BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5866
(98 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q08180|ICCR_DROME Irregular chiasm C-roughest protein OS=Drosophila melanogaster
GN=rst PE=2 SV=2
Length = 764
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQ-DLHSQVYTVTVLTPPQPPKISPGANPV 70
+ G Y L I + D+ +++C++ GQ + S +TVL PP+ PKI+ G
Sbjct: 86 EEGDYSLDIYPVMLD-DDARYQCQVSPGPEGQPAIRSTFAGLTVLVPPEAPKITQGDVIY 144
Query: 71 ATEGRAIELVCSTSGGSPDPQIS 93
ATE R +E+ C + GG P +I+
Sbjct: 145 ATEDRKVEIECVSVGGKPAAEIT 167
>sp|Q9JKA5|GPA33_MOUSE Cell surface A33 antigen OS=Mus musculus GN=Gpa33 PE=2 SV=2
Length = 319
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 17 DLIISNASFE------RDNGKFECRLKAAGSGQDLHSQVYT-VTVLTPPQPPKISPGANP 69
D +SNAS DNG +EC + S QD++++ + VL PP P S
Sbjct: 94 DAELSNASITIDQLTMDDNGTYECSVSLM-SDQDVNAKSRVRLLVLVPPSKPDCSIQGEM 152
Query: 70 VATEGRAIELVCSTSGGSPDPQIS 93
V G I+L C ++ GSP PQ S
Sbjct: 153 VI--GNNIQLTCHSAEGSPSPQYS 174
>sp|Q66KX2|CADM4_XENLA Cell adhesion molecule 4 OS=Xenopus laevis GN=cadm4 PE=2 SV=1
Length = 390
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 20 ISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIEL 79
+S+A E + G F C+L +D H Q+ T+TV+ PP P + A EG IEL
Sbjct: 94 LSDAKLEDEGGYF-CQLYT----EDTHHQIATLTVIVPPDNPLVE--VKEQAVEGGEIEL 146
Query: 80 VC 81
C
Sbjct: 147 TC 148
>sp|Q8R464|CADM4_MOUSE Cell adhesion molecule 4 OS=Mus musculus GN=Cadm4 PE=1 SV=1
Length = 388
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 2 DKVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61
++ ++ ++ P R + +S+A E D G + C+L +D H Q+ T+TVL P+ P
Sbjct: 75 ERFQLEEFSPR--RVRIRLSDARLE-DEGGYFCQLYT----EDTHHQIATLTVLVAPENP 127
Query: 62 KISPGANPVATEGRAIELVC 81
+ A EG +EL C
Sbjct: 128 VVE--VREQAVEGGEVELSC 145
>sp|Q1WIM1|CADM4_RAT Cell adhesion molecule 4 OS=Rattus norvegicus GN=Cadm4 PE=1 SV=1
Length = 388
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 2 DKVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61
++ ++ ++ P R + +S+A E D G + C+L +D H Q+ T+TVL P+ P
Sbjct: 75 ERFQLEEFSPR--RVRIRLSDARLE-DEGGYFCQLYT----EDTHHQIATLTVLVAPENP 127
Query: 62 KISPGANPVATEGRAIELVC 81
+ A EG +EL C
Sbjct: 128 VVE--VREQAVEGGEVELSC 145
>sp|Q8NFZ8|CADM4_HUMAN Cell adhesion molecule 4 OS=Homo sapiens GN=CADM4 PE=1 SV=1
Length = 388
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 2 DKVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61
++ ++ ++ P R + +S+A E D G + C+L +D H Q+ T+TVL P+ P
Sbjct: 75 ERFQLEEFSPR--RVRIRLSDARLE-DEGGYFCQLYT----EDTHHQIATLTVLVAPENP 127
Query: 62 KISPGANPVATEGRAIELVC 81
+ A EG +EL C
Sbjct: 128 VVE--VREQAVEGGEVELSC 145
>sp|P57087|JAM2_HUMAN Junctional adhesion molecule B OS=Homo sapiens GN=JAM2 PE=1 SV=1
Length = 298
