Query psy5866
Match_columns 98
No_of_seqs 102 out of 1109
Neff 10.1
Searched_HMMs 29240
Date Fri Aug 16 20:01:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5866.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5866hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fa8_A Secreted protein BARF1; 99.6 2.4E-15 8.3E-20 90.9 6.2 82 8-96 61-142 (203)
2 3nl4_L Antigen binding fragmen 99.6 8.4E-15 2.9E-19 87.9 7.8 91 6-97 61-152 (213)
3 3jz7_A MCAR, CAR, coxsackievir 99.6 2.9E-14 9.7E-19 85.0 9.4 78 13-96 81-158 (214)
4 2if7_A SLAM family member 6; N 99.5 2.6E-14 9.1E-19 85.3 7.9 78 15-97 69-147 (193)
5 1vca_A VCAM-D1,2, human vascul 99.5 8.6E-14 2.9E-18 83.7 9.8 78 14-97 52-131 (202)
6 1dr9_A B7-1 (CD80), T lymphocy 99.5 6E-14 2E-18 83.5 9.0 80 14-97 63-144 (201)
7 2zg1_A Sialic acid-binding IG- 99.5 4.2E-14 1.4E-18 84.7 7.8 82 13-97 79-164 (214)
8 3mj8_L Stimulatory hamster ant 99.5 6.4E-14 2.2E-18 84.0 8.4 91 6-97 60-153 (213)
9 3sbw_C Programmed cell death 1 99.5 1.7E-13 5.6E-18 82.5 9.8 78 12-97 76-153 (222)
10 1f97_A Junction adhesion molec 99.5 7.2E-13 2.5E-17 78.9 11.8 78 16-97 65-142 (212)
11 2a38_A Titin; Z1Z2, structural 99.5 2.7E-13 9.2E-18 79.9 9.2 82 11-97 58-140 (194)
12 3bp6_B Programmed cell death 1 99.5 1.6E-13 5.4E-18 81.7 8.2 76 14-97 65-140 (202)
13 1c1e_H Catalytic antibody 1E9 99.5 1.4E-13 4.9E-18 82.9 8.0 84 13-97 76-163 (219)
14 2pet_A Lutheran blood group gl 99.5 4.2E-13 1.4E-17 81.0 9.9 78 17-97 78-157 (231)
15 3ux9_B SCFV antibody; five hel 99.5 2.5E-13 8.5E-18 83.6 9.0 90 6-97 64-173 (256)
16 1pz5_B Heavy chain of FAB (SYA 99.5 1.8E-13 6.2E-18 82.6 7.9 85 12-97 77-164 (220)
17 2ghw_B Anti-SARS SCFV antibody 99.5 1.1E-12 3.8E-17 80.3 11.4 84 11-97 76-172 (247)
18 1gsm_A Madcam-1, mucosal addre 99.5 5.1E-13 1.8E-17 81.4 9.5 77 13-97 56-136 (210)
19 2d3v_A Leukocyte immunoglobuli 99.5 4.9E-13 1.7E-17 79.6 9.2 82 12-97 54-135 (196)
20 2dru_A Chimera of CD48 antigen 99.5 2.8E-13 9.7E-18 80.3 8.1 71 14-97 67-137 (180)
21 3omz_A Human vdelta1 gamma del 99.5 5.1E-13 1.8E-17 82.5 9.6 86 11-97 74-174 (259)
22 1c5d_H Monoclonal antibody aga 99.5 2.7E-13 9.2E-18 81.9 8.0 86 11-97 73-161 (215)
23 4i0k_A CD276 antigen; immunogl 99.5 2.8E-14 9.4E-19 86.0 3.6 78 14-96 70-147 (222)
24 1dee_B IGM RF 2A2; FAB-IBP com 99.5 6.6E-13 2.3E-17 80.6 9.8 85 11-96 74-164 (223)
25 2xzc_L FAB A.17 light chain; i 99.5 2.4E-13 8.2E-18 81.8 7.5 90 6-97 62-153 (216)
26 2fbj_H IGA-kappa J539 FAB (hea 99.5 3.5E-13 1.2E-17 81.7 8.2 85 12-97 75-162 (220)
27 3sob_L Antibody light chain; b 99.5 1.2E-13 4.1E-18 83.8 6.1 89 6-97 84-174 (237)
28 3juy_B 3B3 single chain varian 99.5 1.5E-12 5E-17 80.3 10.8 86 10-97 79-187 (256)
29 3s96_B 3B5H10 FAB light chain; 99.5 2.7E-13 9.3E-18 81.4 7.3 85 12-97 71-160 (218)
30 2v44_A NCAM2, neural cell adhe 99.5 1.3E-12 4.3E-17 76.9 10.1 86 6-97 48-133 (189)
31 1op3_H FAB 2G12, heavy chain; 99.5 6.2E-13 2.1E-17 80.8 8.9 86 11-97 74-167 (225)
32 3r06_A Anti-mouse CD3epsilon a 99.4 2.2E-13 7.6E-18 81.6 6.6 89 6-97 61-151 (213)
33 1q9r_B S25-2 FAB (IGG1K) heavy 99.4 4.4E-13 1.5E-17 81.0 7.9 85 12-97 77-166 (222)
34 1nfd_E H57 FAB; complex (immun 99.4 1.9E-13 6.6E-18 81.9 6.2 91 6-97 59-152 (212)
35 3gkz_A Anti-methamphetamine si 99.4 2.4E-12 8.1E-17 79.4 11.1 85 11-97 81-179 (257)
36 1qok_A MFE-23 recombinant anti 99.4 2.4E-12 8E-17 80.7 11.2 84 11-97 100-198 (282)
37 3d9a_H Heavy chain of hyhel10 99.4 2.4E-13 8.2E-18 81.6 6.4 81 12-97 74-157 (210)
38 1f3r_B FV antibody fragment; I 99.4 7.8E-13 2.7E-17 81.7 8.8 84 12-97 74-176 (257)
39 2fbo_J V1V2;, variable region- 99.4 4.5E-13 1.5E-17 81.7 7.5 82 14-97 88-173 (250)
40 3tv3_L PGT128 light chain, IG 99.4 4E-13 1.4E-17 80.4 6.9 90 6-97 58-150 (211)
41 2rik_A Titin; I-SET IG fold, p 99.4 1.8E-12 6.1E-17 80.5 10.0 81 11-97 56-136 (284)
42 4fom_A Poliovirus receptor-rel 99.4 5.2E-13 1.8E-17 83.9 7.6 82 13-97 71-152 (308)
43 1mju_H Immunoglobulin MS6-12; 99.4 9.5E-13 3.2E-17 80.2 8.5 83 12-97 75-160 (227)
44 1nbq_A JAM, junctional adhesio 99.4 3.9E-13 1.3E-17 79.9 6.6 78 16-97 68-145 (209)
45 1svz_A Immunoglobulin;, single 99.4 8.3E-13 2.8E-17 80.9 8.2 89 6-97 66-166 (247)
46 3bae_H WO2 IGG2A FAB fragment 99.4 1E-12 3.6E-17 79.9 8.5 85 12-97 76-169 (228)
47 1nqb_A Single-chain antibody f 99.4 3E-12 1E-16 79.2 10.7 83 11-97 74-163 (256)
48 4f80_A Butyrophilin subfamily 99.4 2.1E-12 7.1E-17 78.2 9.8 78 12-97 79-156 (226)
49 1q0x_L FAB 9B1, light chain; a 99.4 8.1E-13 2.8E-17 79.2 7.8 89 6-97 63-154 (212)
50 3pv7_A B7-H6, IG-like domain-c 99.4 4.9E-13 1.7E-17 81.9 7.0 78 13-97 79-157 (248)
51 1ugn_A LIR1, leukocyte immunog 99.4 1.8E-12 6.1E-17 77.2 9.2 80 15-97 57-136 (198)
52 3r4d_A CEA-related cell adhesi 99.4 2.9E-12 1E-16 76.3 10.1 75 17-97 72-146 (208)
53 1oll_A NK receptor; immune sys 99.4 2.8E-12 9.7E-17 75.9 10.0 82 12-97 53-134 (188)
54 1lk3_L 9D7 light chain; antige 99.4 5.7E-13 2E-17 79.8 7.0 89 6-97 60-150 (210)
55 3d9a_L Light chain of hyhel10 99.4 4.5E-13 1.5E-17 80.3 6.4 89 6-97 61-151 (213)
56 2rik_A Titin; I-SET IG fold, p 99.4 3.7E-12 1.3E-16 79.0 10.8 79 12-97 151-229 (284)
57 2wv3_A Neuroplastin; igcam, me 99.4 3.7E-12 1.3E-16 75.1 10.2 75 14-96 54-128 (190)
58 3eow_R Poliovirus receptor; im 99.4 1.1E-13 3.8E-18 83.5 3.7 79 13-97 75-154 (221)
59 2c5d_C AXL oncogene, tyrosine- 99.4 1.1E-11 3.7E-16 73.3 12.1 77 15-97 67-144 (195)
60 1epf_A NCAM, protein (neural c 99.4 4.1E-12 1.4E-16 74.7 10.2 79 13-97 59-137 (191)
61 1uct_A Immunoglobulin alpha FC 99.4 3.5E-12 1.2E-16 77.5 10.2 78 17-97 65-142 (218)
62 3umt_A SCFV heavy chain and li 99.4 3.2E-12 1.1E-16 78.8 10.2 85 11-97 76-175 (256)
63 3esu_F Antibody 14B7* light ch 99.4 1.2E-12 4.1E-17 80.3 8.2 88 6-97 64-170 (250)
64 2p1y_A Bispecific alpha/beta T 99.4 3.8E-12 1.3E-16 77.4 10.3 84 12-97 69-164 (238)
65 3nl4_H Antigen binding fragmen 99.4 7.4E-13 2.5E-17 79.7 7.1 91 6-97 65-159 (215)
66 2yd6_A PTPRD protein; hydrolas 99.4 1.3E-11 4.4E-16 74.1 12.3 79 14-97 61-145 (212)
67 2znx_A SCFV; fluorotryptohpan, 99.4 1.2E-12 4E-17 80.3 7.9 88 6-97 61-161 (242)
68 1nkr_A P58-CL42 KIR; inhibitor 99.4 4.7E-12 1.6E-16 75.6 10.3 82 13-97 60-143 (201)
69 1moe_A Anti-CEA MAB T84.66; an 99.4 1.7E-12 5.8E-17 79.1 8.5 88 6-97 65-158 (240)
70 2wng_A Tyrosine-protein phosph 99.4 2.4E-12 8.1E-17 81.6 9.4 82 13-97 71-156 (327)
71 3uzq_A Anti-dengue MAB 4E11; d 99.4 3E-12 1E-16 78.8 9.5 87 7-97 71-174 (253)
72 3liz_H 4C3 monoclonal antibody 99.4 1E-12 3.5E-17 81.2 7.3 87 10-97 73-163 (253)
73 1za6_B IGG heavy chain; immuno 99.4 7.7E-13 2.6E-17 84.7 6.9 83 11-97 74-159 (344)
74 3b43_A Titin; I-SET IG fold, e 99.4 1.2E-11 4E-16 84.0 12.9 87 6-97 51-138 (570)
75 1rhf_A Tyrosine-protein kinase 99.4 6.4E-12 2.2E-16 73.5 10.0 77 15-97 59-136 (182)
76 3lcy_A Titin; A-BAND, IG tande 99.4 9.1E-13 3.1E-17 77.6 6.4 87 6-97 53-140 (197)
77 1hng_A CD2; T lymphocyte adhes 99.4 6.9E-12 2.4E-16 73.9 10.1 71 17-97 62-132 (176)
78 2gjj_A A21 single-chain antibo 99.4 3.4E-12 1.1E-16 79.4 9.1 89 6-97 71-177 (264)
79 2xqy_G A13-D6.3 monoclonal ant 99.4 1.9E-12 6.4E-17 80.7 7.9 85 12-97 81-168 (261)
80 3auv_A SC-DSFV derived from th 99.4 1.4E-12 4.6E-17 81.5 7.1 89 6-97 72-173 (276)
81 3qhz_H Human monoclonal antibo 99.4 2.8E-12 9.6E-17 78.1 8.4 88 9-97 76-171 (232)
82 1dn0_B IGM-kappa cold agglutin 99.4 4E-12 1.4E-16 77.7 9.1 85 11-96 73-164 (232)
83 1hnf_A CD2; T lymphocyte adhes 99.4 7.3E-12 2.5E-16 74.5 9.9 71 17-97 67-137 (182)
84 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.4 1.1E-11 3.8E-16 76.5 11.1 85 10-97 70-173 (256)
85 1hxm_B Gamma-delta T-cell rece 99.4 5.7E-12 2E-16 77.3 9.5 84 13-97 77-171 (242)
86 2ocw_A Polymeric-immunoglobuli 99.4 7.3E-12 2.5E-16 84.6 10.8 80 12-97 71-150 (585)
87 2yd1_A Tyrosine-protein phosph 99.4 8.7E-12 3E-16 74.7 10.0 82 12-97 60-147 (212)
88 3q5y_A TCR N15 beta; IG, T cel 99.4 2.2E-12 7.5E-17 78.7 7.4 85 12-97 71-161 (240)
89 3p2t_A Leukocyte immunoglobuli 99.4 4.5E-12 1.5E-16 75.3 8.5 81 13-97 55-135 (196)
90 2r15_A Myomesin-1; sarcomeric 99.4 1.6E-12 5.5E-17 77.5 6.6 87 6-97 49-154 (212)
91 3m8o_H Immunoglobulin A1 heavy 99.4 2.3E-12 7.9E-17 77.8 7.2 85 10-97 75-163 (221)
92 2j8h_A Titin, connectin; cardi 99.4 2.4E-12 8.3E-17 76.0 7.2 81 12-97 58-141 (197)
93 3bkj_L WO2 IGG2A FAB fragment 99.4 9.9E-13 3.4E-17 80.9 5.6 89 6-97 99-189 (252)
94 2gi7_A GPVI protein; IG-like d 99.4 5E-12 1.7E-16 74.6 8.4 79 15-97 51-129 (184)
95 3rbs_A Myomesin-1; immunoglobu 99.4 7E-12 2.4E-16 75.7 9.2 84 7-97 52-154 (207)
96 2j6e_L IGM, FAB light chain; a 99.4 6.2E-13 2.1E-17 80.7 4.2 91 6-97 81-174 (234)
97 2va4_A NCAM2, N-CAM 2, neural 99.4 7.8E-12 2.7E-16 73.4 8.8 75 15-97 57-131 (192)
98 1ccz_A Protein (CD58); LFA-3, 99.3 5.2E-12 1.8E-16 74.2 7.6 69 15-97 59-127 (171)
99 2rcj_C Light chain; immunoglob 99.3 1.3E-11 4.5E-16 82.5 10.3 92 5-97 59-153 (523)
100 3pl6_D MBP peptide / T-cell re 99.3 2.8E-12 9.4E-17 79.5 6.4 90 6-97 89-185 (268)
101 1bec_A 14.3.D T cell antigen r 99.3 5.3E-12 1.8E-16 77.2 7.6 84 13-97 69-160 (238)
102 2c1o_A IGK-C protein; FAB frag 99.3 2.9E-12 1E-16 78.7 6.4 89 6-97 103-193 (254)
103 3u83_A Poliovirus receptor-rel 99.3 9.7E-12 3.3E-16 78.6 8.8 83 12-97 88-173 (331)
104 3kld_A Contactin 4, axcam, BIG 99.3 6.2E-12 2.1E-16 81.6 8.0 76 15-97 257-332 (384)
105 3bn9_D E2 FAB heavy chain; ant 99.3 2.6E-12 8.9E-17 80.0 5.9 86 11-97 74-172 (257)
106 3b43_A Titin; I-SET IG fold, e 99.3 4.4E-11 1.5E-15 81.2 12.3 80 13-97 154-234 (570)
107 3o3u_N Maltose-binding peripla 99.3 1.1E-11 3.7E-16 84.0 9.1 77 17-97 433-510 (581)
108 2jll_A NCAM2, neural cell adhe 99.3 1.5E-11 5.1E-16 79.2 9.1 84 6-97 53-137 (389)
109 1x9q_A SCFV, 4M5.3 anti-fluore 99.3 6.2E-12 2.1E-16 78.1 6.9 89 6-97 80-190 (268)
110 3grw_A Fibroblast growth facto 99.3 3.6E-11 1.2E-15 73.0 10.1 77 15-96 71-150 (241)
111 2wim_A N-CAM 2, NCAM2, neural 99.3 1.6E-11 5.5E-16 76.3 8.7 86 6-97 50-135 (291)
112 2y23_A Myomesin; structural pr 99.3 4.2E-12 1.5E-16 79.5 6.0 86 6-97 48-145 (312)
113 1b6u_A KIR2DL3, P58 killer cel 99.3 4.2E-11 1.4E-15 74.6 10.4 82 13-97 59-142 (257)
114 1igt_B IGG2A intact antibody - 99.3 1.7E-11 5.9E-16 80.6 9.1 86 11-97 74-162 (444)
115 3n9g_H FAB fragment of MAB CR4 99.3 3.4E-11 1.2E-15 73.3 9.8 85 9-94 72-164 (230)
116 4ei6_B Vbeta16 XV19 type II na 99.3 6.5E-12 2.2E-16 76.7 6.6 85 12-97 72-163 (245)
117 3ojm_B Fibroblast growth facto 99.3 2.2E-11 7.7E-16 73.2 8.9 77 15-96 75-154 (231)
118 4frw_A Poliovirus receptor-rel 99.3 2.2E-11 7.5E-16 72.3 8.7 80 13-97 76-155 (218)
119 4dzb_B Vbeta2 (MAIT T cell rec 99.3 3.8E-12 1.3E-16 77.9 5.4 84 13-97 74-164 (246)
120 3nfj_J T cell receptor beta ch 99.3 9.3E-12 3.2E-16 76.1 7.1 85 12-97 70-163 (245)
121 3mj6_A Junctional adhesion mol 99.3 9.9E-12 3.4E-16 76.6 7.2 76 12-96 80-157 (268)
122 1fnl_A Low affinity immunoglob 99.3 1.3E-11 4.4E-16 72.2 7.4 75 14-97 52-126 (175)
123 1p6f_A NKP46, natural cytotoxi 99.3 4.2E-11 1.4E-15 73.9 10.0 81 13-97 57-137 (242)
124 2yd9_A Receptor-type tyrosine- 99.3 4.6E-11 1.6E-15 74.9 10.3 79 14-97 61-145 (304)
125 3qib_D 2B4 beta chain; IG doma 99.3 9.3E-12 3.2E-16 77.3 6.8 91 6-97 90-188 (270)
126 1ypz_F T-cell receptor gamma c 99.3 1.6E-11 5.5E-16 74.9 7.8 91 5-96 66-168 (230)
127 3sgj_C Human FCG3A receptor; r 99.3 1.2E-11 4.3E-16 74.3 7.1 73 16-97 54-126 (204)
128 1f2q_A High affinity immunoglo 99.3 6.1E-12 2.1E-16 73.6 5.5 76 13-97 48-123 (176)
129 1iga_A IGA1; immunoglobulin; N 99.3 4.9E-11 1.7E-15 79.3 10.5 85 12-97 76-166 (475)
130 4fqp_A Poliovirus receptor; im 99.3 9.8E-12 3.4E-16 78.4 6.8 80 13-97 76-155 (313)
131 2wbj_D OB TCR; transmembrane, 99.3 8.5E-12 2.9E-16 78.0 6.4 91 6-97 89-189 (279)
132 1qgc_4 Protein (immunoglobulin 99.3 7.6E-12 2.6E-16 81.8 6.2 89 6-97 65-155 (438)
133 3fku_X Neutralizing antibody F 99.3 2.3E-11 7.9E-16 76.2 8.2 86 11-97 74-178 (280)
134 3bqu_C 3H6 FAB light chain; be 99.3 6.2E-13 2.1E-17 80.7 0.9 82 13-97 90-173 (233)
135 3u2s_H PG9 heavy chain; greek 99.3 2.1E-11 7.1E-16 75.4 7.5 87 10-97 72-180 (248)
136 3tv3_H PGT128 heavy chain, IG 99.3 2.3E-11 8E-16 74.6 7.7 86 11-97 81-179 (239)
137 1qgc_4 Protein (immunoglobulin 99.3 3.6E-11 1.2E-15 78.6 8.9 86 11-97 292-382 (438)
138 2vr9_A Roundabout 1, ROBO; imm 99.3 6.4E-12 2.2E-16 75.3 4.9 76 18-97 71-146 (217)
139 2ny1_B T-cell surface glycopro 99.3 1.9E-11 6.6E-16 71.7 6.9 71 12-97 64-134 (184)
140 1hzh_H IGG, immunoglobulin hea 99.3 3.5E-11 1.2E-15 79.5 8.8 86 11-97 74-171 (457)
141 3qs7_E FL cytokine receptor; i 99.3 5.3E-12 1.8E-16 83.4 4.7 73 16-97 290-363 (423)
142 2gki_A Nuclease; anti-DNA anti 99.3 4.5E-11 1.5E-15 75.3 8.8 84 12-97 97-202 (291)
143 3iu4_H CHP3 FAB heavy chain; a 99.2 3.4E-11 1.2E-15 75.1 8.0 85 9-94 71-163 (263)
144 2v5t_A NCAM2, N-CAM 2, neural 99.2 6E-12 2E-16 73.7 4.3 78 17-97 58-135 (189)
145 2v5m_A Dscam; neurobiology SPL 99.2 2.2E-11 7.5E-16 78.5 7.2 74 17-97 271-344 (388)
146 1e07_A Carcinoembryonic antige 99.2 1.2E-10 4E-15 79.6 11.1 78 15-97 163-240 (642)
147 1qz1_A Neural cell adhesion mo 99.2 5.1E-11 1.7E-15 74.0 8.6 79 13-97 59-137 (291)
148 2nzi_A Titin; IG-domain, FNIII 99.2 1.9E-11 6.4E-16 76.5 6.6 81 12-97 58-141 (305)
149 2yd9_A Receptor-type tyrosine- 99.2 4.3E-11 1.5E-15 75.1 8.2 76 17-97 165-242 (304)
150 3vh8_G Killer cell immunoglobu 99.2 7E-11 2.4E-15 74.6 9.1 81 14-97 172-254 (316)
151 2y25_A Myomesin; structural pr 99.2 4.1E-11 1.4E-15 75.1 7.9 87 6-97 154-259 (317)
152 1itb_B Type 1 interleukin-1 re 99.2 1.4E-10 4.8E-15 72.9 10.3 79 17-97 163-246 (315)
153 3k0w_A Mucosa-associated lymph 99.2 9.2E-11 3.1E-15 70.7 9.1 80 14-97 63-155 (218)
154 1oga_E TRBC1, T-cell receptor 99.2 1.8E-11 6.3E-16 75.4 6.1 84 13-97 73-162 (252)
155 3oq3_B IFN-alpha/beta binding 99.2 1.8E-10 6.1E-15 73.3 10.5 79 16-97 182-269 (329)
156 4dkd_C Macrophage colony-stimu 99.2 8E-12 2.7E-16 77.7 4.2 84 9-97 44-127 (292)
157 1e07_A Carcinoembryonic antige 99.2 1.1E-10 3.7E-15 79.8 10.0 77 16-97 71-147 (642)
158 3to4_D NKT vbeta2 (mouse varia 99.2 2.6E-11 8.9E-16 74.7 6.3 90 6-97 65-163 (253)
159 3ejj_X Macrophage colony-stimu 99.2 3.3E-11 1.1E-15 74.8 6.9 81 10-96 45-126 (289)
160 3p3y_A Neurofascin; IG domains 99.2 4.2E-11 1.4E-15 77.3 7.5 75 16-97 275-349 (404)
161 3sob_H Antibody heavy chain, l 99.2 8.6E-11 2.9E-15 72.6 8.6 85 9-94 95-190 (256)
162 2wim_A N-CAM 2, NCAM2, neural 99.2 6E-11 2.1E-15 73.7 7.7 78 17-97 154-231 (291)
163 1cs6_A Axonin-1; neural cell a 99.2 5.5E-11 1.9E-15 76.5 7.6 77 14-97 255-331 (382)
164 1iam_A ICAM-1, CD54, intercell 99.2 1.6E-10 5.4E-15 69.1 8.9 77 14-97 48-126 (185)
165 1ry7_B FGFR-3, fibroblast grow 99.2 7.1E-11 2.4E-15 74.8 7.8 79 13-96 177-258 (334)
166 3s97_C Contactin-1; carbonic a 99.2 9.1E-11 3.1E-15 69.1 7.7 80 16-97 66-150 (201)
167 2iep_A Muscle-specific kinase 99.2 5.3E-11 1.8E-15 69.9 6.7 75 17-97 63-137 (192)
168 3ejj_X Macrophage colony-stimu 99.2 2.1E-10 7E-15 71.2 9.6 78 17-97 145-224 (289)
169 3laf_A Deleted in colorectal c 99.2 6.1E-11 2.1E-15 76.6 7.2 74 17-97 276-349 (403)
170 2ocw_A Polymeric-immunoglobuli 99.2 2E-10 6.8E-15 77.6 10.0 79 12-97 402-483 (585)
171 4fmk_A Poliovirus receptor-rel 99.2 1.2E-10 4E-15 69.4 8.0 80 13-97 80-159 (225)
172 2v9r_A Roundabout homolog 1; p 99.2 3.2E-11 1.1E-15 71.8 5.4 76 18-97 74-149 (212)
173 1bih_A Hemolin; insect immunit 99.2 3E-11 1E-15 77.9 5.5 76 16-97 270-346 (395)
174 1qz1_A Neural cell adhesion mo 99.2 2.8E-11 9.4E-16 75.2 4.9 78 17-97 156-233 (291)
175 3rjd_A High affinity immunoglo 99.2 4.9E-10 1.7E-14 68.5 10.3 77 16-97 131-212 (262)
176 2x1w_L Vascular endothelial gr 99.2 8E-11 2.7E-15 70.8 6.6 77 17-97 65-144 (213)
177 4dep_C Interleukin-1 receptor 99.2 3.8E-11 1.3E-15 76.5 5.4 81 16-97 177-267 (349)
178 2ec8_A MAST/stem cell growth f 99.2 1.8E-10 6E-15 77.1 8.8 79 14-97 271-351 (524)
179 3vh8_G Killer cell immunoglobu 99.2 2E-10 6.9E-15 72.5 8.3 80 15-97 73-154 (316)
180 3qs9_E FL cytokine receptor; i 99.1 2.7E-11 9.3E-16 82.0 4.2 73 16-97 290-363 (527)
181 3qs7_E FL cytokine receptor; i 99.1 1.5E-10 5.1E-15 76.5 7.3 75 15-97 102-176 (423)
182 4dep_C Interleukin-1 receptor 99.1 3.7E-10 1.3E-14 71.9 8.9 77 17-97 80-162 (349)
183 3mlr_H Human monoclonal anti-H 99.1 2.1E-10 7.1E-15 69.8 7.3 84 10-94 73-165 (226)
184 1zvo_C Myeloma immunoglobulin 99.1 4.9E-10 1.7E-14 75.4 9.8 91 6-97 68-174 (512)
185 1ypz_E T cell receptor delta, 99.1 2.1E-10 7.3E-15 69.1 7.0 78 12-97 67-156 (207)
186 2o26_X MAST/stem cell growth f 99.1 1.2E-09 4.1E-14 68.0 10.5 77 17-97 146-226 (290)
187 1zxq_A ICAM-2, intercellular a 99.1 1.9E-09 6.5E-14 64.8 10.8 79 12-97 48-128 (192)
188 3ry4_A Low affinity immunoglob 99.1 1.8E-10 6.2E-15 66.6 6.2 73 16-97 51-123 (170)
189 3o4o_C Interleukin-1 receptor 99.1 2E-10 6.7E-15 73.0 6.8 81 16-97 180-267 (339)
190 1igy_B IGG1 intact antibody MA 99.1 1E-11 3.6E-16 81.5 0.8 81 13-97 75-158 (434)
191 2oz4_A Intercellular adhesion 99.1 3.4E-11 1.2E-15 74.4 3.1 82 14-97 140-222 (265)
192 3f8u_B Tapasin; endoplasmic re 99.1 3.6E-10 1.2E-14 74.5 8.1 80 13-97 251-334 (401)
193 3bn3_B ICAM-5, intercellular a 99.1 5.5E-10 1.9E-14 67.3 8.0 75 17-97 53-129 (196)
194 3u83_A Poliovirus receptor-rel 99.1 2.9E-10 9.9E-15 71.8 7.0 75 17-97 195-270 (331)
195 3o4o_C Interleukin-1 receptor 99.1 6.8E-11 2.3E-15 75.1 4.0 77 17-97 82-162 (339)
196 3rjd_A High affinity immunoglo 99.1 3.6E-10 1.2E-14 69.1 6.9 74 15-97 47-120 (262)
197 1z7z_I Intercellular adhesion 99.1 2.2E-11 7.6E-16 80.0 1.6 81 15-97 326-407 (450)
198 3p3y_A Neurofascin; IG domains 99.1 1.8E-10 6.3E-15 74.3 5.5 72 22-97 83-154 (404)
199 3u1s_H FAB PGT145 heavy chain; 99.1 6.2E-10 2.1E-14 69.4 7.7 84 10-94 96-204 (267)
200 1wio_A CD4, T-cell surface gly 99.1 2.3E-10 7.8E-15 73.5 5.8 74 15-97 141-218 (363)
201 3dmk_A DOWN syndrome cell adhe 99.1 2.4E-10 8.3E-15 79.9 6.3 78 13-97 674-751 (816)
202 1wio_A CD4, T-cell surface gly 99.1 2.2E-10 7.7E-15 73.5 5.2 70 13-97 64-133 (363)
203 4dkd_C Macrophage colony-stimu 99.1 7.2E-10 2.5E-14 68.8 7.3 77 18-97 146-224 (292)
204 4fqp_A Poliovirus receptor; im 99.0 3.4E-10 1.2E-14 71.3 5.8 77 17-97 178-255 (313)
205 2vol_A Murine IGG FC; FC, zinc 99.0 2.5E-10 8.6E-15 68.5 4.5 78 16-97 68-148 (207)
206 3dmk_A DOWN syndrome cell adhe 99.0 1.6E-09 5.5E-14 75.8 9.0 79 14-97 387-466 (816)
207 3b5h_A Cervical EMMPRIN, HAB18 99.0 2.6E-09 8.9E-14 62.4 8.6 70 15-96 50-120 (184)
208 2rgs_A I, IG gamma-2B heavy ch 99.0 4.3E-10 1.5E-14 68.0 5.0 78 16-97 76-156 (218)
209 1bih_A Hemolin; insect immunit 99.0 2.2E-10 7.4E-15 73.8 3.8 78 15-97 61-138 (395)
210 1ow0_A IG alpha-1 chain C regi 99.0 2.5E-10 8.7E-15 68.8 3.7 80 14-97 64-146 (214)
211 1hxm_A Gamma-delta T-cell rece 99.0 2.8E-09 9.6E-14 65.3 8.2 79 11-97 70-157 (229)
212 3mjg_X Beta-type platelet-deri 99.0 5.4E-10 1.8E-14 69.5 5.1 78 15-97 50-131 (289)
213 3laf_A Deleted in colorectal c 99.0 1.7E-09 6E-14 69.8 7.5 77 17-97 178-258 (403)
214 1cs6_A Axonin-1; neural cell a 99.0 6.1E-10 2.1E-14 71.6 5.3 77 17-97 62-139 (382)
215 2o26_X MAST/stem cell growth f 99.0 1.9E-09 6.6E-14 67.0 7.5 70 16-96 57-127 (290)
216 3kld_A Contactin 4, axcam, BIG 99.0 1.1E-09 3.9E-14 70.9 6.5 80 16-97 157-242 (384)
217 1jbj_A CD3 epsilon and gamma e 99.0 2.9E-10 1E-14 67.3 3.4 75 15-97 43-141 (186)
218 2rcj_C Light chain; immunoglob 99.0 1.3E-09 4.3E-14 73.0 6.8 76 16-97 281-360 (523)
219 3oq3_B IFN-alpha/beta binding 99.0 2.2E-09 7.6E-14 68.2 7.5 77 15-97 88-166 (329)
220 2y23_A Myomesin; structural pr 99.0 2.6E-09 8.8E-14 66.8 7.6 84 7-97 157-259 (312)
221 3qs9_E FL cytokine receptor; i 99.0 1.1E-09 3.9E-14 74.1 6.2 77 13-97 100-176 (527)
222 1ry7_B FGFR-3, fibroblast grow 99.0 1.8E-10 6.2E-15 72.9 2.2 77 15-97 60-160 (334)
223 3knb_B Obscurin-like protein 1 99.0 2.5E-09 8.6E-14 58.4 6.5 51 4-58 57-107 (107)
224 3c6l_A TCR 2W20 alpha chain; T 98.5 6.4E-11 2.2E-15 70.8 0.0 77 12-96 68-146 (185)
225 3v2a_R Vascular endothelial gr 98.9 1.5E-09 5.1E-14 75.2 6.4 78 15-97 289-367 (772)
226 3v2a_R Vascular endothelial gr 98.9 1.1E-10 3.7E-15 80.9 0.0 79 15-97 624-703 (772)
227 1z7z_I Intercellular adhesion 98.9 6.6E-09 2.2E-13 68.2 8.5 77 13-97 47-126 (450)
228 1iga_A IGA1; immunoglobulin; N 98.9 4.6E-09 1.6E-13 69.8 7.6 79 15-97 308-389 (475)
229 4fom_A Poliovirus receptor-rel 98.9 3E-10 1E-14 71.3 1.5 77 17-97 173-250 (308)
230 2ifg_A High affinity nerve gro 98.9 3.7E-10 1.3E-14 72.4 1.4 75 12-97 208-283 (347)
231 2cqv_A MLCK, myosin light chai 98.9 1.1E-08 3.6E-13 56.0 6.8 53 6-62 53-105 (114)
232 3mjg_X Beta-type platelet-deri 98.9 1.2E-08 4.2E-13 63.3 7.5 68 24-96 149-217 (289)
233 2ec8_A MAST/stem cell growth f 98.9 1.3E-08 4.5E-13 68.1 8.0 77 17-97 169-249 (524)
234 1itb_B Type 1 interleukin-1 re 98.8 4.1E-10 1.4E-14 70.8 0.5 77 17-97 63-146 (315)
235 1mq8_A ICAM-1, intercellular a 98.8 1.5E-08 5.1E-13 64.4 7.6 74 17-97 51-126 (291)
236 3tjh_C 42F3 alpha; IG MHC, ant 98.8 1.5E-08 5.1E-13 62.3 7.2 84 9-97 75-161 (226)
237 3mbe_C I-AG7; T cell receptor, 98.8 6.9E-09 2.4E-13 63.9 5.8 83 10-97 64-149 (229)
238 1igt_B IGG2A intact antibody - 98.8 2.6E-09 8.8E-14 70.3 4.1 78 15-97 304-385 (444)
239 2yuz_A Myosin-binding protein 98.8 1E-08 3.5E-13 55.2 5.6 50 4-59 49-98 (100)
240 2wqr_A IG epsilon chain C regi 98.8 1.7E-09 5.8E-14 68.6 2.7 77 17-97 73-154 (323)
241 2bnu_A TCR alpha chain, T-cell 98.8 3E-08 1E-12 59.7 8.1 78 10-92 66-147 (203)
242 2dav_A SLOW MYBP-C, myosin-bin 98.8 1.2E-08 4.1E-13 57.5 5.9 45 15-63 74-119 (126)
243 2v5m_A Dscam; neurobiology SPL 98.8 1.9E-08 6.4E-13 64.7 7.6 77 16-97 59-143 (388)
244 1sy6_A T-cell surface glycopro 98.8 2.5E-09 8.6E-14 64.2 3.3 72 15-97 48-148 (204)
245 2w59_A IGY FCU3-4; immunoglobu 98.8 5.8E-09 2E-13 63.6 4.7 75 16-97 77-157 (231)
246 1i1c_A IGG2A, IG gamma-2A chai 98.8 3.3E-09 1.1E-13 65.2 3.6 79 15-97 81-162 (239)
247 2wqr_A IG epsilon chain C regi 98.8 4.9E-09 1.7E-13 66.4 4.2 75 16-97 178-258 (323)
248 2oz4_A Intercellular adhesion 98.8 1.3E-07 4.4E-12 58.2 10.3 69 17-94 57-130 (265)
249 3rgv_A YAE62 TCR A chain; TCR, 98.7 5.2E-09 1.8E-13 63.2 3.2 80 11-97 67-148 (200)
250 1oga_D T-cell receptor alpha c 98.7 1E-07 3.4E-12 58.0 8.8 77 10-92 66-144 (215)
251 2ak4_D SB27 T cell receptor al 98.7 6.1E-08 2.1E-12 58.7 7.6 78 10-92 71-151 (211)
252 1z9m_A GAPA225; nectin-like, I 98.7 2.9E-08 1E-12 56.5 5.8 47 12-63 99-145 (145)
253 2y25_A Myomesin; structural pr 98.7 5.4E-10 1.8E-14 70.0 -1.9 79 13-97 58-145 (317)
254 3rbg_A Cytotoxic and regulator 98.7 4.8E-08 1.6E-12 54.3 6.1 47 12-63 62-108 (124)
255 3irg_B Obscurin-like protein 1 98.7 6.5E-08 2.2E-12 52.0 6.5 48 7-58 60-107 (107)
256 3knb_A Titin; IG-like, titin, 98.7 8.6E-08 2.9E-12 51.5 6.9 46 6-55 53-98 (100)
257 2xot_A Amphoterin-induced prot 98.7 3.1E-08 1.1E-12 64.1 5.9 59 17-93 302-360 (361)
258 2eys_A NKT15; natural killer T 98.7 7.5E-08 2.6E-12 58.3 7.2 78 10-92 69-150 (210)
259 3gsn_A RA14 TCR alpha chain (T 98.7 1.1E-08 3.9E-13 61.7 3.3 80 11-97 67-148 (199)
260 2wng_A Tyrosine-protein phosph 98.7 1E-08 3.5E-13 64.9 3.1 78 17-97 181-259 (327)
261 1zox_A CLM-1; IG-superfamily, 98.7 8.9E-08 3E-12 52.2 6.5 44 10-57 68-111 (113)
262 2aty_A Complement receptor chi 98.7 6.2E-08 2.1E-12 63.0 6.8 80 15-97 232-313 (376)
263 3mtr_A N-CAM-1, NCAM-1, neural 98.7 5.3E-07 1.8E-11 53.8 10.4 63 13-83 73-135 (215)
264 1kgc_D T-cell receptor alpha c 98.7 9.7E-08 3.3E-12 57.6 6.8 78 10-92 64-146 (206)
265 4gos_A V-SET domain-containing 98.6 5E-08 1.7E-12 54.5 5.0 38 13-54 81-118 (125)
266 2nms_A CMRF35-like-molecule 1; 98.6 3.1E-07 1E-11 51.3 8.1 48 10-61 69-116 (124)
267 3q0h_A T cell immunoreceptor w 98.6 3.9E-08 1.3E-12 54.3 4.3 43 15-60 70-112 (117)
268 2kkq_A Myotilin; unknown funct 98.6 2.7E-07 9.2E-12 50.7 7.5 44 13-60 70-113 (116)
269 1lp9_E T-cell receptor alpha c 98.6 4.9E-08 1.7E-12 58.4 4.7 77 11-92 68-148 (194)
270 4ei6_A Valpha1 XV19 type II na 98.6 5.6E-08 1.9E-12 59.1 5.0 83 10-97 67-153 (208)
271 2edo_A CD48 antigen; beta-sand 98.6 4.9E-08 1.7E-12 54.2 4.2 48 14-64 71-118 (121)
272 2dm3_A KIAA0992 protein, palla 98.6 1.2E-07 4.1E-12 51.2 5.6 46 12-61 62-107 (110)
273 3qp3_A Titin; I-SET IG-like, s 98.6 3.1E-07 1E-11 49.0 7.1 47 6-56 54-100 (103)
274 1l6x_A Immunoglobulin gamma-1 98.6 4.2E-08 1.4E-12 58.6 3.9 75 19-97 71-148 (207)
275 3udw_C Poliovirus receptor; PV 98.6 1.3E-07 4.3E-12 51.4 5.5 41 15-58 78-118 (118)
276 2q86_A Valpha14 TCR; INKT cell 98.6 2.6E-08 9.1E-13 61.1 2.9 77 10-93 67-145 (229)
277 3puc_A Titin; I-SET IG-like do 98.6 3.2E-07 1.1E-11 48.5 6.8 46 6-55 52-97 (99)
278 1pko_A Myelin oligodendrocyte 98.6 3.3E-07 1.1E-11 51.6 7.2 41 13-57 82-122 (139)
279 3rrq_A Protein PD-1, programme 98.6 3.2E-07 1.1E-11 51.5 7.1 52 6-58 63-117 (129)
280 3m45_A Cell adhesion molecule 98.6 1.6E-07 5.4E-12 50.3 5.6 41 13-58 68-108 (108)
281 1eaj_A Coxsackie virus and ade 98.6 1.2E-07 4.2E-12 51.8 5.2 40 13-56 86-125 (126)
282 2edf_A Obscurin; beta-sandwich 98.5 9.7E-08 3.3E-12 51.1 4.2 48 6-61 53-100 (103)
283 1hkf_A NKP44, NK cell activati 98.5 7.9E-07 2.7E-11 49.5 8.0 49 5-54 71-121 (122)
284 2lu7_A Obscurin-like protein 1 98.5 8.5E-08 2.9E-12 50.2 3.8 45 3-55 38-82 (84)
285 2nzi_A Titin; IG-domain, FNIII 98.5 2.5E-06 8.6E-11 53.1 11.0 66 11-83 155-221 (305)
286 2e7c_A Myosin-binding protein 98.5 2.9E-07 1E-11 50.4 6.0 46 9-58 72-117 (118)
287 1hzh_H IGG, immunoglobulin hea 98.5 1E-07 3.5E-12 62.9 4.8 76 17-97 195-290 (457)
288 2dm2_A Palladin; beta-sandwich 98.5 1.3E-07 4.5E-12 51.1 4.5 45 13-61 63-107 (110)
289 2bk8_A Connectin, M1, titin he 98.5 3.3E-07 1.1E-11 48.4 6.0 46 6-55 48-93 (97)
290 1neu_A Myelin P0 protein; stru 98.5 1.5E-07 5.1E-12 51.8 4.6 44 13-58 78-121 (124)
291 2e6p_A Obscurin-like protein 1 98.5 8.9E-08 3.1E-12 51.3 3.6 44 10-61 59-102 (104)
292 2eo9_A Roundabout homolog 1; b 98.5 1.9E-07 6.4E-12 51.2 5.0 54 17-74 63-116 (118)
293 2nw2_A ELS4 TCR alpha chain; T 98.5 3.1E-07 1.1E-11 55.2 5.9 77 10-91 64-143 (200)
294 1za6_B IGG heavy chain; immuno 98.5 1E-07 3.6E-12 60.8 4.0 77 17-97 183-281 (344)
295 2eny_A Obscurin; beta-sandwich 98.5 9.1E-08 3.1E-12 51.7 3.1 47 6-60 55-101 (104)
296 1u2h_A APEG-1, aortic preferen 98.5 9.1E-07 3.1E-11 46.7 7.1 45 7-55 53-97 (99)
297 2kdg_A Myotilin; immonoglobuli 98.5 1E-06 3.4E-11 46.6 7.2 40 13-56 59-98 (100)
298 2c1o_A IGK-C protein; FAB frag 98.5 1.9E-07 6.4E-12 57.1 4.7 65 23-97 11-80 (254)
299 2edn_A Myosin-binding protein 98.5 1.9E-07 6.7E-12 52.0 4.2 39 15-57 79-117 (118)
300 4gjt_B Poliovirus receptor-rel 98.5 2.5E-07 8.4E-12 51.4 4.7 41 12-55 76-116 (123)
301 3qjh_A 5C.C7 alpha chain; immu 98.5 2.9E-06 9.7E-11 51.4 9.7 75 9-88 65-141 (205)
302 3cx2_A Myosin-binding protein 98.5 5E-07 1.7E-11 48.8 5.8 38 14-55 70-107 (108)
303 3irg_A Titin; IG-like, titin, 98.5 9E-07 3.1E-11 46.6 6.6 46 6-55 53-98 (100)
304 4acp_A IG gamma-1 chain C regi 98.5 9.5E-08 3.3E-12 58.9 3.0 77 17-97 90-169 (240)
305 1x44_A Myosin-binding protein 98.4 2.9E-07 9.8E-12 49.3 4.5 46 7-60 55-100 (103)
306 1nko_A Sialic acid binding IG- 98.4 8.3E-08 2.8E-12 53.8 2.4 54 6-61 76-132 (132)
307 1waa_A Titin; metal binding pr 98.4 2.8E-07 9.4E-12 48.9 4.3 43 5-55 49-91 (93)
308 4f9l_D 20.1 anti-BTN3A1 antibo 98.4 3.9E-07 1.3E-11 56.8 5.4 90 6-98 61-171 (259)
309 3s35_X Vascular endothelial gr 98.4 4.1E-07 1.4E-11 50.0 5.0 41 15-59 73-113 (122)
310 2q87_A CMRF35-H antigen; all-b 98.4 3.3E-07 1.1E-11 49.7 4.5 29 10-39 62-90 (110)
311 1g1c_A Immunoglobulin-like dom 98.4 1.4E-06 4.8E-11 46.0 6.9 40 12-55 58-97 (99)
312 2or7_A T-cell immunoglobulin a 98.4 2E-07 6.9E-12 51.0 3.6 40 12-55 70-109 (115)
313 3kvq_A Vascular endothelial gr 98.4 4.3E-07 1.5E-11 48.7 4.7 43 15-61 63-105 (108)
314 2oyp_A Hepatitis A virus cellu 98.4 1.3E-07 4.4E-12 50.9 2.6 40 12-55 68-107 (109)
315 2lvc_A Obscurin-like protein 1 98.4 1.7E-07 5.7E-12 49.7 2.9 34 4-38 49-82 (91)
316 2edh_A Obscurin; structural ge 98.4 8.7E-07 3E-11 48.1 5.9 47 5-59 62-108 (113)
317 1wwb_X Protein (brain derived 98.4 5E-07 1.7E-11 48.6 4.8 39 16-58 62-100 (103)
318 1gxe_A Myosin binding protein 98.4 5.4E-07 1.8E-11 51.4 5.0 46 6-55 93-138 (139)
319 2pkd_A SLAM family member 5; s 98.4 7.5E-07 2.6E-11 48.9 5.3 42 12-55 68-109 (111)
320 1igy_B IGG1 intact antibody MA 98.4 1.5E-08 5.1E-13 66.5 -1.9 78 16-97 295-375 (434)
321 3bia_X T-cell immunoglobulin a 98.4 6.1E-07 2.1E-11 49.1 4.8 47 10-58 67-113 (116)
322 4hwu_A Fibroblast growth facto 98.4 1.1E-06 3.6E-11 46.3 5.4 39 17-59 52-90 (95)
323 1nct_A Titin; cell adhesion, g 98.4 5.9E-07 2E-11 48.5 4.4 45 6-54 60-104 (106)
324 2dku_A KIAA1556 protein; beta- 98.4 8.1E-07 2.8E-11 47.4 4.8 48 6-61 53-100 (103)
325 2d9c_A Signal-regulatory prote 98.3 6.2E-07 2.1E-11 50.4 4.4 49 14-63 77-128 (136)
326 1wit_A Twitchin 18TH IGSF modu 98.3 1.7E-06 5.8E-11 45.3 5.9 38 13-54 55-92 (93)
327 1ymm_D T cell receptor alpha c 98.3 5.4E-08 1.8E-12 58.8 -0.0 77 11-92 67-146 (207)
328 2yuv_A Myosin-binding protein 98.3 7.9E-07 2.7E-11 47.3 4.6 45 6-58 53-97 (100)
329 2ptt_A CD48 antigen; CD244, CD 98.3 5.4E-07 1.8E-11 48.8 4.0 38 14-56 71-108 (110)
330 2jll_A NCAM2, neural cell adhe 98.3 9.1E-06 3.1E-10 52.2 10.3 65 12-83 154-218 (389)
331 2or8_A Hepatitis A virus cellu 98.3 5.9E-07 2E-11 48.9 4.2 42 12-55 69-110 (116)
332 1fhg_A Telokin; immunoglobulin 98.3 2.6E-06 8.9E-11 48.8 7.0 44 13-60 95-138 (154)
333 2cpc_A KIAA0657 protein; immun 98.3 7.9E-07 2.7E-11 48.2 4.5 45 7-59 59-103 (113)
334 1zvo_C Myeloma immunoglobulin 98.3 3.8E-06 1.3E-10 56.6 8.2 75 17-97 362-440 (512)
335 1u9k_A Triggering receptor exp 98.3 1.7E-06 5.7E-11 47.3 5.4 29 10-39 70-98 (114)
336 1he7_A High affinity nerve gro 98.3 1.5E-06 5.2E-11 48.9 5.2 42 15-60 62-103 (126)
337 2qsq_A Carcinoembryonic antige 98.3 3.8E-06 1.3E-10 46.1 6.4 38 16-56 72-109 (111)
338 3r0n_A Poliovirus receptor-rel 98.3 1.8E-06 6E-11 47.8 5.0 36 15-53 92-127 (128)
339 3u6r_L Antibody 1:7 (light cha 98.3 9.1E-07 3.1E-11 50.7 3.7 48 6-57 60-107 (143)
340 1wwc_A Protein (NT-3 growth fa 98.2 4.1E-06 1.4E-10 45.7 6.2 41 14-58 63-103 (118)
341 2jjs_C Leukocyte surface antig 98.2 1.1E-06 3.9E-11 49.4 4.0 46 12-61 74-120 (127)
342 2cr3_A Basic fibroblast growth 98.2 2.4E-06 8.2E-11 45.4 5.1 38 17-58 55-92 (99)
343 3bik_B Programmed cell death p 98.2 9.1E-06 3.1E-10 45.8 7.7 47 10-57 77-124 (134)
344 2pnd_A V-SET and immunoglobuli 98.2 2.9E-06 9.9E-11 46.7 5.5 43 12-55 74-118 (119)
345 2dm7_A KIAA1556 protein; beta- 98.2 2.1E-06 7.2E-11 46.1 4.8 46 5-58 51-96 (108)
346 1ncn_A T lymphocyte activation 98.2 3.1E-06 1E-10 45.7 5.2 25 15-40 68-92 (110)
347 3kg5_A B-cell antigen receptor 98.2 5.1E-06 1.7E-10 47.0 6.2 55 6-61 70-124 (134)
348 1gl4_B Basement membrane-speci 98.2 3.2E-06 1.1E-10 44.6 5.1 34 17-54 63-96 (98)
349 2edk_A Myosin-binding protein 98.2 7.2E-07 2.4E-11 47.6 2.4 44 6-57 57-100 (101)
350 2dlt_A Myosin binding protein 98.2 6.9E-07 2.4E-11 48.0 2.3 44 6-55 53-96 (106)
351 3caf_A Fibroblast growth facto 98.2 4.6E-06 1.6E-10 44.0 5.5 35 16-54 65-99 (100)
352 2edj_A Roundabout homolog 2; K 98.2 1.6E-06 5.4E-11 45.9 3.7 37 17-57 63-99 (100)
353 2r15_A Myomesin-1; sarcomeric 98.2 6.4E-06 2.2E-10 48.6 6.6 40 13-56 171-210 (212)
354 2x1w_L Vascular endothelial gr 98.2 4.9E-06 1.7E-10 49.7 6.0 40 15-58 170-209 (213)
355 3mj6_A Junctional adhesion mol 98.2 3.3E-06 1.1E-10 51.7 5.3 42 13-58 198-239 (268)
356 3bp6_A Programmed cell death p 98.2 1.2E-05 4.1E-10 44.1 7.0 45 10-55 67-112 (117)
357 1jhl_L IGG1-kappa D11.15 FV (l 98.2 2.8E-06 9.6E-11 45.8 4.4 33 6-39 61-93 (108)
358 2ckn_A Basic fibroblast growth 98.2 6.4E-06 2.2E-10 43.3 5.6 35 16-54 60-94 (95)
359 3khq_A B-cell antigen receptor 98.2 1.5E-06 5.2E-11 49.0 3.3 52 6-58 67-119 (133)
360 2e7b_A Obscurin; IG-like domai 98.2 2.3E-06 8E-11 45.6 3.9 48 4-59 51-98 (103)
361 1oaq_L Light chain; antibody, 98.2 4E-06 1.4E-10 46.2 4.8 48 6-56 63-110 (120)
362 1qfo_A Protein (sialoadhesin); 98.1 1.7E-06 5.7E-11 47.5 3.2 33 6-39 67-101 (119)
363 1mqk_H Antibody 7E2 FV fragmen 98.1 9.3E-06 3.2E-10 45.2 6.3 28 11-39 74-101 (127)
364 2ny1_B T-cell surface glycopro 98.1 9.2E-06 3.2E-10 47.2 6.5 42 15-60 142-183 (184)
365 1pew_A JTO2, A lambda-6 type i 98.1 6.3E-06 2.1E-10 44.6 5.4 33 6-39 60-94 (109)
366 2yr3_A Myosin light chain kina 98.1 3.1E-06 1.1E-10 44.7 4.0 38 13-54 61-98 (99)
367 2qhl_A Novel immune-type recep 98.1 7.3E-06 2.5E-10 44.5 5.6 34 5-39 65-98 (111)
368 1jtp_A Single-domain antibody; 98.1 1.6E-05 5.6E-10 45.5 7.2 27 11-38 74-100 (148)
369 2k1m_A Myosin-binding protein 98.1 3.3E-06 1.1E-10 44.5 3.9 29 7-36 54-82 (95)
370 2eo1_A OBSCN protein, cDNA FLJ 98.1 4.4E-06 1.5E-10 44.4 4.4 45 6-58 56-100 (102)
371 1mfa_H IGG1-lambda Se155-4 FAB 98.1 1E-05 3.5E-10 44.5 6.0 29 10-39 73-101 (120)
372 1smo_A Triggering receptor exp 98.1 7.9E-06 2.7E-10 45.2 5.5 29 10-39 70-98 (119)
373 3ojm_B Fibroblast growth facto 98.1 9.8E-06 3.4E-10 48.3 6.3 44 15-62 184-227 (231)
374 1xt5_A Variable region-contain 98.1 6.2E-06 2.1E-10 45.8 5.1 41 14-55 90-132 (135)
375 1p6f_A NKP46, natural cytotoxi 98.1 4.2E-06 1.4E-10 51.4 4.6 69 13-82 149-217 (242)
376 1mqk_L Antibody 7E2 FV fragmen 98.1 3.5E-06 1.2E-10 46.5 3.8 48 6-55 61-108 (120)
377 3grw_A Fibroblast growth facto 98.1 6.7E-06 2.3E-10 49.5 5.3 44 14-61 180-223 (241)
378 1xed_A Polymeric-immunoglobuli 98.1 1.2E-05 4.2E-10 44.2 5.9 29 10-39 69-97 (117)
379 1dlf_H Anti-dansyl immunoglobu 98.1 1.4E-05 4.9E-10 44.2 6.2 29 10-39 75-103 (124)
380 2e6q_A Obscurin-like protein 1 98.1 1.7E-05 5.9E-10 43.6 6.4 47 6-59 62-108 (112)
381 2a38_A Titin; Z1Z2, structural 98.1 1.2E-05 3.9E-10 46.9 6.0 43 8-54 151-193 (194)
382 1mq8_A ICAM-1, intercellular a 98.1 1.8E-06 6.3E-11 54.8 2.7 78 16-96 142-227 (291)
383 2ywz_A NEW antigen receptor va 98.1 9.3E-06 3.2E-10 44.1 5.2 28 10-38 60-87 (111)
384 3t0v_A Immunoglobulin variable 98.1 1.2E-05 4.2E-10 44.7 5.7 33 6-39 62-94 (123)
385 3so5_A LIG-3, leucine-rich rep 98.1 1E-05 3.5E-10 43.1 5.2 36 15-54 75-111 (112)
386 2q20_A VK1 O18/O8 germline lig 98.1 5.3E-06 1.8E-10 44.9 4.0 33 6-39 63-95 (109)
387 2h32_A Immunoglobulin IOTA cha 98.0 2.4E-06 8E-11 47.7 2.6 28 11-39 74-101 (126)
388 4ffy_L DENV1-E111 single chain 98.0 5.9E-06 2E-10 45.9 4.2 47 6-55 65-111 (126)
389 3sgj_C Human FCG3A receptor; r 98.0 5.1E-06 1.7E-10 49.6 4.2 45 16-63 137-181 (204)
390 2coq_A NEW antigen receptor va 98.0 1.1E-05 3.8E-10 43.5 5.2 28 10-38 60-87 (108)
391 1qfw_M FV, antibody (anti beta 98.0 2.6E-06 9E-11 46.0 2.6 33 6-39 61-93 (108)
392 2yc1_A Single chain antibody f 98.0 1.1E-05 3.8E-10 44.1 5.1 28 10-38 73-100 (117)
393 1tvd_A T cell receptor, ES204 98.0 6.7E-06 2.3E-10 44.9 4.1 27 11-38 71-97 (116)
394 1eeq_A Kappa-4 immunoglobulin 98.0 7.5E-06 2.6E-10 44.6 4.2 33 6-39 67-99 (114)
395 1kxv_C Camelid VHH domain CAB1 98.0 1.1E-05 3.6E-10 44.5 4.8 28 11-39 73-100 (121)
396 1j05_L T84.66 antibody, anti-C 98.0 3.1E-06 1.1E-10 45.9 2.5 33 6-39 65-97 (111)
397 2j8h_A Titin, connectin; cardi 98.0 1.7E-05 5.8E-10 46.3 5.8 41 11-55 155-196 (197)
398 1h5b_A Murine T cell receptor 98.0 7.7E-06 2.6E-10 44.4 4.0 27 12-39 67-93 (113)
399 2atp_B T-cell surface glycopro 98.0 1.9E-05 6.4E-10 43.0 5.5 32 6-38 67-100 (115)
400 2wv3_A Neuroplastin; igcam, me 98.0 2.9E-05 9.8E-10 45.2 6.7 41 11-55 148-189 (190)
401 2otu_A FV light chain variable 98.0 6.6E-06 2.2E-10 44.9 3.6 33 6-39 66-98 (115)
402 2e27_L Anti-ciguatoxin antibod 98.0 3.6E-06 1.2E-10 46.5 2.5 33 6-39 63-95 (119)
403 3knb_A Titin; IG-like, titin, 98.0 5E-06 1.7E-10 44.5 2.9 30 67-97 13-42 (100)
404 1yc7_A Anti-VSG immunoglobulin 98.0 1.6E-05 5.5E-10 44.2 5.1 29 10-39 72-100 (124)
405 2va4_A NCAM2, N-CAM 2, neural 98.0 2.1E-05 7.3E-10 45.6 5.8 38 13-54 154-191 (192)
406 1i8k_A Epidermal growth factor 98.0 5.8E-06 2E-10 44.6 3.1 33 6-39 61-93 (107)
407 2yc1_B Single chain antibody f 98.0 8.6E-06 2.9E-10 46.7 3.9 48 6-56 76-123 (146)
408 2hp4_A T-cell surface glycopro 98.0 7.7E-06 2.6E-10 44.7 3.6 33 6-39 67-99 (114)
409 2frg_P TREM-like transcript-1; 98.0 3E-05 1E-09 42.0 5.9 27 12-39 64-90 (106)
410 2xt1_B Camelid VHH 9; viral pr 98.0 1.4E-05 4.7E-10 44.2 4.6 27 10-37 75-101 (121)
411 3jz7_A MCAR, CAR, coxsackievir 98.0 1.2E-05 4E-10 47.3 4.5 36 16-55 176-211 (214)
412 3oai_A Maltose-binding peripla 98.0 1.2E-05 4E-10 53.7 4.9 42 12-55 463-504 (507)
413 3bdb_A Novel immune-type recep 97.9 2.5E-05 8.5E-10 44.1 5.6 48 5-55 65-112 (137)
414 3bj9_1 Immunoglobulin IOTA cha 97.9 3.1E-05 1.1E-09 42.1 5.9 26 13-39 74-99 (116)
415 3b5h_A Cervical EMMPRIN, HAB18 97.9 2.8E-05 9.5E-10 45.0 6.0 40 12-55 142-182 (184)
416 3rbs_A Myomesin-1; immunoglobu 97.9 1.4E-05 4.9E-10 47.8 4.9 38 12-53 167-204 (207)
417 3cx5_J Heavy chain (VH) of FV- 97.9 1.4E-05 4.8E-10 44.5 4.5 28 10-38 73-100 (127)
418 1a2y_B IGG1-kappa D1.3 FV (hea 97.9 1.1E-05 3.8E-10 44.1 4.0 27 11-38 73-99 (116)
419 1sjv_A R9; camelids antibody, 97.9 1.6E-05 5.3E-10 43.3 4.5 27 11-38 73-99 (114)
420 2p1y_A Bispecific alpha/beta T 97.9 3.9E-05 1.3E-09 46.2 6.7 28 11-39 194-221 (238)
421 1q8m_A Triggering receptor exp 97.9 4.5E-05 1.5E-09 42.8 6.4 30 9-39 74-103 (127)
422 1n4x_H Immunoglobulin heavy ch 97.9 1.2E-05 4.2E-10 44.1 4.1 28 11-39 74-101 (120)
423 1zvh_A Immunoglobulin heavy ch 97.9 2.2E-05 7.4E-10 44.2 5.2 29 10-39 73-101 (134)
424 1ntl_A CRRY-IG; immunology, co 97.9 3.6E-05 1.2E-09 52.4 7.1 77 17-97 409-488 (551)
425 3moq_A NEW antigen receptor va 97.9 2.2E-05 7.6E-10 43.9 5.2 30 9-39 59-88 (126)
426 1xiw_D Immunoglobulin heavy ch 97.9 1.7E-05 5.7E-10 43.8 4.6 27 11-38 74-100 (122)
427 2wzp_D Camelid VHH5; baseplate 97.9 1.3E-05 4.6E-10 44.2 4.2 28 11-39 74-101 (123)
428 3b9v_A Heavy chain variable do 97.9 1.4E-05 4.7E-10 43.9 4.2 28 11-39 74-101 (120)
429 3shs_A HOC head outer capsid p 97.9 9.9E-05 3.4E-09 46.8 8.4 78 15-97 51-137 (304)
430 1dlf_L Anti-dansyl immunoglobu 97.9 7.9E-06 2.7E-10 44.4 3.1 33 6-39 66-98 (113)
431 1fo0_A Protein (BM3.3 T cell r 97.9 1.1E-05 3.8E-10 44.1 3.7 32 6-38 62-95 (116)
432 1f2q_A High affinity immunoglo 97.9 2.3E-05 7.9E-10 45.3 5.3 43 14-59 132-174 (176)
433 1j05_H T84.66 antibody, anti-C 97.9 1.3E-05 4.4E-10 44.1 3.9 28 11-39 74-101 (121)
434 2d7t_H Anti polyhydroxybutyrat 97.9 2.1E-05 7E-10 44.6 4.9 43 11-56 74-116 (139)
435 2yd6_A PTPRD protein; hydrolas 97.9 2.8E-05 9.5E-10 46.2 5.6 43 13-58 164-206 (212)
436 2jju_A Signal regulatory prote 97.9 1.9E-05 6.5E-10 43.8 4.6 26 13-39 71-96 (127)
437 3osk_A Cytotoxic T-lymphocyte 97.9 2.5E-05 8.6E-10 43.6 5.0 31 7-38 68-98 (130)
438 2ghw_B Anti-SARS SCFV antibody 97.9 2.9E-05 9.8E-10 47.1 5.5 47 6-55 195-241 (247)
439 1sq2_N Novel antigen receptor; 97.9 2E-05 6.8E-10 43.0 4.4 28 10-38 60-87 (113)
440 3uto_A Twitchin; kinase, muscl 97.9 3.6E-05 1.2E-09 52.9 6.5 48 3-54 525-572 (573)
441 3uzq_A Anti-dengue MAB 4E11; d 97.9 1.4E-05 4.8E-10 48.8 4.1 49 6-57 197-245 (253)
442 1olz_A Semaphorin 4D; developm 97.9 1.6E-05 5.4E-10 55.6 4.8 68 15-84 585-654 (663)
443 1kxt_B Immunoglobulin VHH frag 97.9 2.5E-05 8.5E-10 43.5 4.8 28 10-38 72-99 (127)
444 2v5t_A NCAM2, N-CAM 2, neural 97.9 8.5E-05 2.9E-09 42.9 7.2 36 16-55 152-187 (189)
445 4f9p_D 103.2 anti-BTN3A1 antib 97.9 0.00024 8.2E-09 44.2 9.4 89 5-98 68-175 (254)
446 1i3g_L Antibody FV fragment; a 97.9 9.9E-06 3.4E-10 43.9 3.0 33 6-39 64-96 (111)
447 3lcy_A Titin; A-BAND, IG tande 97.9 5.9E-05 2E-09 43.7 6.5 46 6-55 149-195 (197)
448 1dqt_A CTLA4, cytotoxic T lymp 97.9 1.4E-05 4.9E-10 43.7 3.6 30 8-38 67-96 (117)
449 2ens_A Advanced glycosylation 97.9 1.3E-05 4.4E-10 42.1 3.3 39 15-55 56-94 (96)
450 1i3u_A Antibody VHH LAMA domai 97.9 1.9E-05 6.3E-10 43.9 4.0 28 11-39 79-106 (127)
451 3nn8_A Engineered SCFV, heavy 97.9 3.4E-05 1.2E-09 42.6 5.0 28 10-38 74-101 (122)
452 1p4b_L Antibody variable light 97.9 2.9E-05 1E-09 43.8 4.8 33 6-39 68-100 (135)
453 2x1q_A Gelsolin nanobody; cont 97.9 2.1E-05 7.3E-10 43.7 4.2 28 11-39 74-101 (127)
454 2p45_B Antibody CAB-RN05; seMe 97.9 2.3E-05 8E-10 43.2 4.3 32 6-38 69-102 (123)
455 3fku_X Neutralizing antibody F 97.8 2.1E-05 7.1E-10 49.0 4.5 49 6-55 201-249 (280)
456 1pd6_A Cardiac MYBP-C;, myosin 97.8 1.8E-05 6.1E-10 42.6 3.6 30 7-37 63-92 (104)
457 3k1k_C Enhancer; nanobody, ant 97.8 3.6E-05 1.2E-09 42.7 4.9 29 9-38 74-102 (123)
458 2i24_N NEW antigen receptor PB 97.8 4.4E-05 1.5E-09 42.3 5.2 29 9-38 59-87 (121)
459 2z35_A T-cell receptor alpha-c 97.8 1.4E-05 4.9E-10 43.3 2.9 27 10-37 66-92 (112)
460 3k74_B Nanobody; immunoglobuli 97.8 3.6E-05 1.2E-09 42.0 4.6 29 9-38 70-98 (115)
461 3gkz_A Anti-methamphetamine si 97.8 2.6E-05 8.8E-10 47.7 4.4 47 6-55 202-248 (257)
462 3lh2_H FV 4E10 heavy chain; ep 97.8 5.4E-05 1.8E-09 43.0 5.4 29 10-39 75-103 (137)
463 2ifg_A High affinity nerve gro 97.8 3.4E-05 1.2E-09 49.3 5.0 39 15-57 308-346 (347)
464 2ol3_A BM3.3 T-cell receptor a 97.8 3.6E-05 1.2E-09 43.8 4.6 32 6-38 62-95 (142)
465 2oi9_C V beta, T cell receptor 97.8 3.5E-05 1.2E-09 42.6 4.3 33 6-39 63-96 (121)
466 1rjc_A 1D2L19, camelid heavy c 97.8 4.1E-05 1.4E-09 43.3 4.7 28 10-38 73-100 (137)
467 3bfo_A Mucosa-associated lymph 97.8 4.7E-05 1.6E-09 39.5 4.5 37 15-54 49-85 (91)
468 3knb_B Obscurin-like protein 1 97.8 2.6E-05 8.7E-10 42.2 3.5 30 67-97 21-50 (107)
469 3umt_A SCFV heavy chain and li 97.8 2.6E-05 8.8E-10 47.7 3.9 48 6-56 198-245 (256)
470 2vyr_E Human single domain ant 97.8 5E-05 1.7E-09 43.8 4.9 29 9-38 72-100 (153)
471 3zyj_A Leucine-rich repeat-con 97.8 3.2E-05 1.1E-09 51.1 4.6 40 17-60 398-437 (440)
472 2cr6_A KIAA1556 protein, obscu 97.8 1E-05 3.5E-10 44.0 1.9 39 13-59 67-105 (115)
473 3iy0_H FAB 14, heavy domain; c 97.7 5.9E-05 2E-09 41.5 4.8 28 10-38 73-100 (120)
474 1u3h_A T-cell receptor alpha-c 96.9 3.9E-06 1.3E-10 45.5 0.0 27 12-39 67-93 (110)
475 4hwn_A FC receptor-like A; FCR 97.7 3.2E-05 1.1E-09 41.9 3.6 40 15-55 59-98 (108)
476 1gl4_B Basement membrane-speci 97.7 3E-05 1E-09 40.7 3.4 31 67-97 18-48 (98)
477 2fbo_J V1V2;, variable region- 97.7 3.8E-05 1.3E-09 46.3 4.3 36 16-52 213-248 (250)
478 3cx2_A Myosin-binding protein 97.7 5.6E-05 1.9E-09 40.6 4.5 31 66-97 11-44 (108)
479 1zvy_A Immunoglobulin heavy ch 97.7 3.7E-05 1.3E-09 43.4 3.8 28 10-38 73-100 (136)
480 3dmm_D T-cell surface glycopro 97.7 0.00011 3.9E-09 42.1 5.9 43 10-55 76-118 (150)
481 3tpk_A Immunoglobulin heavy ch 97.7 6.9E-05 2.4E-09 42.3 4.8 29 9-38 76-104 (136)
482 2iep_A Muscle-specific kinase 97.7 5.4E-05 1.9E-09 43.9 4.5 38 17-58 154-192 (192)
483 1f3r_B FV antibody fragment; I 97.7 2.4E-05 8.3E-10 48.0 3.1 27 12-39 205-231 (257)
484 1wit_A Twitchin 18TH IGSF modu 97.7 4.7E-05 1.6E-09 39.6 3.8 30 67-97 10-39 (93)
485 3r4d_A CEA-related cell adhesi 97.7 5.1E-05 1.8E-09 44.6 4.4 41 16-59 163-203 (208)
486 1fo0_B Protein (BM3.3 T cell r 97.7 2.4E-05 8.1E-10 42.5 2.7 32 5-38 64-95 (112)
487 1nqb_A Single-chain antibody f 97.7 4.5E-05 1.6E-09 46.8 4.2 42 12-56 192-233 (256)
488 1xau_A B- and T-lymphocyte att 97.7 0.0001 3.6E-09 40.5 5.0 38 14-54 77-114 (122)
489 2yd1_A Tyrosine-protein phosph 97.7 0.00011 3.7E-09 43.5 5.6 40 17-60 164-204 (212)
490 2v9r_A Roundabout homolog 1; p 97.7 0.0001 3.5E-09 43.3 5.5 39 17-59 166-205 (212)
491 2yz1_A Tyrosine-protein phosph 97.7 3.2E-05 1.1E-09 42.3 2.9 26 13-39 75-100 (120)
492 3s97_C Contactin-1; carbonic a 97.7 0.00016 5.4E-09 42.0 6.0 36 16-55 165-200 (201)
493 3juy_B 3B3 single chain varian 97.7 5.5E-05 1.9E-09 46.2 4.2 33 6-39 210-242 (256)
494 3r8b_B G5-8, enterotoxin type 97.7 0.00021 7E-09 39.6 6.2 26 13-39 76-101 (125)
495 3ux9_B SCFV antibody; five hel 97.7 8.9E-05 3E-09 45.2 5.1 29 10-39 207-235 (256)
496 2edj_A Roundabout homolog 2; K 97.6 8.2E-05 2.8E-09 39.1 4.3 38 59-97 7-45 (100)
497 3kvq_A Vascular endothelial gr 97.6 3.9E-05 1.3E-09 40.9 3.0 30 67-97 18-47 (108)
498 1oll_A NK receptor; immune sys 97.6 5.1E-05 1.7E-09 44.4 3.7 26 13-39 146-171 (188)
499 3k81_A Single strand antibody 97.6 6.4E-05 2.2E-09 42.1 3.9 29 9-38 71-99 (127)
500 1qok_A MFE-23 recombinant anti 97.6 5.9E-05 2E-09 46.9 4.1 48 7-57 222-269 (282)
No 1
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.59 E-value=2.4e-15 Score=90.91 Aligned_cols=82 Identities=15% Similarity=0.390 Sum_probs=63.2
Q ss_pred EEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCC
Q psy5866 8 DYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGS 87 (98)
Q Consensus 8 ~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~ 87 (98)
+.....+.++|.|.+++.+ |+|.|+|.+.+. ....+..+.|.|..||.. ... .....+.+|+.+.|.|.+. |.
T Consensus 61 ~~~~~~~~~~L~I~~v~~~-D~G~Y~C~a~n~---~g~~~~~~~l~V~~p~~~-~~~-~~~~~v~~g~~~~l~C~~~-G~ 133 (203)
T 4fa8_A 61 DIHRSANTFFLVVTAANIS-HDGNYLCRMKLG---ETEVTKQEHLSVVKPLTL-SVH-SERSQFPDFSVLTVTCTVN-AF 133 (203)
T ss_dssp EEEEETTEEEEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEEEEEEE-EEE-EEECCSSCSCCEEEEEEEE-EE
T ss_pred EEEEcCCEEEEEEccCCHH-HCeEEEEEEEcC---CCcEEEEEEEEecCCcee-eec-ceeEEEcCCCEEEEEEEcC-CC
Confidence 3444567889999999999 999999999984 566666778888644322 112 2346788999999999995 79
Q ss_pred CCCeEEEEe
Q psy5866 88 PDPQISVTL 96 (98)
Q Consensus 88 p~~~~~W~~ 96 (98)
|.|.+.|++
T Consensus 134 P~P~v~W~~ 142 (203)
T 4fa8_A 134 PHPHVQWLM 142 (203)
T ss_dssp SCCEEEECC
T ss_pred CCCEEEEEE
Confidence 999999975
No 2
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.58 E-value=8.4e-15 Score=87.85 Aligned_cols=91 Identities=14% Similarity=0.178 Sum_probs=66.2
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeC-CCCceecCCCcEEEEEEcC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISP-GANPVATEGRAIELVCSTS 84 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~-~~~~~~~~g~~~~l~C~~~ 84 (98)
|+......+.++|+|.+++.+ |+|.|+|.+.+.............+.|...+.+|.+.. .....+.+|+.+.|.|.+.
T Consensus 61 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~ 139 (213)
T 3nl4_L 61 RFKGSGSGTDFTLTISDLECA-DAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVAN 139 (213)
T ss_dssp TEEEEEETTEEEEEECSCCGG-GCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEE
T ss_pred cEEEecCCCEEEEEECCCChH-HCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEe
Confidence 444444567789999999999 99999999988532111344456777766566666521 2344567899999999997
Q ss_pred CCCCCCeEEEEec
Q psy5866 85 GGSPDPQISVTLQ 97 (98)
Q Consensus 85 ~~~p~~~~~W~~~ 97 (98)
++.|.+.+.|+++
T Consensus 140 g~~P~~~v~W~k~ 152 (213)
T 3nl4_L 140 KYFPDVTVTWEVD 152 (213)
T ss_dssp EEBSCCEEEEEET
T ss_pred cccCCcEEEEEeC
Confidence 5588999999975
No 3
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.57 E-value=2.9e-14 Score=85.00 Aligned_cols=78 Identities=23% Similarity=0.405 Sum_probs=64.7
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQI 92 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 92 (98)
.+..+|+|.+++.+ |+|.|+|.+.+. ....+..+.|.|..+|..+.+.. ...+.+|+.+.|.|.+..+.|.+.+
T Consensus 81 ~~~~~L~i~~v~~~-D~G~Y~C~~~~~---~~~~~~~~~l~V~~~p~~~~~~~--~~~~~~g~~v~l~C~~~~g~p~~~v 154 (214)
T 3jz7_A 81 SGDASINVTNLQLS-DIGTYQCKVKKA---PGVANKKFLLTVLVKPSGTRCFV--DGSEEIGNDFKLKCEPKEGSLPLQF 154 (214)
T ss_dssp GTBCCEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEECCCBSCEEEE--ESCCBTTCCEEEEEECSBCCSSCEE
T ss_pred CCcccEEEccCChh-hCeEEEEEEEeC---CCccccEEEEEEEcCCCCceeee--ecceecCCcEEEEecCCCCCCCCEE
Confidence 35678999999999 999999999985 45567778899988887766532 2347889999999998668999999
Q ss_pred EEEe
Q psy5866 93 SVTL 96 (98)
Q Consensus 93 ~W~~ 96 (98)
.|++
T Consensus 155 ~W~~ 158 (214)
T 3jz7_A 155 EWQK 158 (214)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9998
No 4
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.54 E-value=2.6e-14 Score=85.27 Aligned_cols=78 Identities=17% Similarity=0.320 Sum_probs=57.5
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCC-cEEEEEEcCCCCCCCeEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGR-AIELVCSTSGGSPDPQIS 93 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~-~~~l~C~~~~~~p~~~~~ 93 (98)
+.+|+|.+++.+ |+|.|+|.+.+.. ......+.|.|+.++..|.+.... .....|. .+.|.|.+.++.|.|.+.
T Consensus 69 ~~sL~I~~v~~~-D~G~Y~C~~~~~~---~~~~~~~~L~V~~~~~~p~i~~~~-~~~~~g~~~v~L~C~~~g~~p~p~i~ 143 (193)
T 2if7_A 69 SYSLQLSNLKME-DTGSYRAQISTKT---SAKLSSYTLRILRQLRNIQVTNHS-QLFQNMTCELHLTCSVEDADDNVSFR 143 (193)
T ss_dssp TCCEEECSCCGG-GCEEEEEEEECSS---CEEEEEEEEEEECCCEEEEEEECC-C---CSSEEEEEEEEEESCCTTCEEE
T ss_pred CeEEEECCCCcc-cCceEEEEEEecC---CCeEEEEEEEEEccCCCCeEecCc-eeecCCCceEEEEEEEecCCCceEEE
Confidence 467999999999 9999999999852 233446788888777667664322 2234455 799999997556789999
Q ss_pred EEec
Q psy5866 94 VTLQ 97 (98)
Q Consensus 94 W~~~ 97 (98)
|+++
T Consensus 144 W~~~ 147 (193)
T 2if7_A 144 WEAL 147 (193)
T ss_dssp EEET
T ss_pred EEeC
Confidence 9975
No 5
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.54 E-value=8.6e-14 Score=83.68 Aligned_cols=78 Identities=18% Similarity=0.283 Sum_probs=63.2
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCC--Ce
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPD--PQ 91 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~--~~ 91 (98)
+...|+|.+++.+ |+|.|+|.+.+. ....+..+.|.|..+|..+.+... ..+.+|+.+.|+|.+.++.|. ++
T Consensus 52 ~~~~L~I~~v~~~-D~G~Y~C~a~n~---~~~~~~~~~l~V~~~p~~~~~~~~--~~~~~G~~~~L~C~~~~~~p~~~~~ 125 (202)
T 1vca_A 52 TTSTLTMNPVSFG-NEHSYLCTATCE---SRKLEKGIQVEIYSFPKDPEIHLS--GPLEAGKPITVKCSVADVYPFDRLE 125 (202)
T ss_dssp TEEEEEESSCCGG-GCSEEEEEEEET---TEEEEEEEEEEEEBCCSCCEEEES--SCEETTSCEEEEEEEEEEBSGGGEE
T ss_pred CccEEEECcCCHH-HCEEEEEEEEEC---CceEeeEEEEEEEeCCCCCEeCCc--eEEcCCCCEEEEEEECCcCCCCCeE
Confidence 4567999999999 999999999985 345566788999888877777542 678899999999999755554 47
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|+++
T Consensus 126 i~W~k~ 131 (202)
T 1vca_A 126 IDLLKG 131 (202)
T ss_dssp EEEEET
T ss_pred EEEEeC
Confidence 899975
No 6
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.54 E-value=6e-14 Score=83.54 Aligned_cols=80 Identities=25% Similarity=0.356 Sum_probs=60.2
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCee--eEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCe
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDL--HSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQ 91 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~--~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 91 (98)
++.+|+|.+++.+ |+|.|+|.+.+..+.... ....+.|.|..++..|.+.. .....|+.+.|.|.+..|.|.|.
T Consensus 63 ~~~~L~I~~v~~~-D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~---~~~~~g~~~~l~C~~~~g~P~p~ 138 (201)
T 1dr9_A 63 NNLSIVILALRPS-DEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISD---FEIPTSNIRRIICSTSGGFPEPH 138 (201)
T ss_dssp TTTEEEECSCCGG-GCEEEEEEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEE---EECSSTTEEEEEEEEEEESSCEE
T ss_pred CCcEEEEecccch-hCeEEEEEEEcCCCCccccccccEEEEEEcCCCCCCceEe---ccCCCCCeEEEEEecCCccCCCE
Confidence 4568999999999 999999999996432222 24567888877666666532 12245888999999866899999
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|+++
T Consensus 139 i~W~k~ 144 (201)
T 1dr9_A 139 LSWLEN 144 (201)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 999975
No 7
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.53 E-value=4.2e-14 Score=84.74 Aligned_cols=82 Identities=23% Similarity=0.302 Sum_probs=61.2
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCe-eeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCC---CC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQD-LHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGG---SP 88 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~-~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~---~p 88 (98)
.++++|+|.+++.+ |+|.|+|.+.+...... .....+.|.|..++..|.+.. + ..+.+|+.+.|.|.+.+. .|
T Consensus 79 ~~~~sL~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~-~~~~~G~~v~L~C~~~~~~~~~p 155 (214)
T 2zg1_A 79 KKNCSLSIGDARME-DTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-L-EPLESGRPTRLSCSLPGSCEAGP 155 (214)
T ss_dssp GTBCCEEECSCCGG-GCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC----CCCCTTCCEEEEEECTTCCSCSS
T ss_pred CCeEEEEEccCCHh-hCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-C-ccccCCCeEEEEEEeccCCCCCC
Confidence 45678999999999 99999999998521111 112467888888777787743 2 246799999999998643 47
Q ss_pred CCeEEEEec
Q psy5866 89 DPQISVTLQ 97 (98)
Q Consensus 89 ~~~~~W~~~ 97 (98)
.|.+.|+++
T Consensus 156 ~p~v~W~~~ 164 (214)
T 2zg1_A 156 PLTFSWTGN 164 (214)
T ss_dssp CCEEEEESS
T ss_pred CceEEEeCC
Confidence 899999975
No 8
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.52 E-value=6.4e-14 Score=83.98 Aligned_cols=91 Identities=19% Similarity=0.217 Sum_probs=64.2
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC-CCCEEe-CCCCceecCCCcEEEEEEc
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP-QPPKIS-PGANPVATEGRAIELVCST 83 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~-~~p~i~-~~~~~~~~~g~~~~l~C~~ 83 (98)
|+......+.++|+|.+++.+ |+|.|+|.+.+..+........+.|.|...+ .+|.+. ......+.+|+.+.|.|.+
T Consensus 60 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~ 138 (213)
T 3mj8_L 60 HFSGSNSGNMATLTISKAQAG-DEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMI 138 (213)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEE
T ss_pred cEEEEecCCEEEEEECCCChh-hCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEe
Confidence 444434567788999999999 9999999999863311345556788887443 455552 1234456689999999999
Q ss_pred CCCCCC-CeEEEEec
Q psy5866 84 SGGSPD-PQISVTLQ 97 (98)
Q Consensus 84 ~~~~p~-~~~~W~~~ 97 (98)
.+..|+ +.+.|+++
T Consensus 139 ~g~~p~~~~v~W~k~ 153 (213)
T 3mj8_L 139 NGFYPADVAVTWEAD 153 (213)
T ss_dssp EEEBSSCCEEEEEET
T ss_pred eceeCCCeEEEEEcC
Confidence 754454 49999975
No 9
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.52 E-value=1.7e-13 Score=82.46 Aligned_cols=78 Identities=22% Similarity=0.298 Sum_probs=61.5
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCe
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQ 91 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 91 (98)
..+..+|+|.+++.+ |+|.|+|.+.+ .......+.|.|..++..+.+.. ...+.+|+.+.|.|.+. |.|.|.
