BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5860
(138 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P57102|HAND2_DANRE Heart- and neural crest derivatives-expressed protein 2 OS=Danio
rerio GN=hand2 PE=2 SV=1
Length = 208
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
Query: 21 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKIL 80
R VKRR TAN+KERRRTQSIN+AF++LRECIPNVP+DTKLSKIKTLRLATSYI+YLM IL
Sbjct: 87 RTVKRRPTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDIL 146
Query: 81 ETDDI-ISIDDFKADL 95
+ D+ + FKA+
Sbjct: 147 DKDEQNGETEAFKAEF 162
>sp|P61295|HAND2_RAT Heart- and neural crest derivatives-expressed protein 2 OS=Rattus
norvegicus GN=Hand2 PE=2 SV=1
Length = 217
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
Query: 23 VKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILET 82
VKRR TAN+KERRRTQSIN+AF++LRECIPNVP+DTKLSKIKTLRLATSYI+YLM +L
Sbjct: 98 VKRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAK 157
Query: 83 DDI-ISIDDFKADL 95
DD + FKA++
Sbjct: 158 DDQNGEAEAFKAEI 171
>sp|Q61039|HAND2_MOUSE Heart- and neural crest derivatives-expressed protein 2 OS=Mus
musculus GN=Hand2 PE=1 SV=3
Length = 217
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
Query: 23 VKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILET 82
VKRR TAN+KERRRTQSIN+AF++LRECIPNVP+DTKLSKIKTLRLATSYI+YLM +L
Sbjct: 98 VKRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAK 157
Query: 83 DDI-ISIDDFKADL 95
DD + FKA++
Sbjct: 158 DDQNGEAEAFKAEI 171
>sp|P61296|HAND2_HUMAN Heart- and neural crest derivatives-expressed protein 2 OS=Homo
sapiens GN=HAND2 PE=1 SV=1
Length = 217
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
Query: 23 VKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILET 82
VKRR TAN+KERRRTQSIN+AF++LRECIPNVP+DTKLSKIKTLRLATSYI+YLM +L
Sbjct: 98 VKRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAK 157
Query: 83 DDI-ISIDDFKADL 95
DD + FKA++
Sbjct: 158 DDQNGEAEAFKAEI 171
>sp|Q90690|HAND2_CHICK Heart- and neural crest derivatives-expressed protein 2 OS=Gallus
gallus GN=HAND2 PE=2 SV=1
Length = 216
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
Query: 23 VKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILET 82
VKRR TAN+KERRRTQSIN+AF++LRECIPNVP+DTKLSKIKTLRLATSYI+YLM +L
Sbjct: 97 VKRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLPK 156
Query: 83 DDI-ISIDDFKADL 95
DD + FKA++
Sbjct: 157 DDQNGEAEAFKAEI 170
>sp|P97832|HAND1_RAT Heart- and neural crest derivatives-expressed protein 1 OS=Rattus
norvegicus GN=Hand1 PE=2 SV=2
Length = 216
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 21 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKIL 80
R+ +R+ + KKERRRT+SIN+AF++LRECIPNVP+DTKLSKIKTLRLATSYI+YLM +L
Sbjct: 91 RLPRRKGSGPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVL 150
Query: 81 ETDDIIS-IDDFKADLSNHSSHRKNKSQYDSPSE 113
D + FKA+L R++K + +SP +
Sbjct: 151 AKDAQAGDPEAFKAELKKTDGGRESKRKRESPQQ 184
>sp|Q64279|HAND1_MOUSE Heart- and neural crest derivatives-expressed protein 1 OS=Mus
musculus GN=Hand1 PE=1 SV=1
Length = 216
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
Query: 21 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKIL 80
R+ KR+ + KKERRRT+SIN+AF++LRECIPNVP+DTKLSKIKTLRLATSYI+YLM +L
Sbjct: 91 RLPKRKGSGPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVL 150
