRKKQKAKAKAKVKVTEQRAEMDVKNAIVLFSLS-AAGVTQELAVSRRQCRRPGNLMGSY 395
Query: 244 RLLEVD 249
R +EV+
Sbjct: 396 RCVEVE 401
Score = 159 (61.0 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 34/99 (34%), Positives = 52/99 (52%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKN 253
G P V + V +D I E +M Y +F Q+W+D RL N T+E L+ ++
Sbjct: 61 GPPVNVALAIEVASIDHISEVNMEYTMTVFLHQSWRDSRLAY--NHTNETLGLDSRFVDK 118
Query: 254 MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+W PD+F NAK+ F +T+ N + L D ILY ++
Sbjct: 119 LWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIR 157
Score = 64 (27.6 bits), Expect = 4.5e-25, Sum P(2) = 4.5e-25
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID ++RV FP F +N YW +A
Sbjct: 431 IDIYARVVFPAAFVAVNVLYWAAYA 455
Score = 37 (18.1 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+EY +
Sbjct: 320 FVFAALVEYAFAH 332
>UNIPROTKB|P19150 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 KO:K05175 CTD:2554 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD OrthoDB:EOG4ZS935 EMBL:X54244
IPI:IPI00582648 PIR:A60033 RefSeq:NP_989649.1 UniGene:Gga.17167
ProteinModelPortal:P19150 Ensembl:ENSGALT00000002609 GeneID:374214
KEGG:gga:374214 InParanoid:P19150 NextBio:20813718 Uniprot:P19150
Length = 455
Score = 244 (91.0 bits), Expect = 4.6e-25, Sum P(3) = 4.6e-25
Identities = 53/163 (32%), Positives = 86/163 (52%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEK-IELPQL 62
RLT++ C M+ +P D C L+ S ++T +++++W +P + V E L Q
Sbjct: 159 RLTVRAECPMHLEDFPMDVHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQY 218
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T D V S TG + + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 219 DLL-GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 277
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 278 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 320
Score = 165 (63.1 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++RP E + T V + V + ++ M Y D+FF Q+WKD RL+ MT
Sbjct: 53 YDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTV- 110
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + +W PD+FF N K MT+PN + + +D T+LY ++ A
Sbjct: 111 LRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRA 164
Score = 77 (32.2 bits), Expect = 4.6e-25, Sum P(3) = 4.6e-25
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR SR+ FP+LF I N YW +
Sbjct: 418 IDRLSRIAFPLLFGIFNLVYWATY 441
Score = 47 (21.6 bits), Expect = 4.6e-25, Sum P(3) = 4.6e-25
Identities = 17/56 (30%), Positives = 23/56 (41%)
Query: 293 FVFMALMEYCLVNIVL--GDSDLPKPPEPAKQDKIFELAAKENARLLTGQPMIPPN 346
FVF AL+E+ VN G + K P K K+ + K+N PN
Sbjct: 323 FVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPLIKKNNTYTAAATSYTPN 378
>ZFIN|ZDB-GENE-081028-62 [details] [associations]
symbol:gabrp "gamma-aminobutyric acid (GABA) A
receptor, pi" species:7955 "Danio rerio" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236
ZFIN:ZDB-GENE-081028-62 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089571 EMBL:BX248097 IPI:IPI00495215
ProteinModelPortal:F1Q6Y8 Ensembl:ENSDART00000074819 Uniprot:F1Q6Y8
Length = 464
Score = 255 (94.8 bits), Expect = 5.7e-25, Sum P(2) = 5.7e-25
Identities = 51/162 (31%), Positives = 87/162 (53%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDP--EMPLAVDEKIELPQLQ 63
R+T ++C M+ YP D QEC+LQ+ES + +D++F W + +D + L Q
Sbjct: 170 RITATIACNMDLTKYPMDRQECTLQLESWGYNLEDVVFYWTRGNDSVKGLDT-LRLAQYS 228
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ T+ VY TG + L + F L+R + +++ TY+P+ L+V++SWVSFWI +
Sbjct: 229 VESYYTSVTKAVYETGLYPKLILHFALRRNVLFFILETYVPSTLLVVLSWVSFWISQSSV 288
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVS-YLKAVDAFMSAC 164
PAR ++ SLP + ++KA+D ++ C
Sbjct: 289 PARTCIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGIC 330
Score = 149 (57.5 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 34/114 (29%), Positives = 63/114 (55%)
Query: 182 KLYDK-MRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLP--EN 238
K Y++ +RP EG P + + + +D+I E +M Y A IF Q W+D RL P E+
Sbjct: 63 KGYNRYLRPNFNEG-PVEIGMSLDIASIDAISEINMDYTATIFLRQRWRDSRLIFPGNES 121
Query: 239 MTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
++ + RL+ + +W PD+F ++K +T+ N + ++ + T+LY ++
Sbjct: 122 LSLDGRLVSL-----LWIPDTFIPDSKRSFLHDVTVENRLIRIFSNGTVLYALR 170
Score = 78 (32.5 bits), Expect = 5.7e-25, Sum P(2) = 5.7e-25
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMFAEF 391
NIDR +R+ FP+ F ++N YW+ + F
Sbjct: 437 NIDRHARILFPMAFLLINIFYWLYYLLF 464
>UNIPROTKB|Q5EA06 [details] [associations]
symbol:GABRP "Gamma-aminobutyric acid receptor subunit pi"
species:9913 "Bos taurus" [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0004890 "GABA-A receptor
activity" evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 HSSP:P23415
GeneTree:ENSGT00630000089571 EMBL:BT020763 IPI:IPI00707024
RefSeq:NP_001015618.1 UniGene:Bt.25960 ProteinModelPortal:Q5EA06
Ensembl:ENSBTAT00000003604 GeneID:517459 KEGG:bta:517459 CTD:2568
eggNOG:NOG255582 InParanoid:Q5EA06 KO:K05189 OMA:ISESDMD
OrthoDB:EOG4N04F2 NextBio:20872445 Uniprot:Q5EA06
Length = 440
Score = 248 (92.4 bits), Expect = 6.1e-25, Sum P(3) = 6.1e-25
Identities = 54/164 (32%), Positives = 86/164 (52%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW----DPEMPLAVDEKIELPQ 61
R+T ++C M+ YP DTQ C LQ+ES + +D+ F W D L E + L Q
Sbjct: 153 RITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGL---ENLRLAQ 209
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
+ + T+ TGN+T L + F L+R + Y++ TY+P+ +V++SWVSFWI +
Sbjct: 210 YTIQQYFTSVTRSQQETGNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLD 269
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVS-YLKAVDAFMSAC 164
+ PAR S+ SLP + ++KA+D ++ C
Sbjct: 270 SVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGIC 313
Score = 144 (55.7 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 33/111 (29%), Positives = 55/111 (49%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN--MTS 241
Y+K P G+P + + V + SI E++M Y A I+ Q W D RL N T
Sbjct: 48 YNKFLRPNFGGEPVQIALTLDVASISSISESNMDYTATIYLRQRWTDQRLVFEGNKSFTL 107
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+ RL+E +W PD++ +K +T+ N + L+ + T+LY ++
Sbjct: 108 DARLVEF-----LWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALR 153
Score = 77 (32.2 bits), Expect = 6.1e-25, Sum P(3) = 6.1e-25
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMFAEF 391
N+DR+S++ FP++F + N YW + F
Sbjct: 413 NVDRYSKLLFPLIFMLANVFYWAYYMYF 440
Score = 37 (18.1 bits), Expect = 6.1e-25, Sum P(3) = 6.1e-25
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+EY + +
Sbjct: 316 FVFGALLEYAVAH 328
>UNIPROTKB|E2RS87 [details] [associations]
symbol:GABRP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
CTD:2568 KO:K05189 OMA:ISESDMD EMBL:AAEX03003017 RefSeq:XP_546242.3
ProteinModelPortal:E2RS87 Ensembl:ENSCAFT00000026815 GeneID:489124
KEGG:cfa:489124 NextBio:20862340 Uniprot:E2RS87
Length = 440
Score = 248 (92.4 bits), Expect = 6.1e-25, Sum P(3) = 6.1e-25
Identities = 54/164 (32%), Positives = 85/164 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW----DPEMPLAVDEKIELPQ 61
R+T ++C M+ YP DTQ C LQ+ES + +D+ F W D L E + L Q
Sbjct: 153 RITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGL---ENLRLAQ 209
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
+ + T TGN+T L + F L+R + Y++ TY+P+ +V++SWVSFWI +
Sbjct: 210 YTIQRYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLD 269
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVS-YLKAVDAFMSAC 164
+ PAR S+ SLP + ++KA+D ++ C
Sbjct: 270 SVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGIC 313
Score = 143 (55.4 bits), Expect = 8.8e-11, Sum P(3) = 8.8e-11
Identities = 32/111 (28%), Positives = 55/111 (49%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN--MTS 241
Y+K P G+P + + + + SI E++M Y A I+ Q W D RL N T
Sbjct: 48 YNKFLRPNFGGEPVQIALTMDIASISSISESNMDYTATIYLRQRWTDQRLVFEGNKSFTL 107
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+ RL+E +W PD++ +K +T+ N + L+ + T+LY ++
Sbjct: 108 DARLVEF-----LWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALR 153
Score = 77 (32.2 bits), Expect = 6.1e-25, Sum P(3) = 6.1e-25
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMFAEF 391
N+DR+S++ FP++F + N YW + F
Sbjct: 413 NVDRYSKLLFPLIFMLANVFYWAYYMYF 440
Score = 37 (18.1 bits), Expect = 6.1e-25, Sum P(3) = 6.1e-25
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+EY + +
Sbjct: 316 FVFGALLEYAVAH 328
>UNIPROTKB|F1Q344 [details] [associations]
symbol:GABRD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 OMA:EYTMTVF
GeneTree:ENSGT00630000089571 EMBL:AAEX03003861
Ensembl:ENSCAFT00000035570 Uniprot:F1Q344
Length = 488
Score = 262 (97.3 bits), Expect = 7.7e-25, Sum P(2) = 7.7e-25
Identities = 67/246 (27%), Positives = 114/246 (46%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW-DPEMPLAVDEKIELPQLQL 64
R+T ++C M+ YP D QEC L +ES ++++D+++ W + + + K++L Q +
Sbjct: 189 RITSTVACDMDLAKYPMDEQECMLHLESYGYSSEDIVYYWSENQEQIHGLNKLQLAQFTI 248
Query: 65 VKNKTA-DCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
A + S G F L + F L+R G Y+ +Y+P+ L+V MSWVSFWI A
Sbjct: 249 TSYHFATELMNFKSAGQFPRLSLHFHLRRNRGVYIIQSYMPSILLVAMSWVSFWISQAAV 308
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKL 183
PAR +++SLP S +KA+D + C V +
Sbjct: 309 PARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFNAD 368
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
Y K + K + + + + ++I S++ AA + + R P N+ Y
Sbjct: 369 YRKKQKAKAKAKVKVTEQRAEMDVKNAIVLFSLS-AAGVTQELAVSRRQCRRPGNLMGSY 427
Query: 244 RLLEVD 249
R +EV+
Sbjct: 428 RCVEVE 433
Score = 127 (49.8 bits), Expect = 8.1e-08, Sum P(4) = 8.1e-08
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 218 YAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNH 277
Y +F Q+W+D RL N T+E L+ ++ +W PD+F NAK+ F +T+ N
Sbjct: 117 YTMTVFLHQSWRDSRLAY--NHTNETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENK 174
Query: 278 YVWLYKDKTILYMVK 292
+ L D ILY ++
Sbjct: 175 LIRLQPDGVILYSIR 189
Score = 64 (27.6 bits), Expect = 7.7e-25, Sum P(2) = 7.7e-25
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMFA 389
ID ++RV FP F +N YW +A
Sbjct: 463 IDIYARVVFPAAFVAVNVLYWAAYA 487
Score = 37 (18.1 bits), Expect = 8.1e-08, Sum P(4) = 8.1e-08
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+EY +
Sbjct: 352 FVFAALVEYAFAH 364
Score = 37 (18.1 bits), Expect = 8.1e-08, Sum P(4) = 8.1e-08
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADI 222
G P V + V +D I E +M A +
Sbjct: 61 GPPVNVALAIEVASIDHISEVNMVGAGQV 89
>WB|WBGene00020605 [details] [associations]
symbol:lgc-50 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 EMBL:FO081094
PIR:T16909 RefSeq:NP_498637.3 ProteinModelPortal:P41849 SMR:P41849
PaxDb:P41849 GeneID:188633 KEGG:cel:CELE_T20B12.9 CTD:188633
WormBase:T20B12.9 eggNOG:NOG322447 HOGENOM:HOG000016259
InParanoid:P41849 OMA:SPSENTF NextBio:939524 Uniprot:P41849
Length = 491
Score = 261 (96.9 bits), Expect = 8.0e-25, Sum P(2) = 8.0e-25
Identities = 54/159 (33%), Positives = 80/159 (50%)
Query: 3 SEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQL 62
S +RL +K C++N ++P D+ C + +ES S TD++ W ++P+ + EK+ELP
Sbjct: 147 SNFRLNVKTPCSVNLKMFPFDSLSCEIVLESYSFNTDEVRLMWH-DVPITMMEKVELPDF 205
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
L+ T Y G + +V F RR G+YLF +Y PT L VI SWV F+ +
Sbjct: 206 DLIGWSTDHQRLEYPNGIWDRAKVKFTFARRYGFYLFQSYFPTSLTVISSWVGFFFDVRS 265
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
AR Q LP VSY+K +D +M
Sbjct: 266 VSARITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWM 304
Score = 124 (48.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 34/123 (27%), Positives = 61/123 (49%)
Query: 164 CTVSSTSL-TFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADI 222
C+ +S +L D L D YD P+ EG + HV G+ I E + ++ D+
Sbjct: 25 CSRNSINLGKLIDTLLTD---YDTHLLPEAEGVNVTIELHV--QGVSGISEITGDFSLDV 79
Query: 223 FFAQTWKDHRLRLPE-NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWL 281
+++ W+D RL N+ + L+ D+ K +W PD+ N+K+ + + N +V L
Sbjct: 80 MYSEIWQDPRLSFKHLNVCATNITLKSDFRKKIWTPDTCIINSKSSSIHSSPSENTFVIL 139
Query: 282 YKD 284
Y++
Sbjct: 140 YEN 142
Score = 67 (28.6 bits), Expect = 8.0e-25, Sum P(2) = 8.0e-25
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 363 INIDRFSRVFFPVLFAILNCTYWIMF 388
+ +DR S + FP+ F I N YW ++
Sbjct: 458 VQVDRCSMIMFPLSFLIFNVVYWSIY 483
>UNIPROTKB|P41849 [details] [associations]
symbol:lgc-50 "Ligand-gated ion channel 50" species:6239
"Caenorhabditis elegans" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 EMBL:FO081094
PIR:T16909 RefSeq:NP_498637.3 ProteinModelPortal:P41849 SMR:P41849
PaxDb:P41849 GeneID:188633 KEGG:cel:CELE_T20B12.9 CTD:188633
WormBase:T20B12.9 eggNOG:NOG322447 HOGENOM:HOG000016259
InParanoid:P41849 OMA:SPSENTF NextBio:939524 Uniprot:P41849
Length = 491
Score = 261 (96.9 bits), Expect = 8.0e-25, Sum P(2) = 8.0e-25
Identities = 54/159 (33%), Positives = 80/159 (50%)
Query: 3 SEYRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQL 62
S +RL +K C++N ++P D+ C + +ES S TD++ W ++P+ + EK+ELP
Sbjct: 147 SNFRLNVKTPCSVNLKMFPFDSLSCEIVLESYSFNTDEVRLMWH-DVPITMMEKVELPDF 205
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
L+ T Y G + +V F RR G+YLF +Y PT L VI SWV F+ +
Sbjct: 206 DLIGWSTDHQRLEYPNGIWDRAKVKFTFARRYGFYLFQSYFPTSLTVISSWVGFFFDVRS 265
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
AR Q LP VSY+K +D +M
Sbjct: 266 VSARITLGVSSLLALTFQFGNVLRHLPRVSYIKCLDVWM 304
Score = 124 (48.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 34/123 (27%), Positives = 61/123 (49%)
Query: 164 CTVSSTSL-TFNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADI 222
C+ +S +L D L D YD P+ EG + HV G+ I E + ++ D+
Sbjct: 25 CSRNSINLGKLIDTLLTD---YDTHLLPEAEGVNVTIELHV--QGVSGISEITGDFSLDV 79
Query: 223 FFAQTWKDHRLRLPE-NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWL 281
+++ W+D RL N+ + L+ D+ K +W PD+ N+K+ + + N +V L
Sbjct: 80 MYSEIWQDPRLSFKHLNVCATNITLKSDFRKKIWTPDTCIINSKSSSIHSSPSENTFVIL 139
Query: 282 YKD 284
Y++
Sbjct: 140 YEN 142
Score = 67 (28.6 bits), Expect = 8.0e-25, Sum P(2) = 8.0e-25
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 363 INIDRFSRVFFPVLFAILNCTYWIMF 388
+ +DR S + FP+ F I N YW ++
Sbjct: 458 VQVDRCSMIMFPLSFLIFNVVYWSIY 483
>MGI|MGI:2387597 [details] [associations]
symbol:Gabrp "gamma-aminobutyric acid (GABA) A receptor, pi"
species:10090 "Mus musculus" [GO:0004890 "GABA-A receptor activity"
evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 MGI:MGI:2387597 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335
GeneTree:ENSGT00630000089571 CTD:2568 eggNOG:NOG255582 KO:K05189
OMA:ISESDMD OrthoDB:EOG4N04F2 EMBL:AK028946 EMBL:AK160577
EMBL:AL669814 EMBL:BC023693 EMBL:BC025550 EMBL:BC027245
EMBL:BC031196 IPI:IPI00154070 RefSeq:NP_666129.1 UniGene:Mm.99989
ProteinModelPortal:Q8QZW7 SMR:Q8QZW7 PhosphoSite:Q8QZW7
PRIDE:Q8QZW7 Ensembl:ENSMUST00000020366 GeneID:216643
KEGG:mmu:216643 UCSC:uc007ikm.1 InParanoid:Q8QZW7 BindingDB:Q8QZW7
ChEMBL:CHEMBL2746 NextBio:375250 Bgee:Q8QZW7 CleanEx:MM_GABRP
Genevestigator:Q8QZW7 GermOnline:ENSMUSG00000020159 Uniprot:Q8QZW7
Length = 440
Score = 246 (91.7 bits), Expect = 9.1e-25, Sum P(3) = 9.1e-25
Identities = 54/164 (32%), Positives = 85/164 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW----DPEMPLAVDEKIELPQ 61
R+T ++C M+ YP DTQ C LQ+ES + +D+ F W D L E + L Q
Sbjct: 153 RITTTVTCNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGL---ENLRLAQ 209
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
+ + T TGN+T L + F L+R + Y++ TY+P+ +V++SWVSFWI +
Sbjct: 210 YTIQQYFTLVTVSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLD 269
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVS-YLKAVDAFMSAC 164
+ PAR S+ SLP + ++KA+D ++ C
Sbjct: 270 SVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGIC 313
Score = 139 (54.0 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 32/111 (28%), Positives = 54/111 (48%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN--MTS 241
Y+K P G P + + + + SI E++M Y A I+ Q W D RL N T
Sbjct: 48 YNKFLRPNFGGDPVRIALTLDIASISSISESNMDYTATIYLRQRWTDPRLVFEGNKSFTL 107
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+ RL+E +W PD++ +K +T+ N + L+ + T+LY ++
Sbjct: 108 DARLVEF-----LWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALR 153
Score = 77 (32.2 bits), Expect = 9.1e-25, Sum P(3) = 9.1e-25
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMFAEF 391
N+DR+S++ FP++F + N YW + F
Sbjct: 413 NVDRYSKLLFPLIFMLANVFYWAYYMYF 440
Score = 39 (18.8 bits), Expect = 9.1e-25, Sum P(3) = 9.1e-25
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDK 324
FVF AL+EY + + K PAK +
Sbjct: 316 FVFGALLEYAVAHYSSLQQMAVKDRGPAKDSE 347
>MGI|MGI:95613 [details] [associations]
symbol:Gabra1 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 1" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006821
"chloride transport" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0008144 "drug binding"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016917 "GABA receptor
activity" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0051932 "synaptic transmission, GABAergic"
evidence=ISO] InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 MGI:MGI:95613 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 CTD:2554 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 OMA:APNIARD
OrthoDB:EOG4ZS935 EMBL:M86566 EMBL:M63436 EMBL:X61430
IPI:IPI00113772 PIR:A39062 RefSeq:NP_034380.1 UniGene:Mm.439668
ProteinModelPortal:P62812 SMR:P62812 IntAct:P62812 STRING:P62812
PhosphoSite:P62812 PaxDb:P62812 PRIDE:P62812
Ensembl:ENSMUST00000020707 GeneID:14394 KEGG:mmu:14394
InParanoid:P62812 BindingDB:P62812 ChEMBL:CHEMBL3139 NextBio:285923
Bgee:P62812 Genevestigator:P62812 GermOnline:ENSMUSG00000010803
Uniprot:P62812
Length = 455
Score = 244 (91.0 bits), Expect = 9.3e-25, Sum P(3) = 9.3e-25
Identities = 53/163 (32%), Positives = 86/163 (52%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEK-IELPQL 62
RLT++ C M+ +P D C L+ S ++T +++++W +P + V E L Q
Sbjct: 158 RLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQY 217
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T D V S TG + + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 218 DLL-GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 276
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 277 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 319
Score = 165 (63.1 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++RP E + T V + V + ++ M Y D+FF Q+WKD RL+ MT
Sbjct: 52 YDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTV- 109
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + +W PD+FF N K MT+PN + + +D T+LY ++ A
Sbjct: 110 LRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRA 163
Score = 77 (32.2 bits), Expect = 9.3e-25, Sum P(3) = 9.3e-25
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR SR+ FP+LF I N YW +
Sbjct: 418 IDRLSRIAFPLLFGIFNLVYWATY 441
Score = 44 (20.5 bits), Expect = 9.3e-25, Sum P(3) = 9.3e-25
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 293 FVFMALMEYCLVNIVL-------GDSDLPKPPEPAKQDKI 325
FVF AL+E+ VN G S +P+ P+ K I
Sbjct: 322 FVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPLI 361
>RGD|61855 [details] [associations]
symbol:Gabra1 "gamma-aminobutyric acid (GABA) A receptor, alpha 1"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=TAS] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=TAS] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IDA] [GO:0006821 "chloride transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] [GO:0008144 "drug binding" evidence=IDA]
[GO:0008503 "benzodiazepine receptor activity" evidence=TAS]
[GO:0016917 "GABA receptor activity" evidence=IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051932 "synaptic transmission, GABAergic" evidence=IDA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
RGD:61855 GO:GO:0005887 GO:GO:0008144 GO:GO:0030054 GO:GO:0045211
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 GO:GO:0051932 KO:K05175 CTD:2554
eggNOG:NOG238757 GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD OrthoDB:EOG4ZS935 EMBL:L08490
EMBL:AY574250 EMBL:BC100061 IPI:IPI00192642 PIR:JQ0158
RefSeq:NP_899155.1 UniGene:Rn.28463 ProteinModelPortal:P62813
SMR:P62813 IntAct:P62813 MINT:MINT-3371441 STRING:P62813