T Consensus 76 ~~~~~~L~I~~v~~~-D~G~Y~C~~~~----~~~~~~~~~l~V~~~~~~~~~~~--~~~~~~g~~v~L~C~~~-g~P~p~ 147 (222)
T 3sbw_C 76 SLGNAALQITDVKLQ-DAGVYRCMISY----GGADYKRITVKVNAPYNKINQRI--LVVDPVTSEHELTCQAE-GYPKAE 147 (222)
T ss_dssp TTTEEEEEESSCCGG-GCEEEEEEEES----SSEEEEEEEEEEEBCCCCCEEEE--EEEETTTTEEEEEEEEE-EBSCCE
T ss_pred cCCEEEEEEcCcccc-cCeEEEEEEEe----CCCceeEEEEEEECCCCCCCcee--eeeecCCCcEEEEEEec-CCCCCe
Confidence 345779999999999 99999999987 23445567888887776665431 12667899999999995 699999
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|+++
T Consensus 148 i~W~~~ 153 (222)
T 3sbw_C 148 VIWTSS 153 (222)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 999975
No 10
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.50 E-value=7.2e-13 Score=78.86 Aligned_cols=78 Identities=31% Similarity=0.495 Sum_probs=63.8
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVT 95 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~ 95 (98)
.+|.|.+++.. |+|.|+|.+.+..+ ....+..+.|.|..+|..+.+.. ...+.+|+.+.|.|.+..+.|.|.+.|+
T Consensus 65 ~~L~i~~v~~~-D~G~Y~C~~~~~~g-~~~~~~~~~l~V~~~p~~~~~~~--~~~~~~g~~~~l~C~~~~~~p~~~i~W~ 140 (212)
T 1f97_A 65 SGITFSSVTRK-DNGEYTCMVSEEGG-QNYGEVSIHLTVLVPPSKPTISV--PSSVTIGNRAVLTCSEHDGSPPSEYSWF 140 (212)
T ss_dssp TEEEESCCCGG-GCEEEEEEEEETTS-SSEEEEEEEEEEEBCCCCCEEEC--CSEEETTSCEEEEEECSCCBSCCEEEEE
T ss_pred eeEEEcccCcc-cCeEEEEEEEccCC-CcccEEEEEEEEEcCCCCcccCC--ccccCCCCeEEEEEEcccCcCCCEEEEE
Confidence 46999999999 99999999998633 33556678888988888776643 3578899999999995568999999999
Q ss_pred ec
Q psy5866 96 LQ 97 (98)
Q Consensus 96 ~~ 97 (98)
++
T Consensus 141 ~~ 142 (212)
T 1f97_A 141 KD 142 (212)
T ss_dssp ET
T ss_pred eC
Confidence 75
No 11
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.49 E-value=2.7e-13 Score=79.93 Aligned_cols=82 Identities=16% Similarity=0.301 Sum_probs=64.0
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEE-eCCCCceecCCCcEEEEEEcCCCCCC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKI-SPGANPVATEGRAIELVCSTSGGSPD 89 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i-~~~~~~~~~~g~~~~l~C~~~~~~p~ 89 (98)
...+..+|.|.+++.. |+|.|+|.+.+. .......+.|.|...+.+|.+ .......+.+|+.+.|.|.+. +.|.
T Consensus 58 ~~~~~~~L~i~~~~~~-d~G~Y~C~~~n~---~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~-g~p~ 132 (194)
T 2a38_A 58 FSDGRAKLTIPAVTKA-NSGRYSLKATNG---SGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVT-GIPT 132 (194)
T ss_dssp EETTEEEEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEE-EESC
T ss_pred eCCCEEEEEECCCCcc-cCEEEEEEEEcC---CceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEE-EecC
Confidence 3456778999999999 999999999885 445555677888765555554 222456788999999999984 7899
Q ss_pred CeEEEEec
Q psy5866 90 PQISVTLQ 97 (98)
Q Consensus 90 ~~~~W~~~ 97 (98)
+.+.|+++
T Consensus 133 ~~v~W~~~ 140 (194)
T 2a38_A 133 PVVKFYRD 140 (194)
T ss_dssp CEEEEEET
T ss_pred CeEEEEEC
Confidence 99999975
No 12
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.49 E-value=1.6e-13 Score=81.74 Aligned_cols=76 Identities=17% Similarity=0.245 Sum_probs=61.5
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEE
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQIS 93 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~ 93 (98)
+..+|.|.+++.+ |+|.|+|.+.+. ....+..+.|.|..++..|.+.. ....+|+.+.|.|.+ .|.|.|.+.
T Consensus 65 ~~~~L~I~~v~~~-D~G~Y~C~~~~~---~~~~~~~~~l~V~~~~~~p~~~~---~~~~~g~~v~l~C~~-~g~P~p~v~ 136 (202)
T 3bp6_B 65 GKALFHIPSVQVR-DSGQYRCLVICG---AAWDYKYLTVKVKASYMRIDTRI---LEVPGTGEVQLTCQA-RGYPLAEVS 136 (202)
T ss_dssp TEEEEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEEBCCCCEEEEE---EECTTTCCEEEEEEE-EEBSCCEEE
T ss_pred CeeEEEECCCCHH-HCcEEEEEEEeC---CCcceEEEEEEecCCCCcccEEE---EecCCCCeEEEEEEc-cccCCceEE
Confidence 6689999999999 999999999985 44456778888887776666531 245689999999999 479999999
Q ss_pred EEec
Q psy5866 94 VTLQ 97 (98)
Q Consensus 94 W~~~ 97 (98)
|+++
T Consensus 137 W~~~ 140 (202)
T 3bp6_B 137 WQNV 140 (202)
T ss_dssp ETTC
T ss_pred EEeC
Confidence 9753
No 13
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.49 E-value=1.4e-13 Score=82.92 Aligned_cols=84 Identities=21% Similarity=0.280 Sum_probs=59.8
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCC-eeeEeeEEEEEECC-CCCCEEe-CCCCceecCCCcEEEEEEcCCCCCC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQ-DLHSQVYTVTVLTP-PQPPKIS-PGANPVATEGRAIELVCSTSGGSPD 89 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~-~~~~~~~~l~v~~~-~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~p~ 89 (98)
.+.++|+|.+++.+ |+|.|+|.+.+..... ........|.|... +.+|.+. ..+...+.+|+.+.|.|.+.++.|.
T Consensus 76 ~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~ 154 (219)
T 1c1e_H 76 ATTAYLQINNLKNE-DMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPE 154 (219)
T ss_dssp GTEEEEEECSCCGG-GCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSS
T ss_pred CCEEEEEECCCCcc-cCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCC
Confidence 45789999999999 9999999999853101 12233467777653 3445542 1233456789999999999754888
Q ss_pred C-eEEEEec
Q psy5866 90 P-QISVTLQ 97 (98)
Q Consensus 90 ~-~~~W~~~ 97 (98)
| .+.|+++
T Consensus 155 p~~v~W~~~ 163 (219)
T 1c1e_H 155 PVTVTWNSG 163 (219)
T ss_dssp CCEEEEGGG
T ss_pred CeEEEEEeC
Confidence 8 9999864
No 14
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.49 E-value=4.2e-13 Score=80.99 Aligned_cols=78 Identities=21% Similarity=0.428 Sum_probs=62.6
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeC-CCCceecCCCcE-EEEEEcCCCCCCCeEEE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISP-GANPVATEGRAI-ELVCSTSGGSPDPQISV 94 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~-~~~~~~~~g~~~-~l~C~~~~~~p~~~~~W 94 (98)
.|.|.+++.+ |+|.|+|.+.+.. ....+..+.|.|..+|..|.+.. .....+.+|+.+ .|.|.+..+.|.|.+.|
T Consensus 78 ~L~i~~v~~~-D~G~Y~C~~~~~~--~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W 154 (231)
T 2pet_A 78 RLVLAEAQVG-DERDYVCVVRAGA--AGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITW 154 (231)
T ss_dssp CEEESSCCGG-GCEEEEEEEECGG--GCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEE
T ss_pred eEEEcccCcc-cCceEEEEEEecC--CCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEE
Confidence 3999999999 9999999999852 14556678899988888787743 233557789887 99999856889999999
Q ss_pred Eec
Q psy5866 95 TLQ 97 (98)
Q Consensus 95 ~~~ 97 (98)
+++
T Consensus 155 ~~~ 157 (231)
T 2pet_A 155 YRN 157 (231)
T ss_dssp EET
T ss_pred EEC
Confidence 975
No 15
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.49 E-value=2.5e-13 Score=83.65 Aligned_cols=90 Identities=17% Similarity=0.233 Sum_probs=61.9
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC------------------CCEEeCCC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ------------------PPKISPGA 67 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~------------------~p~i~~~~ 67 (98)
|+......+.++|+|.+++.+ |+|.|+|.+.+.............|.|..++. .+.+....
T Consensus 64 r~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (256)
T 3ux9_B 64 RFSGSKSGTSASLAITGLQSE-DEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESG 142 (256)
T ss_dssp TEEEEEETTEEEEEECSCCGG-GCEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEEC
T ss_pred cEEEEccCCEEEEEECCCChh-hCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCC
Confidence 444444456789999999999 99999999998533223444456777765442 22343234
Q ss_pred CceecCCCcEEEEEEcCCCCC--CCeEEEEec
Q psy5866 68 NPVATEGRAIELVCSTSGGSP--DPQISVTLQ 97 (98)
Q Consensus 68 ~~~~~~g~~~~l~C~~~~~~p--~~~~~W~~~ 97 (98)
...+.+|+++.|.|.+. +.+ .+.+.|+++
T Consensus 143 ~~~v~~G~~v~L~C~~~-~~~~~~~~v~W~r~ 173 (256)
T 3ux9_B 143 GGLVQPGGSLRLSCAAS-GFTFSSYAMSWVRQ 173 (256)
T ss_dssp CEEECTTCCEEEEEEEE-SSCGGGSEEEEEEE
T ss_pred CeEEcCCCeEEEEEEEe-CCcccccEEEEEEE
Confidence 56789999999999986 444 689999986
No 16
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.48 E-value=1.8e-13 Score=82.61 Aligned_cols=85 Identities=25% Similarity=0.350 Sum_probs=59.4
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC-CCCCCEEeC-CCCceecCCCcEEEEEEcCCCCCC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT-PPQPPKISP-GANPVATEGRAIELVCSTSGGSPD 89 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~-~~~~p~i~~-~~~~~~~~g~~~~l~C~~~~~~p~ 89 (98)
..+.++|+|.+++.+ |+|.|+|.+.+.............|.|.. ++.+|.+.. .+...+.+|+.+.|.|.+.+..|.
T Consensus 77 ~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~ 155 (220)
T 1pz5_B 77 SKSSVYLQMNNLRAE-DTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPE 155 (220)
T ss_dssp GGTEEEEEECSCCGG-GCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSS
T ss_pred CCCeEEEEEccCCHH-HCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCC
Confidence 456789999999999 99999999998521111222346777763 334555421 123356789999999999755588
Q ss_pred C-eEEEEec
Q psy5866 90 P-QISVTLQ 97 (98)
Q Consensus 90 ~-~~~W~~~ 97 (98)
| .+.|+++
T Consensus 156 p~~v~W~~~ 164 (220)
T 1pz5_B 156 PVTVKWNYG 164 (220)
T ss_dssp CCEEEEGGG
T ss_pred CeEEEEecC
Confidence 8 9999864
No 17
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.48 E-value=1.1e-12 Score=80.30 Aligned_cols=84 Identities=19% Similarity=0.162 Sum_probs=59.8
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC------------CCCEE-eCCCCceecCCCcE
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP------------QPPKI-SPGANPVATEGRAI 77 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~------------~~p~i-~~~~~~~~~~g~~~ 77 (98)
...+.++|+|.+++.+ |+|.|+|.+.+.. ..........|.|..++ .++.+ .......+.+|+.+
T Consensus 76 ~~~~~~~L~I~~v~~~-D~G~Y~C~~~n~~-~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v 153 (247)
T 2ghw_B 76 NSKNTLYLQMNSLRAE-DTAVYYCARDRSY-YLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERA 153 (247)
T ss_dssp TTTTEEEEEECSCCGG-GCEEEEEEEEETT-EEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCE
T ss_pred CCCCEEEEEECcCCHH-HCEEEEEeeeccC-CccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcE
Confidence 3566789999999999 9999999999841 01122334577776542 23333 22234578999999
Q ss_pred EEEEEcCCCCCCCeEEEEec
Q psy5866 78 ELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 78 ~l~C~~~~~~p~~~~~W~~~ 97 (98)
.|.|.+. +.|.+.+.|+++
T Consensus 154 ~L~C~~~-~~~~~~v~W~k~ 172 (247)
T 2ghw_B 154 TLSCRAS-QSVRSNLAWYQQ 172 (247)
T ss_dssp EEEEEES-SCCTTCEEEEEE
T ss_pred EEEEEeC-CCccceEEEEEE
Confidence 9999986 677789999983
No 18
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.47 E-value=5.1e-13 Score=81.37 Aligned_cols=77 Identities=21% Similarity=0.310 Sum_probs=62.3
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCC---
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPD--- 89 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~--- 89 (98)
.+...|.|.+++++ |+|.|+|.+.+. .......+.|+|+.+|..+.+.+ ....+|+.. |+|.+.++.|.
T Consensus 56 ~~~~~L~I~~v~~~-d~G~Y~C~a~n~---~~~~~~~~~ltV~~~P~~~~i~~---~~~~~g~~~-l~C~a~g~~P~~~~ 127 (210)
T 1gsm_A 56 TGRSVLTVRNASLS-AAGTRVCVGSCG---GRTFQHTVQLLVYAFPNQLTVSP---AALVPGDPE-VACTAHKVTPVDPN 127 (210)
T ss_dssp SSEEEEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEEBCCSEEEEES---SSBCTTCCE-EEEEEEEEBCCCTT
T ss_pred CCccEEEECccCcc-cCceEEEEEEeC---CCceEEEEEEEEEecCCCcEEcc---ceEEeCCce-EEEEeCCCCCCCCC
Confidence 45668999999999 999999999985 45566778999998888777653 267778888 99999866674
Q ss_pred -CeEEEEec
Q psy5866 90 -PQISVTLQ 97 (98)
Q Consensus 90 -~~~~W~~~ 97 (98)
+++.|+++
T Consensus 128 ~lti~Wlk~ 136 (210)
T 1gsm_A 128 ALSFSLLVG 136 (210)
T ss_dssp TEEEEEEET
T ss_pred CcEEEEEEC
Confidence 48999985
No 19
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.47 E-value=4.9e-13 Score=79.58 Aligned_cols=82 Identities=17% Similarity=0.256 Sum_probs=53.7
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCe
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQ 91 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 91 (98)
......|.|.+++.+ |+|.|+|.+.+..+ ....+..+.|.|...+.+|.+...+...+.+|+.+.|.|.+. +.| +.
T Consensus 54 ~~~~~~L~i~~v~~~-D~G~Y~C~a~n~~g-~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~-~~p-~~ 129 (196)
T 2d3v_A 54 PKNKARFSIPSMTEH-HAGRYRCYYYSPAG-WSEPSDPLELVVTGFYNKPTLSALPSPVVTSGENVTLQCGSR-LRF-DR 129 (196)
T ss_dssp STTEEEEEESSCCGG-GCEEEEEEEEETTE-ECBCCCCEEEEEECSSCCCEEEC-----------CEEEEEES-SCC-SE
T ss_pred CccccEEEeccCChh-HCeEEEEEEeCCCC-cCCcCccEEEEecCCCCCCeEEccCCccccCCCcEEEEEEcC-CCC-CE
Confidence 345678999999999 99999999987421 112245577888765556777543445788999999999986 566 89
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|+++
T Consensus 130 ~~W~k~ 135 (196)
T 2d3v_A 130 FILTEE 135 (196)
T ss_dssp EEEEEC
T ss_pred EEEEcc
Confidence 999975
No 20
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.47 E-value=2.8e-13 Score=80.27 Aligned_cols=71 Identities=24% Similarity=0.220 Sum_probs=56.1
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEE
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQIS 93 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~ 93 (98)
++.+|+|.+++.+ |+|.|+|.+.+. . .....+.|.|+.++..|.+.. .+..+.|+|.+..| |.|.+.
T Consensus 67 ~~~sL~I~~v~~~-D~G~Y~C~v~~~---~-~~~~~~~L~V~~~~~~P~i~~-------~~~~v~L~C~~~~g-p~p~i~ 133 (180)
T 2dru_A 67 TNGALRIYNVSKE-DRGDYYMRMLHE---T-EDQWKITMEVYEMVSKPMIYW-------ECSNATLTCEVLEG-TDVELK 133 (180)
T ss_dssp TTCCEEECSCCGG-GCEEEEEEEESS---S-EEEEEEEEEEECCCCCCEEEE-------EGGGTEEEEECSSC-TTCEEE
T ss_pred CCccEEEcCCCHH-HCeEEEEEEEcC---C-eEEEEEEEEEECCCCCCEEEe-------cCCCEEEEEEeCCC-CCCEEE
Confidence 4557999999999 999999999874 2 556678899987777776632 23568999999656 899999
Q ss_pred EEec
Q psy5866 94 VTLQ 97 (98)
Q Consensus 94 W~~~ 97 (98)
|+++
T Consensus 134 W~~~ 137 (180)
T 2dru_A 134 LYQG 137 (180)
T ss_dssp EEET
T ss_pred EEEC
Confidence 9975
No 21
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.47 E-value=5.1e-13 Score=82.51 Aligned_cols=86 Identities=14% Similarity=0.104 Sum_probs=59.8
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC--------------CCEE-eCCCCceecCCC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ--------------PPKI-SPGANPVATEGR 75 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~--------------~p~i-~~~~~~~~~~g~ 75 (98)
...+.++|+|.+++.+ |+|.|+|.+.+.............|.|..++. .+.+ .......+.+|+
T Consensus 74 ~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~ 152 (259)
T 3omz_A 74 STRKNLRMILRNLIEN-DSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRK 152 (259)
T ss_dssp C--CCCEEEESSCCGG-GCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTC
T ss_pred CCCCeEEEEECCCCcc-cCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCC
Confidence 4456678999999999 99999999987532122444456777775421 2334 223457889999
Q ss_pred cEEEEEEcCCCCCCCeEEEEec
Q psy5866 76 AIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 76 ~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
++.|.|.+....|.+.+.|+++
T Consensus 153 ~v~L~C~~~~~~~~~~v~W~k~ 174 (259)
T 3omz_A 153 AVTLNCLYETSWWSYYIFWYKR 174 (259)
T ss_dssp CEEECCEEECCCSSCEEEEEEE
T ss_pred CEEEEEECCCccCCceEEEeee
Confidence 9999998865457889999985
No 22
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.47 E-value=2.7e-13 Score=81.89 Aligned_cols=86 Identities=17% Similarity=0.200 Sum_probs=59.4
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC-CCCCCEEe-CCCCceecCCCcEEEEEEcCCCCC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT-PPQPPKIS-PGANPVATEGRAIELVCSTSGGSP 88 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~-~~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~p 88 (98)
...+.++|+|.+++.+ |+|.|.|.+.+.............|.|.. ++.+|.+. ..+...+.+|+.+.|.|.+.+..|
T Consensus 73 ~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P 151 (215)
T 1c5d_H 73 TSKSQVFLKMNSLQTE-DTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFP 151 (215)
T ss_dssp TTTTEEEEEESSCCGG-GCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBS
T ss_pred CCCceEEEEECCCCcc-cCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEc
Confidence 3456789999999999 99999999987421111222345777763 33445442 112334678999999999986558
Q ss_pred CC-eEEEEec
Q psy5866 89 DP-QISVTLQ 97 (98)
Q Consensus 89 ~~-~~~W~~~ 97 (98)
.| .+.|+++
T Consensus 152 ~p~~v~W~~~ 161 (215)
T 1c5d_H 152 EPVTVTWNSG 161 (215)
T ss_dssp SCCEEEEGGG
T ss_pred CCcEEEEccC
Confidence 77 9999864
No 23
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.47 E-value=2.8e-14 Score=85.98 Aligned_cols=78 Identities=21% Similarity=0.416 Sum_probs=58.7
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEE
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQIS 93 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~ 93 (98)
++.+|.|.+++.+ |+|.|+|.+.+. ...+..+.|.|..++..|.+.......+.+|+.+.|.|.+..+.|.+.+.
T Consensus 70 ~~~sL~I~~v~~~-D~G~Y~C~~~~~----~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~~~v~ 144 (222)
T 4i0k_A 70 GNASLRLQRVRVT-DEGSYTCFVSIQ----DFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVF 144 (222)
T ss_dssp TBCCEEECSCCGG-GCSCEEEEEEEC----CCCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBSCCEEE
T ss_pred CeEEEEECCcccc-cCEEEEEEEEeC----CCceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecccccCCCeEE
Confidence 4678999999999 999999999984 23344556777666677777544455778899999999986688999999
Q ss_pred EEe
Q psy5866 94 VTL 96 (98)
Q Consensus 94 W~~ 96 (98)
|++
T Consensus 145 W~~ 147 (222)
T 4i0k_A 145 WKD 147 (222)
T ss_dssp EEC
T ss_pred EEc
Confidence 987
No 24
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.47 E-value=6.6e-13 Score=80.62 Aligned_cols=85 Identities=18% Similarity=0.193 Sum_probs=59.7
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCC---CCeeeEeeEEEEEEC-CCCCCEEeC-CCCceecCCCcEEEEEEcCC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGS---GQDLHSQVYTVTVLT-PPQPPKISP-GANPVATEGRAIELVCSTSG 85 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~---~~~~~~~~~~l~v~~-~~~~p~i~~-~~~~~~~~g~~~~l~C~~~~ 85 (98)
...+.++|+|.+++.+ |+|.|.|.+.+..+ ..........|.|.. ++.+|.+.. .+...+.+|+.+.|.|.+.+
T Consensus 74 ~~~~~~sL~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g 152 (223)
T 1dee_B 74 NSKNTLYLQMNSLRAE-DTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQD 152 (223)
T ss_dssp TTTTEEEEEECSCCGG-GCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEE
T ss_pred CCCCEEEEEECCCCHH-HCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEE
Confidence 3456889999999999 99999999987421 011222345788863 345555521 12334678999999999986
Q ss_pred CCCCC-eEEEEe
Q psy5866 86 GSPDP-QISVTL 96 (98)
Q Consensus 86 ~~p~~-~~~W~~ 96 (98)
..|.+ .+.|++
T Consensus 153 ~~P~p~~v~W~~ 164 (223)
T 1dee_B 153 FLPDSITFSWKY 164 (223)
T ss_dssp EBSSCCEEEEEE
T ss_pred EeCCCeEEEeEc
Confidence 66776 999998
No 25
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.46 E-value=2.4e-13 Score=81.78 Aligned_cols=90 Identities=9% Similarity=0.093 Sum_probs=61.5
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeC-CCCceecCCCcEEEEEEcC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISP-GANPVATEGRAIELVCSTS 84 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~-~~~~~~~~g~~~~l~C~~~ 84 (98)
|+......+.++|+|.+++.+ |+|.|+|.+.+... .........|.|...+.+|.+.. .+.....+|+.+.|.|.+.
T Consensus 62 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~-~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~ 139 (216)
T 2xzc_L 62 RFSGSKSGTSATLGITGLQTG-DEADYYCGTWDSSL-NPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLN 139 (216)
T ss_dssp TEEEEEETTEEEEEECSCCGG-GCEEEEEEEECTTS-CEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEE
T ss_pred ceEEeccCCEEEEEECCCCcc-cCEEEEEEEEeCCC-cceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEE
Confidence 444444456779999999999 99999999998532 12233345677765545565521 1223344688999999997
Q ss_pred CCCCCC-eEEEEec
Q psy5866 85 GGSPDP-QISVTLQ 97 (98)
Q Consensus 85 ~~~p~~-~~~W~~~ 97 (98)
++.|.+ .+.|+++
T Consensus 140 g~~P~~~~v~W~k~ 153 (216)
T 2xzc_L 140 NFYPREAKVQWKVD 153 (216)
T ss_dssp EEBSSCCEEEEEET
T ss_pred eEcCCceEEEEEEC
Confidence 556665 8999985
No 26
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.46 E-value=3.5e-13 Score=81.68 Aligned_cols=85 Identities=19% Similarity=0.148 Sum_probs=59.6
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC-CCCCEEeCCCCceecCCCcEEEEEEcCCCCCC-
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP-PQPPKISPGANPVATEGRAIELVCSTSGGSPD- 89 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~-~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~- 89 (98)
..+.++|+|.+++.+ |+|.|.|.+.+.............|.|... +.+|.+.......+.+|+.+.|.|.+.+..|.
T Consensus 75 ~~~~~~L~I~~v~~~-DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~g~~v~L~C~~~g~~P~~ 153 (220)
T 2fbj_H 75 AKNSLYLQMSKVRSE-DTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLTLPPALSSDPVIIGCLIHDYFPSG 153 (220)
T ss_dssp SSCEEEEEECSCCGG-GCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEECCCSSSCCSSEEEEEEEEEEBSCC
T ss_pred CCCEEEEEECCCChh-hCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEeecccccCCCcEEEEEEEEeEECCC
Confidence 456789999999999 999999999985210002233457888643 24455532123456789999999999865576
Q ss_pred -CeEEEEec
Q psy5866 90 -PQISVTLQ 97 (98)
Q Consensus 90 -~~~~W~~~ 97 (98)
+.+.|+++
T Consensus 154 ~~~v~W~~~ 162 (220)
T 2fbj_H 154 TMNVTWGKS 162 (220)
T ss_dssp CEEEEESCC
T ss_pred cEEEEEecC
Confidence 79999864
No 27
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.46 E-value=1.2e-13 Score=83.79 Aligned_cols=89 Identities=13% Similarity=0.167 Sum_probs=63.3
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeC-CCCceecCCCcEEEEEEcC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISP-GANPVATEGRAIELVCSTS 84 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~-~~~~~~~~g~~~~l~C~~~ 84 (98)
++......+.++|+|.+++.+ |+|.|+|.+.+... ........+.|...+.+|.+.. .......+|+.+.|.|.+.
T Consensus 84 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~--~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~ 160 (237)
T 3sob_L 84 RFSGSGSGTDFTLTISSLQPE-DFATYYCQQSYTTP--PTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLN 160 (237)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSSSS--CEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEE
T ss_pred cEEEEcCCCEEEEEECCCChh-hCeEEEEeeccCCc--eEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEc
Confidence 444444457889999999999 99999999987421 2233445677766666666621 2334455688899999997
Q ss_pred CCCC-CCeEEEEec
Q psy5866 85 GGSP-DPQISVTLQ 97 (98)
Q Consensus 85 ~~~p-~~~~~W~~~ 97 (98)
++.| .+.+.|+++
T Consensus 161 ~~~p~~~~v~W~k~ 174 (237)
T 3sob_L 161 NFYPREAKVQWKVD 174 (237)
T ss_dssp EEBSSCCEEEEEET
T ss_pred ccCCCceEEEEEEC
Confidence 6566 689999975
No 28
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.45 E-value=1.5e-12 Score=80.33 Aligned_cols=86 Identities=12% Similarity=0.061 Sum_probs=60.9
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECC---------CCCeeeEeeEEEEEECCCC------------CC-EEeCCC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAG---------SGQDLHSQVYTVTVLTPPQ------------PP-KISPGA 67 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~---------~~~~~~~~~~~l~v~~~~~------------~p-~i~~~~ 67 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+.. ...........|.|...+. .+ .+....
T Consensus 79 ~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (256)
T 3juy_B 79 DTSANTAYMELRSLRSA-DTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPG 157 (256)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECS
T ss_pred ecCCCEEEEEECCCCcc-cCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCC
Confidence 35677889999999999 9999999998740 0122333446677765432 22 333335
Q ss_pred CceecCCCcEEEEEEcCCCCCC-CeEEEEec
Q psy5866 68 NPVATEGRAIELVCSTSGGSPD-PQISVTLQ 97 (98)
Q Consensus 68 ~~~~~~g~~~~l~C~~~~~~p~-~~~~W~~~ 97 (98)
...+.+|+++.|.|.+.+ .|. +.+.|+++
T Consensus 158 ~~~v~~G~~v~L~C~~~~-~~~~~~v~W~k~ 187 (256)
T 3juy_B 158 TLSLSPGERATFSCRSSH-SIRSRRVAWYQH 187 (256)
T ss_dssp EEEECTTSCEEEEEEESS-CCTTCCEEEEEE
T ss_pred eEEEeCCCCEEEEEEECC-CcCCeeEEEEEE
Confidence 578899999999999874 554 89999984
No 29
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.45 E-value=2.7e-13 Score=81.40 Aligned_cols=85 Identities=22% Similarity=0.245 Sum_probs=60.3
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCC--CeeeEeeEEEEEECCC-CCCEEeC-CCCceecCCCcEEEEEEcCCCC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSG--QDLHSQVYTVTVLTPP-QPPKISP-GANPVATEGRAIELVCSTSGGS 87 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~--~~~~~~~~~l~v~~~~-~~p~i~~-~~~~~~~~g~~~~l~C~~~~~~ 87 (98)
..+.++|+|.+++.+ |+|.|+|.+.+..+. .........|.|...+ .+|.+.. ........|+.+.|.|.+.++.
T Consensus 71 ~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~ 149 (218)
T 3s96_B 71 SGADRYLSISNIQPE-DEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFS 149 (218)
T ss_dssp ETTEEEEEESSCCGG-GCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEB
T ss_pred CCceEEEEEccCCcc-cCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECccc
Confidence 556788999999999 999999999884210 0133445678887544 4455521 2344556778899999997556
Q ss_pred CCC-eEEEEec
Q psy5866 88 PDP-QISVTLQ 97 (98)
Q Consensus 88 p~~-~~~W~~~ 97 (98)
|.+ .+.|+++
T Consensus 150 p~~~~v~W~k~ 160 (218)
T 3s96_B 150 PSGVTVAWKAN 160 (218)
T ss_dssp SSCCEEEEEET
T ss_pred CCCeEEEEEEC
Confidence 777 8999975
No 30
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.45 E-value=1.3e-12 Score=76.91 Aligned_cols=86 Identities=22% Similarity=0.315 Sum_probs=63.3
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSG 85 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~ 85 (98)
++.+....+..+|.|.+++.+ |+|.|+|.+.+..+ ...+..+.|.|..+|.. ........+.+|+.+.|.|.+.
T Consensus 48 ~~~~~~~~~~~~L~i~~~~~~-d~G~Y~C~~~~~~g--~~~~~~~~l~v~~~p~~--~~~~~~~~~~~g~~~~l~C~~~- 121 (189)
T 2v44_A 48 RVVVQKEGVRSRLTIYNANIE-DAGIYRCQATDAKG--QTQEATVVLEIYQKLTF--REVVSPQEFKQGEDAEVVCRVS- 121 (189)
T ss_dssp SEEEEEETTEEEEEECSCCGG-GCEEEEEEEECTTS--CEEEEEEEEEEECCCEE--ESCCCSEEEETTSCEEECCEEE-
T ss_pred eEEEECCCCeEEEEEccCCcc-cCeEEEEEEEeCCC--CcEEEEEEEEEecCCce--eecCCcEEEeCCCCEEEEEEEC-
Confidence 344444455678999999999 99999999998532 23355677787755432 2222446788999999999986
Q ss_pred CCCCCeEEEEec
Q psy5866 86 GSPDPQISVTLQ 97 (98)
Q Consensus 86 ~~p~~~~~W~~~ 97 (98)
+.|.|.+.|+++
T Consensus 122 g~p~p~v~W~~~ 133 (189)
T 2v44_A 122 SSPAPAVSWLYH 133 (189)
T ss_dssp CSSCCEEEEEEE
T ss_pred cCCCCcEEEEEC
Confidence 789999999874
No 31
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.45 E-value=6.2e-13 Score=80.79 Aligned_cols=86 Identities=20% Similarity=0.209 Sum_probs=59.4
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCCC----C-eeeEeeEEEEEEC-CCCCCEEe-CCCCceecCCCcEEEEEEc
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSG----Q-DLHSQVYTVTVLT-PPQPPKIS-PGANPVATEGRAIELVCST 83 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~----~-~~~~~~~~l~v~~-~~~~p~i~-~~~~~~~~~g~~~~l~C~~ 83 (98)
...+.++|+|.+++.+ |+|.|+|.+.+..+. . ........|.|.. ++.+|.+. ..+...+.+|+.+.|.|.+
T Consensus 74 ~~~~~~sL~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~ 152 (225)
T 1op3_H 74 DLEDFVYLQMHKMRVE-DTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLV 152 (225)
T ss_dssp TTTTEEEEEECSCCGG-GCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEE
T ss_pred CCCCEEEEEECCCChh-hCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEE
Confidence 3456789999999999 999999999975210 1 1222346788875 33445442 1122345789999999999
Q ss_pred CCCCCCC-eEEEEec
Q psy5866 84 SGGSPDP-QISVTLQ 97 (98)
Q Consensus 84 ~~~~p~~-~~~W~~~ 97 (98)
.+..|.+ .+.|+++
T Consensus 153 ~g~~P~p~~v~W~~~ 167 (225)
T 1op3_H 153 KDYFPEPVTVSWNSG 167 (225)
T ss_dssp EEEBSSCCEEECCTT
T ss_pred EeEECCCeEEEEecC
Confidence 7555776 9999864
No 32
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.45 E-value=2.2e-13 Score=81.62 Aligned_cols=89 Identities=15% Similarity=0.116 Sum_probs=62.0
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEe-CCCCceecCCCcEEEEEEcC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKIS-PGANPVATEGRAIELVCSTS 84 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~-~~~~~~~~~g~~~~l~C~~~ 84 (98)
|+......+.++|+|.+++.+ |+|.|+|.+.+.. .........|.|.....+|.+. .........|..+.|.|.+.
T Consensus 61 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~--~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~ 137 (213)
T 3r06_A 61 RFSGSGSGRDSSFTISSLESE-DIGSYYCQQYYNY--PWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVN 137 (213)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCSEEEEEECSSS--SCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEE
T ss_pred cEEEeccCCEEEEEECCCCcc-cCEEEEEecccCC--ceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEe
Confidence 444444557789999999999 9999999998742 1233344567775555666652 12344566788899999997
Q ss_pred CCCC-CCeEEEEec
Q psy5866 85 GGSP-DPQISVTLQ 97 (98)
Q Consensus 85 ~~~p-~~~~~W~~~ 97 (98)
++.| .+.+.|+++
T Consensus 138 g~~p~~~~v~W~k~ 151 (213)
T 3r06_A 138 NFYPKDINVKWKVD 151 (213)
T ss_dssp EEBSSCEEEEEEET
T ss_pred eecCCceEEEEEEC
Confidence 5444 458999975
No 33
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.45 E-value=4.4e-13 Score=81.01 Aligned_cols=85 Identities=20% Similarity=0.283 Sum_probs=58.7
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCe--eeEeeEEEEEEC-CCCCCEEe-CCCCceecCCCcEEEEEEcCCCC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQD--LHSQVYTVTVLT-PPQPPKIS-PGANPVATEGRAIELVCSTSGGS 87 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~--~~~~~~~l~v~~-~~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~ 87 (98)
..+.++|+|.+++.+ |+|.|.|.+.+...... .......|.|.. ++..|.+. ......+.+|+.+.|.|.+.+..
T Consensus 77 ~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~ 155 (222)
T 1q9r_B 77 SQSILYLQMNTLRAE-DSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYF 155 (222)
T ss_dssp TTTEEEEEECSCCGG-GCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEB
T ss_pred CCCeEEEEECcCCcc-cCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEE
Confidence 456789999999999 99999999987421000 222345677764 23445542 11233467899999999997556
Q ss_pred CCC-eEEEEec
Q psy5866 88 PDP-QISVTLQ 97 (98)
Q Consensus 88 p~~-~~~W~~~ 97 (98)
|.| .+.|+++
T Consensus 156 P~p~~v~W~~~ 166 (222)
T 1q9r_B 156 PEPVTVTWNSG 166 (222)
T ss_dssp SSCCEEEEGGG
T ss_pred CCCCEEEEecC
Confidence 888 9999864
No 34
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.44 E-value=1.9e-13 Score=81.90 Aligned_cols=91 Identities=20% Similarity=0.251 Sum_probs=61.4
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC-CCCEEeC-CCCceecCCCcEEEEEEc
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP-QPPKISP-GANPVATEGRAIELVCST 83 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~-~~p~i~~-~~~~~~~~g~~~~l~C~~ 83 (98)
|+......+.++|+|.+++.+ |+|.|+|.+.+.............|.|...+ .+|.+.. .......+|+.+.|.|.+
T Consensus 59 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~ 137 (212)
T 1nfd_E 59 RFSGSTSGTTATLTISGAQPE-DEAAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLV 137 (212)
T ss_dssp TEEEEEETTEEEEEETTCCGG-GCSEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEE
T ss_pred cEEEEeeCCEEEEEECcCCcc-cCEEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEE
Confidence 344444456789999999999 9999999999731212222334567775433 4555532 233445679999999999
Q ss_pred CCCCCC-CeEEEEec
Q psy5866 84 SGGSPD-PQISVTLQ 97 (98)
Q Consensus 84 ~~~~p~-~~~~W~~~ 97 (98)
.+..|+ +.+.|+++
T Consensus 138 ~g~~p~~~~v~W~k~ 152 (212)
T 1nfd_E 138 NDFYPGSATVTWKAN 152 (212)
T ss_dssp EEEBSSCCEEEEEET
T ss_pred EeeECCccEEEEEEC
Confidence 755465 89999975
No 35
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.44 E-value=2.4e-12 Score=79.37 Aligned_cols=85 Identities=21% Similarity=0.206 Sum_probs=58.9
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCCC-CeeeEeeEEEEEECCC-----------CCCEE-eCCCCceecCCCcE
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSG-QDLHSQVYTVTVLTPP-----------QPPKI-SPGANPVATEGRAI 77 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~-~~~~~~~~~l~v~~~~-----------~~p~i-~~~~~~~~~~g~~~ 77 (98)
...+.++|+|.+++.+ |+|.|+|.+.+.... .........|.|..++ ..+.+ .......+.+|+++
T Consensus 81 ~~~~~~~L~I~~v~~~-DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v 159 (257)
T 3gkz_A 81 TSKNQVYLQLKSVSSE-DTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKV 159 (257)
T ss_dssp GGGTEEEEEECSCCGG-GCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCE
T ss_pred cCCceEEEEECCCChh-hCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcE
Confidence 4456789999999999 999999999884211 1223344677776541 12334 22234678999999
Q ss_pred EEEEEcCCCCCCC-eEEEEec
Q psy5866 78 ELVCSTSGGSPDP-QISVTLQ 97 (98)
Q Consensus 78 ~l~C~~~~~~p~~-~~~W~~~ 97 (98)
.|.|.+. +.|.+ .+.|+++
T Consensus 160 ~L~C~~~-~~~~~~~v~W~k~ 179 (257)
T 3gkz_A 160 TLTCSAS-SSVSSSHLYWYQQ 179 (257)
T ss_dssp EEEEEES-SCCCGGGEEEEEE
T ss_pred EEEEEEc-cCccceEEEEEEE
Confidence 9999986 46666 8999985
No 36
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.44 E-value=2.4e-12 Score=80.67 Aligned_cols=84 Identities=24% Similarity=0.206 Sum_probs=58.6
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCCC--CeeeEeeEEEEEECCCC------------CCEE-eCCCCceecCCC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSG--QDLHSQVYTVTVLTPPQ------------PPKI-SPGANPVATEGR 75 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~--~~~~~~~~~l~v~~~~~------------~p~i-~~~~~~~~~~g~ 75 (98)
...+.++|+|.+++.+ |+|.|+|.+.+..+. .........|.|..++. ++.+ .......+.+|+
T Consensus 100 ~~~~~~sL~I~~v~~~-DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~ 178 (282)
T 1qok_A 100 TSSNTAYLQLSSLTSE-DTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGE 178 (282)
T ss_dssp TTTTEEEEEECSCCGG-GCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTC
T ss_pred cCCCeEEEEECcCChh-hCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCC
Confidence 3456789999999999 999999999985320 11222345778876541 2333 222345789999
Q ss_pred cEEEEEEcCCCCCCCeEEEEec
Q psy5866 76 AIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 76 ~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
++.|.|.+. +.| +.+.|+++
T Consensus 179 ~v~L~C~~~-~~~-~~v~W~k~ 198 (282)
T 1qok_A 179 KVTITCSAS-SSV-SYMHWFQQ 198 (282)
T ss_dssp CEEEEEEES-SCC-SCCEEEEE
T ss_pred cEEEEEEec-CCC-ceEEEEEE
Confidence 999999986 566 89999984
No 37
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.44 E-value=2.4e-13 Score=81.56 Aligned_cols=81 Identities=21% Similarity=0.331 Sum_probs=57.8
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC-CCCCCEEe-CCCCceecCCCcEEEEEEcCCCCCC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT-PPQPPKIS-PGANPVATEGRAIELVCSTSGGSPD 89 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~-~~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~p~ 89 (98)
..+.++|+|.+++.+ |+|.|+|.+.+. . .......|.|.. ++.+|.+. ..+...+.+|+.+.|.|.+.+..|.
T Consensus 74 ~~~~~~L~I~~v~~~-D~G~Y~C~~~~~---~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~ 148 (210)
T 3d9a_H 74 SKNQYYLDLNSVTTE-DTATYYCANWDG---D-YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPE 148 (210)
T ss_dssp GGTEEEEEECSCCGG-GCEEEEEEETTS---S-CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSS
T ss_pred CCCEEEEEECCCCcc-cCEEEEEEEecC---c-ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecC
Confidence 345789999999999 999999999873 1 222235677753 34455552 1123456789999999999755587
Q ss_pred C-eEEEEec
Q psy5866 90 P-QISVTLQ 97 (98)
Q Consensus 90 ~-~~~W~~~ 97 (98)
| .+.|+++
T Consensus 149 p~~v~W~~~ 157 (210)
T 3d9a_H 149 PVTVTWNSG 157 (210)
T ss_dssp CCEEEEGGG
T ss_pred CcEEEEeeC
Confidence 7 9999864
No 38
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.44 E-value=7.8e-13 Score=81.75 Aligned_cols=84 Identities=19% Similarity=0.195 Sum_probs=58.4
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCC------CCeeeEeeEEEEEECCCC------------CCEE-eCCCCceec
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGS------GQDLHSQVYTVTVLTPPQ------------PPKI-SPGANPVAT 72 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~------~~~~~~~~~~l~v~~~~~------------~p~i-~~~~~~~~~ 72 (98)
..+.++|+|.+++.+ |+|.|+|.+.+..+ ..........|.|..++. ++.+ .......+.
T Consensus 74 ~~~~~~L~I~~v~~~-DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~ 152 (257)
T 1f3r_B 74 SKNQVFLKMNSLQTD-DTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSAS 152 (257)
T ss_dssp TTTEEEEEEESCCTT-CCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCC
T ss_pred CCCEEEEEECCCCcc-cCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEc
Confidence 467789999999999 99999999998521 011122345777765431 1222 112345688
Q ss_pred CCCcEEEEEEcCCCCCCCeEEEEec
Q psy5866 73 EGRAIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 73 ~g~~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
+|+.+.|.|.+. +.|.+.+.|+++
T Consensus 153 ~G~~v~L~C~~~-~~~~~~v~W~k~ 176 (257)
T 1f3r_B 153 VGDRVTLSCKGS-QNINNYLAWYQQ 176 (257)
T ss_dssp TTCCEEEEEECS-SCCBTCEEEEEE
T ss_pred CCCCEEEEEEEC-CcCCCcEEEEEE
Confidence 999999999986 667789999984
No 39
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.44 E-value=4.5e-13 Score=81.73 Aligned_cols=82 Identities=13% Similarity=0.271 Sum_probs=60.3
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCe--eeEeeEEEEEECCCCCC--EEeCCCCceecCCCcEEEEEEcCCCCCC
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQD--LHSQVYTVTVLTPPQPP--KISPGANPVATEGRAIELVCSTSGGSPD 89 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~--~~~~~~~l~v~~~~~~p--~i~~~~~~~~~~g~~~~l~C~~~~~~p~ 89 (98)
+.++|+|.+++.+ |+|.|+|.+.+...... ..+..+.|.|..++.+| .+.......+.+|+.+.|.|.+. +.|.
T Consensus 88 ~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~-g~p~ 165 (250)
T 2fbo_J 88 AAPTLRLTHVHPQ-DGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCT-DCAN 165 (250)
T ss_dssp TSCCEEECSCCGG-GCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEE-SCTT
T ss_pred CcceEEEeeCChh-hCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEec-CCCC
Confidence 3467999999999 99999999998533221 12456788887654333 33332345677899999999986 6788
Q ss_pred CeEEEEec
Q psy5866 90 PQISVTLQ 97 (98)
Q Consensus 90 ~~~~W~~~ 97 (98)
|.+.|+++
T Consensus 166 p~v~W~k~ 173 (250)
T 2fbo_J 166 ANVTWYTG 173 (250)
T ss_dssp CEEEEEEE
T ss_pred CeeEEEeC
Confidence 89999975
No 40
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.43 E-value=4e-13 Score=80.45 Aligned_cols=90 Identities=16% Similarity=0.196 Sum_probs=61.9
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC-CCCEEeC-CCCceecCCCcEEEEEEc
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP-QPPKISP-GANPVATEGRAIELVCST 83 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~-~~p~i~~-~~~~~~~~g~~~~l~C~~ 83 (98)
|+.+....+.++|+|.+++.+ |+|.|+|.+.+..+ .........|.|...+ .+|.+.. .......+|+.+.|.|.+
T Consensus 58 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~-~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~ 135 (211)
T 3tv3_L 58 RFSGSKSGNTASLTVSGLQTD-DEAVYYCGSLVGNW-DVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLI 135 (211)
T ss_dssp TEEEEEETTEEEEEEESCCGG-GCEEEEEEEEETTT-EEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEE
T ss_pred cEEEEccCCEEEEEECCCChh-HCEEEEEEEecCCC-ceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEe
Confidence 444444566789999999999 99999999998522 0234455677776332 4455421 133445579999999998
Q ss_pred CCCCC-CCeEEEEec
Q psy5866 84 SGGSP-DPQISVTLQ 97 (98)
Q Consensus 84 ~~~~p-~~~~~W~~~ 97 (98)
.+..| .+.+.|+++
T Consensus 136 ~g~~p~~~~v~W~k~ 150 (211)
T 3tv3_L 136 SDFYPGAVTVAWKAD 150 (211)
T ss_dssp EEEBSSCCEEEEEET
T ss_pred eeecCCCeEEEEEEC
Confidence 74443 678999975
No 41
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.43 E-value=1.8e-12 Score=80.46 Aligned_cols=81 Identities=15% Similarity=0.216 Sum_probs=61.9
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDP 90 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~ 90 (98)
...+..+|.|.+++.+ |+|.|+|.+.+. ....+..+.|.|..+|.. .........+.+|+.+.|.|.+. |.|.+
T Consensus 56 ~~~~~~~L~i~~v~~~-d~G~Y~C~~~n~---~g~~~~~~~l~V~~~p~~-~~~~~~~~~v~~g~~~~l~C~~~-g~p~~ 129 (284)
T 2rik_A 56 LVENTATLTVLKVTKG-DAGQYTCYASNV---AGKDSCSAQLGVQEPPRF-IKKLEPSRIVKQDEHTRYECKIG-GSPEI 129 (284)
T ss_dssp EETTEEEEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEECCCEE-EECCCSEEEEETTCCEEEEEEEE-SSSCC
T ss_pred EcCCEEEEEEecCCcc-cCEEEEEEEEEC---CceEEEEEEEEccCCCcc-cccCCCceEecCCceEEEEEEEe-eeCCC
Confidence 3345678999999999 999999999985 455566778888765432 11222334688999999999985 78999
Q ss_pred eEEEEec
Q psy5866 91 QISVTLQ 97 (98)
Q Consensus 91 ~~~W~~~ 97 (98)
.+.|+++
T Consensus 130 ~v~W~~~ 136 (284)
T 2rik_A 130 KVLWYKD 136 (284)
T ss_dssp EEEEEET
T ss_pred EEEEEEC
Confidence 9999975
No 42
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.43 E-value=5.2e-13 Score=83.90 Aligned_cols=82 Identities=21% Similarity=0.313 Sum_probs=62.9
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQI 92 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 92 (98)
.++++|+|.+++.+ |+|.|+|.+.+.. ....+..+.+.+...+..+.+..........|+.+.|.|.+..|.|.+.+
T Consensus 71 ~~~~sL~I~~v~~~-D~G~Y~C~a~n~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i 147 (308)
T 4fom_A 71 LNDATITLHNIGFS-DSGKYICKAVTFP--LGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHI 147 (308)
T ss_dssp SSBCCEEECSCCGG-GCEEEEEEEEETT--TEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEE
T ss_pred CCceEEEEccCCHH-HCEEEEEEEeeCC--CcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceE
Confidence 35578999999999 9999999998852 34555566777776666555544344566678889999987778999999
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 148 ~W~~~ 152 (308)
T 4fom_A 148 DWEGD 152 (308)
T ss_dssp EECCC
T ss_pred EEEEC
Confidence 99864
No 43
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.43 E-value=9.5e-13 Score=80.19 Aligned_cols=83 Identities=20% Similarity=0.230 Sum_probs=54.2
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC-CCCCCEEe-CCCCceecCCCcEEEEEEcCCCCCC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT-PPQPPKIS-PGANPVATEGRAIELVCSTSGGSPD 89 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~-~~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~p~ 89 (98)
..+.++|+|.+++.+ |+|.|+|.+.+.. .........|.|.. ++..|.+. ..+...+.+|+.+.|.|.+.+..|.
T Consensus 75 ~~~~~sL~I~~v~~~-D~G~Y~C~~~~~~--~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~ 151 (227)
T 1mju_H 75 SSSTAYMQLSSLTSD-DSAVYYCANKLGW--FPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPE 151 (227)
T ss_dssp TTTEEEEEECSCCGG-GCEEEEEEEEETT--EEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSS
T ss_pred CCCeEEEEECCCCcc-cCEEEEEEECCCC--ceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCC
Confidence 457889999999999 9999999998841 11222345777764 33445542 1123356789999999999755576
Q ss_pred C-eEEEEec
Q psy5866 90 P-QISVTLQ 97 (98)
Q Consensus 90 ~-~~~W~~~ 97 (98)
+ .+.|+++
T Consensus 152 p~~v~W~~~ 160 (227)
T 1mju_H 152 PVTLTWNSG 160 (227)
T ss_dssp CCEEEEGGG
T ss_pred CeEEEEecC
Confidence 6 9999864
No 44
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.43 E-value=3.9e-13 Score=79.88 Aligned_cols=78 Identities=24% Similarity=0.449 Sum_probs=62.5
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVT 95 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~ 95 (98)
.+|.|.+++.+ |+|.|+|.+.+..+ ....+..+.|.|..+|..+.+. ....+.+|+.+.|.|.+..+.|.+.+.|+
T Consensus 68 ~~L~i~~~~~~-d~G~Y~C~~~~~~g-~~~~~~~~~l~V~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~~p~~~v~W~ 143 (209)
T 1nbq_A 68 TGITFKSVTRE-DTGTYTCMVSEEGG-NSYGEVKVKLIVLVPPSKPTVN--IPSSATIGNRAVLTCSEQDGSPPSEYTWF 143 (209)
T ss_dssp TEEECSCCCTT-SCSEEEEEEEETTS-SCEECCEEECCEEBCCCCCCCC--CBSEEETTSCEEECCCCCSCBSCCEEEEE
T ss_pred cEEEEeeCCHH-HCcEEEEEEecCCC-CccceEEEEEEEecCCcCCCcc--cccceecCCEEEEEEeCCCCCCCceeEEE
Confidence 56999999999 99999999998633 3345566788888777766553 34568899999999997568999999999
Q ss_pred ec
Q psy5866 96 LQ 97 (98)
Q Consensus 96 ~~ 97 (98)
++
T Consensus 144 ~~ 145 (209)
T 1nbq_A 144 KD 145 (209)
T ss_dssp ET
T ss_pred EC
Confidence 75
No 45
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.43 E-value=8.3e-13 Score=80.93 Aligned_cols=89 Identities=12% Similarity=0.140 Sum_probs=59.4
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC-----------CCEEeCCCCceecCC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ-----------PPKISPGANPVATEG 74 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~-----------~p~i~~~~~~~~~~g 74 (98)
|+.+....+.++|+|.+++.+ |+|.|+|.+.+... ........|.|..++. .+.+.......+.+|
T Consensus 66 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~n~~~--~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 142 (247)
T 1svz_A 66 RFSGSGSGTDFTLKISRVEAE-DLGIYYCFQGSHFP--PTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPG 142 (247)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSSSS--CEECCCEEEEEC---------------CCEEEECCCEEECTT
T ss_pred cEEeccCCCEEEEEECCCCHH-HCEEEEEEEccCCc--cEECCCEEEEEECCccccccccccccCceEEeCCCceeecCC
Confidence 344444456789999999999 99999999987421 1122345677765431 223433344579999
Q ss_pred CcEEEEEEcCCCC-CCCeEEEEec
Q psy5866 75 RAIELVCSTSGGS-PDPQISVTLQ 97 (98)
Q Consensus 75 ~~~~l~C~~~~~~-p~~~~~W~~~ 97 (98)
+.+.|.|.+.+.. +.+.+.|+++
T Consensus 143 ~~v~L~C~~~~~~~~~~~v~W~k~ 166 (247)
T 1svz_A 143 ETVKISCKATNYAFTDYSMHWVKQ 166 (247)
T ss_dssp CCEEEEEEEESSCGGGSCEEEEEE
T ss_pred CcEEEEEEEcCcccCCcEEEEEEe
Confidence 9999999986432 3578999985
No 46
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.42 E-value=1e-12 Score=79.92 Aligned_cols=85 Identities=18% Similarity=0.228 Sum_probs=56.4
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCC----Ce--eeEeeEEEEEEC-CCCCCEEe-CCCCceecCCCcEEEEEEc
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSG----QD--LHSQVYTVTVLT-PPQPPKIS-PGANPVATEGRAIELVCST 83 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~----~~--~~~~~~~l~v~~-~~~~p~i~-~~~~~~~~~g~~~~l~C~~ 83 (98)
..+.++|+|.+++.+ |+|.|+|.+.+..+. .. .......|.|.. ++.+|.+. ..+...+.+|+.+.|.|.+
T Consensus 76 ~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~ 154 (228)
T 3bae_H 76 SRDMVFMKITSVDTA-DTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLV 154 (228)
T ss_dssp TTTEEEEEECSCCGG-GCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEE
T ss_pred CCCeEEEEEcCCCcc-cCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEE
Confidence 456789999999999 999999999884210 01 122336777763 33455552 1123346789999999999
Q ss_pred CCCCCCC-eEEEEec
Q psy5866 84 SGGSPDP-QISVTLQ 97 (98)
Q Consensus 84 ~~~~p~~-~~~W~~~ 97 (98)
.+..|.+ .+.|+++
T Consensus 155 ~g~~P~p~~v~W~~~ 169 (228)
T 3bae_H 155 KGYFPEPVTLTWNSG 169 (228)
T ss_dssp EEEBSSCCEEEEGGG
T ss_pred ccEeCCCEEEEEeeC
Confidence 7555777 9999864
No 47
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.42 E-value=3e-12 Score=79.25 Aligned_cols=83 Identities=20% Similarity=0.124 Sum_probs=57.8
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCCC--CeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSG--QDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSP 88 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~--~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p 88 (98)
...+.++|+|.+++.+ |+|.|+|.+.+..+. .......+.|.|..++ ..........+.+|+++.|.|.+. +.|
T Consensus 74 ~~~~~~~L~I~~v~~~-DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~--~v~~~p~~~~v~~G~~v~L~C~~~-~~~ 149 (256)
T 1nqb_A 74 KPSSTAYMQLSSLTSE-DSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDI--ELTQTPLSLPVSLGDQASISCRSS-QSI 149 (256)
T ss_dssp TTTTEEEEEECSCCGG-GCEEEEEEECCTTSSSSCSEECCCEEEEECCCC--CEEEECSEEEECTTCCEEEEEEES-SCC
T ss_pred cCCCEEEEEECcCChh-hCEEEEEEEeeccCccceeEEcCceeeeecccc--cEEecCcEEEEecCCcEEEEeEec-Ccc
Confidence 3466789999999999 999999999985321 1122234567775332 222222445789999999999986 455
Q ss_pred C-----CeEEEEec
Q psy5866 89 D-----PQISVTLQ 97 (98)
Q Consensus 89 ~-----~~~~W~~~ 97 (98)
. +.+.|+++
T Consensus 150 ~~~~~~~~v~W~k~ 163 (256)
T 1nqb_A 150 VHSNGNTYLEWYLQ 163 (256)
T ss_dssp BCTTSCBCEEEEEE
T ss_pred cccccceEEEEEEE
Confidence 4 49999984
No 48
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.42 E-value=2.1e-12 Score=78.20 Aligned_cols=78 Identities=22% Similarity=0.356 Sum_probs=57.6
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCe
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQ 91 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 91 (98)
..++++|+|.+++.+ |+|.|+|.+.+. .......+.+.+..++..+. ....+.+|..+.+.|.+.++.|.|.
T Consensus 79 ~~~~~~L~I~~v~~~-D~G~Y~C~a~n~---~~~~~~~v~~~~~~~~~~~~----~~~~~~~g~~v~l~c~~~g~~P~p~ 150 (226)
T 4f80_A 79 TAGKAALRIHNVTAS-DSGKYLCYFQDG---DFYEKALVELKVAALGSDLH----VDVKGYKDGGIHLECRSTGWYPQPQ 150 (226)
T ss_dssp GGTEEEEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEEBCCCCCE----EEEEEEETTEEEEEEEEEEEBSCCE
T ss_pred cCCeEEEEEeeCchH-HCeeEEEEEECC---CcEEEEEEEEeeccceeccc----ceeeeccCCceeeEEEeccCCCCCE
Confidence 346789999999999 999999999984 44444445554443322222 2346778999999999976679999
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|++.
T Consensus 151 i~W~k~ 156 (226)
T 4f80_A 151 IQWSNN 156 (226)
T ss_dssp EEEECT
T ss_pred EEEEEC
Confidence 999873
No 49
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.42 E-value=8.1e-13 Score=79.18 Aligned_cols=89 Identities=18% Similarity=0.224 Sum_probs=59.6
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC-CCCEEeC-CCCceecCCCcEEEEEEc
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP-QPPKISP-GANPVATEGRAIELVCST 83 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~-~~p~i~~-~~~~~~~~g~~~~l~C~~ 83 (98)
|+......+.++|+|.+++.+ |+|.|+|.+.+... ........|.|...+ .+|.+.. .......+|+.+.|.|.+
T Consensus 63 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~--~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~ 139 (212)
T 1q0x_L 63 RFSGSLIGDKAALTITGAQTE-DEAIYFCALWSNNK--LVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTI 139 (212)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEEECSSC--EEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEE
T ss_pred cEEEEeeCCEEEEEECCCCcc-CCEEEEEEEecCch--hhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEE
Confidence 344333456789999999999 99999999998521 222334566664332 3455521 133345578899999999
Q ss_pred CCCCCCC-eEEEEec
Q psy5866 84 SGGSPDP-QISVTLQ 97 (98)
Q Consensus 84 ~~~~p~~-~~~W~~~ 97 (98)
.++.|++ .+.|+++
T Consensus 140 ~g~~p~~~~v~W~k~ 154 (212)
T 1q0x_L 140 TDFYPGVVTVDWKVD 154 (212)
T ss_dssp EEEBSSCCEEEEEET
T ss_pred EEEeCCCeEEEEEEC
Confidence 7555554 8999975
No 50
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.42 E-value=4.9e-13 Score=81.90 Aligned_cols=78 Identities=19% Similarity=0.381 Sum_probs=53.5
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCC-e
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDP-Q 91 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~-~ 91 (98)
.++++|+|.+++.+ |+|.|+|.+.+. .......+.|.|..+|.. .+. .......|..+.|.|.+.++.|.+ .
T Consensus 79 ~~~~sL~I~~v~~~-D~G~Y~C~~~~~---~~~~~~~~~L~V~~~P~v-~~~--~~~~~~~~~~~~L~C~~~g~~P~pi~ 151 (248)
T 3pv7_A 79 SGDASLRLPGIQLE-EAGEYRCEVVVT---PLKAQGTVQLEVVASPAS-RLL--LDQVGMKENEDKYMCESSGFYPEAIN 151 (248)
T ss_dssp TTBCCEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEEBCCEE-EEE--CC--------CEEEEEEEEEBSSCCE
T ss_pred CCcEEEEeCCCCHH-HCeEEEEEEEeC---CccceeEEEEEEecCCce-EEe--cCCccccCCCcEEEEEEccEECCCeE
Confidence 34567999999999 999999999984 445566778888765442 222 224455677888999997558888 9
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|+++
T Consensus 152 v~W~k~ 157 (248)
T 3pv7_A 152 ITWEKQ 157 (248)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 999975
No 51
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.42 E-value=1.8e-12 Score=77.16 Aligned_cols=80 Identities=18% Similarity=0.346 Sum_probs=59.7
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISV 94 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W 94 (98)
...|.|.+++.+ |+|.|+|.+.+...+....+..+.|.|...+..|.+...+...+.+|+.+.|.|.+. +. .+.+.|
T Consensus 57 ~~~L~i~~v~~~-D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~-~~-~~~v~W 133 (198)
T 1ugn_A 57 KGQFPIPSITWE-HTGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQ-VA-FDGFIL 133 (198)
T ss_dssp TTEEEESSCCGG-GCEEEEEEEEETTTEECCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEECS-SC-CSEEEE
T ss_pred ccEEEECCCCHH-HCeEEEEEEECCCCCcccCCccEEEEEcccccCCccccCCccccCCCCcEEEEEecC-CC-CcEEEE
Confidence 356999999999 999999999885311112345577888765556666433446889999999999986 44 689999
Q ss_pred Eec
Q psy5866 95 TLQ 97 (98)
Q Consensus 95 ~~~ 97 (98)
+++
T Consensus 134 ~k~ 136 (198)
T 1ugn_A 134 CKE 136 (198)
T ss_dssp EEC
T ss_pred EEC
Confidence 975
No 52
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.42 E-value=2.9e-12 Score=76.28 Aligned_cols=75 Identities=13% Similarity=0.219 Sum_probs=59.8
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEEe
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVTL 96 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~ 96 (98)
+|.|.+++.. |+|.|+|.+.+.. .......+.|.|..++..|.+...... +.+|+.+.|.|.+. +.| |.+.|++
T Consensus 72 ~L~i~~v~~~-D~G~Y~C~~~~~~--~~~~~~~~~l~V~~~~~~p~i~~~~~~-~~~g~~v~l~C~~~-~~p-p~i~W~~ 145 (208)
T 3r4d_A 72 SLLFQMITMK-DMGVYTLDMTDEN--YRRTQATVRFHVHQPVTQPFLQVTNTT-VKELDSVTLTCLSN-DIG-ANIQWLF 145 (208)
T ss_dssp CEEECSCCGG-GCEEEEEEEECSS--CEEEEEEEEEEEECCCCCCEEEESCSS-CCTTCCEEEEEECS-CTT-CEEEEEE
T ss_pred eEEEcccccc-CCeEEEEEEEccc--CceeEEEEEEEeccCCCCCEEecCCce-EeeCCCEEEEEECC-CCC-CceEEEE
Confidence 6999999999 9999999999852 245566678888877777777543333 88999999999986 455 7999997
Q ss_pred c
Q psy5866 97 Q 97 (98)
Q Consensus 97 ~ 97 (98)
+
T Consensus 146 ~ 146 (208)
T 3r4d_A 146 N 146 (208)
T ss_dssp T
T ss_pred C
Confidence 4
No 53
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.42 E-value=2.8e-12 Score=75.94 Aligned_cols=82 Identities=12% Similarity=0.237 Sum_probs=59.9
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCe
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQ 91 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 91 (98)
.....+|.|.+++.+ |+|.|+|.+.+... ....+..+.|.|.....+|.+...+...+.+|+.+.|.|.+. + +.+.
T Consensus 53 ~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~-~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~-~-~~~~ 128 (188)
T 1oll_A 53 RINKVKFYIPDMNSR-MAGQYSCIYRVGEL-WSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLD-T-ATSM 128 (188)
T ss_dssp TCCEEEEEESSCCGG-GCEEEEEEEEETTE-ECCCCCCEEEEEESCSCCCEEEEESCSEEETTCEEEEEEECS-S-SCSE
T ss_pred CcceeEEEeCcCCcc-cCeEEEEEecCCCC-CCCCCCceEEEecccCCCCeEEECCCCccccCCEEEEEEEcC-C-CCCE
Confidence 345678999999999 99999999987311 112345577888755556666433456789999999999975 3 4578
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|+++
T Consensus 129 ~~w~k~ 134 (188)
T 1oll_A 129 FLLLKE 134 (188)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 999875
No 54
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.42 E-value=5.7e-13 Score=79.80 Aligned_cols=89 Identities=11% Similarity=0.150 Sum_probs=60.4
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeC-CCCceecCCCcEEEEEEcC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISP-GANPVATEGRAIELVCSTS 84 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~-~~~~~~~~g~~~~l~C~~~ 84 (98)
++......+.++|+|.+++.+ |+|.|+|.+.+... ........|.|...+.+|.+.. .......+|+.+.|.|.+.
T Consensus 60 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~--~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~ 136 (210)
T 1lk3_L 60 RFSGSGSGTDFTLTIDPVEAD-DTAIYFCQQSWNGP--LTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMN 136 (210)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSSSS--CEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEE
T ss_pred cEEEEecCCEEEEEECCCCHH-HCeEEEEEEEcCCC--ceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEE
Confidence 344333456779999999999 99999999987522 1222234677765444555521 1333455899999999997
Q ss_pred CCCCCC-eEEEEec
Q psy5866 85 GGSPDP-QISVTLQ 97 (98)
Q Consensus 85 ~~~p~~-~~~W~~~ 97 (98)
++.|.+ .+.|+++
T Consensus 137 g~~p~~~~v~W~k~ 150 (210)
T 1lk3_L 137 NFYPRDISVKWKID 150 (210)
T ss_dssp EEBSSCCEEEEEET
T ss_pred eEeCCceEEEEEeC
Confidence 546654 8999975
No 55
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.42 E-value=4.5e-13 Score=80.27 Aligned_cols=89 Identities=12% Similarity=0.160 Sum_probs=61.0
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeC-CCCceecCCCcEEEEEEcC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISP-GANPVATEGRAIELVCSTS 84 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~-~~~~~~~~g~~~~l~C~~~ 84 (98)
++......+.++|+|.+++.+ |+|.|+|.+.+... ........|.|...+.+|.+.. .......+|+.+.|.|.+.
T Consensus 61 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~--~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~ 137 (213)
T 3d9a_L 61 RFSGSGSGTDFTLSINSVETE-DFGMYFCQQSNSWP--YTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLN 137 (213)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSSSS--CEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEE
T ss_pred cEEEEcCCCEEEEEECCCChh-hCEEEEEeeecCCc--ceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEe
Confidence 344433456779999999999 99999999987522 2222335677765544555421 2333455788999999997
Q ss_pred CCCCCC-eEEEEec
Q psy5866 85 GGSPDP-QISVTLQ 97 (98)
Q Consensus 85 ~~~p~~-~~~W~~~ 97 (98)
++.|.+ .+.|+++
T Consensus 138 g~~p~~~~v~W~k~ 151 (213)
T 3d9a_L 138 NFYPKDINVKWKID 151 (213)
T ss_dssp EEBSSCCEEEEEET
T ss_pred eecCCceEEEEEcC
Confidence 546665 8999975
No 56
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.42 E-value=3.7e-12 Score=79.02 Aligned_cols=79 Identities=24% Similarity=0.306 Sum_probs=61.4
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCe
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQ 91 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 91 (98)
..+...|.|.+++.+ |+|.|+|.+.+. ....+..+.|.|..+|... .......+.+|+.+.|.|.+. |.|.+.
T Consensus 151 ~~~~~~L~i~~~~~~-d~G~Y~C~a~n~---~g~~~~~~~l~V~~~p~~~--~~~~~~~~~~g~~v~l~C~~~-g~p~~~ 223 (284)
T 2rik_A 151 VESVAVLEMYNLSVE-DSGDYTCEAHNA---AGSASSSTSLKVKEPPVFR--KKPHPVETLKGADVHLECELQ-GTPPFQ 223 (284)
T ss_dssp ETTEEEEEECSCCGG-GCEEEEEEEECS---SCEEEEEEEEEEECCCBCC--SCCCCEEECTTCCEEEEEECB-SSSCCE
T ss_pred cCCEEEEEECCCCcc-cCEEEEEEEEcC---CCceeEEEEEEEecCCcce--eCCCcceecCCCeEEEEEEEE-ecCCCE
Confidence 345678999999999 999999999985 3455667788887655431 112346788999999999985 789999
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|+++
T Consensus 224 v~W~~~ 229 (284)
T 2rik_A 224 VSWHKD 229 (284)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 999975
No 57
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.41 E-value=3.7e-12 Score=75.12 Aligned_cols=75 Identities=19% Similarity=0.329 Sum_probs=59.3
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEE
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQIS 93 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~ 93 (98)
.+..|.|.+++.+ |+|.|+|.+.+. ...+..+.|.|..+|.. ........+.+|+.+.|.|.+. |.|.|.+.
T Consensus 54 ~~~~L~i~~~~~~-d~G~Y~C~~~n~----~~~~~~~~l~V~~~p~~--~~~~~~~~~~~g~~v~l~C~~~-g~p~p~i~ 125 (190)
T 2wv3_A 54 SNMEYRINKPRAE-DSGEYHCVYHFV----SAPKANATIEVKAAPDI--TGHKRSENKNEGQDAMMYCKSV-GYPHPEWM 125 (190)
T ss_dssp SEEEEEESSCCGG-GCEEEEEEEEET----TEEEEEEEEEEECCCEE--EEECSEEEEETTSCEEEEEEEE-CSSCCEEE
T ss_pred ccEEEEEecCCcc-cCEEEEEEEEeC----CcccccEEEEEecCCcc--cccCCcceeeCCCcEEEEEEeC-ccCCCceE
Confidence 4578999999999 999999999984 34556677888765432 2222456789999999999985 78999999
Q ss_pred EEe
Q psy5866 94 VTL 96 (98)
Q Consensus 94 W~~ 96 (98)
|++
T Consensus 126 W~~ 128 (190)
T 2wv3_A 126 WRK 128 (190)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 58
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.41 E-value=1.1e-13 Score=83.50 Aligned_cols=79 Identities=22% Similarity=0.284 Sum_probs=57.5
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcE-EEEEEcCCCCCCCe
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAI-ELVCSTSGGSPDPQ 91 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~-~l~C~~~~~~p~~~ 91 (98)
.++++|+|.+++.+ |+|.|+|.+.+... ...+..+.|.|..+|..+.... . .. .+|+.+ .|.|.+.++.|.|.
T Consensus 75 ~~~~sL~I~~v~~~-D~G~Y~C~~~~~~~--~~~~~~~~L~V~~~P~~~~~~~-~-~~-~~g~~~~~l~C~~~~g~P~p~ 148 (221)
T 3eow_R 75 LRDASLRMFGLRVE-DEGSYTCLFVTFPQ--GSRSVDIWLRVLAKPQNTAEVQ-K-VQ-LTGEPVPMARCVSTGGRPPAQ 148 (221)
T ss_dssp CCCCEEECCCSSCC-CCSCBEEEEEESSS--CSCEEECCCCCCCCCEEEEEEE-C-CC-CCSSSCCEEEEEEESCSSCCC
T ss_pred CCCceEEEccCChH-HCeEEEEEEEeCCC--CceEEEEEEEEEECCCceeecC-C-cc-cCCceEEEEEEECCCccCCCe
Confidence 35778999999999 99999999998531 3345556677765554332221 1 12 678888 59999877899999
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
++|+++
T Consensus 149 v~W~k~ 154 (221)
T 3eow_R 149 ITWHSD 154 (221)
T ss_dssp EEEECS
T ss_pred eEEEeC
Confidence 999864
No 59
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.41 E-value=1.1e-11 Score=73.29 Aligned_cols=77 Identities=19% Similarity=0.327 Sum_probs=58.2
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCC-eEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDP-QIS 93 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~ 93 (98)
..+|.|.+++.. |+|.|+|.+.+.. ....+..+.|.|..+|. .........+.+|+.+.|.|.+. |.|.| .+.
T Consensus 67 ~~~L~i~~~~~~-d~G~Y~C~~~~~~--~~~~~~~~~l~V~~~p~--~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~~v~ 140 (195)
T 2c5d_C 67 VSQLRITSLQLS-DTGQYQCLVFLGH--QTFVSQPGYVGLEGLPY--FLEEPEDRTVAANTPFNLSCQAQ-GPPEPVDLL 140 (195)
T ss_dssp EEEEEESSCCST-TCEEEEEEEEETT--EEEECCCEEEEECCSCE--EEECCCCEEECTTCCEEEEEEEE-CSSCCCEEE
T ss_pred ccEEEEEecccc-CCcEEEEEEEeCC--CceecccEEEEEecCCe--EEcCCCcEEEcCCCEEEEEeECC-CCCCCCEEE
Confidence 468999999999 9999999999852 12333447788865542 22223456888999999999985 77888 999
Q ss_pred EEec
Q psy5866 94 VTLQ 97 (98)
Q Consensus 94 W~~~ 97 (98)
|+++
T Consensus 141 W~~~ 144 (195)
T 2c5d_C 141 WLQD 144 (195)
T ss_dssp EEES
T ss_pred EEEC
Confidence 9975
No 60
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.41 E-value=4.1e-12 Score=74.73 Aligned_cols=79 Identities=20% Similarity=0.286 Sum_probs=61.0
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQI 92 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 92 (98)
.+..+|.|.+++.+ |+|.|+|.+.+..+ ...+..+.|.|..+|. .........+.+|+.+.|.|.+. +.|.|.+
T Consensus 59 ~~~~~L~i~~~~~~-d~G~Y~C~~~~~~~--~~~~~~~~l~v~~~p~--~~~~~~~~~~~~g~~~~l~C~~~-g~p~~~v 132 (191)
T 1epf_A 59 DDSSTLTIYNANID-DAGIYKCVVTAEDG--TQSEATVNVKIFQKLM--FKNAPTPQEFKEGEDAVIVCDVV-SSLPPTI 132 (191)
T ss_dssp TTEEEEEECSCCGG-GCEEEEEEEEETTT--EEEEEEEEEEEECCSE--EEECCSSEECCTTSCEEECCEEE-CSSCCEE
T ss_pred CCceEEEEccCCcc-cCEEEEEEEEcCCC--cceEEEEEEEeecCce--EecCCCcEeecCCCeEEEEEEEC-CCCCCEE
Confidence 45678999999999 99999999999532 4555667777764433 22223456788999999999986 7899999
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 133 ~W~~~ 137 (191)
T 1epf_A 133 IWKHK 137 (191)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99875
No 61
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.41 E-value=3.5e-12 Score=77.53 Aligned_cols=78 Identities=19% Similarity=0.331 Sum_probs=59.3
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEEe
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVTL 96 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~ 96 (98)
+|.|.+++.+ |+|.|+|.+.+..+ ....+..+.|.|...+.+|.+...+...+.+|+.+.|.|.+. +.|.+.+.|++
T Consensus 65 ~L~I~~v~~~-D~G~Y~C~a~n~~~-~~~~s~~~~l~V~~~~~~P~i~~~p~~~v~~G~~v~L~C~~~-~~~~~~~~W~k 141 (218)
T 1uct_A 65 EFVIDHMDAN-KAGRYQCQYRIGHY-RFRYSDTLELVVTGLYGKPFLSADRGLVLMPGENISLTCSSA-HIPFDRFSLAK 141 (218)
T ss_dssp EEEECSCCGG-GCEEEEEEEEETTT-EEEECCCEEEEEECSSCCCEEEESSCSEECTTCCCEEEEECS-SSCCSEEEEEE
T ss_pred EEEEcccccc-cCEEEEEEEEcCCC-ceeecCCEEEEEcCcccCCEEEeCCCCccCCCCCEEEEEeCC-CCCCCEEEEEE
Confidence 7999999999 99999999998521 123345577888765556666433456889999999999653 56778999997
Q ss_pred c
Q psy5866 97 Q 97 (98)
Q Consensus 97 ~ 97 (98)
+
T Consensus 142 ~ 142 (218)
T 1uct_A 142 E 142 (218)
T ss_dssp T
T ss_pred C
Confidence 5
No 62
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.41 E-value=3.2e-12 Score=78.80 Aligned_cols=85 Identities=18% Similarity=0.152 Sum_probs=59.6
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCC-CCeeeEeeEEEEEECCC-------------CCCEE-eCCCCceecCCC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGS-GQDLHSQVYTVTVLTPP-------------QPPKI-SPGANPVATEGR 75 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~-~~~~~~~~~~l~v~~~~-------------~~p~i-~~~~~~~~~~g~ 75 (98)
...+.++|+|.+++.+ |+|.|+|.+.+... ..........|.|...+ ..|.+ .......+.+|+
T Consensus 76 ~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~ 154 (256)
T 3umt_A 76 KSSSTAYLELRSLTSE-DSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGE 154 (256)
T ss_dssp GGGTEEEEEECSCCGG-GCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTC
T ss_pred cCCCEEEEEECCCCcc-cCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCC
Confidence 4456788999999999 99999999987411 11223344667776421 13333 222346889999
Q ss_pred cEEEEEEcCCCCCCCeEEEEec
Q psy5866 76 AIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 76 ~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
.+.|.|.+. +.|.+.+.|+++
T Consensus 155 ~v~L~C~~~-~~~~~~v~W~k~ 175 (256)
T 3umt_A 155 RVSITCRAS-QDIGSNLNWLQQ 175 (256)
T ss_dssp CEEEEEEES-SCCTTCEEEEEE
T ss_pred CEEEEEEEe-cCCCcEEEEEEE
Confidence 999999986 577789999985
No 63
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.41 E-value=1.2e-12 Score=80.26 Aligned_cols=88 Identities=16% Similarity=0.201 Sum_probs=58.9
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC-----------------CCCEEeCCCC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP-----------------QPPKISPGAN 68 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~-----------------~~p~i~~~~~ 68 (98)
|+......+.++|+|.+++.+ |+|.|+|.+.+... ........|.|..++ .++.+.....
T Consensus 64 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~n~~~--~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (250)
T 3esu_F 64 RFSGSGSGTDYSLTISNLEQE-DIGTYFCQQGNTLP--WTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGP 140 (250)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSSSS--CEECCCEEEEEC------------------------CEECCC
T ss_pred CEEEeCCCCEEEEEEccCChh-hCEEEEEEEeeCCC--ceECCCEEEEEECCCCcccccccccccccCcccceEEecCCc
Confidence 344444566779999999999 99999999987422 222333466665431 1223322355
Q ss_pred ceecCCCcEEEEEEcCCCCC--CCeEEEEec
Q psy5866 69 PVATEGRAIELVCSTSGGSP--DPQISVTLQ 97 (98)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~p--~~~~~W~~~ 97 (98)
..+.+|+.+.|.|.+. +.| .+.+.|+++
T Consensus 141 ~~v~~G~~v~L~C~~~-~~~~~~~~v~W~k~ 170 (250)
T 3esu_F 141 ELVKPGASVKISCKDS-GYAFSSSWMNWVKQ 170 (250)
T ss_dssp EEECTTCCEEEEEECC-STTGGGSEEEEEEE
T ss_pred eEEcCCceEEEEEEec-CCcccCCEEEEEEE
Confidence 6789999999999986 445 789999986
No 64
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.41 E-value=3.8e-12 Score=77.41 Aligned_cols=84 Identities=17% Similarity=0.185 Sum_probs=57.6
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCC--CeeeEeeEEEEEECCCCC---------CEE-eCCCCceecCCCcEEE
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSG--QDLHSQVYTVTVLTPPQP---------PKI-SPGANPVATEGRAIEL 79 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~--~~~~~~~~~l~v~~~~~~---------p~i-~~~~~~~~~~g~~~~l 79 (98)
..+.++|+|.+++.+ |+|.|+|.+.+..+. .........|.|...+.. +.+ .......+.+|+.+.|
T Consensus 69 ~~~~~~L~I~~v~~~-DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L 147 (238)
T 2p1y_A 69 SQENFSLILELATPS-QTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAIL 147 (238)
T ss_dssp SSSBCEEEESSCCGG-GCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEE
T ss_pred CCceEEEEEecCCcc-cCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEE
Confidence 345678999999999 999999999874221 112223456777654420 022 2224467899999999
Q ss_pred EEEcCCCCCCCeEEEEec
Q psy5866 80 VCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 80 ~C~~~~~~p~~~~~W~~~ 97 (98)
.|.+. +.|.+.+.|+++
T Consensus 148 ~C~~~-~~p~~~i~W~k~ 164 (238)
T 2p1y_A 148 NCSYE-NSAFDYFPWYQQ 164 (238)
T ss_dssp EEECC-CTTCCEEEEEEE
T ss_pred EEEEe-cCCCCcEEEEEE
Confidence 99985 678899999985
No 65
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.41 E-value=7.4e-13 Score=79.74 Aligned_cols=91 Identities=22% Similarity=0.223 Sum_probs=59.9
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCC-CeeeEeeEEEEEE-CCCCCCEEe-CCCCceecCCCcEEEEEE
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSG-QDLHSQVYTVTVL-TPPQPPKIS-PGANPVATEGRAIELVCS 82 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~-~~~~~~~~~l~v~-~~~~~p~i~-~~~~~~~~~g~~~~l~C~ 82 (98)
|+.+....+.++|+|.+++.+ |+|.|.|.+.+.... .........|.|. .++.+|.+. ..+...+.+|+.+.|.|.