Query: 81 ETDDIIS-IDDFKADLSNHSSHRKNKSQYDSPSEISS 116
D + FKA+L R++K + + P + S
Sbjct: 151 AKDAQAGDPEAFKAELKKTDGGRESKRKRELPQQPES 187
>sp|P57101|HAND2_XENLA Heart- and neural crest derivatives-expressed protein 2 OS=Xenopus
laevis GN=hand2 PE=2 SV=1
Length = 210
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 64/76 (84%), Gaps = 1/76 (1%)
Query: 21 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKIL 80
R VKRR TAN+KERRRT SIN+AF++LRECIPNVP+DTKLSKIKTLRLATSYI+YLM +L
Sbjct: 89 RPVKRRGTANRKERRRTISINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLL 148
Query: 81 ETDDI-ISIDDFKADL 95
DD + FKA++
Sbjct: 149 AKDDQNGETEAFKAEI 164
>sp|Q28555|HAND1_SHEEP Heart- and neural crest derivatives-expressed protein 1 OS=Ovis
aries GN=HAND1 PE=2 SV=1
Length = 204
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 21 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKIL 80
R+ +R+ + KKERRRT+SIN+AF++LRECIPNVP+DTKLSKIKTLRLATSYI+YLM +L
Sbjct: 97 RLGRRKGSGPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVL 156
Query: 81 ETDDIIS-IDDFKADLSNHSSHRKNKSQYD 109
D + FKA+L R++K + +
Sbjct: 157 AKDAQAGDPEAFKAELKKADGGRESKRKRE 186
>sp|Q0VCE2|HAND1_BOVIN Heart- and neural crest derivatives-expressed protein 1 OS=Bos
taurus GN=HAND1 PE=2 SV=1
Length = 218
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 21 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKIL 80
R+ +R+ + KKERRRT+SIN+AF++LRECIPNVP+DTKLSKIKTLRLATSYI+YLM +L
Sbjct: 94 RLGRRKGSGPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVL 153
Query: 81 ETDDIIS-IDDFKADLSNHSSHRKNKSQYD 109
D + FKA+L R++K + +
Sbjct: 154 AKDAQAGDPEAFKAELKKADGGRESKRKRE 183
>sp|Q90691|HAND1_CHICK Heart- and neural crest derivatives-expressed protein 1 OS=Gallus
gallus GN=HAND1 PE=2 SV=1
Length = 202
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 73/99 (73%), Gaps = 3/99 (3%)
Query: 21 RVVKRRNTAN-KKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKI 79
R+ +R+ KKERRRT+SIN+AF++LRECIPNVP+DTKLSKIKTLRLATSYI+YLM++
Sbjct: 79 RLGRRKGVGGPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMEV 138
Query: 80 LETD-DIISIDDFKADLSNHSSHRKNKSQYDSPSEISSN 117
L D + FKA+L + R+NK + ++ E+ S
Sbjct: 139 LARDSQPGEPEGFKAELKK-ADGRENKRKRETQPEVYSQ 176
>sp|P57100|HAND1_RABIT Heart- and neural crest derivatives-expressed protein 1
OS=Oryctolagus cuniculus GN=HAND1 PE=2 SV=1
Length = 215
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 21 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKIL 80
R+ +R+ + KKERRRT+SIN+AF++LRECIPNVP+DTKLSKIKTLRLATSYI+YLM +L
Sbjct: 91 RLGRRKGSGPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVL 150
Query: 81 ETDDIIS-IDDFKADLSNHSSHRKNKSQYD 109
D + FKA+L R++K + +
Sbjct: 151 AKDAQAGDPEAFKAELKKVDGGRESKRKRE 180
>sp|O96004|HAND1_HUMAN Heart- and neural crest derivatives-expressed protein 1 OS=Homo
sapiens GN=HAND1 PE=2 SV=1
Length = 215
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Query: 21 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKIL 80
R+ +R+ + KKERRRT+SIN+AF++LRECIPNVP+DTKLSKIKTLRLATSYI+YLM +L
Sbjct: 91 RLGRRKGSGPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVL 150
Query: 81 ETDDIIS-IDDFKADLSNHSSHRKNKSQYD 109
D + FKA+L R++K + +
Sbjct: 151 AKDAQSGDPEAFKAELKKADGGRESKRKRE 180
>sp|O73615|HAND1_XENLA Heart- and neural crest derivatives-expressed protein 1 OS=Xenopus
laevis GN=hand1 PE=2 SV=1
Length = 197