PhosphoSite:P62813 PRIDE:P62813 Ensembl:ENSRNOT00000004725
GeneID:29705 KEGG:rno:29705 UCSC:RGD:61855 InParanoid:P62813
BindingDB:P62813 ChEMBL:CHEMBL343 NextBio:610121
Genevestigator:P62813 GermOnline:ENSRNOG00000003512 GO:GO:0008503
GO:GO:0005237 Uniprot:P62813
Length = 455
Score = 244 (91.0 bits), Expect = 9.3e-25, Sum P(3) = 9.3e-25
Identities = 53/163 (32%), Positives = 86/163 (52%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEK-IELPQL 62
RLT++ C M+ +P D C L+ S ++T +++++W +P + V E L Q
Sbjct: 158 RLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQY 217
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T D V S TG + + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 218 DLL-GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 276
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 277 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 319
Score = 165 (63.1 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++RP E + T V + V + ++ M Y D+FF Q+WKD RL+ MT
Sbjct: 52 YDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTV- 109
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + +W PD+FF N K MT+PN + + +D T+LY ++ A
Sbjct: 110 LRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRA 163
Score = 77 (32.2 bits), Expect = 9.3e-25, Sum P(3) = 9.3e-25
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR SR+ FP+LF I N YW +
Sbjct: 418 IDRLSRIAFPLLFGIFNLVYWATY 441
Score = 44 (20.5 bits), Expect = 9.3e-25, Sum P(3) = 9.3e-25
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 293 FVFMALMEYCLVNIVL-------GDSDLPKPPEPAKQDKI 325
FVF AL+E+ VN G S +P+ P+ K I
Sbjct: 322 FVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPLI 361
>UNIPROTKB|P08219 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005431 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 EMBL:X05717 EMBL:BC114156 IPI:IPI00714377
PIR:A27142 RefSeq:NP_001178048.1 UniGene:Bt.87630
ProteinModelPortal:P08219 PRIDE:P08219 Ensembl:ENSBTAT00000009483
GeneID:780973 KEGG:bta:780973 CTD:2554 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 InParanoid:P08219 OMA:APNIARD OrthoDB:EOG4ZS935
BindingDB:P08219 ChEMBL:CHEMBL3627 NextBio:20924533 Uniprot:P08219
Length = 456
Score = 244 (91.0 bits), Expect = 9.5e-25, Sum P(3) = 9.5e-25
Identities = 53/163 (32%), Positives = 86/163 (52%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEK-IELPQL 62
RLT++ C M+ +P D C L+ S ++T +++++W +P + V E L Q
Sbjct: 159 RLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQY 218
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T D V S TG + + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 219 DLL-GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 277
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 278 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 320
Score = 165 (63.1 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++RP E + T V + V + ++ M Y D+FF Q+WKD RL+ MT
Sbjct: 53 YDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTV- 110
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + +W PD+FF N K MT+PN + + +D T+LY ++ A
Sbjct: 111 LRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRA 164
Score = 77 (32.2 bits), Expect = 9.5e-25, Sum P(3) = 9.5e-25
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR SR+ FP+LF I N YW +
Sbjct: 419 IDRLSRIAFPLLFGIFNLVYWATY 442
Score = 44 (20.5 bits), Expect = 9.5e-25, Sum P(3) = 9.5e-25
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 293 FVFMALMEYCLVNIVL-------GDSDLPKPPEPAKQDKI 325
FVF AL+E+ VN G S +P+ P+ K I
Sbjct: 323 FVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPLI 362
>UNIPROTKB|E2RSP8 [details] [associations]
symbol:GABRA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 CTD:2554 GeneTree:ENSGT00550000074441
OMA:APNIARD EMBL:AAEX03003042 RefSeq:XP_546261.2
ProteinModelPortal:E2RSP8 Ensembl:ENSCAFT00000027295 GeneID:489143
KEGG:cfa:489143 NextBio:20862355 Uniprot:E2RSP8
Length = 456
Score = 244 (91.0 bits), Expect = 9.5e-25, Sum P(3) = 9.5e-25
Identities = 53/163 (32%), Positives = 86/163 (52%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEK-IELPQL 62
RLT++ C M+ +P D C L+ S ++T +++++W +P + V E L Q
Sbjct: 159 RLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQY 218
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T D V S TG + + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 219 DLL-GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 277
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 278 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 320
Score = 165 (63.1 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++RP E + T V + V + ++ M Y D+FF Q+WKD RL+ MT
Sbjct: 53 YDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTV- 110
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + +W PD+FF N K MT+PN + + +D T+LY ++ A
Sbjct: 111 LRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRA 164
Score = 77 (32.2 bits), Expect = 9.5e-25, Sum P(3) = 9.5e-25
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR SR+ FP+LF I N YW +
Sbjct: 419 IDRLSRIAFPLLFGIFNLVYWATY 442
Score = 44 (20.5 bits), Expect = 9.5e-25, Sum P(3) = 9.5e-25
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 293 FVFMALMEYCLVNIVL-------GDSDLPKPPEPAKQDKI 325
FVF AL+E+ VN G S +P+ P+ K I
Sbjct: 323 FVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPLI 362
>UNIPROTKB|P14867 [details] [associations]
symbol:GABRA1 "Gamma-aminobutyric acid receptor subunit
alpha-1" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] [GO:0051932 "synaptic transmission,
GABAergic" evidence=ISS] [GO:0008144 "drug binding" evidence=ISS]
[GO:0016917 "GABA receptor activity" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR001390 InterPro:IPR005431
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614
PROSITE:PS00236 GO:GO:0005887 EMBL:CH471062 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
DrugBank:DB00962 DrugBank:DB01068 DrugBank:DB01159 DrugBank:DB00842
DrugBank:DB00818 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
DrugBank:DB01189 DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028
DrugBank:DB01236 Orphanet:64280 Orphanet:307 DrugBank:DB00273
GO:GO:0051932 DrugBank:DB00292 DrugBank:DB00466 DrugBank:DB00475
DrugBank:DB00829 DrugBank:DB00241 DrugBank:DB00849 DrugBank:DB00683
DrugBank:DB00349 DrugBank:DB01174 DrugBank:DB00794 DrugBank:DB00898
DrugBank:DB01355 DrugBank:DB00404 DrugBank:DB00425 DrugBank:DB00599
KO:K05175 DrugBank:DB00837 CTD:2554 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 OMA:APNIARD
OrthoDB:EOG4ZS935 EMBL:X14766 EMBL:BC030696 EMBL:X13584
IPI:IPI00295235 PIR:A31588 PIR:A60652 RefSeq:NP_000797.2
RefSeq:NP_001121115.1 RefSeq:NP_001121116.1 RefSeq:NP_001121117.1
RefSeq:NP_001121118.1 RefSeq:NP_001121119.1 RefSeq:NP_001121120.1
UniGene:Hs.175934 ProteinModelPortal:P14867 SMR:P14867
IntAct:P14867 STRING:P14867 PhosphoSite:P14867 DMDM:27808653
PRIDE:P14867 DNASU:2554 Ensembl:ENST00000023897
Ensembl:ENST00000393943 Ensembl:ENST00000420560
Ensembl:ENST00000428797 Ensembl:ENST00000437025
Ensembl:ENST00000444819 GeneID:2554 KEGG:hsa:2554 UCSC:uc003lyx.4
GeneCards:GC05P161206 HGNC:HGNC:4075 HPA:CAB001963 HPA:CAB022502
MIM:137160 MIM:611136 neXtProt:NX_P14867 PharmGKB:PA28489
InParanoid:P14867 PhylomeDB:P14867 BindingDB:P14867
ChEMBL:CHEMBL1962 DrugBank:DB00237 DrugBank:DB01353
DrugBank:DB00628 DrugBank:DB00189 DrugBank:DB01205 DrugBank:DB00690
DrugBank:DB00801 DrugBank:DB00371 DrugBank:DB00463 DrugBank:DB00474
DrugBank:DB01107 DrugBank:DB01595 DrugBank:DB00312 DrugBank:DB01588
DrugBank:DB01589 DrugBank:DB00418 DrugBank:DB00306 DrugBank:DB01154
GenomeRNAi:2554 NextBio:10087 ArrayExpress:P14867 Bgee:P14867
CleanEx:HS_GABRA1 Genevestigator:P14867 GermOnline:ENSG00000022355
Uniprot:P14867
Length = 456
Score = 244 (91.0 bits), Expect = 9.5e-25, Sum P(3) = 9.5e-25
Identities = 53/163 (32%), Positives = 86/163 (52%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEK-IELPQL 62
RLT++ C M+ +P D C L+ S ++T +++++W +P + V E L Q
Sbjct: 159 RLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQY 218
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T D V S TG + + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 219 DLL-GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 277
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 278 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 320
Score = 165 (63.1 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++RP E + T V + V + ++ M Y D+FF Q+WKD RL+ MT
Sbjct: 53 YDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTV- 110
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + +W PD+FF N K MT+PN + + +D T+LY ++ A
Sbjct: 111 LRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRA 164
Score = 77 (32.2 bits), Expect = 9.5e-25, Sum P(3) = 9.5e-25
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR SR+ FP+LF I N YW +
Sbjct: 419 IDRLSRIAFPLLFGIFNLVYWATY 442
Score = 44 (20.5 bits), Expect = 9.5e-25, Sum P(3) = 9.5e-25
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 293 FVFMALMEYCLVNIVL-------GDSDLPKPPEPAKQDKI 325
FVF AL+E+ VN G S +P+ P+ K I
Sbjct: 323 FVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPLI 362
>UNIPROTKB|F1RR71 [details] [associations]
symbol:LOC100516706 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 EMBL:CU640458
RefSeq:XP_003134137.3 Ensembl:ENSSSCT00000018538 GeneID:100516706
KEGG:ssc:100516706 OMA:NALAGKX Uniprot:F1RR71
Length = 456
Score = 244 (91.0 bits), Expect = 9.5e-25, Sum P(3) = 9.5e-25
Identities = 53/163 (32%), Positives = 86/163 (52%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEK-IELPQL 62
RLT++ C M+ +P D C L+ S ++T +++++W +P + V E L Q
Sbjct: 159 RLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQY 218
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T D V S TG + + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 219 DLL-GQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 277
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 278 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 320
Score = 165 (63.1 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++RP E + T V + V + ++ M Y D+FF Q+WKD RL+ MT
Sbjct: 53 YDNRLRPGLGE-RVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTV- 110
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + +W PD+FF N K MT+PN + + +D T+LY ++ A
Sbjct: 111 LRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRA 164
Score = 77 (32.2 bits), Expect = 9.5e-25, Sum P(3) = 9.5e-25
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR SR+ FP+LF I N YW +
Sbjct: 419 IDRLSRIAFPLLFGIFNLVYWATY 442
Score = 44 (20.5 bits), Expect = 9.5e-25, Sum P(3) = 9.5e-25
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 293 FVFMALMEYCLVNIVL-------GDSDLPKPPEPAKQDKI 325
FVF AL+E+ VN G S +P+ P+ K I
Sbjct: 323 FVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPLI 362
>RGD|61901 [details] [associations]
symbol:Gabrd "gamma-aminobutyric acid (GABA) A receptor, delta"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 RGD:61901 GO:GO:0005886 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254 HOVERGEN:HBG051707
HOGENOM:HOG000231335 CTD:2563 eggNOG:NOG308574 KO:K05184 OMA:EYTMTVF
OrthoDB:EOG4H9XKN EMBL:L08496 EMBL:BC087714 EMBL:M35162
IPI:IPI00192644 PIR:A34625 RefSeq:NP_058985.1 UniGene:Rn.10927
ProteinModelPortal:P18506 STRING:P18506 Ensembl:ENSRNOT00000022246
GeneID:29689 KEGG:rno:29689 GeneTree:ENSGT00630000089571
InParanoid:P18506 BindingDB:P18506 ChEMBL:CHEMBL337 NextBio:610071
ArrayExpress:P18506 Genevestigator:P18506
GermOnline:ENSRNOG00000016385 Uniprot:P18506
Length = 449
Score = 262 (97.3 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 71/248 (28%), Positives = 114/248 (45%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T ++C M+ YP D QEC L +ES ++++D+++ W + E +D +++L Q
Sbjct: 157 RITSTVACDMDLAKYPMDEQECMLDLESYGYSSEDIVYYWSENQEQIHGLD-RLQLAQFT 215
Query: 64 LVKNK-TADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ + T + S G F L + F L+R G Y+ +Y+P+ L+V MSWVSFWI A
Sbjct: 216 ITSYRFTTELMNFKSAGQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAA 275
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPK 182
PAR +++SLP S +KA+D + C V +
Sbjct: 276 VPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFNA 335
Query: 183 LYDKMRPPK-KEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTS 241
Y K R K K +P + L S+ ++ I Q R+P N+
Sbjct: 336 DYRKKRKAKVKVTKPRAEMDVRNAIVLFSLSAAGVSQELAISRRQG------RVPGNLMG 389
Query: 242 EYRLLEVD 249
YR +EV+
Sbjct: 390 SYRSVEVE 397
Score = 158 (60.7 bits), Expect = 8.3e-11, Sum P(3) = 8.3e-11
Identities = 34/99 (34%), Positives = 52/99 (52%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKN 253
G P V + V +D I E +M Y +F Q+W+D RL N T+E L+ ++
Sbjct: 61 GPPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSY--NHTNETLGLDSRFVDK 118
Query: 254 MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+W PD+F NAK+ F +T+ N + L D ILY ++
Sbjct: 119 LWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIR 157
Score = 60 (26.2 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID ++R FP FA +N YW +
Sbjct: 424 IDIYARAVFPAAFAAVNIIYWAAY 447
Score = 37 (18.1 bits), Expect = 8.3e-11, Sum P(3) = 8.3e-11
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+EY +
Sbjct: 320 FVFAALVEYAFAH 332
>WB|WBGene00008022 [details] [associations]
symbol:lgc-41 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 HOGENOM:HOG000231336 KO:K05397
EMBL:Z50027 RefSeq:NP_001123116.1 UniGene:Cel.11219
ProteinModelPortal:A7LPG1 SMR:A7LPG1 EnsemblMetazoa:C39B10.2b
GeneID:183331 KEGG:cel:CELE_C39B10.2 UCSC:C39B10.2b CTD:183331
WormBase:C39B10.2b eggNOG:NOG296808 InParanoid:A7LPG1 OMA:YFANARQ
NextBio:920750 ArrayExpress:A7LPG1 Uniprot:A7LPG1
Length = 564
Score = 260 (96.6 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 58/168 (34%), Positives = 85/168 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R TL ++C++N YP D Q CS+++ S ++ + W + P+ +E+I LP+ Q+
Sbjct: 144 RCTLTVACSLNLRYYPMDQQLCSIRVLSYAYIAKQVNVTWFDKNPVRFNEEIGLPEFQIE 203
Query: 66 KNKTADCS---------QVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSF 116
A C+ Y + +F+CL L R +GY L +YIPT LIV++SWVSF
Sbjct: 204 HVSNAYCNGSYQYALTENSYKSDDFSCLSGNLFLSRSIGYNLVQSYIPTGLIVMISWVSF 263
Query: 117 WIKPEAAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
WI A PAR + LP VSY KA+D + AC
Sbjct: 264 WIDRRAVPARVTLSFTTLVSLTTLGNGLRFGLPQVSYAKAIDLWYGAC 311
Score = 140 (54.3 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 35/121 (28%), Positives = 61/121 (50%)
Query: 188 RPPKKEGQ-PTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLL 246
RPP P V + + L + + M++ D++ +W+D RL N S+Y L+
Sbjct: 41 RPPTANASVPLGVKLGMYLESLGNFRSSEMSFDVDLYVYMSWQDPRLA--HNF-SDYVLI 97
Query: 247 EVDWL-KNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVN 305
D + K +W PD +F NA+ +FQ +T+PN +++ D T+ Y + L C +N
Sbjct: 98 NNDEIRKQIWLPDLYFANARQASFQEVTVPNFNLFVAPDGTVAYSCR---CTLTVACSLN 154
Query: 306 I 306
+
Sbjct: 155 L 155
Score = 53 (23.7 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 363 INIDRFSRVFFPVLFAILNCTYW 385
+ ID+ R FP F + N YW
Sbjct: 529 LKIDKSCRYLFPAAFLLWNVFYW 551
Score = 44 (20.5 bits), Expect = 1.2e-24, Sum P(3) = 1.2e-24
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARLLTG 339
FVF AL+E+ +N + S+ K AK+ + L + L+ G
Sbjct: 314 FVFCALLEFATINSYMRKSE--KFDSMAKKMQSVVLTGRTRDYLVRG 358
>UNIPROTKB|G3MWU9 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
EMBL:DAAA02068166 Ensembl:ENSBTAT00000065531 Uniprot:G3MWU9
Length = 495
Score = 259 (96.2 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 49/163 (30%), Positives = 89/163 (54%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+T++ C+++ + +P D+ C L S S+ +DLI++W+ M L ++E Q
Sbjct: 189 RMTIEAGCSLHMLKFPMDSHSCPLSFSSFSYPENDLIYKWENFM-LKINESNSWKLFQFD 247
Query: 66 KNKTADCSQVYST--GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
++ ++ +T G+F + + F + RR G+ FH Y+P+ + ++SW+SFWIK E+A
Sbjct: 248 FTGVSNTTETVTTLAGDFIVMTLYFNVSRRFGFVAFHNYVPSSVTTMVSWISFWIKKESA 307
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR S+ + P VSY+ A+D +++ C V
Sbjct: 308 PARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFV 350
Score = 180 (68.4 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 42/115 (36%), Positives = 64/115 (55%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD K+RP E +PT+V ++V L + M Y DI F QTW D RLR N + E
Sbjct: 83 YDYKLRPGIGE-RPTVVTVELSVNTLGPLSIMDMEYTIDITFCQTWYDERLRF--NGSFE 139
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+L + + +W PD+FF+N+K ++T+PN V ++KD +LY ++ A
Sbjct: 140 SFVLSGNLVSLLWVPDTFFRNSKRTYEHSITMPNQMVRIHKDGKVLYTIRMTIEA 194
Score = 69 (29.3 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIM 387
+D +SRV FPV F N YW++
Sbjct: 469 LDNYSRVIFPVTFFFFNVIYWLV 491
>UNIPROTKB|F1MU41 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
OMA:LYTIRMT EMBL:DAAA02068166 IPI:IPI00698565
Ensembl:ENSBTAT00000018017 Uniprot:F1MU41
Length = 508
Score = 259 (96.2 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 49/163 (30%), Positives = 89/163 (54%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+T++ C+++ + +P D+ C L S S+ +DLI++W+ M L ++E Q
Sbjct: 188 RMTIEAGCSLHMLKFPMDSHSCPLSFSSFSYPENDLIYKWENFM-LKINESNSWKLFQFD 246
Query: 66 KNKTADCSQVYST--GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
++ ++ +T G+F + + F + RR G+ FH Y+P+ + ++SW+SFWIK E+A
Sbjct: 247 FTGVSNTTETVTTLAGDFIVMTLYFNVSRRFGFVAFHNYVPSSVTTMVSWISFWIKKESA 306
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR S+ + P VSY+ A+D +++ C V
Sbjct: 307 PARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFV 349
Score = 180 (68.4 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 42/115 (36%), Positives = 64/115 (55%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD K+RP E +PT+V ++V L + M Y DI F QTW D RLR N + E
Sbjct: 82 YDYKLRPGIGE-RPTVVTVELSVNTLGPLSIMDMEYTIDITFCQTWYDERLRF--NGSFE 138
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+L + + +W PD+FF+N+K ++T+PN V ++KD +LY ++ A
Sbjct: 139 SFVLSGNLVSLLWVPDTFFRNSKRTYEHSITMPNQMVRIHKDGKVLYTIRMTIEA 193
Score = 69 (29.3 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIM 387
+D +SRV FPV F N YW++
Sbjct: 482 LDNYSRVIFPVTFFFFNVIYWLV 504
>UNIPROTKB|F1RRX8 [details] [associations]
symbol:GABRP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008100 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
KO:K05189 OMA:ISESDMD EMBL:CU856091 RefSeq:XP_003134108.1
Ensembl:ENSSSCT00000026800 GeneID:100525792 KEGG:ssc:100525792
Uniprot:F1RRX8
Length = 440
Score = 246 (91.7 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 54/164 (32%), Positives = 85/164 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW----DPEMPLAVDEKIELPQ 61
R+T ++C M+ YP DTQ C LQ+ES + +D+ F W D L E + L Q
Sbjct: 153 RITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGL---ENLRLAQ 209
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
+ + T TGN+T L + F L+R + Y++ TY+P+ +V++SWVSFWI +
Sbjct: 210 YTIQQYFTLVTRSQQETGNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLD 269
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVS-YLKAVDAFMSAC 164
+ PAR S+ SLP + ++KA+D ++ C
Sbjct: 270 SVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGIC 313
Score = 143 (55.4 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 32/111 (28%), Positives = 55/111 (49%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN--MTS 241
Y+K P G+P + + + + SI E++M Y A I+ Q W D RL N T
Sbjct: 48 YNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWTDQRLVFEGNKSFTL 107
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+ RL+E +W PD++ +K +T+ N + L+ + T+LY ++
Sbjct: 108 DARLVEF-----LWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALR 153
Score = 76 (31.8 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMFAEF 391
N+DR+S++ FP++F + N YW + F
Sbjct: 413 NVDRYSKLLFPLVFMLANVFYWAYYMYF 440
Score = 37 (18.1 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+EY + +
Sbjct: 316 FVFGALLEYAVAH 328
>MGI|MGI:95622 [details] [associations]
symbol:Gabrd "gamma-aminobutyric acid (GABA) A receptor,
subunit delta" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008098 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01722 PROSITE:PS00236 MGI:MGI:95622 GO:GO:0005886
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2563 eggNOG:NOG308574