T Consensus 65 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~ 143 (215)
T 3nl4_H 65 RFTISKTSTTVDLKITSPTTE-DTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCL 143 (215)
T ss_dssp TEEEEECSSEEEEEESSCCGG-GCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEE
T ss_pred CEEEEeeCCEEEEEECCCCcc-cCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEE
Confidence 444444667889999999999 999999999874210 0123344567776 334555553 223446678999999999
Q ss_pred cCCCCC-CCeEEEEec
Q psy5866 83 TSGGSP-DPQISVTLQ 97 (98)
Q Consensus 83 ~~~~~p-~~~~~W~~~ 97 (98)
+.++.| ...+.|+++
T Consensus 144 ~~~~~p~~~~v~W~~~ 159 (215)
T 3nl4_H 144 VKGYLPEPVTVTWNSG 159 (215)
T ss_dssp EEEEBSSCCEEEEGGG
T ss_pred EeeeeCCCeEEEEeeC
Confidence 975555 446889764
No 66
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.40 E-value=1.3e-11 Score=74.06 Aligned_cols=79 Identities=25% Similarity=0.308 Sum_probs=60.9
Q ss_pred CeEEEEEccce-eeccCeEEEEEEEECCCCCeeeEeeEEEEEECC----CCCCEEe-CCCCceecCCCcEEEEEEcCCCC
Q psy5866 14 GRYDLIISNAS-FERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP----PQPPKIS-PGANPVATEGRAIELVCSTSGGS 87 (98)
Q Consensus 14 ~~~~l~I~~v~-~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~----~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~ 87 (98)
....|.|.++. .. |+|.|+|.+.+. ....+..+.|.|..+ +..|.+. ......+.+|+.+.|.|.+. |.
T Consensus 61 ~~~~L~i~~v~~~~-d~G~Y~C~a~n~---~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~-g~ 135 (212)
T 2yd6_A 61 SGSVLRIQPLRTPR-DEAIYECVASNN---VGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAAS-GN 135 (212)
T ss_dssp TEEEEEECSCCTTT-TCEEEEEEEEET---TEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEE-CS
T ss_pred CceEEEEeccCCCC-CCeEEEEEEEcC---CCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEec-CC
Confidence 45679999994 99 999999999985 445566778888753 3345552 22445788899999999985 78
Q ss_pred CCCeEEEEec
Q psy5866 88 PDPQISVTLQ 97 (98)
Q Consensus 88 p~~~~~W~~~ 97 (98)
|.|.+.|+++
T Consensus 136 p~p~v~W~~~ 145 (212)
T 2yd6_A 136 PDPEITWFKD 145 (212)
T ss_dssp SCCEEEEEET
T ss_pred CCCeEEEEEC
Confidence 9999999975
No 67
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.40 E-value=1.2e-12 Score=80.32 Aligned_cols=88 Identities=13% Similarity=0.186 Sum_probs=58.8
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC-----------CCEEeCCCCceecCC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ-----------PPKISPGANPVATEG 74 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~-----------~p~i~~~~~~~~~~g 74 (98)
|+.+....+.++|+|.+++.+ |+|.|+|.+.+... ........|.|..++. +..+.......+.+|
T Consensus 61 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~n~~~--~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 137 (242)
T 2znx_A 61 RFSGSGSGTDFTLSINSVETE-DFGMYFCQQSNSXP--YTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPS 137 (242)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSSSS--CEECCCEEEEEC---------------CCEEEEECCSEECTT
T ss_pred CEEEecCCCEEEEEECCCChH-HCEEEEEeEecCCc--eEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCC
Confidence 344433456789999999999 99999999987521 1222345677765442 123322234578999
Q ss_pred CcEEEEEEcCCCCC--CCeEEEEec
Q psy5866 75 RAIELVCSTSGGSP--DPQISVTLQ 97 (98)
Q Consensus 75 ~~~~l~C~~~~~~p--~~~~~W~~~ 97 (98)
+++.|.|.+. +.| .+.+.|+++
T Consensus 138 ~~v~L~C~~~-g~~~~~~~v~W~k~ 161 (242)
T 2znx_A 138 QTLSLTCSVT-GDSITSDYXSXIRK 161 (242)
T ss_dssp SCEEEEEEEE-SSCGGGSCEEEEEE
T ss_pred CeEEEEEEEE-ccccCCcceeeEee
Confidence 9999999986 444 578999985
No 68
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.40 E-value=4.7e-12 Score=75.64 Aligned_cols=82 Identities=16% Similarity=0.284 Sum_probs=60.3
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCC--CeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSG--QDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDP 90 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~--~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~ 90 (98)
.....|.|.+++.+ |+|.|+|.+.+.... ....+..+.|.|...+.+|.+...+...+.+|+.++|.|.+. + +.+
T Consensus 60 ~~~~~l~I~~v~~~-D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~-~-~~~ 136 (201)
T 1nkr_A 60 VSKANFSISRMTQD-LAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPGPTVLAGENVTLSCSSR-S-SYD 136 (201)
T ss_dssp EEEEEEEESSCCGG-GCEEEEEEEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESCSEECTTCEEEEEEEES-S-CCS
T ss_pred CceEEEEeccCCcc-cCeEEEEeEecCCCCccccCCCCCEEEEeeccCCCCceecCCCCccCCCCeEEEEEeCC-C-CCc
Confidence 34567999999999 999999999864211 122345577888766666776332345789999999999986 3 568
Q ss_pred eEEEEec
Q psy5866 91 QISVTLQ 97 (98)
Q Consensus 91 ~~~W~~~ 97 (98)
.+.|+++
T Consensus 137 ~~~w~k~ 143 (201)
T 1nkr_A 137 MYHLSRE 143 (201)
T ss_dssp EEEEEET
T ss_pred eEEEEEC
Confidence 8999875
No 69
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.40 E-value=1.7e-12 Score=79.06 Aligned_cols=88 Identities=14% Similarity=0.212 Sum_probs=61.3
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC----CCEEeCCCCceecCCCcEEEEE
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ----PPKISPGANPVATEGRAIELVC 81 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~----~p~i~~~~~~~~~~g~~~~l~C 81 (98)
|+.+....+.++|+|.+++.+ |+|.|+|.+.+... ........|.|..++. ...+.......+.+|+.+.|.|
T Consensus 65 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~n~~~--~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C 141 (240)
T 1moe_A 65 RFSGTGSRTDFTLIIDPVEAD-DVATYYCQQTNEDP--YTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSC 141 (240)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSSSS--CCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEE
T ss_pred cEEEEecCCeEEEEEcCCChh-hCEEEEEEEccCCc--eeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEE
Confidence 333333456778999999999 99999999988522 1233446777765432 2233333556889999999999
Q ss_pred EcCCCCC--CCeEEEEec
Q psy5866 82 STSGGSP--DPQISVTLQ 97 (98)
Q Consensus 82 ~~~~~~p--~~~~~W~~~ 97 (98)
.+. +.| .+.+.|+++
T Consensus 142 ~~~-g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 142 TAS-GFNIKDTYMHWVKQ 158 (240)
T ss_dssp EEE-SSCGGGSCEEEEEE
T ss_pred EEc-CccCCCCEEEEEEE
Confidence 986 444 468999985
No 70
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.40 E-value=2.4e-12 Score=81.65 Aligned_cols=82 Identities=20% Similarity=0.270 Sum_probs=63.0
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCC--eeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQ--DLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDP 90 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~--~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~ 90 (98)
.+..+|+|.+++.+ |+|.|+|.+.+..+.. ...+..+.|.|..+|..|.+.. +...+.+|+.+.|.|.+. +.|++
T Consensus 71 ~~~~~L~I~~v~~~-D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~-~~~~~~~g~~~~l~C~~~-g~p~~ 147 (327)
T 2wng_A 71 NMDFSISISNITPA-DAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSG-PAARATPQHTVSFTCESH-GFSPR 147 (327)
T ss_dssp CCBCCEEECSCCGG-GCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEEC-CSSCBCTTCEEEEEEEEE-EEBSS
T ss_pred CceeEEEEccCccc-cCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeec-cccccCCCCEEEEEEEEe-CccCC
Confidence 45667999999999 9999999999863321 1223457888888888888863 456789999999999997 44444
Q ss_pred --eEEEEec
Q psy5866 91 --QISVTLQ 97 (98)
Q Consensus 91 --~~~W~~~ 97 (98)
.+.|+++
T Consensus 148 ~~~v~W~k~ 156 (327)
T 2wng_A 148 DITLKWFKN 156 (327)
T ss_dssp CCEEEEEET
T ss_pred CcEEEEEEC
Confidence 8999975
No 71
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.40 E-value=3e-12 Score=78.79 Aligned_cols=87 Identities=20% Similarity=0.142 Sum_probs=60.1
Q ss_pred EEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC------------CCCCEE-eCCCCceecC
Q psy5866 7 IDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP------------PQPPKI-SPGANPVATE 73 (98)
Q Consensus 7 ~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~------------~~~p~i-~~~~~~~~~~ 73 (98)
+..+...+.++|+|.+++.+ |+|.|+|.+.+.. .........|.|... ...+.+ .......+.+
T Consensus 71 ~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~~--~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~ 147 (253)
T 3uzq_A 71 ITADTSSNTAYLHLSSLTSG-DTAVYYCSRGWEG--FAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSL 147 (253)
T ss_dssp EEEETTTTEEEEEECSCCGG-GCEEEEEEECSSS--CCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECT
T ss_pred EEeecCCCeEEEEeCCCCcc-cCEEEEEEEeeCC--ccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeC
Confidence 33445567889999999999 9999999998742 122234456777632 112233 2223468999
Q ss_pred CCcEEEEEEcCCCCCCC----eEEEEec
Q psy5866 74 GRAIELVCSTSGGSPDP----QISVTLQ 97 (98)
Q Consensus 74 g~~~~l~C~~~~~~p~~----~~~W~~~ 97 (98)
|+++.|.|.+. +.|.+ .+.|+++
T Consensus 148 G~~v~L~C~~~-~~~~~~~~~~v~W~r~ 174 (253)
T 3uzq_A 148 GQRATISCRAS-ENVDRYGNSFMHWYQQ 174 (253)
T ss_dssp TSCEEEEEEES-SCCEETTEECEEEEEE
T ss_pred CCCEEEEEEec-CccccCCCcEEEEEEE
Confidence 99999999986 56665 8999985
No 72
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.40 E-value=1e-12 Score=81.18 Aligned_cols=87 Identities=22% Similarity=0.292 Sum_probs=57.4
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECCCC-CeeeEeeEEEEEE-CCCCCCEEe-CCCCceecCCCcEEEEEEcCCC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAGSG-QDLHSQVYTVTVL-TPPQPPKIS-PGANPVATEGRAIELVCSTSGG 86 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~-~~~~~~~~~l~v~-~~~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~ 86 (98)
+...+.++|+|.+++.+ |+|.|+|.+.+.... .........|.|. ..+..|.+. ......+.+|+.+.|.|.+.++
T Consensus 73 ~~~~~~~sL~I~~v~~~-DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~ 151 (253)
T 3liz_H 73 DNAKNTLFLQMSSLKSE-DTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGY 151 (253)
T ss_dssp EGGGTEEEEEECSCCGG-GCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEE
T ss_pred eCCCCEEEEEECCCChh-hCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeE
Confidence 34467889999999999 999999999874211 1222334577776 444556553 2233456679999999999765
Q ss_pred CCCC-eEEEEec
Q psy5866 87 SPDP-QISVTLQ 97 (98)
Q Consensus 87 ~p~~-~~~W~~~ 97 (98)
.|.+ .+.|+++
T Consensus 152 ~P~~~~v~W~~~ 163 (253)
T 3liz_H 152 FPEPVTVTWNSG 163 (253)
T ss_dssp BSSCCEEEEGGG
T ss_pred eCCCeEEEEEeC
Confidence 7766 8999864
No 73
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.40 E-value=7.7e-13 Score=84.72 Aligned_cols=83 Identities=18% Similarity=0.180 Sum_probs=59.9
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE-CCCCCCEEe-CCCCceecCCCcEEEEEEcCCCCC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL-TPPQPPKIS-PGANPVATEGRAIELVCSTSGGSP 88 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~-~~~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~p 88 (98)
...+.++|+|.+++.+ |+|.|+|.+.+. .........|.|. .++.+|.+. ..+...+.+|+.+.|.|.+.++.|
T Consensus 74 ~~~~~~~L~I~~v~~~-D~G~Y~C~~~n~---~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P 149 (344)
T 1za6_B 74 TSASTAYVELSSLRSE-DTAVYFCTRSLN---MAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 149 (344)
T ss_dssp TTTTEEEEEECSCCGG-GCEEEEEEETTT---TCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBS
T ss_pred cCCCEEEEEECCCCcc-cCEEEEEEEecC---cceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEEC
Confidence 3456789999999999 999999999873 2233344678886 344555552 123345689999999999975556
Q ss_pred C-CeEEEEec
Q psy5866 89 D-PQISVTLQ 97 (98)
Q Consensus 89 ~-~~~~W~~~ 97 (98)
. +.+.|+++
T Consensus 150 ~~~~v~W~k~ 159 (344)
T 1za6_B 150 EPVTVSWNSG 159 (344)
T ss_dssp SCCCEEETTT
T ss_pred CCeEEEEecC
Confidence 5 79999864
No 74
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.39 E-value=1.2e-11 Score=83.96 Aligned_cols=87 Identities=16% Similarity=0.261 Sum_probs=64.8
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEe-CCCCceecCCCcEEEEEEcC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKIS-PGANPVATEGRAIELVCSTS 84 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~-~~~~~~~~~g~~~~l~C~~~ 84 (98)
++.+....+..+|.|.+++.+ |+|.|+|.+.|. .+.......+.|...+.+|.+. ...+....+|+.+.|.|.+.
T Consensus 51 ~~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~a~N~---~g~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~ 126 (570)
T 3b43_A 51 AYKMQFKNNVASLVINKVDHS-DVGEYTCKAENS---VGAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECRIN 126 (570)
T ss_dssp SEEEECCTTEEEEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEECCCCCCCEESSCCCCEEEETTSCEEEEEEEE
T ss_pred CEEEEEECCEEEEEEccCChh-hCEEEEEEEEeC---CceEEEEEEEEECCCCCCCcccccCCCeEecCCCeEEEEEEEc
Confidence 344455566788999999999 999999999985 3444445566665444455552 22456678899999999986
Q ss_pred CCCCCCeEEEEec
Q psy5866 85 GGSPDPQISVTLQ 97 (98)
Q Consensus 85 ~~~p~~~~~W~~~ 97 (98)
|.|.+.+.|+++
T Consensus 127 -g~p~~~v~W~k~ 138 (570)
T 3b43_A 127 -GSEPLQVSWYKD 138 (570)
T ss_dssp -SSSSCEEEEEET
T ss_pred -cCCCCEEEEEEC
Confidence 788899999985
No 75
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.39 E-value=6.4e-12 Score=73.45 Aligned_cols=77 Identities=21% Similarity=0.261 Sum_probs=59.1
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCC-eEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDP-QIS 93 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~ 93 (98)
..+|.|.+++.+ |+|.|+|.+.+.. ....+..+.|.|..+|. .........+.+|+.+.|.|.+. +.|.| .+.
T Consensus 59 ~~~L~i~~~~~~-d~G~Y~C~~~~~~--~~~~~~~~~l~V~~~p~--~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~~v~ 132 (182)
T 1rhf_A 59 IGFLSLKSVERS-DAGRYWCQVEDGG--ETEISQPVWLTVEGVPF--FTVEPKDLAVPPNAPFQLSCEAV-GPPEPVTIV 132 (182)
T ss_dssp EEEEEESSCCGG-GCEEEEEEESSCT--TCEECCCEEEEEECSCE--EEECCCCEEECTTCCEEEEEEEE-CSSSCCEEE
T ss_pred eEEEEEeecCcc-cCeEEEEEEEcCC--CcEEEEEEEEEEecCCe--EEecCcceEecCCCEEEEEeEec-CCCCCCEEE
Confidence 568999999999 9999999998742 23345567788875543 22223456789999999999986 78888 999
Q ss_pred EEec
Q psy5866 94 VTLQ 97 (98)
Q Consensus 94 W~~~ 97 (98)
|+++
T Consensus 133 W~~~ 136 (182)
T 1rhf_A 133 WWRG 136 (182)
T ss_dssp EEET
T ss_pred EEcC
Confidence 9975
No 76
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.39 E-value=9.1e-13 Score=77.62 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=61.1
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCE-EeCCCCceecCCCcEEEEEEcC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPK-ISPGANPVATEGRAIELVCSTS 84 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~-i~~~~~~~~~~g~~~~l~C~~~ 84 (98)
++......+..+|+|.+++.+ |+|.|+|.+.+. .......+.+.|..+|.... ........+.+|+.+.|.|.+.
T Consensus 53 ~~~~~~~~~~~~L~i~~~~~~-d~G~Y~C~~~n~---~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~ 128 (197)
T 3lcy_A 53 KYKMSSDGRTHTLTVMTEEQE-DEGVYTCIATNE---VGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYI 128 (197)
T ss_dssp SEEEEESSSEEEEEEECCSGG-GCEEEEEEEECS---SCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEE
T ss_pred cEEEEeCCCEEEEEEecCCcc-CCEEEEEEEECC---CCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEe
Confidence 334444556678999999999 999999999974 34445556666654332111 0111334678899999999985
Q ss_pred CCCCCCeEEEEec
Q psy5866 85 GGSPDPQISVTLQ 97 (98)
Q Consensus 85 ~~~p~~~~~W~~~ 97 (98)
+.|.|.+.|+++
T Consensus 129 -~~p~p~v~W~~~ 140 (197)
T 3lcy_A 129 -GRPVPAMTWFHG 140 (197)
T ss_dssp -EESCCEEEEEET
T ss_pred -eeeCCeeEEeEC
Confidence 789999999875
No 77
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.39 E-value=6.9e-12 Score=73.86 Aligned_cols=71 Identities=18% Similarity=0.299 Sum_probs=54.3
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEEe
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVTL 96 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~ 96 (98)
+|+|.+++.+ |+|.|+|.+.+..+ ....+..+.|.|..++..|.+.. .+..+.|.|.+. |.|.|.+.|++
T Consensus 62 sL~I~~v~~~-D~G~Y~C~~~n~~g-~~~~~~~~~l~V~~~~~~p~i~~-------~~~~v~L~C~~~-g~p~p~i~W~~ 131 (176)
T 1hng_A 62 DLKIKNLTRD-DSGTYNVTVYSTNG-TRILNKALDLRILEMVSKPMIYW-------ECSNATLTCEVL-EGTDVELKLYQ 131 (176)
T ss_dssp CEEESSCCGG-GCEEEEEEEEETTC-CEEEEEEEEEEEECCCCCCEEEE-------ETTTTEEEEECS-SCSSCEEEEEE
T ss_pred cEEEcccccc-cCEEEEEEEEeCCC-CEEEEEEEEEEEeCCCCCCEEEe-------cCCcEEEEEEec-CCCCcEEEEEE
Confidence 4999999999 99999999998632 22245667888887766666632 133489999986 67789999997
Q ss_pred c
Q psy5866 97 Q 97 (98)
Q Consensus 97 ~ 97 (98)
+
T Consensus 132 ~ 132 (176)
T 1hng_A 132 G 132 (176)
T ss_dssp T
T ss_pred C
Confidence 5
No 78
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.38 E-value=3.4e-12 Score=79.42 Aligned_cols=89 Identities=13% Similarity=0.124 Sum_probs=60.5
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC-----------------CCEEeCCCC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ-----------------PPKISPGAN 68 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~-----------------~p~i~~~~~ 68 (98)
|+.+....+.++|+|.+++.+ |+|.|+|.+.+... ........|.|..++. .+.+...+.
T Consensus 71 R~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~~~--~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (264)
T 2gjj_A 71 RFTGSGSGTDFTLTIGSVKAE-DLAVYYCQQYSNYP--WTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGP 147 (264)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSSSS--CEECCCEEEEEECC-------------------CCEEEECCC
T ss_pred cEEEecCCCEEEEEECCCCHH-HCEEEEEEEecCCc--cEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCC
Confidence 344433456789999999999 99999999987421 1223345778876531 223332244
Q ss_pred ceecCCCcEEEEEEcCCCCC-CCeEEEEec
Q psy5866 69 PVATEGRAIELVCSTSGGSP-DPQISVTLQ 97 (98)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~ 97 (98)
..+.+|+++.|.|.+.+..+ .+.+.|+++
T Consensus 148 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 177 (264)
T 2gjj_A 148 EVVKTGASVKISCKASGYSFTGYFINWVKK 177 (264)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred EEEcCCCcEEEEEEEeCCccCCeEEEEEEE
Confidence 57899999999999864332 378999986
No 79
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.38 E-value=1.9e-12 Score=80.72 Aligned_cols=85 Identities=22% Similarity=0.263 Sum_probs=57.0
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC-CCCCCEEe-CCCCceecCCCcEEEEEEcCCCCCC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT-PPQPPKIS-PGANPVATEGRAIELVCSTSGGSPD 89 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~-~~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~p~ 89 (98)
..+.++|+|.+++.+ |+|.|+|.+.+.............|.|.. ++.+|.+. ..+...+.+|+.+.|.|.+.+..|.
T Consensus 81 ~~~~~sL~I~~v~~~-DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~ 159 (261)
T 2xqy_G 81 SSSTVYIQLSSLTSE-DSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPE 159 (261)
T ss_dssp GGTEEEEEECSCCGG-GCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSS
T ss_pred CCCEEEEEEcCCCcc-cCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCC
Confidence 356789999999999 99999999987421011222345777764 23445442 1123346789999999999755676
Q ss_pred C-eEEEEec
Q psy5866 90 P-QISVTLQ 97 (98)
Q Consensus 90 ~-~~~W~~~ 97 (98)
+ .+.|+++
T Consensus 160 ~i~v~W~k~ 168 (261)
T 2xqy_G 160 PVTLTWNSG 168 (261)
T ss_dssp CCEEEEGGG
T ss_pred CCEEEEecC
Confidence 6 9999864
No 80
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.38 E-value=1.4e-12 Score=81.48 Aligned_cols=89 Identities=17% Similarity=0.160 Sum_probs=58.9
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC------------CCEEeCCCCceecC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ------------PPKISPGANPVATE 73 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~------------~p~i~~~~~~~~~~ 73 (98)
|+.+....+.++|+|.+++.+ |+|.|+|.+.+... ........|.|..++. ...+.......+.+
T Consensus 72 r~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~n~~~--~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~ 148 (276)
T 3auv_A 72 RFSGSGSGTDFTLTISSLQPE-DFATYYCQQHYTTP--PTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQP 148 (276)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSSSS--CCCCCCEEEEC-----------------CCEEEEECCEEECT
T ss_pred CEEEeccCCeEEEEEccCChh-hCEEEEEEEecCCc--ccccCCEEEEEecCCCccccccccccCcceEEECCCceEecC
Confidence 444444566789999999999 99999999987521 1122235666654432 12332224578999
Q ss_pred CCcEEEEEEcCCCCC-CCeEEEEec
Q psy5866 74 GRAIELVCSTSGGSP-DPQISVTLQ 97 (98)
Q Consensus 74 g~~~~l~C~~~~~~p-~~~~~W~~~ 97 (98)
|+.+.|.|.+.+..| .+.+.|+++
T Consensus 149 G~~v~L~C~~~g~~~~~~~v~W~k~ 173 (276)
T 3auv_A 149 GGSLRLSCAASGFTISDYWIHWVRQ 173 (276)
T ss_dssp TCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred CCeEEEEEEecCccCCCCEEEEEEc
Confidence 999999999864333 589999985
No 81
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.38 E-value=2.8e-12 Score=78.11 Aligned_cols=88 Identities=20% Similarity=0.211 Sum_probs=55.7
Q ss_pred EeCCCCeEEEEEccceeeccCeEEEEEEEECCCC-----CeeeEeeEEEEEE-CCCCCCEEe-CCCCceecCCCcEEEEE
Q psy5866 9 YRPDSGRYDLIISNASFERDNGKFECRLKAAGSG-----QDLHSQVYTVTVL-TPPQPPKIS-PGANPVATEGRAIELVC 81 (98)
Q Consensus 9 ~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~-----~~~~~~~~~l~v~-~~~~~p~i~-~~~~~~~~~g~~~~l~C 81 (98)
.+...+.++|+|.+++.+ |+|.|.|.+.+.... .........|.|. ..+..|.+. ..+...+..|+.+.|.|
T Consensus 76 ~~~~~~~~sL~I~~v~~~-DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C 154 (232)
T 3qhz_H 76 KDTSKSQVVLTMTNMDPV-DTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGC 154 (232)
T ss_dssp EETTTTEEEEEECSCCGG-GCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEE
T ss_pred eccCCCEEEEEECcCChh-hCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEE
Confidence 344568899999999999 999999999864110 0223344567776 344556553 22344566799999999
Q ss_pred EcCCCCC-CCeEEEEec
Q psy5866 82 STSGGSP-DPQISVTLQ 97 (98)
Q Consensus 82 ~~~~~~p-~~~~~W~~~ 97 (98)
.+.++.| ...+.|+++
T Consensus 155 ~~~~~~P~~~~v~W~~~ 171 (232)
T 3qhz_H 155 LVKDYFPEPVTVSWNSG 171 (232)
T ss_dssp EEEEEBSSCCEEEEGGG
T ss_pred EEeeEeCCCeEEEEEEC
Confidence 9976566 346889764
No 82
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.38 E-value=4e-12 Score=77.70 Aligned_cols=85 Identities=18% Similarity=0.283 Sum_probs=55.3
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCC-C--CeeeEeeEEEEEEC-CCCCCEEeC-CCCceecCC-CcEEEEEEcC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGS-G--QDLHSQVYTVTVLT-PPQPPKISP-GANPVATEG-RAIELVCSTS 84 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~-~--~~~~~~~~~l~v~~-~~~~p~i~~-~~~~~~~~g-~~~~l~C~~~ 84 (98)
...+.++|+|.+++.+ |+|.|.|.+.+.+. + .........|.|.. ++.+|.+.. .+...+.+| +.+.|.|.+.
T Consensus 73 ~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~ 151 (232)
T 1dn0_B 73 TSKNQFSLKLSSVTAA-DTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQ 151 (232)
T ss_dssp TTTTEEEEEECSCCGG-GCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEE
T ss_pred CCCCEEEEEECCCCcc-cCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEE
Confidence 3567889999999999 99999999984211 0 11222345788875 344555521 122345578 8999999998
Q ss_pred CCCCCC-eEEEEe
Q psy5866 85 GGSPDP-QISVTL 96 (98)
Q Consensus 85 ~~~p~~-~~~W~~ 96 (98)
+..|.+ .+.|++
T Consensus 152 g~~P~p~~v~W~~ 164 (232)
T 1dn0_B 152 DFLPDSITFSWKY 164 (232)
T ss_dssp EEBSSCCEEEEEE
T ss_pred EEeCCCeEEEEEc
Confidence 666876 999998
No 83
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.38 E-value=7.3e-12 Score=74.51 Aligned_cols=71 Identities=15% Similarity=0.324 Sum_probs=53.9
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEEe
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVTL 96 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~ 96 (98)
+|+|.+++.+ |+|.|+|.+.+..+ .......+.|.|+.+...|.+.. .+..+.|+|.+. +.|.+++.|++
T Consensus 67 sL~I~~v~~~-DsG~Y~c~~~n~~g-~~~~~~~~~L~V~~~~~~P~i~~-------~~~~v~L~C~~~-~~p~~~~~W~~ 136 (182)
T 1hnf_A 67 TLKIKHLKTD-DQDIYKVSIYDTKG-KNVLEKIFDLKIQERVSKPKISW-------TCINTTLTCEVM-NGTDPELNLYQ 136 (182)
T ss_dssp CEEECSCCGG-GCEEEEEEEEETTS-CEEEEEEEEEEEECCCCCCEEEE-------ETTTTEEEEECS-SCSSCEEEEEE
T ss_pred CEEECCCChh-hCEEEEEEEEeCCC-ceeEEEEEEEEEcCcCCCCEEEE-------ccCcEEEEeEcc-CCCCCEEEEEE
Confidence 7999999999 99999999998532 23334567888887766676632 123589999986 56789999997
Q ss_pred c
Q psy5866 97 Q 97 (98)
Q Consensus 97 ~ 97 (98)
+
T Consensus 137 ~ 137 (182)
T 1hnf_A 137 D 137 (182)
T ss_dssp S
T ss_pred C
Confidence 5
No 84
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.38 E-value=1.1e-11 Score=76.54 Aligned_cols=85 Identities=18% Similarity=0.249 Sum_probs=59.0
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECCCCC-eeeEeeEEEEEEC-----------------CCCCCEE-eCCCCce
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAGSGQ-DLHSQVYTVTVLT-----------------PPQPPKI-SPGANPV 70 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~-~~~~~~~~l~v~~-----------------~~~~p~i-~~~~~~~ 70 (98)
+...+.++|+|.+++.+ |+|.|+|.+.+..... ........|.|.. .+.+|.+ .......
T Consensus 70 ~~~~~~~sL~I~~v~~~-DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~ 148 (256)
T 3tf7_C 70 SKSDSSFHLRKASVHRS-DSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKV 148 (256)
T ss_dssp ETTTTEEEEEESSCCGG-GCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEE
T ss_pred cCCCCEEEEEECCCCcc-cCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEE
Confidence 55677889999999999 9999999998853211 2233345677764 1223333 3324456
Q ss_pred ecCCCcEEEEEEcCCCCCCCeEEEEec
Q psy5866 71 ATEGRAIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 71 ~~~g~~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
+.+|+.++|.|.+.. . .+.+.|+++
T Consensus 149 v~~G~~v~L~C~~~~-~-~~~v~W~k~ 173 (256)
T 3tf7_C 149 TVTGENVTLSCRQTN-S-HNYMYWYRQ 173 (256)
T ss_dssp EETTCCEEECEEECS-C-CSEEEEEEE
T ss_pred EeCCCcEEEEEEcCC-C-ceEEEEEEE
Confidence 779999999999864 4 678999984
No 85
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.37 E-value=5.7e-12 Score=77.31 Aligned_cols=84 Identities=17% Similarity=0.135 Sum_probs=57.7
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCC----eeeEeeEEEEEECCCC------CCEEeCCCCceecCCCcEEEEEE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQ----DLHSQVYTVTVLTPPQ------PPKISPGANPVATEGRAIELVCS 82 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~----~~~~~~~~l~v~~~~~------~p~i~~~~~~~~~~g~~~~l~C~ 82 (98)
.+.++|+|.+++.+ |+|.|.|.+.+...+. ........|.|...+. .+.+.......+.+|+.+.|.|.
T Consensus 77 ~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~ 155 (242)
T 1hxm_B 77 TSTSTLTIHNVEKQ-DIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCL 155 (242)
T ss_dssp TTEEEEEECSCCGG-GCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEE
T ss_pred CcEEEEEECCCCcc-cCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEE
Confidence 36889999999999 9999999998742101 1122346788875321 22332222345667999999999
Q ss_pred cCCCCCC-CeEEEEec
Q psy5866 83 TSGGSPD-PQISVTLQ 97 (98)
Q Consensus 83 ~~~~~p~-~~~~W~~~ 97 (98)
+.+..|. +.+.|+++
T Consensus 156 ~~g~~P~~~~v~W~~~ 171 (242)
T 1hxm_B 156 LEKFFPDVIKIHWEEK 171 (242)
T ss_dssp EEEESSCCEEEEEEES
T ss_pred EeeEECCCeEEEEEcC
Confidence 9755575 79999975
No 86
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.37 E-value=7.3e-12 Score=84.62 Aligned_cols=80 Identities=19% Similarity=0.288 Sum_probs=62.1
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCe
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQ 91 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 91 (98)
..+.++|+|.+++.+ |+|.|+|.+.+.. ...+..+.|.|..+|.. ........+.+|+.+.|.|.+.++.|.+.
T Consensus 71 ~~g~~~L~I~~v~~~-D~G~Y~C~~~n~~---~~~~~~~~l~V~~~p~~--~~~~~~~~v~~G~~v~l~C~~~~~~~~~~ 144 (585)
T 2ocw_A 71 ENGTFVVNIAQLSQD-DSGRYKCGLGINS---RGLSFDVSLEVSQGPGL--LNDTKVYTVDLGRTVTINCPFKTENAQKR 144 (585)
T ss_pred CCCEEEEEECCCCcc-cCEEEEEEcccCC---CCceEEEEEEEecCccc--cCCCccEEEEcCCCEEEEEEecCCCCCcc
Confidence 567789999999999 9999999998753 23455678888766543 22234567899999999999976666788
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|+++
T Consensus 145 v~W~k~ 150 (585)
T 2ocw_A 145 KSLYKQ 150 (585)
T ss_pred EEEEEC
Confidence 999975
No 87
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.37 E-value=8.7e-12 Score=74.72 Aligned_cols=82 Identities=23% Similarity=0.314 Sum_probs=61.7
Q ss_pred CCCeEEEEEcccee-eccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC----CCEE-eCCCCceecCCCcEEEEEEcCC
Q psy5866 12 DSGRYDLIISNASF-ERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ----PPKI-SPGANPVATEGRAIELVCSTSG 85 (98)
Q Consensus 12 ~~~~~~l~I~~v~~-~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~----~p~i-~~~~~~~~~~g~~~~l~C~~~~ 85 (98)
..+...|.|.+++. . |+|.|+|.+.+..+ ...+..+.|.|..++. .|.+ .......+.+|+.+.|.|.+.
T Consensus 60 ~~~~~~L~i~~v~~~~-d~G~Y~C~~~n~~g--~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~- 135 (212)
T 2yd1_A 60 PGGISILRIEPVRAGR-DDAPYECVAENGVG--DAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAI- 135 (212)
T ss_dssp TTTEEEEEESSCCTTT-TCSEEEEEEECSSS--CEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEE-
T ss_pred CCCeEEEEEEecCCCC-cCceEEEEEEeCCC--CeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEec-
Confidence 35557899999999 9 99999999988522 2256667888875432 2444 222446788899999999985
Q ss_pred CCCCCeEEEEec
Q psy5866 86 GSPDPQISVTLQ 97 (98)
Q Consensus 86 ~~p~~~~~W~~~ 97 (98)
+.|.+.+.|+++
T Consensus 136 g~p~p~i~W~~~ 147 (212)
T 2yd1_A 136 GNPTPNIYWIKN 147 (212)
T ss_dssp CSSCCEEEEEET
T ss_pred cCCCCeEEEEEC
Confidence 789999999975
No 88
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.37 E-value=2.2e-12 Score=78.73 Aligned_cols=85 Identities=21% Similarity=0.292 Sum_probs=58.5
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC---CCCCCEE--eCCCCceecCCCcEEEEEEcCCC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT---PPQPPKI--SPGANPVATEGRAIELVCSTSGG 86 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~---~~~~p~i--~~~~~~~~~~g~~~~l~C~~~~~ 86 (98)
..+.++|+|.+++.+ |+|.|+|.+...............+.|.. .+.+|.+ .......+.+|+.+.|.|.+.++
T Consensus 71 ~~~~~sL~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~ 149 (240)
T 3q5y_A 71 DDYHSEMNMSALELE-DSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGF 149 (240)
T ss_dssp TTSCEEEEECSCCGG-GCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEE
T ss_pred CCCEEEEEECcCChh-HCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeE
Confidence 456789999999999 99999999984222123334445677764 2344544 22223356678999999999765
Q ss_pred CCCC-eEEEEec
Q psy5866 87 SPDP-QISVTLQ 97 (98)
Q Consensus 87 ~p~~-~~~W~~~ 97 (98)
.|.+ .+.|+++
T Consensus 150 ~P~~~~v~W~~~ 161 (240)
T 3q5y_A 150 FPDHVELSWWVN 161 (240)
T ss_dssp BSSCEEEEEEET
T ss_pred ECCCeEEEEEEC
Confidence 7766 7999875
No 89
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.37 E-value=4.5e-12 Score=75.30 Aligned_cols=81 Identities=15% Similarity=0.334 Sum_probs=60.7
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQI 92 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 92 (98)
....+|.|.+++.+ |+|.|+|.+.+..+ ....+..+.|.|...+.+|.+...+...+.+|+.++|.|.+. + +.+.+
T Consensus 55 ~~~~~L~i~~v~~~-D~G~Y~C~a~n~~g-~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~-~-~~~~~ 130 (196)
T 3p2t_A 55 KNKARFSIPSMTED-YAGRYRCYYRSPVG-WSQPSDPLELVMTGAYSKPTLSALPSPLVTSGKSVTLLCQSR-S-PMDTF 130 (196)
T ss_dssp SSEEEEEESSCCGG-GCEEEEEEEEETTE-EBCCCCCEEEEEECSSCCCEEEEESCSEECTTCCEEEEEEEE-E-EEEEE
T ss_pred CceEEEEeccCCcc-cCceEEEEEeCCCc-ccCCCccEEEEecCCCCCCEEEeCCcceecCCCeEEEEEecC-C-CCCEE
Confidence 45678999999999 99999999998521 123455677888766666766433445788999999999985 3 45689
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 131 ~w~k~ 135 (196)
T 3p2t_A 131 LLCKE 135 (196)
T ss_dssp EEEET
T ss_pred EEEeC
Confidence 99875
No 90
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.37 E-value=1.6e-12 Score=77.51 Aligned_cols=87 Identities=18% Similarity=0.263 Sum_probs=60.0
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC------------------CCCCCEEeC-C
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT------------------PPQPPKISP-G 66 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~------------------~~~~p~i~~-~ 66 (98)
++......+...|+|.+++.+ |+|.|+|.+.+. .......+.+.|.. .+.++.+.. .
T Consensus 49 ~~~~~~~~~~~~L~i~~v~~~-D~G~Y~C~~~n~---~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 124 (212)
T 2r15_A 49 RVKTGVTGEQIWLQINEPTPN-DKGKYVMELFDG---KTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLP 124 (212)
T ss_dssp SEEEEEETTEEEEEEESCCGG-GCEEEEEEEECS---SCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCC
T ss_pred eEEEEEeCCEEEEEECCCCcc-cCEEEEEEEecC---CcceEEEEEEEEeeccchhhhccccCcccccccCCCcccccCC
Confidence 344444455677999999999 999999999984 33444444444321 112233322 2
Q ss_pred CCceecCCCcEEEEEEcCCCCCCCeEEEEec
Q psy5866 67 ANPVATEGRAIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 67 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
....+.+|+.+.|.|.+. |.|.|.+.|+++
T Consensus 125 ~~~~v~~g~~~~l~C~~~-g~p~p~v~W~~~ 154 (212)
T 2r15_A 125 DVVTIQEGKALNLTCNVW-GDPPPEVSWLKN 154 (212)
T ss_dssp SEEEEETTCCEEEEEEEE-CSSCCEEEEEET
T ss_pred CcEEEccCCeEEEEEEEc-CCCCceEEEEEC
Confidence 345788999999999986 789999999975
No 91
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.36 E-value=2.3e-12 Score=77.84 Aligned_cols=85 Identities=15% Similarity=0.199 Sum_probs=58.7
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE-CCCCCCEEe-CCCCceecCCCcEEEEEEcCCCC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL-TPPQPPKIS-PGANPVATEGRAIELVCSTSGGS 87 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~-~~~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~ 87 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+... .........|.|. .++..|.+. ..+... .+|+.+.|.|.+.++.
T Consensus 75 ~~~~~~~sL~I~~v~~~-DsG~Y~C~~~~~~~-~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~-~~g~~v~L~C~~~~~~ 151 (221)
T 3m8o_H 75 DDSKNTAFLQMNSLKSD-DTAMYYCVIRGDVY-NRQWGQGTLVTVSSASPTSPKVFPLSLCST-QPDGNVVIACLVQGFF 151 (221)
T ss_dssp EGGGTEEEEEECSCCGG-GCEEEEEEEESCTT-CCCBBCCEEEEECSCCCBCCEEEEEECCSC-CCTTEEEEEEEEEEEB
T ss_pred cCCCCEEEEEECCCCHH-HCEEEEEEEECCCh-hheECCCEEEEEecCCCCCCeEEEecCccc-ccCCCEEEEEEEEeeE
Confidence 34467889999999999 99999999987421 0223334567776 334455553 112223 7899999999997657
Q ss_pred CC--CeEEEEec
Q psy5866 88 PD--PQISVTLQ 97 (98)
Q Consensus 88 p~--~~~~W~~~ 97 (98)
|. +.+.|+++
T Consensus 152 P~~~~~v~W~~~ 163 (221)
T 3m8o_H 152 PQEPLSVTWSES 163 (221)
T ss_dssp SSCSEEEEESCC
T ss_pred CCCCEEEEEEEC
Confidence 76 48999864
No 92
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.36 E-value=2.4e-12 Score=76.04 Aligned_cols=81 Identities=22% Similarity=0.304 Sum_probs=59.7
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCC--C-EEeCCCCceecCCCcEEEEEEcCCCCC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQP--P-KISPGANPVATEGRAIELVCSTSGGSP 88 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~--p-~i~~~~~~~~~~g~~~~l~C~~~~~~p 88 (98)
..+...|.|.+++.+ |+|.|+|.+.+. ....+..+.|.|..+|.. | .+.......+.+|+.+.|.|.+. +.|
T Consensus 58 ~~~~~~L~i~~~~~~-d~G~Y~C~~~n~---~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-g~p 132 (197)
T 2j8h_A 58 KGGYHQLIIASVTDD-DATVYQVRATNQ---GGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFS-GKP 132 (197)
T ss_dssp TTTEEEEEECSCCGG-GCSEEEEEEEET---TEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEE-EES
T ss_pred CCCEEEEEECcCCHH-hCEEEEEEEEEC---CCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEE-ecC
Confidence 456678999999999 999999999985 344566677777643321 1 11111234678899999999986 789
Q ss_pred CCeEEEEec
Q psy5866 89 DPQISVTLQ 97 (98)
Q Consensus 89 ~~~~~W~~~ 97 (98)
.|.+.|+++
T Consensus 133 ~p~i~W~~~ 141 (197)
T 2j8h_A 133 DPVITWQKG 141 (197)
T ss_dssp CCEEEEEES
T ss_pred CCcEEEEEC
Confidence 999999975
No 93
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.36 E-value=9.9e-13 Score=80.94 Aligned_cols=89 Identities=13% Similarity=0.137 Sum_probs=60.3
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeC-CCCceecCCCcEEEEEEcC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISP-GANPVATEGRAIELVCSTS 84 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~-~~~~~~~~g~~~~l~C~~~ 84 (98)
|+......+.++|+|.+++.+ |+|.|+|.+.+... ........|.|.....+|.+.. .....+.+|+.+.|.|.+.
T Consensus 99 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~--~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~ 175 (252)
T 3bkj_L 99 RFSGSGSGTDFTLRISRVEAE-DLGVYYCFQASLVP--LTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLN 175 (252)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSBSS--CEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEE
T ss_pred ceEEEccCCEEEEEECCCCcc-cCEEEEEEEEcCCc--cEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEe
Confidence 344444456779999999999 99999999987421 1222335677765444555521 1233445788999999997
Q ss_pred CCCCCC-eEEEEec
Q psy5866 85 GGSPDP-QISVTLQ 97 (98)
Q Consensus 85 ~~~p~~-~~~W~~~ 97 (98)
++.|.+ .+.|+++
T Consensus 176 g~~p~~~~v~W~k~ 189 (252)
T 3bkj_L 176 NFYPKDINVKWKID 189 (252)
T ss_dssp EEBSSCCEEEEEET
T ss_pred eEeCCCcEEEEEEC
Confidence 556654 7999975
No 94
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.36 E-value=5e-12 Score=74.64 Aligned_cols=79 Identities=18% Similarity=0.261 Sum_probs=57.7
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISV 94 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W 94 (98)
...|.|.+++.+ |+|.|+|.+.+..+ ....+..+.|.|.....+|.+...+...+.+|+.+.|.|.+. +. .+.+.|
T Consensus 51 ~~~L~i~~v~~~-D~G~Y~C~a~n~~g-~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~l~C~~~-~~-~~~~~w 126 (184)
T 2gi7_A 51 QAVLFIPAMKRS-LAGRYRCSYQNGSL-WSLPSDQLELVATGVFAKPSLSAQPGPAVSSGGDVTLQCQTR-YG-FDQFAL 126 (184)
T ss_dssp SSEEEESSCCGG-GCEEEEEEEEETTE-EBCCCCCEEEEEESSSCCCEEEEECCCSSCCTTCEEEEEECS-SC-CCEEEE
T ss_pred ccEEEECcCChh-hCceEEEEEEcCCC-ccCCCCCEEEEecCcCCCCEEEeCCCceecCCCcEEEEEEcC-CC-CcEEEE
Confidence 457999999999 99999999998421 112344567777665556666332456788999999999975 43 469999
Q ss_pred Eec
Q psy5866 95 TLQ 97 (98)
Q Consensus 95 ~~~ 97 (98)
+++
T Consensus 127 ~k~ 129 (184)
T 2gi7_A 127 YKE 129 (184)
T ss_dssp EEC
T ss_pred EEC
Confidence 975
No 95
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.36 E-value=7e-12 Score=75.70 Aligned_cols=84 Identities=15% Similarity=0.217 Sum_probs=56.2
Q ss_pred EEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC------------------CCCCCEEeCCCC
Q psy5866 7 IDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT------------------PPQPPKISPGAN 68 (98)
Q Consensus 7 ~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~------------------~~~~p~i~~~~~ 68 (98)
+..+...+..+|.|.+++.+ |+|.|+|.+.|. ... ....+.+.. ...+|.+.....
T Consensus 52 ~~~~~~~g~~~L~I~~v~~~-D~G~Y~C~a~Ng---~a~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~ 125 (207)
T 3rbs_A 52 MHIDRNTGIIEMFMEKLQDE-DEGTYTFQLQDG---KAT--NHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLS 125 (207)
T ss_dssp EEECTTTCEEEEEESCCCGG-GCEEEEEEEEET---TEE--EEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEE
T ss_pred EEEeCCCCEEEEEECCCChh-hCEEEEEEEECC---CeE--EEEEEEEEccchhhhcccccccccccccCCCCceEecCC
Confidence 34444457788999999999 999999999982 222 222222110 001343321123
Q ss_pred ceecCCCcEEEEEEcCCCC-CCCeEEEEec
Q psy5866 69 PVATEGRAIELVCSTSGGS-PDPQISVTLQ 97 (98)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~-p~~~~~W~~~ 97 (98)
..+.+|+.+.|.|.+. |. |.|.+.|+++
T Consensus 126 ~~v~~g~~v~l~C~v~-g~~P~p~i~W~k~ 154 (207)
T 3rbs_A 126 WEVTGECNVLLKCKVA-NIKKETHIVWYKD 154 (207)
T ss_dssp EEEETTTEEEEEEEEE-SCCTTCEEEEEET
T ss_pred cEEcCCCcEEEEEEEe-CCCCCCEEEEEEC
Confidence 5788999999999986 56 8999999985
No 96
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.35 E-value=6.2e-13 Score=80.66 Aligned_cols=91 Identities=18% Similarity=0.194 Sum_probs=57.9
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC-CCCEEeC-CCCceecCCCcEEEEEEc
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP-QPPKISP-GANPVATEGRAIELVCST 83 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~-~~p~i~~-~~~~~~~~g~~~~l~C~~ 83 (98)
|+......+.++|+|.+++.+ |+|.|+|.+.+.............|.|...+ .+|.+.. .......+|+.+.|.|.+
T Consensus 81 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~ 159 (234)
T 2j6e_L 81 RFSGSKSGTSASLAISGLRSE-DEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLI 159 (234)
T ss_dssp TEEEEEETTEEEEEEESCCST-TCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECC
T ss_pred cEEEEecCCeEEEEECCCCHH-HCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEE
Confidence 344333456779999999999 9999999999863210122223456663322 2333311 122344568899999999
Q ss_pred CCCCCC-CeEEEEec
Q psy5866 84 SGGSPD-PQISVTLQ 97 (98)
Q Consensus 84 ~~~~p~-~~~~W~~~ 97 (98)
.++.|+ +.+.|+++
T Consensus 160 ~g~~p~~~~v~W~k~ 174 (234)
T 2j6e_L 160 SDFFPGAVTVAWKAD 174 (234)
T ss_dssp CBCSSCCCEEEEEET
T ss_pred EEEcCCceEEEEEEC
Confidence 755565 48999975
No 97
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.35 E-value=7.8e-12 Score=73.39 Aligned_cols=75 Identities=24% Similarity=0.398 Sum_probs=57.3
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISV 94 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W 94 (98)
..+|+|.+++.. |+|.|+|.+.+. .......+.|.|..+|. +.......+.+|+.+.|.|.+. +.|.+.+.|
T Consensus 57 ~~~L~i~~~~~~-d~G~Y~C~~~~~---~~~~~~~~~l~V~~~p~---~~~~~~~~~~~g~~v~l~C~~~-~~p~~~v~W 128 (192)
T 2va4_A 57 NTELTVRNIINS-DGGPYVCRATNK---AGEDEKQAFLQVFVQPH---IIQLKNETTYENGQVTLVCDAE-GEPIPEITW 128 (192)
T ss_dssp TTEEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEEEEEE---EEEECCEEECTTSEEEEEEEEE-EESCCEEEE
T ss_pred eeEEEEecCChh-cCcEEEEEEEcc---ccccceEEEEEEEccCc---ccccCcceEEeCCeEEEEEEec-CCCCCcEEE
Confidence 347999999999 999999999985 44455666777764443 2112345677899999999985 789999999
Q ss_pred Eec
Q psy5866 95 TLQ 97 (98)
Q Consensus 95 ~~~ 97 (98)
+++
T Consensus 129 ~~~ 131 (192)
T 2va4_A 129 KRA 131 (192)
T ss_dssp EET
T ss_pred EeC
Confidence 875
No 98
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.34 E-value=5.2e-12 Score=74.22 Aligned_cols=69 Identities=19% Similarity=0.208 Sum_probs=52.6
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISV 94 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W 94 (98)
+.+|+|.+++.+ |+|.|+|.+.+.. . ...+.|.|+.++..|.+...... ..|.|.+. +.|.|.+.|
T Consensus 59 ~~sL~I~~v~~~-DsG~Y~C~~~n~~---~--~~~~~L~V~~~~~~p~i~~~~~~-------~~L~C~~~-~~p~p~i~W 124 (171)
T 1ccz_A 59 SGSLTIYNLTSS-DEDEYEMESPNIT---D--TMKFFLYVLEMVSKPMIYWECSN-------ATLTCEVL-EGTDVELKL 124 (171)
T ss_dssp TCCEEECSCCGG-GCEEEEEECTTCC---S--CEEEEEEEECCCCCCEEEEETTT-------TEEEEECS-SCSSCEEEE
T ss_pred CCeEEECCCChh-hCceEEEEEeCCC---C--cEEEEEEEECcCCCCEEEEecCC-------cEEEEEeC-CCCCcEEEE
Confidence 347999999999 9999999997642 2 56678899888777776321111 27999986 568899999
Q ss_pred Eec
Q psy5866 95 TLQ 97 (98)
Q Consensus 95 ~~~ 97 (98)
+++
T Consensus 125 ~~~ 127 (171)
T 1ccz_A 125 YQG 127 (171)
T ss_dssp EET
T ss_pred EEC
Confidence 975
No 99
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.34 E-value=1.3e-11 Score=82.55 Aligned_cols=92 Identities=17% Similarity=0.177 Sum_probs=62.0
Q ss_pred eEEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC-CCCCEEe-CCCCceecCCCcEEEEEE
Q psy5866 5 EIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP-PQPPKIS-PGANPVATEGRAIELVCS 82 (98)
Q Consensus 5 ~~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~-~~~p~i~-~~~~~~~~~g~~~~l~C~ 82 (98)
.|+......+.++|+|.+++.+ |+|.|+|.+.+..+........+.|.|... ..+|.+. ......+.+|+.+.|.|.
T Consensus 59 ~r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~ 137 (523)
T 2rcj_C 59 TRFSGSKSGTSASLAISGLEAE-DESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCL 137 (523)
T ss_pred CcEEEecCCCEEEEEECCCChh-hCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEE
Confidence 3555555567789999999999 999999999985322212334467777533 2334431 123345678999999999
Q ss_pred cCCCCCC-CeEEEEec
Q psy5866 83 TSGGSPD-PQISVTLQ 97 (98)
Q Consensus 83 ~~~~~p~-~~~~W~~~ 97 (98)
+.+..|+ +.+.|+++
T Consensus 138 ~~g~~p~~~~v~W~k~ 153 (523)
T 2rcj_C 138 ISDFYPGAVTVAWKAD 153 (523)
T ss_pred eccccCCceEEEEecC
Confidence 9754443 48999975
No 100
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.33 E-value=2.8e-12 Score=79.50 Aligned_cols=90 Identities=20% Similarity=0.247 Sum_probs=60.5
Q ss_pred EEEEeC-CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC---CCCCCEE--eCCCCceecCCCcEEE
Q psy5866 6 IIDYRP-DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT---PPQPPKI--SPGANPVATEGRAIEL 79 (98)
Q Consensus 6 ~~~~~~-~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~---~~~~p~i--~~~~~~~~~~g~~~~l 79 (98)
|+.+.. ..++++|+|.+++.+ |+|.|+|.+.+... .........|.|.. .+.+|.+ .......+.+|+.+.|
T Consensus 89 R~~~~~~~~~~~sL~I~~v~~~-D~G~Y~C~~~~~~~-~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L 166 (268)
T 3pl6_D 89 RFFAVRPEGSVSTLKIQRTERG-DSAVYLCATSALGD-TQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATL 166 (268)
T ss_dssp TEEEECTTSSSEEEEECSCCGG-GCEEEEEEEESSSS-SCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEE
T ss_pred cEEEEecCCCEEEEEECCCCcc-cCEEEEEEEecCCC-ceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEE
Confidence 444332 456789999999999 99999999986311 23334445677765 2234443 2223345667999999
Q ss_pred EEEcCCCCCCC-eEEEEec
Q psy5866 80 VCSTSGGSPDP-QISVTLQ 97 (98)
Q Consensus 80 ~C~~~~~~p~~-~~~W~~~ 97 (98)
.|.+.+..|++ .+.|+++
T Consensus 167 ~C~~~g~~p~~~~v~W~~~ 185 (268)
T 3pl6_D 167 VCLATGFYPDHVELSWWVN 185 (268)
T ss_dssp EEEEEEEBSSCEEEEEEES
T ss_pred EEEECcccCCCeEEEEEEC
Confidence 99997555555 8999975
No 101
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.33 E-value=5.3e-12 Score=77.24 Aligned_cols=84 Identities=20% Similarity=0.318 Sum_probs=57.8
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCC--CeeeEeeEEEEEECC---CCCCEE--eCCCCceecCCCcEEEEEEcCC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSG--QDLHSQVYTVTVLTP---PQPPKI--SPGANPVATEGRAIELVCSTSG 85 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~--~~~~~~~~~l~v~~~---~~~p~i--~~~~~~~~~~g~~~~l~C~~~~ 85 (98)
.+.++|+|.+++.+ |+|.|+|.+.+..+. .........|.|... +.+|.+ .......+.+|+.+.|.|.+.+
T Consensus 69 ~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g 147 (238)
T 1bec_A 69 QEQFSLILELATPS-QTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARG 147 (238)
T ss_dssp SSEEEEEESSCCGG-GCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEE
T ss_pred CCEEEEEEecCCcc-cCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEee
Confidence 56789999999999 999999999874210 112223356777653 234544 2223345668999999999975
Q ss_pred CCCCC-eEEEEec
Q psy5866 86 GSPDP-QISVTLQ 97 (98)
Q Consensus 86 ~~p~~-~~~W~~~ 97 (98)
..|.+ .+.|+++
T Consensus 148 ~~P~~~~v~W~~~ 160 (238)
T 1bec_A 148 FFPDHVELSWWVN 160 (238)
T ss_dssp EBSCCEEEEEEET
T ss_pred EeCCCcEEEEEEC
Confidence 55754 8999975
No 102
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.33 E-value=2.9e-12 Score=78.68 Aligned_cols=89 Identities=13% Similarity=0.136 Sum_probs=58.9
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeC-CCCceecCCCcEEEEEEcC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISP-GANPVATEGRAIELVCSTS 84 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~-~~~~~~~~g~~~~l~C~~~ 84 (98)
|+......+.++|+|.+++.+ |+|.|+|.+.+... ........+.|.....+|.+.. .......+|..+.|.|.+.
T Consensus 103 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~a~n~~~--~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~ 179 (254)
T 2c1o_A 103 RFTGSGSGTDFTLKISRVEAE-DLGIYYCVQGSHFP--PTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLN 179 (254)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCSEEEEEECSSSS--CEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEE
T ss_pred eEEEecCCCEEEEEECcCCcc-cCEEEEEEEEcCcc--eEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEe
Confidence 344333456779999999999 99999999987421 1222234667765444555521 1233345678999999997
Q ss_pred CCCCC-CeEEEEec
Q psy5866 85 GGSPD-PQISVTLQ 97 (98)
Q Consensus 85 ~~~p~-~~~~W~~~ 97 (98)
+..|+ +.+.|+++
T Consensus 180 g~~p~~~~v~W~k~ 193 (254)
T 2c1o_A 180 NFYPKDINVKWKID 193 (254)
T ss_dssp EEBSSCCEEEEEES
T ss_pred cccCCCcEEEEEEC
Confidence 54555 57999975
No 103
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.33 E-value=9.7e-12 Score=78.59 Aligned_cols=83 Identities=18% Similarity=0.281 Sum_probs=61.4
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCC---CcEEEEEEcCCCCC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEG---RAIELVCSTSGGSP 88 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g---~~~~l~C~~~~~~p 88 (98)
..++.+|.|.+++.+ |+|.|+|.+.+.. ....+..+.|.|..+|............+.+| +.+.|.|.+..+.|
T Consensus 88 ~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~--~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p 164 (331)
T 3u83_A 88 SFTDGTIRLSRLELE-DEGVYICEFATFP--TGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKP 164 (331)
T ss_dssp SSSBCCEEECSCCGG-GCEEEEEEEEEET--TEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBS
T ss_pred CCCCceEEEcccCcc-cCcEEEEEEEecC--CCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcC
Confidence 345667999999999 9999999965431 34566677888887665433333355677888 77999998446889
Q ss_pred CCeEEEEec
Q psy5866 89 DPQISVTLQ 97 (98)
Q Consensus 89 ~~~~~W~~~ 97 (98)
.+.+.|+++
T Consensus 165 ~~~i~W~~~ 173 (331)
T 3u83_A 165 PSVVSWETR 173 (331)
T ss_dssp CCEEEEEES
T ss_pred CceEEEEcC
Confidence 999999973
No 104
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.33 E-value=6.2e-12 Score=81.56 Aligned_cols=76 Identities=18% Similarity=0.234 Sum_probs=59.9
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISV 94 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W 94 (98)
...|.|.+++.+ |+|.|+|.+.|. .+.......|.|..+|. .+.......+.+|+.+.|.|.+. |.|.|.+.|
T Consensus 257 ~~~L~I~~v~~~-D~G~Y~C~a~N~---~G~~~~~~~l~v~~~P~--~~~~~~~~~v~~g~~v~l~C~~~-g~P~p~i~W 329 (384)
T 3kld_A 257 NGILEIPNFQQE-DAGSYECVAENS---RGKNVAKGQLTFYAQPN--WVQIINDIHVAMEESVFWECKAN-GRPKPTYRW 329 (384)
T ss_dssp SCEEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEEEEEE--EEECCCCEEECTTCCEEEECEEE-EESCCEEEE
T ss_pred CcEEEECCCChh-hCEEEEEEEEcC---CCeEEEEEEEEEecCCc--cccCCCceEecCCCCEEEEeECC-ccCCCeEEE
Confidence 346999999999 999999999995 45556667787765443 22223457889999999999985 789999999
Q ss_pred Eec
Q psy5866 95 TLQ 97 (98)
Q Consensus 95 ~~~ 97 (98)
+++
T Consensus 330 ~k~ 332 (384)
T 3kld_A 330 LKN 332 (384)
T ss_dssp EET
T ss_pred EEC
Confidence 975
No 105
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.32 E-value=2.6e-12 Score=80.03 Aligned_cols=86 Identities=22% Similarity=0.254 Sum_probs=51.8
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCCC---------C-eeeEeeEEEEEEC-CCCCCEEeC-CCCceecCCCcEE
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSG---------Q-DLHSQVYTVTVLT-PPQPPKISP-GANPVATEGRAIE 78 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~---------~-~~~~~~~~l~v~~-~~~~p~i~~-~~~~~~~~g~~~~ 78 (98)
...+.++|+|.+++.+ |+|.|.|.+.+..+. . ........|.|.. ++.+|.+.. .+...+.+|..+.
T Consensus 74 ~~~~~~sL~I~~v~~~-DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~ 152 (257)
T 3bn9_D 74 NSKNTLYLQMSSLRAE-DTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAA 152 (257)
T ss_dssp TTTTEEEEEEESCCGG-GCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------
T ss_pred CCCCEEEEEECCCChh-hCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEE
Confidence 3467889999999999 999999999874210 0 0222335777765 334566532 1223467899999
Q ss_pred EEEEcCCCCCCC-eEEEEec
Q psy5866 79 LVCSTSGGSPDP-QISVTLQ 97 (98)
Q Consensus 79 l~C~~~~~~p~~-~~~W~~~ 97 (98)
|.|.+.+..|.+ .+.|+++
T Consensus 153 L~C~~~g~~P~pi~v~W~k~ 172 (257)
T 3bn9_D 153 LGCLVKDYFPEPVTVSWNSG 172 (257)
T ss_dssp CCCEEEEEBSSCCEEEETTT
T ss_pred EEEEEeeEECCCcEEEEeeC
Confidence 999998656777 9999864
No 106
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.32 E-value=4.4e-11 Score=81.16 Aligned_cols=80 Identities=15% Similarity=0.202 Sum_probs=62.4
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEe-CCCCceecCCCcEEEEEEcCCCCCCCe
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKIS-PGANPVATEGRAIELVCSTSGGSPDPQ 91 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~p~~~ 91 (98)
.+..+|.|.++..+ |+|.|+|.+.+. .........+.|.....+|.+. ......+.+|+.+.|.|.+. |.|.+.
T Consensus 154 ~~~~~L~i~~~~~~-d~G~Y~C~a~n~---~g~~~~~~~l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~C~~~-g~p~p~ 228 (570)
T 3b43_A 154 HNVATLQILQTDQS-HVGQYNCSASNP---LGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVT-GTAPIK 228 (570)
T ss_dssp TTEEEEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEECCCCCCEEEECCCCBCCBSBSCEEEEEEEE-SSSCCE
T ss_pred CCEEEEEECcCChH-HCEEEEEEEEeC---CcEEEEEEEEEEcCCCCCCccccCCceeEecCCCeEEEEEEEE-ECCCCE
Confidence 34578999999999 999999999985 4455556677776555556552 22456788999999999986 788899
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|+++
T Consensus 229 i~W~k~ 234 (570)
T 3b43_A 229 ITWAKD 234 (570)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 999975
No 107
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.32 E-value=1.1e-11 Score=83.96 Aligned_cols=77 Identities=25% Similarity=0.399 Sum_probs=59.6
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcE-EEEEEcCCCCCCCeEEEE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAI-ELVCSTSGGSPDPQISVT 95 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~-~l~C~~~~~~p~~~~~W~ 95 (98)
+|.|.+++.+ |+|.|+|.+.+..+ ......+.|.|..+|..|.+.... ..+.++... .|+|.+.++.|.|.++|+
T Consensus 433 ~L~i~~v~~~-D~G~Y~C~~~n~~~--~~~~~~~~l~V~~~~~~p~i~~~~-~~~~~~~~~~~l~C~~~~~~P~~~i~W~ 508 (581)
T 3o3u_N 433 SLFLPAVGIQ-DEGIFRCQAMNRNG--KETKSNYRVRVYQIPGKPEIVDSA-SELTAGVPNKVGTCVSEGSYPAGTLSWH 508 (581)
T ss_dssp CEEESSCCGG-GCEEEEEEEECTTS--CEEEEEEEEEEEBCCCCCEEESCC-SEECTTSCEEEEEEEEEEEBSCCEEEEE
T ss_pred eEEEeccccc-cCeEEEEEEEcCCC--ceeEEEEEEEEEcCCCCCEEEcCC-cccccCCceeEEEEECCCCCCCCeEEEE
Confidence 6999999999 99999999998532 223556889998888888886533 345566554 679999765799999999
Q ss_pred ec
Q psy5866 96 LQ 97 (98)
Q Consensus 96 ~~ 97 (98)
++
T Consensus 509 ~~ 510 (581)
T 3o3u_N 509 LD 510 (581)
T ss_dssp ET
T ss_pred EC
Confidence 75
No 108
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.31 E-value=1.5e-11 Score=79.24 Aligned_cols=84 Identities=19% Similarity=0.380 Sum_probs=62.8
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCC-ceecCCCcEEEEEEcC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGAN-PVATEGRAIELVCSTS 84 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~-~~~~~g~~~~l~C~~~ 84 (98)
++.+....+..+|.|.+++.+ |+|.|+|.+.+. .+..+..+.|.|..+| .+..... ..+.+|+.+.|.|.+.
T Consensus 53 ~~~~~~~~~~~~L~i~~v~~~-D~G~Y~C~a~n~---~g~~~~~~~l~V~~~P---~~~~~~~~~~~~~g~~~~l~C~~~ 125 (389)
T 2jll_A 53 RIEVKGQHGSSSLHIKDVKLS-DSGRYDCEAASR---IGGHQKSMYLDIEYAP---KFISNQTIYYSWEGNPINISCDVK 125 (389)
T ss_dssp SEEEEECSSEEEEEEESCCGG-GCEEEEEEEECS---SCEEEEEEEEEEEEEE---EECCSCCEEEECTTCCEEEEECEE
T ss_pred eEEEeccCCcceEEEcccChh-hCEEEEEEEEeC---CCCcceEEEEEEEeCC---EEecCcceEEeccCCEEEEEEEEE
Confidence 344444456778999999999 999999999985 3445667788887443 3422222 3578999999999985
Q ss_pred CCCCCCeEEEEec
Q psy5866 85 GGSPDPQISVTLQ 97 (98)
Q Consensus 85 ~~~p~~~~~W~~~ 97 (98)
|.|.+.+.|+++
T Consensus 126 -g~p~~~i~W~~~ 137 (389)
T 2jll_A 126 -SNPPASIHWRRD 137 (389)
T ss_dssp -EESCCEEEEEET
T ss_pred -ecCCCeEEEEEC
Confidence 788999999875
No 109
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.31 E-value=6.2e-12 Score=78.11 Aligned_cols=89 Identities=17% Similarity=0.170 Sum_probs=56.7
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC------CC---------------EEe
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ------PP---------------KIS 64 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~------~p---------------~i~ 64 (98)
|+.+....+.++|+|.+++.+ |+|.|+|.+.+... ........|.|..++. +| .+.
T Consensus 80 r~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~~~--~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~ 156 (268)
T 1x9q_A 80 RFSGSGSGTDFTLKINRVEAE-DLGVYFCSQSTHVP--WTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLD 156 (268)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSSSS--CEECCCEEEC------------------------CGGGCEEE
T ss_pred cEEEEcCCCEEEEEECCCChh-HCEEEEEEEecCCC--ceEcCCEEEEEccCccCCCccccccccccccccccccceEEE
Confidence 444444456789999999999 99999999987421 1122335666654321 11 232
Q ss_pred CCCCceecCCCcEEEEEEcCCCCC-CCeEEEEec
Q psy5866 65 PGANPVATEGRAIELVCSTSGGSP-DPQISVTLQ 97 (98)
Q Consensus 65 ~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~ 97 (98)
......+.+|+.+.|+|.+.+..+ .+.+.|+++
T Consensus 157 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 190 (268)
T 1x9q_A 157 ETGGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQ 190 (268)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGCEEEEEEE
T ss_pred CCCceEecCCCcEEEEEEecCccccccEEEEEEe
Confidence 223568899999999999864333 378999985
No 110
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.31 E-value=3.6e-11 Score=72.96 Aligned_cols=77 Identities=23% Similarity=0.426 Sum_probs=59.3
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC-CCCEEe--CCCCceecCCCcEEEEEEcCCCCCCCe
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP-QPPKIS--PGANPVATEGRAIELVCSTSGGSPDPQ 91 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~-~~p~i~--~~~~~~~~~g~~~~l~C~~~~~~p~~~ 91 (98)
..+|.|.+++.. |+|.|+|.+.+. .......+.|.|...+ ..|.+. ......+.+|+.+.|.|.+. +.|.+.
T Consensus 71 ~~~L~i~~v~~~-d~G~Y~C~~~~~---~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~-~~p~p~ 145 (241)
T 3grw_A 71 QWSLVMESVVPS-DRGNYTCVVENK---FGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVY-SDAQPH 145 (241)
T ss_dssp GTEEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEE-CSSCCE
T ss_pred ceEEEEEeCCcc-cCEEEEEEEeec---CCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEe-cCCCCE
Confidence 347999999999 999999999984 4555666778876533 334432 22456788999999999985 788899
Q ss_pred EEEEe
Q psy5866 92 ISVTL 96 (98)
Q Consensus 92 ~~W~~ 96 (98)
+.|++
T Consensus 146 v~W~~ 150 (241)
T 3grw_A 146 IQWLK 150 (241)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99997
No 111
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.30 E-value=1.6e-11 Score=76.26 Aligned_cols=86 Identities=22% Similarity=0.344 Sum_probs=62.2
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSG 85 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~ 85 (98)
++.........+|.|.+++.+ |+|.|+|.+.+..+ ...+..+.+.|..++..... .....+.+|+.+.|.|.+.
T Consensus 50 ~~~~~~~~~~~~L~i~~~~~~-D~G~Y~C~~~n~~g--~~~~~~~~l~v~~~~~~~~~--~~~~~v~~G~~v~l~C~~~- 123 (291)
T 2wim_A 50 RVVVQKEGVRSRLTIYNANIE-DAGIYRCQATDAKG--QTQEATVVLEIYQKLTFREV--VSPQEFKQGEDAEVVCRVS- 123 (291)
T ss_dssp TEEEEEETTEEEEEECSCCGG-GCEEEEEEEECSSS--CEEEEEEEEEEECCCBCCSC--CCSEEEETTSCEEECCCCB-
T ss_pred cEEEecCCCEEEEEEccCCcc-cCEEEEEEEecccC--ceEEEEEEEEecCCcceEeC--CCChhhcCCCCEEEEEEEc-
Confidence 333433445678999999999 99999999998532 23345567777655443221 2446788999999999985
Q ss_pred CCCCCeEEEEec
Q psy5866 86 GSPDPQISVTLQ 97 (98)
Q Consensus 86 ~~p~~~~~W~~~ 97 (98)
+.|.+.+.|+++
T Consensus 124 ~~p~~~v~W~~~ 135 (291)
T 2wim_A 124 SSPAPAVSWLYH 135 (291)
T ss_dssp CSSCCEEEEECC
T ss_pred cCCCCEEEEEEC
Confidence 788899999864
No 112
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.30 E-value=4.2e-12 Score=79.50 Aligned_cols=86 Identities=10% Similarity=0.220 Sum_probs=61.1
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC------------CCCCCEEeCCCCceecC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT------------PPQPPKISPGANPVATE 73 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~------------~~~~p~i~~~~~~~~~~ 73 (98)
++......+..+|+|.+++.+ |+|.|+|.+.+..+ . ...+.+.|.. +|..+.... ....+.+
T Consensus 48 ~~~~~~~~~~~~L~I~~~~~~-D~G~Y~C~~~n~~g---~-~~s~~l~v~~~~~~~~~~~~~~~p~~~~~~~-~~~~v~~ 121 (312)
T 2y23_A 48 RLEVESKGNKTKMTFKDLGMD-DLGIYSCDVTDTDG---I-ASSYLIDEEELKRLLALSHEHKFPTVPVKSE-LAVEILE 121 (312)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEESSSCC---C-CEEEEECHHHHHHHHHHHHHHHSCBCCEEEE-EEEEECS
T ss_pred CEEEEEeCCEEEEEECcCCcc-CCEEEEEEEEeCCC---c-EEEEEEEEeeeeeeecccccCCCCccccccC-CceEEee
Confidence 444444556678999999999 99999999988532 1 2234455431 444333221 2568899
Q ss_pred CCcEEEEEEcCCCCCCCeEEEEec
Q psy5866 74 GRAIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 74 g~~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
|+.+.|.|.+..+.|.+.+.|+++
T Consensus 122 G~~v~l~C~~~~~~p~~~v~W~~~ 145 (312)
T 2y23_A 122 KGQVRFWMQAEKLSGNAKVNYIFN 145 (312)
T ss_dssp SSCEEEEEEESCCCSSCEEEEEET
T ss_pred CCCEEEEEEEEeCCCCCEEEEEEC
Confidence 999999999976889999999975
No 113
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.30 E-value=4.2e-11 Score=74.65 Aligned_cols=82 Identities=16% Similarity=0.256 Sum_probs=61.2
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCC--CeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSG--QDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDP 90 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~--~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~ 90 (98)
.....|.|.+++.+ |+|.|+|.+.+.... ....+..+.|.|...+.+|.+...+...+.+|++++|.|.+. +. .+
T Consensus 59 ~~~~~L~I~~v~~~-DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~~~V~~G~~vtL~C~~~-~~-~~ 135 (257)
T 1b6u_A 59 VSKANFSIGPMMQD-LAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSR-SS-YD 135 (257)
T ss_dssp CEEEEEEECSCCTT-TCEEEEEEEECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSCTTCBTTCEEEEEEECS-SC-CS
T ss_pred CceEEEEeecCCcc-cCEEEEEeEeccCCCccccccCCCEEEecccCCCCcceEccCCCccCCCCEEEEEEeCC-CC-Cc
Confidence 34678999999999 999999999864221 123355678888776667777543445789999999999986 33 47
Q ss_pred eEEEEec
Q psy5866 91 QISVTLQ 97 (98)
Q Consensus 91 ~~~W~~~ 97 (98)
.+.|+|+
T Consensus 136 ~~~w~k~ 142 (257)
T 1b6u_A 136 MYHLSRE 142 (257)
T ss_dssp EEEEEET
T ss_pred EEEEEEC
Confidence 8999975
No 114
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.30 E-value=1.7e-11 Score=80.62 Aligned_cols=86 Identities=22% Similarity=0.253 Sum_probs=59.2
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC-CCCCCEEe-CCCCceecCCCcEEEEEEcCCCCC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT-PPQPPKIS-PGANPVATEGRAIELVCSTSGGSP 88 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~-~~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~p 88 (98)
...+.++|+|.+++.+ |+|.|+|.+.+.............|.|.. .+.+|.+. ..+...+.+|+.+.|.|.+.++.|
T Consensus 74 ~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P 152 (444)
T 1igt_B 74 NAKNTLYLQMSRLKSE-DTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFP 152 (444)
T ss_dssp TTTTEEEEEECSCCGG-GCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBS
T ss_pred CCCCeEEEEECCCCHH-HCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeC
Confidence 3456789999999999 99999999998532111233346777763 23344431 123334579999999999975567
Q ss_pred CC-eEEEEec
Q psy5866 89 DP-QISVTLQ 97 (98)
Q Consensus 89 ~~-~~~W~~~ 97 (98)
.| .+.|+++
T Consensus 153 ~p~~v~W~~~ 162 (444)
T 1igt_B 153 EPVTLTWNSG 162 (444)
T ss_dssp SCCEEEEGGG
T ss_pred CCcEEEEecC
Confidence 76 9999864
No 115
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.30 E-value=3.4e-11 Score=73.32 Aligned_cols=85 Identities=18% Similarity=0.172 Sum_probs=58.4
Q ss_pred EeCCCCeEEEEEccceeeccCeEEEEEEEECCC-----CCeeeEeeEEEEEEC-CCCCCEEe-CCCCceecCCCcEEEEE
Q psy5866 9 YRPDSGRYDLIISNASFERDNGKFECRLKAAGS-----GQDLHSQVYTVTVLT-PPQPPKIS-PGANPVATEGRAIELVC 81 (98)
Q Consensus 9 ~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~-----~~~~~~~~~~l~v~~-~~~~p~i~-~~~~~~~~~g~~~~l~C 81 (98)
.+...+.++|+|.+++.+ |+|.|.|.+.+... ..........|.|.. ++.+|.+. ..+...+.+|+.+.|.|
T Consensus 72 ~~~~~~~~sL~I~~v~~~-DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C 150 (230)
T 3n9g_H 72 RDTSTSTVYMELSSLRSE-DTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGC 150 (230)
T ss_dssp EETTTTEEEEEECSCCGG-GCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEE
T ss_pred ecCCCCEEEEEECCCChh-hCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEE
Confidence 445667899999999999 99999999987420 011223345677753 34455553 22334567899999999
Q ss_pred EcCCCCC-CCeEEE
Q psy5866 82 STSGGSP-DPQISV 94 (98)
Q Consensus 82 ~~~~~~p-~~~~~W 94 (98)
.+.++.| .+.+.|
T Consensus 151 ~~~~~~P~~~~v~W 164 (230)
T 3n9g_H 151 LVKDYFPEPVTVSW 164 (230)
T ss_dssp EEEEEBSSCCEEEE
T ss_pred EEEeEECCCEEEEE
Confidence 9986566 457899
No 116
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.30 E-value=6.5e-12 Score=76.75 Aligned_cols=85 Identities=22% Similarity=0.361 Sum_probs=57.8
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCC-CCeeeEeeEEEEEEC---CCCCCEE--eCCCCceecCCCcEEEEEEcCC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGS-GQDLHSQVYTVTVLT---PPQPPKI--SPGANPVATEGRAIELVCSTSG 85 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~-~~~~~~~~~~l~v~~---~~~~p~i--~~~~~~~~~~g~~~~l~C~~~~ 85 (98)
..+.++|+|.+++.+ |+|.|+|.+.+... ..........|.|.. ...+|.+ .......+.+|+.+.|.|.+.+
T Consensus 72 ~~~~~sL~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g 150 (245)
T 4ei6_B 72 DGSYFTLKIQPTALE-DSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATG 150 (245)
T ss_dssp TTSCEEEEECSCCGG-GCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEE
T ss_pred cCceEEEEECCCCHh-HCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEee
Confidence 356789999999999 99999999986321 122333445677764 1233433 2223334667999999999875
Q ss_pred CCCCC-eEEEEec
Q psy5866 86 GSPDP-QISVTLQ 97 (98)
Q Consensus 86 ~~p~~-~~~W~~~ 97 (98)
..|.+ .+.|+++
T Consensus 151 ~~p~~~~v~W~~~ 163 (245)
T 4ei6_B 151 FYPDHVELSWWVN 163 (245)
T ss_dssp EBSSCEEEEEEET
T ss_pred EeCCCeEEEEEEC
Confidence 56655 8999875
No 117
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.30 E-value=2.2e-11 Score=73.19 Aligned_cols=77 Identities=21% Similarity=0.440 Sum_probs=59.7
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC-CCEEeC--CCCceecCCCcEEEEEEcCCCCCCCe
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ-PPKISP--GANPVATEGRAIELVCSTSGGSPDPQ 91 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~-~p~i~~--~~~~~~~~g~~~~l~C~~~~~~p~~~ 91 (98)
..+|.|.+++.. |+|.|+|.+.+. .......+.|.|...+. .|.+.. .....+.+|+.+.|.|.+. +.|.+.
T Consensus 75 ~~~L~i~~~~~~-d~G~Y~C~~~n~---~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~ 149 (231)
T 3ojm_B 75 HWSLIMESVVPS-DKGNYTCVVENE---YGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVY-SDAQPH 149 (231)
T ss_dssp GTEEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEE-CSSCCE
T ss_pred cceEEEecCCcc-cCEEEEEEEecc---cCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEe-cCCCCE
Confidence 347999999999 999999999985 45556677888876543 334421 2456788999999999985 688899
Q ss_pred EEEEe
Q psy5866 92 ISVTL 96 (98)
Q Consensus 92 ~~W~~ 96 (98)
+.|++
T Consensus 150 v~W~~ 154 (231)
T 3ojm_B 150 IQWIK 154 (231)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99997
No 118
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.30 E-value=2.2e-11 Score=72.26 Aligned_cols=80 Identities=25% Similarity=0.520 Sum_probs=57.1
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQI 92 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 92 (98)
.++++|+|.+++.+ |+|.|.|.+.+.. .........+.+..++.. .........+.++..+.+.|.+. +.|.|.+
T Consensus 76 ~~~~sL~I~~v~~~-D~G~Y~C~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~c~~~-g~p~p~i 150 (218)
T 4frw_A 76 PLDGSVLLRNAVQA-DEGEYECRVSTFP--AGSFQARLRLRVLVPPLP-SLNPGPALEEGQGLTLAASCTAE-GSPAPSV 150 (218)
T ss_dssp TTBCCEEESSCCGG-GCEEEEEEEEEET--TEEEEEEEEEEEEBCCCC-EEEECSCEETTCCSEEEEEEEEE-EBSCCEE
T ss_pred CCeEEEEEeeccHH-HCCceeEEEEecc--CceeeeEEEEEEeeeccc-eeeeeeeeeeeeccccceeeecc-CCcCceE
Confidence 34578999999999 9999999998742 233333344444434333 33323456778889999999985 7899999
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 151 ~W~~~ 155 (218)
T 4frw_A 151 TWDTE 155 (218)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 99975
No 119
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.30 E-value=3.8e-12 Score=77.86 Aligned_cols=84 Identities=21% Similarity=0.313 Sum_probs=56.9
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCC-CeeeEeeEEEEEEC---CCCCCEE--eCCCCceecCCCcEEEEEEcCCC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSG-QDLHSQVYTVTVLT---PPQPPKI--SPGANPVATEGRAIELVCSTSGG 86 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~-~~~~~~~~~l~v~~---~~~~p~i--~~~~~~~~~~g~~~~l~C~~~~~ 86 (98)
.+.++|+|.+++.+ |+|.|+|.+.+.... .........|.|.. .+.+|.+ .......+.+|+.+.|.|.+.+.