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Query: 21 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKIL 80
++ +R+ KKERRRT+SIN+AF++LRECIPNVP+DTKLSKIKTLRLATSYI YLM +L
Sbjct: 77 KLGRRKGAPPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIGYLMDVL 136
Query: 81 ETD-DIISIDDFKADLSNHSSHRKNKSQ 107
D + + FKA++ R+ + Q
Sbjct: 137 AKDSEPGGTEAFKAEIKKVDGKRRREPQ 164
>sp|Q60539|TCF15_MESAU Transcription factor 15 OS=Mesocricetus auratus GN=TCF15 PE=2 SV=1
Length = 195
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 18 PIIRVVKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLM 77
P++ VV++R AN +ER RTQS+N AF+ LR IP P D KLSKI+TLRLA+SYI++L
Sbjct: 65 PVV-VVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLA 123
Query: 78 KILETDDIISIDD----FKADLSNHSS 100
+L D + DD F+A S+
Sbjct: 124 NVLMLGD--AADDGQPCFRAAGGGKSA 148
>sp|Q60756|TCF15_MOUSE Transcription factor 15 OS=Mus musculus GN=Tcf15 PE=1 SV=2
Length = 195
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 7/87 (8%)
Query: 18 PIIRVVKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLM 77
P++ VV++R AN +ER RTQS+N AF+ LR IP P D KLSKI+TLRLA+SYI++L
Sbjct: 65 PVV-VVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLA 123
Query: 78 KILETDDIISIDD----FKADLSNHSS 100
+L D + DD F+A S+
Sbjct: 124 NVLLLGD--AADDGQPCFRAAGGGKSA 148
>sp|P79782|TCF15_CHICK Transcription factor 15 OS=Gallus gallus GN=TCF15 PE=2 SV=2
Length = 183
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 18 PIIRVVKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLM 77
P++ +VK+R AN +ER RTQS+N AF+ LR IP P D KLSKI+TLRLA+SYI++L
Sbjct: 56 PMV-MVKQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLA 114
Query: 78 KIL 80
+L
Sbjct: 115 NVL 117
>sp|P13903|TWIST_XENLA Twist-related protein OS=Xenopus laevis GN=twist1 PE=2 SV=1
Length = 166
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N AFS LR+ IP +PSD KLSKI+TL+LA+ YI +L ++L++D+
Sbjct: 73 QRVMANVRERQRTQSLNEAFSSLRKIIPTLPSD-KLSKIQTLKLASRYIDFLCQVLQSDE 131
Query: 85 I 85
+
Sbjct: 132 L 132
>sp|P26687|TWST1_MOUSE Twist-related protein 1 OS=Mus musculus GN=Twist1 PE=1 SV=1
Length = 206
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N AF+ LR+ IP +PSD KLSKI+TL+LA YI +L ++L++D+
Sbjct: 113 QRVMANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 171
Query: 85 I 85
+
Sbjct: 172 L 172
>sp|P59101|SCX_CHICK Basic helix-loop-helix transcription factor scleraxis OS=Gallus
gallus GN=SCX PE=2 SV=1
Length = 187
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 46/60 (76%)
Query: 21 RVVKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKIL 80
R ++R+TAN +ER RT S+N AF+ LR IP P+D KLSKI+TLRLA+SYIS+L +L
Sbjct: 64 REPRQRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVL 123
>sp|Q8MIB5|TWST1_SAGOE Twist-related protein 1 OS=Saguinus oedipus GN=TWIST1 PE=3 SV=1
Length = 203
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N AF+ LR+ IP +PSD KLSKI+TL+LA YI +L ++L++D+
Sbjct: 110 QRVMANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 168
Query: 85 I 85
+
Sbjct: 169 L 169
>sp|Q8MID5|TWST1_MICMU Twist-related protein 1 OS=Microcebus murinus GN=TWIST1 PE=3 SV=1
Length = 199
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N AF+ LR+ IP +PSD KLSKI+TL+LA YI +L ++L++D+
Sbjct: 106 QRVMANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 164
Query: 85 I 85
+
Sbjct: 165 L 165