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 2 DKVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKA-AGSGQDLHSQVYTVTVLTPPQP 60
++ E+ID+ ++ I N + D GK+ C + A + GQ+L T+ VL P
Sbjct: 85 NRAEMIDF-------NIRIKNVT-RSDAGKYRCEVSAPSEQGQNLEEDTVTLEVLVAPAV 136
Query: 61 PKISPGANPVATEGRAIELVCSTSGGSPDPQIS 93
P ++ ++ G +EL C G+P P+ +
Sbjct: 137 PSCEVPSSALS--GTVVELRCQDKEGNPAPEYT 167
>sp|Q80W68|KIRR1_MOUSE Kin of IRRE-like protein 1 OS=Mus musculus GN=Kirrel PE=1 SV=1
Length = 789
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVA 71
D+G+Y+L I++A D+ +EC+ A L S+ +TVL PP+ +I G +
Sbjct: 111 DAGQYNLEITDAELS-DDASYECQATEAA----LRSRRAKLTVLIPPEETRIDGGPVILL 165
Query: 72 TEGRAIELVCSTSGGSPDPQI 92
G L C P I
Sbjct: 166 QAGTPYNLTCRAFNAKPAATI 186
>sp|Q6X936|KIRR1_RAT Kin of IRRE-like protein 1 OS=Rattus norvegicus GN=Kirrel PE=1 SV=1
Length = 789
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVA 71
D+G+Y+L I++A D+ +EC+ A L S+ +TVL PP+ +I G +
Sbjct: 111 DAGQYNLEITDAELS-DDASYECQATEAA----LRSRRAKLTVLIPPEDTRIDGGPVILL 165
Query: 72 TEGRAIELVCSTSGGSPDPQI 92
G L C P I
Sbjct: 166 QAGTPYNLTCRAFNAKPAATI 186
>sp|O88792|JAM1_MOUSE Junctional adhesion molecule A OS=Mus musculus GN=F11r PE=1 SV=2
Length = 300
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 27 RDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGG 86
+DNG++ C + G GQ+ +TVL PP P IS + V RA+ L CS G
Sbjct: 101 KDNGEYTCMVSEEG-GQNYGEVSIHLTVLVPPSKPTISV-PSSVTIGNRAV-LTCSEHDG 157
Query: 87 SPDPQIS 93
SP + S
Sbjct: 158 SPPSEYS 164
>sp|Q8BLQ9|CADM2_MOUSE Cell adhesion molecule 2 OS=Mus musculus GN=Cadm2 PE=1 SV=2
Length = 435
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 2 DKVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61
+++E++ R + +S+ S D G++ C L S+ Y +TVL P+ P
Sbjct: 75 NRIELV--RASWHELSISVSDVSLS-DEGQYTCSLFTMPVKT---SKAY-LTVLGVPEKP 127
Query: 62 KISPGANPVATEGRAIELVCSTSGGSPDPQI 92
+IS ++PV EG ++L C TSG P I
Sbjct: 128 QISGFSSPVM-EGDLMQLTCKTSGSKPAADI 157
>sp|Q1WIM2|CADM2_RAT Cell adhesion molecule 2 OS=Rattus norvegicus GN=Cadm2 PE=1 SV=2
Length = 435
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 2 DKVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61
+++E++ R + +S+ S D G++ C L S+ Y +TVL P+ P
Sbjct: 75 NRIELV--RASWHELSISVSDVSLS-DEGQYTCSLFTMPVKT---SKAY-LTVLGVPEKP 127
Query: 62 KISPGANPVATEGRAIELVCSTSGGSPDPQI 92
+IS ++PV EG ++L C TSG P I
Sbjct: 128 QISGFSSPVM-EGDLMQLTCKTSGSKPAADI 157
>sp|Q96J84|KIRR1_HUMAN Kin of IRRE-like protein 1 OS=Homo sapiens GN=KIRREL PE=1 SV=2
Length = 757
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVA 71
D+G+Y+L I++A D+ +EC+ A L S+ +TVL PP+ +I G +
Sbjct: 79 DAGQYNLEITDAELS-DDASYECQATEAA----LRSRRAKLTVLIPPEDTRIDGGPVILL 133
Query: 72 TEGRAIELVCSTSGGSPDPQI 92