T Consensus 74 ~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~ 152 (246)
T 4dzb_B 74 LTLSTLTVTSAHPE-DSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGF 152 (246)
T ss_dssp TTEEEEEECSCCGG-GCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEE
T ss_pred CCEEEEEECCCCHH-HCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccC
Confidence 56789999999999 999999999864210 12333445677764 2234443 22233356679999999998754
Q ss_pred CCCC-eEEEEec
Q psy5866 87 SPDP-QISVTLQ 97 (98)
Q Consensus 87 ~p~~-~~~W~~~ 97 (98)
.|++ .+.|+++
T Consensus 153 ~p~~~~v~W~k~ 164 (246)
T 4dzb_B 153 YPDHVELSWWVN 164 (246)
T ss_dssp BSSCEEEEEEET
T ss_pred cCCceEEEEEEC
Confidence 4443 8999975
No 120
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.29 E-value=9.3e-12 Score=76.15 Aligned_cols=85 Identities=18% Similarity=0.247 Sum_probs=57.3
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCC---CCeeeEeeEEEEEEC---CCCCCEE--eCCCCceecCCCcEEEEEEc
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGS---GQDLHSQVYTVTVLT---PPQPPKI--SPGANPVATEGRAIELVCST 83 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~---~~~~~~~~~~l~v~~---~~~~p~i--~~~~~~~~~~g~~~~l~C~~ 83 (98)
..+.++|+|.+++.+ |+|.|+|.+.+..+ ..........|.|.. ...+|.+ .......+.+|+.+.|.|.+
T Consensus 70 ~~~~~sL~I~~v~~~-D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~ 148 (245)
T 3nfj_J 70 QDRQFILSSKKLLLS-DSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLA 148 (245)
T ss_dssp ETTEEEEEESSCCGG-GCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEE
T ss_pred CCCEEEEEECCCChh-hCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEE
Confidence 356789999999999 99999999987211 122333445777765 3334444 22122335568999999999
Q ss_pred CCCCCCC-eEEEEec
Q psy5866 84 SGGSPDP-QISVTLQ 97 (98)
Q Consensus 84 ~~~~p~~-~~~W~~~ 97 (98)
.+..|++ .+.|+++
T Consensus 149 ~g~~p~~~~v~W~k~ 163 (245)
T 3nfj_J 149 TGFFPDHVELSWWVN 163 (245)
T ss_dssp EEEBSSCEEEEEEET
T ss_pred ccCcCCCEEEEEEEC
Confidence 7545655 7899875
No 121
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.29 E-value=9.9e-12 Score=76.59 Aligned_cols=76 Identities=14% Similarity=0.302 Sum_probs=56.9
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEc--CCCCCC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCST--SGGSPD 89 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~--~~~~p~ 89 (98)
..++.+|.|.+++.+ |+|.|+|.+.+... .......+.|.|. +..| ....+.+|+.+.|.|.+ ..+.|.
T Consensus 80 ~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~-~~~~~~~~~l~V~--~~~p-----~~~~v~~G~~v~L~C~~~~~~~~p~ 150 (268)
T 3mj6_A 80 FHNDGSLLLQDVQKA-DEGIYTCEIRLKNE-SMVMKKPVELWVL--PEEP-----RDLRVRVGDTTQMRCSIQSTEEKRV 150 (268)
T ss_dssp TTTBCCEEECSCCGG-GCEEEEEEEEETTC-CCEEEEEEEEEEE--CCCC-----SEEEEETTCCEEECCBCEESSSSCC
T ss_pred CCCEEEEEECCCCHh-HCEEEEEEEEecCC-cceEEEEEEEEEe--ccCC-----CccccccCCcEEEEEEecCCCCCCc
Confidence 345578999999999 99999999998532 2334445666664 3322 23578899999999998 357789
Q ss_pred CeEEEEe
Q psy5866 90 PQISVTL 96 (98)
Q Consensus 90 ~~~~W~~ 96 (98)
+.+.|++
T Consensus 151 ~~v~W~~ 157 (268)
T 3mj6_A 151 TKVNWMF 157 (268)
T ss_dssp CEEEEEE
T ss_pred cceEEEe
Confidence 9999997
No 122
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.29 E-value=1.3e-11 Score=72.22 Aligned_cols=75 Identities=16% Similarity=0.203 Sum_probs=56.0
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEE
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQIS 93 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~ 93 (98)
+..+|.|.+++.+ |+|.|+|.+.+. ..+..+.|.|.. .++.+.. ....+.+|+.+.|.|.+.++.|.+.+.
T Consensus 52 ~~~~L~i~~~~~~-d~G~Y~C~~~n~-----~~s~~~~l~V~~--~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~ 122 (175)
T 1fnl_A 52 QASSYFIDAATVN-DSGEYRCQTNLS-----TLSDPVQLEVHI--GWLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVT 122 (175)
T ss_dssp SCSEEEESSCCGG-GCEEEEEECSSS-----CCCCCEEEEEEC--SSEEEEC-SCSEEETTCCEEEEEEECTTCCCEEEE
T ss_pred CceEEEEeCCCcc-cCEEEEEEeeCC-----cccccEEEEEeC--CCceeeC-CCceecCCCCEEEEEEcCCCCCceEEE
Confidence 3457999999999 999999999863 224456777762 2233433 446788999999999987555566999
Q ss_pred EEec
Q psy5866 94 VTLQ 97 (98)
Q Consensus 94 W~~~ 97 (98)
|+++
T Consensus 123 W~k~ 126 (175)
T 1fnl_A 123 YLQN 126 (175)
T ss_dssp EEET
T ss_pred EEEC
Confidence 9975
No 123
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.29 E-value=4.2e-11 Score=73.93 Aligned_cols=81 Identities=12% Similarity=0.241 Sum_probs=59.4
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQI 92 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 92 (98)
.....|.|.+++.+ |+|.|+|.+.+... ....+..+.|.|.....+|.+...+...+.+|++++|.|.+.. +.+.+
T Consensus 57 ~~~~~L~I~~v~~~-DsG~Y~C~~~~~~~-~s~~S~~~~L~V~~~~~~P~i~~~p~~~v~~G~~vtL~C~~~~--~~~~~ 132 (242)
T 1p6f_A 57 INKVKFYIPDMNSR-MAGQYSCIYRVGEL-WSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDT--ATSMF 132 (242)
T ss_dssp CCEEEEEECSCCGG-GCEEEEEEEEETTE-ECCCCCCEEEEEECCSCCCEEEEESCSEEETTCEEEEEEECTT--SCSEE
T ss_pred cceeEEEecCCCcc-cCeEEEEEEecCCc-cccCCcceEEEeecccCCCceEccCCCccCCCCcEEEEEecCC--CCCEE
Confidence 45678999999999 99999999976311 1123455778887655566664334567899999999999863 34689
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 133 ~w~k~ 137 (242)
T 1p6f_A 133 LLLKE 137 (242)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99975
No 124
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.29 E-value=4.6e-11 Score=74.93 Aligned_cols=79 Identities=24% Similarity=0.315 Sum_probs=60.8
Q ss_pred CeEEEEEcccee-eccCeEEEEEEEECCCCCeeeEeeEEEEEECCC----CCCEE-eCCCCceecCCCcEEEEEEcCCCC
Q psy5866 14 GRYDLIISNASF-ERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP----QPPKI-SPGANPVATEGRAIELVCSTSGGS 87 (98)
Q Consensus 14 ~~~~l~I~~v~~-~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~----~~p~i-~~~~~~~~~~g~~~~l~C~~~~~~ 87 (98)
....|+|.+++. . |+|.|+|.+.+. ....+..+.|.|..++ ..|.+ .......+.+|+.+.|.|.+. |.
T Consensus 61 ~~~~L~i~~~~~~~-D~G~Y~C~a~n~---~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~-g~ 135 (304)
T 2yd9_A 61 AGAVLRIQPLRTPR-DENVYECVAQNS---VGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAAS-GN 135 (304)
T ss_dssp TEEEEEECSCCTTT-TCSEEEEEEECS---SCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEE-CS
T ss_pred CceEEEEecccccC-CCeEEEEEEECC---CCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECc-cC
Confidence 347899999998 9 999999999985 3445666788887543 22444 222456788999999999985 78
Q ss_pred CCCeEEEEec
Q psy5866 88 PDPQISVTLQ 97 (98)
Q Consensus 88 p~~~~~W~~~ 97 (98)
|.+.+.|+++
T Consensus 136 p~~~v~W~k~ 145 (304)
T 2yd9_A 136 PDPEITWFKD 145 (304)
T ss_dssp SCCEEEEEET
T ss_pred CCCeEEEEEC
Confidence 9999999975
No 125
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.28 E-value=9.3e-12 Score=77.26 Aligned_cols=91 Identities=19% Similarity=0.248 Sum_probs=60.5
Q ss_pred EEEEe-CCCCeEEEEEccceeeccCeEEEEEEEECCCC-CeeeEeeEEEEEEC---CCCCCEE--eCCCCceecCCCcEE
Q psy5866 6 IIDYR-PDSGRYDLIISNASFERDNGKFECRLKAAGSG-QDLHSQVYTVTVLT---PPQPPKI--SPGANPVATEGRAIE 78 (98)
Q Consensus 6 ~~~~~-~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~-~~~~~~~~~l~v~~---~~~~p~i--~~~~~~~~~~g~~~~ 78 (98)
|+.+. ...+.++|+|.+++.+ |+|.|+|.+.+.... .........|.|.. ...+|.+ .......+.+|+.+.
T Consensus 90 r~~~~~~~~~~~sL~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~ 168 (270)
T 3qib_D 90 RFSAECPSNSPCSLEIQSSEAG-DSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKAT 168 (270)
T ss_dssp HEEEECCTTSCEEEEESSCCGG-GCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEE
T ss_pred cEEEEeCCCcEEEEEECCCCHh-HCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceE
Confidence 44443 2466889999999999 999999999863211 12333445677765 2224443 222233455699999
Q ss_pred EEEEcCCCCCCC-eEEEEec
Q psy5866 79 LVCSTSGGSPDP-QISVTLQ 97 (98)
Q Consensus 79 l~C~~~~~~p~~-~~~W~~~ 97 (98)
|.|.+.+..|.+ .+.|+++
T Consensus 169 L~C~~~g~~P~~~~v~W~k~ 188 (270)
T 3qib_D 169 LVCLATGFYPDHVELSWWVN 188 (270)
T ss_dssp EEEEEEEEBSSCEEEEEEET
T ss_pred EEEEecceeCCCeEEEEEEC
Confidence 999997557766 8999875
No 126
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.28 E-value=1.6e-11 Score=74.91 Aligned_cols=91 Identities=14% Similarity=0.143 Sum_probs=59.7
Q ss_pred eEEEEe--CCCCeEEEEEccceeeccCeEEEEEEEECCC-CCeeeEeeEEEEEEC--------CCCCCEEeCCCCceecC
Q psy5866 5 EIIDYR--PDSGRYDLIISNASFERDNGKFECRLKAAGS-GQDLHSQVYTVTVLT--------PPQPPKISPGANPVATE 73 (98)
Q Consensus 5 ~~~~~~--~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~-~~~~~~~~~~l~v~~--------~~~~p~i~~~~~~~~~~ 73 (98)
.|+.+. ...+.++|+|.+++.+ |+|.|.|.+.+... ..........|.|.. .+..+.+.......+.+
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~ 144 (230)
T 1ypz_F 66 KKMEASKNPSASTSILTIYSLEEE-DEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNL 144 (230)
T ss_dssp SEEEEEECCTTTEEEEEECSCCGG-GCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHH
T ss_pred CeEEEEEcCCCCEEEEEECcCChh-hCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhcc
Confidence 455543 3347889999999999 99999999986310 011222345788862 12233443222234567
Q ss_pred CCcEEEEEEcCCCCCC-CeEEEEe
Q psy5866 74 GRAIELVCSTSGGSPD-PQISVTL 96 (98)
Q Consensus 74 g~~~~l~C~~~~~~p~-~~~~W~~ 96 (98)
|..+.|.|.+.+..|. +.+.|++
T Consensus 145 g~~~~L~C~~~g~~P~~~~v~W~~ 168 (230)
T 1ypz_F 145 HKTGTYLCLLEAFFPDVIRVYWKE 168 (230)
T ss_dssp HSCEEEEEEEEEESSCCCEEEEEC
T ss_pred CCcceEEEEEeeecCCCeEEEEEc
Confidence 8899999999866675 6999997
No 127
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.28 E-value=1.2e-11 Score=74.29 Aligned_cols=73 Identities=16% Similarity=0.222 Sum_probs=56.5
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVT 95 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~ 95 (98)
.+|.|.+++.+ |+|.|+|.+.+ ...+..+.|.|..++ +.+. .+...+.+|+.+.|.|.+..+.|.+.+.|+
T Consensus 54 ~~L~i~~v~~~-D~G~Y~C~a~n-----~~~s~~~~l~V~~~p--~~~~-~~~~~v~~G~~v~L~C~~~~~~p~~~v~W~ 124 (204)
T 3sgj_C 54 SSYFIDAATVD-DSGEYRCQTQL-----STLSDPVQLEVHIGW--LLLQ-APRWVFKEEDPIHLRCHSWKNTALHKVTYL 124 (204)
T ss_dssp SEEEESSCCGG-GCEEEEEEETT-----SBCCCCEEEEEECSS--EEEE-CSCSEEETTCCEEEEEEEGGGCCCEEEEEE
T ss_pred cEEEEeccccc-CCEEEEEEeCC-----CcccccEEEEEecCc--eEec-CCceeEeCCCcEEEEEEecCCCCCceEEEE
Confidence 67999999999 99999999875 233445677776443 2333 244788899999999999766778899999
Q ss_pred ec
Q psy5866 96 LQ 97 (98)
Q Consensus 96 ~~ 97 (98)
++
T Consensus 125 k~ 126 (204)
T 3sgj_C 125 QN 126 (204)
T ss_dssp ET
T ss_pred EC
Confidence 75
No 128
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.28 E-value=6.1e-12 Score=73.60 Aligned_cols=76 Identities=21% Similarity=0.267 Sum_probs=56.9
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQI 92 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 92 (98)
.+..+|.|.+++.+ |+|.|+|.+.+. ..+..+.|.|..+ ...+.. ....+.+|+.+.|.|.+..+.|.+.+
T Consensus 48 ~~~~~L~i~~v~~~-d~G~Y~C~~~~~-----~~s~~~~l~V~~~--~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~~ 118 (176)
T 1f2q_A 48 ETNSSLNIVNAKFE-DSGEYKCQHQQV-----NESEPVYLEVFSD--WLLLQA-SAEVVMEGQPLFLRCHGWRNWDVYKV 118 (176)
T ss_dssp CCSSEEEECSCCGG-GCEEEEEECTTS-----SCCCCEEEEEECS--SEEEEE-SCSEEETTSCEEEEEEEGGGCCEEEE
T ss_pred CCceEEEEecccee-cCEEEEEEcCCc-----cccccEEEEEeCc--ceeecC-CcceeeCCCCEEEEEEecCCCCceEE
Confidence 44568999999999 999999999763 2234567777622 223322 44678899999999998667788899
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 119 ~W~~~ 123 (176)
T 1f2q_A 119 IYYKD 123 (176)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99975
No 129
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.28 E-value=4.9e-11 Score=79.27 Aligned_cols=85 Identities=21% Similarity=0.311 Sum_probs=58.1
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCC-e--eeEeeEEEEEEC-CCCCCEEeCCCCceecCCCcEEEEEEcCCCC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQ-D--LHSQVYTVTVLT-PPQPPKISPGANPVATEGRAIELVCSTSGGS 87 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~-~--~~~~~~~l~v~~-~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~ 87 (98)
..+.++|+|.+++.+ |+|.|+|.+.+..+.. . .......|.|.. .+..|.+.......+.+|+.+.|.|.+.+..
T Consensus 76 ~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~g~~v~L~C~~~g~~ 154 (475)
T 1iga_A 76 SATTAYMGLSSLRPE-DTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLVQGFF 154 (475)
T ss_pred CCCeEEEEECCCChh-hCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCccccCCCCeEEEEEEEeeec
Confidence 356789999999999 9999999998853210 0 223345677763 3344555321222347899999999997555
Q ss_pred CC-C-eEEEEec
Q psy5866 88 PD-P-QISVTLQ 97 (98)
Q Consensus 88 p~-~-~~~W~~~ 97 (98)
|. + .+.|+++
T Consensus 155 P~~p~~v~W~~~ 166 (475)
T 1iga_A 155 PQEPLSVTWSES 166 (475)
T ss_pred CCCceEEEEcCC
Confidence 76 5 9999864
No 130
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.28 E-value=9.8e-12 Score=78.38 Aligned_cols=80 Identities=23% Similarity=0.249 Sum_probs=58.4
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQI 92 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 92 (98)
.++++|+|.+++.+ |+|.|+|.+.+.. ....+..+.|.+..+|..+... ....+..+....+.|.+..+.|.+.+
T Consensus 76 ~~~~sL~I~~v~~~-D~G~Y~C~v~~~~--~~~~~~~~~l~v~~~P~~~~~~--~~~~~~~~~~~~~~C~~~~~~P~~~i 150 (313)
T 4fqp_A 76 LRNASLRMFGLRVE-DEGNYTCLFVTFP--QGSRSVDIWLRVLAKPQNTAEV--QKVQLTGEPVPMARCVSTGGRPPAQI 150 (313)
T ss_dssp CCBCCEEECSCCGG-GCEEEEEEEECSS--SCEEEEEEEECCBBCCEEEEEE--CCBCCCSSCEEEEEEEEEEEBSCCEE
T ss_pred ccceEEEECcCChh-hCEEEEEEEeecc--CcceeeeeeeeeccCCcceecc--cceEeecCceEEEEEEccCccCCcEE
Confidence 34578999999999 9999999987642 2344555666665555433222 34566778888999998778999999
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 151 ~W~~~ 155 (313)
T 4fqp_A 151 TWHSD 155 (313)
T ss_dssp EEEET
T ss_pred EeecC
Confidence 99975
No 131
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.28 E-value=8.5e-12 Score=77.97 Aligned_cols=91 Identities=19% Similarity=0.247 Sum_probs=59.8
Q ss_pred EEEEeC-CCCeEEEEEccceeeccCeEEEEEEEECCC---CCeeeEeeEEEEEECC---CCCCEEe--CCCCceecCCCc
Q psy5866 6 IIDYRP-DSGRYDLIISNASFERDNGKFECRLKAAGS---GQDLHSQVYTVTVLTP---PQPPKIS--PGANPVATEGRA 76 (98)
Q Consensus 6 ~~~~~~-~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~---~~~~~~~~~~l~v~~~---~~~p~i~--~~~~~~~~~g~~ 76 (98)
|+.+.. ..+.++|+|.+++.+ |+|.|+|.+.+... ..........|.|... +.+|.+. ......+.+|+.
T Consensus 89 R~~~~~~~~~~~sL~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~ 167 (279)
T 2wbj_D 89 KFLINHASLTLSTLTVTSAHPE-DSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQK 167 (279)
T ss_dssp SEEEEECSSSEEEEEESSCCGG-GCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSC
T ss_pred cEEEEeCCCCEEEEEEccCCcc-CCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCc
Confidence 444432 356789999999999 99999999998311 0112223356777653 2345442 112234457899
Q ss_pred EEEEEEcCCCCCC-CeEEEEec
Q psy5866 77 IELVCSTSGGSPD-PQISVTLQ 97 (98)
Q Consensus 77 ~~l~C~~~~~~p~-~~~~W~~~ 97 (98)
+.|.|.+.+..|. +.+.|+++
T Consensus 168 v~L~C~~~g~~P~~~~v~W~k~ 189 (279)
T 2wbj_D 168 ATLVCLATGFYPDHVELSWWVN 189 (279)
T ss_dssp CEEEEEEEEEBSSCEEEEEEET
T ss_pred eEEEEEEeeEcCCCcEEEEEEC
Confidence 9999999755564 79999975
No 132
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.27 E-value=7.6e-12 Score=81.81 Aligned_cols=89 Identities=10% Similarity=0.133 Sum_probs=61.5
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeC-CCCceecCCCcEEEEEEcC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISP-GANPVATEGRAIELVCSTS 84 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~-~~~~~~~~g~~~~l~C~~~ 84 (98)
|+......+.++|+|.+++.+ |+|.|+|.+.+... ........|.|..+..+|.+.. .......+|..+.|.|.+.
T Consensus 65 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~a~n~~~--~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~ 141 (438)
T 1qgc_4 65 RFSGSGSRTDFTLTIDPVEAD-DVATYYCQQSNEVP--LTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLN 141 (438)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSSTT--CCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEE
T ss_pred cEEEEccCCcEEEEeCCCcCc-CCeeEEEEEecCCC--ccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEc
Confidence 344444556788999999999 99999999988532 1223345677755444555521 1333445688999999987
Q ss_pred CCCCCC-eEEEEec
Q psy5866 85 GGSPDP-QISVTLQ 97 (98)
Q Consensus 85 ~~~p~~-~~~W~~~ 97 (98)
++.|.+ .+.|+++
T Consensus 142 g~~p~~~~v~W~k~ 155 (438)
T 1qgc_4 142 NFYPKDINVKWKID 155 (438)
T ss_dssp EEBSSCEEEEEEET
T ss_pred cccCCCcEEEEEEC
Confidence 657777 8999975
No 133
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.27 E-value=2.3e-11 Score=76.19 Aligned_cols=86 Identities=14% Similarity=0.098 Sum_probs=59.0
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECC------CCCeeeEeeEEEEEEC-CC-----------CCCEEeCCCCceec
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAG------SGQDLHSQVYTVTVLT-PP-----------QPPKISPGANPVAT 72 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~------~~~~~~~~~~~l~v~~-~~-----------~~p~i~~~~~~~~~ 72 (98)
...+.++|+|.+++.+ |+|.|.|.+.+.. ...........|.|.. ++ .++.+...+...+.
T Consensus 74 ~~~~~~sL~I~~v~~~-DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~v~ 152 (280)
T 3fku_X 74 QSTRTAYMDLRSLRSE-DTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPSVSKG 152 (280)
T ss_dssp TTTTEEEEEECSCCST-TCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSEEEEC
T ss_pred CCCCEEEEEECCCChh-hCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCcEEEe
Confidence 5677889999999999 9999999998741 0012233345666654 11 13334333347889
Q ss_pred CCCcEEEEEEcCCCCC-CCeEEEEec
Q psy5866 73 EGRAIELVCSTSGGSP-DPQISVTLQ 97 (98)
Q Consensus 73 ~g~~~~l~C~~~~~~p-~~~~~W~~~ 97 (98)
+|+++.|.|.+....+ .+.+.|+++
T Consensus 153 ~G~~v~L~C~~~~~~~~~~~v~W~r~ 178 (280)
T 3fku_X 153 LRQTATLTCTGNSNNVGNQGAAWLQQ 178 (280)
T ss_dssp TTCCEEEEEECCCCCCCTTCCEEEEE
T ss_pred cCCCEEEEEEecCCCCCCceEEEEEE
Confidence 9999999999875344 478999985
No 134
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.27 E-value=6.2e-13 Score=80.72 Aligned_cols=82 Identities=12% Similarity=0.148 Sum_probs=48.5
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeC-CCCceecCCCcEEEEEEcCCCCCCC-
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISP-GANPVATEGRAIELVCSTSGGSPDP- 90 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~-~~~~~~~~g~~~~l~C~~~~~~p~~- 90 (98)
.+.++|+|.+++.+ |+|.|+|.+.+... ........|.|...+.+|.+.. .+.....+|+.+.|.|.+.++.|.+
T Consensus 90 ~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~--~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~ 166 (233)
T 3bqu_C 90 GTDFVFTIENMLSE-DVADYYCLQSDNLP--YTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDI 166 (233)
T ss_dssp EEEEEEC-----CC-CCSEEEEEECSSSS--CCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCE
T ss_pred CCEEEEEECCCCHH-HCEEEEEEEecCCc--eeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCce
Confidence 34568999999999 99999999987422 1112223466655444555521 1333445789999999997545654
Q ss_pred eEEEEec
Q psy5866 91 QISVTLQ 97 (98)
Q Consensus 91 ~~~W~~~ 97 (98)
.+.|+++
T Consensus 167 ~v~W~k~ 173 (233)
T 3bqu_C 167 NVKWKID 173 (233)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 7999975
No 135
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.26 E-value=2.1e-11 Score=75.44 Aligned_cols=87 Identities=22% Similarity=0.282 Sum_probs=55.4
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECCC-------------C------CeeeEeeEEEEEE-CCCCCCEEe-CCCC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAGS-------------G------QDLHSQVYTVTVL-TPPQPPKIS-PGAN 68 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~-------------~------~~~~~~~~~l~v~-~~~~~p~i~-~~~~ 68 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+... + .........+.|. ..+..|.+. ..+.
T Consensus 72 ~~~~~~~sL~I~~v~~~-DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~ 150 (248)
T 3u2s_H 72 DNSKDTLYLQMNSLRVE-DTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPS 150 (248)
T ss_dssp EGGGTEEEEEECSCCGG-GCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC
T ss_pred cCCCCEEEEEECCCCHH-HCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCC
Confidence 34467889999999999 99999999986210 0 1122233567776 444556553 2233
Q ss_pred ceecCCCcEEEEEEcCCCCC-CCeEEEEec
Q psy5866 69 PVATEGRAIELVCSTSGGSP-DPQISVTLQ 97 (98)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~ 97 (98)
.....|..+.|.|.+.+..| .+.+.|+++
T Consensus 151 ~~~~~g~~~~L~C~~~~~~P~~~~v~W~~~ 180 (248)
T 3u2s_H 151 SKSTSGGTAALGCLVKDYFPEPVTVSWNSG 180 (248)
T ss_dssp ------CEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred ccccCCCcEEEEEEEeeEECCCeEEEEeEC
Confidence 45567999999999986677 567999764
No 136
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.26 E-value=2.3e-11 Score=74.57 Aligned_cols=86 Identities=19% Similarity=0.208 Sum_probs=56.8
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCCC----------CeeeEeeEEEEEE-CCCCCCEEe-CCCCceecCCCcEE
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSG----------QDLHSQVYTVTVL-TPPQPPKIS-PGANPVATEGRAIE 78 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~----------~~~~~~~~~l~v~-~~~~~p~i~-~~~~~~~~~g~~~~ 78 (98)
...+.++|+|.+++.+ |+|.|.|.+.+.... .........+.|. .++..|.+. ..+...+..|+.+.
T Consensus 81 ~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~ 159 (239)
T 3tv3_H 81 TPKNLVFLKLNSVTAA-DTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAA 159 (239)
T ss_dssp GGGTEEEEEECSCCGG-GCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEE
T ss_pred CCCCEEEEEECCCChh-hCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEE
Confidence 4467889999999999 999999999863100 0112233466775 344556553 22344566799999
Q ss_pred EEEEcCCCCCCC-eEEEEec
Q psy5866 79 LVCSTSGGSPDP-QISVTLQ 97 (98)
Q Consensus 79 l~C~~~~~~p~~-~~~W~~~ 97 (98)
|.|.+.++.|.+ .+.|+++
T Consensus 160 l~C~~~~~~p~~~~v~W~~~ 179 (239)
T 3tv3_H 160 LGCLVKDYFPEPVTVSWNSG 179 (239)
T ss_dssp EEEEEEEEBSSCCEEEEGGG
T ss_pred EEEEEeeEeCCCeEEEEEEC
Confidence 999998667755 5899764
No 137
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.26 E-value=3.6e-11 Score=78.62 Aligned_cols=86 Identities=20% Similarity=0.296 Sum_probs=58.7
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCCC--CeeeEeeEEEEEEC-CCCCCEE-eCCCCceecCCCcEEEEEEcCCC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSG--QDLHSQVYTVTVLT-PPQPPKI-SPGANPVATEGRAIELVCSTSGG 86 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~--~~~~~~~~~l~v~~-~~~~p~i-~~~~~~~~~~g~~~~l~C~~~~~ 86 (98)
...+.++|.|.+++.+ |+|.|+|.+.+.... .........+.|.. ++.+|.+ ...+...+.+|+.+.|.|.+.+.
T Consensus 292 ~~~~~~~L~I~~v~~~-D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~ 370 (438)
T 1qgc_4 292 NAKNTLYLQMSSLRSA-DTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGY 370 (438)
T ss_dssp TTTTEEEEEECSCCGG-GCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEESC
T ss_pred cCCCeEEEEECCCChh-hCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEeccc
Confidence 3456779999999999 999999999973221 11222345677763 2344544 22234567789999999999744
Q ss_pred CCCC-eEEEEec
Q psy5866 87 SPDP-QISVTLQ 97 (98)
Q Consensus 87 ~p~~-~~~W~~~ 97 (98)
.|.+ .+.|+++
T Consensus 371 ~P~~~~v~W~~~ 382 (438)
T 1qgc_4 371 FPEPVTVTWNSG 382 (438)
T ss_dssp BSSCCEEEEGGG
T ss_pred cCCCcEEEEecC
Confidence 4877 9999864
No 138
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.26 E-value=6.4e-12 Score=75.31 Aligned_cols=76 Identities=14% Similarity=0.255 Sum_probs=53.5
Q ss_pred EEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEEec
Q psy5866 18 LIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 18 l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
|.|.+++.. |+|.|+|.+.+..+ ...+..+.+.|...+....+. .....+.+|+.+.|.|.+..+.|.+.+.|+++
T Consensus 71 l~i~~v~~~-d~G~Y~C~~~n~~g--~~~~~~~~l~v~~~~~~~~~~-~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~ 146 (217)
T 2vr9_A 71 RTMQGKKEQ-DGGEYWCVAKNRVG--QAVSRHASLQIAVLRDDFRVE-PKDTRVAKGETALLECGPPKGIPEPTLIWIKD 146 (217)
T ss_dssp SCCBSSSCB-CCEEEEEEEEETTE--EEECCCEEEEECEECCSCSBC-CCCEEECTTSCEEECCBCCCEESCCEEEEEET
T ss_pred EEeccCCcc-cCceEEEEEecCCC--ccccccceEEEEEeCCCcEEC-CCccEEcCCCeEEEEEECCCCCCCCeEEEEEC
Confidence 478899999 99999999998521 222334555554322222222 24567889999999999856899999999975
No 139
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.26 E-value=1.9e-11 Score=71.74 Aligned_cols=71 Identities=18% Similarity=0.388 Sum_probs=53.5
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCe
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQ 91 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 91 (98)
..+.++|.|.+++.+ |+|.|+|.+.+. . ..+.|.|... .. .....+.+|+.+.|.|.+. +.|.|.
T Consensus 64 ~~~~~~L~i~~v~~~-D~G~Y~C~~~~~-----~--~~~~l~V~~~----~~--~~~~~v~~g~~~~l~C~~~-~~p~~~ 128 (184)
T 2ny1_B 64 DQGNFPLIIKNLKIE-DSDTYICEVEDQ-----K--EEVQLLVFGL----TA--NSDTHLLQGQSLTLTLESP-PGSSPS 128 (184)
T ss_dssp GGTBCCEEECSCCGG-GCEEEEEEETTE-----E--EEEEEEEEEE----EE--SSCSEEETTCCEEEEEECC-TTCCCE
T ss_pred cCCeEEEEEecCCHH-HCEEEEEEEEcC-----C--CcEEEEEEEe----cC--CCCceeecCCCEEEEEEcC-CCCCCE
Confidence 345677999999999 999999999763 1 2445666421 12 2345788999999999986 578999
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|+++
T Consensus 129 v~W~~~ 134 (184)
T 2ny1_B 129 VQCRSP 134 (184)
T ss_dssp EEEECT
T ss_pred EEEEeC
Confidence 999875
No 140
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.26 E-value=3.5e-11 Score=79.47 Aligned_cols=86 Identities=16% Similarity=0.162 Sum_probs=59.1
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCC--------CC-eeeEeeEEEEEECC-CCCCEEe-CCCCceecCCCcEEE
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGS--------GQ-DLHSQVYTVTVLTP-PQPPKIS-PGANPVATEGRAIEL 79 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~--------~~-~~~~~~~~l~v~~~-~~~p~i~-~~~~~~~~~g~~~~l 79 (98)
...+.++|+|.+++.+ |+|.|+|.+.+..+ .. ........|.|... +.+|.+. ......+.+|+.+.|
T Consensus 74 ~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L 152 (457)
T 1hzh_H 74 TSANTAYMELRSLRSA-DTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAAL 152 (457)
T ss_dssp TTTTEEEEEECSCCGG-GCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEE
T ss_pred CCCCEEEEEECCCCcc-cCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEE
Confidence 3456789999999999 99999999987532 00 02223456777642 2345442 123345689999999
Q ss_pred EEEcCCCCCC-CeEEEEec
Q psy5866 80 VCSTSGGSPD-PQISVTLQ 97 (98)
Q Consensus 80 ~C~~~~~~p~-~~~~W~~~ 97 (98)
.|.+.+..|. +.+.|+++
T Consensus 153 ~C~~~g~~P~~~~v~W~k~ 171 (457)
T 1hzh_H 153 GCLVKDYFPEPVTVSWNSG 171 (457)
T ss_dssp EEEEESBBSCCCEEEETTT
T ss_pred EEEEeEEeCCCeEEEEEeC
Confidence 9999755575 89999864
No 141
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.25 E-value=5.3e-12 Score=83.39 Aligned_cols=73 Identities=14% Similarity=0.132 Sum_probs=56.6
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeC-CCCceecCCCcEEEEEEcCCCCCCCeEEE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISP-GANPVATEGRAIELVCSTSGGSPDPQISV 94 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W 94 (98)
.+|.|.+++.+ |+|.|+|.+.| . .+..+.|.|..+|.. .+.+ .....+.+|+.+.|.|.+. |.|.|.+.|
T Consensus 290 ~~L~I~~v~~~-D~G~Y~C~A~N----~--~~~~~~L~V~~~p~i-~~~~~~~~~~v~~G~~v~l~C~~~-g~P~p~i~W 360 (423)
T 3qs7_E 290 LFAFVSSVARN-DTGYYTCSSSK----H--PSQSALVTIVEKGFI-NATNSSEDYEIDQYEEFCFSVRFK-AYPQIRCTW 360 (423)
T ss_dssp EEEEESSCCTT-TCEEEEEEETT----E--EEEEEEEEEESSCEE-EEC---CEECCCTTCCCCEEEEEE-EESCCEEEE
T ss_pred EEEEEeecCHH-HCEEEEEEEec----C--CCceEEEEEEeCCcc-eEcCCCccEEecCCCeEEEEEEEE-EcCCCeEEE
Confidence 46999999999 99999999987 2 666778888755432 2211 1345678899999999985 789999999
Q ss_pred Eec
Q psy5866 95 TLQ 97 (98)
Q Consensus 95 ~~~ 97 (98)
+++
T Consensus 361 ~k~ 363 (423)
T 3qs7_E 361 TFS 363 (423)
T ss_dssp EET
T ss_pred EEC
Confidence 975
No 142
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.25 E-value=4.5e-11 Score=75.26 Aligned_cols=84 Identities=21% Similarity=0.209 Sum_probs=56.7
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCC--CeeeEeeEEEEEECC-----------C--CCCEEeC-CCCceecCCC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSG--QDLHSQVYTVTVLTP-----------P--QPPKISP-GANPVATEGR 75 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~--~~~~~~~~~l~v~~~-----------~--~~p~i~~-~~~~~~~~g~ 75 (98)
..+.++|+|.+++.+ |+|.|+|.+.+...+ .........|.|..+ + ..+.+.. .....+.+|+
T Consensus 97 ~~~~~sL~I~~v~~~-DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~ 175 (291)
T 2gki_A 97 SSSTAYMELSSLTSE-DSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGE 175 (291)
T ss_dssp GGTEEEEEECSCCGG-GCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTS
T ss_pred CCCEEEEEECcCCHH-HCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCC
Confidence 345789999999999 999999999875211 111223356777641 1 1233432 2345789999
Q ss_pred cEEEEEEcCCCCCCC------eEEEEec
Q psy5866 76 AIELVCSTSGGSPDP------QISVTLQ 97 (98)
Q Consensus 76 ~~~l~C~~~~~~p~~------~~~W~~~ 97 (98)
++.|.|.+. +.|.+ .+.|+++
T Consensus 176 ~v~L~C~~~-~~~~~~~~~~~~v~W~k~ 202 (291)
T 2gki_A 176 KVTMSCKSS-QSLFNSRTRKNYLAWYQQ 202 (291)
T ss_dssp CEEEEEEES-SCCEETTTTEECEEEEEE
T ss_pred cEEEEEEcC-CccccccccceeEEEEEE
Confidence 999999986 45554 8999986
No 143
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.25 E-value=3.4e-11 Score=75.07 Aligned_cols=85 Identities=15% Similarity=0.175 Sum_probs=54.6
Q ss_pred EeCCCCeEEEEEccceeeccCeEEEEEEEECCCC-----CeeeEeeEEEEEEC-CCCCCEEe-CCCCceecCCCcEEEEE
Q psy5866 9 YRPDSGRYDLIISNASFERDNGKFECRLKAAGSG-----QDLHSQVYTVTVLT-PPQPPKIS-PGANPVATEGRAIELVC 81 (98)
Q Consensus 9 ~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~-----~~~~~~~~~l~v~~-~~~~p~i~-~~~~~~~~~g~~~~l~C 81 (98)
.+...+.++|+|.+++.+ |+|.|.|.+.+...+ .........|.|.. ++.+|.+. ......+.+|..+.|.|
T Consensus 71 ~~~~~~~~sL~I~~v~~~-DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C 149 (263)
T 3iu4_H 71 KDNSKSQVFLKMNSLQTD-DTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSGTAALGC 149 (263)
T ss_dssp EEGGGTEEEEEECSCCGG-GCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----EEEEEE
T ss_pred ecCCCCEEEEEECCCCHH-HCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCCcEEEEE
Confidence 344567889999999999 999999999874200 11222334677753 34455553 22334456889999999
Q ss_pred EcCCCCCC-CeEEE
Q psy5866 82 STSGGSPD-PQISV 94 (98)
Q Consensus 82 ~~~~~~p~-~~~~W 94 (98)
.+.++.|. +.+.|
T Consensus 150 ~~~~~~P~~~~v~W 163 (263)
T 3iu4_H 150 LVKDYFPEPVTVSW 163 (263)
T ss_dssp EEEEEBSSCCEEEE
T ss_pred EEEeEeCCceEEEE
Confidence 99876774 78999
No 144
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.25 E-value=6e-12 Score=73.73 Aligned_cols=78 Identities=27% Similarity=0.428 Sum_probs=54.1
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEEe
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVTL 96 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~ 96 (98)
+|.|.+++.+ |+|.|+|.+.+... .......+.+.|..+|............+.+|+.+.|.|.+. +.|.+.+.|++
T Consensus 58 ~L~i~~~~~~-d~G~Y~C~~~~~~~-~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~v~W~~ 134 (189)
T 2v5t_A 58 NLQILNINKS-DEGIYRCEGRVEAR-GEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRAS-GSPEPAISWFR 134 (189)
T ss_dssp CEEETTCCGG-GCEEEEEEEEETTT-TEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEE-EESCCEEEEEE
T ss_pred CEEEeeCCHh-HCcEEEEEEEEcCC-CceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEc-cCCCCeEEEEE
Confidence 5999999999 99999999998643 233334455665543321110100134677899999999995 67899999997
Q ss_pred c
Q psy5866 97 Q 97 (98)
Q Consensus 97 ~ 97 (98)
+
T Consensus 135 ~ 135 (189)
T 2v5t_A 135 N 135 (189)
T ss_dssp T
T ss_pred C
Confidence 5
No 145
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.25 E-value=2.2e-11 Score=78.45 Aligned_cols=74 Identities=30% Similarity=0.452 Sum_probs=58.2
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEEe
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVTL 96 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~ 96 (98)
+|.|.+++.+ |+|.|+|.+.+. ....+..+.|.|..+|.. .+.+ ....+.+|+.+.|.|.+. |.|.|.+.|++
T Consensus 271 ~L~i~~v~~~-d~G~Y~C~a~n~---~g~~~~~~~l~V~~~p~~-~~~~-~~~~v~~g~~~~l~C~~~-g~p~p~i~W~~ 343 (388)
T 2v5m_A 271 TLIIKDAVVE-DSGKYLCVVNNS---VGGESVETVLTVTAPLSA-KIDP-PTQTVDFGRPAVFTCQYT-GNPIKTVSWMK 343 (388)
T ss_dssp EEEESSCCGG-GCEEEEEEEECS---SCEEEEEEEEEEEEEEEE-EEES-SEEEECTTSCEEEEEEEE-EECCCEEEEEE
T ss_pred EEEECcCCHH-HCeEEEEEEecC---CCceeEEEEEEEeCCCcc-ccCC-CcEEecCCCCEEEEEEec-cccCCeEEEEE
Confidence 6999999999 999999999985 344566677887654432 2232 456788999999999985 78999999997
Q ss_pred c
Q psy5866 97 Q 97 (98)
Q Consensus 97 ~ 97 (98)
+
T Consensus 344 ~ 344 (388)
T 2v5m_A 344 D 344 (388)
T ss_dssp T
T ss_pred C
Confidence 5
No 146
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.24 E-value=1.2e-10 Score=79.65 Aligned_cols=78 Identities=26% Similarity=0.423 Sum_probs=62.7
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISV 94 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W 94 (98)
...|.|.+++.+ |+|.|+|.+.+..+ ...+..+.|.|..+|..+.+.+ ....+.+|+.+.|.|.+ .|.|.+.+.|
T Consensus 163 ~~~L~i~~~~~~-d~G~Y~C~a~n~~~--~~~s~~~~l~V~~~p~~~~~~~-~~~~~~~G~~~~l~C~~-~g~p~~~i~W 237 (642)
T 1e07_A 163 NRTLTLFNVTRN-DTASYKCETQNPVS--ARRSDSVILNVLYGPDAPTISP-LNTSYRSGENLNLSCHA-ASNPPAQYSW 237 (642)
T ss_pred CCEEEEeCCCcc-cCeeEEEEEecCCC--CcccceEEEEEEeCCCCcEEec-CCcccccCCEEEEEEEc-CCCCCcEEEE
Confidence 357999999999 99999999998533 2334557888887777777754 45678899999999998 5899999999
Q ss_pred Eec
Q psy5866 95 TLQ 97 (98)
Q Consensus 95 ~~~ 97 (98)
+++
T Consensus 238 ~~~ 240 (642)
T 1e07_A 238 FVN 240 (642)
T ss_pred EEC
Confidence 975
No 147
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.24 E-value=5.1e-11 Score=74.00 Aligned_cols=79 Identities=20% Similarity=0.286 Sum_probs=59.9
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQI 92 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 92 (98)
.+..+|.|.+++.+ |+|.|+|.+.+..+ ...+..+.|.|..+|. .........+.+|+.+.|.|.+. +.|.+.+
T Consensus 59 ~~~~~L~i~~~~~~-D~G~Y~C~~~n~~g--~~~~~~~~l~v~~~~~--~~~~~~~~~~~~g~~v~l~C~~~-~~p~~~v 132 (291)
T 1qz1_A 59 DDSSTLTIYNANID-DAGIYKCVVTAEDG--TQSEATVNVKIFQKLM--FKNAPTPQEFKEGEDAVIVCDVV-SSLPPTI 132 (291)
T ss_dssp TTEEEEEECSCCGG-GCEEEEEEEECTTS--CEEEEEEEEEEECCSE--EEECCSSEEEETTSCEEECCEEE-CSSCCEE
T ss_pred CCeEEEEEecCCCC-CCEEEEEEEEcCCC--CeeEEEEEEEeecccc--ccCCCCcccccCCCeEEEEEEec-cCCCCEE
Confidence 45678999999999 99999999998532 3445567777764432 22222456789999999999986 6788999
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 133 ~W~~~ 137 (291)
T 1qz1_A 133 IWKHK 137 (291)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99975
No 148
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.24 E-value=1.9e-11 Score=76.50 Aligned_cols=81 Identities=22% Similarity=0.304 Sum_probs=60.2
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCC--C-EEeCCCCceecCCCcEEEEEEcCCCCC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQP--P-KISPGANPVATEGRAIELVCSTSGGSP 88 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~--p-~i~~~~~~~~~~g~~~~l~C~~~~~~p 88 (98)
..+..+|.|.+++.+ |+|.|+|.+.+. ....+..+.|.|..+|.. | .+.......+.+|+.+.|.|.+. |.|
T Consensus 58 ~~~~~~L~i~~v~~~-d~G~Y~C~a~n~---~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-g~p 132 (305)
T 2nzi_A 58 KGGYHQLIIASVTDD-DATVYQVRATNQ---GGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFS-GKP 132 (305)
T ss_dssp TTTEEEEEESSCCGG-GCSEEEEEEEET---TEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEE-EES
T ss_pred CCCEEEEEEccCChh-hCeEEEEEEEcC---CCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEEC-CCC
Confidence 456678999999999 999999999985 445566677777543321 1 11111345678899999999985 789
Q ss_pred CCeEEEEec
Q psy5866 89 DPQISVTLQ 97 (98)
Q Consensus 89 ~~~~~W~~~ 97 (98)
.+.+.|+++
T Consensus 133 ~p~i~W~~~ 141 (305)
T 2nzi_A 133 DPVITWQKG 141 (305)
T ss_dssp CCEEEEEES
T ss_pred CCEEEEEEC
Confidence 999999975
No 149
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.24 E-value=4.3e-11 Score=75.08 Aligned_cols=76 Identities=21% Similarity=0.339 Sum_probs=56.8
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeE-eeEEEEEECCCCCCEEe-CCCCceecCCCcEEEEEEcCCCCCCCeEEE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHS-QVYTVTVLTPPQPPKIS-PGANPVATEGRAIELVCSTSGGSPDPQISV 94 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~-~~~~l~v~~~~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W 94 (98)
.|.|.+++.. |+|.|+|.+.+. ..... ....+.|.....+|.+. ......+.+|+.+.|.|.+. |.|.|.+.|
T Consensus 165 ~L~i~~~~~~-d~G~Y~C~a~n~---~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~-g~p~p~v~W 239 (304)
T 2yd9_A 165 ALQIESSEET-DQGKYECVATNS---AGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAV-GSPMPYVKW 239 (304)
T ss_dssp CEEECSCCGG-GCEEEEEEEEET---TEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEE-EESCCEEEE
T ss_pred EEEEccCCcc-cCEEEEEEEEeC---CCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEe-eeCCCEEEE
Confidence 6999999999 999999999985 22222 22566665444455542 22446788999999999985 789999999
Q ss_pred Eec
Q psy5866 95 TLQ 97 (98)
Q Consensus 95 ~~~ 97 (98)
+++
T Consensus 240 ~~~ 242 (304)
T 2yd9_A 240 MQG 242 (304)
T ss_dssp EET
T ss_pred EEC
Confidence 975
No 150
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.24 E-value=7e-11 Score=74.61 Aligned_cols=81 Identities=17% Similarity=0.308 Sum_probs=60.7
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCC--eeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCe
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQ--DLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQ 91 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~--~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 91 (98)
....|.|.+++.+ |+|.|+|.+.+..+.. ...+..+.|.|...+.+|.+...+...+.+|+.+.|.|.+. .|.+.
T Consensus 172 ~~~~L~i~~v~~~-D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~--~~~~~ 248 (316)
T 3vh8_G 172 SKANFSIGPMMLA-LAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSR--SSYDM 248 (316)
T ss_dssp EEEEEEECSCCGG-GCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCSCCCTTSCCEEEEEES--SCCSE
T ss_pred ceEEEEECCCChh-hCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCCeecCCCcEEEEEECC--CCCcE
Confidence 4567999999999 9999999999863311 12255577788766666766433445788999999999985 46789
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|+++
T Consensus 249 ~~W~k~ 254 (316)
T 3vh8_G 249 YHLSRE 254 (316)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 999875
No 151
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.23 E-value=4.1e-11 Score=75.14 Aligned_cols=87 Identities=18% Similarity=0.261 Sum_probs=60.9
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE-----------------CCCCCC-EEeC-C
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL-----------------TPPQPP-KISP-G 66 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~-----------------~~~~~p-~i~~-~ 66 (98)
++......+...|.|.+++.+ |+|.|+|.+.+. .......+.+.|. .....| .+.. .
T Consensus 154 ~~~~~~~~~~~~L~i~~~~~~-d~G~Y~C~a~n~---~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 229 (317)
T 2y25_A 154 RVKTGVTGEQIWLQINEPTPN-DKGKYVMELFDG---KTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLP 229 (317)
T ss_dssp SEEEEECSSEEEEEEESCCGG-GCEEEEEEEECS---SCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCC
T ss_pred CeEEeccCCEEEEEECcCCcc-cCeeEEEEEEeC---CceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCC
Confidence 344444556677999999999 999999999984 3444444555432 111222 3322 2
Q ss_pred CCceecCCCcEEEEEEcCCCCCCCeEEEEec
Q psy5866 67 ANPVATEGRAIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 67 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
....+.+|+.+.|.|.+. |.|.|.+.|+++
T Consensus 230 ~~~~v~~g~~~~l~C~~~-g~p~p~i~W~~~ 259 (317)
T 2y25_A 230 DVVTIQEGKALNLTCNVW-GDPPPEVSWLKN 259 (317)
T ss_dssp SEEEEETTSBBCEEEEEE-CSSCCEEEEEES
T ss_pred ccEEEEcCCEEEEEEEEe-cCCCCEEEEEEC
Confidence 345788999999999986 789999999975
No 152
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.23 E-value=1.4e-10 Score=72.89 Aligned_cols=79 Identities=23% Similarity=0.325 Sum_probs=56.2
Q ss_pred EEEEccceeeccCeEEEEEEE-ECCCCCeeeEeeEEEEEECC--CCCCEEeCCCC--ceecCCCcEEEEEEcCCCCCCCe
Q psy5866 17 DLIISNASFERDNGKFECRLK-AAGSGQDLHSQVYTVTVLTP--PQPPKISPGAN--PVATEGRAIELVCSTSGGSPDPQ 91 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~-~~~~~~~~~~~~~~l~v~~~--~~~p~i~~~~~--~~~~~g~~~~l~C~~~~~~p~~~ 91 (98)
.|.|.+++.+ |+|.|+|.+. +..+........+.+.+..+ +.+|.+..... ..+.+|+.+.|.|.+. |.|.|.
T Consensus 163 ~L~i~~v~~~-d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~-g~P~p~ 240 (315)
T 1itb_B 163 RLIVMNVAEK-HRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVT-GQLSDI 240 (315)
T ss_dssp EEEESSCCGG-GCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEE-ECTTSE
T ss_pred eEEEEeceeh-hCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEe-cCCCCe
Confidence 6999999999 9999999999 54221122233444544432 35566643232 4688999999999996 789999
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|+++
T Consensus 241 i~W~~~ 246 (315)
T 1itb_B 241 AYWKWN 246 (315)
T ss_dssp EEEEET
T ss_pred eEEEEC
Confidence 999974
No 153
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.23 E-value=9.2e-11 Score=70.70 Aligned_cols=80 Identities=23% Similarity=0.294 Sum_probs=59.5
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC------------CCEE-eCCCCceecCCCcEEEE
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ------------PPKI-SPGANPVATEGRAIELV 80 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~------------~p~i-~~~~~~~~~~g~~~~l~ 80 (98)
....|.|.+++.. |+|.|+|.+.+..+ ...+..+.|.|...+. +|.+ .......+.+|+.+.|.
T Consensus 63 ~~~~L~i~~v~~~-d~G~Y~C~~~n~~~--~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~ 139 (218)
T 3k0w_A 63 NTSELIFNAVHVK-DAGFYVCRVNNNFT--FEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQ 139 (218)
T ss_dssp CSSEEEETTCCGG-GCEEEEEEEECTTC--CEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEE
T ss_pred CCCEEEEccCChh-hCeEeEEEEEcCCC--CceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEE
Confidence 3457999999999 99999999998522 2334456777765431 1344 22245678999999999
Q ss_pred EEcCCCCCCCeEEEEec
Q psy5866 81 CSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 81 C~~~~~~p~~~~~W~~~ 97 (98)
|.+ .+.|.+.+.|+++
T Consensus 140 C~~-~g~p~~~v~W~~~ 155 (218)
T 3k0w_A 140 CVA-VGSPIPHYQWFKN 155 (218)
T ss_dssp CEE-EBSSCCEEEEEET
T ss_pred EEe-cccCCCeEEEEEC
Confidence 999 4789999999975
No 154
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.23 E-value=1.8e-11 Score=75.44 Aligned_cols=84 Identities=18% Similarity=0.277 Sum_probs=56.1
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC---CCCCEEe--CCCCceecCCCcEEEEEEcCCCC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP---PQPPKIS--PGANPVATEGRAIELVCSTSGGS 87 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~---~~~p~i~--~~~~~~~~~g~~~~l~C~~~~~~ 87 (98)
.+.++|+|.+++.+ |+|.|+|.+.+.............|.|... +.+|.+. ......+.+|+.+.|.|.+.+..
T Consensus 73 ~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~ 151 (252)
T 1oga_E 73 KESFPLTVTSAQKN-PTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFY 151 (252)
T ss_dssp TTBCCEEECSCCSC-CCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEB
T ss_pred CCEEEEEECcCChh-hCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEc
Confidence 45678999999999 999999999874111112223346777642 2455542 11223455789999999997556
Q ss_pred CC-CeEEEEec
Q psy5866 88 PD-PQISVTLQ 97 (98)
Q Consensus 88 p~-~~~~W~~~ 97 (98)
|. +.+.|+++
T Consensus 152 P~~~~v~W~~~ 162 (252)
T 1oga_E 152 PDHVELSWWVN 162 (252)
T ss_dssp SSCEEEEEEET
T ss_pred CCCcEEEEEEC
Confidence 75 48999975
No 155
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.22 E-value=1.8e-10 Score=73.26 Aligned_cols=79 Identities=22% Similarity=0.340 Sum_probs=58.7
Q ss_pred EEEEEccceeeccCeEEEEEEEEC--CCCC-eeeEeeEEEEEECCCCC--CEEeCCCCceecCCCcEEEEEEcCCCCC--
Q psy5866 16 YDLIISNASFERDNGKFECRLKAA--GSGQ-DLHSQVYTVTVLTPPQP--PKISPGANPVATEGRAIELVCSTSGGSP-- 88 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~--~~~~-~~~~~~~~l~v~~~~~~--p~i~~~~~~~~~~g~~~~l~C~~~~~~p-- 88 (98)
..|.|.+++.+ |+|.|+|.+.+. .++. ...+..+.|.|..++.. |.+ ......+.+|+.+.|.|.+. +.|
T Consensus 182 ~~L~I~~v~~~-D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~-~~~~~~v~~G~~~~l~C~~~-g~p~~ 258 (329)
T 3oq3_B 182 QNLIIHNPELE-DSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI-LDPKINVTIGEPANITCTAV-STSLL 258 (329)
T ss_dssp TEEEECSCCGG-GCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE-CCSEEEECTTSCEEEEEEEE-ETTCC
T ss_pred CEEEEeecChh-hCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee-cCCeeEEecCCCEEEEEEEE-ECCCC
Confidence 46999999999 999999999984 2222 33344577888766543 445 33557889999999999997 555
Q ss_pred -CC-eEEEEec
Q psy5866 89 -DP-QISVTLQ 97 (98)
Q Consensus 89 -~~-~~~W~~~ 97 (98)
.+ .+.|+++
T Consensus 259 ~~~i~v~W~~~ 269 (329)
T 3oq3_B 259 VDDVLIDWENP 269 (329)
T ss_dssp TTCCEEEEECT
T ss_pred CCCcEEEEEEC
Confidence 67 8899875
No 156
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.22 E-value=8e-12 Score=77.69 Aligned_cols=84 Identities=19% Similarity=0.237 Sum_probs=59.8
Q ss_pred EeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCC
Q psy5866 9 YRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSP 88 (98)
Q Consensus 9 ~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p 88 (98)
........+|.|.+++.. |+|.|+|.+.+.. ...+..+.|.|..++...... .....+.+|+.+.|.|.+.+..+
T Consensus 44 ~~~~~~~~~L~i~~~~~~-d~G~Y~C~~~n~~---~~~~~~~~l~V~~~~~~~~~~-~~~~~v~~g~~v~l~C~~~~~~~ 118 (292)
T 4dkd_C 44 LYSDGSSSILSTNNATFQ-NTGTYRCTEPGDP---LGGSAAIHLYVKDPARPWNVL-AQEVVVFEDQDALLPCLLTDPVL 118 (292)
T ss_dssp ECCBTTEEEEEESSCCGG-GCSCEEECCCC-------CCEEECCEECCSSCCEEES-CSEEEEETTSCEECCEEESSGGG
T ss_pred EeccCceEEEEEcccccc-cCEEEEEEEccCC---CCcceEEEEEEcCcccccccc-CCeEEEcCCCcEEEeeeCCCCCc
Confidence 344455678999999999 9999999998742 333566777887655433333 35678899999999999974332
Q ss_pred CCeEEEEec
Q psy5866 89 DPQISVTLQ 97 (98)
Q Consensus 89 ~~~~~W~~~ 97 (98)
.+.+.|+++
T Consensus 119 ~~~v~W~~~ 127 (292)
T 4dkd_C 119 EAGVSLVRV 127 (292)
T ss_dssp GSSEEEEEG
T ss_pred ceeEEEEec
Confidence 378999874
No 157
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.22 E-value=1.1e-10 Score=79.79 Aligned_cols=77 Identities=16% Similarity=0.182 Sum_probs=60.8
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVT 95 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~ 95 (98)
.+|+|.+++.+ |+|.|+|.+.+.. .......+.|.|..++..|.+.......+.+|+.+.|.|.+. + |.+.+.|+
T Consensus 71 ~sL~I~~v~~~-D~G~Y~C~~~~~~--~~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~-~-p~~~v~W~ 145 (642)
T 1e07_A 71 ASLLIQNIIQN-DTGFYTLHVIKSD--LVNEEATGQFRVYPELPKPSISSNNSKPVEDKDAVAFTCEPE-T-QDATYLWW 145 (642)
T ss_pred CcEEECCCCcc-cCcEEEEEEEcCC--CeEEEEEEEEEecccCCCCcEEccCceeEecCCcEEEEEECC-C-CCeeEEEE
Confidence 47999999999 9999999998742 233355677888877777777543445788899999999986 4 88999998
Q ss_pred ec
Q psy5866 96 LQ 97 (98)
Q Consensus 96 ~~ 97 (98)
++
T Consensus 146 ~~ 147 (642)
T 1e07_A 146 VN 147 (642)
T ss_pred EC
Confidence 74
No 158
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.22 E-value=2.6e-11 Score=74.74 Aligned_cols=90 Identities=20% Similarity=0.218 Sum_probs=58.0
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCC---CCeeeEeeEEEEEECC---CCCCEEe--CCCCceecCCCcE
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGS---GQDLHSQVYTVTVLTP---PQPPKIS--PGANPVATEGRAI 77 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~---~~~~~~~~~~l~v~~~---~~~p~i~--~~~~~~~~~g~~~ 77 (98)
|+.+....... |+|.+++.+ |+|.|+|.+.+... ..........|.|... ..+|.+. ......+.+|..+
T Consensus 65 R~~~~~~~~~~-L~I~~v~~~-DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~ 142 (253)
T 3to4_D 65 DYLATRVTDTE-LRLQVANMS-QGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKA 142 (253)
T ss_dssp EEEEECCSSSC-CEEEEESCS-SCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEE
T ss_pred cEEEEeCCCCe-EEEccCChh-hCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCce
Confidence 55554444334 999999999 99999999986422 1123333456777642 2344442 1122234456889
Q ss_pred EEEEEcCCCCCCC-eEEEEec
Q psy5866 78 ELVCSTSGGSPDP-QISVTLQ 97 (98)
Q Consensus 78 ~l~C~~~~~~p~~-~~~W~~~ 97 (98)
.|.|.+.+..|.+ .+.|+++
T Consensus 143 ~L~C~~~g~~P~~i~v~W~k~ 163 (253)
T 3to4_D 143 TLVCLATGFYPDHVELSWWVN 163 (253)
T ss_dssp EEEEEEEEEBSSCEEEEEEET
T ss_pred EEEEEEceEECCcEEEEEEEC
Confidence 9999998667777 8999875
No 159
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.22 E-value=3.3e-11 Score=74.77 Aligned_cols=81 Identities=20% Similarity=0.266 Sum_probs=58.1
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPD 89 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~ 89 (98)
....+..+|+|.+++.. |+|.|+|.+.+. ....+..+.|.|..++.+ .........+.+|+.+.|.|.+.+ .+.
T Consensus 45 ~~~~~~~~L~i~~~~~~-d~G~Y~C~~~~~---~~~~~~~~~l~V~~~~~~-~~~~~~~~~v~~g~~v~L~C~~~~-~~~ 118 (289)
T 3ejj_X 45 DPESPGSTLTTRNATFK-NTGTYRCTELED---PMAGSTTIHLYVKDPAHS-WNLLAQEVTVVEGQEAVLPCLITD-PAL 118 (289)
T ss_dssp CCCSSCCEEEESSCCGG-GCEEEEEECCC--------CEEEEEEECCSSCS-EEESCSEEEEETTSCEEECEEESC-GGG
T ss_pred eccCCccEEEEeeeccc-cCEEEEEEEecc---CCcceeEEEEEEeCCCcc-eecccceEEEecCCceEeEEEccC-CCc
Confidence 34445578999999999 999999998874 233566678888766554 333335678999999999999974 444
Q ss_pred C-eEEEEe
Q psy5866 90 P-QISVTL 96 (98)
Q Consensus 90 ~-~~~W~~ 96 (98)
+ .+.|++
T Consensus 119 ~~~v~W~~ 126 (289)
T 3ejj_X 119 KDSVSLMR 126 (289)
T ss_dssp GGSEEEEE
T ss_pred ceEEEEEe
Confidence 4 499985
No 160
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.22 E-value=4.2e-11 Score=77.32 Aligned_cols=75 Identities=25% Similarity=0.401 Sum_probs=58.6
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVT 95 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~ 95 (98)
.+|.|.+++.+ |+|.|+|.+.+. ....+..+.|.|..+|. .+.......+.+|+.+.|.|.+. |.|.|.+.|+
T Consensus 275 ~~L~i~~~~~~-d~G~Y~C~a~n~---~g~~~~~~~l~V~~~p~--~~~~~~~~~v~~g~~~~l~C~~~-g~p~p~v~W~ 347 (404)
T 3p3y_A 275 KALRITNVSEE-DSGEYFCLASNK---MGSIRHTISVRVKAAPY--WLDEPKNLILAPGEDGRLVCRAN-GNPKPTVQWM 347 (404)
T ss_dssp TEEEESSCCGG-GCEEEEEEEECS---SCEEEEEEEEEEEEEEE--EEECCCCEEECTTCCEEEECEEE-EESCCEEEEE
T ss_pred ceEEEccCCHh-HCEEEEEEEEeC---CCcEEEEEEEEEeCCCe--eeccCCcceeecCCcEEEEEEcc-ccCCCceEEE
Confidence 36999999999 999999999985 34455667777764432 22333457788999999999985 7899999999
Q ss_pred ec
Q psy5866 96 LQ 97 (98)
Q Consensus 96 ~~ 97 (98)
++
T Consensus 348 ~~ 349 (404)
T 3p3y_A 348 VN 349 (404)
T ss_dssp ET
T ss_pred EC
Confidence 75
No 161
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.22 E-value=8.6e-11 Score=72.64 Aligned_cols=85 Identities=19% Similarity=0.178 Sum_probs=54.8
Q ss_pred EeCCCCeEEEEEccceeeccCeEEEEEEEECCC--------CCeeeEeeEEEEEEC-CCCCCEEe-CCCCceecCCCcEE
Q psy5866 9 YRPDSGRYDLIISNASFERDNGKFECRLKAAGS--------GQDLHSQVYTVTVLT-PPQPPKIS-PGANPVATEGRAIE 78 (98)
Q Consensus 9 ~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~--------~~~~~~~~~~l~v~~-~~~~p~i~-~~~~~~~~~g~~~~ 78 (98)
.+...+.++|+|.+++.+ |+|.|.|.+.+... ..........+.|.. ++.+|.+. ..+...+.+|+.+.
T Consensus 95 ~~~~~~~~sL~I~~v~~~-DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~ 173 (256)
T 3sob_H 95 ADTSKNTAYLQMNSLRAE-DTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAA 173 (256)
T ss_dssp EEGGGTEEEEEECSCCGG-GCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----TTEEE
T ss_pred EeCCCCEEEEEECCCCcc-cCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccccCCcEE
Confidence 344567889999999999 99999999986310 011233345677753 33455553 22334567899999
Q ss_pred EEEEcCCCCC-CCeEEE
Q psy5866 79 LVCSTSGGSP-DPQISV 94 (98)
Q Consensus 79 l~C~~~~~~p-~~~~~W 94 (98)
|.|.+.++.| .+.+.|
T Consensus 174 L~C~~~~~~p~~~~v~W 190 (256)
T 3sob_H 174 LGCLVKDYFPEPVTVSW 190 (256)
T ss_dssp EEEEEEEEBSSCCEEEE
T ss_pred EEEEEEEEECCCeEEEE
Confidence 9999986666 457899
No 162
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.21 E-value=6e-11 Score=73.67 Aligned_cols=78 Identities=27% Similarity=0.428 Sum_probs=56.2
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEEe
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVTL 96 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~ 96 (98)
+|.|.+++.. |+|.|+|.+.+... .......+.+.|..+|............+.+|+.+.|.|.+. |.|.|.+.|++
T Consensus 154 ~L~i~~v~~~-d~G~Y~C~~~n~~~-~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~v~W~~ 230 (291)
T 2wim_A 154 NLQILNINKS-DEGIYRCEGRVEAR-GEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRAS-GSPEPAISWFR 230 (291)
T ss_dssp CEEETTCCGG-GCEEEEEEEEETTT-TEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCC-CBSCCEEEEEE
T ss_pred CEEEEecchh-hCEEEEEEEEECCC-CeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEee-cCCCCeEEEEE
Confidence 5999999999 99999999998643 233344566666655543211111134678899999999985 78999999997
Q ss_pred c
Q psy5866 97 Q 97 (98)
Q Consensus 97 ~ 97 (98)
+
T Consensus 231 ~ 231 (291)
T 2wim_A 231 N 231 (291)
T ss_dssp T
T ss_pred C
Confidence 5
No 163
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.21 E-value=5.5e-11 Score=76.52 Aligned_cols=77 Identities=22% Similarity=0.379 Sum_probs=59.9
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEE
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQIS 93 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~ 93 (98)
....|.|.+++.+ |+|.|+|.+.+. .......+.|.|..+|. .+.......+.+|+.+.|.|.+. |.|.|.+.
T Consensus 255 ~~~~L~i~~~~~~-d~G~Y~C~a~n~---~g~~~~~~~l~V~~~p~--~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~v~ 327 (382)
T 1cs6_A 255 SEPLLHIQNVDFE-DEGTYECEAENI---KGRDTYQGRIIIHAQPD--WLDVITDTEADIGSDLRWSCVAS-GKPRPAVR 327 (382)
T ss_dssp SSSEEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEEEEEE--EEECCCCEEEETTCCEEEECEEE-EESCCEEE
T ss_pred CCcEEEEccCChh-hCEEEEEEEEcC---CCeEEEEEEEEEecCCC--cccCCCccEEcCCCeEEEEEEee-eecCCEEE
Confidence 4457999999999 999999999985 44556667777764443 22223456788999999999985 78999999
Q ss_pred EEec
Q psy5866 94 VTLQ 97 (98)
Q Consensus 94 W~~~ 97 (98)
|+++
T Consensus 328 W~~~ 331 (382)
T 1cs6_A 328 WLRD 331 (382)
T ss_dssp EEET
T ss_pred EEEC
Confidence 9975
No 164
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.20 E-value=1.6e-10 Score=69.13 Aligned_cols=77 Identities=21% Similarity=0.344 Sum_probs=60.9
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCC--e
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDP--Q 91 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~--~ 91 (98)
+...+.|++++ . | |.|.|.+... ....+..+.|.|+.+|..+.|.. ....+.+|+.++|+|.+.++.|.+ +
T Consensus 48 ~~~~l~l~~vs-~-~-g~y~C~~~c~---~~~~~~~~~l~V~~~P~~v~i~~-~~~~~~~G~~~tL~C~v~g~~P~~~l~ 120 (185)
T 1iam_A 48 NRKVYELSNVQ-E-D-SQPMCYSNCP---DGQSTAKTFLTVYWTPERVELAP-LPSWQPVGKQLTLRCQVEGGAPRAQLT 120 (185)
T ss_dssp SEEEEEEEEEC-S-C-BCCEEEEECS---SCEEEEECEEEEEBCCSEEEECC-CCSEECTTSEEEEEEEEECCBCGGGEE
T ss_pred ceeEEEEEecC-c-C-CEEEEEEECC---CCceEEEEEEEEeCCCCCCEEcc-CCccccCCCcEEEEEEcCCccCCCCcE
Confidence 33458899996 4 5 9999998763 34677788999999988877764 335699999999999999888875 5
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
++|+++
T Consensus 121 i~w~kg 126 (185)
T 1iam_A 121 VVLLRG 126 (185)
T ss_dssp EEEEET
T ss_pred EEEEeC
Confidence 899975
No 165
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.20 E-value=7.1e-11 Score=74.78 Aligned_cols=79 Identities=23% Similarity=0.421 Sum_probs=61.1
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC-CCCEEeC--CCCceecCCCcEEEEEEcCCCCCC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP-QPPKISP--GANPVATEGRAIELVCSTSGGSPD 89 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~-~~p~i~~--~~~~~~~~g~~~~l~C~~~~~~p~ 89 (98)
.+..+|.|.+++.+ |+|.|+|.+.+. .......+.|.|...+ ..|.+.. .....+.+|+.+.|.|.+. |.|.
T Consensus 177 ~~~~~L~i~~v~~~-d~G~Y~C~a~n~---~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~-g~p~ 251 (334)
T 1ry7_B 177 HQQWSLVMESVVPS-DRGNYTCVVENK---FGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVY-SDAQ 251 (334)
T ss_dssp TTTTEEEECSCCGG-GCCCEEEEEEET---TEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCB-CSSC
T ss_pred cceEEEEECCCCcc-cCEEEEEEEEeC---CCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEe-cCCC
Confidence 34558999999999 999999999985 4555666788887543 3344421 2456788999999999985 7899
Q ss_pred CeEEEEe
Q psy5866 90 PQISVTL 96 (98)
Q Consensus 90 ~~~~W~~ 96 (98)
|.+.|++
T Consensus 252 p~v~W~~ 258 (334)
T 1ry7_B 252 PHIQWLK 258 (334)
T ss_dssp EEEEEEE
T ss_pred CeEEEEE
Confidence 9999998
No 166
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.20 E-value=9.1e-11 Score=69.15 Aligned_cols=80 Identities=23% Similarity=0.387 Sum_probs=56.0
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC----CCCCEE-eCCCCceecCCCcEEEEEEcCCCCCCC
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP----PQPPKI-SPGANPVATEGRAIELVCSTSGGSPDP 90 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~----~~~p~i-~~~~~~~~~~g~~~~l~C~~~~~~p~~ 90 (98)
.+|.|.+++.+ |+|.|+|.+.+...........+.+.+... +.+|.+ .......+.+|+.+.|.|.+. +.|.+
T Consensus 66 ~~L~i~~v~~~-d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p 143 (201)
T 3s97_C 66 GNLYIANVEAS-DKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFAL-GNPVP 143 (201)
T ss_dssp CCEEESSCCGG-GCEEEEEEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEE-EESCC
T ss_pred CeEEECcCCcc-cCeEEEEEEEecCCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEcc-CCCCC
Confidence 46999999999 999999999985332233333345444422 122333 222467788999999999985 78999
Q ss_pred eEEEEec
Q psy5866 91 QISVTLQ 97 (98)
Q Consensus 91 ~~~W~~~ 97 (98)
.+.|+++
T Consensus 144 ~v~W~~~ 150 (201)
T 3s97_C 144 DIRWRKV 150 (201)
T ss_dssp EEEEEET
T ss_pred ceEEEeC
Confidence 9999975
No 167
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.20 E-value=5.3e-11 Score=69.87 Aligned_cols=75 Identities=24% Similarity=0.311 Sum_probs=55.2
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEEe
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVTL 96 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~ 96 (98)
.|.|.+++.. |+|.|+|.+.+..+ ...+....+.|..+|. .........+.+|+.+.|.|.+. +.|.+.+.|++
T Consensus 63 ~L~i~~~~~~-d~G~Y~C~~~~~~~--~~~~~~~~l~v~~~p~--~~~~~~~~~~~~g~~~~l~C~~~-g~p~~~v~W~~ 136 (192)
T 2iep_A 63 LLTILSVEDS-DDGIYCCTANNGVG--GAVESCGALQVKMKPK--ITRPPINVKIIEGLKAVLPCTTM-GNPKPSVSWIK 136 (192)
T ss_dssp EEEESSCCGG-GCEEEEEEEECSSS--CCEEEEEEEEEEEEEE--EEECCCCEEEETTSCEEECCEEE-EESCCEEEEEE
T ss_pred EEEEcCCCcc-cCeEEEEEEEcCCC--ceeEeEEEEEEEeCCc--cccCCcceEEeCCCcEEEEEEEe-ccCCceEEEEe
Confidence 5999999999 99999999998532 2233445666654433 12222456788999999999985 78889999997
Q ss_pred c
Q psy5866 97 Q 97 (98)
Q Consensus 97 ~ 97 (98)
+
T Consensus 137 ~ 137 (192)
T 2iep_A 137 G 137 (192)
T ss_dssp T
T ss_pred C
Confidence 5
No 168
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.19 E-value=2.1e-10 Score=71.19 Aligned_cols=78 Identities=23% Similarity=0.400 Sum_probs=58.4
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC-CCCCEEe-CCCCceecCCCcEEEEEEcCCCCCCCeEEE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP-PQPPKIS-PGANPVATEGRAIELVCSTSGGSPDPQISV 94 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~-~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W 94 (98)
.|.|.+++.+ |+|.|+|.+.+. .....+..+.|.|... +.+|.+. ......+.+|+.+.|.|.+.++.|.+.+.|
T Consensus 145 ~L~i~~v~~~-d~G~Y~C~a~~~--~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W 221 (289)
T 3ejj_X 145 GFIIRKAKVL-DSNTYVCKTMVN--GRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVIL 221 (289)
T ss_dssp EEEESSCCGG-GCEEEEEEEEET--TEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEE
T ss_pred CEEEeecccc-cCEEEEEEEEeC--CCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEE
Confidence 5999999999 999999999853 2345556678888742 2345542 223455679999999999975488999999
Q ss_pred Eec
Q psy5866 95 TLQ 97 (98)
Q Consensus 95 ~~~ 97 (98)
+++
T Consensus 222 ~~~ 224 (289)
T 3ejj_X 222 KRG 224 (289)
T ss_dssp EET
T ss_pred EEC
Confidence 875
No 169
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.19 E-value=6.1e-11 Score=76.62 Aligned_cols=74 Identities=31% Similarity=0.490 Sum_probs=58.6
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEEe
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVTL 96 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~ 96 (98)
+|.|.+++.+ |+|.|+|.+.+. ....+..+.|.|..+|. .+.......+.+|+.+.|.|.+. |.|.|.+.|++
T Consensus 276 ~L~i~~~~~~-d~G~Y~C~a~n~---~g~~~~~~~l~V~~~p~--~~~~~~~~~~~~g~~v~l~C~~~-g~p~p~v~W~~ 348 (403)
T 3laf_A 276 NLLISNVTDD-DSGTYTCVVTYK---NENISASAELTVLVPPW--FLNHPSNLYAYESMDIEFECAVS-GKPVPTVNWMK 348 (403)
T ss_dssp EEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEEEEEE--EEECCCCEECCTTCCEEECCEEE-EESCCEEEEEE
T ss_pred EEEEeCCCHH-HCEEEEEEEEcC---CCceEEEEEEEEECCCc--EeecCcceEEecCCeEEEEEEEe-eccCCEEEEEE
Confidence 6999999999 999999999985 45566677888865443 22223456788999999999985 78999999997
Q ss_pred c
Q psy5866 97 Q 97 (98)
Q Consensus 97 ~ 97 (98)
+
T Consensus 349 ~ 349 (403)
T 3laf_A 349 N 349 (403)
T ss_dssp T
T ss_pred C
Confidence 5
No 170
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.19 E-value=2e-10 Score=77.63 Aligned_cols=79 Identities=14% Similarity=0.266 Sum_probs=58.8
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCC---CCC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSG---GSP 88 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~---~~p 88 (98)
..+.++|+|.+++.+ |+|.|+|.+ +. ....+..+.|.|...+ |.+.......+.+|+.+.|.|.+.. +.|
T Consensus 402 ~~g~~~L~I~~v~~~-D~G~Y~C~a-n~---~g~~~~~~~l~V~~~~--p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~p 474 (585)
T 2ocw_A 402 GNGTFTVILNQLTSR-DAGFYWCLT-NG---DTLWRTTVEIKIIEGE--PNLKVPGNVTAVLGETLKVPCHFPCKFSSYE 474 (585)
T ss_pred CCcEEEEEECCCChh-hCEEEEEcc-cC---CCccceeEEEEEecCc--cccccCCceeEecCCcEEEEEEecCCCCCCc
Confidence 456677999999999 999999988 53 3444556777776443 2332235578999999999999852 677
Q ss_pred CCeEEEEec
Q psy5866 89 DPQISVTLQ 97 (98)
Q Consensus 89 ~~~~~W~~~ 97 (98)
.+.+.|+++
T Consensus 475 ~~~v~W~k~ 483 (585)
T 2ocw_A 475 KYWCKWNNT 483 (585)
T ss_pred cEEEEEeec
Confidence 889999975
No 171
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.19 E-value=1.2e-10 Score=69.38 Aligned_cols=80 Identities=16% Similarity=0.272 Sum_probs=55.4
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQI 92 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 92 (98)
.++++|+|.+++.+ |+|.|+|.+.+.. .........+.+..++..+... .......+....+.|.+..+.|++.+
T Consensus 80 ~~~~sL~I~~v~~~-D~G~Y~C~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~c~~~~~~P~~~~ 154 (225)
T 4fmk_A 80 LRDATLAFRGLRVE-DEGNYTCEFATFP--NGTRRGVTWLRVIAQPENHAEA--QEVTIGPQSVAVARCVSTGGRPPARI 154 (225)
T ss_dssp CCBCCEEECSCCGG-GCEEEEEEEEEET--TEEEEEEEEEEEEBCCEEEEEE--CCBCCSSSCEEEEEEEEEEEBSCCEE
T ss_pred cCcEEEEEccCCHH-HCcceEEEEEeCC--CcceeeeeeeeeecCCceeecc--cceeecceeeeeeeeeecCCCCCCEE
Confidence 45678999999999 9999999998852 2333333445554444332222 33456677778888887778899999
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 155 ~w~~~ 159 (225)
T 4fmk_A 155 TWISS 159 (225)
T ss_dssp EEECS
T ss_pred EEEEC
Confidence 99864
No 172
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.19 E-value=3.2e-11 Score=71.75 Aligned_cols=76 Identities=17% Similarity=0.274 Sum_probs=53.3
Q ss_pred EEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEEec
Q psy5866 18 LIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 18 l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
|.|.+++.. |+|.|+|.+.+..+ ...+..+.|.|...+...... .....+.+|+.+.|.|.+..+.|.+.+.|+++
T Consensus 74 l~i~~~~~~-d~G~Y~C~~~n~~g--~~~~~~~~l~V~~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~ 149 (212)
T 2v9r_A 74 IVHGRKSRP-DEGVYVCVARNYLG--EAVSHDASLEVAILRDDFRQN-PSDVMVAVGEPAVMECQPPRGHPEPTISWKKD 149 (212)
T ss_dssp CCCCSSCCC-SCEEEEEEEEETTE--EEECCCEEEEECEECSSCSBC-CCCEEEETTSCEEEECBCCCEESCCEEEEEET
T ss_pred EEecCCCcc-cCeEEEEEEECCCC--ceeecceEEEEEeccccceeC-CCceEecCCCcEEEEEecCCCCCCCEEEEEEC
Confidence 455678999 99999999998521 222345566665433221222 24567889999999999856889999999975
No 173
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.18 E-value=3e-11 Score=77.85 Aligned_cols=76 Identities=18% Similarity=0.405 Sum_probs=56.8
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCC-ceecCCCcEEEEEEcCCCCCCCeEEE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGAN-PVATEGRAIELVCSTSGGSPDPQISV 94 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~-~~~~~g~~~~l~C~~~~~~p~~~~~W 94 (98)
..|.|.+++.+ |+|.|+|.+.+..+ ...+..+.|.|..+|.. ...... ..+.+|+.+.|.|.+. |.|.|.+.|
T Consensus 270 ~~L~i~~~~~~-d~G~Y~C~a~n~~g--~~~~~~~~l~V~~~P~~--~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~v~W 343 (395)
T 1bih_A 270 KRLLFKTTLPE-DEGVYTCEVDNGVG--KPQKHSLKLTVVSAPKY--EQKPEKVIVVKQGQDVTIPCKVT-GLPAPNVVW 343 (395)
T ss_dssp SEEEESSCCGG-GCEEEEEEECCSSS--SCEEEEEEEEEEEEEEE--EECCCSEEEECTTSCEEEECEEE-EESCCCCEE
T ss_pred ceEEEccCChh-hCEEEEEEEEeCCC--CceEEEEEEEEEcCCcc--ccCCCcceEecCCCeEEEEEEEC-cccCCeeEE
Confidence 37999999999 99999999998532 22333677777644431 222233 5789999999999986 789999999
Q ss_pred Eec
Q psy5866 95 TLQ 97 (98)
Q Consensus 95 ~~~ 97 (98)
+++
T Consensus 344 ~~~ 346 (395)
T 1bih_A 344 SHN 346 (395)
T ss_dssp EET
T ss_pred EEC
Confidence 975
No 174
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.17 E-value=2.8e-11 Score=75.21 Aligned_cols=78 Identities=26% Similarity=0.421 Sum_probs=55.0
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEEe
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVTL 96 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~ 96 (98)
.|.|.+++.. |+|.|+|.+.+... .......+.+.|..+|............+.+|+.+.|.|.+. |.|.|.+.|++
T Consensus 156 ~L~i~~~~~~-d~G~Y~C~a~n~~~-~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~-g~p~p~i~W~~ 232 (291)
T 1qz1_A 156 YLQIRGIKKT-DEGTYRCEGRILAR-GEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDAD-GFPEPTMSWTK 232 (291)
T ss_dssp CEEETTCCGG-GCEEEEEEEEEGGG-TEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEE-EESCCEEEEEE
T ss_pred cEEEccCccc-cCeEEEEEEEecCC-CceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEE-EeCCCcEEEEE
Confidence 6999999999 99999999998532 223344556666544322111111134678999999999986 78999999997
Q ss_pred c
Q psy5866 97 Q 97 (98)
Q Consensus 97 ~ 97 (98)
+
T Consensus 233 ~ 233 (291)
T 1qz1_A 233 D 233 (291)
T ss_dssp T
T ss_pred C
Confidence 5
No 175
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.17 E-value=4.9e-10 Score=68.49 Aligned_cols=77 Identities=22% Similarity=0.308 Sum_probs=58.0
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCC-Ce---
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPD-PQ--- 91 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~-~~--- 91 (98)
..|.|.+++.+ |+|.|+|.+.+. ....+..+.|.|...+.+|.+.......+.+|+.+.|.|.+. +.|. +.