>sp|Q8MIF3|TWST1_EULFU Twist-related protein 1 OS=Eulemur fulvus fulvus GN=TWIST1 PE=3
SV=1
Length = 198
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N AF+ LR+ IP +PSD KLSKI+TL+LA YI +L ++L++D+
Sbjct: 105 QRVMANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 163
Query: 85 I 85
+
Sbjct: 164 L 164
>sp|Q8MIE7|TWST1_NOMCO Twist-related protein 1 OS=Nomascus concolor GN=TWIST1 PE=3 SV=1
Length = 204
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N AF+ LR+ IP +PSD KLSKI+TL+LA YI +L ++L++D+
Sbjct: 111 QRVMANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 169
Query: 85 I 85
+
Sbjct: 170 L 170
>sp|Q8MIB9|TWST1_PONPY Twist-related protein 1 OS=Pongo pygmaeus GN=TWIST1 PE=3 SV=1
Length = 203
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N AF+ LR+ IP +PSD KLSKI+TL+LA YI +L ++L++D+
Sbjct: 110 QRVMANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 168
Query: 85 I 85
+
Sbjct: 169 L 169
>sp|Q7JGP2|TWST1_MACTO Twist-related protein 1 OS=Macaca tonkeana GN=TWIST1 PE=3 SV=1
Length = 201
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N AF+ LR+ IP +PSD KLSKI+TL+LA YI +L ++L++D+
Sbjct: 108 QRVMANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 166
Query: 85 I 85
+
Sbjct: 167 L 167
>sp|Q15672|TWST1_HUMAN Twist-related protein 1 OS=Homo sapiens GN=TWIST1 PE=1 SV=1
Length = 202
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N AF+ LR+ IP +PSD KLSKI+TL+LA YI +L ++L++D+
Sbjct: 109 QRVMANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 167
Query: 85 I 85
+
Sbjct: 168 L 168
>sp|Q8MIH8|TWST1_CEBCA Twist-related protein 1 OS=Cebus capucinus GN=TWIST1 PE=3 SV=1
Length = 207
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N AF+ LR+ IP +PSD KLSKI+TL+LA YI +L ++L++D+
Sbjct: 114 QRVMANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 172
Query: 85 I 85
+
Sbjct: 173 L 173
>sp|O96642|TWIST_BRABE Twist-related protein OS=Branchiostoma belcheri GN=TWIST PE=2 SV=1
Length = 196
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N AFS LR+ IP +PSD KLSKI+TL+LA YI +L ++L +DD
Sbjct: 96 QRVLANVRERQRTQSLNEAFSSLRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLRSDD 154
>sp|Q64124|SCX_MOUSE Basic helix-loop-helix transcription factor scleraxis OS=Mus
musculus GN=Scx PE=1 SV=1
Length = 207
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKIL 80
+R+TAN +ER RT S+N AF+ LR IP P+D KLSKI+TLRLA+SYIS+L +L
Sbjct: 79 QRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVL 134
>sp|Q8I1G0|TWIST_DROER Protein twist OS=Drosophila erecta GN=twi PE=3 SV=1
Length = 490
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N+AF L++ IP +PSD KLSKI+TL+LAT YI +L ++L + D
Sbjct: 363 QRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSSSD 421
Query: 85 IISIDDFKADLS 96
I + +A S
Sbjct: 422 ISLLKALEAQGS 433
>sp|P10627|TWIST_DROME Protein twist OS=Drosophila melanogaster GN=twi PE=1 SV=2
Length = 490
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N+AF L++ IP +PSD KLSKI+TL+LAT YI +L ++L + D
Sbjct: 363 QRVMANVRERQRTQSLNDAFKSLQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSSSD 421
Query: 85 IISIDDFKADLS 96
I + +A S
Sbjct: 422 ISLLKALEAQGS 433
>sp|Q7RTU7|SCX_HUMAN Basic helix-loop-helix transcription factor scleraxis OS=Homo
sapiens GN=SCXA PE=2 SV=1
Length = 201
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKIL 80
+R+TAN +ER RT S+N AF+ LR IP P+D KLSKI+TLRLA+SYIS+L +L