KO:K05184 OMA:EYTMTVF OrthoDB:EOG4H9XKN EMBL:AH001900 EMBL:S42882
IPI:IPI00323796 PIR:A36303 PIR:I52630 RefSeq:NP_032098.2
UniGene:Mm.388925 ProteinModelPortal:P22933 SMR:P22933
STRING:P22933 PhosphoSite:P22933 PRIDE:P22933
Ensembl:ENSMUST00000030925 GeneID:14403 KEGG:mmu:14403
InParanoid:P22933 BindingDB:P22933 ChEMBL:CHEMBL3907 NextBio:285959
Bgee:P22933 Genevestigator:P22933 GermOnline:ENSMUSG00000029054
Uniprot:P22933
Length = 449
Score = 261 (96.9 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 71/248 (28%), Positives = 114/248 (45%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T ++C M+ YP D QEC L +ES ++++D+++ W + E +D +++L Q
Sbjct: 157 RITSTVACDMDLAKYPLDEQECMLDLESYGYSSEDIVYYWSENQEQIHGLD-RLQLAQFT 215
Query: 64 LVKNK-TADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+ + T + S G F L + F L+R G Y+ +Y+P+ L+V MSWVSFWI A
Sbjct: 216 ITSYRFTTELMNFKSAGQFPRLSLHFQLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAA 275
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPK 182
PAR +++SLP S +KA+D + C V +
Sbjct: 276 VPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVFVFAALVEYAFAHFNA 335
Query: 183 LYDKMRPPK-KEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTS 241
Y K R K K +P + L S+ ++ I Q R+P N+
Sbjct: 336 DYRKKRKAKVKVTKPRAEMDVRNAIVLFSLSAAGVSQELAISRRQG------RVPGNLMG 389
Query: 242 EYRLLEVD 249
YR +EV+
Sbjct: 390 SYRSVEVE 397
Score = 159 (61.0 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 194 GQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKN 253
G P V + V +D I E +M Y +F Q+W+D RL N T+E L+ ++
Sbjct: 61 GAPVNVALALEVASIDHISEANMEYTMTVFLHQSWRDSRLSY--NHTNETLGLDSRFVDK 118
Query: 254 MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVLGDSD 312
+W PD+F NAK+ F +T+ N + L D ILY ++ + L L + +
Sbjct: 119 LWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITSTVACDMDLAKYPLDEQE 177
Score = 60 (26.2 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID ++R FP FA +N YW +
Sbjct: 424 IDIYARAVFPAAFAAVNIIYWAAY 447
>MGI|MGI:95616 [details] [associations]
symbol:Gabra4 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 4" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:2001023 "regulation of response to
drug" evidence=IMP] InterPro:IPR001390 InterPro:IPR005434
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617
PROSITE:PS00236 MGI:MGI:95616 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007417 GO:GO:0034707
GO:GO:0005254 CTD:2557 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:THANLNM OrthoDB:EOG4MPHQ4 GO:GO:2001023
EMBL:AK013727 IPI:IPI00109065 RefSeq:NP_034381.1 UniGene:Mm.248731
ProteinModelPortal:Q9D6F4 SMR:Q9D6F4 STRING:Q9D6F4
PhosphoSite:Q9D6F4 PRIDE:Q9D6F4 Ensembl:ENSMUST00000031121
GeneID:14397 KEGG:mmu:14397 InParanoid:Q9D6F4 BindingDB:Q9D6F4
ChEMBL:CHEMBL4182 NextBio:285935 Bgee:Q9D6F4 Genevestigator:Q9D6F4
Uniprot:Q9D6F4
Length = 552
Score = 249 (92.7 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 55/163 (33%), Positives = 83/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAVD-EKIELPQL 62
RLT+ C M + +P D C L+ S ++ ++I+ W PE + V E L Q
Sbjct: 165 RLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQY 224
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + S TG + + V F L+R++GY++ TYIP + VI+S VSFWI E
Sbjct: 225 DLI-GQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKE 283
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP VSY A+D F++ C
Sbjct: 284 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 326
Score = 151 (58.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 39/131 (29%), Positives = 57/131 (43%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G T V + V + + M Y D+FF QTW D RL+ +
Sbjct: 59 YDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKY-DGPIEIL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
RL + + +W PD+FF+N K MT PN + ++ TILY ++ A L
Sbjct: 118 RLNNM-MVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRL 176
Query: 304 VNIVLGDSDLP 314
V+ + P
Sbjct: 177 VDFPMDGHACP 187
Score = 75 (31.5 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+++R+ FPV F N YW+++
Sbjct: 516 IDKYARILFPVTFGAFNMVYWVVY 539
Score = 41 (19.5 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 329 FVFSALIEFAAVN 341
>RGD|621670 [details] [associations]
symbol:Gabra4 "gamma-aminobutyric acid (GABA) A receptor, alpha
4" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;TAS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:2001023 "regulation of response to drug" evidence=IEA;ISO]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
RGD:621670 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 RefSeq:NP_542154.3 UniGene:Rn.81205 GeneID:140675
KEGG:rno:140675 CTD:2557 KO:K05175 eggNOG:NOG238757
HOVERGEN:HBG051707 EMBL:L08493 EMBL:S55933 IPI:IPI00200808
PIR:S17551 ProteinModelPortal:P28471 SMR:P28471 STRING:P28471
PhosphoSite:P28471 PRIDE:P28471 UCSC:RGD:621670 BindingDB:P28471
ChEMBL:CHEMBL292 NextBio:620671 Genevestigator:P28471
Uniprot:P28471
Length = 552
Score = 249 (92.7 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 55/163 (33%), Positives = 83/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAVD-EKIELPQL 62
RLT+ C M + +P D C L+ S ++ ++I+ W PE + V E L Q
Sbjct: 165 RLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQY 224
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + S TG + + V F L+R++GY++ TYIP + VI+S VSFWI E
Sbjct: 225 DLI-GQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKE 283
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP VSY A+D F++ C
Sbjct: 284 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 326
Score = 151 (58.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 39/131 (29%), Positives = 57/131 (43%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G T V + V + + M Y D+FF QTW D RL+ +
Sbjct: 59 YDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKY-DGPIEIL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
RL + + +W PD+FF+N K MT PN + ++ TILY ++ A L
Sbjct: 118 RLNNM-MVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRL 176
Query: 304 VNIVLGDSDLP 314
V+ + P
Sbjct: 177 VDFPMDGHACP 187
Score = 75 (31.5 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+++R+ FPV F N YW+++
Sbjct: 516 IDKYARILFPVTFGAFNMVYWVVY 539
Score = 41 (19.5 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 329 FVFSALIEFAAVN 341
>UNIPROTKB|P28471 [details] [associations]
symbol:Gabra4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:10116 "Rattus norvegicus" [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
RGD:621670 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 RefSeq:NP_542154.3 UniGene:Rn.81205 GeneID:140675
KEGG:rno:140675 CTD:2557 KO:K05175 eggNOG:NOG238757
HOVERGEN:HBG051707 EMBL:L08493 EMBL:S55933 IPI:IPI00200808
PIR:S17551 ProteinModelPortal:P28471 SMR:P28471 STRING:P28471
PhosphoSite:P28471 PRIDE:P28471 UCSC:RGD:621670 BindingDB:P28471
ChEMBL:CHEMBL292 NextBio:620671 Genevestigator:P28471
Uniprot:P28471
Length = 552
Score = 249 (92.7 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 55/163 (33%), Positives = 83/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAVD-EKIELPQL 62
RLT+ C M + +P D C L+ S ++ ++I+ W PE + V E L Q
Sbjct: 165 RLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQY 224
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + S TG + + V F L+R++GY++ TYIP + VI+S VSFWI E
Sbjct: 225 DLI-GQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKE 283
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP VSY A+D F++ C
Sbjct: 284 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 326
Score = 151 (58.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 39/131 (29%), Positives = 57/131 (43%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G T V + V + + M Y D+FF QTW D RL+ +
Sbjct: 59 YDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKY-DGPIEIL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
RL + + +W PD+FF+N K MT PN + ++ TILY ++ A L
Sbjct: 118 RLNNM-MVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRL 176
Query: 304 VNIVLGDSDLP 314
V+ + P
Sbjct: 177 VDFPMDGHACP 187
Score = 75 (31.5 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+++R+ FPV F N YW+++
Sbjct: 516 IDKYARILFPVTFGAFNMVYWVVY 539
Score = 41 (19.5 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 329 FVFSALIEFAAVN 341
>UNIPROTKB|P48169 [details] [associations]
symbol:GABRA4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0007417
"central nervous system development" evidence=IEA] [GO:2001023
"regulation of response to drug" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0008503 "benzodiazepine receptor activity"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0007417 GO:GO:0034707 GO:GO:0005254 DrugBank:DB00186
EMBL:CH471069 DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404
CTD:2557 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 OMA:THANLNM OrthoDB:EOG4MPHQ4
GO:GO:2001023 EMBL:U30461 EMBL:AK090780 EMBL:AC107383 EMBL:BC035055
EMBL:U20166 IPI:IPI00008225 PIR:G01928 RefSeq:NP_000800.2
RefSeq:NP_001191195.1 RefSeq:NP_001191196.1 UniGene:Hs.248112
ProteinModelPortal:P48169 SMR:P48169 IntAct:P48169 STRING:P48169
PhosphoSite:P48169 DMDM:206729865 PRIDE:P48169 DNASU:2557
Ensembl:ENST00000264318 GeneID:2557 KEGG:hsa:2557 UCSC:uc003gxg.3
GeneCards:GC04M046836 HGNC:HGNC:4078 MIM:137141 neXtProt:NX_P48169
PharmGKB:PA28492 InParanoid:P48169 PhylomeDB:P48169
BindingDB:P48169 ChEMBL:CHEMBL2472 GenomeRNAi:2557 NextBio:10099
ArrayExpress:P48169 Bgee:P48169 CleanEx:HS_GABRA4
Genevestigator:P48169 GermOnline:ENSG00000109158 Uniprot:P48169
Length = 554
Score = 249 (92.7 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 55/163 (33%), Positives = 83/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAVD-EKIELPQL 62
RLT+ C M + +P D C L+ S ++ ++I+ W PE + V E L Q
Sbjct: 165 RLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQY 224
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + S TG + + V F L+R++GY++ TYIP + VI+S VSFWI E
Sbjct: 225 DLI-GQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKE 283
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP VSY A+D F++ C
Sbjct: 284 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 326
Score = 151 (58.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 39/131 (29%), Positives = 57/131 (43%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G T V + V + + M Y D+FF QTW D RL+ +
Sbjct: 59 YDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKY-DGPIEIL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
RL + + +W PD+FF+N K MT PN + ++ TILY ++ A L
Sbjct: 118 RLNNM-MVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRL 176
Query: 304 VNIVLGDSDLP 314
V+ + P
Sbjct: 177 VDFPMDGHACP 187
Score = 75 (31.5 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+++R+ FPV F N YW+++
Sbjct: 518 IDKYARILFPVTFGAFNMVYWVVY 541
Score = 41 (19.5 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 329 FVFSALIEFAAVN 341
>UNIPROTKB|I3LIV9 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001023 "regulation of response to drug" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005434 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0007417 GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441
GO:GO:2001023 EMBL:CU467563 RefSeq:XP_003356954.1
Ensembl:ENSSSCT00000031430 GeneID:100622712 KEGG:ssc:100622712
OMA:KEPAIAM Uniprot:I3LIV9
Length = 554
Score = 249 (92.7 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 55/163 (33%), Positives = 83/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAVD-EKIELPQL 62
RLT+ C M + +P D C L+ S ++ ++I+ W PE + V E L Q
Sbjct: 165 RLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQY 224
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + S TG + + V F L+R++GY++ TYIP + VI+S VSFWI E
Sbjct: 225 DLI-GQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKE 283
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP VSY A+D F++ C
Sbjct: 284 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 326
Score = 151 (58.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 39/131 (29%), Positives = 57/131 (43%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G T V + V + + M Y D+FF QTW D RL+ +
Sbjct: 59 YDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKY-DGPIEIL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
RL + + +W PD+FF+N K MT PN + ++ TILY ++ A L
Sbjct: 118 RLNNM-MVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRL 176
Query: 304 VNIVLGDSDLP 314
V+ + P
Sbjct: 177 VDFPMDGHACP 187
Score = 75 (31.5 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+++R+ FPV F N YW+++
Sbjct: 518 IDKYARILFPVTFGAFNMVYWVVY 541
Score = 41 (19.5 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 329 FVFSALIEFAAVN 341
>UNIPROTKB|P20237 [details] [associations]
symbol:GABRA4 "Gamma-aminobutyric acid receptor subunit
alpha-4" species:9913 "Bos taurus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:2001023 "regulation of response to drug" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005434 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01617 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0007417
GO:GO:0034707 GO:GO:0005254 CTD:2557 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:X61456 EMBL:BC123424 IPI:IPI00689982
PIR:S06838 RefSeq:NP_776968.1 UniGene:Bt.171
ProteinModelPortal:P20237 SMR:P20237 PRIDE:P20237
Ensembl:ENSBTAT00000022141 GeneID:282238 KEGG:bta:282238
InParanoid:P20237 OMA:THANLNM OrthoDB:EOG4MPHQ4 BindingDB:P20237
ChEMBL:CHEMBL3140 NextBio:20806057 GO:GO:2001023 Uniprot:P20237
Length = 555
Score = 249 (92.7 bits), Expect = 2.4e-24, Sum P(3) = 2.4e-24
Identities = 55/163 (33%), Positives = 83/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAVD-EKIELPQL 62
RLT+ C M + +P D C L+ S ++ ++I+ W PE + V E L Q
Sbjct: 165 RLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQY 224
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + S TG + + V F L+R++GY++ TYIP + VI+S VSFWI E
Sbjct: 225 DLI-GQTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKE 283
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP VSY A+D F++ C
Sbjct: 284 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 326
Score = 151 (58.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 39/131 (29%), Positives = 57/131 (43%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G T V + V + + M Y D+FF QTW D RL+ +
Sbjct: 59 YDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKY-DGPIEIL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
RL + + +W PD+FF+N K MT PN + ++ TILY ++ A L
Sbjct: 118 RLNNM-MVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRL 176
Query: 304 VNIVLGDSDLP 314
V+ + P
Sbjct: 177 VDFPMDGHACP 187
Score = 75 (31.5 bits), Expect = 2.4e-24, Sum P(3) = 2.4e-24
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+++R+ FPV F N YW+++
Sbjct: 519 IDKYARILFPVTFGAFNMVYWVVY 542
Score = 41 (19.5 bits), Expect = 2.4e-24, Sum P(3) = 2.4e-24
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 329 FVFSALIEFAAVN 341
>UNIPROTKB|E1C890 [details] [associations]
symbol:GABRA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:2001023 "regulation of response to drug"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005434
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01617
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 CTD:2557 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:2001023 OMA:KEPAIAM
EMBL:AADN02031278 IPI:IPI00602335 RefSeq:XP_420724.2
ProteinModelPortal:E1C890 Ensembl:ENSGALT00000022968 GeneID:422770
KEGG:gga:422770 NextBio:20825357 Uniprot:E1C890
Length = 554
Score = 248 (92.4 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 55/163 (33%), Positives = 84/163 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAV-DEKIELPQL 62
RLT+ C M + +P D C L+ S ++ ++I+ W PE + V +E L Q
Sbjct: 164 RLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPEESSSLVQY 223
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ + T + S TG + + V F L+R++GY++ TYIP + VI+S VSFWI E
Sbjct: 224 DLLGH-TVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKE 282
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP VSY A+D F++ C
Sbjct: 283 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 325
Score = 153 (58.9 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 39/131 (29%), Positives = 57/131 (43%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G T V + V + + M Y D+FF QTW D RL+ +
Sbjct: 58 YDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDKRLKY-DGPIEIL 116
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
RL + + +W PD+FF+N K MT PN + ++ TILY ++ A L
Sbjct: 117 RLNNL-MVSKVWTPDTFFRNGKKSVAHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRL 175
Query: 304 VNIVLGDSDLP 314
V+ + P
Sbjct: 176 VDFPMDGHACP 186
Score = 75 (31.5 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+++R+ FPV F N YW+++
Sbjct: 518 IDKYARILFPVTFGAFNMVYWVVY 541
Score = 41 (19.5 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 328 FVFSALIEFAAVN 340
>ZFIN|ZDB-GENE-050417-360 [details] [associations]
symbol:zgc:110204 "zgc:110204" species:7955 "Danio
rerio" [GO:0005216 "ion channel activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-050417-360
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4MPHQ4 EMBL:BC092794 IPI:IPI00512589
RefSeq:NP_001017822.1 UniGene:Dr.116107 UniGene:Dr.150874
ProteinModelPortal:Q568M9 SMR:Q568M9 GeneID:550520 KEGG:dre:550520
NextBio:20879762 Uniprot:Q568M9
Length = 557
Score = 250 (93.1 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 56/163 (34%), Positives = 83/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAVD-EKIELPQL 62
RLT+ C M + +P D C L+ S ++ ++I+ W P+ + V E L Q
Sbjct: 165 RLTISAECPMRLVNFPMDGHSCPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQY 224
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T V S TG + + V F LKR++GY++ TYIP + VI+S VSFWI E
Sbjct: 225 DLI-GQTVSSETVKSITGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKE 283
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP VSY A+D F++ C
Sbjct: 284 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 326
Score = 171 (65.3 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 43/131 (32%), Positives = 57/131 (43%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G T V + V + + M Y D+FF QTW D RLR E
Sbjct: 59 YDNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLRY-EGPVEIL 117
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
RL + + +W PD+FF+N K MT PN + K+ TILY ++ A L
Sbjct: 118 RLNNL-MVTKVWTPDTFFRNGKRSVAHNMTAPNRLFRIMKNGTILYTMRLTISAECPMRL 176
Query: 304 VNIVLGDSDLP 314
VN + P
Sbjct: 177 VNFPMDGHSCP 187
Score = 72 (30.4 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID ++R+ FPV F N YW+++
Sbjct: 523 IDEYARILFPVSFGAFNMVYWVVY 546
Score = 41 (19.5 bits), Expect = 3.4e-24, Sum P(3) = 3.4e-24
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 329 FVFSALIEFAAVN 341
>UNIPROTKB|P78334 [details] [associations]
symbol:GABRE "Gamma-aminobutyric acid receptor subunit
epsilon" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=TAS] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008099
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01723 PROSITE:PS00236 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006810
GO:GO:0034707 GO:GO:0005254 HOGENOM:HOG000231337 HOVERGEN:HBG051707
EMBL:U66661 EMBL:Y09763 EMBL:Y09764 EMBL:Y09765 EMBL:Y07637
EMBL:U92283 EMBL:U92281 EMBL:U92282 IPI:IPI00297725
RefSeq:NP_004952.2 UniGene:Hs.22785 ProteinModelPortal:P78334
SMR:P78334 STRING:P78334 PhosphoSite:P78334 DMDM:13124728
PRIDE:P78334 DNASU:2564 Ensembl:ENST00000370328 GeneID:2564
KEGG:hsa:2564 UCSC:uc004ffi.3 CTD:2564 GeneCards:GC0XM151121
HGNC:HGNC:4085 HPA:HPA045918 MIM:300093 neXtProt:NX_P78334
PharmGKB:PA28499 eggNOG:NOG259781 InParanoid:P78334 KO:K05185
OMA:LYTIRMT OrthoDB:EOG4J9MZV PhylomeDB:P78334 BindingDB:P78334
ChEMBL:CHEMBL4635 ChiTaRS:GABRE GenomeRNAi:2564 NextBio:10131
ArrayExpress:P78334 Bgee:P78334 CleanEx:HS_GABRE
Genevestigator:P78334 GermOnline:ENSG00000102287 Uniprot:P78334
Length = 506
Score = 257 (95.5 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 48/163 (29%), Positives = 88/163 (53%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+T+ C+++ + +P D+ C L S S+ +++I++W+ L ++EK Q