T Consensus 131 ~~l~i~~~~~~-d~G~Y~C~~~n~---~~~~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~-~~p~~p~~~~ 205 (262)
T 3rjd_A 131 SNLTILKTNIS-HNGTYHCSGMGK---HRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETK-LLLQRPGLQL 205 (262)
T ss_dssp CCEEESSCCGG-GCEEEEEEEESS---SEEEEECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEECC-CCCC-----E
T ss_pred CeEEEEECChh-hCEEEEEEEeCC---CCccccceEEEeccCCCCCeEeecCceeecCCCeEEEEeEcc-cCCCCCCccE
Confidence 35899999999 999999999885 456666678888766566666444456788999999999986 5554 43
Q ss_pred -EEEEec
Q psy5866 92 -ISVTLQ 97 (98)
Q Consensus 92 -~~W~~~ 97 (98)
+.|+++
T Consensus 206 ~~~w~~~ 212 (262)
T 3rjd_A 206 YFSFYMG 212 (262)
T ss_dssp EEEEEET
T ss_pred EEEEEeC
Confidence 667654
No 176
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.17 E-value=8e-11 Score=70.82 Aligned_cols=77 Identities=17% Similarity=0.231 Sum_probs=51.1
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEE--eCCCCceecCCCcEEEEEEcCCC-CCCCeEE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKI--SPGANPVATEGRAIELVCSTSGG-SPDPQIS 93 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i--~~~~~~~~~~g~~~~l~C~~~~~-~p~~~~~ 93 (98)
.|.|.+++.+ |+|.|+|.+.+.. ....+..+.|.|.. +..|.+ .+.....+.+|+.+.|.|.+.+. .+.+.+.
T Consensus 65 ~l~I~~v~~~-D~G~Y~C~a~n~~--~~~~s~~~~l~v~~-~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~ 140 (213)
T 2x1w_L 65 GFTIPSYMIS-YAGMVFCEAKIND--ESYQSIMYIVVVVG-YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFN 140 (213)
T ss_dssp EEEEEGGGTT-TCSEEEEEEC------CEECCCEEEEECB-CCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEE
T ss_pred cEEEccCChh-cCceEEEEEEECC--eeEEEEEEEEEEeC-CcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEE
Confidence 5999999999 9999999998731 23333336666643 223322 33233488999999999998622 3345799
Q ss_pred EEec
Q psy5866 94 VTLQ 97 (98)
Q Consensus 94 W~~~ 97 (98)
|++.
T Consensus 141 W~~~ 144 (213)
T 2x1w_L 141 WEYP 144 (213)
T ss_dssp EECS
T ss_pred EEec
Confidence 9864
No 177
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.17 E-value=3.8e-11 Score=76.53 Aligned_cols=81 Identities=20% Similarity=0.347 Sum_probs=49.7
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCe-eeEeeEEEEEECCCC---CCEEeCCCC---ceecCCCcEEEEEEcCC---
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQD-LHSQVYTVTVLTPPQ---PPKISPGAN---PVATEGRAIELVCSTSG--- 85 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~-~~~~~~~l~v~~~~~---~p~i~~~~~---~~~~~g~~~~l~C~~~~--- 85 (98)
..|.|.+++.+ |+|.|+|.+.+...+.. ..+..+.+.|..++. +|.+..... ..+.+|+.+.|.|.+..
T Consensus 177 ~~L~i~~v~~~-d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~ 255 (349)
T 4dep_C 177 MNLSFLIALIS-NNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFL 255 (349)
T ss_dssp TEEEEESCCGG-GCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCC
T ss_pred CEEEEeeeeec-CCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccC
Confidence 36999999999 99999999998532111 235666777765432 456632221 17889999999999864
Q ss_pred CCCCCeEEEEec
Q psy5866 86 GSPDPQISVTLQ 97 (98)
Q Consensus 86 ~~p~~~~~W~~~ 97 (98)
+.|.|.+.|+++
T Consensus 256 g~p~p~v~W~~~ 267 (349)
T 4dep_C 256 MDSRNEVWWTID 267 (349)
T ss_dssp TTCCCEEEEESS
T ss_pred CCCCCEEEEEEC
Confidence 468899999864
No 178
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.17 E-value=1.8e-10 Score=77.14 Aligned_cols=79 Identities=18% Similarity=0.241 Sum_probs=60.6
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeC-CCCceecCCCcEEEEEEcCCCCCCCe-
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISP-GANPVATEGRAIELVCSTSGGSPDPQ- 91 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~-~~~~~~~~g~~~~l~C~~~~~~p~~~- 91 (98)
....|.|.+++.+ |+|.|+|.+.+. .......+.|.|..+|....... .....+.+|+.+.|.|.+ .|.|.|.
T Consensus 271 ~~~~L~I~~~~~~-D~G~Y~C~a~n~---~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~-~g~P~p~~ 345 (524)
T 2ec8_A 271 RQATLTISSARVN-DSGVFMCYANNT---FGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEY-EAFPKPEH 345 (524)
T ss_dssp EEEEEEESSCCTT-TCEEEEEEEECS---SCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEE-EEESCCCE
T ss_pred eEEEEEECCCCHH-HCEEEEEEEEec---CCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEE-eecCCCcE
Confidence 4568999999999 999999999885 34455577888875554322221 134688999999999998 4789898
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|+++
T Consensus 346 v~W~k~ 351 (524)
T 2ec8_A 346 QQWIYM 351 (524)
T ss_dssp EEEESS
T ss_pred EEEEEC
Confidence 999975
No 179
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.16 E-value=2e-10 Score=72.50 Aligned_cols=80 Identities=15% Similarity=0.215 Sum_probs=58.2
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCC--CeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSG--QDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQI 92 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~--~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 92 (98)
...|.|.+++.+ |+|.|+|.+.+.... ....+..+.|.|...+.+|.+...+...+.+|+.+.|.|.+. .+.+.+
T Consensus 73 ~~~L~I~~v~~~-D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~--~~~~~~ 149 (316)
T 3vh8_G 73 QESFNMSPVTTA-HAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSD--IMFEHF 149 (316)
T ss_dssp SSCEEECSCCGG-GCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEEES--SCCSEE
T ss_pred eEEEEECCCCcc-cCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCccCCCCeEEEEEcCC--CCCcEE
Confidence 456999999999 999999999764221 123445577888766666666433344588999999999984 356789
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 150 ~w~k~ 154 (316)
T 3vh8_G 150 FLHKE 154 (316)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99875
No 180
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.15 E-value=2.7e-11 Score=82.02 Aligned_cols=73 Identities=14% Similarity=0.132 Sum_probs=54.5
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeC-CCCceecCCCcEEEEEEcCCCCCCCeEEE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISP-GANPVATEGRAIELVCSTSGGSPDPQISV 94 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W 94 (98)
.+|.|.+++.+ |+|.|+|.+.+ . .+..+.|.|..+|.. .+.+ .....+.+|+.+.|.|.+. |.|.|.+.|
T Consensus 290 ~~L~I~~v~~~-DsG~Y~C~a~N----~--~~~~~~L~V~~~p~i-~~~~~~~~~~v~~G~~v~L~C~~~-g~P~p~i~W 360 (527)
T 3qs9_E 290 LFAFVSSVARN-DTGYYTCSSSK----H--PSQSALVTIVEKGFI-NATNSSEDYEIDQYEEFCFSVRFK-AYPQIRCTW 360 (527)
T ss_dssp EEEEESSCCGG-GCEEEEEEETT----E--EEEEEEEEEC--CEE-ECCCSCCEECCCTTCCCCEEEEEE-EESCCEEEE
T ss_pred EEEEEccCCcc-cCeEEEEEEEe----C--CCceEEEEEEccCcc-ccccCcccEEEcCCCeEEEEEEEE-ecCCCEEEE
Confidence 45999999999 99999999987 2 566677888654421 1111 1235678899999999985 789999999
Q ss_pred Eec
Q psy5866 95 TLQ 97 (98)
Q Consensus 95 ~~~ 97 (98)
+++
T Consensus 361 ~k~ 363 (527)
T 3qs9_E 361 TFS 363 (527)
T ss_dssp EET
T ss_pred EEC
Confidence 975
No 181
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.14 E-value=1.5e-10 Score=76.47 Aligned_cols=75 Identities=13% Similarity=0.190 Sum_probs=51.2
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISV 94 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W 94 (98)
..+|.|.+++.+ |+|.|+|.+.|. ....+..+.|.|..+| .+..........|..+.|.|.+. |.|.|.++|
T Consensus 102 ~~sL~I~~v~~~-D~G~Y~C~a~N~---~g~~~~~~~l~V~~~p---~~~~~~p~~~~~~~~~~L~C~a~-G~P~P~i~W 173 (423)
T 3qs7_E 102 VVSMVILKMTET-QAGEYLLFIQSE---ATNYTILFTVSIRNTL---LYTLRRPYFRKMENQDALVCISE-SVPEPIVEW 173 (423)
T ss_dssp EEEEEESSCCSS-SCSEEEEEEEC-----CEEEEEEEEEEC--------CEEEEEEEECSSSSCEEEEEE-ESSCCEEEE
T ss_pred EEEEEEeecCcc-cCEEEEEEEEcC---CCcEEEEEEEEEecCc---cccccCCcEeccCCceEEEEEEe-eecCCeEEE
Confidence 457999999999 999999999985 3444556677775333 22111112344577778999985 899999999
Q ss_pred Eec
Q psy5866 95 TLQ 97 (98)
Q Consensus 95 ~~~ 97 (98)
++.
T Consensus 174 ~k~ 176 (423)
T 3qs7_E 174 VLC 176 (423)
T ss_dssp EEC
T ss_pred EEC
Confidence 874
No 182
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.14 E-value=3.7e-10 Score=71.94 Aligned_cols=77 Identities=14% Similarity=0.232 Sum_probs=56.8
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCE--EeCCCCceecCCCcEEEEEEcC----CCCCCC
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPK--ISPGANPVATEGRAIELVCSTS----GGSPDP 90 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~--i~~~~~~~~~~g~~~~l~C~~~----~~~p~~ 90 (98)
+|.|.+++.+ |+|.|+|.+.+. .......+.|.|..++.... +.......+.+|+.+.|.|.+. .+.|.+
T Consensus 80 ~L~i~~~~~~-D~G~Y~C~a~n~---~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~ 155 (349)
T 4dep_C 80 VLWFRPTLLN-DTGNYTCMLRNT---TYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKP 155 (349)
T ss_dssp EEEESSCCGG-GCEEEEEEEECS---SCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCC
T ss_pred EEEEccCChh-hCEEEEEEEecC---CceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCc
Confidence 6999999999 999999999985 34455567888876543211 1111234678999999999852 367899
Q ss_pred eEEEEec
Q psy5866 91 QISVTLQ 97 (98)
Q Consensus 91 ~~~W~~~ 97 (98)
.+.|+++
T Consensus 156 ~v~W~k~ 162 (349)
T 4dep_C 156 TITWYMG 162 (349)
T ss_dssp EEEEEET
T ss_pred eEEEeeC
Confidence 9999975
No 183
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.13 E-value=2.1e-10 Score=69.79 Aligned_cols=84 Identities=20% Similarity=0.190 Sum_probs=55.3
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECCCC------CeeeEeeEEEEEEC-CCCCCEEe-CCCCceecCCCcEEEEE
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAGSG------QDLHSQVYTVTVLT-PPQPPKIS-PGANPVATEGRAIELVC 81 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~------~~~~~~~~~l~v~~-~~~~p~i~-~~~~~~~~~g~~~~l~C 81 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+.... .........|.|.. +..+|.+. ..+.....+|..+.|.|
T Consensus 73 ~~~~~~~sL~I~~v~~~-DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C 151 (226)
T 3mlr_H 73 DKSISTAYLQWTTLQAS-DTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGC 151 (226)
T ss_dssp EGGGTEEEEEESSCCGG-GCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSSEEEEEE
T ss_pred cCCCCEEEEEECCCCcc-cCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCCCEEEEE
Confidence 34457889999999999 999999999763100 01112234666643 23445552 11223456889999999
Q ss_pred EcCCCCC-CCeEEE
Q psy5866 82 STSGGSP-DPQISV 94 (98)
Q Consensus 82 ~~~~~~p-~~~~~W 94 (98)
.+.+..| .+.+.|
T Consensus 152 ~~~~~~p~~~~v~W 165 (226)
T 3mlr_H 152 LVKDYFPEPVTVSW 165 (226)
T ss_dssp EEEEEBSSCCEEEE
T ss_pred EEEEEECCCeEEEE
Confidence 9987666 567999
No 184
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.13 E-value=4.9e-10 Score=75.45 Aligned_cols=91 Identities=19% Similarity=0.333 Sum_probs=58.8
Q ss_pred EEEEe--CCCCeEEEEEccceeeccCeEEEEEEEECCC----------CCeeeEeeEEEEEEC-CCCCCEEeCCCCc-e-
Q psy5866 6 IIDYR--PDSGRYDLIISNASFERDNGKFECRLKAAGS----------GQDLHSQVYTVTVLT-PPQPPKISPGANP-V- 70 (98)
Q Consensus 6 ~~~~~--~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~----------~~~~~~~~~~l~v~~-~~~~p~i~~~~~~-~- 70 (98)
|+.+. ...+.++|+|++++.+ |+|.|+|.+.+... ..........|.|.. ++..|.+...... .
T Consensus 68 R~~~~~~~~~~~~sL~I~~v~~~-Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~ 146 (512)
T 1zvo_C 68 RVTISVDTSRNQFSLNLRSMSAA-DTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRH 146 (512)
T ss_pred ceEEEecCCCCEEEEEECcCCHH-HCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCccc
Confidence 44433 3456799999999999 99999999987421 001122345677763 3345555311111 1
Q ss_pred ecCCCcEEEEEEcCCCCCCC-eEEEEec
Q psy5866 71 ATEGRAIELVCSTSGGSPDP-QISVTLQ 97 (98)
Q Consensus 71 ~~~g~~~~l~C~~~~~~p~~-~~~W~~~ 97 (98)
...++.+.|.|.+.++.|.+ .++|+++
T Consensus 147 ~~~~~~v~L~C~~~g~~P~p~~v~W~~~ 174 (512)
T 1zvo_C 147 PKDNSPVVLACLITGYHPTSVTVTWYMG 174 (512)
T ss_pred ccCCCeEEEEEEEEeeecCceEEEEEcC
Confidence 23468899999998666765 8999864
No 185
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.12 E-value=2.1e-10 Score=69.06 Aligned_cols=78 Identities=22% Similarity=0.280 Sum_probs=52.4
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCC--------CCeeeEeeEEEEEECC---CCCCEEeCCCCceecCCCcEEEE
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGS--------GQDLHSQVYTVTVLTP---PQPPKISPGANPVATEGRAIELV 80 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~--------~~~~~~~~~~l~v~~~---~~~p~i~~~~~~~~~~g~~~~l~ 80 (98)
..+.++|+|.+++.+ |+|.|.|.+.+... ..........|.|... +..|.+.. ..+ .+.|.
T Consensus 67 ~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P~v~~------~~~-~~~l~ 138 (207)
T 1ypz_E 67 ERRYSTLHIRDAQLE-DSGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKPSVFI------MKN-GTNVA 138 (207)
T ss_dssp TCSEEEEEECSCCGG-GCEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCCEEEE------EEE-TTEEE
T ss_pred CCCEEEEEECCCCHH-HCEEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCCeEEE------eCC-CCeEE
Confidence 377899999999999 99999999987421 0111223457788642 23444421 111 26899
Q ss_pred EEcCCCCCC-CeEEEEec
Q psy5866 81 CSTSGGSPD-PQISVTLQ 97 (98)
Q Consensus 81 C~~~~~~p~-~~~~W~~~ 97 (98)
|.+.+..|. +.+.|+++
T Consensus 139 C~~~g~~P~~~~v~W~~~ 156 (207)
T 1ypz_E 139 CLVKDFYPKEVTISLRSS 156 (207)
T ss_dssp EEEEEESSSCCEEEEECS
T ss_pred EEEeeEeCCCeEEEEecC
Confidence 999866775 79999874
No 186
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.12 E-value=1.2e-09 Score=67.97 Aligned_cols=77 Identities=19% Similarity=0.279 Sum_probs=58.0
Q ss_pred EEEEccceeeccCe-EEEEEEEECCCCCeeeEeeEEEEEEC-CCCCCEEe-CCCCceecCCCcEEEEEEcCCCCCCCe-E
Q psy5866 17 DLIISNASFERDNG-KFECRLKAAGSGQDLHSQVYTVTVLT-PPQPPKIS-PGANPVATEGRAIELVCSTSGGSPDPQ-I 92 (98)
Q Consensus 17 ~l~I~~v~~~~d~G-~y~C~~~~~~~~~~~~~~~~~l~v~~-~~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~p~~~-~ 92 (98)
.|.|.+++.+ |+| .|+|.+.+. .....+..+.|.|.. ...+|.+. ......+.+|+.+.|.|.+. |.|.|. +
T Consensus 146 ~L~i~~v~~~-d~G~~Y~C~a~n~--~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~-g~p~p~~i 221 (290)
T 2o26_X 146 GITIKNVKRA-YHRLCVRCAAQRD--GTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIK-DVSTSVNS 221 (290)
T ss_dssp EEEEESCCGG-GTTCEEEEEEEET--TEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEE-ESSTTCEE
T ss_pred CEEEecccHH-HCCCEEEEEEEEC--CceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEe-cCCcceeE
Confidence 6999999999 999 999999985 123334457777763 33455552 22445889999999999997 788886 9
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 222 ~W~~~ 226 (290)
T 2o26_X 222 MWLKM 226 (290)
T ss_dssp EEEEE
T ss_pred EEecC
Confidence 99975
No 187
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.12 E-value=1.9e-09 Score=64.76 Aligned_cols=79 Identities=15% Similarity=0.285 Sum_probs=63.3
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCe
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQ 91 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 91 (98)
..+...+.|++++ |+|.|.|.+.-. .......+.|+|+.+|..+.|... ...+.+|+.++|+|.+.++.|...
T Consensus 48 g~~w~~l~l~~vs---~~g~~~C~~~c~---~~~~~~~~~itVy~~P~~v~i~~~-p~~~~~G~~~tL~C~v~~v~P~~~ 120 (192)
T 1zxq_A 48 QAQWKHYLVSNIS---HDTVLQCHFTCS---GKQESMNSNVSVYQPPRQVILTLQ-PTLVAVGKSFTIECRVPTVEPLDS 120 (192)
T ss_dssp ETTEEEEEEEEEC---SCEEEEEEEEET---TEEEEEEEEEEECBCCCCCEEEEE-SSEECTTSEEEEEEEECSCBCGGG
T ss_pred CCCeEEEEEeccc---cCCeeEEEEECC---CcceEEEEEEEEEeCCCCceEccC-CccccCCCcEEEEEEeCCeECCCC
Confidence 3444578999997 468899999873 466677899999999999988632 357889999999999998898765
Q ss_pred --EEEEec
Q psy5866 92 --ISVTLQ 97 (98)
Q Consensus 92 --~~W~~~ 97 (98)
+.|++.
T Consensus 121 L~v~llrG 128 (192)
T 1zxq_A 121 LTLFLFRG 128 (192)
T ss_dssp EEEEEEET
T ss_pred cEEEEEcC
Confidence 689874
No 188
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.11 E-value=1.8e-10 Score=66.62 Aligned_cols=73 Identities=19% Similarity=0.195 Sum_probs=54.7
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVT 95 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~ 95 (98)
..+.|.+++.+ |+|.|+|.+.+. ..+..+.|.|..++ +.+. .....+.+|+.+.|.|.+..+.|.+.+.|+
T Consensus 51 ~~~~~~~~~~~-d~G~Y~C~~~~~-----~~s~~~~l~v~~~~--~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~ 121 (170)
T 3ry4_A 51 QPSYRFKANNN-DSGEYTCQTGQT-----SLSDPVHLTVLFEW--LVLQ-TPHLEFQEGETIMLRCHSWKDKPLVKVTFF 121 (170)
T ss_dssp SSEEEEECCGG-GCEEEEEEETTS-----BCCCCEEEEEECCS--EEEE-CSCSEECTTCCEEEEEEEGGGCCEEEEEEE
T ss_pred cceEEEecccc-cCeEEEEEEeCC-----CceEeEEEEEECCc--eEec-CCCceeecCCeEEEEEECCCCCCCceEEEE
Confidence 34778899999 999999999852 23345677776533 2333 245678899999999998767778999999
Q ss_pred ec
Q psy5866 96 LQ 97 (98)
Q Consensus 96 ~~ 97 (98)
++
T Consensus 122 ~~ 123 (170)
T 3ry4_A 122 QN 123 (170)
T ss_dssp ET
T ss_pred EC
Confidence 75
No 189
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.11 E-value=2e-10 Score=72.95 Aligned_cols=81 Identities=23% Similarity=0.369 Sum_probs=59.8
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCC-eeeEeeEEEEEECCC--CCCEE-eCCCCceecCCCcEEEEEEcC--CCCC-
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQ-DLHSQVYTVTVLTPP--QPPKI-SPGANPVATEGRAIELVCSTS--GGSP- 88 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~-~~~~~~~~l~v~~~~--~~p~i-~~~~~~~~~~g~~~~l~C~~~--~~~p- 88 (98)
..|.|.+++.+ |+|.|+|.+.+..+.. ...+..+.|.|...+ .+|.+ .......+.+|+.+.|.|.+. .|.|
T Consensus 180 ~~L~i~~v~~~-d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~ 258 (339)
T 3o4o_C 180 THLLVHDVALE-DAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPL 258 (339)
T ss_dssp SEEEESSCCGG-GCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCS
T ss_pred ceEEEcccCHh-hCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCC
Confidence 47999999999 9999999999863322 245666788887543 24555 323445788999999999982 3677
Q ss_pred CCeEEEEec
Q psy5866 89 DPQISVTLQ 97 (98)
Q Consensus 89 ~~~~~W~~~ 97 (98)
.+.+.|+++
T Consensus 259 ~~~v~W~~~ 267 (339)
T 3o4o_C 259 TTMLWWTAN 267 (339)
T ss_dssp SCEEEEESS
T ss_pred CceEEEEEC
Confidence 889999864
No 190
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.11 E-value=1e-11 Score=81.52 Aligned_cols=81 Identities=21% Similarity=0.334 Sum_probs=56.0
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC-CCCCCEE-eCCCCceecCCCcEEEEEEcCCCCCCC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT-PPQPPKI-SPGANPVATEGRAIELVCSTSGGSPDP 90 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~-~~~~p~i-~~~~~~~~~~g~~~~l~C~~~~~~p~~ 90 (98)
.+.++|+|.+++.+ |+|.|+|.+.+. .........|.|.. .+.+|.+ ...+...+.+|+.+.|.|.+.+..|.+
T Consensus 75 ~~~~~L~I~~v~~~-D~G~Y~C~~~~~---~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p 150 (434)
T 1igy_B 75 SNTANIHLSSLTSD-DSAVYYCVREGE---VPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEP 150 (434)
T ss_dssp GCBBCEEECSBCGG-GCSEECCCCSSS---SCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSC
T ss_pred CCEEEEEECCCChH-HCEEEEEEEEcc---ccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCC
Confidence 34678999999999 999999999873 22223345677753 2233433 112334567899999999997555776
Q ss_pred -eEEEEec
Q psy5866 91 -QISVTLQ 97 (98)
Q Consensus 91 -~~~W~~~ 97 (98)
.+.|+++
T Consensus 151 ~~v~W~k~ 158 (434)
T 1igy_B 151 VTVTWNSG 158 (434)
T ss_dssp CEEEETTT
T ss_pred eEEEEeeC
Confidence 9999864
No 191
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.11 E-value=3.4e-11 Score=74.37 Aligned_cols=82 Identities=20% Similarity=0.267 Sum_probs=59.0
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCC-eeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeE
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQ-DLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQI 92 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~-~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 92 (98)
....|.|..+..+ |.|.|+|.+.+...+. ...+..+.|.|..+|............+.+|+.+.|.|.+. |.|.|.+
T Consensus 140 ~~~~l~i~~~~~~-~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~-g~P~p~i 217 (265)
T 2oz4_A 140 PRAQLLLKATPED-NGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAW-GNPLPEL 217 (265)
T ss_dssp SEECCEEECCGGG-TTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCE-EESCCEE
T ss_pred CcEEEEEcccccc-CCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECc-cCCCCeE
Confidence 3456889999998 9999999998643222 23345677888766554222212345788999999999984 8999999
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 218 ~W~~~ 222 (265)
T 2oz4_A 218 KCLKD 222 (265)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99985
No 192
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.11 E-value=3.6e-10 Score=74.52 Aligned_cols=80 Identities=16% Similarity=0.231 Sum_probs=57.8
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCC-cEEEEEEcCCCCCC--
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGR-AIELVCSTSGGSPD-- 89 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~-~~~l~C~~~~~~p~-- 89 (98)
.++.+|+|.+++.+ |+|.|.|.+.+. .......+.|.|..+|.. .+.+........|+ .+.|.|.+.+.+|.
T Consensus 251 ~g~~sL~I~~v~~~-D~G~Y~C~v~~~---~~~~~~~v~L~V~~pP~V-~v~p~~~~~~~~G~~~vtL~C~a~GfyP~~~ 325 (401)
T 3f8u_B 251 TGNGTFWLPRVQPF-QEGTYLATIHLP---YLQGQVTLELAVYKPPKV-SLMPATLARAAPGEAPPELLCLVSHFYPSGG 325 (401)
T ss_dssp EEEEEEEETTCCGG-GCEEEEEEEEET---TEEEEEEEEEEEEBCCEE-EEESSSCCCCCTTCCCCCEEEEEEEEBSSTT
T ss_pred CCcEEEEECcCCHh-hCceEEEEEEec---ccceeEEEEEeeccCCeE-eeccCcceeecCCCccEEEEEEecCCcCCCC
Confidence 46789999999999 999999999884 344555677888765442 22321211245676 79999999877787
Q ss_pred CeEEEE-ec
Q psy5866 90 PQISVT-LQ 97 (98)
Q Consensus 90 ~~~~W~-~~ 97 (98)
+.+.|. ++
T Consensus 326 ~~VtW~~rd 334 (401)
T 3f8u_B 326 LEVEWELRG 334 (401)
T ss_dssp CEEEEEEES
T ss_pred cEEEEEecC
Confidence 799994 53
No 193
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.10 E-value=5.5e-10 Score=67.33 Aligned_cols=75 Identities=15% Similarity=0.271 Sum_probs=61.6
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCe--EEE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQ--ISV 94 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~--~~W 94 (98)
.+.|++++ + |.+.|.|.+... ....+..+.|.|+.+|..+.|... ...+.+|+.++|+|.+.+++|... ++|
T Consensus 53 ~~~ls~vs-~-d~~~~~C~~~c~---~~~~~~~v~l~Vy~~P~~v~i~~~-~~~~~~G~~~tL~C~v~~~~P~~~L~i~w 126 (196)
T 3bn3_B 53 ARQLVDIR-E-PETQPVCFFRCA---RRTLQARGLIRTFQRPDRVELMPL-PPWQPVGENFTLSCRVPGAGPRASLTLTL 126 (196)
T ss_dssp EEEEEEEC-S-SEECCEEEEEET---TEEEEEECEEEEEBCCCCCEECCC-CSSEETTSEEEEEEEETTCBCGGGEEEEE
T ss_pred EEEEEEEc-c-CCCceEEEEECC---CCceEEEEEEEEecCCCcCEEccC-CccccCCCcEEEEEEeCCccCCCCcEEEE
Confidence 47899998 7 888899998773 466777889999999999888653 235889999999999998888765 799
Q ss_pred Eec
Q psy5866 95 TLQ 97 (98)
Q Consensus 95 ~~~ 97 (98)
+++
T Consensus 127 lkg 129 (196)
T 3bn3_B 127 LRG 129 (196)
T ss_dssp EET
T ss_pred EeC
Confidence 975
No 194
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.09 E-value=2.9e-10 Score=71.80 Aligned_cols=75 Identities=13% Similarity=0.158 Sum_probs=57.3
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCe-EEEE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQ-ISVT 95 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~-~~W~ 95 (98)
.|.|.++..+ |+|.|+|.+.+. ....+..+.|.|..+|.. .+.......+.+|+.+.|.|.+. +.|.|. +.|+
T Consensus 195 ~L~i~~~~~~-d~G~Y~C~a~n~---~~~~~~~~~l~V~~~P~~-~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~~i~W~ 268 (331)
T 3u83_A 195 RYRLVPSREA-HQQSLACIVNYH---MDRFKESLTLNVQYEPEV-TIEGFDGNWYLQRMDVKLTCKAD-ANPPATEYHWT 268 (331)
T ss_dssp EEEECCCGGG-TTCEEEEEEEET---TEEEEEEEECCEEEEEEE-EEECCCSCCBTTCCCEEEEEEEE-EESCCCEEEEE
T ss_pred EEEEEecccc-CCCEEEEEEecC---CCcceeeEEEEEecCCeE-EEecCCCceEeCCCeEEEEEeCc-CCCCCCEEEEE
Confidence 4888889999 999999999985 345566677777655532 23333445688999999999995 788887 9998
Q ss_pred ec
Q psy5866 96 LQ 97 (98)
Q Consensus 96 ~~ 97 (98)
++
T Consensus 269 ~~ 270 (331)
T 3u83_A 269 TL 270 (331)
T ss_dssp ET
T ss_pred EC
Confidence 74
No 195
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.09 E-value=6.8e-11 Score=75.08 Aligned_cols=77 Identities=18% Similarity=0.162 Sum_probs=58.1
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEc----CCCCCCCeE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCST----SGGSPDPQI 92 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~----~~~~p~~~~ 92 (98)
+|.|.+++.. |+|.|+|.+.+. .......+.|.|..++............+.+|+.+.|.|.+ ..+.|.+.+
T Consensus 82 ~L~i~~v~~~-D~G~Y~C~~~n~---~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v 157 (339)
T 3o4o_C 82 ALWLLPALQE-DSGTYVCTTRNA---SYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKI 157 (339)
T ss_dssp EEEESSBCTT-CCEEEECCEEET---TEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCB
T ss_pred eEEECCCCcc-cCEEEEEEEECC---cceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceE
Confidence 6999999999 999999999985 45566677888876654321110122478899999999994 357889999
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 158 ~W~k~ 162 (339)
T 3o4o_C 158 QWYKD 162 (339)
T ss_dssp CCEES
T ss_pred EEecC
Confidence 99975
No 196
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.09 E-value=3.6e-10 Score=69.12 Aligned_cols=74 Identities=18% Similarity=0.191 Sum_probs=56.4
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISV 94 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W 94 (98)
...|.|.+++.+ |+|.|+|.+.+. ..+..+.|.|..++ ..+.. ....+.+|+.+.|.|.+..+.|.+.+.|
T Consensus 47 ~~~l~i~~~~~~-d~G~Y~C~~~~~-----~~s~~~~l~v~~~~--~~~~~-~~~~~~~g~~v~l~C~~~~~~p~~~v~W 117 (262)
T 3rjd_A 47 TPSYRITSASVN-DSGEYRCQRGLS-----GRSDPIQLEIHRGW--LLLQV-SSRVFTEGEPLALRCHAWKDKLVYNVLY 117 (262)
T ss_dssp SSEEEESSCCGG-GCEEEEEEESSS-----CCCCCEEEEEECSS--EEEEE-SCSEEETTSCEEEEEEEGGGCCCEEEEE
T ss_pred CCeEEEecCCcc-cCeEEEEEEecC-----CccccEEEEEeccc--eEecC-CCeEEecCCeEEEEEEccCCCCCceEEE
Confidence 457999999999 999999999763 22345677776432 23332 4567889999999999966888899999
Q ss_pred Eec
Q psy5866 95 TLQ 97 (98)
Q Consensus 95 ~~~ 97 (98)
+++
T Consensus 118 ~~~ 120 (262)
T 3rjd_A 118 YRN 120 (262)
T ss_dssp EET
T ss_pred EEC
Confidence 975
No 197
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.08 E-value=2.2e-11 Score=80.01 Aligned_cols=81 Identities=20% Similarity=0.276 Sum_probs=58.5
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCe-eeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQD-LHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQIS 93 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~-~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~ 93 (98)
...|.|.++..+ |+|.|+|.+.+...+.. .....+.|.|..+|............+.+|+.+.|.|.+. |.|.|.+.
T Consensus 326 ~~~L~i~~~~~~-d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~-g~P~p~i~ 403 (450)
T 1z7z_I 326 RAQLLLKATPED-NGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAW-GNPLPELK 403 (450)
T ss_dssp CCCEEEECCGGG-TTCEEEEEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSEEEEETTCEECCCCCCE-EESCCEEE
T ss_pred eEEEEEecCccc-CCceEEEEEEcCCCCcccccceeEEEEEecCCceeeccCCCceeEcCCCeEEEEEecc-cCCCCcEE
Confidence 346999999999 99999999986432221 3345677777655443221111345788999999999985 89999999
Q ss_pred EEec
Q psy5866 94 VTLQ 97 (98)
Q Consensus 94 W~~~ 97 (98)
|+++
T Consensus 404 W~~~ 407 (450)
T 1z7z_I 404 CLKD 407 (450)
T ss_dssp EEET
T ss_pred EEEC
Confidence 9985
No 198
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.07 E-value=1.8e-10 Score=74.30 Aligned_cols=72 Identities=24% Similarity=0.304 Sum_probs=55.0
Q ss_pred cceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEEec
Q psy5866 22 NASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 22 ~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
+++.+ |+|.|+|.+.+.. ....+..+.|.|..+|..+.... ....+.+|+.+.|.|.+..+.|.+.+.|+++
T Consensus 83 ~~~~~-D~G~Y~C~a~n~~--g~~~s~~~~l~V~~~p~~~~~~~-~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~ 154 (404)
T 3p3y_A 83 GRPEE-YEGEYQCFARNKF--GTALSNRIRLQVSKSPLWPKENL-DPVVVQEGAPLTLQCNPPPGLPSPVIFWMSS 154 (404)
T ss_dssp CCTTS-SCEEEEEEEECSS--CEEEEEEEEEEECCCCCCCCCCC-CCEEEETTSCEEECCCCCCCSSCCEEEEECT
T ss_pred CCCcc-CCEEEEEEEEcCC--CeEeeeeEEEEEeccCccccCCC-CCeEEccCCcEEEEeCCCCCCCCCeEEEeCC
Confidence 78889 9999999999852 12334567788876665544332 3468899999999999866889999999874
No 199
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.07 E-value=6.2e-10 Score=69.35 Aligned_cols=84 Identities=14% Similarity=0.161 Sum_probs=55.6
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEE-------CC-----------CC-Ce---eeEeeEEEEEE-CCCCCCEEe-C
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKA-------AG-----------SG-QD---LHSQVYTVTVL-TPPQPPKIS-P 65 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~-------~~-----------~~-~~---~~~~~~~l~v~-~~~~~p~i~-~ 65 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+ .. .. .. .......+.|. .++..|.+. .
T Consensus 96 ~~~~~~~sL~I~~v~~~-DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v~~~ 174 (267)
T 3u1s_H 96 DSGASTVYMELRGLTAD-DTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTKGPSVFPL 174 (267)
T ss_dssp CGGGCCEEEEECSCCGG-GCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCBCCEEEEE
T ss_pred cCCCCEEEEEECCCChh-hCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCCCCCCEEEEe
Confidence 34457889999999999 99999999861 10 00 00 12223567775 344556553 1
Q ss_pred CCCceecCCCcEEEEEEcCCCCC-CCeEEE
Q psy5866 66 GANPVATEGRAIELVCSTSGGSP-DPQISV 94 (98)
Q Consensus 66 ~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W 94 (98)
.+.....+|..+.|.|.+.+..| .+.+.|
T Consensus 175 ~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W 204 (267)
T 3u1s_H 175 APSSKSTSGGTAALGCLVKDYFPEPVTVSW 204 (267)
T ss_dssp CCCGGGEETTEEEEEEEEEEEBSSCCEEEE
T ss_pred cCCcccCCCCcEEEEEEEeEEECCCeEEEE
Confidence 23334567899999999987677 567999
No 200
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.07 E-value=2.3e-10 Score=73.48 Aligned_cols=74 Identities=15% Similarity=0.191 Sum_probs=56.5
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCC----CCCC
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGG----SPDP 90 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~----~p~~ 90 (98)
...|.|.+++.+ |+|.|+|.+.+. .......+.+.|..+|..+ ....+.+|+.+.|.|.+.+. .|.|
T Consensus 141 ~~~L~i~~v~~~-d~G~Y~C~a~~~---~~~~~~~~~l~v~~~p~~~-----~~~~~~~G~~v~l~C~~~~~~~~~~P~p 211 (363)
T 1wio_A 141 GKTLSVSQLELQ-DSGTWTCTVLQN---QKKVEFKIDIVVLAFQKAS-----SIVYKKEGEQVEFSFPLAFTVEKLTGSG 211 (363)
T ss_dssp SSEEEECSBCGG-GCEECEEEEEET---TEEEEECCEECEECCSCSE-----EEEEEETBCCEEEECCCCCCCCSSCEEE
T ss_pred ceEEEEeeCChh-cCCEEEEEEecC---CCeEEEEEEEEEecCCCCC-----CceEEecCCEEEEEEEEecccccCCCce
Confidence 457999999999 999999999984 3445555677776555543 23568889999999987532 6788
Q ss_pred eEEEEec
Q psy5866 91 QISVTLQ 97 (98)
Q Consensus 91 ~~~W~~~ 97 (98)
.+.|+++
T Consensus 212 ~i~W~~~ 218 (363)
T 1wio_A 212 ELWWQAE 218 (363)
T ss_dssp EEEEEES
T ss_pred eEEEecC
Confidence 9999874
No 201
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.07 E-value=2.4e-10 Score=79.93 Aligned_cols=78 Identities=19% Similarity=0.352 Sum_probs=60.6
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQI 92 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 92 (98)
.....|.|.++... |+|.|+|.+.|. .+..+..+.|.|..+|. .+.......+.+|+.+.|.|.+. |.|.|.+
T Consensus 674 ~~~~~L~i~~v~~~-d~G~Y~C~a~N~---~g~~~~~~~l~V~~~P~--~~~~~~~~~v~~G~~v~l~C~~~-g~P~p~i 746 (816)
T 3dmk_A 674 RRGSVLTIEAVEAS-HAGNFTCHARNL---AGHQQFTTPLNVYVPPR--WILEPTDKAFAQGSDAKVECKAD-GFPKPQV 746 (816)
T ss_dssp TTEEEEEEESCCGG-GCEEEEEEEECS---SCEEEEEEEECEEEEEE--EEECCCCEEEETTCCEEEECEEE-EESCCEE
T ss_pred CCeeEEEEccCChh-hCEEEEEEEEeC---CccEEEEEEEEEEeCCc--eeeecccceecCCCcEEEEEEEe-cCCCCeE
Confidence 34568999999999 999999999985 34555667777765543 22223456788999999999995 7899999
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 747 ~W~k~ 751 (816)
T 3dmk_A 747 TWKKA 751 (816)
T ss_dssp ECCEE
T ss_pred EEEec
Confidence 99874
No 202
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.05 E-value=2.2e-10 Score=73.51 Aligned_cols=70 Identities=17% Similarity=0.374 Sum_probs=53.1
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQI 92 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 92 (98)
.+.++|.|.+++.+ |+|.|+|.+.+. . ..+.|.|... .+. +...+.+|+.+.|.|.+. +.|.|.+
T Consensus 64 ~~~~~L~I~~v~~~-D~G~Y~C~~~n~-----~--~~~~l~V~~~----~~~--~~~~v~~G~~v~l~C~~~-~~p~~~v 128 (363)
T 1wio_A 64 QGNFPLIIKNLKIE-DSDTYICEVEDQ-----K--EEVQLLVFGL----TAN--SDTHLLQGQSLTLTLESP-PGSSPSV 128 (363)
T ss_dssp TTCCCEEECSCCGG-GCEEEEEEETTE-----E--EEEEEEEEEE----EES--SCSSEESBSCEEEEEECC-TTCCCCE
T ss_pred CCeEEEEECCCCHH-HCEEEEEEEEEC-----C--CcEEEEEEeC----CCC--CceEEecCCCEEEEEEcC-CCCCCeE
Confidence 35677999999999 999999999763 1 2456666521 122 334778999999999986 5889999
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 129 ~W~~~ 133 (363)
T 1wio_A 129 QCRSP 133 (363)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 99975
No 203
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.05 E-value=7.2e-10 Score=68.81 Aligned_cols=77 Identities=22% Similarity=0.358 Sum_probs=54.2
Q ss_pred EEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC-CCCEEe-CCCCceecCCCcEEEEEEcCCCCCCCeEEEE
Q psy5866 18 LIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP-QPPKIS-PGANPVATEGRAIELVCSTSGGSPDPQISVT 95 (98)
Q Consensus 18 l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~-~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~ 95 (98)
|.|.+++.+ |+|.|+|.+.+.. ....+..+.|.|...+ .+|.+. ......+.+|+.+.|.|.+.+..+.+.+.|+
T Consensus 146 L~i~~~~~~-d~G~Y~C~a~n~~--~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~ 222 (292)
T 4dkd_C 146 FTIHRAKFI-QSQDYQCSALMGG--RKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQ 222 (292)
T ss_dssp CEETTCCGG-GCSEEEEEECSTT--SCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECC
T ss_pred EEECCCCHH-HCeEEEEEEEeCC--CceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEe
Confidence 999999999 9999999999742 2334446788887532 255552 2234456799999999999744445667786
Q ss_pred ec
Q psy5866 96 LQ 97 (98)
Q Consensus 96 ~~ 97 (98)
++
T Consensus 223 ~~ 224 (292)
T 4dkd_C 223 HN 224 (292)
T ss_dssp BS
T ss_pred CC
Confidence 53
No 204
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.05 E-value=3.4e-10 Score=71.28 Aligned_cols=77 Identities=19% Similarity=0.273 Sum_probs=54.4
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCC-eEEEE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDP-QISVT 95 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~ 95 (98)
.|.|.++... |+|.|+|.+.+... .......+.|.|..+|.. .+.......+.+|+.+.|.|.+. |.|.| .+.|+
T Consensus 178 ~l~i~~~~~~-d~g~Y~C~a~n~~~-~~~~~~~~~l~V~~~P~v-~~~~~~~~~~~~g~~v~l~C~~~-g~P~p~~v~W~ 253 (313)
T 4fqp_A 178 LWILVPSSQV-DGKNVTCKVEHESF-EKPQLLTVNLTVYYPPEV-SISGYDNNWYLGQNEATLTCDAR-SNPEPTGYNWS 253 (313)
T ss_dssp EEEECCCGGG-TTCEEEEEEECTTS-SSCEEEEEECCBCEEEEE-EEECCCSCEETTCCCEEEEEEEE-EESCCCEEEEE
T ss_pred eeeecccccc-cCeeEEEEEEccCc-CccceeeeecccccCCcc-ccccccceeecCCCeEEEEEEec-CCCCCcEEEEE
Confidence 4888999999 99999999998533 233344455555434332 23333445677889999999986 78888 69999
Q ss_pred ec
Q psy5866 96 LQ 97 (98)
Q Consensus 96 ~~ 97 (98)
++
T Consensus 254 ~~ 255 (313)
T 4fqp_A 254 TT 255 (313)
T ss_dssp ET
T ss_pred EC
Confidence 75
No 205
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.03 E-value=2.5e-10 Score=68.47 Aligned_cols=78 Identities=17% Similarity=0.301 Sum_probs=49.8
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEE--eCCCCceecCCCcEEEEEEcCCCCCC-CeE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKI--SPGANPVATEGRAIELVCSTSGGSPD-PQI 92 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i--~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~ 92 (98)
.+|+|.+++.+ |+|.|+|.+.+..... .....+.+.+ ....+|.+ .. ......+|+.+.|.|.+.+.+|+ +.+
T Consensus 68 ~~L~I~~~~~~-D~G~Y~C~a~~~~~~~-~~~~~v~~~~-~~~~~P~v~~~~-~~~~~~~g~~~~L~C~~~g~~P~~~~v 143 (207)
T 2vol_A 68 SELPIMHQDWL-NGKEFKCRVNSAAFPA-PIEKTISKTK-GRPKAPQVYTLP-PPKEQMAKDKVSLTCMITDFFPEDITV 143 (207)
T ss_dssp EEEECCHHHHH-TTCCEEEEEECTTCSS-CEEEEECCCC-CCCBCCEEEEEC-CCTGGGSSSEEEEEEEEEEEBSSCCEE
T ss_pred EEEEEehhHcC-CCCEEEEEEEccCCCC-ceEEEeccCC-CCCcCCeEEEeC-CCHHHhcCCceEEEEEEeeEECCCCEE
Confidence 46999999999 9999999999853321 1122222210 12233444 22 22233468999999999755665 489
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 144 ~W~k~ 148 (207)
T 2vol_A 144 EWESN 148 (207)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99975
No 206
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.02 E-value=1.6e-09 Score=75.79 Aligned_cols=79 Identities=23% Similarity=0.378 Sum_probs=59.6
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEe-CCCCceecCCCcEEEEEEcCCCCCCCeE
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKIS-PGANPVATEGRAIELVCSTSGGSPDPQI 92 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 92 (98)
....|.|.+++.+ |+|.|+|.+.+. .......+.+.|.....+|.+. ......+.+|+.+.|.|.+. |.|.+.+
T Consensus 387 ~~~~L~i~~v~~~-d~G~Y~C~a~n~---~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~-g~p~p~v 461 (816)
T 3dmk_A 387 SESVLRIESVKKE-DKGMYQCFVRND---RESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAG-GNPTPEI 461 (816)
T ss_dssp CSSEEEESSCCGG-GCEEEEEEEECS---SCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEE-CSSCCEE
T ss_pred CCCEEEEcCCCHH-HCEEEEEEEECC---CCcEEEEEEEEEccccCCCceEecCcceEEcCCCCEEEEEEEe-cCCCCEE
Confidence 3457999999999 999999999985 3344445566665444556552 22456788999999999985 7899999
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 462 ~W~~~ 466 (816)
T 3dmk_A 462 SWELD 466 (816)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99974
No 207
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.02 E-value=2.6e-09 Score=62.39 Aligned_cols=70 Identities=17% Similarity=0.315 Sum_probs=51.1
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCC-CCeEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSP-DPQIS 93 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~~ 93 (98)
...|.|. +.+ |+|.|+|.+.+. . ...+.|.|..+|.. ... .....+.+|+.+.|.|.+. +.| .+.+.
T Consensus 50 ~~~l~i~--~~~-d~G~Y~C~~~n~----~--~~~~~l~V~~~P~~-~~~-~~~~~~~~g~~~~l~C~~~-g~p~~~~i~ 117 (184)
T 3b5h_A 50 KTEFKVD--SDD-QWGEYSCVFLPE----P--MGTANIQLHGPPRV-KAV-KSSEHINEGETAMLVCKSE-SVPPVTDWA 117 (184)
T ss_dssp EEEEEEC--GGG-CCEEEEEEEEST----T--SCEEEEEECCSCCC-EES-CSEEEECTTSCEEEEEECC-CSSCCCEEE
T ss_pred cEEEEEe--chh-hCeEEEEEEECC----c--CcEEEEEEecCCce-eec-CCCcEEcCCCcEEEEEEEC-CCCCCCeEE
Confidence 4456666 578 999999999972 1 23457777666543 222 2345788999999999986 677 79999
Q ss_pred EEe
Q psy5866 94 VTL 96 (98)
Q Consensus 94 W~~ 96 (98)
|++
T Consensus 118 W~~ 120 (184)
T 3b5h_A 118 WYK 120 (184)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 208
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.01 E-value=4.3e-10 Score=67.97 Aligned_cols=78 Identities=14% Similarity=0.280 Sum_probs=49.9
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEE--eCCCCceecCCCcEEEEEEcCCCCCCC-eE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKI--SPGANPVATEGRAIELVCSTSGGSPDP-QI 92 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i--~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~ 92 (98)
.+|+|.+++.+ |+|.|+|.+.+..... .....+.+ +.....+|.+ .. ......+|+.+.|.|.+.+.+|.+ .+
T Consensus 76 ~~L~I~~~~~~-D~g~Y~C~~~~~~~~~-~~~~~v~~-~~~~~~~P~v~~~~-~~~~~~~g~~~~L~C~~~g~~P~~~~v 151 (218)
T 2rgs_A 76 STLPIQHQDWM-SGKEFKCKVNNKDLPS-PIERTISK-IKGLVRAPQVYILP-PPAEQLSRKDVSLTCLVVGFNPGDISV 151 (218)
T ss_dssp EEEECCHHHHH-TTCCEEEEEEETTCSS-CEEEEECC-CCCCCBCCEEEEEC-CCGGGTTSSEEEEEEEEEEEBSSCCEE
T ss_pred EEEEEcHHHcC-CCCeEEEEEECCcCCC-cceEEEee-cCCCCCCCEEEEEC-CChHHhcCCceEEEEEEEeeeCCCcEE
Confidence 46999999999 9999999999863311 11121111 0122234444 22 222334689999999997547765 89
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 152 ~W~k~ 156 (218)
T 2rgs_A 152 EWTSN 156 (218)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99975
No 209
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.01 E-value=2.2e-10 Score=73.85 Aligned_cols=78 Identities=18% Similarity=0.289 Sum_probs=54.5
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISV 94 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W 94 (98)
+.+|.|.+++.+ |+|.|+|.+.+..+ ...+..+.+.|...+.+ .+.+ ....+.+|+.+.|.|.+..+.|.+.+.|
T Consensus 61 ~~~L~i~~~~~~-D~G~Y~C~a~n~~g--~~~s~~~~l~v~~~~~p-~~~~-~~~~~~~G~~v~l~C~~~~~~p~~~v~W 135 (395)
T 1bih_A 61 EGSLVFLRPQAS-DEGHYQCFAETPAG--VASSRVISFRKTYLIAS-PAKT-HEKTPIEGRPFQLDCVLPNAYPKPLITW 135 (395)
T ss_dssp SCCEEESSCCGG-GCEEEEEEEEETTE--EEECCCEEEEEEEEECC-CCEE-EEECCBTTEEEEECCCCCEEESCCEEEE
T ss_pred CceEEEecCCCC-CCcEEEEEEEeCCC--eEEeEEEEEEEEEeecC-CcCC-cceeeeeCCcEEEEecCCCCCCCCeEEE
Confidence 447999999999 99999999998521 12222345544322222 2221 2456779999999999756889999999
Q ss_pred Eec
Q psy5866 95 TLQ 97 (98)
Q Consensus 95 ~~~ 97 (98)
+++
T Consensus 136 ~~~ 138 (395)
T 1bih_A 136 KKR 138 (395)
T ss_dssp EEE
T ss_pred Eec
Confidence 974
No 210
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.00 E-value=2.5e-10 Score=68.82 Aligned_cols=80 Identities=15% Similarity=0.137 Sum_probs=52.0
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEE--eCCCCceecCCCcEEEEEEcCCCCCC-C
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKI--SPGANPVATEGRAIELVCSTSGGSPD-P 90 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i--~~~~~~~~~~g~~~~l~C~~~~~~p~-~ 90 (98)
+..+|+|.+++.+ |+|.|+|.+.+... .......+.+.....+|.+ .......+.+|..+.|.|.+.+.+|+ +
T Consensus 64 ~~~~L~I~~~~~~-D~g~Y~C~~~~~~~---~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~ 139 (214)
T 1ow0_A 64 VSSVLPGCAEPWN-HGKTFTCTAAYPES---KTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDV 139 (214)
T ss_dssp EEEECTTTHHHHH-HTCEEEEEECCSSC---SSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCC
T ss_pred EEEEEEEeHHHcC-CCCeEEEEEecCCC---CCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCc
Confidence 3457999999999 99999999987532 1111122221122344444 22222346788999999999765664 5
Q ss_pred eEEEEec
Q psy5866 91 QISVTLQ 97 (98)
Q Consensus 91 ~~~W~~~ 97 (98)
.+.|+++
T Consensus 140 ~v~W~k~ 146 (214)
T 1ow0_A 140 LVRWLQG 146 (214)
T ss_dssp EEEEEET
T ss_pred EEEEEEC
Confidence 9999985
No 211
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.99 E-value=2.8e-09 Score=65.31 Aligned_cols=79 Identities=19% Similarity=0.240 Sum_probs=52.3
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCC-----CCeeeEeeEEEEEEC---CCCCCEEeCCCCceecCCCcEEEEEE
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGS-----GQDLHSQVYTVTVLT---PPQPPKISPGANPVATEGRAIELVCS 82 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~-----~~~~~~~~~~l~v~~---~~~~p~i~~~~~~~~~~g~~~~l~C~ 82 (98)
...+.++|+|.+++.+ |+|.|.|.+.+... ..........|.|.. .+..|.+.. .. ....|.|.
T Consensus 70 ~~~~~~sL~I~~v~~~-Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P~v~~------~~-~~~~L~C~ 141 (229)
T 1hxm_A 70 IAKNLAVLKILAPSER-DEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKPSVFV------MK-NGTNVACL 141 (229)
T ss_dssp GGGTEEEEEESSCCGG-GCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCCEEEE------EE-ETTEEEEE
T ss_pred CCCCEEEEEECcCCHh-HCeEEEEEEecCCCcccccchhhcCccEEEEEeccCCCCcCCcEEE------cC-CCCeEEEE
Confidence 4567889999999999 99999999987420 111222335777764 233444421 11 12489999
Q ss_pred cCCCCCCC-eEEEEec
Q psy5866 83 TSGGSPDP-QISVTLQ 97 (98)
Q Consensus 83 ~~~~~p~~-~~~W~~~ 97 (98)
+.+..|.+ .+.|+++
T Consensus 142 ~~g~~P~~i~v~W~~~ 157 (229)
T 1hxm_A 142 VKEFYPKDIRINLVSS 157 (229)
T ss_dssp EESCBSSCCEEEEECS
T ss_pred EEEEeCCCEEEEEecC
Confidence 98777765 8999874
No 212
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.99 E-value=5.4e-10 Score=69.45 Aligned_cols=78 Identities=17% Similarity=0.247 Sum_probs=51.2
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC-CCCCEEeCCCC---ceecCCCcEEEEEEcCCCCCCC
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP-PQPPKISPGAN---PVATEGRAIELVCSTSGGSPDP 90 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~-~~~p~i~~~~~---~~~~~g~~~~l~C~~~~~~p~~ 90 (98)
..+|.|.+++.+ |+|.|+|.+.+..+..... ...+.|.+. |..+.+..... ..+.+|+.+.|.|.+. .|.+
T Consensus 50 ~~~L~i~~~~~~-D~G~Y~C~a~n~~g~~~~~--~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~--~p~~ 124 (289)
T 3mjg_X 50 SSVLTLTNLTGL-DTGEYFCTHNDSRGLETDE--RKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT--DPQL 124 (289)
T ss_dssp EEEEEECSCCGG-GCEEEEEECCC------CC--CEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS--CTTS
T ss_pred eEEEEEccCChh-hCEEEEEEEcccCCCCcCc--EEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC--CCCc
Confidence 468999999999 9999999998753211112 234444443 44444432122 4688999999999986 4667
Q ss_pred eEEEEec
Q psy5866 91 QISVTLQ 97 (98)
Q Consensus 91 ~~~W~~~ 97 (98)
.+.|++.
T Consensus 125 ~v~w~~~ 131 (289)
T 3mjg_X 125 VVTLHEK 131 (289)
T ss_dssp CEEEEES
T ss_pred eEEEEeC
Confidence 7888753
No 213
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.99 E-value=1.7e-09 Score=69.78 Aligned_cols=77 Identities=26% Similarity=0.390 Sum_probs=57.6
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCC---E-EeCCCCceecCCCcEEEEEEcCCCCCCCeE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP---K-ISPGANPVATEGRAIELVCSTSGGSPDPQI 92 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p---~-i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 92 (98)
+|.|.+++.+ |+|.|+|.+.+..+ ...+..+.+.|...|..+ . +.......+.+|+.+.|.|.+. +.|.+.+
T Consensus 178 ~L~i~~~~~~-d~G~Y~C~~~n~~~--~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~~ 253 (403)
T 3laf_A 178 ALQISRLQPG-DSGVYRCSARNPAS--TRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVS-GYPPPSF 253 (403)
T ss_dssp CEEECSCCGG-GCEEEEEEEECSSC--CCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEE-EESCCEE
T ss_pred eEEEcccccc-cCEEEEEEEEcCCC--ceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcC-CCCCCeE
Confidence 6999999999 99999999998532 223344677777665432 1 2223456788999999999986 7888999
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 254 ~W~~~ 258 (403)
T 3laf_A 254 TWLRG 258 (403)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99974
No 214
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.99 E-value=6.1e-10 Score=71.64 Aligned_cols=77 Identities=22% Similarity=0.251 Sum_probs=55.0
Q ss_pred EEEEcccee-eccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEE
Q psy5866 17 DLIISNASF-ERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVT 95 (98)
Q Consensus 17 ~l~I~~v~~-~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~ 95 (98)
+|.|.++.. + |+|.|+|.+.+..+ ...+..+.+.|...+..+.. ......+.+|+.+.|.|.+..+.|.+.+.|+
T Consensus 62 ~L~i~~~~~~~-D~G~Y~C~a~n~~g--~~~s~~~~l~v~~~~~~~~~-~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~ 137 (382)
T 1cs6_A 62 DLVISNPVKAK-DAGSYQCVATNARG--TVVSREASLRFGFLQEFSAE-ERDPVKITEGWGVMFTCSPPPHYPALSYRWL 137 (382)
T ss_dssp EEEEESCCHHH-HCEEEEEEEEETTE--EEECCCEEEEEEEECCCCSS-CCCCEEEETTSCEEECCCCCSEESCCEEEEE
T ss_pred eEEEecccccc-cCEEEEEEEEcCCc--EEEecceEEEeecccccccc-CCCceEEecCCcEEEEeCCCCCCCCcEEEEE
Confidence 589999986 8 99999999998521 22233455665543332221 1245678999999999997667888999999
Q ss_pred ec
Q psy5866 96 LQ 97 (98)
Q Consensus 96 ~~ 97 (98)
++
T Consensus 138 ~~ 139 (382)
T 1cs6_A 138 LN 139 (382)
T ss_dssp ES
T ss_pred EC
Confidence 75
No 215
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=98.99 E-value=1.9e-09 Score=67.04 Aligned_cols=70 Identities=20% Similarity=0.290 Sum_probs=55.1
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCC-CeEEE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPD-PQISV 94 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W 94 (98)
..|.|.+++.+ |+|.|+|.+.+ +. +..+.|.|..+|... +. .....+.+|+.+.|.|.+. + |. +.+.|
T Consensus 57 ~~L~i~~~~~~-d~G~Y~C~~~n---g~---~~~~~l~V~~~~~~~-~~-~~~~~~~~g~~v~l~C~~~-~-p~~~~v~W 125 (290)
T 2o26_X 57 NEWIQEKAEAT-RTGTYTCSNSN---GL---TSSIYVFVRDPAKLF-LV-GLPLFGKEDSDALVRCPLT-D-PQVSQYSL 125 (290)
T ss_dssp SEEEETTCCGG-GCEEEEEEESS---SC---EEEEEEEEECSSCCB-CC-CCCEEEETTSCEEECCCBS-C-CSCEEEEE
T ss_pred ceEEEeccCHH-hCeEEEEEeeC---Cc---cEEEEEEEeCCCccc-cc-ccceEEecCCeEEEeCcCC-C-CCCceEEE
Confidence 57999999999 99999999987 12 556788887666543 32 3557888999999999986 4 66 89999
Q ss_pred Ee
Q psy5866 95 TL 96 (98)
Q Consensus 95 ~~ 96 (98)
++
T Consensus 126 ~~ 127 (290)
T 2o26_X 126 IE 127 (290)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 216
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=98.99 E-value=1.1e-09 Score=70.89 Aligned_cols=80 Identities=20% Similarity=0.297 Sum_probs=52.7
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE----CCCCCCEE--eCCCCceecCCCcEEEEEEcCCCCCC
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL----TPPQPPKI--SPGANPVATEGRAIELVCSTSGGSPD 89 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~----~~~~~p~i--~~~~~~~~~~g~~~~l~C~~~~~~p~ 89 (98)
.+|.|.+++.+ |+|.|+|.+.+..+..........+.+. .....|.+ .......+.+|+.+.|.|.+. |.|.
T Consensus 157 ~~L~I~~v~~~-D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~-g~P~ 234 (384)
T 3kld_A 157 GNLYIAKVEKS-DVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFAL-GNPV 234 (384)
T ss_dssp CCEEESSCCGG-GCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEE-EESC
T ss_pred CcEEEeecCHH-HCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEe-ecCC
Confidence 35999999999 9999999999964322211111222221 11112222 222345688999999999985 7899
Q ss_pred CeEEEEec
Q psy5866 90 PQISVTLQ 97 (98)
Q Consensus 90 ~~~~W~~~ 97 (98)
|.+.|++.
T Consensus 235 p~i~W~k~ 242 (384)
T 3kld_A 235 PTILWRRA 242 (384)
T ss_dssp CEEEEEET
T ss_pred CcEEEEeC
Confidence 99999973
No 217
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.98 E-value=2.9e-10 Score=67.26 Aligned_cols=75 Identities=16% Similarity=0.195 Sum_probs=47.2
Q ss_pred eEEEEEcc-ceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCC---------------EEeCC-----CC---ce
Q psy5866 15 RYDLIISN-ASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP---------------KISPG-----AN---PV 70 (98)
Q Consensus 15 ~~~l~I~~-v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p---------------~i~~~-----~~---~~ 70 (98)
+.+|.|.+ ++.+ |+|.|+|.+.+..+ ..+..+.+.|.....+. .+... .. ..
T Consensus 43 ~~~L~I~~~~~~~-D~G~Y~C~a~n~~g---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (186)
T 1jbj_A 43 DKHLVLQDFSEVE-DSGYYVCYTPASNK---NTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDG 118 (186)
T ss_dssp CSEEEEESCCTTT-SCEEEEEECSSCCC---CCCEEECCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECC
T ss_pred CCEEEECCCCccc-cCEEEEEEEEeCCC---cEEEEEEEEEecccccccccccccccccCCcccccccccccccccccee
Confidence 34799999 9999 99999999988533 22233333332211110 00000 00 12
Q ss_pred ecCCCcEEEEEEcCCCCCCCeEEEEec
Q psy5866 71 ATEGRAIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 71 ~~~g~~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
+.+|+.+.|.|.+ |.|.+.|+++
T Consensus 119 ~~~G~~v~l~C~~----p~p~i~W~k~ 141 (186)
T 1jbj_A 119 SRGDGSVLLTCGL----TDKTIKWLKD 141 (186)
T ss_dssp CSSSCEEEEECSS----SCSCEEEEET
T ss_pred cCCCCeEEEEeeC----CCCeEEEEEC
Confidence 3489999999986 6789999985
No 218
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.98 E-value=1.3e-09 Score=72.97 Aligned_cols=76 Identities=14% Similarity=0.160 Sum_probs=50.0
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCc-eecCCCcEEEEEEcCCCCCC---Ce
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANP-VATEGRAIELVCSTSGGSPD---PQ 91 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~-~~~~g~~~~l~C~~~~~~p~---~~ 91 (98)
..|.|.++..+ | |.|+|.+.|..+ .......+.|...|.. .+...... .+.+|+.+.|.|.+.+..|. +.
T Consensus 281 s~L~i~~~~~~-d-G~Y~C~a~n~~g---~~~~~~~l~v~~~P~~-~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~ 354 (523)
T 2rcj_C 281 SVVTVPSSSLG-T-QTYICNVNHKPS---NTKVDKRVEPLSLPSV-FLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVK 354 (523)
T ss_pred EEEEechhhcC-C-ceEEEEEEeCCC---CcceEEecCCCcCceE-EecCCCchhhcccCCceEEEEEEecccCCCCceE
Confidence 37999999999 9 999999999633 2233344444322221 12221222 37889999999999743333 58
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|+++
T Consensus 355 v~W~k~ 360 (523)
T 2rcj_C 355 FNWYVD 360 (523)
T ss_pred EEEEEC
Confidence 999985
No 219
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=98.98 E-value=2.2e-09 Score=68.18 Aligned_cols=77 Identities=17% Similarity=0.167 Sum_probs=52.2
Q ss_pred eEEEEEccceeeccCe-EEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCC-CCeE
Q psy5866 15 RYDLIISNASFERDNG-KFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSP-DPQI 92 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G-~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p-~~~~ 92 (98)
..+|.|.+++.+ |+| .|+|.+.+..+ .......+.++..|.. .+.......+.+|+.+.|.|.+. |.| .+.+
T Consensus 88 ~~~L~i~~v~~~-D~Gs~Y~C~a~n~~g---~~~~~~~~~v~~~~p~-~~~~~~~~~~~~G~~v~L~C~~~-g~p~~~~i 161 (329)
T 3oq3_B 88 NGDLWIANYTSN-DSHRRYLCTVTTKNG---DCVQGIVRSHIRKPPS-CIPETYELGTHDKYGIDLYCGIL-YAKHYNNI 161 (329)
T ss_dssp TTEEEESSCCGG-GGGCCEEEEEECTTS---CEEEEEEEEEECCCCS-CEEEEEETTSSTTTCEEEECCCC-SCCCCCEE
T ss_pred cceEEEcCCChH-hCCCcEEEEEEeCCC---ceeeEEEEEEEcCCCc-EeccccceEEeCCCcEEEEeccC-CCCCCceE
Confidence 347999999999 999 99999998532 2222222244433322 22211224467899999999885 688 8999
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 162 ~W~k~ 166 (329)
T 3oq3_B 162 TWYKN 166 (329)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99975
No 220
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.97 E-value=2.6e-09 Score=66.77 Aligned_cols=84 Identities=15% Similarity=0.217 Sum_probs=55.0
Q ss_pred EEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC------------------CCCCCEEeCCCC
Q psy5866 7 IDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT------------------PPQPPKISPGAN 68 (98)
Q Consensus 7 ~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~------------------~~~~p~i~~~~~ 68 (98)
+..+...+..+|.|.+++.+ |+|.|+|.+.+. .. .....+.+.. ....|.+.....
T Consensus 157 ~~~~~~~~~~~L~i~~~~~~-d~G~Y~C~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 230 (312)
T 2y23_A 157 MHIDRNTGIIEMFMEKLQDE-DEGTYTFQLQDG---KA--TNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLS 230 (312)
T ss_dssp EEEETTTTEEEEEESCCCGG-GCEEEEEEEESS---SC--EEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEE
T ss_pred EEEccCCCEEEEEEccCCcc-cCEeEEEEEEeC---Cc--eEEEEEEEcchhhhhhcccccccccchhhccCCceeecce
Confidence 33344566788999999999 999999999752 22 2222333310 011233311123
Q ss_pred ceecCCCcEEEEEEcCCCCCCC-eEEEEec
Q psy5866 69 PVATEGRAIELVCSTSGGSPDP-QISVTLQ 97 (98)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~p~~-~~~W~~~ 97 (98)
..+.+|+.+.|.|.+. +.|.| .+.|+++
T Consensus 231 ~~v~~G~~~~l~C~~~-~~p~~~~v~W~~~ 259 (312)
T 2y23_A 231 WEVTGECNVLLKCKVA-NIKKETHIVWYKD 259 (312)
T ss_dssp EEEETTTEEEEEEEEE-SCCSSCEEEEEET
T ss_pred EEEeCCCEEEEEEEEc-CCCCCCEEEEeeC
Confidence 5788999999999996 67776 9999875
No 221
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=98.97 E-value=1.1e-09 Score=74.12 Aligned_cols=77 Identities=14% Similarity=0.197 Sum_probs=48.5
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQI 92 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~ 92 (98)
.+..+|.|.+++.+ |+|.|+|.+.+. .......+.+.| .+....... .......+....|.|.+. |.|.|.+
T Consensus 100 r~~~SL~I~~v~~~-D~G~Y~C~~~n~---~~~~~~~~~v~v--~~~~~~~~~-~p~~~~~~~~~~L~C~a~-G~P~P~i 171 (527)
T 3qs9_E 100 RGVVSMVILKMTET-QAGEYLLFIQSE---ATNYTILFTVSI--RNTLLYTLR-RPYFRKMENQDALVCISE-SVPEPIV 171 (527)
T ss_dssp -CEEEEEESSCCSS-SCSEEEEEEEC-----CEEEEEEEEEE--C-----CEE-EEEEEECSSSSCEEEEEE-ESSCCEE
T ss_pred ceEEEEEECcCChh-hCeeEEEEEEec---cccEEEEEEEEE--CCceeeccC-CCcEEecCCceEEEEEEc-eecCCeE
Confidence 34567999999999 999999999874 233333344444 332211111 112234566678999985 8999999
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|++.
T Consensus 172 ~W~~~ 176 (527)
T 3qs9_E 172 EWVLC 176 (527)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99863
No 222
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.96 E-value=1.8e-10 Score=72.89 Aligned_cols=77 Identities=25% Similarity=0.417 Sum_probs=26.2
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC-------------------CCEEeCC-----CCce
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ-------------------PPKISPG-----ANPV 70 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~-------------------~p~i~~~-----~~~~ 70 (98)
..+|.|.+++.+ |+|.|+|.+.+. ...+..+.|.|...+. +|.+... ....
T Consensus 60 ~~~L~i~~v~~~-D~G~Y~C~a~n~----~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~ 134 (334)
T 1ry7_B 60 PQRLQVLNASHE-DSGAYSCRQRLT----QRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLA 134 (334)
T ss_dssp ----------------------------------------------------------------CCCCSCCTTCCCCEEE
T ss_pred cceEEEeecccc-cCEEEEEEEEeC----CeEEEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEE
Confidence 457999999999 999999999884 2334445566654331 2333111 1246
Q ss_pred ecCCCcEEEEEEcCCCCCCCeEEEEec
Q psy5866 71 ATEGRAIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 71 ~~~g~~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
+.+|+.+.|.|.+. |.|.+.+.|+++
T Consensus 135 v~~g~~v~l~C~~~-g~p~~~v~W~~~ 160 (334)
T 1ry7_B 135 VPAANTVRFRCPAA-GNPTPSISWLKN 160 (334)
T ss_dssp EETTCCEEEECCCC-CSSCCEEECCBT
T ss_pred ecCCCcEEEEEEcc-CCCCCeEEEEEC
Confidence 78899999999985 789999999874
No 223
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=98.96 E-value=2.5e-09 Score=58.40 Aligned_cols=51 Identities=29% Similarity=0.475 Sum_probs=38.5
Q ss_pred eeEEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC
Q psy5866 4 VEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP 58 (98)
Q Consensus 4 ~~~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~ 58 (98)
+.++.+....+..+|.|.+++.+ |+|.|+|.+.|. .+..+..+.|.|..+|
T Consensus 57 ~~~~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~a~N~---~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 57 SERLSFPADGAEHGLLLTAALPT-DAGVYVCRARNA---AGEAYAAAAVTVLEPP 107 (107)
T ss_dssp CSSEECCEETTEEEEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEEC--
T ss_pred eeeEEEeecCceEEEEEecCChh-hCEEEEEEEEEC---CCEEEEEEEEEEEcCC
Confidence 34455545566788999999999 999999999995 4566677888887654
No 224
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.51 E-value=6.4e-11 Score=70.79 Aligned_cols=77 Identities=12% Similarity=0.198 Sum_probs=51.7
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC--CCCCEEeCCCCceecCCCcEEEEEEcCCCCCC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP--PQPPKISPGANPVATEGRAIELVCSTSGGSPD 89 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~--~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~ 89 (98)
..+.++|+|.+++.+ |+|.|.|.+... .........|.|... +..|.+...... ...+.|.|.+.+..|.
T Consensus 68 ~~~~~sL~I~~v~~~-DsG~Y~C~~~~~---~~~fg~gT~L~V~~~~~~~~P~V~~~~~~----~~~vtL~C~~~gf~P~ 139 (185)
T 3c6l_A 68 REKKFSLHIADSQPG-DSATYFCAASDN---RIFFGDGTQLVVKPNIQNPEPAVYQLKDP----RSQDSTLCLFTDFDSQ 139 (185)
Confidence 456789999999999 999999998751 111122235665432 234555221111 1268999999999999
Q ss_pred CeEEEEe
Q psy5866 90 PQISVTL 96 (98)
Q Consensus 90 ~~~~W~~ 96 (98)
|.+.|..
T Consensus 140 p~v~~~~ 146 (185)
T 3c6l_A 140 INVPKTM 146 (185)
Confidence 9999964
No 225
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=98.95 E-value=1.5e-09 Score=75.24 Aligned_cols=78 Identities=21% Similarity=0.182 Sum_probs=33.0
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEe-CCCCceecCCCcEEEEEEcCCCCCCCeEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKIS-PGANPVATEGRAIELVCSTSGGSPDPQIS 93 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~~ 93 (98)
...|.|.+++.+ |+|.|+|.+.+. ....+..+.|.|..+|...... ......+.+|+.+.|.|.+. +.|.+.+.
T Consensus 289 ~~~L~i~~v~~~-d~G~Y~C~~~~~---~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~-~~p~~~v~ 363 (772)
T 3v2a_R 289 LSTLTIDGVTRS-DQGLYTCAASSG---LMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYL-GYPPPEIK 363 (772)
T ss_dssp EEEEEESSCCST-TCSEEEEEEECS---SCEEEEEEEEEEECCCC-----------------------------------
T ss_pred EEEEEECcCCcC-CCeEEEEEEEcC---CcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEe-eeCCCeEE
Confidence 457999999999 999999999974 3445667788888766443221 11346788999999999986 68899999
Q ss_pred EEec
Q psy5866 94 VTLQ 97 (98)
Q Consensus 94 W~~~ 97 (98)
|+++
T Consensus 364 W~~~ 367 (772)
T 3v2a_R 364 WYKN 367 (772)
T ss_dssp ----
T ss_pred EEEC
Confidence 9864
No 226
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=98.92 E-value=1.1e-10 Score=80.89 Aligned_cols=79 Identities=30% Similarity=0.469 Sum_probs=0.0
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEE-eCCCCceecCCCcEEEEEEcCCCCCCCeEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKI-SPGANPVATEGRAIELVCSTSGGSPDPQIS 93 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i-~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~ 93 (98)
...|+|.+++.+ |+|.|+|.+.+..++. ..+....+.|.. ..+|.+ .......+.+|+.+.|.|.+. |.|.|.+.
T Consensus 624 ~~~L~i~~~~~~-d~G~Y~C~a~n~~~~~-~~s~~~~l~v~~-~~~P~~~~~~~~~~v~~g~~~~l~C~~~-g~P~p~v~ 699 (772)
T 3v2a_R 624 ILIMELKNASLQ-DQGDYVCLAQDRKTKK-RHCVVRQLTVLE-RVAPTITGNLENQTTSIGESIEVSCTAS-GNPPPQIM 699 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEECCCCcc-CCcEEEEEEEeCCCCe-EEEEEEeecccc-cCCCEeecCCCceEEeCCCCEEEEEEeC-ccCCCeEE
Confidence 456999999999 9999999999843221 122233444431 223333 222456788999999999985 78999999
Q ss_pred EEec
Q psy5866 94 VTLQ 97 (98)
Q Consensus 94 W~~~ 97 (98)
|+++
T Consensus 700 W~k~ 703 (772)
T 3v2a_R 700 WFKD 703 (772)
T ss_dssp ----
T ss_pred EEEC
Confidence 9975
No 227
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.92 E-value=6.6e-09 Score=68.24 Aligned_cols=77 Identities=17% Similarity=0.229 Sum_probs=56.7
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCC--
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDP-- 90 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~-- 90 (98)
.....|.|.+++ . |+| |+|.+.+. ....+..+.|.|..+|....+. .....+.+|+.+.|.|.+. +.|++
T Consensus 47 ~~~~~l~i~~v~-~-d~g-Y~C~a~~~---~~~~~~~~~l~V~~~P~~~~~~-~~~~~v~~G~~v~L~C~~~-g~~~~~~ 118 (450)
T 1z7z_I 47 NNRKVYELSNVQ-E-DSQ-PMCYSNCP---DGQSTAKTFLTVYWTPERVELA-PLPSWQPVGKNLTLRCQVE-GGAPRAN 118 (450)
T ss_dssp TTEEEEEEEEEC-S-CBC-CEEEEEET---TEEEEEECEEEEEBCCSEEEEC-CCCSEECTTSEEEEEEEEE-CCBCGGG
T ss_pred CCceEEEEEecc-c-CCe-eEEEEeCC---CCcceeEEEEEEEeCCCcceec-CCCceEeeCCeEEEEEEec-CCCCCcC
Confidence 345578999985 4 889 99999763 3455666788888766543233 2447899999999999986 55666
Q ss_pred -eEEEEec
Q psy5866 91 -QISVTLQ 97 (98)
Q Consensus 91 -~~~W~~~ 97 (98)
.+.|+++
T Consensus 119 ~~v~W~k~ 126 (450)
T 1z7z_I 119 LTVVLLRG 126 (450)
T ss_dssp EEEEEEET
T ss_pred cEEEEeeC
Confidence 8999985
No 228
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.91 E-value=4.6e-09 Score=69.77 Aligned_cols=79 Identities=16% Similarity=0.174 Sum_probs=51.5
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEE--eCCCCceecCCCcEEEEEEcCCCCC-CCe
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKI--SPGANPVATEGRAIELVCSTSGGSP-DPQ 91 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i--~~~~~~~~~~g~~~~l~C~~~~~~p-~~~ 91 (98)
...|+|.+++.+ |+|.|+|.+.+..+. ......+.+.....+|.+ .+.....+.+|+.+.|.|.+.+.+| .+.
T Consensus 308 ~~~L~I~~~~~~-d~G~Y~C~a~n~~~~---~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~ 383 (475)
T 1iga_A 308 SSVLPGCAEPWN-HGKTFTCTAAYPESK---TPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVL 383 (475)
T ss_pred EEEEEEchHHhc-cCCcEEEEEEcCCCC---CceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCE
Confidence 346999999999 999999999986332 112223322122333443 2222234678999999999975555 359
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|+++
T Consensus 384 v~W~k~ 389 (475)
T 1iga_A 384 VRWLQG 389 (475)
T ss_pred EEEEEC
Confidence 999975
No 229
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.90 E-value=3e-10 Score=71.27 Aligned_cols=77 Identities=10% Similarity=0.225 Sum_probs=53.2
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCC-eEEEE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDP-QISVT 95 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~ 95 (98)
.|.|.++... |+|.|+|.+.+... .......+.|.|..+|.. .+.......+.+|+.+.|.|.+. |.|.| .+.|+
T Consensus 173 ~l~i~~~~~~-d~g~Y~C~a~n~~~-~~~~~~~~~l~V~~~P~~-~~~~~~~~~~~~g~~v~l~C~~~-g~P~p~~v~W~ 248 (308)
T 4fom_A 173 QYKLFPTRFA-RGRRITCVVKHPAL-EKDIRYSFILDIQYAPEV-SVTGYDGNWFVGRKGVNLKCNAD-ANPPPFKSVWS 248 (308)
T ss_dssp EEEECCCGGG-TTCEEEEEEECTTC-SSCEEEEEECCCCEEEEE-CCBCCCSCEETTCCSCEEECCEE-EESCEEEEECC
T ss_pred cceEEeeeec-CCccEEEEEEccCC-CCceEEeEEEEEecCCee-EEcccceeeeeccccEEEEEEEe-cCCCCcEEEEE
Confidence 5889999999 99999999998633 233334455555433321 12222445677889999999986 67877 69998
Q ss_pred ec
Q psy5866 96 LQ 97 (98)
Q Consensus 96 ~~ 97 (98)
++
T Consensus 249 k~ 250 (308)
T 4fom_A 249 RL 250 (308)
T ss_dssp BS
T ss_pred EC
Confidence 74
No 230
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.88 E-value=3.7e-10 Score=72.43 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=55.2
Q ss_pred CCCeEEEEEccceeeccCe-EEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCC
Q psy5866 12 DSGRYDLIISNASFERDNG-KFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDP 90 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G-~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~ 90 (98)
.....+|.|.+++.. |+| .|+|.+.+. ....+..+.+.|..+| .+. ...+.+|+.+.|.|.+. |.|.|
T Consensus 208 ~~~~~~L~i~~v~~~-D~G~~Y~C~a~n~---~g~~~~~~~l~V~~~P---~i~---~~~~~~g~~v~l~C~~~-g~P~p 276 (347)
T 2ifg_A 208 GLPSLGLTLANVTSD-LNRKNVTCWAEND---VGRAEVSVQVNVSFPA---SVQ---LHTAVEMHHWCIPFSVD-GQPAP 276 (347)
T ss_dssp CSSEEEEEEESCCST-TTTCCEEECCEET---TEECCEEECCCCBEEE---EEE---ECCCEESSSEEEEEEEE-EESCC
T ss_pred ecccceEEEeeCChH-HCCCeEEEEEEcC---CCCEEEEEEEEEcCCC---eee---eccCccCceEEEEEEee-ecCCC
Confidence 345678999999999 999 999999985 3444455555554333 321 12345789999999996 78999
Q ss_pred eEEEEec
Q psy5866 91 QISVTLQ 97 (98)
Q Consensus 91 ~~~W~~~ 97 (98)
.+.|+++
T Consensus 277 ~i~W~~~ 283 (347)
T 2ifg_A 277 SLRWLFN 283 (347)
T ss_dssp EEEEEET
T ss_pred cEEEEeC
Confidence 9999875
No 231
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.87 E-value=1.1e-08 Score=55.96 Aligned_cols=53 Identities=19% Similarity=0.248 Sum_probs=41.2
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCE
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPK 62 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~ 62 (98)
++.+....+...|.|.+++.+ |+|.|+|.+.|. ....+..+.|.|...|.+|.