G L C P I
Sbjct: 134 QAGTPHNLTCRAFNAKPAATI 154
>sp|Q8N3J6|CADM2_HUMAN Cell adhesion molecule 2 OS=Homo sapiens GN=CADM2 PE=2 SV=1
Length = 435
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 2 DKVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61
+++E++ R + +S+ S D G++ C L S+ Y +TVL P+ P
Sbjct: 75 NRIELV--RASWHELSISVSDVSLS-DEGQYTCSLFTMPVKT---SKAY-LTVLGVPEKP 127
Query: 62 KISPGANPVATEGRAIELVCSTSGGSPDPQI 92
+IS ++PV EG ++L C TSG P I
Sbjct: 128 QISGFSSPVM-EGDLMQLTCKTSGSKPAADI 157
>sp|Q9JHY1|JAM1_RAT Junctional adhesion molecule A OS=Rattus norvegicus GN=F11r PE=1
SV=1
Length = 300
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 27 RDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGG 86
+DNG++ C + G GQ+ +TVL PP P +S ++ V RA+ L CS G
Sbjct: 101 KDNGEYTCMVSEDG-GQNYGEVSIHLTVLVPPSKPTVSIPSS-VTIGNRAV-LTCSEHDG 157
Query: 87 SPDPQIS 93
SP + S
Sbjct: 158 SPPSEYS 164
>sp|Q99795|GPA33_HUMAN Cell surface A33 antigen OS=Homo sapiens GN=GPA33 PE=1 SV=1
Length = 319
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 28 DNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGS 87
DNG +EC + + + VL PP P+ G G I+L C + GS
Sbjct: 111 DNGTYECSVSLMSDLEGNTKSRVRLLVLVPPSKPEC--GIEGETIIGNNIQLTCQSKEGS 168
Query: 88 PDPQIS 93
P PQ S
Sbjct: 169 PTPQYS 174
>sp|Q7TSU7|KIRR2_MOUSE Kin of IRRE-like protein 2 OS=Mus musculus GN=Kirrel2 PE=1 SV=1
Length = 700
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVAT 72
SG++DL I E D +EC+ AG L S+ + V+ PP+ P++ G +
Sbjct: 80 SGQHDLHIKPVELE-DEASYECQASQAG----LRSRPAQLHVMVPPEAPQVLGGPSVSLV 134
Query: 73 EGRAIELVCSTSGGS-PDPQI 92
G L C + G S P P++
Sbjct: 135 AGVPGNLTCRSRGDSRPAPEL 155
>sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=4
Length = 34350
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 23/97 (23%)
Query: 5 EIIDYRPD-----SGRYD---------LIISNASFERDNGKFECRLKAAGSGQDLHSQVY 50
E+I Y+ D +GRY+ L+I NA E D G + CRL ++ + +
Sbjct: 13419 EVIWYKGDEEIIETGRYEILTEGRKRILVIQNAHLE-DAGNYNCRLPSSRTDGKVKVHEL 13477
Query: 51 TVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGS 87
++ PQ +I EG E VCS S S
Sbjct: 13478 AAEFISKPQNLEI--------LEGEKAEFVCSISKES 13506
>sp|Q6UWL6|KIRR2_HUMAN Kin of IRRE-like protein 2 OS=Homo sapiens GN=KIRREL2 PE=1 SV=2
Length = 708
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVAT 72
+G++DL I E D +EC+ AG L S+ + VL PP+ P++ G +
Sbjct: 83 NGQHDLHIRPVELE-DEASYECQATQAG----LRSRPAQLHVLVPPEAPQVLGGPSVSLV 137
Query: 73 EGRAIELVCSTSG-GSPDPQI 92
G L C + G P P++
Sbjct: 138 AGVPANLTCRSRGDARPTPEL 158
>sp|O60500|NPHN_HUMAN Nephrin OS=Homo sapiens GN=NPHS1 PE=1 SV=1
Length = 1241
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPV 70
P G + L I D+ ++EC++ + G +L S +++L PP+ ++P A +
Sbjct: 89 PARGEFHLHIEACDLS-DDAEYECQVGRSEMGPELVSPRVILSILVPPKLLLLTPEAGTM 147