Sbjct: 188 RMTIDAGCSLHMLRFPMDSHSCPLSFSSFSYPENEMIYKWE-NFKLEINEKNSWKLFQFD 246
Query: 66 KNKTADCSQVYST--GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
++ +++ +T G+F + + F + RR GY F Y+P+ + ++SWVSFWIK E+A
Sbjct: 247 FTGVSNKTEIITTPVGDFMVMTIFFNVSRRFGYVAFQNYVPSSVTTMLSWVSFWIKTESA 306
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR S+ + P VSY+ A+D +++ C V
Sbjct: 307 PARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFV 349
Score = 186 (70.5 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 43/115 (37%), Positives = 63/115 (54%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD K+RP E +PT+V ++V L + M Y DI F+QTW D RL N T E
Sbjct: 82 YDHKLRPGIGE-KPTVVTVEISVNSLGPLSILDMEYTIDIIFSQTWYDERLCY--NDTFE 138
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+L + + +W PD+FF+N+K +T+PN V +YKD +LY ++ A
Sbjct: 139 SLVLNGNVVSQLWIPDTFFRNSKRTHEHEITMPNQMVRIYKDGKVLYTIRMTIDA 193
Score = 68 (29.0 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIM 387
+D +SRV FPV F N YW++
Sbjct: 480 LDNYSRVVFPVTFFFFNVLYWLV 502
>UNIPROTKB|O00591 [details] [associations]
symbol:GABRP "Gamma-aminobutyric acid receptor subunit pi"
species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0005886
EMBL:CH471062 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034707 GO:GO:0005254
HOVERGEN:HBG051707 HOGENOM:HOG000231335 CTD:2568 eggNOG:NOG255582
KO:K05189 OMA:ISESDMD OrthoDB:EOG4N04F2 EMBL:U95367 EMBL:AF009702
EMBL:AF009694 EMBL:AF009695 EMBL:AF009696 EMBL:AF009697
EMBL:AF009698 EMBL:AF009699 EMBL:AF009700 EMBL:AF009701
EMBL:AK292901 EMBL:BC074810 EMBL:BC074865 EMBL:BC109105
EMBL:BC109106 IPI:IPI00012181 RefSeq:NP_055026.1 UniGene:Hs.26225
ProteinModelPortal:O00591 SMR:O00591 STRING:O00591
PhosphoSite:O00591 PaxDb:O00591 PRIDE:O00591
Ensembl:ENST00000265294 Ensembl:ENST00000518525 GeneID:2568
KEGG:hsa:2568 UCSC:uc003mau.3 GeneCards:GC05P170143 HGNC:HGNC:4089
HPA:CAB014883 MIM:602729 neXtProt:NX_O00591 PharmGKB:PA28503
InParanoid:O00591 PhylomeDB:O00591 BindingDB:O00591
ChEMBL:CHEMBL3506 GenomeRNAi:2568 NextBio:10157 ArrayExpress:O00591
Bgee:O00591 CleanEx:HS_GABRP Genevestigator:O00591
GermOnline:ENSG00000094755 Uniprot:O00591
Length = 440
Score = 246 (91.7 bits), Expect = 4.8e-24, Sum P(3) = 4.8e-24
Identities = 54/164 (32%), Positives = 85/164 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW----DPEMPLAVDEKIELPQ 61
R+T ++C M+ YP DTQ C LQ+ES + +D+ F W D L E + L Q
Sbjct: 153 RITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGNDSVRGL---EHLRLAQ 209
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
+ + T TGN+T L + F L+R + Y++ TY+P+ +V++SWVSFWI +
Sbjct: 210 YTIERYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLD 269
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVS-YLKAVDAFMSAC 164
+ PAR S+ SLP + ++KA+D ++ C
Sbjct: 270 SVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGIC 313
Score = 143 (55.4 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 32/111 (28%), Positives = 55/111 (49%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN--MTS 241
Y+K P G+P + + + + SI E++M Y A I+ Q W D RL N T
Sbjct: 48 YNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWMDQRLVFEGNKSFTL 107
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+ RL+E +W PD++ +K +T+ N + L+ + T+LY ++
Sbjct: 108 DARLVEF-----LWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALR 153
Score = 72 (30.4 bits), Expect = 4.8e-24, Sum P(3) = 4.8e-24
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMFAEF 391
N+D +S++ FP++F + N YW + F
Sbjct: 413 NVDHYSKLLFPLIFMLANVFYWAYYMYF 440
Score = 37 (18.1 bits), Expect = 4.8e-24, Sum P(3) = 4.8e-24
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+EY + +
Sbjct: 316 FVFGALLEYAVAH 328
>UNIPROTKB|F1NY45 [details] [associations]
symbol:GABRP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008100
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01724 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089571
OMA:ISESDMD EMBL:AADN02035937 IPI:IPI00582090
Ensembl:ENSGALT00000003373 Uniprot:F1NY45
Length = 444
Score = 243 (90.6 bits), Expect = 5.3e-24, Sum P(3) = 5.3e-24
Identities = 52/162 (32%), Positives = 87/162 (53%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAVDEKIELPQLQ 63
R+T ++C M+ YP DTQ C LQ+ES + +D+IF W + + EK+ L Q
Sbjct: 151 RITTTVACNMDLSKYPMDTQTCRLQLESWGYDENDVIFTWLRGNDSVHGI-EKLRLSQYT 209
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ + T TG++ L + F L+R + Y++ TY+P+ L+V++SWVSFWI ++
Sbjct: 210 VERYYTLISKSQQETGSYPRLILQFELRRNVLYFILETYVPSTLLVMLSWVSFWITLDSV 269
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVS-YLKAVDAFMSAC 164
PAR S++SL + ++KA+D ++ C
Sbjct: 270 PARTCIGVTTVLSMTTLMIGSRSSLSKTNCFIKAIDVYLGIC 311
Score = 140 (54.3 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 33/111 (29%), Positives = 55/111 (49%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPEN--MTS 241
Y+K P G+P + + + + SI E+ M Y A I+ Q W D RL N T
Sbjct: 46 YNKYLRPYFGGEPVQIAMSLDIASISSISESDMDYTATIYLRQRWTDPRLVFHGNKSFTL 105
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVK 292
+ RL+E+ +W PD++ +K +T+ N + L+ + TILY ++
Sbjct: 106 DARLVEL-----LWVPDTYIVESKRSFLHDVTVGNRLIRLFSNGTILYALR 151
Score = 72 (30.4 bits), Expect = 5.3e-24, Sum P(3) = 5.3e-24
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMFAEF 391
N+D +S++ FP+ F ++N YW + F
Sbjct: 417 NVDHYSKLLFPLFFMLVNVFYWAYYLYF 444
Score = 42 (19.8 bits), Expect = 5.3e-24, Sum P(3) = 5.3e-24
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPE--PAKQ 322
F+F AL+EY + + K P+ PA +
Sbjct: 314 FIFGALVEYAVAHYSSSQKHTAKTPQQGPANE 345
>UNIPROTKB|I3L720 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030424 "axon" evidence=IEA] [GO:0030285 "integral to
synaptic vesicle membrane" evidence=IEA] [GO:0008503
"benzodiazepine receptor activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0006836 "neurotransmitter transport" evidence=IEA] [GO:0001505
"regulation of neurotransmitter levels" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=IEA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IEA]
[GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0001505 GO:GO:0006821
GeneTree:ENSGT00550000074441 GO:GO:0008503 OMA:TTAEPNK
EMBL:FP312872 EMBL:CU861582 Ensembl:ENSSSCT00000023000
Uniprot:I3L720
Length = 367
Score = 232 (86.7 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW----DPEMPLAVDEKIELPQ 61
RLT++ C M+ +P D C L+ S ++TT ++ + W + +A D L Q
Sbjct: 75 RLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS-RLNQ 133
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ + STG +T + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 134 YDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 193
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 194 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 236
Score = 140 (54.3 bits), Expect = 3.7e-11, Sum P(3) = 3.7e-11
Identities = 30/82 (36%), Positives = 41/82 (50%)
Query: 216 MTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIP 275
M Y D+FF Q WKD RL+ M RL + +W PD+FF N K MT+P
Sbjct: 1 MEYTIDVFFRQKWKDERLKFKGPMNI-LRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMP 58
Query: 276 NHYVWLYKDKTILYMVKFVFMA 297
N + + D T+LY ++ A
Sbjct: 59 NKLLRIQDDGTLLYTMRLTVQA 80
Score = 76 (31.8 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR SR+ FPVLF N YW +
Sbjct: 333 IDRMSRIVFPVLFGTFNLVYWATY 356
Score = 41 (19.5 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 239 FVFSALIEFATVN 251
>ZFIN|ZDB-GENE-040426-1692 [details] [associations]
symbol:gabra6a "gamma-aminobutyric acid (GABA) A
receptor, alpha 6a" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-040426-1692
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00550000074441 EMBL:CR628344 EMBL:CU062437
IPI:IPI00800523 Ensembl:ENSDART00000054982 Bgee:E7FGS3
Uniprot:E7FGS3
Length = 435
Score = 247 (92.0 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 54/162 (33%), Positives = 83/162 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVD---EKIELPQL 62
RLT+ C M +P D C L S ++T ++++ W + +VD E L Q
Sbjct: 144 RLTVSAVCPMVLRDFPMDGHTCPLYFGSYAYTNREIVYTWRKGLEASVDFPPESSSLLQY 203
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
L+ + +STG ++ V F L+R+LGY+L TYIP ++V++S VSFWI E+
Sbjct: 204 DLLGQTLFTETYKFSTGLYSVQVVHFYLQRKLGYHLIQTYIPLIMVVVLSQVSFWINKES 263
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR +++SLP VSY A+D F++ C
Sbjct: 264 VPARTVAGITTVLTMTTLSISARSSLPKVSYATAMDWFIAVC 305
Score = 126 (49.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 31/115 (26%), Positives = 50/115 (43%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P T V + V + + +M + D+FF Q W D RL + E
Sbjct: 38 YDNRLRPGSGVSVTEVKTDIFVTSFGPVSDVNMEFTMDMFFRQMWVDERLAFQGPI--EI 95
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMAL 298
L + +W PD+FF+NA+ MT PN + ++ T+ Y ++ A+
Sbjct: 96 LPLNNRMVDKIWTPDTFFRNARKSLAHNMTSPNKLFRIMQNGTVFYTMRLTVSAV 150
Score = 76 (31.8 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID++SR+ FP+ F I N YW ++
Sbjct: 399 IDKYSRILFPLAFGIFNLVYWYIY 422
>WB|WBGene00010741 [details] [associations]
symbol:lgc-49 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 HOGENOM:HOG000016259 EMBL:Z74040
PIR:T23576 RefSeq:NP_505841.2 ProteinModelPortal:Q21420 SMR:Q21420
EnsemblMetazoa:K10D6.1.1 EnsemblMetazoa:K10D6.1.2 GeneID:179547
KEGG:cel:CELE_K10D6.1 UCSC:K10D6.1 CTD:179547 WormBase:K10D6.1
eggNOG:NOG291682 InParanoid:Q21420 OMA:FERRYIW NextBio:905880
Uniprot:Q21420
Length = 457
Score = 251 (93.4 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 52/159 (32%), Positives = 84/159 (52%)
Query: 5 YRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEM--PLAVDEKIELPQL 62
YR+ +K C ++ ++P D QEC L ES ++ ++ +W+ + P++V KI LP
Sbjct: 173 YRVNVKGPCDLSLELFPLDIQECHLIYESFNYNNQEVRMRWNEKSAEPVSVTNKIRLPDF 232
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
+L+K ++ S Y G + L V V +RR +Y Y+PT L + +SW+SF + +A
Sbjct: 233 ELIKIESTRISAPYPAGMWDELHVKLVFERRYIWYFMQAYLPTYLTIFISWISFSLGTKA 292
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFM 161
PAR Q +LP VSY+KA+D +M
Sbjct: 293 MPARTMLGVNALLAMIFQFGNIMRNLPRVSYVKAIDVWM 331
Score = 112 (44.5 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 28/105 (26%), Positives = 48/105 (45%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE-NMTSE 242
Y+K R P + G P V F V + SI+E + + DI+ + W D L+ N +
Sbjct: 67 YNKFRIPNENGVPVQVEFWV--QAITSINEITNDFEMDIYINEMWLDPALKFDHLNPCKQ 124
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTI 287
+ L+ +W P+S F N+K N ++ +Y + T+
Sbjct: 125 NLSVSHQVLEQLWTPNSCFVNSKFAEIHDSPFKNVFLMIYPNGTV 169
Score = 69 (29.3 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 365 IDRFSRVFFPVLFAILNCTYW 385
IDR S + FP FAI N YW
Sbjct: 416 IDRVSAIMFPACFAIFNIVYW 436
>UNIPROTKB|F6Q4V7 [details] [associations]
symbol:GABRG1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007268 "synaptic transmission" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR005437 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01620 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821
GeneTree:ENSGT00540000070314 OMA:HYFTSNK EMBL:DAAA02017594
EMBL:DAAA02017595 EMBL:DAAA02017596 EMBL:DAAA02017597
IPI:IPI00715159 Ensembl:ENSBTAT00000016309 Uniprot:F6Q4V7
Length = 354
Score = 255 (94.8 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 53/163 (32%), Positives = 82/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD-PEMPLAVDEKIELPQLQL 64
RLT+ C + +P D C L+ S + +++ ++W P + +A + L Q
Sbjct: 158 RLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAF 217
Query: 65 VK-NKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
V T + S S G++ + + F L RR+GY+ TYIP L V++SWVSFWI +A
Sbjct: 218 VGLRNTTEISHTIS-GDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAV 276
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR ++ SLP VSY+ A+D F+S C +
Sbjct: 277 PARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFI 319
Score = 174 (66.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 39/131 (29%), Positives = 64/131 (48%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P +PT++ V V + +D +M Y DI FAQTW D RL+ N T +
Sbjct: 52 YDNKLRPDIGVRPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFDSRLKF--NSTMKV 109
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
+L + + +W PD+FF+N++ +T PN + ++ D +LY ++ A L
Sbjct: 110 LMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLRLTINAECYLQL 169
Query: 304 VNIVLGDSDLP 314
N + + P
Sbjct: 170 HNFPMDEHSCP 180
Score = 40 (19.1 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 293 FVFMALMEY 301
FVF ALMEY
Sbjct: 320 FVFAALMEY 328
>ZFIN|ZDB-GENE-080815-1 [details] [associations]
symbol:gabra6b "gamma-aminobutyric acid (GABA) A
receptor, alpha 6b" species:7955 "Danio rerio" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 ZFIN:ZDB-GENE-080815-1 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00550000074441
EMBL:CABZ01078876 EMBL:CABZ01078877 EMBL:CABZ01078878
EMBL:CABZ01078879 IPI:IPI00962798 ProteinModelPortal:F1QGW0
Ensembl:ENSDART00000124708 Uniprot:F1QGW0
Length = 444
Score = 235 (87.8 bits), Expect = 3.2e-23, Sum P(3) = 3.2e-23
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAV-DEKIELPQL 62
RLT+ C M + +P D C L+ S ++ ++++ W P + V E L Q
Sbjct: 148 RLTINAECPMRLINFPMDGHSCPLKFGSYAYPMSEIVYTWKKGPLFSVEVPQESSSLLQY 207
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T ++ S TG + + V F L+R++G++L TYIP + VI++ VSFWI E
Sbjct: 208 DLI-GQTVSSERLKSNTGEYIVMTVYFHLQRKMGFFLIQTYIPCIMTVILAQVSFWIDKE 266
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP VSY A+D F++ C
Sbjct: 267 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 309
Score = 159 (61.0 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 40/131 (30%), Positives = 57/131 (43%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G T V + V + + M Y D+FF QTW D RL+ E
Sbjct: 42 YDNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDDRLKF-EGPIEIL 100
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
RL + + +W PD+FF+N K MT PN + ++ TILY ++ A L
Sbjct: 101 RLNNL-MVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRL 159
Query: 304 VNIVLGDSDLP 314
+N + P
Sbjct: 160 INFPMDGHSCP 170
Score = 75 (31.5 bits), Expect = 3.2e-23, Sum P(3) = 3.2e-23
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID++SR+ FP+ F N YWI++
Sbjct: 410 IDKYSRILFPLSFGAFNLVYWIVY 433
Score = 44 (20.5 bits), Expect = 3.2e-23, Sum P(3) = 3.2e-23
Identities = 22/78 (28%), Positives = 29/78 (37%)
Query: 293 FVFMALMEYCLVNIVLGDSDLPKPPEPAKQDKIFELAAKENARLLTGQPMIPPNHXXXXX 352
FVF AL+E+ VN S L E ++ I AA A G+ ++ P
Sbjct: 312 FVFSALIEFAAVNYF---STLQANKE-LRRANIARAAAAAAAARSDGEGVLNPLDPGGVL 367
Query: 353 XXXXXXXXXXINIDRFSR 370
DRFSR
Sbjct: 368 KKRMNSLSQRSATDRFSR 385
>MGI|MGI:1888498 [details] [associations]
symbol:Gabrq "gamma-aminobutyric acid (GABA) A receptor,
subunit theta" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISS] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=ISS] [GO:0006810
"transport" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0006821 "chloride transport" evidence=ISS] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR008101
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01725 PROSITE:PS00236 MGI:MGI:1888498
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 GO:GO:0006821 GeneTree:ENSGT00630000089685 CTD:55879
eggNOG:NOG317370 HOGENOM:HOG000049189 HOVERGEN:HBG051708 KO:K05192
OrthoDB:EOG48SGSN PANTHER:PTHR18945:SF87 EMBL:AF189260
IPI:IPI00124252 RefSeq:NP_065234.1 UniGene:Mm.117125
UniGene:Mm.487532 ProteinModelPortal:Q9JLF1 SMR:Q9JLF1
PhosphoSite:Q9JLF1 PRIDE:Q9JLF1 Ensembl:ENSMUST00000033711
GeneID:57249 KEGG:mmu:57249 InParanoid:Q9JLF1 BindingDB:Q9JLF1
ChEMBL:CHEMBL3249 NextBio:313527 Bgee:Q9JLF1 Genevestigator:Q9JLF1
GermOnline:ENSMUSG00000031344 Uniprot:Q9JLF1
Length = 638
Score = 242 (90.2 bits), Expect = 4.1e-23, Sum P(3) = 4.1e-23
Identities = 46/160 (28%), Positives = 85/160 (53%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
RLT +C+++ +P D Q C L++ES +T +D++ W+ + + + + + +PQ +
Sbjct: 176 RLTTTAACSLDLQKFPMDKQSCKLEVESYGYTVEDIVLSWEDDNAIHITDGLHIPQYTYL 235
Query: 66 KNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAP 124
+T +VY TG++ L V F ++R + YL Y PT L I+SW+SFW+ +++
Sbjct: 236 -GRTITSKEVYFYTGSYMRLIVKFQVQREVRSYLVQVYWPTVLTTILSWISFWMNYDSSA 294
Query: 125 ARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR + + LP +S +KA+D ++ C
Sbjct: 295 ARVTIGLTSILVLTTIDSHMRDKLPHISCIKAIDIYILVC 334
Score = 158 (60.7 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 47/160 (29%), Positives = 68/160 (42%)
Query: 141 HAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVY 200
H + +S P V +D F C + IL YD P G P V
Sbjct: 33 HFELSSSTPEV----ILDLFN--CKNCANEAVVQKILDRVLSTYDVRLRPNFGGAPVPVS 86
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---NMTSEYRLLEVDWLKNMWRP 257
+ V ++ I E +M Y +F QTWKD RL E N+T +YR+ E +W P
Sbjct: 87 VSIYVSSIEQISEINMDYTITMFLHQTWKDTRLAYYETNLNLTLDYRMHE-----KLWVP 141
Query: 258 DSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
D +F N+K +T+ N L+ D T+ Y ++ A
Sbjct: 142 DCYFVNSKDAFVHDVTVENRVFQLHPDGTVRYGIRLTTTA 181
Score = 68 (29.0 bits), Expect = 4.1e-23, Sum P(3) = 4.1e-23
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 365 IDRFSRVFFPVLFAILNCTYWI 386
+DR+SR FP+ F + N YW+
Sbjct: 613 VDRWSRFLFPLSFGLFNVVYWL 634
Score = 51 (23.0 bits), Expect = 4.1e-23, Sum P(3) = 4.1e-23
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 284 DKTILYMVKFVFMALMEYCLVNIVLGDSDLPK 315
D IL + FVF++L+EY +N + S +P+
Sbjct: 328 DIYILVCLFFVFLSLLEYVYINYLFF-SQVPR 358
Score = 45 (20.9 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 218 YAADIFFAQT-WKDHR-LRLPENMTSEYRLLEV 248
Y +FF+Q ++HR R P + + YR EV
Sbjct: 347 YINYLFFSQVPRRNHRRCRKPRRVVARYRYQEV 379
>RGD|61856 [details] [associations]
symbol:Gabra2 "gamma-aminobutyric acid (GABA) A receptor, alpha 2"
species:10116 "Rattus norvegicus" [GO:0001505 "regulation of
neurotransmitter levels" evidence=ISO] [GO:0004890 "GABA-A receptor
activity" evidence=TAS] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0006836 "neurotransmitter transport"
evidence=ISO] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA;ISO] [GO:0008503 "benzodiazepine receptor
activity" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0032590 "dendrite membrane"
evidence=IDA] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0032590 GO:GO:0034707
GO:GO:0005254 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:L08491 IPI:IPI00950967 PIR:JH0370
UniGene:Rn.48180 ProteinModelPortal:P23576 PhosphoSite:P23576
PRIDE:P23576 UCSC:RGD:61856 InParanoid:P23576 BindingDB:P23576
ChEMBL:CHEMBL341 ArrayExpress:P23576 Genevestigator:P23576
GermOnline:ENSRNOG00000002349 Uniprot:P23576
Length = 451
Score = 235 (87.8 bits), Expect = 6.0e-23, Sum P(3) = 6.0e-23
Identities = 51/162 (31%), Positives = 83/162 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW--DPEMPLAV-DEKIELPQL 62
RLT++ C M+ +P D C L+ S ++TT ++ + W +P + V + L Q
Sbjct: 159 RLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNPSDSVQVAPDGSRLNQY 218
Query: 63 QLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEA 122
L+ + STG +T + F LKR++GY++ TY+P + VI+S VSFW+ E+
Sbjct: 219 DLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRES 278
Query: 123 APARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
PAR ++ SLP V+Y A+D F++ C
Sbjct: 279 VPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 320
Score = 159 (61.0 bits), Expect = 6.1e-13, Sum P(3) = 6.1e-13
Identities = 36/114 (31%), Positives = 51/114 (44%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P T V+ ++ V + + M Y D+FF Q WKD RL+ M
Sbjct: 53 YDNRLRPGLGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNI-L 111
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL +W PD+FF N K MT+PN + + D T+LY ++ A
Sbjct: 112 RLNN-SMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQA 164
Score = 76 (31.8 bits), Expect = 6.0e-23, Sum P(3) = 6.0e-23
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR SR+ FPVLF N YW +
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATY 440
Score = 41 (19.5 bits), Expect = 6.0e-23, Sum P(3) = 6.0e-23
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 323 FVFSALIEFATVN 335
>UNIPROTKB|G3V875 [details] [associations]
symbol:Gabrq "Gamma-aminobutyric acid A receptor, theta,