T Consensus 53 ~~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~a~N~---~g~~~~~~~l~V~~~p~~P~ 105 (114)
T 2cqv_A 53 HMKVENSENGSKLTILAARQE-HCGCYTLLVENK---LGSRQAQVNLTVVDKPDPPA 105 (114)
T ss_dssp SEEEEECSSEEEEEETTCCTT-TCEEEEEEEECS---SCEEECCEEEEEECSCSCCC
T ss_pred CEEEEEcCCEEEEEECCCChh-cCEEEEEEEEEC---CCcEEEEEEEEEECCCCCCC
Confidence 444444555778999999999 999999999985 44566678899987776654
No 232
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.85 E-value=1.2e-08 Score=63.27 Aligned_cols=68 Identities=18% Similarity=0.336 Sum_probs=47.5
Q ss_pred eeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC-CCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEEEEe
Q psy5866 24 SFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP-PQPPKISPGANPVATEGRAIELVCSTSGGSPDPQISVTL 96 (98)
Q Consensus 24 ~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~-~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~ 96 (98)
... |+|.|+|.+.+.. ....+..+.+.|... +....+.+ ....+.+|+.+.|.|.+. +.|.|.+.|++
T Consensus 149 ~~~-d~G~Y~C~a~n~~--~~~~s~~~~l~v~~~~~p~i~~~~-~~~~v~~G~~v~L~C~~~-g~p~p~v~W~~ 217 (289)
T 3mjg_X 149 GIF-EDRSYICKTTIGD--REVDSDAYYVYRLQVSSINVSVNA-VQTVVRQGENITLMCIVI-GNEVVNFEWTY 217 (289)
T ss_dssp ECC-CSSEEEEEEEETT--EEEECCCEEEEECCCCCCCCEEEE-SCSEEETTSCEEEEEEEE-SCSSBEEEEEC
T ss_pred eec-cCcEEEEEEEeCC--ceeeeeeEEEEecCCCCCCcEEeC-CcceeEcCCCEEEEEEEC-CCCCcceEEEc
Confidence 467 9999999998742 233344456666542 22223332 346789999999999996 68999999984
No 233
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=98.85 E-value=1.3e-08 Score=68.09 Aligned_cols=77 Identities=14% Similarity=0.265 Sum_probs=54.9
Q ss_pred EEEEccceeeccCe-EEEEEEEECCCCCeeeEeeEEEEEEC-CCCCCEEe-CCCCceecCCCcEEEEEEcCCCCCCCe-E
Q psy5866 17 DLIISNASFERDNG-KFECRLKAAGSGQDLHSQVYTVTVLT-PPQPPKIS-PGANPVATEGRAIELVCSTSGGSPDPQ-I 92 (98)
Q Consensus 17 ~l~I~~v~~~~d~G-~y~C~~~~~~~~~~~~~~~~~l~v~~-~~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~p~~~-~ 92 (98)
.|.|.+++.+ |+| .|+|.+.+... ...+..+.|.|.. +..+|.+. ......+.+|+.+.|.|.+. +.|.+. +
T Consensus 169 ~L~i~~~~~~-d~G~~Y~C~a~n~~~--~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~-g~p~p~~i 244 (524)
T 2ec8_A 169 GIMIKSVKRA-YHRLCLHCSVDQEGK--SVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIK-DVSSSVYS 244 (524)
T ss_dssp EEEEESCCGG-GTTCEEEEEEC------CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEE-ESSTTCEE
T ss_pred cEEEeccchh-hCCceEEEEEEECCc--eEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEe-cCCCcEEE
Confidence 5999999999 999 99999987521 2224456777762 23445552 22345789999999999997 677776 9
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 245 ~W~~~ 249 (524)
T 2ec8_A 245 TWKRE 249 (524)
T ss_dssp EEEET
T ss_pred EEEeC
Confidence 99975
No 234
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=98.84 E-value=4.1e-10 Score=70.77 Aligned_cols=77 Identities=13% Similarity=0.113 Sum_probs=51.9
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeC--CCCceecCCCcEEEEEEcC-----CCCCC
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISP--GANPVATEGRAIELVCSTS-----GGSPD 89 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~--~~~~~~~~g~~~~l~C~~~-----~~~p~ 89 (98)
+|.|.+++.+ |+|.|+|.+.+.. ......+.+.+...+....+.. .....+.+|+.+.|.|.+. .|.|.
T Consensus 63 ~L~i~~v~~~-D~G~Y~C~a~n~~---g~~~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~ 138 (315)
T 1itb_B 63 KLWFVPAKVE-DSGHYYCVVRNSS---YCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNEL 138 (315)
T ss_dssp BEECTTCCGG-GCSCCEECCCSSS---CCCCEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCC
T ss_pred eEEECCCChh-hCEEEEEEEeCCc---eEEEEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCC
Confidence 6999999999 9999999998752 2233333444432221111110 0124678899999999972 58899
Q ss_pred CeEEEEec
Q psy5866 90 PQISVTLQ 97 (98)
Q Consensus 90 ~~~~W~~~ 97 (98)
+.+.|+++
T Consensus 139 ~~i~W~k~ 146 (315)
T 1itb_B 139 PKLQWYKD 146 (315)
T ss_dssp CCCEEEET
T ss_pred CEEEEEEC
Confidence 99999975
No 235
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.84 E-value=1.5e-08 Score=64.37 Aligned_cols=74 Identities=18% Similarity=0.287 Sum_probs=57.7
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCC--eEEE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDP--QISV 94 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~--~~~W 94 (98)
.+.|++++.+ |.|.|++... ....+..+.|.|+.+|..+.|... ...+.+|+.++|+|.+.++.|.+ +++|
T Consensus 51 ~~~l~~v~~~---~~y~C~~~~~---~~~~~~~v~l~V~~~P~~v~I~~~-~~~~~~G~~~~LtC~v~g~~P~~~l~itW 123 (291)
T 1mq8_A 51 VYELSNVQED---SQPMCYSNCP---DGQSTAKTFLTVYWTPERVELAPL-PSWQPVGKNLTLRCQVEGGAPRANLTVVL 123 (291)
T ss_dssp EEEEESCCSC---CCCEEEEECS---SCEEEEECEEEECBCCSCCCBCCC-CSBCCSSCCCEEEEEECCCBSTTTEEEEE
T ss_pred EEEEEecccC---CeEEEEEEcC---CccEEEEEEEEEecCCCCCEEecC-CccccCCCCEEEEEEecCccCCCCcEEEE
Confidence 4788887743 4699999753 246667789999999998888642 34688999999999999888875 5899
Q ss_pred Eec
Q psy5866 95 TLQ 97 (98)
Q Consensus 95 ~~~ 97 (98)
+++
T Consensus 124 ~kg 126 (291)
T 1mq8_A 124 LRG 126 (291)
T ss_dssp ESS
T ss_pred EEC
Confidence 975
No 236
>3tjh_C 42F3 alpha; IG MHC, antigen recognition, TCR-PMHC, membrane receptor, IM system; 2.12A {Mus musculus} PDB: 3tpu_A 3tfk_C 1j8h_D* 1fyt_D* 4gkz_A* 3rev_A 1mwa_A* 1g6r_A* 1tcr_A* 2ckb_A 1zgl_M 3c5z_A 1i9e_A* 2oi9_B 2e7l_A 2icw_I 3e2h_B 3e3q_D 4h1l_G
Probab=98.83 E-value=1.5e-08 Score=62.31 Aligned_cols=84 Identities=13% Similarity=0.226 Sum_probs=53.7
Q ss_pred EeCCCCeEEEEEccceeeccCeEEEEEEEECC-CCCeeeEeeEEEEEECC--CCCCEEeCCCCceecCCCcEEEEEEcCC
Q psy5866 9 YRPDSGRYDLIISNASFERDNGKFECRLKAAG-SGQDLHSQVYTVTVLTP--PQPPKISPGANPVATEGRAIELVCSTSG 85 (98)
Q Consensus 9 ~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~-~~~~~~~~~~~l~v~~~--~~~p~i~~~~~~~~~~g~~~~l~C~~~~ 85 (98)
.+...+.++|+|.+++.+ |+|.|.|.+.... ...........|.|... +..|.+..... . . ..++|.|.+.+
T Consensus 75 ~~~~~~~~sLtI~~lq~~-DSG~YyCa~~~~~~~~~~~fG~GT~LtV~~~~~~~~P~V~~~~~--~-~-~~~tl~Cl~~~ 149 (226)
T 3tjh_C 75 FSKSDSSFHLRKASVHWS-DSAVYFCAVSAKGTGSKLSFGKGAKLTVSPNIQNPDPAVYQLRD--S-K-SSDKSVCLFTD 149 (226)
T ss_dssp EETTTTEEEEEESSCCGG-GCEEEEEEEEESSCSSSEEECCCEEEEEECCCSSCCCEEEEEEE--C-C----CEEEEEES
T ss_pred EcCCCCEEEEEEecCCcc-cCCCEEEEEEecCCccccccCCCeEEEEeCCCCCCCCEEEEccc--C-C-CCeEEEEEccc
Confidence 346778999999999999 9999999998531 11122222346777643 34455521111 1 1 23689999999
Q ss_pred CCCCCeEEEEec
Q psy5866 86 GSPDPQISVTLQ 97 (98)
Q Consensus 86 ~~p~~~~~W~~~ 97 (98)
..|..++.|+++
T Consensus 150 f~P~i~v~~~~~ 161 (226)
T 3tjh_C 150 FDSQTNVSQSKD 161 (226)
T ss_dssp CCTTCCCCCCSC
T ss_pred ccCCcEEEeecc
Confidence 898667888764
No 237
>3mbe_C I-AG7; T cell receptor, histocompatability antigen, MHC class II, I immune system; HET: NAG; 2.89A {Mus musculus}
Probab=98.83 E-value=6.9e-09 Score=63.90 Aligned_cols=83 Identities=14% Similarity=0.217 Sum_probs=54.9
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECC-CCCeeeEeeEEEEEECC--CCCCEEeCCCCceecCCCcEEEEEEcCCC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAG-SGQDLHSQVYTVTVLTP--PQPPKISPGANPVATEGRAIELVCSTSGG 86 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~-~~~~~~~~~~~l~v~~~--~~~p~i~~~~~~~~~~g~~~~l~C~~~~~ 86 (98)
+...+.++|+|.+++.+ |+|.|.|.+.... ...........|.|... +..|.+.... ..+ ..++|.|.+.+.
T Consensus 64 ~~~~~~~sLtI~~lq~~-DSG~Y~Ca~~~~~~~~~~~fG~GT~L~V~~~~~~p~P~Vf~~~---~~~-~~vtl~Cl~~gf 138 (229)
T 3mbe_C 64 NSKERYSTLHIKDAQLE-DSGTYFCAAEDGGSGNKLIFGTGTLLSVKPNIQNPEPAVYQLK---DPR-SQDSTLCLFTDF 138 (229)
T ss_dssp ETTTTEEEEEECSCCST-TCBEEEEEEECSSSTTCEEECCCCEEEEECCCSSCCCEEEEEE---CTT-CTTCEEEEEESC
T ss_pred CCCCCEEEEEEECCccc-CCCCEEEEEEeCCCcccceeCCCEEEEEecccCCCCCEEEEcc---CCC-CCEEEEEEcccc
Confidence 46778899999999999 9999999998531 11122223346777643 3445552111 111 237899999988
Q ss_pred CCCCeEEEEec
Q psy5866 87 SPDPQISVTLQ 97 (98)
Q Consensus 87 ~p~~~~~W~~~ 97 (98)
.|..++.|+++
T Consensus 139 ~P~i~v~~~~~ 149 (229)
T 3mbe_C 139 DSQINVPKTME 149 (229)
T ss_dssp CSSSCCCCCCS
T ss_pred CCceEeEeecc
Confidence 88667888764
No 238
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.83 E-value=2.6e-09 Score=70.26 Aligned_cols=78 Identities=15% Similarity=0.272 Sum_probs=49.0
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEE-ECCCCCCEE--eCCCCceecCCCcEEEEEEcCCCCCCC-
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTV-LTPPQPPKI--SPGANPVATEGRAIELVCSTSGGSPDP- 90 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v-~~~~~~p~i--~~~~~~~~~~g~~~~l~C~~~~~~p~~- 90 (98)
..+|+|.+++.+ |+|.|+|.+.+..+.. .... .+.+ .....+|.+ .......+..| .+.|.|.+.+.+|.+
T Consensus 304 ~~~L~I~~v~~~-d~G~Y~C~a~n~~~~~-~~~~--~v~~~~~~~~~P~v~~~~~~~~~~~~~-~~~L~C~~~g~~P~~~ 378 (444)
T 1igt_B 304 VSALPIQHQDWM-SGKEFKCKVNNKDLPA-PIER--TISKPKGSVRAPQVYVLPPPEEEMTKK-QVTLTCMVTDFMPEDI 378 (444)
T ss_dssp EEEEECCHHHHH-TTCEEEEEEECTTCSS-CEEE--EEECCCCCCBCCEEEEECCCGGGTTSS-EEEEEEEEEEEBSSCC
T ss_pred EEEEEEcHHHhc-cCCcEEEEEEcCCCCC-ceEE--EEeccCCCCCCCEEEEeCCChHHccCC-eEEEEEEEEeeeCCCC
Confidence 347999999999 9999999999864322 1122 2221 122334444 22122233444 599999997546666
Q ss_pred eEEEEec
Q psy5866 91 QISVTLQ 97 (98)
Q Consensus 91 ~~~W~~~ 97 (98)
.+.|+++
T Consensus 379 ~v~W~k~ 385 (444)
T 1igt_B 379 YVEWTNN 385 (444)
T ss_dssp EEEEEET
T ss_pred EEEEEEC
Confidence 8999975
No 239
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.82 E-value=1e-08 Score=55.21 Aligned_cols=50 Identities=22% Similarity=0.226 Sum_probs=38.3
Q ss_pred eeEEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC
Q psy5866 4 VEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ 59 (98)
Q Consensus 4 ~~~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~ 59 (98)
+.++.+....+...|.|.++..+ |+|.|+|.+.|. ..+..+.|.|..+|.
T Consensus 49 ~~r~~i~~~~~~~~L~I~~v~~~-D~G~Y~C~a~N~-----~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 49 SDRLKVVQKGRIHKLVIANALTE-DEGDYVFAPDAY-----NVTLPAKVHVISGPS 98 (100)
T ss_dssp CSSEEEEECSSEEEEEESSCCGG-GCSEEEEEESSS-----CCCEEEEEEEECCSC
T ss_pred CCcEEEEEeCCEEEEEECCCChh-hCEEEEEEEcCC-----CeeEEEEEEEeCCCC
Confidence 34455555566778999999999 999999999873 345667888887664
No 240
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=98.82 E-value=1.7e-09 Score=68.57 Aligned_cols=77 Identities=10% Similarity=0.146 Sum_probs=48.8
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEE--eCCCCceecCCCcEEEEEEcCCCCCCC---e
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKI--SPGANPVATEGRAIELVCSTSGGSPDP---Q 91 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i--~~~~~~~~~~g~~~~l~C~~~~~~p~~---~ 91 (98)
.|+|.++... |+|.|+|++.+. .......+.+.+......|.+ .......+.+|+.+.|.|.+.+..|.+ .
T Consensus 73 ~l~i~~~~~~-d~g~Y~C~a~n~---~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~ 148 (323)
T 2wqr_A 73 ELTLSQKHWL-SDRTYTCQVTYQ---GHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQ 148 (323)
T ss_dssp EEEEEHHHHH-TTCCEEEEEEET---TEEEEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCE
T ss_pred EEEEcHHHcC-CCCcEEEEEEeC---CCCcceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceE
Confidence 4778888888 999999999985 222222211111111222322 222234578899999999987556666 8
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|+++
T Consensus 149 i~W~k~ 154 (323)
T 2wqr_A 149 LTWSRA 154 (323)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 999984
No 241
>2bnu_A TCR alpha chain, T-cell receptor alpha chain C region; superagonist peptide T-cell vaccines, transmembrane, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2bnq_D 2bnr_D 2f54_D 2pyf_A* 2pye_D* 2f53_D 2p5e_D* 2p5w_D* 3mv7_D 3mv8_D 3mv9_D 3utt_D 2cdg_A
Probab=98.82 E-value=3e-08 Score=59.70 Aligned_cols=78 Identities=14% Similarity=0.178 Sum_probs=51.0
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECCC--CCeeeEeeEEEEEECC--CCCCEEeCCCCceecCCCcEEEEEEcCC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAGS--GQDLHSQVYTVTVLTP--PQPPKISPGANPVATEGRAIELVCSTSG 85 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~--~~~~~~~~~~l~v~~~--~~~p~i~~~~~~~~~~g~~~~l~C~~~~ 85 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+... ..........|.|... +..|.+..... ....++|.|.+.+
T Consensus 66 ~~~~~~~sL~I~~v~~~-Dsg~Y~C~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~~----~~~~~~L~C~~~g 140 (203)
T 2bnu_A 66 DKSSGRSTLYIAASQPG-DSATYLCAVRPTSGGSYIPTFGRGTSLIVHPYIQNPDPAVYQLRR----SKSSDKSVCLFTD 140 (203)
T ss_dssp ETTTTEEEEEESSCCGG-GCEEEEEEEEECSSSTTCCEECCCEEEEEECCCSSCCCEEEEECC----SSSSSCEEEEEES
T ss_pred cCCCCEEEEEEeeCCcc-cCeEEEEEEEcCcCcceeeeeCCCEEEEEeCCCCCCCCeEEecCC----CCCCcEEEEEccc
Confidence 45677899999999999 99999999987310 0112223357777653 24455522111 1136799999987
Q ss_pred CCCCCeE
Q psy5866 86 GSPDPQI 92 (98)
Q Consensus 86 ~~p~~~~ 92 (98)
..|.|.+
T Consensus 141 ~~P~p~v 147 (203)
T 2bnu_A 141 FDSQTNV 147 (203)
T ss_dssp CCTTCCC
T ss_pred cccCccc
Confidence 6888755
No 242
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.81 E-value=1.2e-08 Score=57.53 Aligned_cols=45 Identities=18% Similarity=0.383 Sum_probs=38.5
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC-CCCCCEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT-PPQPPKI 63 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~-~~~~p~i 63 (98)
.++|+|.++... |+|.|+|.+.+. ....+..+.|+|.+ ++..|.+
T Consensus 74 ~~~L~I~~v~~~-DaG~Y~Cevsn~---~g~~~~~~~L~V~~~~~~~p~~ 119 (126)
T 2dav_A 74 TFEMQIIKAKDN-FAGNYRCEVTYK---DKFDSCSFDLEVHESTGTTPNI 119 (126)
T ss_dssp EEEEEECSCCTT-SCEEEEEEEECS---SCEEEECCEEEEECCCCSCCCC
T ss_pred eEEEEEccCCcc-cCEEEEEEEEeC---CCcEEEEEEEEEEecCCCCCeE
Confidence 588999999999 999999999996 46677788999998 6666655
No 243
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=98.81 E-value=1.9e-08 Score=64.72 Aligned_cols=77 Identities=12% Similarity=0.059 Sum_probs=55.3
Q ss_pred EEEEEccceeecc------CeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCC-
Q psy5866 16 YDLIISNASFERD------NGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSP- 88 (98)
Q Consensus 16 ~~l~I~~v~~~~d------~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p- 88 (98)
.+|.|.+++.. | +|.|+|.+.+..+ ...+..+.+.+..+|..... .....+.+|+.+.|.|.+.+..+
T Consensus 59 ~~L~i~~~~~~-d~~~~~d~G~Y~C~a~n~~g--~~~s~~~~v~v~~~p~~~~~--~~~~~v~~G~~v~l~C~~~~~~~~ 133 (388)
T 2v5m_A 59 GKLVFPPFRAE-DYRQEVHAQVYACLARNQFG--SIISRDVHVRAVVAQYYEAD--VNKEHVIRGNSAVIKCLIPSFVAD 133 (388)
T ss_dssp TEEEECCCCGG-GCCHHHHEEEEEEEEEETTE--EEECCCEEEEEECCCCCCCB--CCCEEEETTSCEEECCBCCTTTTT
T ss_pred ceEEecccChh-hccccccCceEEEEEEccCC--eEEecceEEEEccccccccC--ccceeeecCCcEEEEEECcCCCCC
Confidence 36999999998 7 9999999998522 22344567777665543222 24568899999999999864333
Q ss_pred -CCeEEEEec
Q psy5866 89 -DPQISVTLQ 97 (98)
Q Consensus 89 -~~~~~W~~~ 97 (98)
.+.+.|+++
T Consensus 134 ~~~~v~W~~~ 143 (388)
T 2v5m_A 134 FVEVVSWHTD 143 (388)
T ss_dssp TEEEEEEEET
T ss_pred CcceEEEEeC
Confidence 378999975
No 244
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.81 E-value=2.5e-09 Score=64.19 Aligned_cols=72 Identities=14% Similarity=0.224 Sum_probs=44.7
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC----------------------------CCCCCEEeCC
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT----------------------------PPQPPKISPG 66 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~----------------------------~~~~p~i~~~ 66 (98)
..+|.|.+++.+ |+|.|+|.+.+. . +..+.+.|.. ....+.+...
T Consensus 48 ~~~L~i~~v~~~-DsG~Y~C~~~~~----~--s~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (204)
T 1sy6_A 48 KKKWNLGSNAKD-PRGMYQCKGSQN----K--SKPLQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQT 120 (204)
T ss_dssp CCCEEEEEGGGC-CEEEEEEESSSS----C--CCCEEEEEEC------------------------------------CC
T ss_pred CCeEEeCCCCcC-CCEEEEEEecCC----C--CeeEEEEEEEeccccccccccccccccccccccccccccccccceecC
Confidence 346999999999 999999996432 1 1223444430 0012223221
Q ss_pred CCceec-CCCcEEEEEEcCCCCCCCeEEEEec
Q psy5866 67 ANPVAT-EGRAIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 67 ~~~~~~-~g~~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
+ ..+. +|+.+.|.|. +.|.|.+.|+++
T Consensus 121 p-~~v~~~G~~v~L~C~---g~p~p~i~W~k~ 148 (204)
T 1sy6_A 121 P-YKVSISGTTVILTCP---QYPGSEILWQHN 148 (204)
T ss_dssp C-CEEEEETTEEEEECS---CCCSSCEEEEET
T ss_pred C-ceeeecCCcEEEEcC---CCCCCceEEEEC
Confidence 2 2344 8999999997 578889999875
No 245
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.80 E-value=5.8e-09 Score=63.61 Aligned_cols=75 Identities=19% Similarity=0.288 Sum_probs=48.7
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC---CCCCEE--eCCCCceecCCCcEEEEEEcCCCCC-C
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP---PQPPKI--SPGANPVATEGRAIELVCSTSGGSP-D 89 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~---~~~p~i--~~~~~~~~~~g~~~~l~C~~~~~~p-~ 89 (98)
.+|+|.+++.+ |+|.|+|.+.+... . ..+.+.|... ..+|.+ .. +......+..+.|.|.+.+.+| .
T Consensus 77 s~L~I~~~~~~-D~g~Y~C~~~~~~~---~--~~~~~~v~~~~~~~~~P~v~v~~-~~~~~~~~~~~~L~C~~~g~~P~~ 149 (231)
T 2w59_A 77 SAVPVSTQDWL-SGERFTCTVQHEEL---P--LPLSKSVYRNTGPTTPPLIYPFA-PHPEELSLSRVTLSCLVRGFRPRD 149 (231)
T ss_dssp EEEECCHHHHH-TTCCEEEEEECTTC---S--SCEEEEECCCCSCCBCCEEEEEC-CCGGGGGSSEEEEEEEEEEEBSSC
T ss_pred EEEEecchhcc-CCCEEEEEEEcCCC---C--CceEEEEecCCCCCcCCEEEEeC-CCHHHhccCceEEEEEEEeccCCC
Confidence 36999999999 99999999998532 1 2334444321 234443 22 1112233557999999975556 4
Q ss_pred CeEEEEec
Q psy5866 90 PQISVTLQ 97 (98)
Q Consensus 90 ~~~~W~~~ 97 (98)
+.+.|+++
T Consensus 150 ~~v~W~k~ 157 (231)
T 2w59_A 150 IEIRWLRD 157 (231)
T ss_dssp CEEEEEET
T ss_pred cEEEEEEC
Confidence 79999985
No 246
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.80 E-value=3.3e-09 Score=65.20 Aligned_cols=79 Identities=11% Similarity=0.217 Sum_probs=49.4
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEE--eCCCCceecCCCcEEEEEEcCCCCCC-Ce
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKI--SPGANPVATEGRAIELVCSTSGGSPD-PQ 91 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i--~~~~~~~~~~g~~~~l~C~~~~~~p~-~~ 91 (98)
..+|+|.+++.+ |+|.|+|.+.+..... .....+.+ +.....+|.+ .. .......|..+.|.|.+.+.+|+ ..
T Consensus 81 ~s~L~I~~~~~~-D~g~Y~C~~~~~~~~~-~~~~~v~~-~~~~~~~P~v~v~~-~~~~~~~g~~~~L~C~~~g~~P~~~~ 156 (239)
T 1i1c_A 81 VSELPIVERDWL-NGKTFKCKVNSGAFPA-PIEKSISK-PEGTPRGPQVYTMA-PPKEEMTQSQVSITCMVKGFYPPDIY 156 (239)
T ss_dssp EEEEECCHHHHH-TTCCEEEEEECSSSSS-CEEEEECC-CSSCCBCCEEEEEC-CCGGGGGSSEEEEEEEEEEEBSSCCE
T ss_pred EEEEEEEhhHcc-CCCeEEEEEecccCCC-CcEEEEec-CCCCCcCCEEEEEC-CChHHhcCCcEEEEEEEeeeECCCeE
Confidence 347999999999 9999999999853311 11111111 0112234443 22 22223457889999999755665 58
Q ss_pred EEEEec
Q psy5866 92 ISVTLQ 97 (98)
Q Consensus 92 ~~W~~~ 97 (98)
+.|+++
T Consensus 157 v~W~k~ 162 (239)
T 1i1c_A 157 TEWKMN 162 (239)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 999975
No 247
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=98.79 E-value=4.9e-09 Score=66.45 Aligned_cols=75 Identities=11% Similarity=0.207 Sum_probs=48.8
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC---CCCCCEE--eCCCCceecCCCcEEEEEEcCCCCCCC
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT---PPQPPKI--SPGANPVATEGRAIELVCSTSGGSPDP 90 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~---~~~~p~i--~~~~~~~~~~g~~~~l~C~~~~~~p~~ 90 (98)
..|+|.+++.+ |+|.|+|.+.+... .. ...+.|.. ...+|.+ .... .....|+.+.|.|.+.+..|.+
T Consensus 178 ~~L~I~~~~~~-D~G~Y~C~a~n~~~---~~--~~~~~v~~~~~~~~~P~v~~~~~~-~~~~~g~~~~l~C~~~g~~p~~ 250 (323)
T 2wqr_A 178 STLPVGTRDWI-EGETYQCRVTHPHL---PR--ALMRSTTKTSGPRAAPEVYAFATP-EWPGSRDKRTLACLIQNFMPED 250 (323)
T ss_dssp EEEECCHHHHH-TTCCEEEEEECTTS---SS--CEEEEECCCCSCCBCCEEEEEECC-CCTTCTTEEEEEEEEEEEBSSC
T ss_pred EEEEECHHHcc-CCCCEEEEEECCCC---CC--CeeeEEEccCCCCCCCEEEEeCCC-hHHhcCCcEEEEEEeeeeeCCC
Confidence 36999999999 99999999998531 11 22344422 2234443 2212 1223499999999987545544
Q ss_pred -eEEEEec
Q psy5866 91 -QISVTLQ 97 (98)
Q Consensus 91 -~~~W~~~ 97 (98)
.+.|+++
T Consensus 251 ~~v~W~k~ 258 (323)
T 2wqr_A 251 ISVQWLHN 258 (323)
T ss_dssp CEEEEEET
T ss_pred cEEEEEEC
Confidence 8999975
No 248
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.78 E-value=1.3e-07 Score=58.21 Aligned_cols=69 Identities=20% Similarity=0.494 Sum_probs=51.8
Q ss_pred EEEEccc---eeeccCeE--EEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCe
Q psy5866 17 DLIISNA---SFERDNGK--FECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQ 91 (98)
Q Consensus 17 ~l~I~~v---~~~~d~G~--y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~ 91 (98)
.+.+..+ +.. |+|. |+|.+.+. ....+..+.|.|...|. |.+.. ....+.+|+.+.|.|.+. |.+.
T Consensus 57 ~~~~~~~~~~~~~-d~g~g~Y~C~a~n~---~~~~~~~~~l~V~~~p~-p~~~~-~~~~v~~G~~v~l~C~~~---p~~~ 127 (265)
T 2oz4_A 57 SFSAKASVSVTAE-DEGTQRLTCAVILG---NQSQETLQTVTIYSFPA-PNVIL-TKPEVSEGTEVTVKCEAH---PRAK 127 (265)
T ss_dssp EEEEEEEEEECGG-GCEEEEEEEEEEET---TEEEEEEEEEEEECCCC-CEEEE-SCSEEETTCEEEEEEECC---TTSE
T ss_pred eEEEEeecccccc-cCCcceEEEEEecC---CCCcEEEEEEEEeCCCC-ceeec-CCceecCCCcEEEEEEcc---CCCE
Confidence 3555444 678 8885 99999995 45566778888876655 55543 356788999999999985 7899
Q ss_pred EEE
Q psy5866 92 ISV 94 (98)
Q Consensus 92 ~~W 94 (98)
+.|
T Consensus 128 i~W 130 (265)
T 2oz4_A 128 VTL 130 (265)
T ss_dssp EEE
T ss_pred EEE
Confidence 999
No 249
>3rgv_A YAE62 TCR A chain; TCR, MHC, MHC class I, immune system; 2.90A {Mus musculus} PDB: 3c60_A
Probab=98.75 E-value=5.2e-09 Score=63.23 Aligned_cols=80 Identities=10% Similarity=0.115 Sum_probs=52.7
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC--CCCCEEeCCCCceecCCCcEEEEEEcCCCCC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP--PQPPKISPGANPVATEGRAIELVCSTSGGSP 88 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~--~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p 88 (98)
...+.++|+|++++.+ |+|.|.|.+.... .........|.|... +..|.+.... ... ..++|.|.+.+..|
T Consensus 67 ~~~~~~sL~I~~l~~~-DsG~Y~Ca~~~~~--~~~fG~GT~L~V~~~~~~~~P~V~~~~--~~~--~~~tl~Cl~~gf~P 139 (200)
T 3rgv_A 67 KGTTSFHLQKTSVQEI-DSAVYYCAANSGT--YQRFGTGTKLQVVPNIQNPDPAVYQLR--DSK--SSDKSVCLFTDFDS 139 (200)
T ss_dssp TTTTBCCEEESSCCST-TCEEEEEEEESSS--CCCCCCCEEEEEECCCSSCCCEEEEEE--ESS--SSSCEEEEEESCCT
T ss_pred CCCCEEEEEEcCCcCc-cCCCEEEEeccCc--ccccCcCEEEEEeCCCCCCCCeEEEcc--CCC--CCceEEEEcccccC
Confidence 5667889999999999 9999999986421 112223346677643 4456552111 111 22679999998888
Q ss_pred CCeEEEEec
Q psy5866 89 DPQISVTLQ 97 (98)
Q Consensus 89 ~~~~~W~~~ 97 (98)
..++.|+++
T Consensus 140 ~i~v~~~~~ 148 (200)
T 3rgv_A 140 QTNVSQSKD 148 (200)
T ss_dssp TCCCCCCSS
T ss_pred CeEeEeccC
Confidence 667888764
No 250
>1oga_D T-cell receptor alpha chain V region, beta-2-microglobulin; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2xna_A 2xn9_A 2vlm_D 2vlk_D 2vlj_D 2vlr_D 2cdf_A 2wbj_C* 3qdm_D 3qeq_D
Probab=98.74 E-value=1e-07 Score=58.02 Aligned_cols=77 Identities=13% Similarity=0.135 Sum_probs=50.3
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC--CCCCEEeCCCCceecCCCcEEEEEEcCCCC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP--PQPPKISPGANPVATEGRAIELVCSTSGGS 87 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~--~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~ 87 (98)
+...+.++|+|.+++.+ |+|.|.|.+..... .........|.|... +..|.+..... ....++|.|.+.++.
T Consensus 66 ~~~~~~~sL~I~~v~~~-Dsg~Y~C~~~~~~~-~~~fg~gt~L~V~~~~~~~~P~V~~~~~----~~~~vtL~C~~~gf~ 139 (215)
T 1oga_D 66 GDARKDSSLHITAAQPG-DTGLYLCAGAGSQG-NLIFGKGTKLSVKPNIQNPDPAVYQLRD----SKSSDKSVCLFTDFD 139 (215)
T ss_dssp CTTSSEEEEEESSCCGG-GCEEEEEEEECTTS-SEEECCCEEEEEECCCSSCCCEEEEEEB----SSSSSCEEEEEESCC
T ss_pred cCCCCEEEEEEccCCcc-cCceEEEEEecccc-cceeCCCEEEEEeccCCCcCCEEEEcCC----CCCCeEEEEEccccc
Confidence 45677899999999999 99999999985311 122223356777643 23455521111 123679999998878
Q ss_pred CCCeE
Q psy5866 88 PDPQI 92 (98)
Q Consensus 88 p~~~~ 92 (98)
|.+.+
T Consensus 140 P~p~v 144 (215)
T 1oga_D 140 SQTNV 144 (215)
T ss_dssp TTCCC
T ss_pred cCccc
Confidence 87744
No 251
>2ak4_D SB27 T cell receptor alpha chain; bulged epitopes, PMHC/TCR complex, immune system; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kxf_D 3nfj_I 3ffc_D
Probab=98.73 E-value=6.1e-08 Score=58.72 Aligned_cols=78 Identities=10% Similarity=0.199 Sum_probs=50.7
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECC-CCCeeeEeeEEEEEECC--CCCCEEeCCCCceecCCCcEEEEEEcCCC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAG-SGQDLHSQVYTVTVLTP--PQPPKISPGANPVATEGRAIELVCSTSGG 86 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~-~~~~~~~~~~~l~v~~~--~~~p~i~~~~~~~~~~g~~~~l~C~~~~~ 86 (98)
+...+.++|+|.+++.+ |+|.|.|.+.... ...........|.|... +..|.|..... ....++|.|.+.+.
T Consensus 71 ~~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~~----~~~~vtL~Cl~~gf 145 (211)
T 2ak4_D 71 QKSTSSFNFTITASQVV-DSAVYFCALSGFYNTDKLIFGTGTRLQVFPNIQNPDPAVYQLRD----SKSSDKSVCLFTDF 145 (211)
T ss_dssp ETTTTEEEEEESSCCGG-GCEEEEEEEECSBTTSCCEECCCEEEEEECCCSSCCCEEEEEBC----CSSSCCEEEEEESC
T ss_pred cCCCCEEEEEECccccc-cCceEEEEEEcCCCcceeeECCCEEEEEeCcCCCCCCEEEEccC----CCCceEEEEEeeee
Confidence 46678899999999999 9999999998631 00112223346777643 34455522111 12367999999887
Q ss_pred CCCCeE
Q psy5866 87 SPDPQI 92 (98)
Q Consensus 87 ~p~~~~ 92 (98)
.|.+.+
T Consensus 146 ~P~~~v 151 (211)
T 2ak4_D 146 DSQTNV 151 (211)
T ss_dssp CTTCCC
T ss_pred cCCccc
Confidence 887754
No 252
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=98.73 E-value=2.9e-08 Score=56.48 Aligned_cols=47 Identities=30% Similarity=0.498 Sum_probs=35.8
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEE
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKI 63 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i 63 (98)
..+.++|+|.+++.+ |+|.|+|.+.+. ...+..+.|.|..+|.+|.|
T Consensus 99 ~~~~~~L~I~~v~~~-DsG~Y~C~~~n~----~~~~~~~~L~V~~~P~~P~i 145 (145)
T 1z9m_A 99 TPHELSISISNVALA-DEGEYTCSIFTM----PVRTAKSLVTVLGIPQKPII 145 (145)
T ss_dssp CSSEEEEEECSCCGG-GCEEEEEEECSS----SCEEEEEEEEEECCCC----
T ss_pred CCCeEEEEECCCChh-hCEEEEEEEEcC----CCceEEEEEEEEeCCCCCcC
Confidence 445789999999999 999999999884 34566778899888877653
No 253
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.72 E-value=5.4e-10 Score=70.02 Aligned_cols=79 Identities=14% Similarity=0.139 Sum_probs=46.8
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEc---------
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCST--------- 83 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~--------- 83 (98)
.+..+|.|.+++.+ |+|.|+|.+.+. .......+.|.|..++ ..+.......+.+|+.+.|.|.+
T Consensus 58 ~~~~~L~i~~~~~~-d~G~Y~C~~~n~---~g~~~~~~~l~v~~~~--~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~ 131 (317)
T 2y25_A 58 DGICTLLITEFSKK-DAGIYEVILKDD---RGKDKSRLKLVDEAFK--ELMMEVCKKIALSATDLKIQSTAEGIQLYSFV 131 (317)
T ss_dssp -CCEEEEETTCCST-TCSCEEEEEESS---SCEEEEEECCSTHHHH--HHHHHHHHHHHTCBCCCEEEECSSEEEEEEEB
T ss_pred CCeEEEEEccCCcc-cCeEEEEEEECC---CCcEEEEEEEEEecCc--cccccCCceecccCCCeEEEeeccccEEEEEe
Confidence 45578999999999 999999999875 2233333333222111 11110012334455666666654
Q ss_pred CCCCCCCeEEEEec
Q psy5866 84 SGGSPDPQISVTLQ 97 (98)
Q Consensus 84 ~~~~p~~~~~W~~~ 97 (98)
..+.|.+.+.|+++
T Consensus 132 ~~~~p~~~i~W~~~ 145 (317)
T 2y25_A 132 TYYVEDLKVNWSHN 145 (317)
T ss_dssp SSCCSSCEEEEEES
T ss_pred ccCCCCcEEEEEEC
Confidence 33378999999975
No 254
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.71 E-value=4.8e-08 Score=54.25 Aligned_cols=47 Identities=15% Similarity=0.338 Sum_probs=34.4
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEE
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKI 63 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i 63 (98)
..+.++|+|.+++.+ |+|.|+|.+.+. ......+.|.|..+|..+..
T Consensus 62 ~~~~~~L~I~~v~~~-DsG~Y~C~a~n~----g~~~~~~~l~V~~~P~~~~~ 108 (124)
T 3rbg_A 62 SANQLSITVPNVTLQ-DEGVYKCLHYSD----SVSTKEVKVIVLATMKGEFC 108 (124)
T ss_dssp ETTEEEEEESSCCGG-GCEEEEEEEESS----SEEEEEEEEEEECC------
T ss_pred CCCEEEEEECCCChH-HCEEEEEEEEcC----CCCcEEEEEEEEeCCCCCcc
Confidence 345689999999999 999999999984 45666788889887765543
No 255
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=98.70 E-value=6.5e-08 Score=51.96 Aligned_cols=48 Identities=29% Similarity=0.503 Sum_probs=35.1
Q ss_pred EEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC
Q psy5866 7 IDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP 58 (98)
Q Consensus 7 ~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~ 58 (98)
+.+....+.++|.|.+++.+ |+|.|+|.+.+. ....+..+.|.|..+|
T Consensus 60 ~~~~~~~~~~~L~i~~~~~~-D~G~Y~C~a~n~---~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 60 LSFPADGAEHGLLLTAALPT-DAGVYVCRARNA---AGEAYAAAAVTVLEPP 107 (107)
T ss_dssp EECCEETTEEEEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEEC--
T ss_pred EEEEeCCCEEEEEEccCCHH-hCEEEEEEEEcC---CCcEEEEEEEEEEcCC
Confidence 33333445668999999999 999999999985 4556667788876543
No 256
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.70 E-value=8.6e-08 Score=51.53 Aligned_cols=46 Identities=15% Similarity=0.163 Sum_probs=36.3
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
++.+....+..+|.|.+++.+ |+|.|+|.+.|. .+..+..+.|.|.
T Consensus 53 ~~~~~~~~~~~~L~I~~~~~~-D~G~Y~C~a~N~---~G~~~~~~~l~V~ 98 (100)
T 3knb_A 53 RFHIENTDDLTTLIIMDVQKQ-DGGLYTLSLGNE---FGSDSATVNIHIR 98 (100)
T ss_dssp TEEEEECSSEEEEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEE
T ss_pred eeeeecccceEEEEEcCCCcc-CCEEEEEEEEEC---CCEEEEEEEEEEE
Confidence 455555667788999999999 999999999995 4556666777764
No 257
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.70 E-value=3.1e-08 Score=64.06 Aligned_cols=59 Identities=19% Similarity=0.252 Sum_probs=30.6
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCCeEE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDPQIS 93 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~ 93 (98)
+|.|.+++.+ |+|.|+|.|.+. .+..+..+.+.|...+ .+|..+.+.|.+. |.|.|.+.
T Consensus 302 ~L~I~~v~~~-D~G~Y~C~a~N~---~g~~~~~~~l~V~~~~-------------~~g~~~~l~C~~~-g~P~P~i~ 360 (361)
T 2xot_A 302 DLFFKKVQVE-DGGVYTCYAMGE---TFNETLSVELKVYNFT-------------LHGHHDTLNAAAD-PWSHPQFE 360 (361)
T ss_dssp EEEESSCCTT-SCEEEEEEEECS---SCEEEEEEEEEEESSC-------------CC--------------------
T ss_pred eEEEeecCcc-cCEEEEEEEecC---CCccEEEEEEEEEeee-------------ccCCceEEEEEeC-CCCCCccc
Confidence 6999999999 999999999985 4555666677774211 4677899999986 78888764
No 258
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=98.69 E-value=7.5e-08 Score=58.35 Aligned_cols=78 Identities=15% Similarity=0.250 Sum_probs=50.0
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECC--CCCeeeEeeEEEEEECC--CCCCEEeCCCCceecCCCcEEEEEEcCC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAG--SGQDLHSQVYTVTVLTP--PQPPKISPGANPVATEGRAIELVCSTSG 85 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~--~~~~~~~~~~~l~v~~~--~~~p~i~~~~~~~~~~g~~~~l~C~~~~ 85 (98)
+...+.++|+|++++.+ |+|.|.|.+.+.. ...........|.|... +..|.+...... ...++|.|.+.+
T Consensus 69 ~~~~~~~sL~I~~~~~~-Dsg~Y~C~~~~~~~~~~~~~fg~gt~L~V~~~~~~~~P~V~~~~~~----~~~~tl~Cl~~g 143 (210)
T 2eys_A 69 DADTKQSSLHITASQLS-DSASYICVVSDRGSTLGRLYFGRGTQLTVWPDIQNPDPAVYQLRDS----KSSDKSVCLFTD 143 (210)
T ss_dssp ETTTTEEEEEESSCCGG-GCEEEEEEEESCSSTTCCEEECCCEEEEEECCCSSCCCEEEEECCC----SSSSCEEEEEES
T ss_pred cCCCCEEEEEEccCCcc-cCceEEEEEEccCCCcccceECCCEEEEEECCCCCCCCeEEecCCC----CCCceEEEEccc
Confidence 45677899999999999 9999999998631 11112223356777643 345655221111 126789999987
Q ss_pred CCCCCeE
Q psy5866 86 GSPDPQI 92 (98)
Q Consensus 86 ~~p~~~~ 92 (98)
..|.+.+
T Consensus 144 f~P~~~v 150 (210)
T 2eys_A 144 FDSQTNV 150 (210)
T ss_dssp CCTTCCC
T ss_pred ccCCcEe
Confidence 7776543
No 259
>3gsn_A RA14 TCR alpha chain (TRAV24, TRAJ49); HLA, human cytomegalovirus, PP65, T cell receptor (TCR), immune response, public response; 2.80A {Homo sapiens}
Probab=98.68 E-value=1.1e-08 Score=61.68 Aligned_cols=80 Identities=16% Similarity=0.194 Sum_probs=53.0
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC--CCCCEEeCCCCceecCCCcEEEEEEcCCCCC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP--PQPPKISPGANPVATEGRAIELVCSTSGGSP 88 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~--~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p 88 (98)
...+.++|+|.+++.+ |+|.|.|.+... ..........|.|... +..|.+....... ..++|.|.+.+..|
T Consensus 67 ~~~~~~sL~I~~l~~~-DsG~Y~Ca~~~~--~~~~fG~GT~L~V~~~~~~~~P~V~~~~~~~----~~~tl~Cl~~gf~P 139 (199)
T 3gsn_A 67 TKEGYSYLYIKGSQPE-DSATYLCARNTG--NQFYFGTGTSLTVIPNIQNPDPAVYQLRDSK----SSDKSVCLFTDFDS 139 (199)
T ss_dssp TTTTEEEEEBSSCCGG-GCEEEEEEEESS--SCEEECSCEEEEEECCCSSCCCEEEECCCSS----SSSSCCEEEETCCT
T ss_pred CCCCEEEEEEccCccc-CCccEEEEEccc--ccccCCCCEEEEEecccCCCCCEEEEcccCC----CCceEEEEeecccC
Confidence 5667899999999999 999999998642 1222233356777652 4456653211111 22578899998888
Q ss_pred CCeEEEEec
Q psy5866 89 DPQISVTLQ 97 (98)
Q Consensus 89 ~~~~~W~~~ 97 (98)
..++.|+++
T Consensus 140 ~i~~~~~~~ 148 (199)
T 3gsn_A 140 QTNVSQSKD 148 (199)
T ss_dssp TCCSSCSSC
T ss_pred CeEeEeccC
Confidence 557888654
No 260
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=98.68 E-value=1e-08 Score=64.89 Aligned_cols=78 Identities=9% Similarity=0.100 Sum_probs=47.3
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCCC-eEEEE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPDP-QISVT 95 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~W~ 95 (98)
.|.|.....+ |.|.|+|.+.+.............+.+. ...+|.+.... ..+.+|+.+.|.|.+.+..|++ .+.|+
T Consensus 181 ~L~i~~~~~d-~~g~Y~C~a~n~~~~~~~~~~~~~~~~~-v~~~P~i~~~~-~~~~~G~~v~l~C~~~g~~p~~~~v~W~ 257 (327)
T 2wng_A 181 TAKVVLTRED-VHSQVICEVAHVTLQGDPLRGTANLSET-IRVPPTLEVTQ-QPVRAENQVNVTCQVRKFYPQRLQLTWL 257 (327)
T ss_dssp EEEEECCTTG-GGCEEEEEEECTTSCSCCEEEEEEGGGT-BCBCCEEEEEE-ECCSSTTCCEEEEEEEEEBSSCEEEEEE
T ss_pred EEEEechhcC-cCceEEEEEeccccCCCcccceEEeccc-cCCCCEEEEec-CCcCCCCcEEEEEEEccccCCCcEEEEE
Confidence 3667766666 7899999999864321122223333221 12334442111 1277999999999997435555 89999
Q ss_pred ec
Q psy5866 96 LQ 97 (98)
Q Consensus 96 ~~ 97 (98)
++
T Consensus 258 k~ 259 (327)
T 2wng_A 258 EN 259 (327)
T ss_dssp ET
T ss_pred EC
Confidence 75
No 261
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.68 E-value=8.9e-08 Score=52.22 Aligned_cols=44 Identities=11% Similarity=0.108 Sum_probs=34.4
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP 57 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~ 57 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+. .......+.|.|..+
T Consensus 68 ~~~~~~~sL~I~~~~~~-DsG~Y~C~v~~~---~~~~~~~v~L~V~~~ 111 (113)
T 1zox_A 68 NQRDFIFTVTMEDLRMS-DAGIYWCGITKG---GLDPMFKVTVNIGPV 111 (113)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEECCS---SSCCEEEEEEEEECC
T ss_pred CCcCCEEEEEEccCCHH-HCEEEEEeeEcC---CCCccEEEEEEEEcC
Confidence 35677899999999999 999999999874 234455677777643
No 262
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.67 E-value=6.2e-08 Score=63.03 Aligned_cols=80 Identities=16% Similarity=0.248 Sum_probs=50.1
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEe-CCCCceecCCCcEEEEEEcCCCCC-CCeE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKIS-PGANPVATEGRAIELVCSTSGGSP-DPQI 92 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~-~~~~~~~~~g~~~~l~C~~~~~~p-~~~~ 92 (98)
..+|+|.+++.+ |+|.|+|++.+..... .....+.+. .....+|.+. ........+|+.+.|.|.+.+.+| .+.+
T Consensus 232 ~s~L~I~~~~~~-D~g~Y~C~~~~~~~~~-~~~~~v~~~-~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v 308 (376)
T 2aty_A 232 VSELPIMHQDWL-NGKEFKCRVNSAAFPA-PIEKTISKT-KGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITV 308 (376)
T ss_pred EEEEEechHhcc-CCCEEEEEEecCCCCC-ceEEEEcCC-CCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEE
Confidence 346999999999 9999999998853211 111112110 1122334431 113334456889999999986566 5689
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 309 ~W~k~ 313 (376)
T 2aty_A 309 EWQWN 313 (376)
T ss_pred EEEEC
Confidence 99985
No 263
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=98.67 E-value=5.3e-07 Score=53.83 Aligned_cols=63 Identities=14% Similarity=0.207 Sum_probs=47.4
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEc
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCST 83 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~ 83 (98)
.+...|.|.++... |+|.|+|.+.|. .+..+..+.|.|..+|.+|.... . ...+..+.+.|..
T Consensus 73 ~~~~~L~i~~~~~~-d~G~Y~C~a~n~---~g~~~~~~~l~v~~~P~~p~~~~---~-~~~~~~~~l~w~~ 135 (215)
T 3mtr_A 73 PSASYLEVTPDSEN-DFGNYNCTAVNR---IGQESLEFILVQADTPSSPSIDQ---V-EPYSSTAQVQFDE 135 (215)
T ss_dssp TTEEEEEECCCSGG-GCEEEEEEEECS---SCEEEEEEEEEECCCCCCCEEEE---E-EEETTEEEEEEEC
T ss_pred CCeeEEEEecCChh-hCeEEEEEEEEC---CCceEEEEEEEECCCCCCCcceE---E-EEecceEEEEEec
Confidence 45678999999999 999999999985 44556678888887887776531 1 2345668888874
No 264
>1kgc_D T-cell receptor alpha chain; LC13 clone, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1mi5_D 3kpr_D 3kps_D 3o6f_C 3t0e_C 3pqy_D 2esv_D 3dxa_D 3dx9_A
Probab=98.65 E-value=9.7e-08 Score=57.61 Aligned_cols=78 Identities=21% Similarity=0.250 Sum_probs=49.9
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECC---CCCeeeEeeEEEEEECC--CCCCEEeCCCCceecCCCcEEEEEEcC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAG---SGQDLHSQVYTVTVLTP--PQPPKISPGANPVATEGRAIELVCSTS 84 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~---~~~~~~~~~~~l~v~~~--~~~p~i~~~~~~~~~~g~~~~l~C~~~ 84 (98)
+...+.++|+|.+++.+ |+|.|.|.+.... ...........|.|... +..|.+...... ...++|.|.+.
T Consensus 64 ~~~~~~~sL~I~~~~~~-Dsg~Y~C~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~~~----~~~v~L~C~~~ 138 (206)
T 1kgc_D 64 AEDRKSSTLILHRATLR-DAAVYYCILPLAGGTSYGKLTFGQGTILTVHPNIQNPDPAVYQLRDS----KSSDKSVCLFT 138 (206)
T ss_dssp CTTSSEEEEEESSCCGG-GCEEEEEECCCCSTTCCCCCCCCCCEEEEEECCCSSCCCEEEECCCC----TTCCCEEEEEE
T ss_pred cCCCCEEEEEECCCCcc-cCccEEEEEecccCCCcccceECCCEEEEEeCCCCCCCCeEEeecCC----CCCeEEEEEee
Confidence 46677899999999999 9999999987521 00111112346777643 234555321111 13679999998
Q ss_pred CCCCCCeE
Q psy5866 85 GGSPDPQI 92 (98)
Q Consensus 85 ~~~p~~~~ 92 (98)
+..|.+.+
T Consensus 139 g~~P~~~V 146 (206)
T 1kgc_D 139 DFDSQTNV 146 (206)
T ss_dssp SCCTTCCC
T ss_pred ceeccccc
Confidence 88887744
No 265
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.65 E-value=5e-08 Score=54.54 Aligned_cols=38 Identities=16% Similarity=0.350 Sum_probs=31.7
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTV 54 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v 54 (98)
.++++|+|.+++.+ |+|.|+|.+.+. ....+..+.|.|
T Consensus 81 ~g~~sL~I~~v~~~-D~G~Y~C~v~~~---~g~~~~~v~LkV 118 (125)
T 4gos_A 81 VGNASLRLKNVQLT-DAGTYKCYIITS---KGKGNANLEYKT 118 (125)
T ss_dssp GTBCCEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEE
T ss_pred CCeEEEEECCCChH-HCEEEEEEEEeC---CCeEEEEEEEEE
Confidence 45789999999999 999999999984 566666677766
No 266
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=98.64 E-value=3.1e-07 Score=51.27 Aligned_cols=48 Identities=10% Similarity=0.211 Sum_probs=36.0
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p 61 (98)
+...+.++|+|.+++.+ |+|.|.|.+... .......+.|.|..+|.+|
T Consensus 69 ~~~~~~~sL~I~~l~~~-Dsg~Y~C~~~~~---~~~~~~~v~L~V~~~~~~~ 116 (124)
T 2nms_A 69 NQKNRTFTVTMEDLMKT-DADTYWCGIEKT---GNDLGVTVQVTIDPAPVTQ 116 (124)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEECCC---
T ss_pred cCcCCEEEEEEeCCCHH-HCEEEEEEEEcC---CCCccEEEEEEEeCCCcCC
Confidence 45678899999999999 999999999874 3344556788887665544
No 267
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=98.63 E-value=3.9e-08 Score=54.32 Aligned_cols=43 Identities=14% Similarity=0.235 Sum_probs=32.2
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCC
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQP 60 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~ 60 (98)
+++|+|.+++.+ |+|.|+|.+.+.. ....+..+.|.|++||.+
T Consensus 70 ~~sL~I~~v~~~-D~G~Y~C~v~~~~--~g~~~~~~~L~V~~pp~~ 112 (117)
T 3q0h_A 70 GLGLTLQSLTVN-DTGEYFCIYHTYP--DGTYTGRIFLEVLESSVA 112 (117)
T ss_dssp TTCEEECSCCGG-GCEEEEEEEEEET--TCCEEEEEEEEEECC---
T ss_pred ceEEEEeeCChh-hCEEEEEEEEECC--CCCeEEEEEEEEEccCcc
Confidence 457999999999 9999999987632 245566788999877654
No 268
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.62 E-value=2.7e-07 Score=50.67 Aligned_cols=44 Identities=18% Similarity=0.310 Sum_probs=36.0
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQP 60 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~ 60 (98)
.+.++|.|.+++.+ |+|.|+|.+.|. .+..+..+.|.|..+|.+
T Consensus 70 ~~~~~L~I~~v~~~-D~G~Y~C~a~N~---~G~~~~~~~l~V~~~p~~ 113 (116)
T 2kkq_A 70 TGRVTLLIKDVNKK-DAGWYTVSAVNE---AGVTTCNTRLDVTARPNQ 113 (116)
T ss_dssp TCEEEEEEEEECGG-GCEEEEEEEEET---TEEEEEEEEEEEECCSCC
T ss_pred CCeEEEEECCCCcc-cCEEEEEEEEcC---CCeEEEEEEEEEeCCCCC
Confidence 35668999999999 999999999995 456667788888876654
No 269
>1lp9_E T-cell receptor alpha chain; immunoregulatory complex, class I MHC:TCR CO-crystal, immune; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 2j8u_E 2jcc_E 2uwe_E 1nfd_A*
Probab=98.62 E-value=4.9e-08 Score=58.41 Aligned_cols=77 Identities=16% Similarity=0.196 Sum_probs=48.8
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECC--CCCeeeEeeEEEEEECC--CCCCEEeCCCCceecCCCcEEEEEEcCCC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAG--SGQDLHSQVYTVTVLTP--PQPPKISPGANPVATEGRAIELVCSTSGG 86 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~--~~~~~~~~~~~l~v~~~--~~~p~i~~~~~~~~~~g~~~~l~C~~~~~ 86 (98)
...+.++|+|.+++.+ |+|.|.|.+.... ...........|.|... +..|.+..... ....++|.|.+.+.
T Consensus 68 ~~~~~~sL~I~~~~~~-Dsg~Y~C~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~~----~~~~~tL~Cl~~gf 142 (194)
T 1lp9_E 68 KSSSSFHLQKSSAQLS-DSALYYCALFLASSSFSKLVFGQGTSLSVVPNIQNPEPAVYQLKD----PRSQDSTLCLFTDF 142 (194)
T ss_dssp GGGTBCCEEESSCCGG-GCEEEEEEEEECSSSSCEEEECCCEEEEEECCCSSCCCEEEEEEC----TTSSSCEEEEEESC
T ss_pred CCCCEEEEEEcccCcc-cCeeEEEEEecccCCcceeeeccCceEEecCcCCCCCCeeEecCC----CCCCcEEEEEeecc
Confidence 3456788999999999 9999999998621 01112223457777643 23455521111 11257999999877
Q ss_pred CCCCeE
Q psy5866 87 SPDPQI 92 (98)
Q Consensus 87 ~p~~~~ 92 (98)
.|.+.+
T Consensus 143 ~P~~~V 148 (194)
T 1lp9_E 143 DSQINV 148 (194)
T ss_dssp CTTSCC
T ss_pred cCCccc
Confidence 887755
No 270
>4ei6_A Valpha1 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_C 4elk_A 4elm_E* 3qeu_A 1ao7_D 3qdj_D 3qdg_D 3qfj_D 1qsf_D 1qse_D* 3d39_D* 3d3v_D* 3h9s_D 3pwp_D 2gj6_D 3utp_D* 3uts_D 1qrn_D 3hg1_D 3rdt_A ...
Probab=98.62 E-value=5.6e-08 Score=59.07 Aligned_cols=83 Identities=13% Similarity=0.111 Sum_probs=52.1
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECCC--CCeeeEeeEEEEEECC--CCCCEEeCCCCceecCCCcEEEEEEcCC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAGS--GQDLHSQVYTVTVLTP--PQPPKISPGANPVATEGRAIELVCSTSG 85 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~--~~~~~~~~~~l~v~~~--~~~p~i~~~~~~~~~~g~~~~l~C~~~~ 85 (98)
+...+.++|+|.+++.+ |+|.|.|.+..... ..........|.|... +..|.+...... + ..++|.|.+.+
T Consensus 67 ~~~~~~~sL~I~~lq~~-DsG~Y~Ca~~~~~~~~~~~~fG~GT~L~V~~~~~~~~PsVf~l~~~---~-~~~tl~Cl~~~ 141 (208)
T 4ei6_A 67 NKASLHVSLHIRDSQPS-DSALYFCAASEQNNYAQGLTFGLGTRVSVFPYIQNPDPAVYQLRDS---K-SSDKSVCLFTD 141 (208)
T ss_dssp BTTTTBC-CEECSCCGG-GCEEEEEEEEECCSSCCCCEECCCEEEEEECCCSSCCCEEEEEEBS---S-CTTCEEEEEES
T ss_pred cCCCCEEEEEEEeCccc-CCCcEEEEEecCCCccccccCCCCEEEEEeCcccCCCCEEEEcccC---C-CCceEEEEeec
Confidence 45677899999999999 99999999875210 0112223346777642 344555211111 1 12578999998
Q ss_pred CCCCCeEEEEec
Q psy5866 86 GSPDPQISVTLQ 97 (98)
Q Consensus 86 ~~p~~~~~W~~~ 97 (98)
..|..++.|.++
T Consensus 142 f~P~i~v~~~~~ 153 (208)
T 4ei6_A 142 FDSQTNVSQSKD 153 (208)
T ss_dssp CCTTCCCCCCSS
T ss_pred cCCceEeeeccc
Confidence 888567888754
No 271
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.60 E-value=4.9e-08 Score=54.25 Aligned_cols=48 Identities=25% Similarity=0.261 Sum_probs=38.4
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEe
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKIS 64 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~ 64 (98)
++.+|+|.+++.+ |+|.|+|.+.+.. .......+.|.|+.++..|.|.
T Consensus 71 ~~~sL~I~nv~~~-DsG~Y~c~v~~~~--~~~~~~~~~L~V~~~~~~P~I~ 118 (121)
T 2edo_A 71 QSGALYISKVQKE-DNSTYIMRVLKKT--GNEQEWKIKLQVLDPVPKPVIK 118 (121)
T ss_dssp TTCCEEESSCCGG-GCSEEEEEEEETT--TEEEECCEECEEECCSCCCCCC
T ss_pred CCceEEEeCCCHH-HCeEEEEEEEcCC--CcEEEEEEEEEEECCCCCCEEE
Confidence 3457999999999 9999999998742 2456667899999888877763
No 272
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.60 E-value=1.2e-07 Score=51.21 Aligned_cols=46 Identities=22% Similarity=0.333 Sum_probs=36.9
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p 61 (98)
..+..+|+|.+++.+ |+|.|+|.+.|. ....+..+.|.|..+|.+|
T Consensus 62 ~~~~~~L~i~~v~~~-D~G~Y~C~a~n~---~g~~~~~~~l~V~~~p~~P 107 (110)
T 2dm3_A 62 ENGVHSLIIEPVTSR-DAGIYTCIATNR---AGQNSFSLELVVAAKESGP 107 (110)
T ss_dssp TTSCEEEEESSCCGG-GCSBBCEEEECS---SCEEEECCEEEEECCCCSS
T ss_pred cCCeEEEEEeeCCcc-cCEEEEEEEECC---CCEEEEEEEEEEeCCCCCC
Confidence 345678999999999 999999999985 3456677888888776654
No 273
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=98.60 E-value=3.1e-07 Score=48.99 Aligned_cols=47 Identities=23% Similarity=0.268 Sum_probs=35.7
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT 56 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~ 56 (98)
++......+..+|.|.+++.+ |+|.|+|.+.|. .+..+..+.|.|..
T Consensus 54 ~~~~~~~~~~~~L~i~~~~~~-D~G~Y~C~a~N~---~G~~~~~~~l~V~~ 100 (103)
T 3qp3_A 54 KIHYTNTSGVLTLEILDCHTD-DSGTYRAVCTNY---KGEASDYATLDVTG 100 (103)
T ss_dssp SEEEEEETTEEEEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEEC
T ss_pred CEEEEECCCEEEEEEcCCCcc-cCEEEEEEEEeC---CCcEEEEEEEEEEC
Confidence 344444456678999999999 999999999995 45566667777753
No 274
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.59 E-value=4.2e-08 Score=58.62 Aligned_cols=75 Identities=11% Similarity=0.263 Sum_probs=41.9
Q ss_pred EEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEE--eCCCCceecCCCcEEEEEEcCCCCCC-CeEEEE
Q psy5866 19 IISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKI--SPGANPVATEGRAIELVCSTSGGSPD-PQISVT 95 (98)
Q Consensus 19 ~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i--~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~W~ 95 (98)
.|....++ |+|.|+|.+.+..... .....+.+ +.....+|.+ .. .......|..+.|.|.+.+.+|+ +.+.|+
T Consensus 71 ~i~~~d~~-d~g~Y~C~a~n~~~~~-~~~~~v~~-~~~~~~~P~v~~~~-~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~ 146 (207)
T 1l6x_A 71 TVLHQDWL-NGKEYKCKVSNKALPA-PIEKTISK-AKGQPREPQVYTLP-PSRDELTKNQVSLTCLVKGFYPSDIAVEWE 146 (207)
T ss_dssp ECCHHHHH-TTCCEEEEEECTTSSS-CEEEEECC-CCSCCBCCEEEEEC-CCGGGGGSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEHHHcc-CCceEEEEEEcCcCCc-ceEEEecc-CCCCCcCCEEEEEC-CChHHhcCCcEEEEEEEeCeECCCeEEEEE
Confidence 34455555 6999999999853311 11221211 0012233443 22 22222345669999999755665 489999
Q ss_pred ec
Q psy5866 96 LQ 97 (98)
Q Consensus 96 ~~ 97 (98)
++
T Consensus 147 k~ 148 (207)
T 1l6x_A 147 SN 148 (207)
T ss_dssp ET
T ss_pred EC
Confidence 75
No 275
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.59 E-value=1.3e-07 Score=51.42 Aligned_cols=41 Identities=24% Similarity=0.314 Sum_probs=32.2
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP 58 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~ 58 (98)
+++|+|.+++.+ |+|.|+|.+.+.. .......+.|.|+++|
T Consensus 78 ~~sL~I~~v~~~-D~G~Y~C~v~~~~--~~~~~~~~~L~V~~~P 118 (118)
T 3udw_C 78 NASLRMFGLRVE-DEGNYTCLFVTFP--QGSRSVDIWLRVLAKP 118 (118)
T ss_dssp BCCEEECSCCGG-GCEEEEEEEEEET--TEEEEEEEEEEEEC--
T ss_pred CcEEEEeecChH-HCeEEEEEEEECC--CCCccceEEEEEEeCC
Confidence 778999999999 9999999998731 3466667788887654
No 276
>2q86_A Valpha14 TCR; INKT cells, TCR, glycolipid recognition, innate immunity, IM system; HET: NAG BMA MAN FUC; 1.85A {Mus musculus} PDB: 3quy_C* 3o9w_C* 3qux_C* 3o8x_C* 3quz_C* 3rtq_C* 3rzc_C* 3ta3_C* 3tvm_C* 3qi9_C* 3ard_C* 3are_C* 3arf_C* 3arg_C* 3he6_C* 3he7_C* 3arb_C* 3scm_C* 3sda_C* 3sdc_C* ...
Probab=98.58 E-value=2.6e-08 Score=61.14 Aligned_cols=77 Identities=13% Similarity=0.198 Sum_probs=49.6
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC--CCCCEEeCCCCceecCCCcEEEEEEcCCCC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP--PQPPKISPGANPVATEGRAIELVCSTSGGS 87 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~--~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~ 87 (98)
+...+.++|+|.+++.+ |+|.|.|.+.... .........|.|... +..|.+..... ....++|.|.+.+..
T Consensus 67 ~~~~~~~sL~I~~~~~~-Dsg~Y~C~~~~~~--~~~~g~gt~L~V~~~~~~~~P~V~~~~~----~~~~~tL~Cl~~gf~ 139 (229)
T 2q86_A 67 DKDAKHSTLHITATLLD-DTATYFCVVGDRG--SALFGSGTQLIVIPYIQNPEPAVYQLKD----PRSQDSTLCLFTDFD 139 (229)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEESCGG--GCEECCCEEEEEECCCSSCCCEEEEEEC----TTSTTCEEEEEEEEC
T ss_pred cCCCCEEEEEEcccCcc-cCccEEEEEEecC--cccccCCEEEEEECcCCCCCCEEEEccC----CCCCeEEEEEECCcC
Confidence 45677899999999999 9999999987521 111222346777643 34455522111 112678999987667
Q ss_pred CCCeEE
Q psy5866 88 PDPQIS 93 (98)
Q Consensus 88 p~~~~~ 93 (98)
|.+.+.
T Consensus 140 P~p~V~ 145 (229)
T 2q86_A 140 SQINVP 145 (229)
T ss_dssp TTCCCC
T ss_pred cCCccc
Confidence 776553
No 277
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=98.58 E-value=3.2e-07 Score=48.45 Aligned_cols=46 Identities=22% Similarity=0.344 Sum_probs=34.6
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
++.+....+..+|.|.+++.+ |+|.|+|.+.+. ....+..+.|.|.
T Consensus 52 ~~~~~~~~~~~~L~i~~~~~~-d~G~Y~C~a~n~---~g~~~~~~~l~V~ 97 (99)
T 3puc_A 52 KYKLSEDKGGFFLEIHKTDTS-DSGLYTCTVKNS---AGSVSSSCKLTIK 97 (99)
T ss_dssp SEEEEEETTEEEEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEE
T ss_pred CEEEEEeCCEEEEEECCCCcc-cCEEEEEEEEeC---CCcEeEEEEEEEE
Confidence 344444456678999999999 999999999985 4555666666664
No 278
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=98.58 E-value=3.3e-07 Score=51.61 Aligned_cols=41 Identities=24% Similarity=0.472 Sum_probs=33.7
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP 57 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~ 57 (98)
.++++|+|.+++.+ |+|.|+|.+.+. .......+.|.|..|
T Consensus 82 ~~~~sL~I~~v~~~-D~G~Y~C~v~~~---~~~~~~~~~L~V~~P 122 (139)
T 1pko_A 82 EGKVALRIQNVRFS-DEGGYTCFFRDH---SYQEEAAVELKVEDP 122 (139)
T ss_dssp GTEEEEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEECT
T ss_pred CCeEEEEEccCCHH-HCEEEEEEEEcC---CCceEEEEEEEEecC
Confidence 45789999999999 999999999985 345666788888743
No 279
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.58 E-value=3.2e-07 Score=51.47 Aligned_cols=52 Identities=13% Similarity=0.164 Sum_probs=37.5
Q ss_pred EEEE--eCCCCeEEEEEccceeeccCeEEEEEEEECCCCC-eeeEeeEEEEEECCC
Q psy5866 6 IIDY--RPDSGRYDLIISNASFERDNGKFECRLKAAGSGQ-DLHSQVYTVTVLTPP 58 (98)
Q Consensus 6 ~~~~--~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~-~~~~~~~~l~v~~~~ 58 (98)
||.. +...+.++|+|.+++.+ |+|.|.|.+.+..... ...+..+.|.|...+
T Consensus 63 Rf~~~~~~~~~~~sL~I~~~~~~-Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~~~~ 117 (129)
T 3rrq_A 63 RFRVTQLPNGRDFHMSVVRARRN-DSGTYLCGAISLAPKLQIKESLRAELRVTERR 117 (129)
T ss_dssp CEEEEECTTSSEEEEEESSCCGG-GCEEEEEEEEECGGGCEEEECCCEEEEEECCC
T ss_pred cEEEEEcCCCCEEEEEECCCChh-HCEEEEEEEEecCCCceeeEeceEEEEEecCc
Confidence 4444 35677899999999999 9999999998853211 223456788887544
No 280
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.58 E-value=1.6e-07 Score=50.32 Aligned_cols=41 Identities=24% Similarity=0.436 Sum_probs=32.8
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP 58 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~ 58 (98)
.+..+|.|.+++.+ |+|.|+|.+.+ ....+..+.|.|..+|
T Consensus 68 ~~~~~L~I~~v~~~-D~G~Y~C~~~n----~~~~~~~~~L~V~~~P 108 (108)
T 3m45_A 68 WHELSISVSDVSLS-DEGQYTCSLFT----MPVKTSKAYLTVLGVP 108 (108)
T ss_dssp SSEEEEEECSCCGG-GCEEEEEEECS----SSCEEEEEEEEEECCC
T ss_pred CCcEEEEECCCChh-HCeEEEEEEEc----CCCcEEEEEEEEEcCC
Confidence 36789999999999 99999999987 2345566778887554
No 281
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.57 E-value=1.2e-07 Score=51.83 Aligned_cols=40 Identities=25% Similarity=0.524 Sum_probs=32.6
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT 56 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~ 56 (98)
.+.++|+|.+++.+ |+|.|+|.+.+. .......+.|.|++
T Consensus 86 ~~~~sL~I~~v~~~-D~G~Y~C~v~~~---~~~~~~~~~L~V~~ 125 (126)
T 1eaj_A 86 SGDASINVTNLQLS-DIGTYQCKVKKA---PGVANKKIHLVVLV 125 (126)
T ss_dssp GTBCCEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEEC
T ss_pred CCeEEEEECcCChH-HCeEEEEEEEcC---CccCCcEEEEEEEc
Confidence 44578999999999 999999999984 45556677888764
No 282
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.55 E-value=9.7e-08 Score=51.10 Aligned_cols=48 Identities=23% Similarity=0.360 Sum_probs=35.8
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p 61 (98)
++.+........|.|.+++.+ |+|.|+|.+.+ .+..+.|.|..+|..|
T Consensus 53 ~~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~a~n-------~~~~~~l~V~~~p~~~ 100 (103)
T 2edf_A 53 KYDVVCEGTMAMLVIRGASLK-DAGEYTCEVEA-------SKSTASLHVEEKASGP 100 (103)
T ss_dssp SEEEEEETTEEEEEESSCCTT-TCSEEEEECSS-------CEEEEEEEECCCSSSS
T ss_pred CEEEEECCCEEEEEECCCCcc-cCEEEEEEEcc-------CCcEEEEEEeCCCCCC
Confidence 444444455678999999999 99999999976 2456788887666543
No 283
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=98.54 E-value=7.9e-07 Score=49.46 Aligned_cols=49 Identities=20% Similarity=0.408 Sum_probs=35.0
Q ss_pred eEEEE--eCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEE
Q psy5866 5 EIIDY--RPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTV 54 (98)
Q Consensus 5 ~~~~~--~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v 54 (98)
.|+.+ +...+.++|+|.+++.+ |+|.|.|.+.............+.|.|
T Consensus 71 ~R~~~~~~~~~~~~sL~I~~l~~~-Dsg~Y~C~v~~~~~~~~~~~~~l~L~V 121 (122)
T 1hkf_A 71 SRFTIWDDPDAGFFTVTMTDLREE-DSGHYWCRIYRPSDNSVSKSVRFYLVV 121 (122)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGG-GCEEEEEEEECTTTCCEEEEEEEEEEE
T ss_pred CcEEEEEcCcCCEEEEEEeCCCHH-HCEEEEEEEEcCCCCcccccEEEEEEe
Confidence 34444 66788999999999999 999999999875322334444445444
No 284
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.54 E-value=8.5e-08 Score=50.15 Aligned_cols=45 Identities=20% Similarity=0.325 Sum_probs=32.9
Q ss_pred ceeEEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 3 KVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 3 ~~~~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
.+.++......+...|.|.+++.+ |+|.|+|.+.+. +..+.|+|.
T Consensus 38 ~~~~~~~~~~~~~~~L~I~~~~~~-D~G~Y~C~a~n~-------~~~a~l~V~ 82 (84)
T 2lu7_A 38 SQGRVQLEQAGARQVLRVQGARSG-DAGEYLCDAPQD-------SRIFLVSVE 82 (84)
T ss_dssp CCSSEEEEECSSCEEEEESSCSST-TCEEEEEECTTT-------CEEEEEEEC
T ss_pred ccccEEEeecCCeEEEEecCCCCc-ccEEEEEEECCE-------EEEEEEEEE
Confidence 344555555667788999999999 999999987542 234566664
No 285
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=98.53 E-value=2.5e-06 Score=53.08 Aligned_cols=66 Identities=15% Similarity=0.227 Sum_probs=46.1
Q ss_pred CCCCeEEEEEcc-ceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEc
Q psy5866 11 PDSGRYDLIISN-ASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCST 83 (98)
Q Consensus 11 ~~~~~~~l~I~~-v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~ 83 (98)
...+..+|.|.+ +... |+|.|+|.+.|. .+.....+.|.|..+|.+|... ......+..+.|+|..
T Consensus 155 ~~~~~~~l~i~~~~~~~-d~G~Y~C~a~N~---~G~~~~~~~l~v~~~P~~p~~~---~~~~~~~~~v~l~w~~ 221 (305)
T 2nzi_A 155 VTRSFTSLVFPNGVERK-DAGFYVVCAKNR---FGIDQKTVELDVADVPDPPRGV---KVSDVSRDSVNLTWTE 221 (305)
T ss_dssp ECSSEEEEEETTCCCST-TCEEEEEEEEET---TEEEEEEEEEEEEBCCCCCEEE---EEESCCSSCEEEEEEC
T ss_pred EcCCceEEEEecCCccC-ccEEEEEEEEeC---CCceeeEEEEEEecCCCCCCCc---eeeeccCCEEEEEEcC
Confidence 334567899999 9999 999999999995 4566667888888777766531 1122234556666653
No 286
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.53 E-value=2.9e-07 Score=50.44 Aligned_cols=46 Identities=13% Similarity=0.208 Sum_probs=35.4
Q ss_pred EeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC
Q psy5866 9 YRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP 58 (98)
Q Consensus 9 ~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~ 58 (98)
+....+...|.|.++..+ |+|.|+|.+.|. ....+..+.|.|..+|
T Consensus 72 ~~~~~~~~~L~i~~~~~~-D~G~Y~C~a~N~---~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 72 VRTSDFDTVFFVRQAARS-DSGEYELSVQIE---NMKDTATIRIRVVEKA 117 (118)
T ss_dssp EEECSSEEEEEESSCCTT-TCEEEEEEEECS---SCEECCEEEEEEECCC
T ss_pred EEECCCeEEEEECCCChh-cCEEEEEEEEeC---CCeEEEEEEEEEEcCC
Confidence 334455677999999999 999999999986 3456666788887554
No 287
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.53 E-value=1e-07 Score=62.94 Aligned_cols=76 Identities=12% Similarity=0.131 Sum_probs=46.6
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC--------------CCCCEE-eCCCCc--eecCCCcEEE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP--------------PQPPKI-SPGANP--VATEGRAIEL 79 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~--------------~~~p~i-~~~~~~--~~~~g~~~~l 79 (98)
.|+|.++..+ | |.|+|.+.+... .......+.+... ...|.+ ...+.. .+.+|+.+.|
T Consensus 195 ~L~i~~~~~~-d-G~Y~C~a~n~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L 269 (457)
T 1hzh_H 195 VVTVPSSSLG-T-QTYICNVNHKPS---NTKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEV 269 (457)
T ss_dssp EEEECSGGGG-T-SCCEEEEEEGGG---TEEEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCE
T ss_pred EEEecccccC-C-ceEEEEEEeCCC---CcceeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEE
Confidence 6899999998 9 999999998522 2112222221110 012333 111222 2678999999
Q ss_pred EEEcCCCCCCC---eEEEEec
Q psy5866 80 VCSTSGGSPDP---QISVTLQ 97 (98)
Q Consensus 80 ~C~~~~~~p~~---~~~W~~~ 97 (98)
.|.+.+..|.| .+.|+++
T Consensus 270 ~C~~~g~~p~p~~~~i~W~k~ 290 (457)
T 1hzh_H 270 TCVVVDVSHEDPEVKFNWYVD 290 (457)
T ss_dssp EEEEECCCTTCCCCEEEEEET
T ss_pred EEEEEcccCCCCceEEEEEeC
Confidence 99997433443 8999975
No 288
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.53 E-value=1.3e-07 Score=51.15 Aligned_cols=45 Identities=18% Similarity=0.243 Sum_probs=35.6
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p 61 (98)
.+.+.|.|.+++.+ |+|.|+|.+.|. ....+..+.|.|..++..|
T Consensus 63 ~~~~~L~i~~v~~~-D~G~Y~C~a~N~---~g~~~~~~~l~V~~~~~~P 107 (110)
T 2dm2_A 63 DGTCSLHTTASTLD-DDGNYTIMAANP---QGRISCTGRLMVQAVNSGP 107 (110)
T ss_dssp TCEEEEEESSCCTT-TCSCCEEEEECT---TCCEEECCCEEEECCSCCS
T ss_pred CcEEEEEECCCChh-hCEEEEEEEEEC---CCeEEEEEEEEEECCCCCC
Confidence 55678999999999 999999999986 3445666778887766654
No 289
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=98.53 E-value=3.3e-07 Score=48.42 Aligned_cols=46 Identities=15% Similarity=0.217 Sum_probs=34.1
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
++.+....+..+|.|.+++.+ |+|.|+|.+.+. .......+.|.|.
T Consensus 48 ~~~~~~~~~~~~L~i~~v~~~-D~G~Y~C~a~n~---~g~~~~~~~l~V~ 93 (97)
T 2bk8_A 48 KYEITYEDGVAILYVKDITKL-DDGTYRCKVVND---YGEDSSYAELFVK 93 (97)
T ss_dssp SEEEEEETTEEEEEECSCCGG-GCEEEEEEEECS---SCEEEEEEEEEET
T ss_pred CEEEEEcCCeEEEEEecCChh-hCeEEEEEEECC---CCeEeEEEEEEEE
Confidence 444444566778999999999 999999999985 4455555666664
No 290
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.52 E-value=1.5e-07 Score=51.81 Aligned_cols=44 Identities=23% Similarity=0.307 Sum_probs=30.7
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP 58 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~ 58 (98)
.++++|+|.+++.+ |+|.|+|.+.+.... ......+.|.|..+|
T Consensus 78 ~~~~sL~I~~v~~~-D~G~Y~C~v~~~~~~-~~~~~~v~L~V~~~p 121 (124)
T 1neu_A 78 WKDGSIVIHNLDYS-DNGTFTCDVKNPPDI-VGKTSQVTLYVFEKV 121 (124)
T ss_dssp GTBCCEEECSCCGG-GCEEEEEEEEC-----CCEEEEEEEEEEC--
T ss_pred CCeEEEEEccCChh-hCEEEEEEEEcCCCC-cCcEeeEEEEEecCC
Confidence 45678999999999 999999999874221 124556788887543
No 291
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.52 E-value=8.9e-08 Score=51.33 Aligned_cols=44 Identities=36% Similarity=0.686 Sum_probs=33.7
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p 61 (98)
........|.|.+++.+ |+|.|+|.+.+. ...+.|.|..+|.+|
T Consensus 59 ~~~~~~~~L~I~~~~~~-D~G~Y~C~a~n~-------~~~~~l~V~~~P~pp 102 (104)
T 2e6p_A 59 KMDGRKHRLILPEAKVQ-DSGEFECRTEGV-------SAFFGVTVQDPSGPS 102 (104)
T ss_dssp EEETTEEEEEESSCCTT-TCEEEEEECSSC-------CCCEEEEEECCCCSS
T ss_pred EeCCCEEEEEECCCChh-hCEEEEEEECCc-------eEEEEEEEcCCCCCc
Confidence 33455678999999999 999999999873 225678888777654
No 292
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.52 E-value=1.9e-07 Score=51.17 Aligned_cols=54 Identities=17% Similarity=0.192 Sum_probs=37.0
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCC
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEG 74 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g 74 (98)
+|+|.+++.+ |+|.|+|.+.|. .......+.|.|..++.+.......+..+.+|
T Consensus 63 ~L~i~~v~~~-D~G~Y~C~a~n~---~g~~~~~~~l~V~~~~~p~~~~~~~~~~~~~G 116 (118)
T 2eo9_A 63 VLQIRYAKLG-DTGRYTCIASTP---SGEATWSAYIEVQEFGVPVQPPRPTDPNLIPS 116 (118)
T ss_dssp EEEEESCCGG-GCCCEEEEEECS---SCEEEEECCEEEECCSCCCCCCCCCCCCCCCC
T ss_pred EEEEccCCcC-CCEEEEEEEEcC---CCcEEEEEEEEEEeCCCCccCCCCCCCccCCC
Confidence 6999999999 999999999985 34455567788876654333322233444444
No 293
>2nw2_A ELS4 TCR alpha chain; T cell receptor, immune system; 1.40A {Homo sapiens} PDB: 2nx5_D 4dzb_A
Probab=98.49 E-value=3.1e-07 Score=55.21 Aligned_cols=77 Identities=14% Similarity=0.176 Sum_probs=47.0
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECC-CCCeeeEeeEEEEEECC--CCCCEEeCCCCceecCCCcEEEEEEcCCC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAG-SGQDLHSQVYTVTVLTP--PQPPKISPGANPVATEGRAIELVCSTSGG 86 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~-~~~~~~~~~~~l~v~~~--~~~p~i~~~~~~~~~~g~~~~l~C~~~~~ 86 (98)
+...+.++|+|++++.+ |+|.|.|.+.... ...........|.|... +..|.+.... . ....++|.|.+.+.