Query: 71 ATEGRAIELV--CSTSGGSPDPQISVTL 96
T E V C + P P I++ L
Sbjct: 148 VTWVAGQEYVVNCVSGDAKPAPDITILL 175
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 50 YTVTVLTPPQPPKIS-PGANPVATE-GRAIELVCSTSGGSP 88
+TV VL PP PP I PG + G+++EL C GG+P
Sbjct: 232 FTVNVLFPPGPPVIEWPGLDEGHVRAGQSLELPCVARGGNP 272
>sp|Q8AV58|SDK1_CHICK Protein sidekick-1 OS=Gallus gallus GN=SDK1 PE=2 SV=1
Length = 2169
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 15 RYDLIIS-----NASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANP 69
RY +++S +A +D G F+C S + Q YT +T +P I P +
Sbjct: 386 RYKVLLSGGLRIHALRPQDAGIFQC----FASNKAGEIQTYTYLDVTNIKPAFIQPPEDT 441
Query: 70 VATEGRAIELVCSTSGGSPDPQIS 93
TEG L C S G+P P IS
Sbjct: 442 TVTEGMTAMLTCEVS-GAPKPAIS 464
>sp|A2ASS6|TITIN_MOUSE Titin OS=Mus musculus GN=Ttn PE=1 SV=1
Length = 35213
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 23/101 (22%)
Query: 5 EIIDYRPD-----SGRYD---------LIISNASFERDNGKFECRLKAAGSGQDLHSQVY 50
E+I Y+ D +GR++ LII NA E D G + CRL ++ + +
Sbjct: 14281 EVIWYKGDEEIIETGRFEILTDGRKRILIIQNAQLE-DAGSYNCRLPSSRTDSKVKVHEL 14339
Query: 51 TVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQ 91
++ PQ N EG E VC+ S S + Q
Sbjct: 14340 AAEFISKPQ--------NLEILEGEKAEFVCTISKESFEVQ 14372
>sp|Q8NDA2|HMCN2_HUMAN Hemicentin-2 OS=Homo sapiens GN=HMCN2 PE=2 SV=2
Length = 5065
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 26 ERDNGKFECRLK-AAGSGQ-DLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCST 83
E D+G + CR + AG+ Q D H + VLTPP + G +EL C T
Sbjct: 1378 EGDSGLYSCRAENQAGTAQRDFH-----LLVLTPPSVLGAGAAQEVLGLAGADVELQCWT 1432
Query: 84 SGGSPDPQISVT 95
S G P PQ+ T
Sbjct: 1433 S-GVPTPQVEWT 1443
>sp|Q5VJ70|IGSF5_RAT Immunoglobulin superfamily member 5 OS=Rattus norvegicus GN=Igsf5
PE=1 SV=1
Length = 369
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKIS-PGANPV 70
DS ++II N D+G +C L+ +S V+ L+ ++ P +N +
Sbjct: 88 DSFISEMIIHNVQL-NDSGPVQCSLQ--------NSNVFGFAFLSVQVMGTLNIPSSNLI 138
Query: 71 ATEGRAIELVCSTSGGSPDPQISVTLQV 98
TEG + C G +P P IS L+V
Sbjct: 139 VTEGEPCNVTCYAVGWTPLPNISWELEV 166
>sp|Q6DJ83|CADM2_XENTR Cell adhesion molecule 2 OS=Xenopus tropicalis GN=cadm2 PE=2 SV=1
Length = 433
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 2 DKVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61
+++E++ R + IS+ S D G++ C L S+ Y + VL P+ P
Sbjct: 75 NRIELV--RASWHELSISISDVSLS-DEGQYTCSLFTMPVKT---SKAY-LMVLGVPENP 127
Query: 62 KISPGANPVATEGRAIELVCSTSGGSPDPQI 92
IS +PV EG I+L C +SG P I
Sbjct: 128 HISGFTSPVM-EGDTIQLTCKSSGSKPAADI 157
>sp|D3YX43|VSI10_MOUSE V-set and immunoglobulin domain-containing protein 10 OS=Mus
musculus GN=Vsig10 PE=4 SV=2
Length = 558
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 6/91 (6%)