isoform CRA_b" species:10116 "Rattus norvegicus" [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR008101 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01725 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GeneTree:ENSGT00630000089685 OMA:FFHQTWK PANTHER:PTHR18945:SF87
EMBL:CH474110 UniGene:Rn.81067 ProteinModelPortal:G3V875
Ensembl:ENSRNOT00000022880 RGD:68331 Uniprot:G3V875
Length = 640
Score = 242 (90.2 bits), Expect = 6.7e-23, Sum P(3) = 6.7e-23
Identities = 48/166 (28%), Positives = 88/166 (53%)
Query: 2 TSEY--RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIEL 59
T +Y RLT +C+++ +P D Q C L++ES +T +D++ W+ + + + +++ +
Sbjct: 170 TVQYGIRLTTTAACSLDLQKFPMDKQSCKLEVESYGYTVEDIVLSWEDDNAIHITDELHI 229
Query: 60 PQLQLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWI 118
PQ + +T +VY TG++ L V F ++R + YL Y PT L I+SW+SFW+
Sbjct: 230 PQYTYL-GRTITSKEVYFYTGSYMRLIVKFQVQREVRSYLVQVYWPTVLTTILSWISFWM 288
Query: 119 KPEAAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
++ AR + + LP +S +KA+D ++ C
Sbjct: 289 NYGSSAARVTIGLTSILVLTTIDSHMRDKLPHISCIKAIDIYILVC 334
Score = 158 (60.7 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 47/160 (29%), Positives = 68/160 (42%)
Query: 141 HAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVY 200
H + +S+P V +D F C + IL YD P G P V
Sbjct: 33 HFELSSSMPEV----ILDLFN--CKNCANEAVVQKILDRVLSTYDVRLRPNFGGAPVPVS 86
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---NMTSEYRLLEVDWLKNMWRP 257
+ V ++ I E +M Y +F QTWKD RL E N+T +YR+ E +W P
Sbjct: 87 ISIYVSSIEQISEINMDYTITMFLHQTWKDTRLAYYETNLNLTLDYRMHE-----KLWVP 141
Query: 258 DSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
D +F N+K +T N L+ D T+ Y ++ A
Sbjct: 142 DCYFVNSKDAFVHDVTAENRVFQLHPDGTVQYGIRLTTTA 181
Score = 68 (29.0 bits), Expect = 6.7e-23, Sum P(3) = 6.7e-23
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 365 IDRFSRVFFPVLFAILNCTYWI 386
+DR+SR FP+ F + N YW+
Sbjct: 615 VDRWSRFLFPLSFGLFNVVYWL 636
Score = 49 (22.3 bits), Expect = 6.7e-23, Sum P(3) = 6.7e-23
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 284 DKTILYMVKFVFMALMEYCLVN 305
D IL + FVF++L+EY +N
Sbjct: 328 DIYILVCLFFVFLSLLEYVYIN 349
Score = 45 (20.9 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 218 YAADIFFAQT-WKDHR-LRLPENMTSEYRLLEV 248
Y +FF+Q ++HR R P + + YR EV
Sbjct: 347 YINYLFFSQAPRRNHRRCRKPRRVVARYRYQEV 379
>ZFIN|ZDB-GENE-061013-194 [details] [associations]
symbol:gabra1 "gamma-aminobutyric acid (GABA) A
receptor, alpha 1" species:7955 "Danio rerio" [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005431 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01614 PROSITE:PS00236
ZFIN:ZDB-GENE-061013-194 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 KO:K05175 CTD:2554
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OMA:APNIARD EMBL:CR847531 EMBL:CABZ01068465
EMBL:CABZ01068466 EMBL:CABZ01068467 EMBL:CABZ01095604 EMBL:BC124697
IPI:IPI00804069 RefSeq:NP_001070794.1 UniGene:Dr.134090
Ensembl:ENSDART00000100000 GeneID:768183 KEGG:dre:768183
InParanoid:Q08BJ3 NextBio:20918498 Uniprot:Q08BJ3
Length = 459
Score = 235 (87.8 bits), Expect = 7.2e-23, Sum P(3) = 7.2e-23
Identities = 50/163 (30%), Positives = 84/163 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD---PEMPLAVDEKIELPQL 62
RLT++ C M+ +P D C L+ S ++T ++++ W + + D+ L Q
Sbjct: 159 RLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYVWTRGAAQSVVVADDGSRLNQY 218
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ ++ D V S TG + + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 219 DLM-GQSVDSGVVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 277
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 278 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 320
Score = 159 (61.0 bits), Expect = 6.8e-13, Sum P(3) = 6.8e-13
Identities = 37/115 (32%), Positives = 60/115 (52%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++RP E + T V + V + + ++ M Y D+FF Q+WKD RL+ M +
Sbjct: 53 YDNRLRPGLGE-RVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPM-AV 110
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + +W PD+FF N K MT+PN + + ++ T+LY ++ A
Sbjct: 111 LRLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRA 164
Score = 69 (29.3 bits), Expect = 7.2e-23, Sum P(3) = 7.2e-23
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR +R+ FP+LF N YW +
Sbjct: 421 IDRIARIAFPLLFGTFNLVYWATY 444
Score = 48 (22.0 bits), Expect = 7.2e-23, Sum P(3) = 7.2e-23
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 293 FVFMALMEYCLVNIVL--GDSDLPKPPEPAKQDKIFELAAKEN 333
FVF AL+E+ VN G + K P KQ K E K+N
Sbjct: 323 FVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKKESLLKKN 365
>WB|WBGene00006784 [details] [associations]
symbol:unc-49 species:6239 "Caenorhabditis elegans"
[GO:0045211 "postsynaptic membrane" evidence=IEA;IDA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0043058 "regulation of backward locomotion" evidence=IMP]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IMP] [GO:0031594 "neuromuscular junction" evidence=IDA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0031594
GO:GO:0007626 GO:GO:0043058 GeneTree:ENSGT00630000089685
EMBL:Z50016 UniGene:Cel.18075 GeneID:176472 KEGG:cel:CELE_T21C12.1
CTD:176472 NextBio:892718 UCSC:T21C12.1b RefSeq:NP_001022781.2
ProteinModelPortal:Q22637 SMR:Q22637 PRIDE:Q22637
EnsemblMetazoa:T21C12.1a WormBase:T21C12.1a InParanoid:Q22637
ArrayExpress:Q22637 Uniprot:Q22637
Length = 1095
Score = 259 (96.2 bits), Expect = 7.6e-23, Sum P(3) = 7.6e-23
Identities = 58/174 (33%), Positives = 91/174 (52%)
Query: 2 TSEYRLTLKLSCAMNFMIYPHDTQECSLQMESL-SHTTDDL----------IFQWDPEMP 50
TS+ RLT+ +C M+ ++P D+Q C L++ES S + D+ I E
Sbjct: 157 TSQ-RLTVTATCPMDLKLFPMDSQHCKLEIESCKSLCSPDIFSPNGYSILDIMYVSHEKK 215
Query: 51 LAVDEKIELPQLQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVI 110
E ELPQ L K + +Q S+G ++ L F+ KR +G+Y+ Y+P+ LIV+
Sbjct: 216 SVSTESYELPQFVLQSIKVVNHTQKLSSGEYSRLCWFFLFKRNIGFYIIQIYLPSVLIVV 275
Query: 111 MSWVSFWIKPEAAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+SWVSFW+ +A PAR + +S+P VSY+K++D F+ C
Sbjct: 276 ISWVSFWLSRDATPARVALGVTTVLTMTTLMTMTNSSMPKVSYVKSIDIFLGVC 329
Score = 200 (75.5 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 51/182 (28%), Positives = 83/182 (45%)
Query: 24 TQECSLQMESLSHTTDDLIFQW----DPEMPLAV--DEKIELPQLQLVKNKTADCSQVYS 77
T S + +++T ++ ++W +P AV D IEL + K S
Sbjct: 825 TSSSSSTSSTYAYSTAEIEYKWCTSKEPNCSTAVKADANIELSSYKFTKICQKRTLASTS 884
Query: 78 TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARXXXXXXXXXXX 137
+G ++ L V F+ R G+Y + P L+V++SW+SFWI ++AP+R
Sbjct: 885 SGTYSRLRVSFIFDRDSGFYFLQIFFPASLVVVLSWISFWINRDSAPSRTLIGTMTVLTE 944
Query: 138 XXQHAKSQASLPPVSYLKAVDAFMSAC--TVSSTSLTFNDILPEDPKLYDKMRPPKK-EG 194
+ LPPV+Y+KAVD F+ C V + + + K D+ R KK E
Sbjct: 945 THLMTGTNRRLPPVAYVKAVDVFLGFCYLLVILALIEYACVAYSKKKNEDRRRREKKTEH 1004
Query: 195 QP 196
+P
Sbjct: 1005 KP 1006
Score = 183 (69.5 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 43/146 (29%), Positives = 69/146 (47%)
Query: 26 ECSLQMESLSHTTDDLIFQW-----DPEMPLAVDEKIELPQLQLVKNKTADCSQVYSTGN 80
+ S+ + + T D+ + W D E+ + +LPQ Q S+G
Sbjct: 443 QASVFLYQNGYETKDIDYYWGKKRTDLEITAVKFDTFQLPQFQPTLYFVNTTKAETSSGK 502
Query: 81 FTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAAPARXXXXXXXXXXXXXQ 140
+ L + +L R +G+Y + IP+ LIV +SWVSFW+ EA+PAR
Sbjct: 503 YVRLALEVILVRNMGFYTMNIVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMTTL 562
Query: 141 HAKSQASLPPVSYLKAVDAFMSACTV 166
+ S+P VSY+K +D F++ C V
Sbjct: 563 ITTTNNSMPKVSYVKGLDVFLNFCFV 588
Score = 144 (55.7 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 34/109 (31%), Positives = 53/109 (48%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLR---LPENMT 240
YDK P+ +P V + V + ++ E M + D + QTW+D RL L ++
Sbjct: 47 YDKRLRPRYGEKPVDVGITIHVSSISAVSEVDMDFTLDFYMRQTWQDPRLAFGSLDLGLS 106
Query: 241 SEYRLLEV--DWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTI 287
E L V D+L +W+PD+FF N K F T N ++ + D T+
Sbjct: 107 KEIDSLTVGVDYLDRLWKPDTFFPNEKKSFFHLATTHNSFLRIEGDGTV 155
Score = 57 (25.1 bits), Expect = 7.6e-23, Sum P(3) = 7.6e-23
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIM 387
+ID SR FP++F + N +W++
Sbjct: 1047 HIDIVSRAAFPLVFILFNTLFWLI 1070
Score = 40 (19.1 bits), Expect = 7.6e-23, Sum P(3) = 7.6e-23
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 316 PPEPAKQDKIFELA 329
PP PA+ K F L+
Sbjct: 777 PPVPARHSKTFSLS 790
>UNIPROTKB|F1LWJ7 [details] [associations]
symbol:Gabra6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005436 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236 RGD:61861
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 IPI:IPI00565653 Ensembl:ENSRNOT00000047262
ArrayExpress:F1LWJ7 Uniprot:F1LWJ7
Length = 452
Score = 232 (86.7 bits), Expect = 8.6e-23, Sum P(3) = 8.6e-23
Identities = 52/163 (31%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAV-DEKIELPQL 62
RLT+ C M + +P D C L+ S ++ ++I+ W P + V +E L Q
Sbjct: 148 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 207
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + S TG + + V F L+R++GY++ Y P + VI+S VSFWI E
Sbjct: 208 DLI-GQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKE 266
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP VSY A+D F++ C
Sbjct: 267 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 309
Score = 160 (61.4 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 42/133 (31%), Positives = 58/133 (43%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRL--PENMTS 241
YD P G T V + V + + M Y D+FF QTW D RL+ P + S
Sbjct: 42 YDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFKGPAEILS 101
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEY 301
L+ + +W PD+FF+N K MT PN L ++ TILY ++ A
Sbjct: 102 LNNLM----VSKIWTPDTFFQNGKKSIAHNMTTPNKLFRLMQNGTILYTMRLTINADCPM 157
Query: 302 CLVNIVLGDSDLP 314
LVN + P
Sbjct: 158 RLVNFPMDGHACP 170
Score = 79 (32.9 bits), Expect = 8.6e-23, Sum P(3) = 8.6e-23
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID++SR+ FPV FA N YWI++
Sbjct: 416 IDQYSRILFPVAFAGFNLVYWIVY 439
Score = 41 (19.5 bits), Expect = 8.6e-23, Sum P(3) = 8.6e-23
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 312 FVFSALIEFAAVN 324
>UNIPROTKB|E1BE96 [details] [associations]
symbol:GABRA6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2559
OMA:HSDSKYH EMBL:DAAA02020909 EMBL:DAAA02020910 IPI:IPI00704287
RefSeq:NP_001137557.1 UniGene:Bt.39107 ProteinModelPortal:E1BE96
Ensembl:ENSBTAT00000017637 GeneID:539194 KEGG:bta:539194
NextBio:20877838 Uniprot:E1BE96
Length = 453
Score = 232 (86.7 bits), Expect = 8.8e-23, Sum P(3) = 8.8e-23
Identities = 52/163 (31%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAV-DEKIELPQL 62
RLT+ C M + +P D C L+ S ++ ++I+ W P + V +E L Q
Sbjct: 149 RLTINADCPMKLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + S TG + + V F L+R++GY++ Y P + VI+S VSFWI E
Sbjct: 209 DLI-GQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKE 267
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP VSY A+D F++ C
Sbjct: 268 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 310
Score = 159 (61.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 41/133 (30%), Positives = 58/133 (43%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRL--PENMTS 241
YD P G T V + V + + M Y D+FF QTW D RL+ P + S
Sbjct: 43 YDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFGGPTEILS 102
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEY 301
L+ + +W PD+FF+N K MT PN + ++ TILY ++ A
Sbjct: 103 LNNLM----VSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPM 158
Query: 302 CLVNIVLGDSDLP 314
LVN + P
Sbjct: 159 KLVNFPMDGHACP 171
Score = 79 (32.9 bits), Expect = 8.8e-23, Sum P(3) = 8.8e-23
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID++SR+ FPV FA N YWI++
Sbjct: 417 IDQYSRILFPVAFAGFNLVYWIVY 440
Score = 41 (19.5 bits), Expect = 8.8e-23, Sum P(3) = 8.8e-23
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 313 FVFSALIEFAAVN 325
>RGD|61861 [details] [associations]
symbol:Gabra6 "gamma-aminobutyric acid (GABA) A receptor, alpha 6"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA;IDA] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=IEA] [GO:0005237 "inhibitory
extracellular ligand-gated ion channel activity" evidence=IMP]
[GO:0005254 "chloride channel activity" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IDA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008144 "drug binding" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0032809 "neuronal cell body
membrane" evidence=IDA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IDA]
[GO:0043235 "receptor complex" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA;IDA] [GO:0051291 "protein
heterooligomerization" evidence=IPI] [GO:0051932 "synaptic
transmission, GABAergic" evidence=IMP] [GO:0008503 "benzodiazepine
receptor activity" evidence=IMP] [GO:0022851 "GABA-gated chloride
ion channel activity" evidence=IMP] InterPro:IPR001390
InterPro:IPR005436 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236 RGD:61861
GO:GO:0051291 GO:GO:0005887 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0042734 GO:GO:0043235 GO:GO:0032809
GO:GO:0034707 GO:GO:0005254 GO:GO:0051932 KO:K05175 eggNOG:NOG238757
HOGENOM:HOG000231337 HOVERGEN:HBG051707 GO:GO:0005237 CTD:2559
EMBL:L08495 EMBL:X55742 IPI:IPI00206049 PIR:S11087
RefSeq:NP_068613.1 UniGene:Rn.29890 ProteinModelPortal:P30191
SMR:P30191 STRING:P30191 GeneID:29708 KEGG:rno:29708 UCSC:RGD:61861
BindingDB:P30191 ChEMBL:CHEMBL293 NextBio:610131 ArrayExpress:P30191
Genevestigator:P30191 GermOnline:ENSRNOG00000003569 Uniprot:P30191
Length = 453
Score = 232 (86.7 bits), Expect = 8.8e-23, Sum P(3) = 8.8e-23
Identities = 52/163 (31%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAV-DEKIELPQL 62
RLT+ C M + +P D C L+ S ++ ++I+ W P + V +E L Q
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + S TG + + V F L+R++GY++ Y P + VI+S VSFWI E
Sbjct: 209 DLI-GQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKE 267
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP VSY A+D F++ C
Sbjct: 268 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 310
Score = 159 (61.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 42/133 (31%), Positives = 57/133 (42%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRL--PENMTS 241
YD P G T V + V + + M Y D+FF QTW D RL+ P + S
Sbjct: 43 YDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFKGPAEILS 102
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEY 301
L+ + +W PD+FF+N K MT PN L + TILY ++ A
Sbjct: 103 LNNLM----VSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMHNGTILYTMRLTINADCPM 158
Query: 302 CLVNIVLGDSDLP 314
LVN + P
Sbjct: 159 RLVNFPMDGHACP 171
Score = 79 (32.9 bits), Expect = 8.8e-23, Sum P(3) = 8.8e-23
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID++SR+ FPV FA N YWI++
Sbjct: 417 IDQYSRILFPVAFAGFNLVYWIVY 440
Score = 41 (19.5 bits), Expect = 8.8e-23, Sum P(3) = 8.8e-23
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 313 FVFSALIEFAAVN 325
>UNIPROTKB|P30191 [details] [associations]
symbol:Gabra6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 RGD:61861 GO:GO:0051291 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0042734
GO:GO:0043235 GO:GO:0032809 GO:GO:0034707 GO:GO:0005254
GO:GO:0051932 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0005237 CTD:2559 EMBL:L08495 EMBL:X55742
IPI:IPI00206049 PIR:S11087 RefSeq:NP_068613.1 UniGene:Rn.29890
ProteinModelPortal:P30191 SMR:P30191 STRING:P30191 GeneID:29708
KEGG:rno:29708 UCSC:RGD:61861 BindingDB:P30191 ChEMBL:CHEMBL293
NextBio:610131 ArrayExpress:P30191 Genevestigator:P30191
GermOnline:ENSRNOG00000003569 Uniprot:P30191
Length = 453
Score = 232 (86.7 bits), Expect = 8.8e-23, Sum P(3) = 8.8e-23
Identities = 52/163 (31%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAV-DEKIELPQL 62
RLT+ C M + +P D C L+ S ++ ++I+ W P + V +E L Q
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + S TG + + V F L+R++GY++ Y P + VI+S VSFWI E
Sbjct: 209 DLI-GQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKE 267
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP VSY A+D F++ C
Sbjct: 268 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 310
Score = 159 (61.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 42/133 (31%), Positives = 57/133 (42%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRL--PENMTS 241
YD P G T V + V + + M Y D+FF QTW D RL+ P + S
Sbjct: 43 YDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFKGPAEILS 102
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEY 301
L+ + +W PD+FF+N K MT PN L + TILY ++ A
Sbjct: 103 LNNLM----VSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMHNGTILYTMRLTINADCPM 158
Query: 302 CLVNIVLGDSDLP 314
LVN + P
Sbjct: 159 RLVNFPMDGHACP 171
Score = 79 (32.9 bits), Expect = 8.8e-23, Sum P(3) = 8.8e-23
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID++SR+ FPV FA N YWI++
Sbjct: 417 IDQYSRILFPVAFAGFNLVYWIVY 440
Score = 41 (19.5 bits), Expect = 8.8e-23, Sum P(3) = 8.8e-23
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 313 FVFSALIEFAAVN 325
>UNIPROTKB|E7EV53 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HGNC:HGNC:4080
EMBL:AC091989 EMBL:AC091944 IPI:IPI00984249
ProteinModelPortal:E7EV53 SMR:E7EV53 Ensembl:ENST00000523217
ArrayExpress:E7EV53 Bgee:E7EV53 Uniprot:E7EV53
Length = 443
Score = 232 (86.7 bits), Expect = 9.0e-23, Sum P(3) = 9.0e-23
Identities = 52/163 (31%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAV-DEKIELPQL 62
RLT+ C M + +P D C L+ S ++ ++I+ W P + V +E L Q
Sbjct: 139 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 198
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + S TG + + V F L+R++GY++ Y P + VI+S VSFWI E
Sbjct: 199 DLI-GQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKE 257
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP VSY A+D F++ C
Sbjct: 258 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 300
Score = 108 (43.1 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 28/90 (31%), Positives = 41/90 (45%)
Query: 227 TWKDHRLRL--PENMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKD 284
TW D RL+ P + S L+ + +W PD+FF+N K MT PN + ++
Sbjct: 76 TWTDERLKFGGPTEILSLNNLM----VSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQN 131
Query: 285 KTILYMVKFVFMALMEYCLVNIVLGDSDLP 314
TILY ++ A LVN + P
Sbjct: 132 GTILYTMRLTINADCPMRLVNFPMDGHACP 161
Score = 78 (32.5 bits), Expect = 9.0e-23, Sum P(3) = 9.0e-23
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID++SR+ FPV FA N YW+++
Sbjct: 407 IDQYSRILFPVAFAGFNLVYWVVY 430
Score = 41 (19.5 bits), Expect = 9.0e-23, Sum P(3) = 9.0e-23
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 303 FVFSALIEFAAVN 315
>UNIPROTKB|P31644 [details] [associations]
symbol:GABRA5 "Gamma-aminobutyric acid receptor subunit
alpha-5" species:9606 "Homo sapiens" [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IEA]
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0032809 "neuronal cell body membrane" evidence=IEA] [GO:0043235
"receptor complex" evidence=IEA] [GO:0050811 "GABA receptor
binding" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0060384 "innervation" evidence=IEA]
[GO:0090102 "cochlea development" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=TAS] [GO:0005215 "transporter activity"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0034220 "ion transmembrane transport" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_13685
Reactome:REACT_15518 InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0007165 GO:GO:0007420 GO:GO:0005887
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0005230
GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220 GO:GO:0007214
GO:GO:0030425 GO:GO:0004872 GO:GO:0005215 GO:GO:0008306
GO:GO:0007605 GO:GO:0032809 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 GO:GO:0090102 DrugBank:DB00683
DrugBank:DB01544 DrugBank:DB00404 GO:GO:0060119 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
DrugBank:DB00189 DrugBank:DB00690 DrugBank:DB00371
OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384 EMBL:L08485 EMBL:AK290453
EMBL:BT009830 EMBL:BC111979 EMBL:BC113422 EMBL:AF061785
EMBL:AF228447 EMBL:AF228448 EMBL:AF228449 IPI:IPI00012471
PIR:A48933 RefSeq:NP_000801.1 RefSeq:NP_001158509.1
UniGene:Hs.24969 ProteinModelPortal:P31644 SMR:P31644 STRING:P31644