T Consensus 64 ~~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~~~~~~~~fg~gt~L~V~~~~~~~~P~V~~~~--~--~~~~~tl~Cl~~gf 138 (200)
T 2nw2_A 64 SRSKGYSYLLLKELQMK-DSASYLCAVQASGGSYIPTFGRGTSLIVHPYIQNPDPAVYQLR--D--SKSSDKSVCLFTDF 138 (200)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEEC---CCCCCEECCCEEEEEECCCSSCCCEEEEEE--E--CC--CCEEEEEESC
T ss_pred cCCCCEEEEEECccCcc-cCCcEEEEEEcCCcceeeeeCCCEEEEEecCcccCCCeEEEcC--C--CCCCceEEEEeecc
Confidence 45677899999999999 9999999987511 01112223346777643 3456552111 1 11267899999877
Q ss_pred CCCCe
Q psy5866 87 SPDPQ 91 (98)
Q Consensus 87 ~p~~~ 91 (98)
.|...
T Consensus 139 ~P~~~ 143 (200)
T 2nw2_A 139 DSQTN 143 (200)
T ss_dssp CTTCC
T ss_pred cCCcE
Confidence 77643
No 294
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.49 E-value=1e-07 Score=60.83 Aligned_cols=77 Identities=14% Similarity=0.243 Sum_probs=45.0
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEE-------------------ECCCCCCEE--eCCCCceecCCC
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTV-------------------LTPPQPPKI--SPGANPVATEGR 75 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v-------------------~~~~~~p~i--~~~~~~~~~~g~ 75 (98)
.|+|.++..+ | |.|+|.+.+..+. ......+.+.| .....+|.+ .. ......+|.
T Consensus 183 ~L~i~~~~~~-d-G~Y~C~a~n~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~~-~~~~~~~~~ 258 (344)
T 1za6_B 183 VVTVPSSSLG-T-QTYICNVNHKPSN-TKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTLP-PSRDELTKN 258 (344)
T ss_dssp EEEEETTHHH-H-BCEEEEEEEGGGT-EEEEEEECCCCC--------------------CCBCCEEEEEC-CCGGGGGSS
T ss_pred EEEEcHHHcC-C-CcEEEEEEeCCCC-ccceEeecccccccccccCCCCCCccccccCCCCcCCEEEEeC-CChHhccCC
Confidence 6889999998 8 9999999985321 11111111111 011233443 22 222233566
Q ss_pred cEEEEEEcCCCCC-CCeEEEEec
Q psy5866 76 AIELVCSTSGGSP-DPQISVTLQ 97 (98)
Q Consensus 76 ~~~l~C~~~~~~p-~~~~~W~~~ 97 (98)
.+.|.|.+.+..| .+.+.|+++
T Consensus 259 ~~~L~C~~~g~~P~~~~v~W~k~ 281 (344)
T 1za6_B 259 QVSLTCLVKGFYPSDIAVEWESN 281 (344)
T ss_dssp SEEEEEEEEEEBSSCCEEEEESS
T ss_pred cEEEEEEEeeEECCCeEEEEEEC
Confidence 7999999975455 468999875
No 295
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.49 E-value=9.1e-08 Score=51.70 Aligned_cols=47 Identities=15% Similarity=0.244 Sum_probs=34.3
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQP 60 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~ 60 (98)
++.+....+..+|.|.+++.+ |+|.|+|.+.+ ....+.|.|..+|..
T Consensus 55 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~a~~-------~~~~a~L~V~~~p~~ 101 (104)
T 2eny_A 55 RFQATRQGRKYILVVREAAPS-DAGEVVFSVRG-------LTSKASLIVRERSGP 101 (104)
T ss_dssp SCEEEEETTEEEEEECSCCTT-TCSCEEEEETT-------EEEEECEEEECCCSS
T ss_pred CEEEEEcCCEEEEEECCCCHH-HCEEEEEEECC-------eeEEEEEEEeCCCcC
Confidence 444444456778999999999 99999998743 234677888766543
No 296
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=98.49 E-value=9.1e-07 Score=46.70 Aligned_cols=45 Identities=18% Similarity=0.188 Sum_probs=33.9
Q ss_pred EEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 7 IDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 7 ~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
+......+..+|.|.+++.+ |+|.|+|.+.|. .......+.|.|.
T Consensus 53 ~~~~~~~~~~~L~i~~~~~~-D~G~Y~C~a~N~---~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 53 FAEEAEGGLCRLRILAAERG-DAGFYTCKAVNE---YGARQCEARLEVR 97 (99)
T ss_dssp EEEECGGGEEEEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEE
T ss_pred EEEECCCCEEEEEEccCCcC-CCEEEEEEEEEC---CCceeEEEEEEEE
Confidence 33444455668999999999 999999999995 4555566677664
No 297
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.48 E-value=1e-06 Score=46.63 Aligned_cols=40 Identities=23% Similarity=0.316 Sum_probs=32.6
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT 56 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~ 56 (98)
.+..+|.|.+++.. |+|.|+|.+.|. .+..+..+.|.|..
T Consensus 59 ~~~~~L~i~~v~~~-D~G~Y~C~a~n~---~g~~~~~~~l~V~~ 98 (100)
T 2kdg_A 59 KGLHSLIFEVVRAS-DAGAYACVAKNR---AGEATFTVQLDVLA 98 (100)
T ss_dssp TTEEEEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEEC
T ss_pred CCeEEEEECCCCcc-cCEEEEEEEEcC---CCeEEEEEEEEEEe
Confidence 45568999999999 999999999995 45566677777763
No 298
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.48 E-value=1.9e-07 Score=57.08 Aligned_cols=65 Identities=17% Similarity=0.196 Sum_probs=27.1
Q ss_pred ceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCC-----CCeEEEEec
Q psy5866 23 ASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSP-----DPQISVTLQ 97 (98)
Q Consensus 23 v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p-----~~~~~W~~~ 97 (98)
++.+ |+|.|+|.+.. ... ..+.+.+.. .+..........+.+|+.+.|.|.+. +.| .+.+.|+++
T Consensus 11 v~~~-dsg~Y~C~a~g----~~~--~~~~~~~~~--~~~~~~~p~~~~v~~G~~v~L~C~~~-~~~~~~~~~~~v~W~k~ 80 (254)
T 2c1o_A 11 VRPG-TSVKLSCKASG----YSF--TNYWMNWLR--ELVMTQSPLTLSVTIGQPASISCKSS-QSLLYSNGKTYLNWLLQ 80 (254)
T ss_dssp ------------------------------------CCCEEEECSEEEECTTSCEEEEEEES-SCCBCSSSCBCEEEEEE
T ss_pred ecCC-ccEEEEEcCch----hhh--hhhhhheee--ceeEEeCCceEEecCCCcEEEEeecc-CcccccCCCCceEEEEe
Confidence 6788 99999999972 111 122222222 22233323567899999999999986 455 389999974
No 299
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.47 E-value=1.9e-07 Score=51.95 Aligned_cols=39 Identities=23% Similarity=0.372 Sum_probs=32.9
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP 57 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~ 57 (98)
.++|+|.++... |+|.|+|.+.+. ....+..+.|+|..+
T Consensus 79 ~~~L~I~~v~~~-D~G~Y~Cevsn~---~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 79 TVELHIGKVVLG-DRGYYRLEVKAK---DTCDSCGFNIDVEAP 117 (118)
T ss_dssp EEEEEESSCCTT-TCSCEEEEEECS---SCEEEEEECCEEECC
T ss_pred eEEEEEeeCChh-hCEEEEEEEEEc---CCcEEEEEEEEEEcC
Confidence 688999999999 999999999996 456777788888643
No 300
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.47 E-value=2.5e-07 Score=51.37 Aligned_cols=41 Identities=22% Similarity=0.372 Sum_probs=31.4
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
..++++|+|.+++.+ |+|.|+|.+.+.. .......+.|+|+
T Consensus 76 ~~~~~sL~I~~v~~~-DsG~Y~C~v~t~~--~g~~~~~~~L~Vl 116 (123)
T 4gjt_B 76 NPLDGSVLLRNAVQA-DEGEYECRVSTFP--AGSFQARLRLRVL 116 (123)
T ss_dssp CTTBCCEEEESCCSS-SCSEEEEEEEESS--SCEEEEEEEEEC-
T ss_pred cCCEEEEEECCCChH-HCEEEEEEEEECC--CCeEEeEEEEEEE
Confidence 456788999999999 9999999998742 2455566777775
No 301
>3qjh_A 5C.C7 alpha chain; immunoglobulin domain, T cell receptor, immune system; 1.90A {Mus musculus} PDB: 3qiu_C* 3qiw_C* 3qjf_A 3qib_C 2ial_A 2iam_C 2ian_D 4e41_D 4e42_A 3rug_E* 3axl_A
Probab=98.47 E-value=2.9e-06 Score=51.40 Aligned_cols=75 Identities=17% Similarity=0.263 Sum_probs=47.4
Q ss_pred EeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC--CCCCCEEeCCCCceecCCCcEEEEEEcCCC
Q psy5866 9 YRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT--PPQPPKISPGANPVATEGRAIELVCSTSGG 86 (98)
Q Consensus 9 ~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~--~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~ 86 (98)
.+...+.++|+|.+++.+ |+|.|.|.+...............|.|.. .+..|.+...... ...++|.|.+.+.
T Consensus 65 ~~~~~~~~sL~I~~l~~~-DsG~Y~Cav~~~~~~~~~fG~GT~L~V~~~~~~~~p~V~~l~~~----~~~~tl~Cl~~~f 139 (205)
T 3qjh_A 65 FDSKERYSTLHIRDAQLE-DSGTYFCAAEASNTNKVVFGTGTRLQVLPNIQNPDPAVYQLRDS----KSSDKSVCLFTDF 139 (205)
T ss_dssp EETTTTEEEEEECSCCGG-GCEEEEEEEEETTTCCEEEBCCEEEEEECCCSSCCCEEEEEEBC----C--CCEEEEEESC
T ss_pred EcCCCCEEEEEEeccccc-cCeEEEEEEEcCCCCccccCCCEEEEEeCcccCCCCEEEEeccc----CCCcEEEEEEEcc
Confidence 346678999999999999 99999999985321222333345777763 2344554211111 1236899999876
Q ss_pred CC
Q psy5866 87 SP 88 (98)
Q Consensus 87 ~p 88 (98)
.|
T Consensus 140 ~P 141 (205)
T 3qjh_A 140 DS 141 (205)
T ss_dssp CT
T ss_pred cc
Confidence 66
No 302
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=98.47 E-value=5e-07 Score=48.84 Aligned_cols=38 Identities=18% Similarity=0.399 Sum_probs=31.3
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
+..+|+|.+++.+ |+|.|+|.+.|. .+..+..+.|.|.
T Consensus 70 ~~~~L~I~~v~~~-D~G~Y~C~a~N~---~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 70 YLFELHITDAQPA-FTGSYRCEVSTK---DKFDCSNFNLTVH 107 (108)
T ss_dssp EEEEEEECSCCGG-GCEEEEEEEECS---SCEEEEEEEEEEE
T ss_pred ceEEEEEecCCCc-cCEEEEEEEecC---CCceEEEEEEEEe
Confidence 3578999999999 999999999985 4556666777764
No 303
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.46 E-value=9e-07 Score=46.64 Aligned_cols=46 Identities=15% Similarity=0.163 Sum_probs=34.6
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
++.+....+..+|.|.+++.. |+|.|+|.+.+. ....+..+.|.|.
T Consensus 53 ~~~~~~~~~~~~L~i~~v~~~-D~G~Y~C~a~n~---~g~~~~~~~l~V~ 98 (100)
T 3irg_A 53 RFHIENTDDLTTLIIMDVQKQ-DGGLYTLSLGNE---FGSDSATVNIHIR 98 (100)
T ss_dssp TEEEEECSSEEEEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEE
T ss_pred EEEEEecCCEEEEEEeecCcc-cCEEEEEEEEeC---CCcEEEEEEEEEE
Confidence 444444555678999999999 999999999985 4555666666653
No 304
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=98.46 E-value=9.5e-08 Score=58.92 Aligned_cols=77 Identities=12% Similarity=0.271 Sum_probs=47.4
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEE--eCCCCceecCCCcEEEEEEcCCCCCCC-eEE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKI--SPGANPVATEGRAIELVCSTSGGSPDP-QIS 93 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i--~~~~~~~~~~g~~~~l~C~~~~~~p~~-~~~ 93 (98)
.|.|....++ |.|.|+|++.+.... ......+.+. .....+|.+ .. ......+|..+.|.|.+.+.+|.+ .+.
T Consensus 90 ~L~i~~~~~~-d~~~YtC~v~h~~~~-~~~~~~i~~~-~~~~~~P~V~v~~-~~~~~~~g~~~~L~C~~~gf~P~~i~v~ 165 (240)
T 4acp_A 90 VLTVLHQDWL-NGKEYKCKVSNKALP-APIEKTISKA-KGQPREPQVYTLP-PSRDELTKNQVSLTCLVKGFYPSDIAVE 165 (240)
T ss_dssp EEECCHHHHH-HTCCEEEEEECC-----CEEEEECCC-CSCCBCCEEEEEC-CCGGGGGSSEEEEEEEEEEEBSSCCEEE
T ss_pred EEEEechhcc-CCCEEEEEEEcCCCC-cccccccccc-CCCCCCCEEEEEC-CChHHhcCCceEEEEEEeEEeCCCcEEE
Confidence 5788888888 999999999985321 1122222211 122334444 22 223334588999999998657764 899
Q ss_pred EEec
Q psy5866 94 VTLQ 97 (98)
Q Consensus 94 W~~~ 97 (98)
|+++
T Consensus 166 W~k~ 169 (240)
T 4acp_A 166 WESN 169 (240)
T ss_dssp EEET
T ss_pred EEEC
Confidence 9975
No 305
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.45 E-value=2.9e-07 Score=49.31 Aligned_cols=46 Identities=17% Similarity=0.189 Sum_probs=34.2
Q ss_pred EEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCC
Q psy5866 7 IDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQP 60 (98)
Q Consensus 7 ~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~ 60 (98)
+.+....+...|.|.+++.+ |+|.|+|.+.+ .+..+.|.|..+|.+
T Consensus 55 ~~~~~~~~~~~L~I~~~~~~-D~G~Y~C~a~n-------~~~~~~l~V~~~p~p 100 (103)
T 1x44_A 55 YRIRVEGKKHILIIEGATKA-DAAEYSVMTTG-------GQSSAKLSVDLKSGP 100 (103)
T ss_dssp EEEEEETTEEEEEEEEECTT-TCSEEEEEETT-------EEEEEEEEEECCCSC
T ss_pred EEEEEcCCEEEEEECCCCcc-cCEEEEEEECC-------CcEEEEEEEeCCCCC
Confidence 34444445678999999999 99999999864 355677888766654
No 306
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=98.45 E-value=8.3e-08 Score=53.77 Aligned_cols=54 Identities=19% Similarity=0.258 Sum_probs=35.0
Q ss_pred EEEEe--CCCCeEEEEEccceeeccCeEEEEEEEECCCCCeee-EeeEEEEEECCCCCC
Q psy5866 6 IIDYR--PDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLH-SQVYTVTVLTPPQPP 61 (98)
Q Consensus 6 ~~~~~--~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~-~~~~~l~v~~~~~~p 61 (98)
|+.+. ...+.++|+|.+++.+ |+|.|.|.+..... .... ...+.|.|..++..|
T Consensus 76 R~~~~~~~~~~~~sL~I~~v~~~-DsG~Y~C~v~~~~~-~~~~~~~~~~l~V~~~~~~p 132 (132)
T 1nko_A 76 RFHLLGDPQTKNCTLSIRDARMS-DAGRYFFRMEKGNI-KWNYKYDQLSVNVTALTHRP 132 (132)
T ss_dssp TEEECSCGGGTBCCEEECSCCGG-GCEEEEEEEEETTE-EEECTTSCEEEEEECCC---
T ss_pred cEEEeCCCCCCceEEEEcccCcc-cCeeEEEEEEcCCC-cccccCCceEEEecccCCCc
Confidence 44443 2456789999999999 99999999987420 1111 235677777665543
No 307
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=98.44 E-value=2.8e-07 Score=48.94 Aligned_cols=43 Identities=14% Similarity=0.139 Sum_probs=31.3
Q ss_pred eEEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 5 EIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 5 ~~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
.++.+....+..+|.|.+++.+ |+|.|+|.+.+. ...+.|.|.
T Consensus 49 ~~~~i~~~g~~~~L~I~~v~~~-D~G~Y~C~a~n~-------~~sa~L~V~ 91 (93)
T 1waa_A 49 PDCEIIEDGKKHILILHNCQLG-MTGEVSFQAANT-------KSAANLKVK 91 (93)
T ss_dssp TTEEEEEETTEEEEEECSCCGG-GCEEEEEEETTE-------EEEEEEEEE
T ss_pred CCEEEEEECCEEEEEECCCChh-hCEEEEEEECCC-------cEEEEEEEE
Confidence 3444444456678999999999 999999998752 245667665
No 308
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=98.44 E-value=3.9e-07 Score=56.76 Aligned_cols=90 Identities=13% Similarity=0.132 Sum_probs=53.3
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC---C-----------------CCCEEeC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP---P-----------------QPPKISP 65 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~---~-----------------~~p~i~~ 65 (98)
||....+..+++|+|++++.+ |++.|.|....... ...-...+|.|... | ....+..
T Consensus 61 RFSgS~Sgt~ftLtIs~lq~e-D~A~YyC~~~~~~~--~tFG~GTkLeikr~~aa~~~s~~~~s~~a~ssGv~sqvqL~e 137 (259)
T 4f9l_D 61 RFSGSGSATGFTLTISSLQPE-DIATYYCQQGHSYP--YTFGGGTKLDIKRADAGGGGSGGGGSGGGGSGGGGSQVQLQE 137 (259)
T ss_dssp TEEEEEETTEEEEEEESCCGG-GCEEEEEEECSSSS--CCBCCCCEECBCCC----------------------CCCEEE
T ss_pred CEEeeccCCeEEEEEcccChh-hCEEEEEeecCCCC--CCccCCeEEEEeccccCccccccccccccccCCccccceEEe
Confidence 455555567899999999999 99999998654311 11111112222100 0 0011111
Q ss_pred CCCceecCCCcEEEEEEcCCCCC-CCeEEEEecC
Q psy5866 66 GANPVATEGRAIELVCSTSGGSP-DPQISVTLQV 98 (98)
Q Consensus 66 ~~~~~~~~g~~~~l~C~~~~~~p-~~~~~W~~~~ 98 (98)
.....+++|..+.|+|.+.+..- .-.+.|+||.
T Consensus 138 SG~~lvkPG~Sl~LSC~aSG~tfs~y~~~WvRQa 171 (259)
T 4f9l_D 138 SGAELVKPGASVKLSCKASGYTFTRYYLYWVKQR 171 (259)
T ss_dssp ECCCEEESSSCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred ECCCEECCCCcEEEEEeeeCCCcccCcEEEEEEC
Confidence 12356889999999999874332 2358899883
No 309
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.43 E-value=4.1e-07 Score=49.97 Aligned_cols=41 Identities=20% Similarity=0.233 Sum_probs=32.8
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ 59 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~ 59 (98)
..+|+|.+++.+ |+|.|+|.+.+. .+.....+.|.|+.+|.
T Consensus 73 ~~~L~I~~v~~~-DsG~Y~C~a~n~---~g~~~~~~~l~V~~~p~ 113 (122)
T 3s35_X 73 LSTLTIDGVTRS-DQGLYTCAASSG---LMTKKNSTFVRVHEKPF 113 (122)
T ss_dssp EEEEEESSCCGG-GCEEEEEEEECS---SCEEEEEEEEEEEEEEC
T ss_pred EEEEEECCCCcc-cCEEEEEEEccC---CCceEEEEEEEEeccCe
Confidence 457999999999 999999999985 45556677888875543
No 310
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.43 E-value=3.3e-07 Score=49.74 Aligned_cols=29 Identities=21% Similarity=0.485 Sum_probs=25.6
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 62 ~~~~~~~~L~I~~~~~~-DsG~Y~C~~~~~ 90 (110)
T 2q87_A 62 SPANLSFTVTLENLTEE-DAGTYWCGVDTP 90 (110)
T ss_dssp EGGGTEEEEEESSCCGG-GCEEEEEEEECT
T ss_pred cCcCCEEEEEEccCCHH-HCEEEEEEEecC
Confidence 34567899999999999 999999999875
No 311
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=98.43 E-value=1.4e-06 Score=45.96 Aligned_cols=40 Identities=15% Similarity=0.131 Sum_probs=32.0
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
..+..+|.|.+++.+ |+|.|+|.+.|. .+.....+.|.|.
T Consensus 58 ~~~~~~L~i~~v~~~-D~G~Y~C~a~N~---~g~~~~~~~l~V~ 97 (99)
T 1g1c_A 58 EDNVCELVIRDVTGE-DSASIMVKAINI---AGETSSHAFLLVQ 97 (99)
T ss_dssp ETTEEEEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEE
T ss_pred CCCEEEEEECCCCcC-CCEEEEEEEEEC---CCcEEEEEEEEEe
Confidence 345678999999999 999999999995 4555566677765
No 312
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.43 E-value=2e-07 Score=50.98 Aligned_cols=40 Identities=28% Similarity=0.499 Sum_probs=30.4
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
..++++|+|.+++.+ |+|.|.|.+.... ......+.|.|.
T Consensus 70 ~~~~~sL~I~~v~~~-DsG~Y~C~v~~~~---~~~~~~v~L~V~ 109 (115)
T 2or7_A 70 SEGNVSLTIENTVVG-DGGPYCCVVEIPG---AFHFVDYMLEVK 109 (115)
T ss_dssp GGTBCCEEESSCCGG-GCEEEEEEECCTT---SCEEEEEEEEEE
T ss_pred cCCeEEEEEccCCHH-HCEEEEEEEECCC---ceeEEEEEEEEc
Confidence 456789999999999 9999999998742 223555666664
No 313
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.42 E-value=4.3e-07 Score=48.74 Aligned_cols=43 Identities=14% Similarity=0.174 Sum_probs=28.9
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCC
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p 61 (98)
..+|.|.+++.+ |+|.|+|.+.+. .+.....+.|.|..++..+
T Consensus 63 ~~~L~i~~v~~~-D~G~Y~C~a~n~---~g~~~~~~~l~V~~~~~~~ 105 (108)
T 3kvq_A 63 NRNLTIRRVRKE-DEGLYTCQACSV---LGCAKVEAFFIIEGAQEKT 105 (108)
T ss_dssp TTEEEECSCCGG-GCEEEEEEEC-------CEEEEEEEEEEC-----
T ss_pred CcEEEEeecCcc-cCEEEEEEEEeC---CCceEEEEEEEEeCCCccc
Confidence 356999999999 999999999985 4555666788887666554
No 314
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.42 E-value=1.3e-07 Score=50.89 Aligned_cols=40 Identities=25% Similarity=0.583 Sum_probs=29.0
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
..+.++|+|.+++.+ |+|.|.|.+.+.. ......+.|.|.
T Consensus 68 ~~~~~sL~I~~v~~~-D~G~Y~C~v~~~~---~~~~~~~~l~V~ 107 (109)
T 2oyp_A 68 NKGDVSLIIKNVTLD-DHGTYCCRIQFPG---LMNDKKLELKLD 107 (109)
T ss_dssp GGTBCCEEECSCCGG-GCEEEEEEECCSS---TTCCEEEEEEEE
T ss_pred cCCcEeEEEccCCCh-hCeEEEEEEEcCC---cccceEEEEEEE
Confidence 345678999999999 9999999998752 223334555553
No 315
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.41 E-value=1.7e-07 Score=49.73 Aligned_cols=34 Identities=15% Similarity=0.375 Sum_probs=27.2
Q ss_pred eeEEEEeCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 4 VEIIDYRPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 4 ~~~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
+.++.+....+..+|.|.++..+ |+|.|+|.|.+
T Consensus 49 ~~~~~i~~~~~~~~L~I~~v~~~-D~G~Y~C~a~n 82 (91)
T 2lvc_A 49 SDFVVLENEGPHRRLVLPATQPS-DGGEFQCVAGD 82 (91)
T ss_dssp CSSCEEEEETTEEEEEESSCCGG-GCSEEEEECSS
T ss_pred eeeeeEEecCCeEEEEeCCCChh-hcEEEEEEEcc
Confidence 34455555567788999999999 99999999865
No 316
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.41 E-value=8.7e-07 Score=48.09 Aligned_cols=47 Identities=26% Similarity=0.371 Sum_probs=33.8
Q ss_pred eEEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC
Q psy5866 5 EIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ 59 (98)
Q Consensus 5 ~~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~ 59 (98)
.++.+....+...|.|.+++.+ |+|.|+|.+. . ....+.|.|..+|.
T Consensus 62 ~~~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~a~-----~--~~~~~~l~V~~~p~ 108 (113)
T 2edh_A 62 DRHSLRQDGARCELQIRGLVAE-DAGEYLCMCG-----K--ERTSAMLTVRAMPS 108 (113)
T ss_dssp SSEEEEEETTEEEEEECSCCST-TCEEEEEEET-----T--EEEEEEEEECCCCC
T ss_pred CcEEEEECCCEEEEEECCCChh-hCEEEEEEeC-----C--CCEEEEEEEeCCCC
Confidence 4455554556778999999999 9999999992 2 33456777765554
No 317
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.41 E-value=5e-07 Score=48.61 Aligned_cols=39 Identities=15% Similarity=0.169 Sum_probs=31.1
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP 58 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~ 58 (98)
..|.|.+++.+ |+|.|+|.+.|. .+..+..+.|.|..+|
T Consensus 62 ~~L~I~~v~~~-D~G~Y~C~A~N~---~G~~~~~~~l~V~~~P 100 (103)
T 1wwb_X 62 GCLQLDNPTHM-NNGDYTLIAKNE---YGKDEKQISAHFMGWP 100 (103)
T ss_dssp EEEEEESCCGG-GCEEEEEEEECS---SCEEEEEEEECCSCCC
T ss_pred EEEEECCCCcc-cCEEEEEEEEeC---CCcEeEEEEEEECCCC
Confidence 45999999999 999999999995 4556666777776444
No 318
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.40 E-value=5.4e-07 Score=51.35 Aligned_cols=46 Identities=20% Similarity=0.235 Sum_probs=33.4
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
++.+....+...|.|.+++.. |+|.|+|.+.|. .+..+..+.|.|+
T Consensus 93 r~~i~~~~~~s~L~I~~v~~~-DsG~Y~C~A~N~---~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 93 RVRVETTKDRSIFTVEGAEKE-DEGVYTVTVKNP---VGEDQVNLTVKVI 138 (139)
T ss_dssp SCEEEEETTEEEEECSCCCTT-TCEEEEEEEECS---SCEEEEEEEEEEC
T ss_pred eEEEEeCCCEEEEEECCCCcc-cCEEEEEEEEeC---CceEEEEEEEEEE
Confidence 333333344567999999999 999999999996 4455566666663
No 319
>2pkd_A SLAM family member 5; signaling lymphocyte activation molecule, IGV, immunoglobulin variable, IGC, immunoglobulin constant, signaling protein; 2.04A {Homo sapiens}
Probab=98.39 E-value=7.5e-07 Score=48.89 Aligned_cols=42 Identities=19% Similarity=0.453 Sum_probs=32.0
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
..++++|+|.|++.+ |+|.|.|.+..... .......+.|.|+
T Consensus 68 ~~~~~SL~I~nl~~~-DsG~Y~c~i~~~~~-~~~~~~~~~L~V~ 109 (111)
T 2pkd_A 68 LGPNYNLVISDLRME-DAGDYKADINTQAD-PYTTTKRYNLQIY 109 (111)
T ss_dssp CTTTCCEEECSCCGG-GCEEEEEEEEESST-TSEEEEEEEEEEE
T ss_pred eCCCEEEEECCCCHH-HCEEEEEEEEeCCC-CceEEEEEEEEEE
Confidence 345678999999999 99999999987532 2234556777776
No 320
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.39 E-value=1.5e-08 Score=66.53 Aligned_cols=78 Identities=15% Similarity=0.204 Sum_probs=47.7
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEE--EEECCCCCCEEeCCCCceecCCCcEEEEEEcCCCCCC-CeE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTV--TVLTPPQPPKISPGANPVATEGRAIELVCSTSGGSPD-PQI 92 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l--~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~ 92 (98)
..|+|.++..+ |+|.|+|.+.+..+.. .....+.+ .+..+|.. .+.+.. ....+|..+.|.|.+.+.+|+ +.+
T Consensus 295 ~~L~i~~~~~~-d~G~Y~C~a~n~~~~~-~~~~~v~~~~~~~~~P~v-~~~~~~-~~~~~~~~~~L~C~~~g~~P~~~~v 370 (434)
T 1igy_B 295 SALPIMHQDWL-NGKEFKCRVNSAAFPA-PIEKTISKTKGKPRAPQV-YTIPPP-KEQMAKDKVSLTCMITDFFPEDITV 370 (434)
T ss_dssp CCEECCHHHHH-HTCCCBCCBCCSSCSS-CCCCCCCCCCSCCBCCCC-EEECCC-SSSSSSSEEEEEEEEEEEBCSCEEE
T ss_pred EEEEECHHHcc-CCCcEEEEEECCCCCC-ceeEEEeccCCCCcCCEE-EEECCC-HHHhcCCcEEEEEEEEeeECCCeEE
Confidence 35899999999 9999999999854321 11112222 12122222 223212 223457789999999754554 489
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 371 ~W~k~ 375 (434)
T 1igy_B 371 EWQSD 375 (434)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99985
No 321
>3bia_X T-cell immunoglobulin and mucin domain- containing protein 4; beta barrel, immunoglobulin fold, IGV domain, TIM, glycoprotein; HET: TLA; 2.20A {Mus musculus} PDB: 3bi9_X* 3bib_X*
Probab=98.38 E-value=6.1e-07 Score=49.13 Aligned_cols=47 Identities=21% Similarity=0.306 Sum_probs=32.4
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP 58 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~ 58 (98)
+...+.++|+|.+++.+ |+|.|.|.+.... ........+.|.|..+|
T Consensus 67 ~~~~~~~sL~I~~v~~~-Dsg~Y~C~v~~~~-~~~~~~~~v~L~V~~~~ 113 (116)
T 3bia_X 67 KVQFGEVSLTISNTNRG-DSGVYCCRIEVPG-WFNDVKKNVRLELRRAL 113 (116)
T ss_dssp CGGGTBCCEEECSCCGG-GCEEEEEEEECSS-SSCCEEEEEEEEEECC-
T ss_pred cCCCCEEEEEEccCChh-HCEEEEEEEEcCC-cccceEEEEEEEEecCC
Confidence 34567889999999999 9999999998631 11222445666665433
No 322
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=98.37 E-value=1.1e-06 Score=46.32 Aligned_cols=39 Identities=23% Similarity=0.389 Sum_probs=30.2
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ 59 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~ 59 (98)
+|.|.+++.+ |+|.|+|.+.+. ....+..+.|.|..++.
T Consensus 52 ~L~i~~~~~~-D~G~Y~C~a~n~---~g~~~~~~~l~V~~~~~ 90 (95)
T 4hwu_A 52 YLQIKGATPR-DSGLYACTAART---VDSETWIFMVNVTDAAE 90 (95)
T ss_dssp EEEECSCCGG-GCEEEEEEEECS---SCEEEEEEEEEECCC--
T ss_pred EEEECcCCcc-cCEEEEEEEccC---CCcEEEEEEEEEeCCcc
Confidence 6999999999 999999999985 34556667777765543
No 323
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.36 E-value=5.9e-07 Score=48.52 Aligned_cols=45 Identities=13% Similarity=0.229 Sum_probs=33.1
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEE
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTV 54 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v 54 (98)
++......+..+|.|.+++.. |+|.|+|.+.|. .+..+..+.|.|
T Consensus 60 ~~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~a~N~---~G~~~~~~~l~V 104 (106)
T 1nct_A 60 RHQVTTTKYKSTFEISSVQAS-DEGNYSVVVENS---EGKQEAEFTLTI 104 (106)
T ss_dssp SEEEEECSSEEEEEECCCCSS-CCSEEEECCBCS---SCBCCEEEEEEE
T ss_pred CEEEEECCCEEEEEECcCCch-hCEEEEEEEEeC---CCeEEEEEEEEE
Confidence 444444555778999999999 999999999985 334455566665
No 324
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.36 E-value=8.1e-07 Score=47.40 Aligned_cols=48 Identities=15% Similarity=0.145 Sum_probs=34.0
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p 61 (98)
++.+....+...|+|.+++.+ |+|.|+|.+ ......+.|.|...|.+|
T Consensus 53 ~~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~-------g~~~~~~~l~V~~~p~~p 100 (103)
T 2dku_A 53 KHQPSQEGLTLRLTISALEKA-DSDTYTCDI-------GQAQSRAQLLVQGRRSGP 100 (103)
T ss_dssp SEEEEEETTEEEEEEESCCTT-TCSEEEEEC-------SSCBCCEEEEEECSCCCC
T ss_pred eEEEEeCCCEEEEEECCCCcc-cCEEEEEEe-------CCceEEEEEEEeCccCCC
Confidence 444444556778999999999 999999982 122335678887766554
No 325
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.35 E-value=6.2e-07 Score=50.42 Aligned_cols=49 Identities=22% Similarity=0.279 Sum_probs=36.0
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCC--C-eeeEeeEEEEEECCCCCCEE
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSG--Q-DLHSQVYTVTVLTPPQPPKI 63 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~--~-~~~~~~~~l~v~~~~~~p~i 63 (98)
..++|+|.+++.+ |+|.|.|.+.+.... . ........|.|..+|..|.|
T Consensus 77 ~~~~L~I~~v~~~-DsG~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~~s~P~i 128 (136)
T 2d9c_A 77 LDFSISISNITPA-DAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPSAPVV 128 (136)
T ss_dssp CBCCEEESSCCTT-TCEEEEEEEEECCSSSCEEEEECCCEEEEEECCCCCCCC
T ss_pred CEEEEEECCCCHH-HCEEEEEEEEeCCCCcccceeeCCCeEEEEEeCCCCCcE
Confidence 4678999999999 999999999874210 0 11224578889887777766
No 326
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.35 E-value=1.7e-06 Score=45.32 Aligned_cols=38 Identities=18% Similarity=0.370 Sum_probs=30.1
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTV 54 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v 54 (98)
.+...|.|.++..+ |+|.|+|.+.|. .+..+..+.|.|
T Consensus 55 ~~~~~L~i~~~~~~-D~G~Y~C~a~N~---~G~~~~~~~l~V 92 (93)
T 1wit_A 55 SSTTSIFFPSAKRA-DSGNYKLKVKNE---LGEDEAIFEVIV 92 (93)
T ss_dssp TTEEEEECTTBCGG-GCEEEEEEEEET---TEEEEEEEEEEE
T ss_pred CCEEEEEECCCChh-cCEEEEEEEEcC---CCeEEEEEEEEE
Confidence 44578999999999 999999999995 455555566655
No 327
>1ymm_D T cell receptor alpha chain; protein-protein complex, T cell repertoire, auto-immunity, I system; HET: NAG; 3.50A {Homo sapiens} SCOP: b.1.1.1
Probab=98.35 E-value=5.4e-08 Score=58.81 Aligned_cols=77 Identities=12% Similarity=0.183 Sum_probs=25.6
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECC-CCCeeeEeeEEEEEECC--CCCCEEeCCCCceecCCCcEEEEEEcCCCC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAG-SGQDLHSQVYTVTVLTP--PQPPKISPGANPVATEGRAIELVCSTSGGS 87 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~-~~~~~~~~~~~l~v~~~--~~~p~i~~~~~~~~~~g~~~~l~C~~~~~~ 87 (98)
...+.++|+|.+++.+ |+|.|.|.+.+.. ...........|.|... +..|.+..... ....++|.|.+.+..
T Consensus 67 ~~~~~~sL~I~~~~~~-Dsg~Y~C~~~~~~~~~~~~~g~gt~L~V~~~~~~~~P~V~~~~~----~~~~vtL~C~~~gf~ 141 (207)
T 1ymm_D 67 TSKKSSSLLITASRAA-DTASYFCATDTTSGTYKYIFGTGTRLKVLANIQNPDPAVYQLRD----SKSSDKSVCLFTDFD 141 (207)
T ss_dssp GGGTBCCBCCSSCCST-TCSCCEEEEEETTSCSCEEECC-----------------------------------------
T ss_pred CCCCEEEEEECcCCcc-cCceEEEEEEcCCCcceeeECCCEEEEEECCCCCCCCEEEecCC----CCCCeEEEEEccccc
Confidence 3456788999999999 9999999998731 00111112345666432 23344421111 123689999998778
Q ss_pred CCCeE
Q psy5866 88 PDPQI 92 (98)
Q Consensus 88 p~~~~ 92 (98)
|.+.+
T Consensus 142 P~p~v 146 (207)
T 1ymm_D 142 SQTNV 146 (207)
T ss_dssp -----
T ss_pred cCCcc
Confidence 87755
No 328
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.35 E-value=7.9e-07 Score=47.30 Aligned_cols=45 Identities=13% Similarity=0.159 Sum_probs=32.1
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP 58 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~ 58 (98)
++.+........|.|.+++.+ |+|.|+|.+. . ....+.|.|..+|
T Consensus 53 ~~~~~~~~~~~~L~I~~~~~~-D~G~Y~C~ag-----~--~~~~~~l~V~~~P 97 (100)
T 2yuv_A 53 KYIFEHKGCQRILFINNCQMT-DDSEYYVTAG-----D--EKCSTELFVRSGP 97 (100)
T ss_dssp TEEEEEETTEEEEEEEEECTT-TCCEEEEEET-----T--EEEEEEEEECCSC
T ss_pred CEEEEecCCEEEEEEcCCCcC-cCEEEEEEEC-----C--ceEEEEEEEecCC
Confidence 444444455678999999999 9999999991 2 2345677776554
No 329
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.35 E-value=5.4e-07 Score=48.83 Aligned_cols=38 Identities=26% Similarity=0.256 Sum_probs=29.2
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT 56 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~ 56 (98)
+.++|+|.+++.+ |+|.|.|.+.+.. .....+.|.|+.
T Consensus 71 ~~~sL~I~~v~~~-DsG~Y~C~v~~~~----~~~~~~~L~V~d 108 (110)
T 2ptt_A 71 NNGALHISNVRKE-DKGTYYMRVLRET----ENELKITLEVFD 108 (110)
T ss_dssp TTCCEEESSCCGG-GCEEEEEEEESSS----BCCEEEEEEEEC
T ss_pred CCccEEECCCCcc-cCeEEEEEEEcCC----CcEEEEEEEEEc
Confidence 5678999999999 9999999997642 233356777763
No 330
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=98.34 E-value=9.1e-06 Score=52.16 Aligned_cols=65 Identities=15% Similarity=0.217 Sum_probs=45.7
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEc
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCST 83 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~ 83 (98)
..+...|.|.++... |+|.|+|.+.|. .+.....+.+.+..+|.+|... ......+..+.|.|..
T Consensus 154 ~~~~~~L~i~~~~~~-d~G~Y~C~a~N~---~G~~~~~~~l~v~~~P~~P~~~---~~~~~~~~~~~l~w~~ 218 (389)
T 2jll_A 154 TGRKMILEIAPTSDN-DFGRYNCTATNH---IGTRFQEYILALADVPSSPYGV---KIIELSQTTAKVSFNK 218 (389)
T ss_dssp CSSCEEEEECCCSTT-SSEEEEEEEEET---TEEEEEEEEEEECCCCCCCEEE---EEEEECSSCEEEEEEC
T ss_pred cCCEEEEEECCCChh-hCEEEEEEEEcC---CCcEEEEEEEEecCCCCCCcce---EEeeccCCEEEEEEeC
Confidence 344568999999999 999999999995 4555566777776677666321 1122335678888874
No 331
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.34 E-value=5.9e-07 Score=48.89 Aligned_cols=42 Identities=24% Similarity=0.426 Sum_probs=29.6
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
..+.++|+|.+++.+ |+|.|.|.+.+... .......+.|.|.
T Consensus 69 ~~~~~sL~I~~v~~~-DsG~Y~C~v~~~~~-~~~~~~~~~l~V~ 110 (116)
T 2or8_A 69 SEGDVSLTIENSVES-DSGLYCCRVEIPGW-FNDQKVTFSLQVK 110 (116)
T ss_dssp GGTBCCEEESSCCGG-GCEEEEEEECCSST-TCCEEEEEEEEEE
T ss_pred CCCeEEEEECCCCcc-cCEEEEEEEEcCCc-ccccEEEEEEEEC
Confidence 456788999999999 99999999987421 1112444555553
No 332
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.34 E-value=2.6e-06 Score=48.79 Aligned_cols=44 Identities=20% Similarity=0.269 Sum_probs=34.3
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQP 60 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~ 60 (98)
.+...|.|.+++.. |+|.|+|.+.|. .+.....+.|.|..+|..
T Consensus 95 ~~~~~L~I~~v~~~-D~G~Y~C~a~N~---~G~~~~~~~l~V~~~p~~ 138 (154)
T 1fhg_A 95 EGNCSLTISEVCGD-DDAKYTCKAVNS---LGEATCTAELLVETMGKE 138 (154)
T ss_dssp TCEEEEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEECC---
T ss_pred CCeEEEEECCCChh-cCEEEEEEEEEC---CCeEEEEEEEEEeCcCcC
Confidence 45678999999999 999999999995 455666778888766543
No 333
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.33 E-value=7.9e-07 Score=48.15 Aligned_cols=45 Identities=27% Similarity=0.555 Sum_probs=33.5
Q ss_pred EEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC
Q psy5866 7 IDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ 59 (98)
Q Consensus 7 ~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~ 59 (98)
+.+........|.|.+++.+ |+|.|+|.+.+ .+..+.|.|..+|.
T Consensus 59 ~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~a~n-------~~~~~~l~V~~~p~ 103 (113)
T 2cpc_A 59 LLLQKEDTVRRLVLPAVQLE-DSGEYLCEIDD-------ESASFTVTVTEPPV 103 (113)
T ss_dssp BEEEECSSEEEEEESSCCTT-TCEEEEEESSS-------CEEEEEEEEECCCC
T ss_pred EEEEECCCEEEEEECCCCcc-cCEEEEEEEec-------CcEEEEEEEecCCc
Confidence 33334445578999999999 99999999875 34567788876663
No 334
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.31 E-value=3.8e-06 Score=56.58 Aligned_cols=75 Identities=16% Similarity=0.170 Sum_probs=46.5
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC--CCCCEEeCCCCceecCCCcEE-EEEEcCCCCCCC-eE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP--PQPPKISPGANPVATEGRAIE-LVCSTSGGSPDP-QI 92 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~--~~~p~i~~~~~~~~~~g~~~~-l~C~~~~~~p~~-~~ 92 (98)
.|.|..+..+ |.|.|+|.|.+...... ...+.. +... +.+|.+....... +|+.+. |.|.+.+.+|+. .+
T Consensus 362 ~L~i~~~~~~-d~g~y~C~a~n~~~~~~--~~~~~~-~~~~~~~~~p~v~~~~~~~--~~~~~~~L~C~~~g~~P~~i~v 435 (512)
T 1zvo_C 362 RLTLPRSLWN-AGTSVTCTLNHPSLPPQ--RLMALR-EPAAQAPVKLSLNLLASSD--PPEAASWLLCEVSGFSPPNILL 435 (512)
T ss_pred EEEEchHHhc-CCCeEEEEEEeCCCCCC--ceeEEe-ecCCCCCCCCEEEEEccCc--CCCCceEEEEEEeeeCCCCcEE
Confidence 4889999999 99999999998643211 222211 1111 2334432111111 788899 999997656654 68
Q ss_pred EEEec
Q psy5866 93 SVTLQ 97 (98)
Q Consensus 93 ~W~~~ 97 (98)
.|+++
T Consensus 436 ~W~k~ 440 (512)
T 1zvo_C 436 MWLED 440 (512)
T ss_pred EEEEC
Confidence 99975
No 335
>1u9k_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immunity, immune system receptor, immune system; 1.76A {Mus musculus} SCOP: b.1.1.1
Probab=98.30 E-value=1.7e-06 Score=47.35 Aligned_cols=29 Identities=14% Similarity=0.439 Sum_probs=25.7
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 70 ~~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~ 98 (114)
T 1u9k_A 70 DPSEAMLQVQMTDLQVT-DSGLYRCVIYHP 98 (114)
T ss_dssp EGGGTEEEEEECSCCGG-GCEEEEEEEECT
T ss_pred cCcCCEEEEEECCCChH-HCEEEEEEEecC
Confidence 45677899999999999 999999999874
No 336
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=98.30 E-value=1.5e-06 Score=48.85 Aligned_cols=42 Identities=12% Similarity=0.116 Sum_probs=34.3
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCC
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQP 60 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~ 60 (98)
...|.|.++... |+|.|+|.|.|. .+.....+.|.|+..|..
T Consensus 62 ~~~L~i~~~~~~-D~G~YtC~A~N~---~G~~~~t~~l~v~~~P~~ 103 (126)
T 1he7_A 62 HGCLRLNQPTHV-NNGNYTLLAANP---FGQASASIMAAFMDNPFE 103 (126)
T ss_dssp EEEEEEESCCGG-GCEEEEEEEEET---TEEEEEEEEECCCSCTTS
T ss_pred ceEEEECcCCCC-CCEEEEEEEEEC---CCeEEEEEEEEEEcCCCC
Confidence 467999999999 999999999996 566667777877766643
No 337
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.28 E-value=3.8e-06 Score=46.06 Aligned_cols=38 Identities=16% Similarity=0.115 Sum_probs=29.7
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT 56 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~ 56 (98)
.+|.|.+++.+ |+|.|+|++.+... ...+..+.|.|..
T Consensus 72 gSL~I~nvt~~-D~G~Ytc~v~~~~~--~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 72 ASLLIQNIIQN-DAGFYTLHVIKSDL--VNEEATGQFRVYP 109 (111)
T ss_dssp SCEEECSCCGG-GCEEEEEEEEETTS--CCEEEEEEEEEEC
T ss_pred CcEEEccCccc-CCeEEEEEEEeCCC--cEEEEEEEEEEec
Confidence 37999999999 99999999998522 2356667777763
No 338
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.26 E-value=1.8e-06 Score=47.85 Aligned_cols=36 Identities=14% Similarity=0.279 Sum_probs=27.3
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVT 53 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~ 53 (98)
+++|+|.+++.+ |+|.|+|.+.+.. ....+..+.|.
T Consensus 92 ~~sL~I~~v~~~-D~G~Y~C~v~~~~--~g~~~~~~~L~ 127 (128)
T 3r0n_A 92 DATLALHGLTVE-DEGNYTCEFATFP--KGSVRGMTWLR 127 (128)
T ss_dssp BCCEEECSCCGG-GCEEEEEEEEEET--TEEEEEEEEEE
T ss_pred CeEEEEccCCch-hCeEEEEEEEeCC--CCCcccEEEEE
Confidence 678999999999 9999999987642 24444445554
No 339
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=98.25 E-value=9.1e-07 Score=50.66 Aligned_cols=48 Identities=17% Similarity=0.134 Sum_probs=33.0
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP 57 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~ 57 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+.. ........|.|..+
T Consensus 60 Rfs~~~~~~~~sL~I~~l~~~-DsG~Y~C~~~~~~---~~fg~gt~L~V~~~ 107 (143)
T 3u6r_L 60 RFSGSGSGTDFTLTISNLEPE-DFAVYYCQQRSDW---VTFGGGTKVEIKAA 107 (143)
T ss_dssp TEEEEEETTEEEEEECSCCGG-GCEEEEEEECSSB---CEECCCEEEEEC--
T ss_pred cEeEEccCCEEEEEEccCccc-CCEEEEEEEecCC---CEECCCEEEEECCC
Confidence 444444567889999999999 9999999987632 22333356776543
No 340
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.25 E-value=4.1e-06 Score=45.74 Aligned_cols=41 Identities=17% Similarity=0.214 Sum_probs=32.2
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP 58 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~ 58 (98)
+..+|.|.+++.. |+|.|+|.+.|. .+.....+.|.|...|
T Consensus 63 ~~~~L~i~~~~~~-d~G~Y~C~a~N~---~G~~~~~~~l~v~~~P 103 (118)
T 1wwc_A 63 SEGCLLFNKPTHY-NNGNYTLIAKNP---LGTANQTINGHFLKEP 103 (118)
T ss_dssp EEEEEEEESCCGG-GCEEEEEEEEET---TEEEEEEEEECCSCCC
T ss_pred ccEEEEECCCChh-cCEEEEEEEECC---CCeEeeEEEEEEccCC
Confidence 3557999999999 999999999995 4566666777665444
No 341
>2jjs_C Leukocyte surface antigen CD47; signal regulatory protein alpha, immunoglobulin superfamily, transmembrane, phosphoprotein, paired receptor; HET: NAG; 1.85A {Homo sapiens} PDB: 2jjt_C* 2vsc_A*
Probab=98.25 E-value=1.1e-06 Score=49.40 Aligned_cols=46 Identities=9% Similarity=0.182 Sum_probs=33.6
Q ss_pred CCCeEEEEEcccee-eccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCC
Q psy5866 12 DSGRYDLIISNASF-ERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61 (98)
Q Consensus 12 ~~~~~~l~I~~v~~-~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p 61 (98)
..|+.+|+|.+++. + |+|.|+|.+... .......+.|.|...+..|
T Consensus 74 ~~GnaSL~i~~v~~~s-D~G~YtC~v~~~---~~~~~~~i~Lkv~~~~~~~ 120 (127)
T 2jjs_C 74 LKGDASLKMDKSDAVS-HTGNYTCEVTEL---TREGETIIELKYRVVSWST 120 (127)
T ss_dssp GGTBCCEEEEHHHHHT-SCEEEEEEEEET---TEEEEEEEEEEECCC----
T ss_pred ccCcEEEEEccccccc-CCcEEEEEEEeC---CceEEEEEEEEEEeccccC
Confidence 35678999999998 8 999999999984 4445666778876555444
No 342
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.25 E-value=2.4e-06 Score=45.38 Aligned_cols=38 Identities=13% Similarity=0.329 Sum_probs=29.5
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP 58 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~ 58 (98)
.|.|.+++.. |+|.|+|.+.+. .......+.|.|...+
T Consensus 55 ~L~i~~v~~~-D~G~Y~C~a~n~---~g~~~~~~~l~V~~~~ 92 (99)
T 2cr3_A 55 EVEVQDSVPA-DSGLYACVTSSP---SGSDTTYFSVNVSDAL 92 (99)
T ss_dssp EEEETTCCTT-TCEEEEEEEEET---TEEEEEEEEECBCSCC
T ss_pred EEEEccCCHH-HCEEEEEEEEeC---CceEEEEEEEEEecCC
Confidence 7999999999 999999999995 3455555666665443
No 343
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=98.24 E-value=9.1e-06 Score=45.77 Aligned_cols=47 Identities=15% Similarity=0.170 Sum_probs=33.9
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECCCCC-eeeEeeEEEEEECC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAGSGQ-DLHSQVYTVTVLTP 57 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~-~~~~~~~~l~v~~~ 57 (98)
+...+.++|+|.+++.+ |+|.|.|.+....... ........|.|...
T Consensus 77 ~~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~~~~~~~~~~~gt~L~V~~~ 124 (134)
T 3bik_B 77 LPNRHDFHMNILDTRRN-DSGIYLCGAISLHPKAKIEESPGAELVVTER 124 (134)
T ss_dssp CTTSSEEEEEECSCCGG-GCEEEEEEEEECSSSCEEEECCCEEEEEECC
T ss_pred cCCCCEEEEEECCCChH-HCEEEEEEEEeCCCCceEEEcCCEEEEEeCC
Confidence 45677899999999999 9999999998742211 12234567777643
No 344
>2pnd_A V-SET and immunoglobulin domain containing 4; complement receptor, IG-like domain, immune system; 1.00A {Mus musculus} PDB: 2icc_A 2ice_S* 2icf_S*
Probab=98.24 E-value=2.9e-06 Score=46.66 Aligned_cols=43 Identities=16% Similarity=0.359 Sum_probs=30.4
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEEC--CCCCeeeEeeEEEEEE
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAA--GSGQDLHSQVYTVTVL 55 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~--~~~~~~~~~~~~l~v~ 55 (98)
..++++|+|++++.+ |+|.|.|.+... .+........+.|.|.
T Consensus 74 ~~~~~sL~I~~v~~~-D~G~Y~C~v~~~~~~~~~~~~~~~~~L~V~ 118 (119)
T 2pnd_A 74 VPGDVSLQINTLQMD-DRNHYTCEVTWQTPDGNQVIRDKIIELRVR 118 (119)
T ss_dssp STTBCCEEESSCCGG-GCEEEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred CCCCEEEEEccCCcc-cCEEEEEEEEECcCCCCeEEEEEEEEEEEc
Confidence 356789999999999 999999999762 1112344455566653
No 345
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.23 E-value=2.1e-06 Score=46.13 Aligned_cols=46 Identities=26% Similarity=0.397 Sum_probs=33.1
Q ss_pred eEEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC
Q psy5866 5 EIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP 58 (98)
Q Consensus 5 ~~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~ 58 (98)
.++.+......+.|.|.+++.+ |+|.|+|.+.+ ....+.|.|..+|
T Consensus 51 ~~~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~a~n-------~~~~~~l~V~~~p 96 (108)
T 2dm7_A 51 GRYSLKQDGTRCELQIHDLSVA-DAGEYSCMCGQ-------ERTSATLTVRALP 96 (108)
T ss_dssp SSCEEEEETTEEEEEESSCCTT-TCSEEEEEETT-------EEEEEECEEECCC
T ss_pred CCEEEEecCCEEEEEECCCCcc-cCEEEEEEEcC-------CEEEEEEEEecCC
Confidence 3444444556778999999999 99999999943 2445677777544
No 346
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=98.22 E-value=3.1e-06 Score=45.71 Aligned_cols=25 Identities=20% Similarity=0.535 Sum_probs=22.5
Q ss_pred eEEEEEccceeeccCeEEEEEEEECC
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAG 40 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~ 40 (98)
+++|+|.+++.+ |+|.|.|.+.+..
T Consensus 68 ~~sL~I~~v~~~-D~G~Y~C~v~~~~ 92 (110)
T 1ncn_A 68 SWTLRLHNLQIK-DKGLYQCIIHHKK 92 (110)
T ss_dssp TTEEEECSCCGG-GCEEEEEEEEEEC
T ss_pred CEEEEEcCCChH-HCEEEEEEEEcCC
Confidence 478999999999 9999999998853
No 347
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.21 E-value=5.1e-06 Score=47.03 Aligned_cols=55 Identities=18% Similarity=0.250 Sum_probs=35.6
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p 61 (98)
||........++|+|.+++.+ |+|.|.|.+.+.............|.|...|...
T Consensus 70 rf~~~~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~~~~~~~fg~GT~L~V~~~p~~~ 124 (134)
T 3kg5_A 70 RMEESQNESLATLTIQGIRFE-DNGIYFCQQKCNNTSEVYQGCGTELRVMGFSTLA 124 (134)
T ss_dssp TEEEEECSSEEEEEECSCCTT-TCEEEEEEEECTTTCCEEECCCEEEEEECC----
T ss_pred eEEEEccCCEEEEEECCCCcC-cCEEEEEEEEcCCCCceEECCCEEEEEecCCCHH
Confidence 444444667899999999999 9999999998742112233334567776555443
No 348
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.21 E-value=3.2e-06 Score=44.60 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=27.3
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTV 54 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v 54 (98)
+|.|.+++.+ |+|.|+|.+.|. ....+..+.|.|
T Consensus 63 ~L~i~~v~~~-D~G~Y~C~a~n~---~g~~~~~~~l~V 96 (98)
T 1gl4_B 63 ILTIRNVQPS-DAGTYVCTGSNM---FAMDQGTATLHV 96 (98)
T ss_dssp EEEECSCCGG-GCEEEEEEEECS---SCEEEEEEEEEE
T ss_pred EEEEeCCChh-hCEEEEEEecCC---CCccccEEEEEE
Confidence 6999999999 999999999985 344555566665
No 349
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.20 E-value=7.2e-07 Score=47.55 Aligned_cols=44 Identities=20% Similarity=0.244 Sum_probs=31.6
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP 57 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~ 57 (98)
++.+....+...|.|.++..+ |+|.|+|.+.+ ....+.|.|..+
T Consensus 57 ~~~~~~~~~~~~L~I~~~~~~-D~G~Y~C~a~n-------~~~~~~l~V~~~ 100 (101)
T 2edk_A 57 RYRFKKDGKRHILIFSDVVQE-DRGRYQVITNG-------GQCEAELIVEEK 100 (101)
T ss_dssp CCEEEECSSEEEEECSSCCGG-GCSBEEEECSS-------CEECCBEEEECC
T ss_pred eEEEEECCCEEEEEECCCChh-hCEEEEEEEcC-------CcEEEEEEEeCC
Confidence 444555566778999999999 99999998875 123445666544
No 350
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.20 E-value=6.9e-07 Score=48.02 Aligned_cols=44 Identities=18% Similarity=0.130 Sum_probs=31.2
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
++.+....+...|.|.+++.+ |+|.|+|.+.+. ..+..+.|.|.
T Consensus 53 ~~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~a~n~-----~~~~~~~l~V~ 96 (106)
T 2dlt_A 53 RITISHVGRFHKLVIDDVRPE-DEGDYTFVPDGY-----ALSLSAKLNFL 96 (106)
T ss_dssp SCEEEEETTEEEEEESSCCTT-TCSCEEEEEETS-----CCCCCBCEEEE
T ss_pred CEEEEEeCCEEEEEECCCCcC-CCEEEEEEEccC-----CceEEEEEEEE
Confidence 333444455678999999999 999999999873 23334556654
No 351
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=98.20 E-value=4.6e-06 Score=44.04 Aligned_cols=35 Identities=20% Similarity=0.484 Sum_probs=28.2
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTV 54 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v 54 (98)
.+|.|.+++.. |+|.|+|.+.|. .+.....+.|.|
T Consensus 65 ~~L~i~~v~~~-D~G~Y~C~a~N~---~g~~~~~~~l~V 99 (100)
T 3caf_A 65 WSLIMESVVPS-DKGNYTCVVENE---YGSINHTYHLDV 99 (100)
T ss_dssp TEEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEE
T ss_pred EEEEEccCCcC-CCEEEEEEEEeC---CCEEEEEEEEEE
Confidence 47999999999 999999999995 455555566665
No 352
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.20 E-value=1.6e-06 Score=45.93 Aligned_cols=37 Identities=22% Similarity=0.317 Sum_probs=29.4
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP 57 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~ 57 (98)
+|.|.+++.+ |+|.|+|.+.|. ....+..+.|.|..+
T Consensus 63 ~L~i~~v~~~-d~G~Y~C~a~n~---~g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 63 TLQIKNLRIS-DTGTYTCVATSS---SGETSWSAVLDVTES 99 (100)
T ss_dssp CEEEESCCTT-TCCEEEEEEECS---SCCCBCCEEEEEESC
T ss_pred EEEEccCCcc-cCEEEEEEEEcC---CCCEEEEEEEEEecC
Confidence 6999999999 999999999986 334455677777643
No 353
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.19 E-value=6.4e-06 Score=48.59 Aligned_cols=40 Identities=23% Similarity=0.287 Sum_probs=32.9
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT 56 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~ 56 (98)
.+...|.|.+++.+ |+|.|+|.+.|. .+..+..+.|.|..
T Consensus 171 ~~~~~L~i~~~~~~-d~G~Y~C~a~N~---~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 171 GRTAYFTINGVSTA-DSGKYGLVVKNK---YGSETSDFTVSVFI 210 (212)
T ss_dssp TTEEEEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEEC
T ss_pred CCEEEEEEcCcchH-HCeEEEEEEEcC---CCcEEEEEEEEEEc
Confidence 45678999999999 999999999995 45666677787764
No 354
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.18 E-value=4.9e-06 Score=49.68 Aligned_cols=40 Identities=20% Similarity=0.260 Sum_probs=31.8
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP 58 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~ 58 (98)
..+|+|.+++.+ |+|.|+|.+.+. .+..+..+.|.|..+|
T Consensus 170 ~~~L~I~~v~~~-D~G~Y~C~a~N~---~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 170 LSTLTIDGVTRS-DQGLYTCAASSG---LMTKKNSTFVRVHEDP 209 (213)
T ss_dssp EEEEEESSCCGG-GCEEEEEEEECS---SCEEEEEEEEEEEC--
T ss_pred eEEEEECCCCcc-cCEEEEEEEecC---CCcEEEEEEEEEeccc
Confidence 456999999999 999999999985 4556777888887544
No 355
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.17 E-value=3.3e-06 Score=51.72 Aligned_cols=42 Identities=10% Similarity=0.202 Sum_probs=32.9
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP 58 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~ 58 (98)
.+..+|.|.+++.+ |+|.|+|.+.+. .......+.|.|...+
T Consensus 198 ~~~~~L~i~~v~~~-D~G~Y~C~a~n~---~g~~~~~~~l~V~~~~ 239 (268)
T 3mj6_A 198 RNDGSIKLQTVKES-DQGIYTCSIYVG---KLESRKTIVLHVVQDE 239 (268)
T ss_dssp GTBCCEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEECC-
T ss_pred CCeEEEEECcCChh-hCeEEEEEEEcC---CceEEEEEEEEEEcCC
Confidence 34568999999999 999999999984 5566677788885443
No 356
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=98.17 E-value=1.2e-05 Score=44.09 Aligned_cols=45 Identities=16% Similarity=0.175 Sum_probs=31.8
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECCCCC-eeeEeeEEEEEE
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAGSGQ-DLHSQVYTVTVL 55 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~-~~~~~~~~l~v~ 55 (98)
+...+.++|+|.+++.+ |+|.|.|.+....... ........|.|.
T Consensus 67 ~~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~~~~~~~~~~~~t~L~V~ 112 (117)
T 3bp6_A 67 LPNRHDFHMNILDTRRN-DSGIYLCGAISLHPKLKIEESPGAELVVT 112 (117)
T ss_dssp CTTSSEEEEEESSCCGG-GCEEEEEEEEECSSSCEEEECCCEEEEEC
T ss_pred cCCCCEEEEEECcCCHH-HCEEEEEEEEecCCccccccCCcEEEEEE
Confidence 45778899999999999 9999999998742211 122334555553
No 357
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.17 E-value=2.8e-06 Score=45.81 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=27.1
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 61 r~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~n~ 93 (108)
T 1jhl_L 61 RFSGSGSGTDFTLTISSLEPE-DFAMYICQQHNE 93 (108)
T ss_dssp TEEEEESSSEEEEEECSCCTT-CCSEEEEEECSS
T ss_pred eEEEEecCCEEEEEECCCCHH-HCEEEEEEEccC
Confidence 444444566789999999999 999999999874
No 358
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.16 E-value=6.4e-06 Score=43.32 Aligned_cols=35 Identities=14% Similarity=0.358 Sum_probs=27.6
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTV 54 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v 54 (98)
..|.|.+++.+ |+|.|+|.+.+. .+..+..+.|.|
T Consensus 60 ~~L~i~~~~~~-D~G~Y~C~a~n~---~g~~~~~~~l~V 94 (95)
T 2ckn_A 60 EEVEVRDSIPA-DSGLYACVTSSP---SGSDTTYFSVNV 94 (95)
T ss_dssp SEEEESSCCGG-GSEEEEEEEEET---TEEEEEEEEEEE
T ss_pred CEEEECCCChH-HCEEEEEEeccC---CCcEEEEEEEEE
Confidence 36999999999 999999999985 445555555554
No 359
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.16 E-value=1.5e-06 Score=48.99 Aligned_cols=52 Identities=27% Similarity=0.333 Sum_probs=32.8
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCC-CeeeEeeEEEEEECCC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSG-QDLHSQVYTVTVLTPP 58 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~-~~~~~~~~~l~v~~~~ 58 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+..+. .........|.|...|
T Consensus 67 r~~~~~~~~~~~L~I~~~~~~-DsG~Y~C~a~n~~g~~~~~~g~gt~L~V~~~p 119 (133)
T 3khq_A 67 RIVQTQNGSVYTLTIQNIQYE-DNGIYFCKQKCDSANHNVTDSCGTELLVLGFS 119 (133)
T ss_dssp TEEEEEETTEEEEEECSCCGG-GCEEEEEEESSCC-------CCCEEEEEC---
T ss_pred CEEEEcCCCEEEEEECCCChH-HCEEEEEEEEeCCCCcceeECCCEEEEEEecc
Confidence 444444456789999999999 999999999874210 1123344677776433
No 360
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.16 E-value=2.3e-06 Score=45.56 Aligned_cols=48 Identities=21% Similarity=0.448 Sum_probs=33.9
Q ss_pred eeEEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC
Q psy5866 4 VEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ 59 (98)
Q Consensus 4 ~~~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~ 59 (98)
+.++.+.......+|.|.+++.+ |+|.|+|.+. . ....+.|.|..+|.
T Consensus 51 ~~~~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~g-----~--~~~~~~l~V~~~p~ 98 (103)
T 2e7b_A 51 GDKYSLRQEGAMLELVVRNLRPQ-DSGRYSCSFG-----D--QTTSATLTVTALPS 98 (103)
T ss_dssp SSSEEEEECSSEEEEEECSCCTT-TCCCEEEECS-----S--CBCCBCEEEECCCC
T ss_pred CCcEEEEEcCCEEEEEEccCCcc-cCEEEEEEEC-----C--cEEEEEEEEEeccc
Confidence 34555556667788999999999 9999999822 1 23345677765554
No 361
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=98.15 E-value=4e-06 Score=46.15 Aligned_cols=48 Identities=21% Similarity=0.160 Sum_probs=33.0
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT 56 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~ 56 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+.. .........|.|..
T Consensus 63 R~~~~~~~~~~~L~I~~~~~~-DsG~Y~C~~~~~~--~~~fg~gt~L~V~~ 110 (120)
T 1oaq_L 63 RFSGSLIGNKAALTITGAQTE-DEAIYFCALWYSN--HLVFGGGTKLTVLG 110 (120)
T ss_dssp TEEEEEETTEEEEEEESCCGG-GCEEEEEEEEETT--EEEECCCEEEEECC
T ss_pred ceEEecCCCeEEEEECCCChh-hCeEEEEEEccCC--CcEECCCEEEEEcC
Confidence 444444566889999999999 9999999998741 12222334666653
No 362
>1qfo_A Protein (sialoadhesin); immunoglobulin superfamily, carbohydrate binding, immune system; HET: SIA GAL GLC; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1od7_A* 1oda_A* 1od9_A* 1qfp_A 2bve_A* 1url_A*
Probab=98.14 E-value=1.7e-06 Score=47.47 Aligned_cols=33 Identities=18% Similarity=0.353 Sum_probs=26.5
Q ss_pred EEEEe--CCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 6 IIDYR--PDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 6 ~~~~~--~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
|+.+. ...++++|+|.+++.+ |+|.|.|.+...
T Consensus 67 R~~~~~~~~~~~~sL~I~~v~~~-Dsg~Y~C~v~~~ 101 (119)
T 1qfo_A 67 RAELMGNMDHKVCNLLLKDLKPE-DSGTYNFRFEIS 101 (119)
T ss_dssp TEEECSCGGGTBCCEEECSCCGG-GCEEEEEEEECC
T ss_pred eEEEeCCCCCCEEEEEEccCCcc-cCceEEEEEEeC
Confidence 45443 3367789999999999 999999999863
No 363
>1mqk_H Antibody 7E2 FV fragment, heavy chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_C 3ehb_C* 3hb3_C* 1qle_H* 2otu_B 2gsg_B 2otw_B 1qfw_I* 3ab0_B 1i8k_B 1i8i_B 1vhp_A 1bfv_H* 1cfv_H* 2bfv_H* 1dsf_H
Probab=98.14 E-value=9.3e-06 Score=45.19 Aligned_cols=28 Identities=18% Similarity=0.194 Sum_probs=24.6
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
...+.++|+|.+++.+ |+|.|.|.+...
T Consensus 74 ~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~ 101 (127)
T 1mqk_H 74 NAKNTLYLQMSSLKSE-DTAMYYCVRHEY 101 (127)
T ss_dssp GGGTEEEEEECSCCGG-GCEEEEEEEEET
T ss_pred CCCCEEEEEECCCCHH-HCEEEEEEEecC
Confidence 3467899999999999 999999999873
No 364
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.14 E-value=9.2e-06 Score=47.19 Aligned_cols=42 Identities=19% Similarity=0.298 Sum_probs=33.7
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCC
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQP 60 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~ 60 (98)
...|.|.+++.+ |+|.|+|.+.+. ....+..+.|.|...|..
T Consensus 142 ~~~L~i~~v~~~-d~G~Y~C~a~n~---~~~~~~~~~l~V~~~p~~ 183 (184)
T 2ny1_B 142 GKTLSVSQLELQ-DSGTWTCTVLQN---QKKVEFKIDIVVLAFQKA 183 (184)
T ss_dssp SSEEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEECCCC-
T ss_pred ceEEEEecCCcC-CCeEEEEEEEEC---CceEEEEEEEEEEecCCC
Confidence 346999999999 999999999984 566677788888766653
No 365
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.14 E-value=6.3e-06 Score=44.57 Aligned_cols=33 Identities=24% Similarity=0.250 Sum_probs=27.6
Q ss_pred EEEEe--CCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 6 IIDYR--PDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 6 ~~~~~--~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
|+.+. ...+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 60 R~~~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~ 94 (109)
T 1pew_A 60 RFAGSIDRSSNSASLTISGLKTE-DEADYYCQSYDA 94 (109)
T ss_dssp TEEEEEETTTTEEEEEECSCCGG-GCEEEEEEEEET
T ss_pred cEEEEeccCCCEEEEEECCCChh-hCEEEEEEEEeC
Confidence 44443 6777899999999999 999999999873
No 366
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.13 E-value=3.1e-06 Score=44.67 Aligned_cols=38 Identities=34% Similarity=0.359 Sum_probs=28.5
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTV 54 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v 54 (98)
.+...|.|.++..+ |+|.|+|.+.|. .+..+..+.|.|
T Consensus 61 ~~~~~L~i~~v~~~-D~G~Y~C~a~N~---~g~~~~~~~l~V 98 (99)
T 2yr3_A 61 AGVAELHIQDALPE-DHGTYTCLAENA---LGQVSCSAWVTV 98 (99)
T ss_dssp TTEEEEEECSCCTT-CCBCEEEEEECS---SCEEEEECCEEE
T ss_pred CCeEEEEECCCChh-hCEEEEEEEEEC---CCeEEEEEEEEE
Confidence 34568999999999 999999999985 334444445544
No 367
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=98.13 E-value=7.3e-06 Score=44.46 Aligned_cols=34 Identities=18% Similarity=0.344 Sum_probs=28.1
Q ss_pred eEEEEeCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 5 EIIDYRPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 5 ~~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
.|+......+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 65 ~R~~~~~~~~~~~L~I~~~~~~-DsG~Y~C~~~~~ 98 (111)
T 2qhl_A 65 SRFSMTVNDQKFDLNIIGTRED-DGGEYFCGEVEG 98 (111)
T ss_dssp TTEEEEESSSBEEEEESSCCGG-GCEEEEEEEEET
T ss_pred CcEEEEEcCCeEEEEECCCChh-HCEEEEEEEccC
Confidence 3555555567889999999999 999999999873
No 368
>1jtp_A Single-domain antibody; immunoglobulin, heavy chain antibody, VHH, interface, binding, antibody, hydrolase; 1.90A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 1jto_A 1mel_A 2x89_A
Probab=98.12 E-value=1.6e-05 Score=45.52 Aligned_cols=27 Identities=15% Similarity=0.278 Sum_probs=24.5
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
...+.++|+|.+++.+ |+|.|.|.+..
T Consensus 74 ~~~~~~sL~I~~~~~~-Dsg~Y~C~~~~ 100 (148)
T 1jtp_A 74 NAKNTVYLLMNSLEPE-DTAIYYCAADS 100 (148)
T ss_dssp CTTSEEEEEECSCCGG-GCEEEEEEEEC
T ss_pred CCCCEEEEEECcCChh-HCEEEEEEEEc
Confidence 4577899999999999 99999999986
No 369
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.12 E-value=3.3e-06 Score=44.46 Aligned_cols=29 Identities=14% Similarity=0.242 Sum_probs=23.4
Q ss_pred EEEeCCCCeEEEEEccceeeccCeEEEEEE
Q psy5866 7 IDYRPDSGRYDLIISNASFERDNGKFECRL 36 (98)
Q Consensus 7 ~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~ 36 (98)
+.+....+..+|.|.+++.+ |+|.|+|.+
T Consensus 54 ~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~a 82 (95)
T 2k1m_A 54 YGLATEGTRHTLTVREVGPA-DQGSYAVIA 82 (95)
T ss_dssp CEEEEETTEEEEEESSCCTT-CCSEEEEEE
T ss_pred EEEEEcCCEEEEEEcCCCcc-cCEEEEEEE
Confidence 33334455678999999999 999999999
No 370
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.12 E-value=4.4e-06 Score=44.39 Aligned_cols=45 Identities=11% Similarity=0.251 Sum_probs=31.5
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP 58 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~ 58 (98)
++.+........|.|.+++.+ |+|.|+|.+.+ ....+.|.|..++
T Consensus 56 ~~~~~~~~~~~~L~I~~~~~~-D~G~Y~C~a~~-------~~~~~~l~V~~p~ 100 (102)
T 2eo1_A 56 KVRVEAVGCTRRLVVQQAGQA-EAGEYSCEAGG-------QQLSFRLQVAGQC 100 (102)
T ss_dssp SEEEEEETTEEEEEETTCCTT-TCSCEEEEETT-------EECCEEEEEESCC
T ss_pred CEEEEEcCCEEEEEECCCCcc-cCEEEEEEcCC-------CcEEEEEEEeCCC
Confidence 333444445678999999999 99999998853 1234677776543
No 371
>1mfa_H IGG1-lambda Se155-4 FAB (heavy chain); immunoglobulin; HET: GLA MMA; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy2_B
Probab=98.12 E-value=1e-05 Score=44.45 Aligned_cols=29 Identities=14% Similarity=0.179 Sum_probs=25.5
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 73 ~~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~ 101 (120)
T 1mfa_H 73 VTSTTTAYMELSSLTSE-DSAVYYCTRGGH 101 (120)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEEEET
T ss_pred eCCCCEEEEEECCCCHH-HCEEEEEEEecC
Confidence 35577899999999999 999999999873
No 372
>1smo_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immune system receptor, system; HET: TLA; 1.47A {Homo sapiens} SCOP: b.1.1.1
Probab=98.11 E-value=7.9e-06 Score=45.22 Aligned_cols=29 Identities=24% Similarity=0.464 Sum_probs=25.6
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
+...+.++|+|.+++.+ |+|.|.|.+...
T Consensus 70 ~~~~~~~~LtI~~l~~~-Dsg~Y~C~~~~~ 98 (119)
T 1smo_A 70 YHDHGLLRVRMVNLQVE-DSGLYQCVIYQP 98 (119)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEECCT
T ss_pred eCCCCEEEEEECCCCHH-HCEEEEEEEEcC
Confidence 45678999999999999 999999998763
No 373
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.11 E-value=9.8e-06 Score=48.26 Aligned_cols=44 Identities=25% Similarity=0.304 Sum_probs=33.8
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPK 62 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~ 62 (98)
...|.|.+++.. |+|.|+|.+.+. ....+..+.|.|..+|.+|.
T Consensus 184 ~~~L~i~~~~~~-d~G~Y~C~a~n~---~g~~~~~~~l~V~~~p~~p~ 227 (231)
T 3ojm_B 184 AEVLALFNVTEA-DAGEYICKVSNY---IGQANQSAWLTVLPKQQAPG 227 (231)
T ss_dssp TTEEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEECCC----
T ss_pred ccEEEEecCCHH-HCeEEEEEEEec---cceEeeEEEEEEecCCCCCc
Confidence 346999999999 999999999995 45667778888887776653
No 374
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.11 E-value=6.2e-06 Score=45.85 Aligned_cols=41 Identities=15% Similarity=0.279 Sum_probs=29.3
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCC--eeeEeeEEEEEE
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQ--DLHSQVYTVTVL 55 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~--~~~~~~~~l~v~ 55 (98)
+.++|+|.+++.+ |+|.|.|.+.+..... ......+.|.|.
T Consensus 90 ~~~sL~I~~v~~~-D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~ 132 (135)
T 1xt5_A 90 AAPTLRLTHVHPQ-DGGRYWCQVAQWSIRTEFGLDAKSVVLKVT 132 (135)
T ss_dssp TSCCEEECSCCGG-GCEEEEEEEECSSCCSGGGEEEEEEEEEEE
T ss_pred CCCeEEECCCChh-hCcEEEEEEEcCCccccccccceeEEEEEe
Confidence 4578999999999 9999999999853211 233345566654
No 375
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.10 E-value=4.2e-06 Score=51.44 Aligned_cols=69 Identities=9% Similarity=0.140 Sum_probs=32.8
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCS 82 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~ 82 (98)
.....|.|.+++.+ |+|.|+|.+.+........+..+.|.|..++..|.+..........+..+.|...
T Consensus 149 ~~~~~l~I~~v~~~-d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~~~P~l~~~~~~~~~~~~~~~~~~~ 217 (242)
T 1p6f_A 149 KVQAEFPLGPVTTA-HRGTYRCFGSYNNHAWSFPSEPVKLLVTGDIENTSLAPEDPTFPADTWGTYLLTT 217 (242)
T ss_dssp SSEEEEEEEECCGG-GCEEEEEEEEEETTEECCCCCCEEEEEEC--------------------------
T ss_pred CceEEEEeCCCccc-cCEEEEEEEECCCCcccCCCCCEEEEEeccCCCCcccCcCCCccccccccccccc
Confidence 45678999999999 9999999998853111234566888888777777774433323333444444443
No 376
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=98.09 E-value=3.5e-06 Score=46.53 Aligned_cols=48 Identities=13% Similarity=0.112 Sum_probs=32.4
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+... .........|.|.
T Consensus 61 R~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~~~-~~~fg~gt~L~V~ 108 (120)
T 1mqk_L 61 RFSGSGSGTQFSLKINSLLPE-DFGSYYCQHHYGTP-PLTFGGGTKLEIK 108 (120)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSSSS-SCCBCCCEEEEEC
T ss_pred eEEEeccCCEEEEEECCCCHH-HCEEEEEEEEeCCC-ceEECCCeEEEEe
Confidence 444444556789999999999 99999999987420 1122233466664
No 377
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.09 E-value=6.7e-06 Score=49.48 Aligned_cols=44 Identities=20% Similarity=0.359 Sum_probs=30.8
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCC
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p 61 (98)
+...|.|.+++.+ |+|.|+|.+.|. .+..+..+.|.|..+|..+
T Consensus 180 ~~~~L~i~~~~~~-d~G~Y~C~a~N~---~g~~~~~~~l~V~~~p~~~ 223 (241)
T 3grw_A 180 ADVRLRLANVSER-DGGEYLCRATNF---IGVAEKAFWLSVHGPRAAE 223 (241)
T ss_dssp EEEEEEECSCCGG-GCEEEEEEEECS---SCEEEEEEEEEC-------
T ss_pred CceEEEECcCCcc-cCcEEEEEEecC---cceEEEEEEEEecCCCCCC
Confidence 4567999999999 999999999985 4555667788887666554
No 378
>1xed_A Polymeric-immunoglobulin receptor; IG-like fold, immune system; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.08 E-value=1.2e-05 Score=44.21 Aligned_cols=29 Identities=28% Similarity=0.644 Sum_probs=25.7
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
+...+.++|+|.+++.+ |+|.|.|.+...
T Consensus 69 ~~~~~~~sL~I~~l~~~-DsG~Y~C~v~~~ 97 (117)
T 1xed_A 69 FPENGTFVVNIAQLSQD-DSGRYKCGLGIN 97 (117)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEESCG
T ss_pred cCCCCEEEEEECCCChH-HCEEEEEEEEeC
Confidence 46778899999999999 999999998763
No 379
>1dlf_H Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 2dlf_H 1wz1_H* 3iy5_B 2uud_H*
Probab=98.08 E-value=1.4e-05 Score=44.19 Aligned_cols=29 Identities=21% Similarity=0.206 Sum_probs=25.2
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
+...+.++|+|.+++.+ |+|.|.|.+...
T Consensus 75 ~~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~ 103 (124)
T 1dlf_H 75 DDSKRRVYLQMNTLRAE-DTGIYYCTGIYY 103 (124)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEEEBT
T ss_pred cCCCCEEEEEECCCCHH-HCEEEEEEEEeC
Confidence 34577899999999999 999999999863
No 380
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.08 E-value=1.7e-05 Score=43.57 Aligned_cols=47 Identities=11% Similarity=0.051 Sum_probs=35.1
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ 59 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~ 59 (98)
++.+.......+|+|.++..+ |+|.|+|.... . ...++.|.|..+|.