Query: 5 EIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKIS 64
E + + + L++ + + + G + C SG+ + PP P+ S
Sbjct: 195 EFLGKNLSANSFTLMLMSQNLQ---GNYTCSATNVLSGRQRKVTTELLVYWPPPSAPQCS 251
Query: 65 PGANPVATEGRAIELVCSTSGGSPDPQISVT 95
V++E +EL C+ GG PDP T
Sbjct: 252 V---EVSSESTTLELACNWDGGYPDPTFLWT 279
>sp|P33681|CD80_HUMAN T-lymphocyte activation antigen CD80 OS=Homo sapiens GN=CD80 PE=1
SV=1
Length = 288
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 18/91 (19%)
Query: 4 VEIIDYRP-DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPK 62
+ I+ RP D G Y+ ++ +E+D K E H T++V P
Sbjct: 101 IVILALRPSDEGTYECVV--LKYEKDAFKRE------------HLAEVTLSVKADFPTPS 146
Query: 63 ISPGANPVATEGRAIELVCSTSGGSPDPQIS 93
IS P + R ++CSTSGG P+P +S
Sbjct: 147 ISDFEIPTSNIRR---IICSTSGGFPEPHLS 174
>sp|Q9R044|NPHN_RAT Nephrin OS=Rattus norvegicus GN=Nphs1 PE=1 SV=2
Length = 1252
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 28 DNGKFECRLKAAGSGQDLHSQV---YTVTVLTPPQPPKIS-PGANPVATE-GRAIELVCS 82
DNG+ L GS L + + +T+ +L PP PP I PG N G +EL C+
Sbjct: 224 DNGQL---LVCEGSNPALDTPIKASFTMNILFPPGPPVIDWPGLNEGHVRAGENLELPCT 280
Query: 83 TSGGSP 88
GG+P
Sbjct: 281 ARGGNP 286
>sp|Q9BX67|JAM3_HUMAN Junctional adhesion molecule C OS=Homo sapiens GN=JAM3 PE=1 SV=1
Length = 310
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKIS-PGANPVAT 72
G+ L I N + RD+ + C + A +++ V +TV P P P A PV
Sbjct: 96 GKTSLKIWNVT-RRDSALYRCEVVARNDRKEIDEIVIELTVQVKPVTPVCRVPKAVPV-- 152
Query: 73 EGRAIELVCSTSGGSPDPQIS 93
G+ L C S G P P S
Sbjct: 153 -GKMATLHCQESEGHPRPHYS 172
>sp|A2A8L5|PTPRF_MOUSE Receptor-type tyrosine-protein phosphatase F OS=Mus musculus
GN=Ptprf PE=1 SV=1
Length = 1898
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 3 KVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPK 62
+ E+I++ +G L I +RD +EC A S ++++ ++VL Q P
Sbjct: 77 RFEVIEFDDGAGSV-LRIQPLRVQRDEAIYEC--TATNSLGEINTSA-KLSVLEEDQLPS 132
Query: 63 ISPGAN-----PVATEGRAIELVCSTSGGSPDPQIS 93
P + V +GR ++C+ +GG+PDP+IS
Sbjct: 133 GFPTIDMGPQLKVVEKGRTATMLCA-AGGNPDPEIS 167
>sp|P10586|PTPRF_HUMAN Receptor-type tyrosine-protein phosphatase F OS=Homo sapiens
GN=PTPRF PE=1 SV=2
Length = 1907
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 3 KVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL----TPP 58
+ E+I++ +G L I +RD +EC A S ++++ ++VL PP
Sbjct: 77 RFEVIEFDDGAGSV-LRIQPLRVQRDEAIYEC--TATNSLGEINTSA-KLSVLEEEQLPP 132
Query: 59 QPPKISPGAN-PVATEGRAIELVCSTSGGSPDPQIS 93
P I G V + R ++C+ +GG+PDP+IS
Sbjct: 133 GFPSIDMGPQLKVVEKARTATMLCA-AGGNPDPEIS 167
>sp|P15364|AMAL_DROME Protein amalgam OS=Drosophila melanogaster GN=Ama PE=2 SV=2
Length = 333
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVAT 72
S Y I N D G +EC++ + + + ++ ++ + TPP + +P + V T