Sbjct: 76 QRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVL 131
>sp|P97831|TWST2_RAT Twist-related protein 2 OS=Rattus norvegicus GN=Twist2 PE=2 SV=2
Length = 160
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N AF+ LR+ IP +PSD KLSKI+TL+LA YI +L ++L++D+
Sbjct: 67 QRILANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 125
Query: 85 I 85
+
Sbjct: 126 M 126
>sp|Q8WVJ9|TWST2_HUMAN Twist-related protein 2 OS=Homo sapiens GN=TWIST2 PE=1 SV=1
Length = 160
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N AF+ LR+ IP +PSD KLSKI+TL+LA YI +L ++L++D+
Sbjct: 67 QRILANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 125
Query: 85 I 85
+
Sbjct: 126 M 126
>sp|Q9D030|TWST2_MOUSE Twist-related protein 2 OS=Mus musculus GN=Twist2 PE=1 SV=1
Length = 160
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N AF+ LR+ IP +PSD KLSKI+TL+LA YI +L ++L++D+
Sbjct: 67 QRILANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 125
Query: 85 I 85
+
Sbjct: 126 M 126
>sp|Q9TX44|TWIST_DROVI Protein twist OS=Drosophila virilis GN=twi PE=3 SV=2
Length = 519
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N+AF L++ IP +PSD KLSKI+TL+LAT YI +L ++L + D
Sbjct: 391 QRVMANVRERQRTQSLNDAFKALQQIIPTLPSD-KLSKIQTLKLATRYIDFLCRMLSSSD 449
Query: 85 IISIDDFKA 93
I + +A
Sbjct: 450 ISLLKALEA 458
>sp|Q12870|TCF15_HUMAN Transcription factor 15 OS=Homo sapiens GN=TCF15 PE=2 SV=3
Length = 199
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 26 RNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDDI 85
R AN +ER RTQS+N AF+ LR IP P D KLSKI+T+RLA+SYI++L +L D
Sbjct: 74 RQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETVRLASSYIAHLANVLLLGD- 132
Query: 86 ISIDD 90
S DD
Sbjct: 133 -SADD 136
>sp|Q8MI06|TWST1_GORGO Twist-related protein 1 OS=Gorilla gorilla gorilla GN=TWIST1 PE=3
SV=1
Length = 203
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N F+ LR+ IP +PSD KLSKI+TL+LA YI +L ++L++D+
Sbjct: 110 QRVMANVRERQRTQSLNEPFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYRVLQSDE 168
Query: 85 I 85
+
Sbjct: 169 L 169
>sp|Q8MIH1|TWST1_CALJA Twist-related protein 1 OS=Callithrix jacchus GN=TWIST1 PE=3 SV=1
Length = 203
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN + R+RTQS+N AF+ LR+ IP +PSD KLSKI+TL+LA YI +L ++L++D+
Sbjct: 110 QRVMANVRGRQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 168
Query: 85 I 85
+
Sbjct: 169 L 169
>sp|Q8MI03|TWST1_PANTR Twist-related protein 1 OS=Pan troglodytes GN=TWIST1 PE=3 SV=1
Length = 201
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETDD 84
+R AN +ER+RTQS+N AF+ L + IP +PSD KLSKI+TL+LA YI +L ++L++D+
Sbjct: 110 QRVMANVRERQRTQSLNEAFAALPKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 168
Query: 85 I 85
+
Sbjct: 169 L 169
>sp|Q7RTS3|PTF1A_HUMAN Pancreas transcription factor 1 subunit alpha OS=Homo sapiens
GN=PTF1A PE=1 SV=1
Length = 328
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 26 RNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETD 83
R AN +ERRR QSIN+AF LR IP +P + +LSK+ TLRLA YI++L ++++ D
Sbjct: 165 RQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQAD 222
>sp|Q7ZSX3|PTF1A_DANRE Pancreas transcription factor 1 subunit alpha OS=Danio rerio
GN=ptf1a PE=2 SV=1
Length = 265
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 46/64 (71%)
Query: 20 IRVVKRRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKI 79