PhosphoSite:P31644 DMDM:399519 PaxDb:P31644 PRIDE:P31644 DNASU:2558
Ensembl:ENST00000335625 Ensembl:ENST00000355395
Ensembl:ENST00000400081 GeneID:2558 KEGG:hsa:2558 UCSC:uc001zbd.2
GeneCards:GC15P027112 HGNC:HGNC:4079 MIM:137142 neXtProt:NX_P31644
PharmGKB:PA28493 InParanoid:P31644 OMA:WTNGTTK PhylomeDB:P31644
BindingDB:P31644 ChEMBL:CHEMBL5112 GenomeRNAi:2558 NextBio:10103
ArrayExpress:P31644 Bgee:P31644 CleanEx:HS_GABRA5
Genevestigator:P31644 GermOnline:ENSG00000186297 Uniprot:P31644
Length = 462
Score = 228 (85.3 bits), Expect = 9.6e-23, Sum P(3) = 9.6e-23
Identities = 48/163 (29%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW---DPEMPLAVDEKIELPQL 62
RLT+ C M +P D C L+ S ++ ++++ W + + ++ L Q
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQY 225
Query: 63 QLVKNKTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + STG +T + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 226 HLM-GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 284
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 285 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 327
Score = 155 (59.6 bits), Expect = 2.5e-13, Sum P(3) = 2.5e-13
Identities = 41/116 (35%), Positives = 57/116 (49%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++RP E + T V + V + + M Y D+FF Q+WKD RLR M
Sbjct: 60 YDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQ-- 116
Query: 243 YRLLEVDWLKN-MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + L + +W PD+FF N K MT PN + L D T+LY ++ A
Sbjct: 117 -RLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISA 171
Score = 73 (30.8 bits), Expect = 9.6e-23, Sum P(3) = 9.6e-23
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+ SR+ FPVLF N YW +
Sbjct: 425 IDKMSRIVFPVLFGTFNLVYWATY 448
Score = 53 (23.7 bits), Expect = 9.6e-23, Sum P(3) = 9.6e-23
Identities = 20/58 (34%), Positives = 26/58 (44%)
Query: 293 FVFMALMEYCLVNIVLGDS---DLPKPPEPAKQDKIFELAAKENARLLT-GQPMIPPN 346
FVF AL+E+ VN D K E AK K E+ ++ T G+ PPN
Sbjct: 330 FVFSALIEFATVNYFTKRGWAWDGKKALEAAKIKKKREVILNKSTNAFTTGKMSHPPN 387
>UNIPROTKB|E2QVM5 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
CTD:2564 KO:K05185 OMA:LYTIRMT EMBL:AAEX03027052 RefSeq:XP_549340.3
Ensembl:ENSCAFT00000030414 GeneID:492220 KEGG:cfa:492220
NextBio:20864837 Uniprot:E2QVM5
Length = 488
Score = 248 (92.4 bits), Expect = 9.7e-23, Sum P(2) = 9.7e-23
Identities = 48/163 (29%), Positives = 84/163 (51%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+T+ C + + +P D+ C L S S+ ++I++W+ L +DE+ Q
Sbjct: 183 RMTIDAGCLLYMLKFPMDSHSCPLSFSSFSYPESEMIYKWE-NFKLQIDERNTWKLFQFD 241
Query: 66 KNKTADCSQVYST--GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ ++ ST G+FT + + F + RR G+ F Y+P+ + ++SWVSFWIK ++A
Sbjct: 242 FTGVTNTTETISTPAGDFTVMTLYFNVSRRFGFVAFQNYVPSSVTTMLSWVSFWIKRDSA 301
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
PAR S+ + P VSY+ A+D +++ C V
Sbjct: 302 PARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFV 344
Score = 177 (67.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 42/115 (36%), Positives = 62/115 (53%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD K+RP E +PT+V ++V L I M Y DI F QTW D RLR N + E
Sbjct: 77 YDHKLRPGIGE-RPTVVTVELSVNTLGPISIMDMEYTIDITFCQTWYDERLRY--NGSFE 133
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+L + + +W PD+ F+N+K +T+PN V ++KD +LY ++ A
Sbjct: 134 SFVLNGNMVSQLWIPDTVFRNSKRTQEHVITMPNQMVRIHKDGKVLYTIRMTIDA 188
Score = 69 (29.3 bits), Expect = 9.7e-23, Sum P(2) = 9.7e-23
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIM 387
+D +SRV FPV F N YW++
Sbjct: 462 LDNYSRVIFPVTFFFFNVLYWLV 484
>UNIPROTKB|Q16445 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0006810 "transport"
evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0008503 "benzodiazepine receptor activity" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0034220 "ion transmembrane
transport" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005436 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619 PROSITE:PS00236
GO:GO:0005887 EMBL:CH471062 GO:GO:0008144 GO:GO:0030054
GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0034220
GO:GO:0007214 GO:GO:0030425 GO:GO:0042734 GO:GO:0043083
GO:GO:0043235 GO:GO:0032809 GO:GO:0034707 GO:GO:0005254
DrugBank:DB00186 GO:GO:0051932 DrugBank:DB00683 DrugBank:DB01544
DrugBank:DB00404 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 GO:GO:0005237 OrthoDB:EOG4MPHQ4
CTD:2559 OMA:HSDSKYH EMBL:S81944 EMBL:AK289461 EMBL:BC096241
EMBL:BC096242 EMBL:BC099640 EMBL:BC099641 IPI:IPI00002215
RefSeq:NP_000802.2 UniGene:Hs.90791 ProteinModelPortal:Q16445
SMR:Q16445 STRING:Q16445 PhosphoSite:Q16445 DMDM:126302548
PRIDE:Q16445 Ensembl:ENST00000274545 GeneID:2559 KEGG:hsa:2559
UCSC:uc003lyu.2 GeneCards:GC05P161045 H-InvDB:HIX0005382
HGNC:HGNC:4080 MIM:137143 neXtProt:NX_Q16445 PharmGKB:PA28494
InParanoid:Q16445 PhylomeDB:Q16445 BindingDB:Q16445
ChEMBL:CHEMBL2579 GenomeRNAi:2559 NextBio:10107 ArrayExpress:Q16445
Bgee:Q16445 CleanEx:HS_GABRA6 Genevestigator:Q16445
GermOnline:ENSG00000145863 GO:GO:0022851 Uniprot:Q16445
Length = 453
Score = 232 (86.7 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 52/163 (31%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAV-DEKIELPQL 62
RLT+ C M + +P D C L+ S ++ ++I+ W P + V +E L Q
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + S TG + + V F L+R++GY++ Y P + VI+S VSFWI E
Sbjct: 209 DLI-GQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKE 267
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP VSY A+D F++ C
Sbjct: 268 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 310
Score = 159 (61.0 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 41/133 (30%), Positives = 58/133 (43%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRL--PENMTS 241
YD P G T V + V + + M Y D+FF QTW D RL+ P + S
Sbjct: 43 YDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFGGPTEILS 102
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEY 301
L+ + +W PD+FF+N K MT PN + ++ TILY ++ A
Sbjct: 103 LNNLM----VSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPM 158
Query: 302 CLVNIVLGDSDLP 314
LVN + P
Sbjct: 159 RLVNFPMDGHACP 171
Score = 78 (32.5 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID++SR+ FPV FA N YW+++
Sbjct: 417 IDQYSRILFPVAFAGFNLVYWVVY 440
Score = 41 (19.5 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 313 FVFSALIEFAAVN 325
>MGI|MGI:95618 [details] [associations]
symbol:Gabra6 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 6" species:10090 "Mus musculus" [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005237 "inhibitory extracellular
ligand-gated ion channel activity" evidence=ISO] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008144 "drug binding" evidence=ISO]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0022851 "GABA-gated chloride ion
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO] [GO:0032809
"neuronal cell body membrane" evidence=ISO] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0043235 "receptor complex" evidence=ISO]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=ISO] [GO:0051291 "protein heterooligomerization"
evidence=ISO] [GO:0051932 "synaptic transmission, GABAergic"
evidence=ISO] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 MGI:MGI:95618 GO:GO:0005887 GO:GO:0008144
GO:GO:0030054 GO:GO:0045211 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0042734
GO:GO:0043083 GO:GO:0043235 GO:GO:0032809 GO:GO:0034707
GO:GO:0005254 GO:GO:0051932 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 GO:GO:0008503 GO:GO:0005237 OrthoDB:EOG4MPHQ4
CTD:2559 OMA:HSDSKYH GO:GO:0022851 EMBL:X51986 EMBL:U77411
EMBL:U77409 EMBL:U77410 EMBL:AF256197 EMBL:AF256198 EMBL:AK135145
EMBL:AL645823 EMBL:BC145158 EMBL:BC145702 IPI:IPI00133501
IPI:IPI00648214 IPI:IPI00857474 IPI:IPI01008575 PIR:S11396
RefSeq:NP_001093111.1 RefSeq:NP_032094.2 UniGene:Mm.4915
ProteinModelPortal:P16305 SMR:P16305 STRING:P16305
PhosphoSite:P16305 PRIDE:P16305 Ensembl:ENSMUST00000020703
Ensembl:ENSMUST00000109286 Ensembl:ENSMUST00000155218 GeneID:14399
KEGG:mmu:14399 InParanoid:Q5SUU5 BindingDB:P16305 ChEMBL:CHEMBL4710
NextBio:285939 Bgee:P16305 Genevestigator:P16305
GermOnline:ENSMUSG00000020428 Uniprot:P16305
Length = 453
Score = 231 (86.4 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 52/163 (31%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD--PEMPLAV-DEKIELPQL 62
RLT+ C M + +P D C L+ S ++ ++I+ W P + V +E L Q
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKTEIIYTWKKGPLYSVEVPEESSSLLQY 208
Query: 63 QLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + S TG + + V F L+R++GY++ Y P + VI+S VSFWI E
Sbjct: 209 DLI-GQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKE 267
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP VSY A+D F++ C
Sbjct: 268 SVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 310
Score = 161 (61.7 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 42/133 (31%), Positives = 58/133 (43%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRL--PENMTS 241
YD P G T V + V + + M Y D+FF QTW D RL+ P + S
Sbjct: 43 YDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFKGPAEILS 102
Query: 242 EYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEY 301
L+ + +W PD+FF+N K MT PN L ++ TILY ++ A
Sbjct: 103 LNNLM----VSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTMRLTINADCPM 158
Query: 302 CLVNIVLGDSDLP 314
LVN + P
Sbjct: 159 RLVNFPMDGHACP 171
Score = 79 (32.9 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID++SR+ FPV FA N YWI++
Sbjct: 417 IDQYSRILFPVAFAGFNLVYWIVY 440
Score = 41 (19.5 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 313 FVFSALIEFAAVN 325
>UNIPROTKB|P10064 [details] [associations]
symbol:GABRA3 "Gamma-aminobutyric acid receptor subunit
alpha-3" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005433 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01616 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 EMBL:X12362 IPI:IPI00704308 PIR:S12511
RefSeq:NP_776967.1 UniGene:Bt.175 ProteinModelPortal:P10064
GeneID:282237 KEGG:bta:282237 CTD:2556 InParanoid:P10064
OrthoDB:EOG4X0MSC BindingDB:P10064 ChEMBL:CHEMBL3628
NextBio:20806056 Uniprot:P10064
Length = 492
Score = 231 (86.4 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW----DPEMPLAVDEKIELPQ 61
RLT+ C M+ +P D C L+ S ++TT ++++ W + + +A D L Q
Sbjct: 184 RLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGS-RLNQ 242
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ + STG + + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 243 YDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 302
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D FM+ C
Sbjct: 303 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVC 345
Score = 148 (57.2 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
Identities = 41/134 (30%), Positives = 60/134 (44%)
Query: 167 SSTSLT-FNDILPEDPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFA 225
S+ ++T F IL YD P T V + V + + M Y D+FF
Sbjct: 60 STDNITIFTRILDRLLDGYDNRLRPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFR 119
Query: 226 QTWKDHRLRLPENMTSEYRLLEVDWL--KNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYK 283
QTW D RL+ M ++L ++ L +W PD+FF N K MT PN + L
Sbjct: 120 QTWHDERLKFDGPM----KILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVD 175
Query: 284 DKTILYMVKFVFMA 297
+ T+LY ++ A
Sbjct: 176 NGTLLYTMRLTIHA 189
Score = 82 (33.9 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
+D+ SR+ FPVLFAI N YW +
Sbjct: 455 VDKISRIIFPVLFAIFNLVYWATY 478
Score = 41 (19.5 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 348 FVFSALIEFATVN 360
>UNIPROTKB|F1PEH3 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 KO:K05175 GeneTree:ENSGT00550000074441 CTD:2555
OMA:TTAEPNK EMBL:AAEX03009033 RefSeq:XP_858923.2
Ensembl:ENSCAFT00000002984 GeneID:482131 KEGG:cfa:482131
Uniprot:F1PEH3
Length = 442
Score = 232 (86.7 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW----DPEMPLAVDEKIELPQ 61
RLT++ C M+ +P D C L+ S ++TT ++ + W + +A D L Q
Sbjct: 150 RLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS-RLNQ 208
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ + STG +T + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 209 YDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 268
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 269 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 311
Score = 160 (61.4 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 36/114 (31%), Positives = 52/114 (45%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P T V+ ++ V + + M Y D+FF Q WKD RL+ M
Sbjct: 44 YDNRLRPGLGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNI-L 102
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + +W PD+FF N K MT+PN + + D T+LY ++ A
Sbjct: 103 RLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQA 155
Score = 76 (31.8 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR SR+ FPVLF N YW +
Sbjct: 408 IDRMSRIVFPVLFGTFNLVYWATY 431
Score = 41 (19.5 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 314 FVFSALIEFATVN 326
>WB|WBGene00020657 [details] [associations]
symbol:lgc-53 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314 EMBL:FO080492
RefSeq:NP_741945.3 ProteinModelPortal:H2KYN9 SMR:H2KYN9
EnsemblMetazoa:T21F2.1a GeneID:188702 KEGG:cel:CELE_T21F2.1
CTD:188702 WormBase:T21F2.1a OMA:FTAFNIF Uniprot:H2KYN9
Length = 497
Score = 255 (94.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 56/163 (34%), Positives = 86/163 (52%)
Query: 5 YRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDD--LIFQ-WDPEMPLAVDEKIELPQ 61
+R++L C ++ +P D Q C+L ES S+ T + ++++ WD D K LP
Sbjct: 203 FRVSLTGPCKLDLTYFPMDRQSCNLVFESYSYNTAEVRIVWRDWDAVTIPDPDSK-NLPD 261
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
+LV + + + VY+ G + LEV F +R GYY+ Y+PT L V +SW++FWI +
Sbjct: 262 FELVNIEHMNATLVYTAGLWDQLEVKFTFRRLYGYYVLQAYMPTYLSVFISWIAFWIDTK 321
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
A PAR Q +LP VSY+KA+D +M C
Sbjct: 322 ALPARITLGVSSLMALTFQFGNIVKNLPRVSYVKALDIWMFGC 364
Score = 123 (48.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 38/127 (29%), Positives = 58/127 (45%)
Query: 164 CTVSSTSLTFNDILPE--DPKLYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAAD 221
CT + +L N +L E D YDK P IV +TV + I E S ++ AD
Sbjct: 77 CTAINETLRKN-LLQELFDDS-YDKNNLPSANSTEVIV--ELTVQSITEISEFSSSFKAD 132
Query: 222 IFFAQTWKDHRLRLPE-NMTSEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVW 280
++F+Q W+D RL + N + L L MW P+ F N+K V N +
Sbjct: 133 VWFSQIWRDPRLDFSDRNYCLKNISLASHKLPTMWSPNVCFVNSKKVEIHASPSQNILLL 192
Query: 281 LYKDKTI 287
++ + T+
Sbjct: 193 IFPNGTV 199
Score = 57 (25.1 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID S FP+LF N YW +
Sbjct: 466 IDEISAKLFPLLFTAFNIFYWFYY 489
>UNIPROTKB|P47869 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030285 "integral to synaptic vesicle membrane"
evidence=IDA] [GO:0006836 "neurotransmitter transport"
evidence=IMP] [GO:0008503 "benzodiazepine receptor activity"
evidence=IMP] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IMP] [GO:0001505 "regulation of neurotransmitter
levels" evidence=IMP] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0034220 "ion
transmembrane transport" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_13685 Reactome:REACT_15518
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0034220 GO:GO:0007214 MIM:103780 GO:GO:0006836 GO:GO:0034707
GO:GO:0005254 DrugBank:DB00186 GO:GO:0001505 DrugBank:DB00829
DrugBank:DB00683 DrugBank:DB01544 DrugBank:DB00404 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4ZS935 DrugBank:DB00189 DrugBank:DB00690
DrugBank:DB00371 GO:GO:0008503 CTD:2555 EMBL:S62907 EMBL:AB209295
IPI:IPI00026631 PIR:I57947 RefSeq:NP_000798.2 RefSeq:NP_001107647.1
UniGene:Hs.116250 ProteinModelPortal:P47869 SMR:P47869
IntAct:P47869 STRING:P47869 TCDB:1.A.9.5.2 PhosphoSite:P47869
DMDM:126302547 PaxDb:P47869 PRIDE:P47869 Ensembl:ENST00000356504
Ensembl:ENST00000381620 Ensembl:ENST00000510861
Ensembl:ENST00000514090 GeneID:2555 KEGG:hsa:2555 UCSC:uc003gxc.3
GeneCards:GC04M046167 HGNC:HGNC:4076 HPA:HPA014261 MIM:137140
neXtProt:NX_P47869 PharmGKB:PA28490 InParanoid:P47869
PhylomeDB:P47869 BindingDB:P47869 ChEMBL:CHEMBL4956 ChiTaRS:GABRA2
DrugBank:DB01558 DrugBank:DB01567 GenomeRNAi:2555 NextBio:10091
ArrayExpress:P47869 Bgee:P47869 CleanEx:HS_GABRA2
Genevestigator:P47869 GermOnline:ENSG00000151834 Uniprot:P47869
Length = 451
Score = 232 (86.7 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW----DPEMPLAVDEKIELPQ 61
RLT++ C M+ +P D C L+ S ++TT ++ + W + +A D L Q
Sbjct: 159 RLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS-RLNQ 217
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ + STG +T + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 218 YDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 277
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 278 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 320
Score = 160 (61.4 bits), Expect = 4.7e-13, Sum P(3) = 4.7e-13
Identities = 36/114 (31%), Positives = 52/114 (45%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P T V+ ++ V + + M Y D+FF Q WKD RL+ M
Sbjct: 53 YDNRLRPGLGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNI-L 111
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + +W PD+FF N K MT+PN + + D T+LY ++ A
Sbjct: 112 RLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQA 164
Score = 76 (31.8 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR SR+ FPVLF N YW +
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATY 440
Score = 41 (19.5 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 323 FVFSALIEFATVN 335
>MGI|MGI:95614 [details] [associations]
symbol:Gabra2 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 2" species:10090 "Mus musculus" [GO:0001505
"regulation of neurotransmitter levels" evidence=ISO] [GO:0004890
"GABA-A receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0006836 "neurotransmitter transport" evidence=ISO] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=ISO]
[GO:0008503 "benzodiazepine receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030285 "integral to synaptic vesicle membrane" evidence=ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0034707 "chloride channel
complex" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
MGI:MGI:95614 GO:GO:0005886 GO:GO:0030285 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0030424 GO:GO:0007214 GO:GO:0006836
GO:GO:0034707 GO:GO:0005254 GO:GO:0001505 KO:K05175
eggNOG:NOG238757 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4ZS935 GO:GO:0008503 CTD:2555 EMBL:M86567
IPI:IPI00110598 RefSeq:NP_032092.1 UniGene:Mm.5304
ProteinModelPortal:P26048 SMR:P26048 STRING:P26048
PhosphoSite:P26048 PaxDb:P26048 PRIDE:P26048
Ensembl:ENSMUST00000000572 GeneID:14395 KEGG:mmu:14395
InParanoid:P26048 OMA:TTAEPNK BindingDB:P26048 ChEMBL:CHEMBL2705
NextBio:285927 Bgee:P26048 Genevestigator:P26048
GermOnline:ENSMUSG00000000560 Uniprot:P26048
Length = 451
Score = 232 (86.7 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW----DPEMPLAVDEKIELPQ 61
RLT++ C M+ +P D C L+ S ++TT ++ + W + +A D L Q
Sbjct: 159 RLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS-RLNQ 217
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ + STG +T + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 218 YDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 277
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 278 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 320
Score = 160 (61.4 bits), Expect = 4.7e-13, Sum P(3) = 4.7e-13
Identities = 36/114 (31%), Positives = 52/114 (45%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P T V+ ++ V + + M Y D+FF Q WKD RL+ M
Sbjct: 53 YDNRLRPGLGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNI-L 111
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + +W PD+FF N K MT+PN + + D T+LY ++ A
Sbjct: 112 RLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQA 164
Score = 76 (31.8 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR SR+ FPVLF N YW +
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATY 440
Score = 41 (19.5 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 323 FVFSALIEFATVN 335
>UNIPROTKB|F1LNE8 [details] [associations]