Sbjct: 97 SAIYTFRIQNIEVS-DMGPYECQVLVSATEKV--TKKLSLQIKTPPVIAENTPKSTLV-T 152
Query: 73 EGRAIELVCSTSGGSPDPQIS 93
EG+ +EL C + G P P IS
Sbjct: 153 EGQNLELTCH-ANGFPKPTIS 172
>sp|Q62556|BT1A1_MOUSE Butyrophilin subfamily 1 member A1 OS=Mus musculus GN=Btn1a1 PE=1
SV=2
Length = 524
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATE 73
GR L+I + D G++ C K D + V P+IS E
Sbjct: 106 GRATLLIRDVRVS-DQGEYRCLFK---DNDDFEEAAVYLKVAAVGSDPQISM----TVQE 157
Query: 74 GRAIELVCSTSGGSPDPQI 92
+EL C++SG P+PQ+
Sbjct: 158 NGEMELECTSSGWYPEPQV 176
>sp|P20917|MAG_MOUSE Myelin-associated glycoprotein OS=Mus musculus GN=Mag PE=1 SV=2
Length = 626
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 28 DNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGS 87
++G + C L GQD ++ ++V+ P P ++ VA EG + ++CST +
Sbjct: 299 EDGVYAC-LAENAYGQD--NRTVELSVMYAPWKPTVN--GTVVAVEGETVSILCSTQ-SN 352
Query: 88 PDPQISV 94
PDP +++
Sbjct: 353 PDPILTI 359
>sp|B0V2N1|PTPRS_MOUSE Receptor-type tyrosine-protein phosphatase S OS=Mus musculus
GN=Ptprs PE=1 SV=1
Length = 1907
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 3 KVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL----TPP 58
+ E ID+ SG L I RD +EC + + +H+++ TVL PP
Sbjct: 77 RFETIDFDESSGAV-LRIQPLRTPRDENVYECVAQNSVGEITIHAKL---TVLREDQLPP 132
Query: 59 QPPKISPGAN-PVATEGRAIELVCSTSGGSPDPQIS 93
P I G V R ++C+ SG +PDP+I+
Sbjct: 133 GFPNIDMGPQLKVVERTRTATMLCAASG-NPDPEIT 167
>sp|P07722|MAG_RAT Myelin-associated glycoprotein OS=Rattus norvegicus GN=Mag PE=1
SV=1
Length = 626
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 28 DNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGS 87
++G + C L GQD ++ ++V+ P P ++ VA EG + ++CST +
Sbjct: 299 EDGIYAC-LAENAYGQD--NRTVELSVMYAPWKPTVN--GTVVAVEGETVSILCSTQ-SN 352
Query: 88 PDPQISV 94
PDP +++
Sbjct: 353 PDPILTI 359
>sp|P42081|CD86_HUMAN T-lymphocyte activation antigen CD86 OS=Homo sapiens GN=CD86 PE=1
SV=2
Length = 329
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 12 DSGRYDLIISNASFERDNGKFECRL--KAAGSGQDLHSQVYTVTVLTPPQPPKISPGANP 69
DS + L + N +D G ++C + K +H ++VL P+I P +N
Sbjct: 89 DSDSWTLRLHNLQI-KDKGLYQCIIHHKKPTGMIRIHQMNSELSVLANFSQPEIVPISN- 146
Query: 70 VATEGRAIELVCSTSGGSPDP-QISVTLQ 97
TE I L CS+ G P+P ++SV L+
Sbjct: 147 -ITENVYINLTCSSIHGYPEPKKMSVLLR 174
>sp|Q9QZS7|NPHN_MOUSE Nephrin OS=Mus musculus GN=Nphs1 PE=1 SV=2
Length = 1256
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 28 DNGKFECRLKAAGSGQDLHSQV---YTVTVLTPPQPPKIS-PGANPVATE-GRAIELVCS 82
DNG+ L GS L + + +T+ +L PP PP I PG N G +EL C
Sbjct: 224 DNGQL---LVCEGSNPALATPIKASFTMNILFPPGPPVIDWPGLNEGHVRAGENLELPCI 280
Query: 83 TSGGSP 88
GG+P
Sbjct: 281 ARGGNP 286
>sp|Q64605|PTPRS_RAT Receptor-type tyrosine-protein phosphatase S OS=Rattus norvegicus