+ + + R AN +ERRR QSIN+AF LR IP +P + +LSK+ TLRLA YI++L ++
Sbjct: 111 VEMQQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLAEL 170
Query: 80 LETD 83
+++D
Sbjct: 171 VQSD 174
>sp|Q64305|PTF1A_RAT Pancreas transcription factor 1 subunit alpha OS=Rattus norvegicus
GN=Ptf1a PE=1 SV=1
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 26 RNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETD 83
R AN +ERRR QSIN+AF LR IP +P + +LSK+ TLRLA YI++L ++++ D
Sbjct: 164 RQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQAD 221
>sp|Q9QX98|PTF1A_MOUSE Pancreas transcription factor 1 subunit alpha OS=Mus musculus
GN=Ptf1a PE=1 SV=1
Length = 324
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 26 RNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETD 83
R AN +ERRR QSIN+AF LR IP +P + +LSK+ TLRLA YI++L ++++ D
Sbjct: 162 RQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQAD 219
>sp|O88940|MUSC_MOUSE Musculin OS=Mus musculus GN=Msc PE=1 SV=1
Length = 201
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 45/59 (76%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETD 83
+RN AN +ER R + ++ AFS L+ +P VP DTKLSK+ TLRLA+SYI++L ++L+ D
Sbjct: 103 QRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQED 161
>sp|Q4ZHW1|PTF1A_XENLA Pancreas transcription factor 1 subunit alpha OS=Xenopus laevis
GN=ptf1a PE=2 SV=1
Length = 270
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 26 RNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETD 83
R AN +ERRR QSIN+AF LR IP +P + +LSK+ TLRLA YI++L +++++D
Sbjct: 121 RQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSEMVQSD 178
>sp|Q5E9S3|TCF21_BOVIN Transcription factor 21 OS=Bos taurus GN=TCF21 PE=2 SV=1
Length = 179
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 44/59 (74%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETD 83
+RN AN +ER R + ++ AFS L+ +P VP DTKLSK+ TLRLA+SYI++L +IL D
Sbjct: 80 QRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILAND 138
>sp|O43680|TCF21_HUMAN Transcription factor 21 OS=Homo sapiens GN=TCF21 PE=2 SV=2
Length = 179
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 44/59 (74%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETD 83
+RN AN +ER R + ++ AFS L+ +P VP DTKLSK+ TLRLA+SYI++L +IL D
Sbjct: 80 QRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILAND 138
>sp|Q32PV5|TCF21_DANRE Transcription factor 21 OS=Danio rerio GN=tcf21 PE=2 SV=1
Length = 176
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 44/59 (74%)
Query: 25 RRNTANKKERRRTQSINNAFSDLRECIPNVPSDTKLSKIKTLRLATSYISYLMKILETD 83
+RN AN +ER R + ++ AFS L+ +P VP DTKLSK+ TLRLA+SYI++L +IL D
Sbjct: 77 QRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILAND 135
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.127 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,725,488
Number of Sequences: 539616
Number of extensions: 1666934
Number of successful extensions: 4639
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 112
Number of HSP's that attempted gapping in prelim test: 4276
Number of HSP's gapped (non-prelim): 421
length of query: 138
length of database: 191,569,459
effective HSP length: 103
effective length of query: 35
effective length of database: 135,989,011
effective search space: 4759615385
effective search space used: 4759615385
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)