symbol:Gabra2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0006821 GeneTree:ENSGT00550000074441 OMA:TTAEPNK
IPI:IPI00679252 PRIDE:F1LNE8 Ensembl:ENSRNOT00000003197
ArrayExpress:F1LNE8 Uniprot:F1LNE8
Length = 451
Score = 232 (86.7 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW----DPEMPLAVDEKIELPQ 61
RLT++ C M+ +P D C L+ S ++TT ++ + W + +A D L Q
Sbjct: 159 RLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS-RLNQ 217
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ + STG +T + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 218 YDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 277
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 278 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 320
Score = 155 (59.6 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 36/114 (31%), Positives = 51/114 (44%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P T V ++ V + + M Y D+FF Q WKD RL+ M
Sbjct: 53 YDNRLRPGLGDSITEVSTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNI-L 111
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + +W PD+FF N K MT+PN + + D T+LY ++ A
Sbjct: 112 RLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQA 164
Score = 76 (31.8 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR SR+ FPVLF N YW +
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATY 440
Score = 41 (19.5 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 323 FVFSALIEFATVN 335
>UNIPROTKB|F1LMU7 [details] [associations]
symbol:Gabra2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A
receptor activity" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 RGD:61856
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0001505 GO:GO:0006821 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:0008503 CTD:2555 IPI:IPI00950967
UniGene:Rn.48180 RefSeq:NP_001129251.1 ProteinModelPortal:F1LMU7
PRIDE:F1LMU7 Ensembl:ENSRNOT00000064779 GeneID:289606
KEGG:rno:289606 NextBio:630056 ArrayExpress:F1LMU7 Uniprot:F1LMU7
Length = 452
Score = 232 (86.7 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW----DPEMPLAVDEKIELPQ 61
RLT++ C M+ +P D C L+ S ++TT ++ + W + +A D L Q
Sbjct: 159 RLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS-RLNQ 217
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ + STG +T + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 218 YDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 277
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 278 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 320
Score = 155 (59.6 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 36/114 (31%), Positives = 51/114 (44%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P T V ++ V + + M Y D+FF Q WKD RL+ M
Sbjct: 53 YDNRLRPGLGDSITEVSTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNI-L 111
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + +W PD+FF N K MT+PN + + D T+LY ++ A
Sbjct: 112 RLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQA 164
Score = 76 (31.8 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR SR+ FPVLF N YW +
Sbjct: 418 IDRMSRIVFPVLFGTFNLVYWATY 441
Score = 41 (19.5 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 323 FVFSALIEFATVN 335
>UNIPROTKB|F1SR89 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005435 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0008306 GO:GO:0007605 GO:GO:0001662
GO:GO:0044297 GO:GO:0090102 GO:GO:0006821 GO:GO:0060119 KO:K05175
GeneTree:ENSGT00550000074441 GO:GO:0060384 OMA:WTNGTTK
EMBL:CU861926 RefSeq:XP_003121696.1 UniGene:Ssc.6556
Ensembl:ENSSSCT00000005329 GeneID:100520472 KEGG:ssc:100520472
Uniprot:F1SR89
Length = 463
Score = 227 (85.0 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 48/163 (29%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD---PEMPLAVDEKIELPQL 62
RLT+ C M +P D C L+ S ++ ++++ W + + ++ L Q
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGTTKSVVVAEDGSRLNQY 225
Query: 63 QLVKNKTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + STG +T + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 226 HLM-GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 284
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 285 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 327
Score = 155 (59.6 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 41/116 (35%), Positives = 57/116 (49%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++RP E + T V + V + + M Y D+FF Q+WKD RLR M
Sbjct: 60 YDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQ-- 116
Query: 243 YRLLEVDWLKN-MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + L + +W PD+FF N K MT PN + L D T+LY ++ A
Sbjct: 117 -RLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISA 171
Score = 74 (31.1 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+ SR+ FPVLF N YW +
Sbjct: 426 IDKMSRIIFPVLFGTFNLVYWATY 449
Score = 51 (23.0 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 21/59 (35%), Positives = 27/59 (45%)
Query: 293 FVFMALMEYCLVNIVLGDS---DLPKPPEPAK-QDKIFELAAKENARLLT-GQPMIPPN 346
FVF AL+E+ VN D K E AK + K EL ++ T G+ PPN
Sbjct: 330 FVFSALIEFATVNYFTKRGWAWDGKKALEAAKIKKKERELTLNKSTNAYTTGKMTHPPN 388
>UNIPROTKB|E2RG38 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090102 "cochlea development" evidence=IEA]
[GO:0060384 "innervation" evidence=IEA] [GO:0060119 "inner ear
receptor cell development" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0004890 "GABA-A receptor activity"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0008306
GO:GO:0007605 GO:GO:0001662 GO:GO:0044297 GO:GO:0090102
GO:GO:0006821 GO:GO:0060119 KO:K05175 GeneTree:ENSGT00550000074441
CTD:2558 GO:GO:0060384 OMA:WTNGTTK EMBL:AAEX03002173
EMBL:AAEX03002174 RefSeq:XP_545805.2 ProteinModelPortal:E2RG38
Ensembl:ENSCAFT00000015966 GeneID:488688 KEGG:cfa:488688
NextBio:20861999 Uniprot:E2RG38
Length = 463
Score = 227 (85.0 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 48/163 (29%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD---PEMPLAVDEKIELPQL 62
RLT+ C M +P D C L+ S ++ ++++ W + + ++ L Q
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGTTKSVVVAEDGSRLNQY 225
Query: 63 QLVKNKTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + STG +T + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 226 HLM-GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 284
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 285 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 327
Score = 155 (59.6 bits), Expect = 3.2e-13, Sum P(3) = 3.2e-13
Identities = 41/116 (35%), Positives = 57/116 (49%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++RP E + T V + V + + M Y D+FF Q+WKD RLR M
Sbjct: 60 YDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQ-- 116
Query: 243 YRLLEVDWLKN-MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + L + +W PD+FF N K MT PN + L D T+LY ++ A
Sbjct: 117 -RLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISA 171
Score = 73 (30.8 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+ SR+ FPVLF N YW +
Sbjct: 426 IDKMSRIVFPVLFGTFNLVYWATY 449
Score = 52 (23.4 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 21/59 (35%), Positives = 27/59 (45%)
Query: 293 FVFMALMEYCLVNIVLGDS---DLPKPPEPAK-QDKIFELAAKENARLLT-GQPMIPPN 346
FVF AL+E+ VN D K E AK + K EL ++ T G+ PPN
Sbjct: 330 FVFSALIEFATVNYFTKRGWAWDGKKASEAAKVKKKERELILNKSTNAYTTGKMTHPPN 388
>UNIPROTKB|B7Z1H8 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9606 "Homo sapiens" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005432
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0006821 HOGENOM:HOG000231337
HOVERGEN:HBG051707 UniGene:Hs.116250 HGNC:HGNC:4076 ChiTaRS:GABRA2
EMBL:AC084352 EMBL:AC093745 EMBL:AC095060 EMBL:AC104072
EMBL:AK293466 IPI:IPI00922092 SMR:B7Z1H8 STRING:B7Z1H8
Ensembl:ENST00000540012 UCSC:uc011bzc.1 Uniprot:B7Z1H8
Length = 456
Score = 232 (86.7 bits), Expect = 1.9e-22, Sum P(3) = 1.9e-22
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW----DPEMPLAVDEKIELPQ 61
RLT++ C M+ +P D C L+ S ++TT ++ + W + +A D L Q
Sbjct: 104 RLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS-RLNQ 162
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ + STG +T + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 163 YDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 222
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 223 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 265
Score = 152 (58.6 bits), Expect = 4.4e-12, Sum P(3) = 4.4e-12
Identities = 35/98 (35%), Positives = 50/98 (51%)
Query: 200 YFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEYRLLEVDWLKNMWRPDS 259
++ VT++GLD E Y D+FF Q WKD RL+ M RL + +W PD+
Sbjct: 17 FWMVTIIGLDQDWEE---YTIDVFFRQKWKDERLKFKGPMNI-LRLNNL-MASKIWTPDT 71
Query: 260 FFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
FF N K MT+PN + + D T+LY ++ A
Sbjct: 72 FFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQA 109
Score = 76 (31.8 bits), Expect = 1.9e-22, Sum P(3) = 1.9e-22
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR SR+ FPVLF N YW +
Sbjct: 422 IDRMSRIVFPVLFGTFNLVYWATY 445
Score = 41 (19.5 bits), Expect = 1.9e-22, Sum P(3) = 1.9e-22
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 268 FVFSALIEFATVN 280
Score = 38 (18.4 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 261 FKNAKAVTFQTMTIPNHYV---W--LYKDKTILYMVKFV 294
+ + KA+ I + Y+ W L+++KT+ Y+ K++
Sbjct: 311 YNSVKAILQGAKLIWSKYIAFSWPSLFQEKTLEYLEKWM 349
>UNIPROTKB|F1NXA6 [details] [associations]
symbol:GABRA2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0001505 "regulation of neurotransmitter
levels" evidence=IEA] [GO:0006836 "neurotransmitter transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0008503 "benzodiazepine receptor
activity" evidence=IEA] [GO:0030285 "integral to synaptic vesicle
membrane" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
InterPro:IPR001390 InterPro:IPR005432 InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236
GO:GO:0005886 GO:GO:0030285 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0030424
GO:GO:0007214 GO:GO:0006836 GO:GO:0006821
GeneTree:ENSGT00550000074441 GO:GO:0008503 OMA:TTAEPNK
EMBL:AC147646 IPI:IPI00603099 Ensembl:ENSGALT00000022974
Uniprot:F1NXA6
Length = 458
Score = 232 (86.7 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW----DPEMPLAVDEKIELPQ 61
RLT++ C M+ +P D C L+ S ++TT ++ + W + +A D L Q
Sbjct: 164 RLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS-RLNQ 222
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ + STG +T + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 223 YDLLGQTIGKETVKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 282
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 283 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 325
Score = 160 (61.4 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 36/114 (31%), Positives = 52/114 (45%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P T V+ ++ V + + M Y D+FF Q WKD RL+ M
Sbjct: 58 YDNRLRPGLGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQRWKDERLKFKGPMNI-L 116
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + +W PD+FF N K MT+PN + + D T+LY ++ A
Sbjct: 117 RLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQA 169
Score = 76 (31.8 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR SR+ FPVLF N YW +
Sbjct: 423 IDRMSRIVFPVLFGTFNLVYWATY 446
Score = 41 (19.5 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 328 FVFSALIEFATVN 340
>UNIPROTKB|E1BW42 [details] [associations]
symbol:GABRA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004890 "GABA-A receptor activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0006821 "chloride transport"
evidence=IEA] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0008306
"associative learning" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0044297 "cell body" evidence=IEA] [GO:0060119
"inner ear receptor cell development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0090102 "cochlea development"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425 GO:GO:0044297
GO:GO:0006821 GeneTree:ENSGT00550000074441 EMBL:AC145944
IPI:IPI00812061 ProteinModelPortal:E1BW42
Ensembl:ENSGALT00000027027 OMA:FRTHLLL Uniprot:E1BW42
Length = 464
Score = 230 (86.0 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 50/163 (30%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAV---DEKIELPQL 62
RLT+ C M +P D C L+ S ++ ++I+ W +V ++ L Q
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVIYVWTNSTTTSVVVAEDGSRLNQY 225
Query: 63 QLVKNKTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + STG +T + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 226 HLM-GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 284
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 285 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 327
Score = 155 (59.6 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 41/116 (35%), Positives = 57/116 (49%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++RP E + T V + V + + M Y D+FF Q+WKD RLR M
Sbjct: 60 YDNRLRPGLGE-RITQVKTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQ-- 116
Query: 243 YRLLEVDWLKN-MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + L + +W PD+FF N K MT PN + L D T+LY ++ A
Sbjct: 117 -RLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISA 171
Score = 74 (31.1 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+ SR+ FPVLF N YW +
Sbjct: 427 IDKMSRIIFPVLFGTFNLVYWATY 450
Score = 46 (21.3 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 22/60 (36%), Positives = 25/60 (41%)
Query: 293 FVFMALMEYCLVNIVLGDS---DLPKPPEPAKQDKIFE---LAAKENARLLTGQPMIPPN 346
FVF AL+E+ VN S D K E AK K E L K TG+ PN
Sbjct: 330 FVFSALIEFATVNYFTKRSWAWDGKKALEAAKIKKKKERQLLGNKSTNTYSTGKMTPAPN 389
>UNIPROTKB|F1S2D3 [details] [associations]
symbol:GABRE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR001390 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00540000070314
OMA:LYTIRMT EMBL:FP074856 Ensembl:ENSSSCT00000013944 Uniprot:F1S2D3
Length = 506
Score = 246 (91.7 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 56/206 (27%), Positives = 100/206 (48%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQLV 65
R+T+ C+++ + +P D+ C L S S+ D+I++WD L ++E Q
Sbjct: 189 RMTIDAGCSLHMVKFPMDSHSCPLSFSSFSYPVSDIIYKWD-NFTLEINENNSWKLFQFD 247
Query: 66 KNKTADCSQVYST--GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
++ ++ +T G+F + + F + RR G+ F Y+P+ + ++SW+SFW+K ++A
Sbjct: 248 FTGVSNSTETIATLAGDFMVMTLFFNVSRRFGFVAFQNYVPSSVTTMISWISFWLKKDSA 307
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTVSS----------TSLTF 173
PAR S+ + P VSY+ A+D +++ C V LT+
Sbjct: 308 PARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALMEFAVLNFLTY 367
Query: 174 NDILPE-DPKLYDKMRPPKKEGQPTI 198
N P PKL + ++ GQP I
Sbjct: 368 NRTHPRGSPKLRHEFGGGER-GQPRI 392
Score = 184 (69.8 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 46/132 (34%), Positives = 68/132 (51%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD K+RP E +PT+V ++V L I M Y DI F QTW D RLR N + E
Sbjct: 83 YDYKLRPGIGE-RPTVVTVELSVNTLGPISILDMEYTIDITFYQTWYDERLRY--NGSFE 139
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYC 302
+L + + +W PD+FF+N+K ++T+PN V +YKD +LY ++ A
Sbjct: 140 SFVLNGNLVSLLWVPDTFFRNSKRTQEHSITMPNQMVRIYKDGKVLYTIRMTIDAGCSLH 199
Query: 303 LVNIVLGDSDLP 314
+V + P
Sbjct: 200 MVKFPMDSHSCP 211
Score = 69 (29.3 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIM 387
+D +SRV FPV F N YW++
Sbjct: 480 LDNYSRVIFPVTFFFFNVLYWLV 502
>UNIPROTKB|Q08E50 [details] [associations]
symbol:GABRA5 "Gamma-aminobutyric acid receptor subunit
alpha-5" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0090102 "cochlea development" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060119 "inner ear receptor cell
development" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0008306 "associative
learning" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005435 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0030425
GO:GO:0008306 GO:GO:0007605 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 GO:GO:0044297 GO:GO:0090102 GO:GO:0060119 KO:K05175
eggNOG:NOG238757 GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC EMBL:BC123418 IPI:IPI00701740
RefSeq:NP_001069312.1 UniGene:Bt.63027 ProteinModelPortal:Q08E50
STRING:Q08E50 PRIDE:Q08E50 Ensembl:ENSBTAT00000004397 GeneID:523515
KEGG:bta:523515 CTD:2558 InParanoid:Q08E50 OMA:IRSERIH
NextBio:20873764 GO:GO:0060384 Uniprot:Q08E50
Length = 462
Score = 228 (85.3 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 49/163 (30%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWD---PEMPLAVDEKIELPQL 62
RLT+ C M +P D C L+ S ++ ++I+ W + + ++ L Q
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVIYVWTNGTAKSVVVAEDGSRLNQY 225
Query: 63 QLVKNKTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + STG +T + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 226 HLM-GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 284
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 285 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 327
Score = 155 (59.6 bits), Expect = 6.5e-13, Sum P(3) = 6.5e-13
Identities = 41/116 (35%), Positives = 57/116 (49%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++RP E + T V + V + + M Y D+FF Q+WKD RLR M
Sbjct: 60 YDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQ-- 116
Query: 243 YRLLEVDWLKN-MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + L + +W PD+FF N K MT PN + L D T+LY ++ A
Sbjct: 117 -RLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISA 171
Score = 71 (30.1 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+ SR+ FP+LF N YW +
Sbjct: 425 IDKMSRIIFPLLFGTFNLVYWATY 448
Score = 51 (23.0 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 21/59 (35%), Positives = 27/59 (45%)
Query: 293 FVFMALMEYCLVNIVLGDS---DLPKPPEPAK-QDKIFELAAKENARLLT-GQPMIPPN 346
FVF AL+E+ VN D K E AK + K EL ++ T G+ PPN
Sbjct: 330 FVFSALIEFATVNYFTKRGWAWDGKKALEAAKIKKKERELTINKSTNAYTTGKMTHPPN 388
>MGI|MGI:95617 [details] [associations]
symbol:Gabra5 "gamma-aminobutyric acid (GABA) A receptor,
subunit alpha 5" species:10090 "Mus musculus" [GO:0001662
"behavioral fear response" evidence=IMP] [GO:0004890 "GABA-A
receptor activity" evidence=ISO] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0007605 "sensory perception of sound" evidence=IMP] [GO:0008306
"associative learning" evidence=IMP] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030425 "dendrite"
evidence=ISO;IDA] [GO:0032809 "neuronal cell body membrane"
evidence=ISO] [GO:0034707 "chloride channel complex" evidence=IEA]
[GO:0043235 "receptor complex" evidence=ISO] [GO:0044297 "cell
body" evidence=IDA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0050811 "GABA receptor binding"
evidence=ISO] [GO:0060119 "inner ear receptor cell development"
evidence=IMP] [GO:0060384 "innervation" evidence=IMP] [GO:0090102
"cochlea development" evidence=IMP] InterPro:IPR001390
InterPro:IPR005435 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01618 PROSITE:PS00236 MGI:MGI:95617
GO:GO:0007420 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0030425 GO:GO:0008306 GO:GO:0007605 GO:GO:0032809
GO:GO:0001662 GO:GO:0034707 GO:GO:0005254 GO:GO:0044297
GO:GO:0090102 GO:GO:0060119 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384
OMA:WTNGTTK EMBL:AK038476 EMBL:AK083185 EMBL:BC062112
IPI:IPI00221880 RefSeq:NP_795916.1 UniGene:Mm.273114
ProteinModelPortal:Q8BHJ7 SMR:Q8BHJ7 MINT:MINT-1789015
STRING:Q8BHJ7 PhosphoSite:Q8BHJ7 PRIDE:Q8BHJ7
Ensembl:ENSMUST00000068456 GeneID:110886 KEGG:mmu:110886
UCSC:uc009heb.1 InParanoid:Q8BHJ7 BindingDB:Q8BHJ7
ChEMBL:CHEMBL2304 NextBio:364867 Bgee:Q8BHJ7 Genevestigator:Q8BHJ7
GermOnline:ENSMUSG00000055078 Uniprot:Q8BHJ7
Length = 463
Score = 228 (85.3 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 48/163 (29%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW---DPEMPLAVDEKIELPQL 62
RLT+ C M +P D C L+ S ++ ++++ W + + ++ L Q
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQY 225
Query: 63 QLVKNKTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + STG +T + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 226 HLM-GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 284