GN=Ptprs PE=1 SV=2
Length = 1907
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 3 KVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL----TPP 58
+ E ID+ SG L I RD +EC + + +H+++ TVL PP
Sbjct: 77 RFETIDFDESSGAV-LRIQPLRTPRDENVYECVAQNSVGEITVHAKL---TVLREDQLPP 132
Query: 59 QPPKISPGAN-PVATEGRAIELVCSTSGGSPDPQIS 93
P I G V R ++C+ SG +PDP+I+
Sbjct: 133 GFPNIDMGPQLKVVERTRTATMLCAASG-NPDPEIT 167
>sp|O08775|VGFR2_RAT Vascular endothelial growth factor receptor 2 OS=Rattus norvegicus
GN=Kdr PE=1 SV=1
Length = 1343
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 20 ISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIEL 79
NAS + D G + C + + + H V + +L P N T G IE+
Sbjct: 625 FQNASLQ-DQGNYVCSAQDKKTKKR-HCLVKQLVILERMAPMITGNLENQTTTIGETIEV 682
Query: 80 VCSTSGGSPDPQIS 93
VC TS G+P P I+
Sbjct: 683 VCPTS-GNPTPLIT 695
>sp|P20916|MAG_HUMAN Myelin-associated glycoprotein OS=Homo sapiens GN=MAG PE=1 SV=1
Length = 626
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 28 DNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGS 87
++G + C L GQD ++ ++V+ P P ++ VA EG + ++CST +
Sbjct: 299 EDGVYAC-LAENAYGQD--NRTVGLSVMYAPWKPTVN--GTMVAVEGETVSILCSTQ-SN 352
Query: 88 PDPQISV 94
PDP +++
Sbjct: 353 PDPILTI 359
>sp|Q7TNR6|IGS21_MOUSE Immunoglobulin superfamily member 21 OS=Mus musculus GN=Igsf21 PE=2
SV=1
Length = 468
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 28 DNGKFECRL----KAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPV---ATEGRAIELV 80
DNG +EC + +A L S + V+ PP ++ +P + + LV
Sbjct: 110 DNGPYECHVGIYDRATREKVVLASGNIFLNVMAPPTSIEVVAADSPAPFSRYQAQNFTLV 169
Query: 81 CSTSGGSPDPQI 92
C SGG P P +
Sbjct: 170 CIVSGGKPAPMV 181
>sp|Q88A43|LPTD_PSESM LPS-assembly protein LptD OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=lptD PE=3 SV=2
Length = 927
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 7 IDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQD 44
DY+ ++ R+D + +F +NG FE RL SG D
Sbjct: 503 FDYQTEAVRFDRDLRTGTFVDENGNFESRLDNNISGLD 540
>sp|O75147|OBSL1_HUMAN Obscurin-like protein 1 OS=Homo sapiens GN=OBSL1 PE=1 SV=4
Length = 1896
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Query: 1 MDKVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP 58
+++ E++ + D ++ LI+ A + D+G+FECR + S + VTV PP
Sbjct: 756 VEESELLVVKMDGRKHRLILPEAKVQ-DSGEFECRTEGV-------SAFFGVTVQDPP 805
>sp|Q96ID5|IGS21_HUMAN Immunoglobulin superfamily member 21 OS=Homo sapiens GN=IGSF21 PE=2
SV=1
Length = 467
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 28 DNGKFECRL----KAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPV---ATEGRAIELV 80
DNG +EC + +A L S + V+ PP ++ P + + LV
Sbjct: 110 DNGPYECHVGIYDRATREKVVLASGNIFLNVMAPPTSIEVVAADTPAPFSRYQAQNFTLV 169
Query: 81 CSTSGGSPDPQI 92