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 285 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 327
Score = 155 (59.6 bits), Expect = 6.5e-13, Sum P(3) = 6.5e-13
Identities = 41/116 (35%), Positives = 57/116 (49%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++RP E + T V + V + + M Y D+FF Q+WKD RLR M
Sbjct: 60 YDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQ-- 116
Query: 243 YRLLEVDWLKN-MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + L + +W PD+FF N K MT PN + L D T+LY ++ A
Sbjct: 117 -RLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISA 171
Score = 72 (30.4 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+ SR+ FP+LF N YW +
Sbjct: 426 IDKMSRIVFPILFGTFNLVYWATY 449
Score = 50 (22.7 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 21/59 (35%), Positives = 27/59 (45%)
Query: 293 FVFMALMEYCLVNIVLGDS---DLPKPPEPAK-QDKIFELAAKENARLLT-GQPMIPPN 346
FVF AL+E+ VN D K E AK + K EL ++ T G+ PPN
Sbjct: 330 FVFSALIEFATVNYFTKRGWAWDGKKALEAAKIKKKERELILNKSTNAFTTGKLTHPPN 388
>RGD|61859 [details] [associations]
symbol:Gabra5 "gamma-aminobutyric acid (GABA) A receptor, alpha 5"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0004890 "GABA-A receptor activity"
evidence=IDA] [GO:0005230 "extracellular ligand-gated ion channel
activity" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEP;IMP] [GO:0007420 "brain development" evidence=IEP]
[GO:0007605 "sensory perception of sound" evidence=IEA;ISO]
[GO:0008306 "associative learning" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0032809 "neuronal cell
body membrane" evidence=IDA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0043235 "receptor complex" evidence=IDA]
[GO:0044297 "cell body" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0048666 "neuron development"
evidence=ISO] [GO:0050811 "GABA receptor binding" evidence=IPI]
[GO:0060119 "inner ear receptor cell development" evidence=IEA;ISO]
[GO:0060384 "innervation" evidence=IEA;ISO] [GO:0090102 "cochlea
development" evidence=IEA;ISO] InterPro:IPR001390 InterPro:IPR005435
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01618
PROSITE:PS00236 RGD:61859 GO:GO:0007420 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860
GO:GO:0007214 GO:GO:0030425 GO:GO:0008306 GO:GO:0007605
GO:GO:0043235 GO:GO:0032809 GO:GO:0001662 GO:GO:0034707
GO:GO:0005254 GO:GO:0090102 GO:GO:0060119 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337 HOVERGEN:HBG051707
OrthoDB:EOG4X0MSC CTD:2558 GO:GO:0060384 OMA:WTNGTTK EMBL:X51992
EMBL:L08494 IPI:IPI00325359 PIR:B34130 RefSeq:NP_058991.1
UniGene:Rn.10368 ProteinModelPortal:P19969 MINT:MINT-1783807
STRING:P19969 PhosphoSite:P19969 Ensembl:ENSRNOT00000014573
GeneID:29707 KEGG:rno:29707 UCSC:RGD:61859 InParanoid:P19969
BindingDB:P19969 ChEMBL:CHEMBL300 NextBio:610127
Genevestigator:P19969 GermOnline:ENSRNOG00000010803 Uniprot:P19969
Length = 464
Score = 228 (85.3 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 48/163 (29%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW---DPEMPLAVDEKIELPQL 62
RLT+ C M +P D C L+ S ++ ++++ W + + ++ L Q
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQY 225
Query: 63 QLVKNKTADCSQVY-STGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L+ +T + STG +T + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 226 HLM-GQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 284
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 285 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 327
Score = 155 (59.6 bits), Expect = 6.6e-13, Sum P(3) = 6.6e-13
Identities = 41/116 (35%), Positives = 57/116 (49%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD ++RP E + T V + V + + M Y D+FF Q+WKD RLR M
Sbjct: 60 YDNRLRPGLGE-RITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQ-- 116
Query: 243 YRLLEVDWLKN-MWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + L + +W PD+FF N K MT PN + L D T+LY ++ A
Sbjct: 117 -RLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISA 171
Score = 72 (30.4 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID+ SR+ FP+LF N YW +
Sbjct: 427 IDKMSRIVFPILFGTFNLVYWATY 450
Score = 50 (22.7 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 21/59 (35%), Positives = 27/59 (45%)
Query: 293 FVFMALMEYCLVNIVLGDS---DLPKPPEPAK-QDKIFELAAKENARLLT-GQPMIPPN 346
FVF AL+E+ VN D K E AK + K EL ++ T G+ PPN
Sbjct: 330 FVFSALIEFATVNYFTKRGWAWDGKKALEAAKIKKKERELILNKSTNAFTTGKLTHPPN 388
>UNIPROTKB|F6XRX3 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008101 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01725 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FFHQTWK PANTHER:PTHR18945:SF87 Ensembl:ENSCAFT00000030427
EMBL:AAEX03027062 Uniprot:F6XRX3
Length = 643
Score = 239 (89.2 bits), Expect = 2.8e-22, Sum P(3) = 2.8e-22
Identities = 48/161 (29%), Positives = 86/161 (53%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPE-MPLAVDEKIELPQLQL 64
RLT +C+++ +P D Q C L++ES +T +D++ W+ + EK+ +PQ
Sbjct: 176 RLTTTAACSLDLQKFPLDKQTCKLEVESYGYTVEDIVLYWEGNGNAIQGTEKLHIPQFSF 235
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ KT +V+ TG++ L + F+++R + YL Y PT L ++SW+SFW+ E++
Sbjct: 236 L-GKTMSSKEVFFYTGSYVRLILRFLVQREVTSYLVQIYWPTVLTTVVSWISFWMNYESS 294
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR ++ + LP V+ +KA+D +M C
Sbjct: 295 AARVTVGLTSMLILNAINSHLRDKLPQVACIKAIDIYMVVC 335
Score = 164 (62.8 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 40/117 (34%), Positives = 57/117 (48%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---NMT 240
YD P G P V + V ++ I E +M Y +FF QTWKD RL E N+T
Sbjct: 70 YDVRLRPNFGGAPVPVGVSMYVSSIEQISEMTMDYTITMFFHQTWKDPRLAYHETDLNLT 129
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+YR+LE +W PD +F N+K +T+ N L+ D T+ Y ++ A
Sbjct: 130 LDYRMLE-----KLWVPDCYFLNSKDAFVHDVTVENRVFQLHPDGTVRYGMRLTTTA 181
Score = 69 (29.3 bits), Expect = 2.8e-22, Sum P(3) = 2.8e-22
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 365 IDRFSRVFFPVLFAILNCTYW 385
+D++SR+ FP+ F + N YW
Sbjct: 618 VDKWSRILFPLAFVVFNIVYW 638
Score = 47 (21.6 bits), Expect = 2.8e-22, Sum P(3) = 2.8e-22
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 288 LYMVK---FVFMALMEYCLVN 305
+YMV FVF++L+EY +N
Sbjct: 330 IYMVVCFLFVFLSLLEYVYIN 350
>WB|WBGene00013517 [details] [associations]
symbol:lgc-52 species:6239 "Caenorhabditis elegans"
[GO:0006811 "ion transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR006028
InterPro:IPR006029 InterPro:IPR006201 InterPro:IPR006202
InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252
PRINTS:PR00253 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 Gene3D:2.70.170.10
PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
GeneTree:ENSGT00540000070314 HOGENOM:HOG000016259 EMBL:AL132862
RefSeq:NP_502839.2 UniGene:Cel.28442 ProteinModelPortal:Q9NA62
SMR:Q9NA62 EnsemblMetazoa:Y73F8A.2 GeneID:190669
KEGG:cel:CELE_Y73F8A.2 UCSC:Y73F8A.2 CTD:190669 WormBase:Y73F8A.2
eggNOG:NOG86111 InParanoid:Q9NA62 OMA:PNILLMI NextBio:946574
Uniprot:Q9NA62
Length = 434
Score = 244 (91.0 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 55/184 (29%), Positives = 88/184 (47%)
Query: 5 YRLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLA-VDEKIELPQLQ 63
YR+ + C MN +P D+ CSL ES S+ D+ QW P++ V LP +
Sbjct: 173 YRIRSEAPCQMNLRNFPLDSIRCSLVFESYSYNAADVELQWLEWSPVSTVRNDYNLPDFR 232
Query: 64 LVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ ++ Y+ G + L V +R G+Y+ Y+PT + V +SW++FW+ +A
Sbjct: 233 MTNITYGSVTEAYTAGMWHRLSVSIHFERLYGFYILQMYLPTYISVFISWIAFWMDTKAL 292
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACT-VSSTSLTFNDILPEDPK 182
PAR Q SLP SY+KA+D +M +C SL I+ + K
Sbjct: 293 PARITLSVSSLMALTFQFGNIVKSLPKASYVKAIDIWMFSCVGFIFFSLIELAIVAYNDK 352
Query: 183 LYDK 186
++D+
Sbjct: 353 MHDQ 356
Score = 67 (28.6 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 364 NIDRFSRVFFPVLFAILNCTYWIMF 388
+IDR + + FP +FA+ N YW +
Sbjct: 400 SIDRVASMLFPTMFALFNLVYWAYY 424
>UNIPROTKB|E2QVJ3 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008101 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01725 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 PANTHER:PTHR18945:SF87
Ensembl:ENSCAFT00000030427 Uniprot:E2QVJ3
Length = 649
Score = 239 (89.2 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 48/161 (29%), Positives = 86/161 (53%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPE-MPLAVDEKIELPQLQL 64
RLT +C+++ +P D Q C L++ES +T +D++ W+ + EK+ +PQ
Sbjct: 176 RLTTTAACSLDLQKFPLDKQTCKLEVESYGYTVEDIVLYWEGNGNAIQGTEKLHIPQFSF 235
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ KT +V+ TG++ L + F+++R + YL Y PT L ++SW+SFW+ E++
Sbjct: 236 L-GKTMSSKEVFFYTGSYVRLILRFLVQREVTSYLVQIYWPTVLTTVVSWISFWMNYESS 294
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
AR ++ + LP V+ +KA+D +M C
Sbjct: 295 AARVTVGLTSMLILNAINSHLRDKLPQVACIKAIDIYMVVC 335
Score = 164 (62.8 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 40/117 (34%), Positives = 57/117 (48%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---NMT 240
YD P G P V + V ++ I E +M Y +FF QTWKD RL E N+T
Sbjct: 70 YDVRLRPNFGGAPVPVGVSMYVSSIEQISEMTMDYTITMFFHQTWKDPRLAYHETDLNLT 129
Query: 241 SEYRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
+YR+LE +W PD +F N+K +T+ N L+ D T+ Y ++ A
Sbjct: 130 LDYRMLE-----KLWVPDCYFLNSKDAFVHDVTVENRVFQLHPDGTVRYGMRLTTTA 181
Score = 69 (29.3 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 365 IDRFSRVFFPVLFAILNCTYW 385
+D++SR+ FP+ F + N YW
Sbjct: 624 VDKWSRILFPLAFVVFNIVYW 644
Score = 47 (21.6 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 288 LYMVK---FVFMALMEYCLVN 305
+YMV FVF++L+EY +N
Sbjct: 330 IYMVVCFLFVFLSLLEYVYIN 350
>UNIPROTKB|F1S2D2 [details] [associations]
symbol:GABRQ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005230 "extracellular ligand-gated ion channel activity"
evidence=IEA] [GO:0004890 "GABA-A receptor activity" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008101 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01725 PROSITE:PS00236 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GeneTree:ENSGT00630000089685
OMA:FFHQTWK PANTHER:PTHR18945:SF87 EMBL:CU468868
Ensembl:ENSSSCT00000013945 Uniprot:F1S2D2
Length = 655
Score = 249 (92.7 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
Identities = 56/194 (28%), Positives = 97/194 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPE-MPLAVDEKIELPQLQL 64
RLT +C+MN +P D Q C L++ES +T +D++ W+ + EK+ +PQ
Sbjct: 176 RLTTTAACSMNLQNFPLDKQTCKLEVESYGYTVEDILLYWEGNGNAIQGTEKLHIPQFSF 235
Query: 65 VKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPEAA 123
+ KT +V+ TG++ L + F++KR + YL Y PT L ++SW+SFW+ E +
Sbjct: 236 L-GKTMTSKEVFFYTGSYVRLILRFLVKREIISYLVQIYWPTVLTTVVSWISFWMNYECS 294
Query: 124 PARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKL 183
AR ++ LP ++ +KA+D +M C L+ + + +
Sbjct: 295 AARVTVGLTSMLILNAINSHLWDKLPQIACIKAIDIYMVVCFFF-VFLSLMEYIYINYLF 353
Query: 184 YDKMRPPKKEGQPT 197
Y + RP + + Q T
Sbjct: 354 YSRRRPRRSKRQLT 367
Score = 175 (66.7 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 51/171 (29%), Positives = 75/171 (43%)
Query: 141 HAKSQASLPPVSYLKAVDAFMSACTVSSTSLTFNDILPEDPKLYDKMRPPKKEGQPTIVY 200
H + +++P V +D F +C + + IL YD P G P V
Sbjct: 33 HFELSSTVPEV----VLDLF--SCKNCANEAVVHKILDRVLSKYDVRLRPNFGGAPVPVG 86
Query: 201 FHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPE---NMTSEYRLLEVDWLKNMWRP 257
+ V ++ I E +M Y +FF QTWKD RL E N+T +YR+LE +W P
Sbjct: 87 VSIYVSSIEQISEMTMDYTITMFFHQTWKDPRLAYYETNLNLTLDYRMLE-----KLWVP 141
Query: 258 DSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCLVNIVL 308
D +F N+K +T+ N L D T+ Y ++ A L N L
Sbjct: 142 DCYFLNSKDAFVHDVTVENRVFQLQPDGTVRYGIRLTTTAACSMNLQNFPL 192
Score = 68 (29.0 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 365 IDRFSRVFFPVLFAILNCTYW 385
IDR SR+ FP+ F + N YW
Sbjct: 630 IDRCSRILFPLAFVMFNVVYW 650
>UNIPROTKB|Q90845 [details] [associations]
symbol:GABRA6 "Gamma-aminobutyric acid receptor subunit
alpha-6" species:9031 "Gallus gallus" [GO:0004890 "GABA-A receptor
activity" evidence=IEA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric
acid signaling pathway" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001390 InterPro:IPR005436
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR018000 Pfam:PF02931 Pfam:PF02932
PRINTS:PR00252 PRINTS:PR00253 PRINTS:PR01079 PRINTS:PR01619
PROSITE:PS00236 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0005230 GO:GO:0004890 Gene3D:2.70.170.10 PANTHER:PTHR18945
SUPFAM:SSF90112 SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214
GO:GO:0034707 GO:GO:0005254 KO:K05175 eggNOG:NOG238757
GeneTree:ENSGT00550000074441 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4MPHQ4 EMBL:X94343 IPI:IPI00571969
RefSeq:NP_990389.1 UniGene:Gga.550 ProteinModelPortal:Q90845
SMR:Q90845 Ensembl:ENSGALT00000002601 GeneID:395931 KEGG:gga:395931
CTD:2559 InParanoid:Q90845 OMA:HSDSKYH NextBio:20815996
Uniprot:Q90845
Length = 465
Score = 229 (85.7 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 53/164 (32%), Positives = 83/164 (50%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPL-AVD---EKIELPQ 61
RLT+ C M + +P D C L+ S ++ ++I+ W + PL +V+ E L Q
Sbjct: 149 RLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWK-KGPLHSVEVPQESSSLLQ 207
Query: 62 LQLVKNKTADCSQVYS-TGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKP 120
L+ +T + S TG + + V F L+R++GY++ Y P + VI+S VSFWI
Sbjct: 208 YDLI-GQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINK 266
Query: 121 EAAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
E+ PAR ++ SLP VSY A+D F++ C
Sbjct: 267 ESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVC 310
Score = 159 (61.0 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 41/131 (31%), Positives = 57/131 (43%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P G T V + V + + M Y D+FF QTW D RL+ T
Sbjct: 43 YDNRLRPGFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFG-GPTEIL 101
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYCL 303
RL + + +W PD+FF+N K MT PN + ++ TILY ++ A L
Sbjct: 102 RLNNL-MVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRL 160
Query: 304 VNIVLGDSDLP 314
VN + P
Sbjct: 161 VNFPMDGHACP 171
Score = 78 (32.5 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
ID++SR+ FPV FA N YW+++
Sbjct: 419 IDQYSRILFPVAFAGFNLVYWVVY 442
Score = 41 (19.5 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 313 FVFSALIEFAAVN 325
>RGD|68320 [details] [associations]
symbol:Gabre "gamma-aminobutyric acid (GABA) A receptor, epsilon"
species:10116 "Rattus norvegicus" [GO:0004890 "GABA-A receptor
activity" evidence=IDA] [GO:0005230 "extracellular ligand-gated ion
channel activity" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006821 "chloride transport" evidence=TAS] [GO:0007214
"gamma-aminobutyric acid signaling pathway" evidence=IDA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0034707 "chloride
channel complex" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEP] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR006028 InterPro:IPR006029 InterPro:IPR006201
InterPro:IPR006202 InterPro:IPR008099 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01723 PROSITE:PS00236 RGD:68320 GO:GO:0005886 GO:GO:0042493
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112 SUPFAM:SSF63712
TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707 GO:GO:0005254
GO:GO:0006821 HOVERGEN:HBG051707 EMBL:AF255612 EMBL:U92284
IPI:IPI00191361 UniGene:Rn.54455 ProteinModelPortal:Q9ES14
PRIDE:Q9ES14 eggNOG:NOG148905 BindingDB:Q9ES14 ChEMBL:CHEMBL306
ArrayExpress:Q9ES14 Genevestigator:Q9ES14 Uniprot:Q9ES14
Length = 506
Score = 244 (91.0 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
Identities = 54/167 (32%), Positives = 87/167 (52%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQWDPEMPLAVDEKIELPQLQL- 64
R+T+ C+++ + +P D+ C L S S+ ++I++W+ L +D K L+
Sbjct: 189 RMTIDARCSLHMLNFPMDSHSCPLSFSSFSYDEHEMIYKWE-NFKLKIDAKNTWKLLEFD 247
Query: 65 ---VKNKTADCSQVYST--GNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIK 119
V NKT ++ ST G+F + F + RR G+ +F YIP+ + ++SWVSFWIK
Sbjct: 248 FTGVNNKT----EIISTPVGDFMVMTFFFNVSRRFGFIVFQNYIPSSVTTMLSWVSFWIK 303
Query: 120 PEAAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSACTV 166
EAA AR S+ + P VSYL A+D +++ C V
Sbjct: 304 IEAAAARASVGVSSVLTMATLGTFSRKNFPRVSYLTALDFYIAICFV 350
Score = 196 (74.1 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 54/155 (34%), Positives = 76/155 (49%)
Query: 184 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSE 242
YD K+RP E +PT+V V V L I M Y+ DI F QTW D RLR N T E
Sbjct: 83 YDHKLRPSIGE-KPTVVTVKVFVNSLGPISILDMEYSIDIIFYQTWYDERLRY--NDTFE 139
Query: 243 YRLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMALMEYC 302
+L + + +W PD+FF+N+K +TIPN ++KD +LY V+ A
Sbjct: 140 TLILHGNVVSQLWIPDTFFRNSKRTQEYDITIPNQMALIHKDGKVLYTVRMTIDARCSLH 199
Query: 303 LVNIVLGDSDLPKPPEPAKQDKIFELAAK-ENARL 336
++N + P D+ E+ K EN +L
Sbjct: 200 MLNFPMDSHSCPLSFSSFSYDE-HEMIYKWENFKL 233
Score = 70 (29.7 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIM 387
+D +SRV FP+ F N YW++
Sbjct: 480 LDNYSRVLFPITFFFFNVVYWVI 502
>UNIPROTKB|P10063 [details] [associations]
symbol:GABRA2 "Gamma-aminobutyric acid receptor subunit
alpha-2" species:9913 "Bos taurus" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005254 "chloride channel
activity" evidence=IEA] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IEA] [GO:0005230 "extracellular
ligand-gated ion channel activity" evidence=IEA] [GO:0004890
"GABA-A receptor activity" evidence=IEA] InterPro:IPR001390
InterPro:IPR005432 InterPro:IPR006028 InterPro:IPR006029
InterPro:IPR006201 InterPro:IPR006202 InterPro:IPR018000
Pfam:PF02931 Pfam:PF02932 PRINTS:PR00252 PRINTS:PR00253
PRINTS:PR01079 PRINTS:PR01615 PROSITE:PS00236 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0005230 GO:GO:0004890
Gene3D:2.70.170.10 PANTHER:PTHR18945 SUPFAM:SSF90112
SUPFAM:SSF63712 TIGRFAMs:TIGR00860 GO:GO:0007214 GO:GO:0034707
GO:GO:0005254 KO:K05175 eggNOG:NOG238757 HOGENOM:HOG000231337
HOVERGEN:HBG051707 OrthoDB:EOG4ZS935 EMBL:X12361 IPI:IPI00713807
PIR:S12510 RefSeq:NP_776966.1 UniGene:Bt.174
ProteinModelPortal:P10063 GeneID:282236 KEGG:bta:282236 CTD:2555
InParanoid:P10063 BindingDB:P10063 ChEMBL:CHEMBL2321
NextBio:20806055 Uniprot:P10063
Length = 451
Score = 229 (85.7 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 51/163 (31%), Positives = 81/163 (49%)
Query: 6 RLTLKLSCAMNFMIYPHDTQECSLQMESLSHTTDDLIFQW----DPEMPLAVDEKIELPQ 61
RLT++ C M+ +P D C L+ S ++TT ++ + W + +A D L Q
Sbjct: 159 RLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNASDSVQVAPDGS-RLNQ 217
Query: 62 LQLVKNKTADCSQVYSTGNFTCLEVIFVLKRRLGYYLFHTYIPTCLIVIMSWVSFWIKPE 121
L + STG +T + F LKR++GY++ TY+P + VI+S VSFW+ E
Sbjct: 218 YDLPGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE 277
Query: 122 AAPARXXXXXXXXXXXXXQHAKSQASLPPVSYLKAVDAFMSAC 164
+ PAR ++ SLP V+Y A+D F++ C
Sbjct: 278 SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVC 320
Score = 160 (61.4 bits), Expect = 4.7e-13, Sum P(3) = 4.7e-13
Identities = 36/114 (31%), Positives = 52/114 (45%)
Query: 184 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYAADIFFAQTWKDHRLRLPENMTSEY 243
YD P T V+ ++ V + + M Y D+FF Q WKD RL+ M
Sbjct: 53 YDNRLRPGLGDSITEVFTNIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNI-L 111
Query: 244 RLLEVDWLKNMWRPDSFFKNAKAVTFQTMTIPNHYVWLYKDKTILYMVKFVFMA 297
RL + +W PD+FF N K MT+PN + + D T+LY ++ A
Sbjct: 112 RLNNL-MASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQA 164
Score = 76 (31.8 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 365 IDRFSRVFFPVLFAILNCTYWIMF 388
IDR SR+ FPVLF N YW +
Sbjct: 417 IDRMSRIVFPVLFGTFNLVYWATY 440
Score = 41 (19.5 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 293 FVFMALMEYCLVN 305
FVF AL+E+ VN
Sbjct: 323 FVFSALIEFATVN 335
WARNING: HSPs involving 81 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.137 0.431 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 392 364 0.00083 117 3 11 22 0.46 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 331
No. of states in DFA: 624 (66 KB)
Total size of DFA: 276 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.69u 0.08s 30.77t Elapsed: 00:00:20
Total cpu time: 30.76u 0.08s 30.84t Elapsed: 00:00:26
Start: Thu Aug 15 14:29:42 2013 End: Thu Aug 15 14:30:08 2013
WARNINGS ISSUED: 2