C SGG P P +
Sbjct: 170 CIVSGGKPAPMV 181
>sp|P50895|BCAM_HUMAN Basal cell adhesion molecule OS=Homo sapiens GN=BCAM PE=1 SV=2
Length = 628
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 18 LIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ--PPKISPGANPVATEGR 75
L +S+ +F+ NG + C +Q +T+ V P+ +I P A+ EG
Sbjct: 409 LSLSSITFD-SNGTYVCEASLPTVPVLSRTQNFTLLVQGSPELKTAEIEPKADGSWREGD 467
Query: 76 AIELVCSTSGGSPDPQISVT 95
+ L+CS G PDP++S +
Sbjct: 468 EVTLICSAR-GHPDPKLSWS 486
>sp|A7MBJ4|PTPRF_BOVIN Receptor-type tyrosine-protein phosphatase F OS=Bos taurus GN=PTPRF
PE=2 SV=1
Length = 1898
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 3 KVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPK 62
+ E+I++ +G L I +RD +EC A S ++++ ++VL Q P
Sbjct: 77 RFEVIEFDDGAGSV-LRIQPLRVQRDEAIYEC--TATNSLGEINTSA-KLSVLEEEQLPL 132
Query: 63 ISPGAN-----PVATEGRAIELVCSTSGGSPDPQIS 93
P + V + R ++C+ +GG+PDP+IS
Sbjct: 133 GFPSIDMGPQLKVVEKARTATMLCA-AGGNPDPEIS 167
>sp|Q64604|PTPRF_RAT Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus
GN=Ptprf PE=2 SV=1
Length = 1898
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 3 KVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPK 62
+ E+I++ +G L I +RD +EC A S ++++ ++VL Q P
Sbjct: 77 RFEVIEFDDGAGSV-LRIQPLRVQRDEAIYEC--TATNSLGEINTSA-KLSVLEEDQLPS 132
Query: 63 ISPGAN-----PVATEGRAIELVCSTSGGSPDPQIS 93
P + V + R ++C+ +GG+PDP+IS
Sbjct: 133 GFPTIDMGPQLKVVEKARTATMLCA-AGGNPDPEIS 167
>sp|O01761|UNC89_CAEEL Muscle M-line assembly protein unc-89 OS=Caenorhabditis elegans
GN=unc-89 PE=1 SV=3
Length = 8081
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ-PPKISP 65
SG Y + I +A E D+GK+ CR + V L PP+ K+SP
Sbjct: 3340 SGSYSITIKDARLE-DSGKYACRATNPAGEAKTEANFAVVKNLVPPEFVEKLSP 3392
>sp|Q8JFR5|KITA_DANRE Mast/stem cell growth factor receptor kita OS=Danio rerio GN=kita
PE=2 SV=2
Length = 976
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 11 PDSGRYDLII-SNASFERDNGKFECRLKAAGS--GQDLHSQVYTVTV-LTPPQPPKISPG 66
P+S RY + + S E+ +FE G+ + S Y +TV L P PP I+ G
Sbjct: 152 PNSLRYSASLETGVSVEKVRKEFEGCYVCVGTLDAATVKSGRYQLTVRLVPDAPPPITLG 211
Query: 67 A--NPVATEGRAIELVCSTSGGSPD 89
+ T+G + L CSTS + D
Sbjct: 212 QPQRVLLTQGEKLSLSCSTSNVNSD 236
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,808,231
Number of Sequences: 539616
Number of extensions: 1652415
Number of successful extensions: 4033
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 3974
Number of HSP's gapped (non-prelim): 142
length of query: 98
length of database: 191,569,459
effective HSP length: 67
effective length of query: 31
effective length of database: 155,415,187
effective search space: 4817870797
effective search space used: 4817870797
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)