T Consensus 62 r~~i~~~g~~~~L~I~~v~~~-D~G~Y~~~~~~----~--~~ssA~L~V~~~p~ 108 (112)
T 2e6q_A 62 RYRIEQKGLQHRLILHAVKHQ-DSGALVGFSCP----G--VQDSAALTIQESSG 108 (112)
T ss_dssp EEEECCBTTEEEEEEESCCST-TCSEEEEEEET----T--EEEEEEEEEECSSC
T ss_pred EEEEEeCCcEEEEEECCCCHH-HCccEEEEEEC----C--eeEEEEEEEeCCCc
Confidence 666666666789999999999 99999875543 1 23467888886654
No 381
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.07 E-value=1.2e-05 Score=46.85 Aligned_cols=43 Identities=19% Similarity=0.302 Sum_probs=31.7
Q ss_pred EEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEE
Q psy5866 8 DYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTV 54 (98)
Q Consensus 8 ~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v 54 (98)
......+..+|.|.+++.+ |+|.|+|.+.|. .+..+..+.|.|
T Consensus 151 ~~~~~~~~~~L~i~~~~~~-d~G~Y~C~a~n~---~g~~~~~~~l~V 193 (194)
T 2a38_A 151 QISQEGDLYSLLIAEAYPE-DSGTYSVNATNS---VGRATSTAELLV 193 (194)
T ss_dssp EEEEETTEEEEEEEEECGG-GCEEEEEEEEET---TEEEEEEEEEEE
T ss_pred EEEEcCCEEEEEECCCChh-cCeEEEEEEEeC---CCceEEEEEEEE
Confidence 3333345568999999999 999999999995 455555566655
No 382
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.07 E-value=1.8e-06 Score=54.76 Aligned_cols=78 Identities=21% Similarity=0.310 Sum_probs=23.7
Q ss_pred EEEEEccceeeccCeEEEEEEEECCC--CC---eeeEeeEEEEEECCCCC-CEEeCCCCceecCCCcEEEEEEcCCCCCC
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGS--GQ---DLHSQVYTVTVLTPPQP-PKISPGANPVATEGRAIELVCSTSGGSPD 89 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~--~~---~~~~~~~~l~v~~~~~~-p~i~~~~~~~~~~g~~~~l~C~~~~~~p~ 89 (98)
..+.+...+.+ |.+.|.|+|.+... +. ...+....|.|+.+|.. +.+.. + ..+.+|+.++|+|.+.+..|+
T Consensus 142 ~~l~~~~~~~D-~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~-p-~~l~eG~~v~l~C~~~g~~P~ 218 (291)
T 1mq8_A 142 VTTTVLVRRDH-HGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS-P-RVLEVDTQGTVVCSLDGLFPV 218 (291)
T ss_dssp EEEECCCSSSC-SSCEEEEEEEEECGGGTSCEEEECCCCEECBC------------------------------------
T ss_pred EEEEeeeeecc-CCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecC-C-cCccCCCeEEEEEEcCCCCCC
Confidence 34556555555 66799999998522 11 12345567888777543 44432 2 367899999999998744454
Q ss_pred C--eEEEEe
Q psy5866 90 P--QISVTL 96 (98)
Q Consensus 90 ~--~~~W~~ 96 (98)
+ .++|++
T Consensus 219 ~~~~v~w~~ 227 (291)
T 1mq8_A 219 SEAQVHLAL 227 (291)
T ss_dssp ---------
T ss_pred cccEEEEEE
Confidence 3 588875
No 383
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.07 E-value=9.3e-06 Score=44.09 Aligned_cols=28 Identities=29% Similarity=0.557 Sum_probs=25.1
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+
T Consensus 60 ~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~ 87 (111)
T 2ywz_A 60 DKGSKSFSLRISDLRVE-DSGTYKCQADY 87 (111)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEEEE
T ss_pred eCCCCEEEEEECCCChh-cCEEEEEEEEc
Confidence 44567899999999999 99999999987
No 384
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=98.06 E-value=1.2e-05 Score=44.66 Aligned_cols=33 Identities=18% Similarity=0.139 Sum_probs=27.2
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
||......+.++|+|.+++.+ |+|.|.|.+...
T Consensus 62 Rfs~~~~~~~~sL~I~~l~~~-DsG~Y~C~~~~~ 94 (123)
T 3t0v_A 62 RFSGSKSGTSASLAISGLRSE-DEADYYCLSWDD 94 (123)
T ss_dssp TEEEEEETTEEEEEECSCCGG-GCEEEEEEEEET
T ss_pred CEEEEccCCEEEEEECCCCHH-HCEEEEEEEEcC
Confidence 444444567899999999999 999999999874
No 385
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.06 E-value=1e-05 Score=43.08 Aligned_cols=36 Identities=19% Similarity=0.283 Sum_probs=27.8
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCee-eEeeEEEEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDL-HSQVYTVTV 54 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~-~~~~~~l~v 54 (98)
..+|.|.+++.. |+|.|+|.+.+. .+. .+..+.|.|
T Consensus 75 ~~~L~I~~v~~~-D~G~Y~C~a~n~---~g~~~s~~~~l~V 111 (112)
T 3so5_A 75 TTILRLRNVEFT-SEGXYQCVISNH---FGSSYSVXAXLTI 111 (112)
T ss_dssp EEEEEECSCCGG-GCEEEEEEEEET---TEEEECCCEEEEE
T ss_pred ceEEEEeccccc-cCCeEEEEEEeC---CCcEEEeEEEEEe
Confidence 468999999999 999999999985 333 345556655
No 386
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.05 E-value=5.3e-06 Score=44.87 Aligned_cols=33 Identities=15% Similarity=0.192 Sum_probs=26.6
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 63 R~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~ 95 (109)
T 2q20_A 63 RFSGSGSGTDFTFTISSLQPE-DIATYYCQQYDN 95 (109)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSS
T ss_pred cEEEeccCCEEEEEECCCChh-hCEEEEEEEeeC
Confidence 444444556789999999999 999999999763
No 387
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=98.05 E-value=2.4e-06 Score=47.71 Aligned_cols=28 Identities=29% Similarity=0.306 Sum_probs=25.2
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
...+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 74 ~~~~~~sL~I~~~~~~-DsG~Y~C~~~~~ 101 (126)
T 2h32_A 74 VARNRGYLSISELQPE-DEAMYYCAMGAR 101 (126)
T ss_dssp GGGTEEEEEECSCCGG-GCEEEEEEEECS
T ss_pred CCCCeEEEEECCCChh-HCEEEEEEEEcC
Confidence 5677899999999999 999999999874
No 388
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.05 E-value=5.9e-06 Score=45.92 Aligned_cols=47 Identities=9% Similarity=0.139 Sum_probs=33.1
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+.. .........|.|.
T Consensus 65 r~~~~~~~~~~sL~I~~v~~~-DsG~Y~C~~~~~~--~~~fg~gT~L~V~ 111 (126)
T 4ffy_L 65 RFSGSGSETDFTLTIDSVETD-DAATYYCQQNNED--PYTFGGGTKLEIK 111 (126)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSSS--SCEECCCEEEEEE
T ss_pred cEEEecCCCEEEEEECCCCHH-HCEEEEEEEecCC--CcEECCCEEEEEe
Confidence 444444567889999999999 9999999998642 1223334566665
No 389
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.05 E-value=5.1e-06 Score=49.60 Aligned_cols=45 Identities=22% Similarity=0.406 Sum_probs=31.1
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKI 63 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i 63 (98)
..|.|.+++.+ |+|.|+|.+.+.. ....+..+.|.|..++..|.+
T Consensus 137 ~~L~i~~v~~~-D~G~Y~C~a~n~~--~~~~s~~~~l~V~~~~~~P~i 181 (204)
T 3sgj_C 137 SDFYIPKATLK-DSGSYFCRGLVGS--KNVSSETVQITITQGLAVSTI 181 (204)
T ss_dssp CCEEESSCCGG-GCEEEEEEEEETT--EEEECCCEEEEEEC-------
T ss_pred ceEEECcCCcc-cCEEEEEEEEeCC--CceecCcEEEEEeCcCCCCcc
Confidence 36999999999 9999999999941 345666788888877766655
No 390
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=98.04 E-value=1.1e-05 Score=43.54 Aligned_cols=28 Identities=25% Similarity=0.484 Sum_probs=24.9
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+
T Consensus 60 ~~~~~~~~L~I~~~~~~-DsG~Y~C~~~~ 87 (108)
T 2coq_A 60 DEGSNSASLTIRDLRVE-DSGTYKCKAYR 87 (108)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEEEE
T ss_pred cCCCCEEEEEECCCCcc-cCEEEEEEEEe
Confidence 44567899999999999 99999999987
No 391
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.04 E-value=2.6e-06 Score=46.01 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=27.1
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
|+.+....+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 61 r~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~ 93 (108)
T 1qfw_M 61 RFTGSGSATDFTLTISSVQAE-DFADYHCGQTYN 93 (108)
T ss_dssp TEECCBCSSEEEEEESSCCTT-CCSEEEEEECSS
T ss_pred cEEEEcCCCEEEEEECCCChh-hCEEEEEEEccC
Confidence 455444566889999999999 999999999863
No 392
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=98.03 E-value=1.1e-05 Score=44.06 Aligned_cols=28 Identities=14% Similarity=0.226 Sum_probs=25.0
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+
T Consensus 73 ~~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~ 100 (117)
T 2yc1_A 73 DDAKKTLSLQMNSLRAE-DTAVYYCARGG 100 (117)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEEEE
T ss_pred eCCCCEEEEEECCCCHH-HCEEEEEEEEe
Confidence 34577899999999999 99999999987
No 393
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=98.03 E-value=6.7e-06 Score=44.88 Aligned_cols=27 Identities=22% Similarity=0.443 Sum_probs=24.5
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
...+.++|+|.+++.+ |+|.|.|.+.+
T Consensus 71 ~~~~~~~L~I~~~~~~-DsG~Y~C~~~~ 97 (116)
T 1tvd_A 71 LTQKAFHLVISPVRTE-DSATYYCAFTL 97 (116)
T ss_dssp GGGTEEEEEESSCCGG-GCEEEEEEEEC
T ss_pred cCCCEEEEEEccCChH-HCEEEEEEEeC
Confidence 4667889999999999 99999999986
No 394
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.02 E-value=7.5e-06 Score=44.59 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=26.8
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 67 r~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~ 99 (114)
T 1eeq_A 67 RFSGSGSGTDFTLTISSLQAE-DVAVYYCQQYYS 99 (114)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSS
T ss_pred CEEEeecCCEEEEEECCCCcc-cCEEEEEEEeeC
Confidence 444444566789999999999 999999999863
No 395
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase, immune system; 1.60A {Camelus dromedarius} SCOP: b.1.1.1
Probab=98.02 E-value=1.1e-05 Score=44.52 Aligned_cols=28 Identities=11% Similarity=0.178 Sum_probs=24.9
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
...+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 73 ~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~ 100 (121)
T 1kxv_C 73 NAKNTAYLQMDSLKPD-DTAMYYCKPSLR 100 (121)
T ss_dssp SSTTEEEEEECSCCGG-GCEEEEEEEEES
T ss_pred CCCCEEEEEECCCCHH-HCEEEEEEEEec
Confidence 4567899999999999 999999999874
No 396
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.01 E-value=3.1e-06 Score=45.88 Aligned_cols=33 Identities=15% Similarity=0.267 Sum_probs=26.8
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 65 R~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~ 97 (111)
T 1j05_L 65 RFSGTGSRTDFTLIIDPVEAD-DVATYYCQQTNE 97 (111)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSS
T ss_pred cEEEEccCCEEEEEECCCCcc-cCEEEEEEEecC
Confidence 444444566789999999999 999999999763
No 397
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.00 E-value=1.7e-05 Score=46.28 Aligned_cols=41 Identities=15% Similarity=0.160 Sum_probs=32.2
Q ss_pred CCCCeEEEEEcc-ceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 11 PDSGRYDLIISN-ASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 11 ~~~~~~~l~I~~-v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
...+..+|.|.+ +..+ |+|.|+|.+.|. .+..+..+.|.|.
T Consensus 155 ~~~~~~~L~i~~~~~~~-d~G~Y~C~a~N~---~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 155 VTRSFTSLVFPNGVERK-DAGFYVVCAKNR---FGIDQKTVELDVA 196 (197)
T ss_dssp ECSSEEEEECTTCCCGG-GCEEEEEEEEET---TEEEEEEEEEEEE
T ss_pred EcCCceEEEEeCCCCcc-cCEeEEEEEEeC---CCcEeEEEEEEEe
Confidence 334567899999 9999 999999999995 4556666777664
No 398
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.00 E-value=7.7e-06 Score=44.45 Aligned_cols=27 Identities=30% Similarity=0.495 Sum_probs=24.6
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
..+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 67 ~~~~~~L~I~~v~~~-DsG~Y~C~~~n~ 93 (113)
T 1h5b_A 67 RARYSTLHIRDAQLE-DSGTYFCAAEAS 93 (113)
T ss_dssp SSSEEEEEECSCCGG-GCEEEEEEEECS
T ss_pred CCCEEEEEECCCChh-hCEEEEEEEecC
Confidence 567889999999999 999999999874
No 399
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=97.99 E-value=1.9e-05 Score=43.00 Aligned_cols=32 Identities=28% Similarity=0.128 Sum_probs=26.0
Q ss_pred EEEEe--CCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 6 IIDYR--PDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 6 ~~~~~--~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
|+.+. ...+.++|+|.+++.+ |+|.|.|.+..
T Consensus 67 R~~~~~~~~~~~~~L~I~~~~~~-DsG~Y~C~~~~ 100 (115)
T 2atp_B 67 RNIILESSDSRRPFLSIMNVKPE-DSDFYFCATVG 100 (115)
T ss_dssp CCEEEESTTSSSCEEEECSCCGG-GCEEEEEEEEC
T ss_pred cEEEEEeCCCCEEEEEECCCCHH-HCEEEEEeEcc
Confidence 44443 3666789999999999 99999999875
No 400
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=97.99 E-value=2.9e-05 Score=45.23 Aligned_cols=41 Identities=24% Similarity=0.289 Sum_probs=30.5
Q ss_pred CCCCeEEEEEccce-eeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 11 PDSGRYDLIISNAS-FERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 11 ~~~~~~~l~I~~v~-~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
...+...|.|.+++ .+ |+|.|+|.+.|. .+.....+.|.|.
T Consensus 148 ~~~~~~~L~i~~~~~~~-d~G~Y~C~a~N~---~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 148 NKENYTELNIVNLQITE-DPGEYECNATNS---IGSASVSTVLRVR 189 (190)
T ss_dssp ECSSEEEEEECSCCTTT-SCEEEEEEEECS---SCEEEEEEEEEEE
T ss_pred cCCCeeEEEEEeccccC-CCEEEEEEEEec---CCcceeEEEEEEE
Confidence 33445579999999 59 999999999985 3455555666654
No 401
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=97.99 E-value=6.6e-06 Score=44.94 Aligned_cols=33 Identities=21% Similarity=0.215 Sum_probs=27.2
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 66 R~~~~~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~ 98 (115)
T 2otu_A 66 RFSGSSSGADRYLSISNIQPE-DEAIYICGVGDT 98 (115)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEEEEC
T ss_pred CEEEEccCCEEEEEECCCChh-HCEEEEEEEecC
Confidence 455444567789999999999 999999999874
No 402
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=97.98 E-value=3.6e-06 Score=46.48 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=27.0
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 63 R~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~ 95 (119)
T 2e27_L 63 RFSGSGSGRDYSFSISNLEPE-DAATYYCLQYDN 95 (119)
T ss_dssp TEEEEEETTEEEEEECSCCGG-GCEEEEEEECGG
T ss_pred cEEEEccCCEEEEEECCCChH-HCEEEEEEEccC
Confidence 454444566889999999999 999999999863
No 403
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=97.98 E-value=5e-06 Score=44.47 Aligned_cols=30 Identities=20% Similarity=0.591 Sum_probs=26.4
Q ss_pred CCceecCCCcEEEEEEcCCCCCCCeEEEEec
Q psy5866 67 ANPVATEGRAIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 67 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
.+..+.+|+.+.|.|.+. |.|.|.+.|+++
T Consensus 13 ~~~~v~~G~~~~l~C~~~-g~P~p~v~W~k~ 42 (100)
T 3knb_A 13 SDISIDEGKVLTVACAFT-GEPTPEVTWSCG 42 (100)
T ss_dssp SEEEEETTSEEEEEEEEE-EESCCEEEEEET
T ss_pred CcEEEeCCCeEEEEEEEE-EecCCEEEEEEC
Confidence 456889999999999985 899999999975
No 404
>1yc7_A Anti-VSG immunoglobulin heavy chain variable domain caban33; antibody, camel antibody, immune system; 1.60A {Camelus dromedarius} PDB: 1yc8_A 1yzz_A
Probab=97.97 E-value=1.6e-05 Score=44.16 Aligned_cols=29 Identities=17% Similarity=0.367 Sum_probs=25.3
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 72 ~~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~ 100 (124)
T 1yc7_A 72 DNAKNTVYLQMNSLQRE-DTGMYYCQIQCG 100 (124)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEEEEC
T ss_pred ECCCCEEEEEECCCCHH-HCEEEEEEEEeC
Confidence 44567899999999999 999999999873
No 405
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=97.97 E-value=2.1e-05 Score=45.55 Aligned_cols=38 Identities=18% Similarity=0.458 Sum_probs=29.8
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEE
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTV 54 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v 54 (98)
.+..+|.|.+++.+ |+|.|+|.+.|. .+..+..+.|.|
T Consensus 154 ~~~~~L~i~~~~~~-d~G~Y~C~a~n~---~g~~~~~~~l~V 191 (192)
T 2va4_A 154 HGSSSLHIKDVKLS-DSGRYDCEAASR---IGGHQKSMYLDI 191 (192)
T ss_dssp TTEEEEEEESCCGG-GCEEEEEEEECS---SCEEEEEEEEEE
T ss_pred cCceEEEEecCCcc-cCEEEEEEEEec---CCceEEEEEEEe
Confidence 44578999999999 999999999985 344555566655
No 406
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=97.97 E-value=5.8e-06 Score=44.55 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=27.0
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 61 r~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~ 93 (107)
T 1i8k_A 61 RFSSSGTGTDFVFTIENTLSE-DVGDYYCLQSFN 93 (107)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSS
T ss_pred CEEEEccCCEEEEEECCCCHH-HCEEEEEEEeeC
Confidence 454444567789999999999 999999999763
No 407
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=97.96 E-value=8.6e-06 Score=46.73 Aligned_cols=48 Identities=17% Similarity=0.115 Sum_probs=33.2
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT 56 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~ 56 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+.. .........|.|..
T Consensus 76 Rfs~~~~~~~~sL~I~~v~~~-DsG~Y~C~~~~~~--~~~fg~GT~L~V~~ 123 (146)
T 2yc1_B 76 RFTGSGSGTDFTLTISSLEPE-DFAIYYCQQYRYS--PRTFGQGTKVEIKR 123 (146)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCSEEEEEECSSS--SCEECCCEEEEEC-
T ss_pred CeEEecCCCEEEEEECCCCHH-HCEEEEEEEecCC--CCeECCCEEEEEeC
Confidence 455444566889999999999 9999999998642 12223345677753
No 408
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=97.96 E-value=7.7e-06 Score=44.74 Aligned_cols=33 Identities=15% Similarity=0.219 Sum_probs=27.3
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 67 rf~~~~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~ 99 (114)
T 2hp4_A 67 RFSGKRLGDTFVLTLSDFRRE-NEGYYFCSALSN 99 (114)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEEEET
T ss_pred cEEEEecCCEEEEEECCCCHH-HCEEEEEEEecC
Confidence 455544566789999999999 999999999873
No 409
>2frg_P TREM-like transcript-1; immunoglobulin-like, beta-sandwich, cell surface receptor, triggering receptor, platelet receptor, ITIM, immune system; 1.19A {Homo sapiens}
Probab=97.96 E-value=3e-05 Score=41.97 Aligned_cols=27 Identities=22% Similarity=0.459 Sum_probs=24.2
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
..+.++|+|.+++.+ |+|.|.|.+...
T Consensus 64 ~~~~~~L~I~~l~~~-Dsg~Y~C~~~~~ 90 (106)
T 2frg_P 64 GGGLLQVEMVTLQEE-DAGEYGCMVDGA 90 (106)
T ss_dssp ETTEEEEEECSCCGG-GCEEEEEEEEET
T ss_pred CCCEEEEEEccCCHH-HCEEEEEEeecC
Confidence 466799999999999 999999999874
No 410
>2xt1_B Camelid VHH 9; viral protein-immune system complex; 1.32A {Vicugna pacos} PDB: 2xv6_B 2xxc_B 2xxm_B
Probab=97.96 E-value=1.4e-05 Score=44.19 Aligned_cols=27 Identities=19% Similarity=0.313 Sum_probs=23.9
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEE
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLK 37 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~ 37 (98)
+...+.++|+|.+++.+ |+|.|.|.+.
T Consensus 75 ~~~~~~~sL~I~~v~~~-DsG~Y~C~~~ 101 (121)
T 2xt1_B 75 DDDKNILYLQMNDLKPE-DTAMYYCKAS 101 (121)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEET
T ss_pred eCCCCEEEEEECCCCHH-HCEEEEEEEE
Confidence 44567899999999999 9999999986
No 411
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=97.95 E-value=1.2e-05 Score=47.32 Aligned_cols=36 Identities=19% Similarity=0.319 Sum_probs=29.2
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
..|.|.+++.+ |+|.|+|.+.|. ....+..+.|.|.
T Consensus 176 ~~L~i~~~~~~-d~G~Y~C~a~N~---~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 176 PVISVKNASSE-YSGTYSCTVQNR---VGSDQCMLRLDVV 211 (214)
T ss_dssp SEEEECSCCGG-GCEEEEEEEECS---SCEEEEEEEECCB
T ss_pred CEEEEecCCHH-HCEEEEEEEEcC---CCcEEEEEEEEEe
Confidence 37999999999 999999999985 4455666677665
No 412
>3oai_A Maltose-binding periplasmic protein, myelin prote; schwann cell membrane protein, immunoglobulin-folding, inter adhesion, tetramer; HET: MAL; 2.10A {Escherichia coli}
Probab=97.95 E-value=1.2e-05 Score=53.72 Aligned_cols=42 Identities=24% Similarity=0.359 Sum_probs=29.6
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
..++++|+|++++.+ |+|.|.|.+.+... .......+.|.|+
T Consensus 463 ~~~~~sL~I~~v~~~-D~g~Y~C~v~~~~~-~~~~~~~l~l~V~ 504 (507)
T 3oai_A 463 RWKDGSIVIHNLDYS-DNGTFTCDVKNPPD-IVGKTSQVTLYVF 504 (507)
T ss_dssp GGTBCCEEECSCCGG-GCEEEEEEEEETTE-EEEEEEEEEEEEE
T ss_pred CCCceeEEECCCCcc-cCeEEEEEEEcCCC-cCCceeEEEEEEe
Confidence 447789999999999 99999999987411 1223333455554
No 413
>3bdb_A Novel immune-type receptor 11; immunoglobulin variable domain-like beta-sandwich, stalk region, immune system; 2.80A {Ictalurus punctatus}
Probab=97.95 E-value=2.5e-05 Score=44.12 Aligned_cols=48 Identities=15% Similarity=0.139 Sum_probs=33.9
Q ss_pred eEEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 5 EIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 5 ~~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
.|+......+.++|+|.+++.+ |+|.|.|.+.+.. .........|.|.
T Consensus 65 ~Rf~~~~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~~--~~~fg~GT~L~V~ 112 (137)
T 3bdb_A 65 SRFSMTVNDQKFDLNIIGARED-DGGEYFCGEVEGI--IIKFTSGTRLQFE 112 (137)
T ss_dssp TTEEEEESSSBEEEEEESCCST-TCEEEEEEEECSS--CEEEEEEEEECCC
T ss_pred CcEEEEecCCEEEEEECCCCHH-HCEEEEEEEccCC--eEEECCCEEEEEE
Confidence 4555555677889999999999 9999999998641 1223334456554
No 414
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=97.95 E-value=3.1e-05 Score=42.11 Aligned_cols=26 Identities=31% Similarity=0.356 Sum_probs=22.8
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
...++|+|.+++.+ |+|.|.|.+.+.
T Consensus 74 ~~~~sL~I~~~~~~-DsG~Y~C~~~~~ 99 (116)
T 3bj9_1 74 RNRGYLSISELQPE-DEAMYYCAMGAR 99 (116)
T ss_dssp GTEEEEEECSCCGG-GCEEEEEEECCS
T ss_pred CceEEEEECCCChh-HCEEEEEEEeCC
Confidence 34679999999999 999999999864
No 415
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.95 E-value=2.8e-05 Score=45.01 Aligned_cols=40 Identities=25% Similarity=0.443 Sum_probs=31.0
Q ss_pred CCCeEEEEEccce-eeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 12 DSGRYDLIISNAS-FERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 12 ~~~~~~l~I~~v~-~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
..+...|.|.+++ .. |+|.|+|.+.|. .+.....+.|.|.
T Consensus 142 ~~~~~~L~i~~v~~~~-d~G~Y~C~a~N~---~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 142 SQGRSELHIENLNMEA-DPGQYRCNGTSS---KGSDQAIITLRVR 182 (184)
T ss_dssp ETTEEEEEECSCCTTT-SSEEEEEEEEET---TEEEEEEEEEEEC
T ss_pred cCCeeEEEEeeccccc-cCceEEEEEEeC---CCcceEEEEEEEe
Confidence 3455689999999 89 999999999995 4555555666664
No 416
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=97.95 E-value=1.4e-05 Score=47.84 Aligned_cols=38 Identities=24% Similarity=0.331 Sum_probs=30.0
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEE
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVT 53 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~ 53 (98)
..+..+|.|.+++.+ |+|.|+|.+.|. .+..+..+.|+
T Consensus 167 ~~~~~~L~I~~v~~~-D~G~Y~C~a~N~---~G~~~~~~~L~ 204 (207)
T 3rbs_A 167 KDGICTLLITEFSKK-DAGIYEVILKDD---RGKDKSRLKLV 204 (207)
T ss_dssp SSEEEEEEETTCCGG-GCEEEEEEEEET---TEEEEEEEEEC
T ss_pred CCCEEEEEECCCCcc-cCEEEEEEEEcC---CCEEEEEEEEe
Confidence 455668999999999 999999999995 45555555554
No 417
>3cx5_J Heavy chain (VH) of FV-fragment; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Mus musculus} SCOP: b.1.1.1 PDB: 1kb9_J* 1kyo_J* 1p84_J* 2ibz_X* 1ezv_X* 3cxh_J*
Probab=97.94 E-value=1.4e-05 Score=44.46 Aligned_cols=28 Identities=14% Similarity=0.351 Sum_probs=24.7
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+
T Consensus 73 ~~~~~~~sL~I~~~~~~-Dsg~Y~C~~~~ 100 (127)
T 3cx5_J 73 DTSKNQFFLKLNSVTTE-DTATYYCARSE 100 (127)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEEEE
T ss_pred eCCCCEEEEEECCCCHH-HCEEEEEEEEe
Confidence 34577899999999999 99999999876
No 418
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=97.94 E-value=1.1e-05 Score=44.06 Aligned_cols=27 Identities=11% Similarity=0.266 Sum_probs=24.3
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
...+.++|+|.+++.+ |+|.|.|.+.+
T Consensus 73 ~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~ 99 (116)
T 1a2y_B 73 NSKSQVFLKMNSLHTD-DTARYYCARER 99 (116)
T ss_dssp GGGTEEEEEECSCCGG-GCEEEEEEEES
T ss_pred CCCCEEEEEECCCCHH-HCEEEEEEEec
Confidence 3467899999999999 99999999986
No 419
>1sjv_A R9; camelids antibody, domain swapping, heavy chain antibody, AN; 1.94A {Lama glama} SCOP: b.1.1.1
Probab=97.94 E-value=1.6e-05 Score=43.31 Aligned_cols=27 Identities=15% Similarity=0.142 Sum_probs=23.8
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
...+.++|+|.+++.+ |+|.|.|.+.+
T Consensus 73 ~~~~~~~L~I~~~~~~-DsG~Y~C~~~~ 99 (114)
T 1sjv_A 73 NAKKTVYLEMNSLEPE-DTAVYYCYTHY 99 (114)
T ss_dssp TTTCCEEEEECSCCGG-GCSEEEEEECC
T ss_pred CCCCEEEEEECCCCHH-HCEEEEEeEEc
Confidence 3467789999999999 99999999875
No 420
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=97.94 E-value=3.9e-05 Score=46.20 Aligned_cols=28 Identities=14% Similarity=0.269 Sum_probs=24.8
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
...+..+|+|.+++.+ |+|.|+|.+.+.
T Consensus 194 ~~~~~~~L~I~~v~~~-D~G~Y~C~a~n~ 221 (238)
T 2p1y_A 194 KREKKLSLHIADSQPG-DSATYFCAAIDT 221 (238)
T ss_dssp TTTTEEEEEETTCCGG-GCEEEEEEEEET
T ss_pred CCCCeEEEEEcCCCHH-HCEEEEEEEeeC
Confidence 4556789999999999 999999999985
No 421
>1q8m_A Triggering receptor expressed on myeloid cells 1; V-type IG-like domain, immunoglobulin-like, immune system receptor; HET: GSH; 2.60A {Homo sapiens} SCOP: b.1.1.1
Probab=97.93 E-value=4.5e-05 Score=42.81 Aligned_cols=30 Identities=23% Similarity=0.418 Sum_probs=25.9
Q ss_pred EeCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 9 YRPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 9 ~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
.+...+.++|+|.+++.+ |+|.|.|.+...
T Consensus 74 ~~~s~~~~~LtIs~lq~e-Dsa~Y~Ca~~~~ 103 (127)
T 1q8m_A 74 DYHDHGLLRVRMVNLQVE-DSGLYQCVIYQP 103 (127)
T ss_dssp EETTTTEEEEEECSCCGG-GCEEEEEEECCC
T ss_pred EeCCCCEEEEEECCCCHH-HCEEEEEEEECC
Confidence 346678999999999999 999999988753
No 422
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=97.93 E-value=1.2e-05 Score=44.11 Aligned_cols=28 Identities=21% Similarity=0.230 Sum_probs=24.6
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
...+.++|+|.+++.+ |+|.|.|.+...
T Consensus 74 ~~~~~~~L~I~~~~~~-DsG~Y~C~~~~~ 101 (120)
T 1n4x_H 74 TSTSTAFLQINNLKNE-DTATYFCVRDRH 101 (120)
T ss_dssp GGGTEEEEEECSCCGG-GCEEEEEEEESS
T ss_pred CCCCEEEEEECCCCHH-HCEEEEEEEEcc
Confidence 4467889999999999 999999999863
No 423
>1zvh_A Immunoglobulin heavy chain antibody variable domain; beta sandwich, immunoglobulin fold, protein-protein heterocomplex; 1.50A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 3dwt_A 1g6v_K 1zv5_A 1kxq_E
Probab=97.93 E-value=2.2e-05 Score=44.20 Aligned_cols=29 Identities=14% Similarity=0.170 Sum_probs=25.5
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 73 ~~~~~~~sL~I~~~~~~-DsG~Y~C~~~~~ 101 (134)
T 1zvh_A 73 DNAENTVYLQMNSLKPE-DTALYYCAAARQ 101 (134)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEEEES
T ss_pred cCCCCEEEEEECCCCHH-HCEEEEEEEecC
Confidence 34577899999999999 999999999873
No 424
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=97.93 E-value=3.6e-05 Score=52.44 Aligned_cols=77 Identities=17% Similarity=0.305 Sum_probs=48.2
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEE--eCCCCceecCCCcEEEEEEcCCCCCC-CeEE
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKI--SPGANPVATEGRAIELVCSTSGGSPD-PQIS 93 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i--~~~~~~~~~~g~~~~l~C~~~~~~p~-~~~~ 93 (98)
.|+|....+. |.+.|+|++.+.... ......+.+.+. .+.+|.+ .. +......|..+.|.|.+.+.+|. ..++
T Consensus 409 ~L~i~~~~~~-~~~~y~C~v~~~~~~-~~~~~~~~~~~~-~~~~P~V~~~~-~~~~~~~~~~~~L~C~v~gfyP~~i~v~ 484 (551)
T 1ntl_A 409 ELPIMHQDWL-NGKEFKCRVNSAAFP-APIEKTISKTKG-RPKAPQLYTIP-PPKEQMAKDKVSLTCMITDFFPEDITVE 484 (551)
T ss_pred eeEcCHHHcc-CCceEEEEEecCCCC-CCeEEEEecCCC-CCcCCceEEeC-CChhhccCCceEEEEEEEEeECCCCEEE
Confidence 4677777787 889999999885321 122223333332 1223332 22 22334568889999999877875 5899
Q ss_pred EEec
Q psy5866 94 VTLQ 97 (98)
Q Consensus 94 W~~~ 97 (98)
|+++
T Consensus 485 W~k~ 488 (551)
T 1ntl_A 485 WQWN 488 (551)
T ss_pred EEEC
Confidence 9975
No 425
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=97.93 E-value=2.2e-05 Score=43.88 Aligned_cols=30 Identities=27% Similarity=0.473 Sum_probs=26.0
Q ss_pred EeCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 9 YRPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 9 ~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
.+...+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 59 ~~~~~~~~sL~I~~v~~~-DsG~Y~C~~~~~ 88 (126)
T 3moq_A 59 VNKGSKSFSLRISDLRVE-DSGTYKCQAFYV 88 (126)
T ss_dssp EETTTTEEEEEECSCCGG-GCEEEEEEEEEE
T ss_pred EeCCCCEEEEEECcCChH-hCEEEEEEEEEc
Confidence 345567899999999999 999999999874
No 426
>1xiw_D Immunoglobulin heavy chain variable region; CD3-epsilon, CD3-delta, UCHT1-SCFV, immunoglobulin fold, antibody-antigen complex; 1.90A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy3_B
Probab=97.93 E-value=1.7e-05 Score=43.78 Aligned_cols=27 Identities=15% Similarity=0.202 Sum_probs=24.3
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
...+.++|+|.+++.+ |+|.|.|.+..
T Consensus 74 ~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~ 100 (122)
T 1xiw_D 74 KSSSTAYMELLSLTSE-DSAVYYCARSG 100 (122)
T ss_dssp GGGTEEEEEECSCCGG-GCEEEEEEEEE
T ss_pred cCCCEEEEEECCCCHH-HCEEEEEEEec
Confidence 4467899999999999 99999999987
No 427
>2wzp_D Camelid VHH5; baseplate, viral protein; 2.60A {Lama glama} PDB: 2bse_D
Probab=97.93 E-value=1.3e-05 Score=44.17 Aligned_cols=28 Identities=14% Similarity=0.264 Sum_probs=24.6
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
...+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 74 ~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~ 101 (123)
T 2wzp_D 74 SGKNTVYLQMNSLKPE-DTAIYYCAARSG 101 (123)
T ss_dssp TTEEEEEEEECSCCGG-GCEEEEEEEEES
T ss_pred CCCCEEEEEECCCCHH-HCEEEEEEEecC
Confidence 4466789999999999 999999999874
No 428
>3b9v_A Heavy chain variable domain; antibody engineering, phage display, immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B 1fgv_H 2vh5_H*
Probab=97.93 E-value=1.4e-05 Score=43.90 Aligned_cols=28 Identities=14% Similarity=0.178 Sum_probs=24.6
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
...+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 74 ~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~ 101 (120)
T 3b9v_A 74 TSKNTAYLQMNSLRAE-DTAVYYCARWGG 101 (120)
T ss_dssp GGGTEEEEEECSCCGG-GCEEEEEEEECT
T ss_pred CCCCEEEEEECCCCHH-HCEEEEEEEEcC
Confidence 3467889999999999 999999999863
No 429
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=97.92 E-value=9.9e-05 Score=46.82 Aligned_cols=78 Identities=14% Similarity=0.222 Sum_probs=47.5
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCCCEE--eCCCCceecCCCcEEEEEEc--CCCCC--
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKI--SPGANPVATEGRAIELVCST--SGGSP-- 88 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~p~i--~~~~~~~~~~g~~~~l~C~~--~~~~p-- 88 (98)
...|+|..+... |+|.|+|.+.+..+. ...+. .+.|...+. +.+ ..........+..+.|.+.+ .+|.|
T Consensus 51 T~tLti~s~t~s-dSG~YqCvVTDa~Gc-s~tSs--~VtVT~~a~-l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA 125 (304)
T 3shs_A 51 TATLTVADATSE-NAGSYKVTVQDTDTM-TSVES--EVFLMEEAE-LIVNITEPQHFYVSSQTDVELHATVKFSGGKTPA 125 (304)
T ss_dssp SSEEEESSCCGG-GCEEEEEEEEETTTC-CEEEC--CCEEECBCC-EEEEESSCSEEEECSSCCEEEEEEEEETTSCCSS
T ss_pred cceEEeeecccc-CCeEEEEEEEECCCC-eeeee--eEEEeccCc-eeEEecCCCceeccCCCeEEEEEEEeccCCCCcc
Confidence 347899999999 999999999985332 11222 223322221 122 21122334456678888876 66666
Q ss_pred ---CCeEEEEec
Q psy5866 89 ---DPQISVTLQ 97 (98)
Q Consensus 89 ---~~~~~W~~~ 97 (98)
..++.|+++
T Consensus 126 ~~~~yTYQWyKn 137 (304)
T 3shs_A 126 DNYELHYSWSKG 137 (304)
T ss_dssp TTCCCEEEEEET
T ss_pred cCCCceeEEeeC
Confidence 569999985
No 430
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=97.92 E-value=7.9e-06 Score=44.43 Aligned_cols=33 Identities=21% Similarity=0.257 Sum_probs=26.8
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 66 R~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~ 98 (113)
T 1dlf_L 66 RFSGSGSGTDFTLKISRVEAE-DLGVYFCSQSTH 98 (113)
T ss_dssp TEEEEEETTEEEEEECSCCGG-GCEEEEEEECSS
T ss_pred CEEEEccCCEEEEEECCCChH-HCEEEEEEEecC
Confidence 444444567889999999999 999999999763
No 431
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=97.92 E-value=1.1e-05 Score=44.09 Aligned_cols=32 Identities=19% Similarity=0.403 Sum_probs=27.1
Q ss_pred EEEE--eCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 6 IIDY--RPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 6 ~~~~--~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
|+.. +...+.++|+|.+++.+ |+|.|.|.+..
T Consensus 62 R~~~~~~~~~~~~~L~I~~~~~~-DsG~Y~C~~~~ 95 (116)
T 1fo0_A 62 HYSLNFQKPKSSIGLIITATQIE-DSAVYFCAMRG 95 (116)
T ss_dssp TEEEEEEGGGTEEEEEECSCCGG-GCEEEEEEEEC
T ss_pred cEEEEEeCCCCEEEEEECCCChh-hCEEEEEEEEc
Confidence 4444 55677899999999999 99999999986
No 432
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=97.92 E-value=2.3e-05 Score=45.28 Aligned_cols=43 Identities=30% Similarity=0.505 Sum_probs=33.1
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ 59 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~ 59 (98)
....|.|.+++.+ |+|.|+|.+.+.. ....+..+.|.|..+|.
T Consensus 132 ~~~~L~i~~v~~~-d~G~Y~C~a~n~~--~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 132 ENHNISITNATVE-DSGTYYCTGKVWQ--LDYESEPLNITVIKAPR 174 (176)
T ss_dssp CSSEEEESSCCGG-GCEEEEEEEEETT--EEEECCCEEEEEECSCC
T ss_pred CCCeEEECCCCcc-cCEEEEEEEEeCC--cceEecCEEEEEecCCC
Confidence 3457999999999 9999999999851 24455567888876654
No 433
>1j05_H T84.66 antibody, anti-CEA MAB T84.66, heavy chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1dvf_D 1mvu_B 1ap2_B 2ap2_B
Probab=97.91 E-value=1.3e-05 Score=44.13 Aligned_cols=28 Identities=18% Similarity=0.197 Sum_probs=24.7
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
...+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 74 ~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~ 101 (121)
T 1j05_H 74 TSSNTAYLQLTSLTSE-DTAVYYCAPFGY 101 (121)
T ss_dssp GGGTEEEEEECSCCGG-GCEEEEEEEEBT
T ss_pred CCCCEEEEEECCCCHH-HCEEEEEEEEcC
Confidence 3467889999999999 999999999874
No 434
>2d7t_H Anti polyhydroxybutyrate antibody FV, heavy chain; plastic, immune system; 1.70A {Homo sapiens}
Probab=97.91 E-value=2.1e-05 Score=44.63 Aligned_cols=43 Identities=19% Similarity=0.166 Sum_probs=30.4
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT 56 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~ 56 (98)
...+.++|+|.+++.+ |+|.|.|.+.... .........|.|..
T Consensus 74 ~~~~~~sL~I~~~~~~-Dsg~Y~C~~~~~~--~~~fg~GT~L~V~~ 116 (139)
T 2d7t_H 74 TSISTVYMEVRRLRSD-DTAVYYCATGWWG--MDVWGQGTLVTVSS 116 (139)
T ss_dssp GGGTEEEEEECSCCGG-GCEEEEEEECSSS--CCEECCCEEEEECC
T ss_pred CCCCEEEEEECcCCHH-HCEEEEEEEeeCC--cCEECCCEEEEEec
Confidence 4467899999999999 9999999987521 12222334666643
No 435
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=97.91 E-value=2.8e-05 Score=46.16 Aligned_cols=43 Identities=21% Similarity=0.204 Sum_probs=31.7
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPP 58 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~ 58 (98)
.+...|.|.+++.+ |+|.|+|.+.|..+ ...+..+.|.|..++
T Consensus 164 ~~~~~L~i~~~~~~-d~G~Y~C~a~N~~G--~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 164 ESIGALQIEQSEES-DQGKYECVATNSAG--TRYSAPANLYVRGTK 206 (212)
T ss_dssp TTEEEEEECSCCGG-GCEEEEEEEEETTE--EEECCCEEEEEEC--
T ss_pred CCeEEEEEcCCCcc-cCEEEEEEEECCCC--ccccccccEEEEecc
Confidence 34578999999999 99999999999622 334455777777554
No 436
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=97.91 E-value=1.9e-05 Score=43.84 Aligned_cols=26 Identities=23% Similarity=0.339 Sum_probs=23.2
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
.+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 71 ~~~~~L~I~~v~~~-DsG~Y~C~~~~~ 96 (127)
T 2jju_A 71 NLDFSISISNITPA-DAGTYYCVKFRK 96 (127)
T ss_dssp CCBCCEEECSCCGG-GCEEEEEEEEEC
T ss_pred CCEEEEEECCCCHH-HCEEEEEEEEcC
Confidence 34678999999999 999999999874
No 437
>3osk_A Cytotoxic T-lymphocyte protein 4; beta sandwich, homodimer, immunoglobulin superfamily (beta S fold, receptor, signalling, B7-1(CD80), B7-2(CD86); HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 PDB: 2x44_D 1i85_C 1ah1_A* 1i8l_C* 3bx7_C
Probab=97.90 E-value=2.5e-05 Score=43.64 Aligned_cols=31 Identities=16% Similarity=0.318 Sum_probs=26.7
Q ss_pred EEEeCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 7 IDYRPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 7 ~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
+......+.++|+|.+++.+ |+|.|.|.+..
T Consensus 68 f~~~~~~~~~sL~I~~l~~~-Dsg~Y~C~~~~ 98 (130)
T 3osk_A 68 CTGTSSGNQVNLTIQGLRAM-DTGLYICKVEL 98 (130)
T ss_dssp EEEEEETTEEEEEECSCCGG-GCEEEEEEEEE
T ss_pred EeccCCCCEEEEEEcCCChH-HCEEEEEEEEe
Confidence 55555678899999999999 99999999875
No 438
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=97.89 E-value=2.9e-05 Score=47.09 Aligned_cols=47 Identities=19% Similarity=0.148 Sum_probs=32.9
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
++........++|+|.+++.+ |+|.|+|.+.+.. .........|.|.
T Consensus 195 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~a~~~~--~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 195 RFSGSGSGTDFTLTISRLEPE-DFAVYYCQQRSNW--PPTFGQGTKVEVK 241 (247)
T ss_dssp TEEEECSSSEEEEEECSCCGG-GCEEEEEEECSSS--SCEECCCEEEEEC
T ss_pred CEEEecCCCeEEEEECcCCHH-HCEEEEEEEccCC--CceEcCCEEEEEC
Confidence 344444556788999999999 9999999998742 2333344566664
No 439
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=97.88 E-value=2e-05 Score=42.95 Aligned_cols=28 Identities=29% Similarity=0.605 Sum_probs=24.9
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+
T Consensus 60 ~~~~~~~~L~I~~~~~~-DsG~Y~C~~~~ 87 (113)
T 1sq2_N 60 NSGSKSFSLRINDLTVE-DGGTYRCGLGV 87 (113)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEECB
T ss_pred eCCCCEEEEEECCCChh-hCEEEEEEEEe
Confidence 34567899999999999 99999999986
No 440
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=97.88 E-value=3.6e-05 Score=52.91 Aligned_cols=48 Identities=19% Similarity=0.280 Sum_probs=39.0
Q ss_pred ceeEEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEE
Q psy5866 3 KVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTV 54 (98)
Q Consensus 3 ~~~~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v 54 (98)
.+.++......+.++|.|.++... |+|.|+|+|.|. .+..+..+.|+|
T Consensus 525 ~s~~~~i~~~~~~~~L~I~~~~~~-D~G~Yt~~A~N~---~G~~~~~v~l~V 572 (573)
T 3uto_A 525 QSVKYMKRYNGNDYGLTINRVKGD-DKGEYTVRAKNS---YGTKEEIVFLNV 572 (573)
T ss_dssp SSSSEEEEEETTEEEEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEE
T ss_pred cCCcEEEEEcCCEEEEEEcCCCcc-cCcEEEEEEEeC---CCcEEEEEEEEE
Confidence 345566666678899999999999 999999999996 577777777776
No 441
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=97.88 E-value=1.4e-05 Score=48.80 Aligned_cols=49 Identities=10% Similarity=0.102 Sum_probs=33.9
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP 57 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~ 57 (98)
++......+.++|+|.+++.+ |+|.|.|.+.+.. .........|.|...
T Consensus 197 r~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~n~~--~~~fg~gt~l~v~~~ 245 (253)
T 3uzq_A 197 RFSGSGSRTDFTLTINPVEAD-DVATYFCQRSNEV--PWTFGGGTKLEIKRP 245 (253)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSSS--SCCBCCCEEEEECCC
T ss_pred ceEEeCCCCEEEEEECCCCHH-HCEEEEEEEccCC--CcEECCCEEEEEcCC
Confidence 344444456778999999999 9999999998742 233334456776533
No 442
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=97.88 E-value=1.6e-05 Score=55.63 Aligned_cols=68 Identities=24% Similarity=0.288 Sum_probs=30.7
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCee--eEeeEEEEEECCCCCCEEeCCCCceecCCCcEEEEEEcC
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDL--HSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTS 84 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~--~~~~~~l~v~~~~~~p~i~~~~~~~~~~g~~~~l~C~~~ 84 (98)
+..|.|.+++.. |+|.|.|.+.+...+... ....+.|.|.++|....... ......+|..+.++|.+.
T Consensus 585 ~~~LlI~~v~~~-DsG~Y~C~A~e~~~~~~~~~~~~~~~l~V~v~P~~~~~p~-~~~~~~~g~~~~~~~~~~ 654 (663)
T 1olz_A 585 RKNLLIFNLSEG-DSGVYQCLSEERVKNKTVFQVVAKHVLEVKVVPKPVVAPT-LSVVQTEGSRIATKVLVA 654 (663)
T ss_dssp TTCEEECSCCGG-GCEEEEEEEEEECSSSEEEEEEEEEEEEEEC----------------------------
T ss_pred CCeEEEEecCcc-cCeEEEEEEEECccCCCceEEEEEEEEEEEeCCccCCCCC-ChhhhhcCCceEEEeecc
Confidence 346999999999 999999999996322222 23567788887765433322 346788999999999874
No 443
>1kxt_B Immunoglobulin VHH fragment; alpha 8 beta 8, beta barrel, hydrolase, immune system; 2.00A {Camelus dromedarius} SCOP: b.1.1.1
Probab=97.88 E-value=2.5e-05 Score=43.49 Aligned_cols=28 Identities=14% Similarity=0.178 Sum_probs=24.6
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+
T Consensus 72 ~~~~~~~sL~I~~~~~~-Dsg~Y~C~~~~ 99 (127)
T 1kxt_B 72 DNAANTAYLQMDSLKPE-DTAVYYCAAGP 99 (127)
T ss_dssp CSSSSEEEEEECSCCGG-GCEEEEEEECS
T ss_pred eCCCCEEEEEECcCCHH-HCEEEEEEEEc
Confidence 34577899999999999 99999999875
No 444
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=97.88 E-value=8.5e-05 Score=42.85 Aligned_cols=36 Identities=19% Similarity=0.322 Sum_probs=29.4
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
..|.|.+++.+ |+|.|+|.+.+. .......+.|.|+
T Consensus 152 ~~L~i~~~~~~-d~G~Y~C~a~n~---~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 152 TELTVRNIINS-DGGPYVCRATNK---AGEDEKQAFLQVF 187 (189)
T ss_dssp TEEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEE
T ss_pred CEEEEcCCChh-hCeeEEEEEEeC---CCceeEEEEEEEE
Confidence 46999999999 999999999995 4555666777765
No 445
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=97.88 E-value=0.00024 Score=44.19 Aligned_cols=89 Identities=16% Similarity=0.109 Sum_probs=53.6
Q ss_pred eEEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC-CCCC-----------------EEeC-
Q psy5866 5 EIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP-PQPP-----------------KISP- 65 (98)
Q Consensus 5 ~~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~-~~~p-----------------~i~~- 65 (98)
..+..+...+...|.+++++.+ |...|.|..... ...+.. ...++|-.+ +..| .+..
T Consensus 68 ~TiSrD~s~nt~yLqm~sL~~e-DTAvYYCAr~~~-~d~WGq--GT~VTVSSast~~ps~~~l~~~~sgGSgsdivltQs 143 (254)
T 4f9p_D 68 TTLTADQSSSTAYMQLSSLTSD-DSAVYFCARSDY-GAYWGQ--GTLVTVSAAGGGGSGGGGSGGGGSGGGGSDIVLTQS 143 (254)
T ss_dssp EEEEEETTTTEEEEEECSCCGG-GCEEEECEESSS-CCEECC--CEEEEECC-------------------CCSCCEEEE
T ss_pred EEEeeccCCCcCeeEEccCCCC-CCEEEEEEecCC-CCCcCC--CEEEEEeCCCCcCCCCCCCccccccccccccccccC
Confidence 4556677888899999999999 999999964321 000111 122333211 0001 1111
Q ss_pred CCCceecCCCcEEEEEEcCCCCCCCeEEEEecC
Q psy5866 66 GANPVATEGRAIELVCSTSGGSPDPQISVTLQV 98 (98)
Q Consensus 66 ~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~~ 98 (98)
.....+.+|+.++|+|.+.. .-.-.+.|++|.
T Consensus 144 P~slsvs~G~~vtlsC~~S~-~~~~~l~WyqQ~ 175 (254)
T 4f9p_D 144 PVTLSVTPGDSVSLSCRASQ-SISNNLHWYRQK 175 (254)
T ss_dssp CSEEEECTTCEEEEEEEESS-CCTTCCEEEEEC
T ss_pred CceeEEcCCCcEeeEEEccC-cccCCcEEEEEC
Confidence 12346889999999999763 333458999873
No 446
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=97.87 E-value=9.9e-06 Score=43.94 Aligned_cols=33 Identities=21% Similarity=0.277 Sum_probs=26.7
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 64 R~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~ 96 (111)
T 1i3g_L 64 RFTGSGSGTDFTLTISNVQSE-DLADYFCQQYSS 96 (111)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCSEEEEEECSS
T ss_pred cEEEEcCCCEEEEEECCCCHH-HCEEEEEEEecC
Confidence 444444566789999999999 999999999763
No 447
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=97.87 E-value=5.9e-05 Score=43.74 Aligned_cols=46 Identities=15% Similarity=0.219 Sum_probs=33.0
Q ss_pred EEEEeCCCCeEEEEEcccee-eccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 6 IIDYRPDSGRYDLIISNASF-ERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~-~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
++..........|.|.++.. + |+|.|+|.+.|. .+..+..+.|.|.
T Consensus 149 ~~~~~~~~~~~~L~i~~~~~~~-d~G~Y~C~a~n~---~g~~~~~~~l~V~ 195 (197)
T 3lcy_A 149 NITIENTEHYTHLVMKNVQRKT-HAGKYKVQLSNV---FGTVDAILDVEIQ 195 (197)
T ss_dssp SEEEEECSSEEEEEESSCCHHH-HCEEEEEEEECS---SCEEEEEEEEEEE
T ss_pred ceEEEEcCCEEEEEEccccchh-hCceEEEEEEcC---cCceEEEEEEEEe
Confidence 33344444457899999985 8 999999999985 4455666667664
No 448
>1dqt_A CTLA4, cytotoxic T lymphocyte associated antigen 4; immunoglobulin variable domain-like beta-sandwich, homodimer, immune system; 2.00A {Mus musculus} SCOP: b.1.1.1
Probab=97.87 E-value=1.4e-05 Score=43.66 Aligned_cols=30 Identities=20% Similarity=0.351 Sum_probs=25.0
Q ss_pred EEeCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 8 DYRPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 8 ~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
......+.++|+|.+++.+ |+|.|.|.+..
T Consensus 67 ~~~~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~ 96 (117)
T 1dqt_A 67 SGTFNESRVNLTIQGLRAV-DTGLYLCKVEL 96 (117)
T ss_dssp EEEEETTEEEEEECSCCGG-GCEEEEEEEEE
T ss_pred ecccCCCEEEEEEeCCCcc-cCEEEEEEEee
Confidence 4444556889999999999 99999999865
No 449
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.86 E-value=1.3e-05 Score=42.14 Aligned_cols=39 Identities=15% Similarity=0.356 Sum_probs=28.4
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
...|.|.+++.+ |+|.|+|.+.+... ....+..+.|.|.
T Consensus 56 ~~~L~i~~v~~~-d~G~Y~C~a~n~~~-~~~~s~~~~v~V~ 94 (96)
T 2ens_A 56 SPVLILPEIGPQ-DQGTYSCVATHSSH-GPQESRAVSISII 94 (96)
T ss_dssp CSEEEEESCCTT-TCEEEECEECCSSC-CCEECCCEEEEEC
T ss_pred CCEEEECCCCcc-cCEEEEEEEEeCCC-CcEEEEEEEEEEe
Confidence 457999999999 99999999998432 2234444556553
No 450
>1i3u_A Antibody VHH LAMA domain; VHH fragment, immune system; HET: RR1; 1.95A {Lama glama} SCOP: b.1.1.1 PDB: 1i3v_A
Probab=97.86 E-value=1.9e-05 Score=43.92 Aligned_cols=28 Identities=18% Similarity=0.309 Sum_probs=24.6
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
...+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 79 ~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~ 106 (127)
T 1i3u_A 79 NAKNTVNLQMNSLKPE-DTAVYYCAAKTT 106 (127)
T ss_dssp GGGTEEEEEECSCCGG-GCEEEEEEEESC
T ss_pred CCCCEEEEEECCCChh-hCEEEEEEEEcC
Confidence 3467899999999999 999999999863
No 451
>3nn8_A Engineered SCFV, heavy chain; beta barrel, antibody fragment, immunoglobulin, immune syste; 3.10A {Mus musculus}
Probab=97.86 E-value=3.4e-05 Score=42.64 Aligned_cols=28 Identities=18% Similarity=0.265 Sum_probs=24.7
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
+...+.++|+|.+++.+ |+|.|.|.+..
T Consensus 74 ~~~~~~~sL~I~~~~~~-Dsg~Y~C~~~~ 101 (122)
T 3nn8_A 74 DKTSSTVYLELRSLTSE-DSSVYYCARRG 101 (122)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEEEC
T ss_pred eCCCCEEEEEECCCChh-hCEEEEEEEEe
Confidence 34577899999999999 99999999875
No 452
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=97.85 E-value=2.9e-05 Score=43.83 Aligned_cols=33 Identities=21% Similarity=0.187 Sum_probs=27.0
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 68 Rf~~~~~~~~~sL~I~~v~~~-DsG~Y~C~~~~~ 100 (135)
T 1p4b_L 68 RFSGSLIGDKAALTITGAQTE-DEAIYFCALWYS 100 (135)
T ss_dssp TEEEEEETTEEEEEEESCCGG-GCEEEEEEEECS
T ss_pred CEEEEcCCCEEEEEECCCChh-HCEEEEEEEecC
Confidence 455444566889999999999 999999999864
No 453
>2x1q_A Gelsolin nanobody; contractIle protein; 1.06A {Lama glama} PDB: 2x1p_A 2xa3_A 3k7u_A 3sn6_N* 3stb_A 2x1o_A 3k80_A 1ol0_A 1u0q_A 1qd0_A* 3ezj_B 3p0g_B* 1mvf_A 1t2j_A
Probab=97.85 E-value=2.1e-05 Score=43.74 Aligned_cols=28 Identities=14% Similarity=0.150 Sum_probs=24.7
Q ss_pred CCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 11 PDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 11 ~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
...+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 74 ~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~~ 101 (127)
T 2x1q_A 74 NAKNLLYLEMLSLEPE-DTAVYYCAASSR 101 (127)
T ss_dssp GGGTEEEEEECSCCGG-GCEEEEEEEECC
T ss_pred CCCCEEEEEEcCCCHH-HCEEEEEEEEec
Confidence 4567899999999999 999999999863
No 454
>2p45_B Antibody CAB-RN05; seMet phasing, camelid single-domain antibody, VHH, RNAse A, yeast surface display, hydrolase/immune system complex; 1.10A {Camelus dromedarius} PDB: 2p46_B 2p47_B 2p48_B 2p44_B 2p49_B 2p42_B 2p43_B 1bzq_K 3qsk_B 2p4a_B 1op9_A 1sjx_A 3qxt_A* 3qxu_A 3eba_A
Probab=97.85 E-value=2.3e-05 Score=43.19 Aligned_cols=32 Identities=13% Similarity=0.180 Sum_probs=26.4
Q ss_pred EEEEe--CCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 6 IIDYR--PDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 6 ~~~~~--~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
|+.+. ...+.++|+|.+++.+ |+|.|.|.+.+
T Consensus 69 R~~~~~~~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~ 102 (123)
T 2p45_B 69 RMTISRDKGKNTVYLQMDSLKPE-DTATYYCAAGG 102 (123)
T ss_dssp TEEEECCTTSSEEEEEESSCCGG-GCEEEEEEESS
T ss_pred eEEEEEeCCCCEEEEEECCCCHH-HCEEEEEEEEe
Confidence 45544 3467899999999999 99999999875
No 455
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=97.85 E-value=2.1e-05 Score=49.03 Aligned_cols=49 Identities=16% Similarity=0.158 Sum_probs=33.4
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
|+......+.++|+|.+++.+ |+|.|.|.+.+.............|.|.
T Consensus 201 r~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~~~~~~~~g~~t~l~V~ 249 (280)
T 3fku_X 201 RFSASRSGNTASLTITGLQPE-DEADYYCSTWDSSLSAVVFGGGTKLTVL 249 (280)
T ss_dssp TEEEEEETTEEEEEECSCCGG-GCSEEEEEEEETTTTEEEEBCCCEEEEC
T ss_pred CEEEEccCCEEEEEECCCCHH-HCEEEEEEEecCCCCceEECCCEEEEEC
Confidence 444444566788999999999 9999999998853111223334566664
No 456
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=97.84 E-value=1.8e-05 Score=42.57 Aligned_cols=30 Identities=20% Similarity=0.428 Sum_probs=23.7
Q ss_pred EEEeCCCCeEEEEEccceeeccCeEEEEEEE
Q psy5866 7 IDYRPDSGRYDLIISNASFERDNGKFECRLK 37 (98)
Q Consensus 7 ~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~ 37 (98)
+.+....+..+|.|.+++.+ |+|.|+|.+.
T Consensus 63 ~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~a~ 92 (104)
T 1pd6_A 63 YIFESIGAKRTLTISQCSLA-DDAAYQCVVG 92 (104)
T ss_dssp SEEEEETTEEEEEECSCSSS-SCEEEEEEET
T ss_pred EEEEecCCEEEEEECCCCcc-cCEEEEEEEC
Confidence 33333445678999999999 9999999994
No 457
>3k1k_C Enhancer; nanobody, antibody-complex, chromophore, luminescence, photoprotein, luminescent protein/immune system complex; HET: GYS; 2.15A {Lama pacos} SCOP: b.1.1.1 PDB: 3miq_E* 3ogo_E*
Probab=97.83 E-value=3.6e-05 Score=42.74 Aligned_cols=29 Identities=14% Similarity=0.220 Sum_probs=24.8
Q ss_pred EeCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 9 YRPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 9 ~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
.+...+.++|+|.+++.+ |+|.|.|.+.+
T Consensus 74 ~~~~~~~~sL~I~~~~~~-Dsg~Y~Ca~~~ 102 (123)
T 3k1k_C 74 RDDARNTVYLQMNSLKPE-DTAVYYCNVNV 102 (123)
T ss_dssp EETTTTEEEEEECSCCGG-GCEEEEEEEES
T ss_pred EeCCCCEEEEEECCCChh-hCEEEEEEEec
Confidence 344567899999999999 99999999864
No 458
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=97.82 E-value=4.4e-05 Score=42.26 Aligned_cols=29 Identities=21% Similarity=0.543 Sum_probs=25.3
Q ss_pred EeCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 9 YRPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 9 ~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
.+...+.++|+|.+++.+ |+|.|.|.+..
T Consensus 59 ~~~~~~~~~L~I~~~~~~-DsG~Y~C~~~~ 87 (121)
T 2i24_N 59 VNRGSKSFSLRINDLTVK-DSGTYRCKPES 87 (121)
T ss_dssp EETTTTEEEEEECSCCGG-GCEEEEEEEEE
T ss_pred ecCCCCEEEEEECCCChh-hCEEEEEEEec
Confidence 345667899999999999 99999999975
No 459
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=97.81 E-value=1.4e-05 Score=43.33 Aligned_cols=27 Identities=15% Similarity=0.348 Sum_probs=24.2
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEE
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLK 37 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~ 37 (98)
+...+.++|+|.+++.+ |+|.|.|.+.
T Consensus 66 ~~~~~~~~L~I~~~~~~-DsG~Y~C~~~ 92 (112)
T 2z35_A 66 NKEATSFHLQKASVQES-DSAVYYCALS 92 (112)
T ss_dssp BTTTTBCCEEESSCCST-TCSEEEEEEE
T ss_pred cCCCCEEEEEECCCChh-hCEEEEEEEE
Confidence 45667889999999999 9999999997
No 460
>3k74_B Nanobody; immunoglobulin, antibiotic resista methotrexate resistance, NADP, one-carbon metabolism, oxidoreductase, trimethoprim resistance; 1.95A {Lama glama}
Probab=97.81 E-value=3.6e-05 Score=42.03 Aligned_cols=29 Identities=14% Similarity=0.161 Sum_probs=24.7
Q ss_pred EeCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 9 YRPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 9 ~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
.+...+.++|+|.+++.+ |+|.|.|.+..
T Consensus 70 ~~~~~~~~sL~I~~~~~~-Dsg~Y~C~~~~ 98 (115)
T 3k74_B 70 RDNAKNTLYLQMNSLTSE-DTAVYYCAKDW 98 (115)
T ss_dssp EETTTTEEEEEECSCCGG-GCEEEEEEEST
T ss_pred EcCCCCEEEEEECCCChH-hCEEEEEEEEc
Confidence 344567899999999999 99999999865
No 461
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=97.81 E-value=2.6e-05 Score=47.69 Aligned_cols=47 Identities=15% Similarity=0.107 Sum_probs=32.3
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
|+........++|+|.+++.+ |+|.|.|.+.+.. .........|.|.
T Consensus 202 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~--~~~fg~gt~l~v~ 248 (257)
T 3gkz_A 202 RFSGSGSGTSYSLTISSMEAE-DAASYFCHQWSSF--PFTFGSGTKLEIK 248 (257)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCEEEEEEECSSS--SCEECCCEEEEEC
T ss_pred CEEEecCCCEEEEEECCCChH-HCEEEEEEEccCC--ceEEcCCEEEEEE
Confidence 344444456778999999999 9999999998642 2233334566664
No 462
>3lh2_H FV 4E10 heavy chain; epitope-scaffold, immune system; 2.65A {Homo sapiens} PDB: 3h3p_H 3lhp_H 2xtj_D
Probab=97.80 E-value=5.4e-05 Score=42.95 Aligned_cols=29 Identities=14% Similarity=0.205 Sum_probs=25.5
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
+...+.++|+|.+++.+ |+|.|.|.+...
T Consensus 75 ~~~~~~~sLtI~~lq~~-Dsg~Y~C~~~~~ 103 (137)
T 3lh2_H 75 DRSTSTAYLELNSLRPE-DTAVYYCAREGT 103 (137)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEEEEE
T ss_pred cCCCCEEEEEECCCChh-hCEEEEEEEEEC
Confidence 45677899999999999 999999998763
No 463
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=97.80 E-value=3.4e-05 Score=49.27 Aligned_cols=39 Identities=10% Similarity=0.086 Sum_probs=31.1
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP 57 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~ 57 (98)
..+|.|.+++.+ |+|.|+|.|.|. .+..+..+.+.|..+
T Consensus 308 ~~~L~I~~v~~~-d~G~Y~C~a~N~---~G~~~~~~~l~V~~~ 346 (347)
T 2ifg_A 308 HGCLRLNQPTHV-NNGNYTLLAANP---FGQASASIMAAFMDN 346 (347)
T ss_dssp EEEEEESSCCGG-GCEEEEEEEEET---TEEEEEEEEECSCCC
T ss_pred ceEEEECCCCcc-cCceEEEEEecC---CCceeeEEEEEecCC
Confidence 567999999999 999999999995 456666666666543
No 464
>2ol3_A BM3.3 T-cell receptor alpha-chain; T cell receptor, class I MHC, H-2KBM8, TCR-PMHC complex, IMM system; HET: NAG; 2.90A {Mus musculus} SCOP: b.1.1.1
Probab=97.79 E-value=3.6e-05 Score=43.79 Aligned_cols=32 Identities=19% Similarity=0.403 Sum_probs=26.6
Q ss_pred EEEE--eCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 6 IIDY--RPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 6 ~~~~--~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
||.+ +...+.++|+|.+++.+ |+|.|.|.+..
T Consensus 62 Rfs~~~~~~~~~~sL~I~~~~~~-Dsg~Y~C~~~~ 95 (142)
T 2ol3_A 62 HYSLNFQKPKSSIGLIITATQIE-DSAVYFCAMRG 95 (142)
T ss_dssp TEEECCBGGGTBCCEEECSCCTT-TCEEEEEEEEC
T ss_pred CEEEEecCCCCEEEEEECCCChh-hCEEEEEEEEc
Confidence 4544 44567789999999999 99999999986
No 465
>2oi9_C V beta, T cell receptor beta chain; TCR, MHC, immune system; 2.35A {Mus musculus} PDB: 2e7l_C
Probab=97.79 E-value=3.5e-05 Score=42.58 Aligned_cols=33 Identities=12% Similarity=0.243 Sum_probs=26.3
Q ss_pred EEEEe-CCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 6 IIDYR-PDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 6 ~~~~~-~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
|+.+. ...+.++|+|.+++.+ |+|.|.|.+...
T Consensus 63 R~~~~~~~~~~~sL~I~~v~~~-DsG~Y~C~~~~~ 96 (121)
T 2oi9_C 63 GYKASRPSQENFSLTLESATPS-QTSVYFCASGGG 96 (121)
T ss_dssp TEEEECCSSSEEEEEESSCCGG-GCEEEEEEEESS
T ss_pred CeEEEcCCCCEEEEEECCCCHH-HCEEEEEEEccC
Confidence 45443 3445789999999999 999999999863
No 466
>1rjc_A 1D2L19, camelid heavy chain antibody; beta sandwich, immunoglobulin fold, protein-protein hetero C alpha-beta orthogonal bundle, immune system-hydrolase compl; 1.40A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 1ri8_A 1xfp_A 1jtt_A 2x6m_A 1zmy_A 1f2x_K
Probab=97.78 E-value=4.1e-05 Score=43.27 Aligned_cols=28 Identities=14% Similarity=0.223 Sum_probs=23.4
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+
T Consensus 73 ~~~~~~~sL~I~~~~~~-Dsg~Y~C~~~~ 100 (137)
T 1rjc_A 73 DNAKNTLYLQMNSLKPE-DTAMYYCAADT 100 (137)
T ss_dssp EC--CEEEEEECSCCGG-GCEEEEEEECC
T ss_pred cCCCCEEEEEECCCCHH-HCEEEEEEEEc
Confidence 34577899999999999 99999999876
No 467
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=97.78 E-value=4.7e-05 Score=39.53 Aligned_cols=37 Identities=11% Similarity=0.294 Sum_probs=27.2
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTV 54 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v 54 (98)
...|.|.+++.+ |+|.|+|.+.+..+ ...+..+.|.|
T Consensus 49 ~~~L~i~~v~~~-d~G~Y~C~a~n~~g--~~~s~~~~l~V 85 (91)
T 3bfo_A 49 KKLYMVPYVDLE-HQGTYWCHVYNDRD--SQDSKKVEIII 85 (91)
T ss_dssp SSEEEESSCCGG-GCEEEEEEEECSSC--EEECCCEEEEE
T ss_pred CCeEEECCCCHH-hCEEEEEEEEcCCC--CEEeeeEEEEE
Confidence 347999999999 99999999998532 22334455555
No 468
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=97.77 E-value=2.6e-05 Score=42.22 Aligned_cols=30 Identities=23% Similarity=0.341 Sum_probs=26.6
Q ss_pred CCceecCCCcEEEEEEcCCCCCCCeEEEEec
Q psy5866 67 ANPVATEGRAIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 67 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
.+..+.+|+.+.|.|.+. |.|.|.+.|+++
T Consensus 21 ~~~~v~~G~~~~l~C~~~-G~P~p~v~W~k~ 50 (107)
T 3knb_B 21 RPVRVVSGAEAELKCVVL-GEPPPVVVWEKG 50 (107)
T ss_dssp CCEEEETTSCEEEEEEEE-EESCCEEEEEET
T ss_pred CcEEEeCCCcEEEEEEEE-EecCCEEEEEEC
Confidence 557889999999999985 899999999975
No 469
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=97.77 E-value=2.6e-05 Score=47.70 Aligned_cols=48 Identities=17% Similarity=0.133 Sum_probs=33.3
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT 56 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~ 56 (98)
|+......+.++|+|.+++.+ |+|.|+|.+.+.. .........|.|..
T Consensus 198 r~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~~~~~~--~~~fg~gt~L~V~~ 245 (256)
T 3umt_A 198 RFSGSRSGSDYSLTISSLESE-DFVDYYCLQYASS--PPTFGGGTKLEIKR 245 (256)
T ss_dssp TEEEEEETTEEEEEECSCCGG-GCSEEEEEECSSS--SCEECCCEEEEEC-
T ss_pred CEEEecCCCEEEEEECCCChh-HCEEEEEEEeeCC--CcEECCCEEEEEEC
Confidence 344444456778999999999 9999999998742 23334456677753
No 470
>2vyr_E Human single domain antibody; zinc, complex, nucleus, human MDM4, immune system, zinc-finger, polymorphism, metal-binding; 2.00A {Homo sapiens} PDB: 1igm_H 2a9n_H* 2a9m_H
Probab=97.77 E-value=5e-05 Score=43.78 Aligned_cols=29 Identities=14% Similarity=0.145 Sum_probs=25.1
Q ss_pred EeCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 9 YRPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 9 ~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
.+...+.++|+|++++.+ |+|.|.|.+..
T Consensus 72 ~~~~~~~~sL~I~~l~~~-Dsg~Y~C~~~~ 100 (153)
T 2vyr_E 72 RDNSKNTLYLQMNSLRTE-DTAVYYCAKPW 100 (153)
T ss_dssp EETTTTEEEEEECSCCGG-GCEEEEEEECS
T ss_pred EcCCCCEEEEEECcCCHH-HCEEEEEEEEe
Confidence 344577899999999999 99999999875
No 471
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.77 E-value=3.2e-05 Score=51.07 Aligned_cols=40 Identities=18% Similarity=0.311 Sum_probs=29.9
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCCC
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQP 60 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~~ 60 (98)
+|+|.+++.+ |+|.|+|.|.+. .+..+..+.+.|..+|.+
T Consensus 398 ~L~I~~v~~~-D~G~Y~C~a~N~---~G~~~~~~~~~v~~~~~~ 437 (440)
T 3zyj_A 398 TLNFTNVTVQ-DTGMYTCMVSNS---VGNTTASATLNVTGTHHH 437 (440)
T ss_dssp CEEESSCCST-TCEEEEEEEECS---SCEEEEEEEEEEC-----
T ss_pred eEEEccCChh-hCEEEEEEEEcC---CCcEEEEEEEEEeccccc
Confidence 5999999999 999999999995 466677777777655543
No 472
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.76 E-value=1e-05 Score=44.01 Aligned_cols=39 Identities=15% Similarity=0.197 Sum_probs=28.9
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ 59 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~ 59 (98)
.+..+|+|.+++.+ |+|.|+|.+. .....+.|.|..+|.
T Consensus 67 ~~~~~L~I~~v~~~-D~G~Y~C~~g-------~~~~~~~L~V~~~p~ 105 (115)
T 2cr6_A 67 GGYHVLTLRQLALK-DSGTIYFEAG-------DQRASAALRVTEKPS 105 (115)
T ss_dssp TTBCCBEECSCCTT-TCEEEEEEET-------TEECCEEEEEECCSS
T ss_pred CCEEEEEEcCCChh-hCEEEEEEEC-------CeeEEEEEEEECCCc
Confidence 45567999999999 9999999932 223346788876554
No 473
>3iy0_H FAB 14, heavy domain; cryoem, neutralizing antibody, parvovirus, canine, feline, FAB footprint, immune system; 12.50A {Mus musculus}
Probab=97.75 E-value=5.9e-05 Score=41.51 Aligned_cols=28 Identities=21% Similarity=0.341 Sum_probs=24.6
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
+...+.++|+|.+++.+ |+|.|.|.+..
T Consensus 73 ~~~~~~~~L~I~~~~~~-Dsg~Y~C~~~~ 100 (120)
T 3iy0_H 73 AAAGGTAYMGLGGLSSE-DSGVYFCARRG 100 (120)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEEES
T ss_pred ecCCCEEEEEECCCChH-HCEEEEEEEEe
Confidence 34567899999999999 99999999875
No 474
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=96.94 E-value=3.9e-06 Score=45.50 Aligned_cols=27 Identities=19% Similarity=0.336 Sum_probs=23.8
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
..+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 67 ~~~~~~L~I~~v~~~-DsG~Y~C~~~~~ 93 (110)
T 1u3h_A 67 REKKLSLHIADSQPG-DSATYFCAASAN 93 (110)
Confidence 556789999999999 999999999863
No 475
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=97.74 E-value=3.2e-05 Score=41.88 Aligned_cols=40 Identities=18% Similarity=0.220 Sum_probs=28.6
Q ss_pred eEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 15 RYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 15 ~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
...|.|.+++.+ |+|.|.|.+.+........+..+.|.|.
T Consensus 59 ~~~l~i~~v~~~-dsG~Y~C~~~~~~~~~~~~S~~l~L~V~ 98 (108)
T 4hwn_A 59 SSEFQIPTASED-HSGSYWCEAATEDNQVWKQSPQLEIRVQ 98 (108)
T ss_dssp CCEEEESSCCGG-GCEEEEEEEECTTSSSEEECCCEEECCB
T ss_pred ccEEEeCccCcc-cCeEEEEEEEeCCCceeccCCCEEEEEE
Confidence 346999999999 9999999999753222344555566554
No 476
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=97.74 E-value=3e-05 Score=40.74 Aligned_cols=31 Identities=16% Similarity=0.320 Sum_probs=26.4
Q ss_pred CCceecCCCcEEEEEEcCCCCCCCeEEEEec
Q psy5866 67 ANPVATEGRAIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 67 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
....+.+|+.+.|.|.+..+.|.+.+.|+++
T Consensus 18 ~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~ 48 (98)
T 1gl4_B 18 RSQSVRPGADVTFICTAKSKSPAYTLVWTRL 48 (98)
T ss_dssp CEEEECTTCCEEEEEEEEESSSCCEEEEEEG
T ss_pred CCeEEecCCCEEEEEeCCCCCCCcEEEEEeC
Confidence 4457899999999999875688999999985
No 477
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=97.73 E-value=3.8e-05 Score=46.30 Aligned_cols=36 Identities=22% Similarity=0.369 Sum_probs=26.8
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTV 52 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l 52 (98)
..|.|.+++.+ |+|.|+|.+.|..+........+.|
T Consensus 213 ~~L~i~~v~~~-D~G~Y~C~a~N~~g~~g~~~~~~~l 248 (250)
T 2fbo_J 213 RNLVIRAAKIT-DAGRVWCELATGQGELDADRSSTIL 248 (250)
T ss_dssp TEEEECSCCGG-GCEEEEEEEESSSSGGGEEEEEEEE
T ss_pred cEEEEecCCcc-cCEEEEEEecCCccccCccceeEEE
Confidence 57999999999 9999999999954433344444443
No 478
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=97.73 E-value=5.6e-05 Score=40.56 Aligned_cols=31 Identities=16% Similarity=0.175 Sum_probs=25.5
Q ss_pred CCCceecCCCcEEEEEEcCCCCCC---CeEEEEec
Q psy5866 66 GANPVATEGRAIELVCSTSGGSPD---PQISVTLQ 97 (98)
Q Consensus 66 ~~~~~~~~g~~~~l~C~~~~~~p~---~~~~W~~~ 97 (98)
.....+.+|+.+.|.|.+. |.|. |.+.|+++
T Consensus 11 p~~~~v~~G~~v~L~C~~~-g~p~~~~p~v~W~k~ 44 (108)
T 3cx2_A 11 PQDGEVTVGGSITFSARVA-GASLLKPPVVKWFKG 44 (108)
T ss_dssp CCCEEEETTCCEEEEEEEE-CC-CCSCCEEEEEET
T ss_pred CCcEEEeCCCCEEEEEEEC-CCccCCCcEEEEccC
Confidence 3567899999999999986 7787 99999985
No 479
>1zvy_A Immunoglobulin heavy chain antibody variable DOMA; beta sandwich, immunoglobulin fold, protein protein heteroco alpha-beta orthogonal bundle, hydrolase-immune system compl; 1.63A {Camelus dromedarius} SCOP: b.1.1.1
Probab=97.72 E-value=3.7e-05 Score=43.43 Aligned_cols=28 Identities=14% Similarity=0.198 Sum_probs=24.7
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
+...+.++|+|.+++.+ |+|.|.|.+.+
T Consensus 73 ~~~~~~~sL~I~~~~~~-Dsg~Y~C~~~~ 100 (136)
T 1zvy_A 73 DKAKNMAYLRMDSVKSE-DTAIYTCGATR 100 (136)
T ss_dssp EGGGTEEEEEECSCCGG-GCEEEEEEECS
T ss_pred cCCCCEEEEEECCCChh-HCEEEEEEEEe
Confidence 34577899999999999 99999999876
No 480
>3dmm_D T-cell surface glycoprotein CD8 beta chain; T cell CO-receptor CD8AB MHC complex, immune response, membrane, MHC I, phosphoprotein, transmembrane; 2.60A {Mus musculus}
Probab=97.72 E-value=0.00011 Score=42.08 Aligned_cols=43 Identities=26% Similarity=0.221 Sum_probs=31.1
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
+...+.++|+|.+++.+ |+|.|.|.+.... .........|.|.
T Consensus 76 ~~~~~~~sL~I~~l~~~-Dsg~Y~C~~~~~~--~~~fG~GT~L~V~ 118 (150)
T 3dmm_D 76 SSDSRRPFLSIMNVKPE-DSDFYFCATVGSP--KMVFGTGTKLTVV 118 (150)
T ss_dssp STTSSSCEEEESSCCGG-GCEEEEEEEECSS--CEEECCCEEEEEE
T ss_pred cCCCCEEEEEECCCChh-hCEEEEEEEecCC--cceECCCEEEEEe
Confidence 36677899999999999 9999999997531 2222233456665
No 481
>3tpk_A Immunoglobulin heavy chain antibody variable DOMA; immunoglobulin heavy chain domains, VHH, complementarity DET regions, CDR, oligomer-specific; 1.30A {Camelidae} PDB: 3ln9_A* 1zv5_A
Probab=97.71 E-value=6.9e-05 Score=42.31 Aligned_cols=29 Identities=17% Similarity=0.203 Sum_probs=25.0
Q ss_pred EeCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 9 YRPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 9 ~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
.+...+.++|+|.+++.+ |+|.|.|.+..
T Consensus 76 ~~~~~~~~sL~I~~~~~~-Dsg~Y~C~~~~ 104 (136)
T 3tpk_A 76 QDNAKNTVYLQMNNLKPE-DTAMYYCAAAP 104 (136)
T ss_dssp EETTTTEEEEEECSCCGG-GCEEEEEEEES
T ss_pred EcCCCCEEEEEECCCChh-hCEEEEEEEEe
Confidence 344567899999999999 99999999876
No 482
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=97.71 E-value=5.4e-05 Score=43.86 Aligned_cols=38 Identities=26% Similarity=0.355 Sum_probs=28.5
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeee-EeeEEEEEECCC
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLH-SQVYTVTVLTPP 58 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~-~~~~~l~v~~~~ 58 (98)
+|.|.+++.+ |+|.|+|.+.+. .+.. +..+.|.|..+|
T Consensus 154 ~L~i~~~~~~-d~G~Y~C~a~n~---~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 154 SLRIHNVQKE-DAGQYRCVAKNS---LGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp CEEESSCCGG-GCEEEEEEEEET---TEEEECCCEEEEEEC--
T ss_pred cEEEecCChh-hCEEEEEEEEcC---CCcEEEEEEEEEEEeCC
Confidence 5999999999 999999999995 3333 445777776543
No 483
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=97.71 E-value=2.4e-05 Score=47.96 Aligned_cols=27 Identities=26% Similarity=0.326 Sum_probs=23.8
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
..+.++|+|.+++.+ |+|.|+|.+.+.
T Consensus 205 ~~~~~~L~I~~v~~~-D~G~Y~C~a~n~ 231 (257)
T 1f3r_B 205 SGTDYTLTISSLQPE-DVATYFCYQYNN 231 (257)
T ss_dssp EBTEEEEEECSCCGG-GCSEEEEEEESS
T ss_pred CCCEEEEEECCCChh-hCEEEEEEEeCC
Confidence 345678999999999 999999999984
No 484
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=97.70 E-value=4.7e-05 Score=39.64 Aligned_cols=30 Identities=23% Similarity=0.285 Sum_probs=26.2
Q ss_pred CCceecCCCcEEEEEEcCCCCCCCeEEEEec
Q psy5866 67 ANPVATEGRAIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 67 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
....+.+|+.+.|.|.+. |.|.|.+.|+++
T Consensus 10 ~~~~v~~G~~~~l~C~~~-g~P~p~i~W~k~ 39 (93)
T 1wit_A 10 RKIKIKAGFTHNLEVDFI-GAPDPTATWTVG 39 (93)
T ss_dssp CEEEECTTBCCEEEEEEE-CCSSCEEEEECS
T ss_pred CceEEeCCCEEEEEEEEE-EcCCCEEEEEEC
Confidence 456788999999999986 899999999975
No 485
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=97.70 E-value=5.1e-05 Score=44.57 Aligned_cols=41 Identities=22% Similarity=0.345 Sum_probs=29.4
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECCCC
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQ 59 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~~~ 59 (98)
.+|.|.+++.+ |+|.|+|.+.|..+ ...+..+.|.|..++.
T Consensus 163 ~~L~i~~v~~~-d~G~Y~C~a~N~~g--~~~s~~~~l~v~~~~~ 203 (208)
T 3r4d_A 163 SILRIDPIKRE-DAGEYQCEISNPVS--VRRSNSIKLDIIFDPH 203 (208)
T ss_dssp TEEEESSCCGG-GCEEEEEEEECTTC--CEECCCEEECCC----
T ss_pred CEEEEeccCHH-hCeEEEEEEecCCC--cccCCceeeeEEeCCc
Confidence 46999999999 99999999999632 3445567777665544
No 486
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=97.70 E-value=2.4e-05 Score=42.55 Aligned_cols=32 Identities=13% Similarity=0.095 Sum_probs=25.0
Q ss_pred eEEEEeCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 5 EIIDYRPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 5 ~~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
.|+......++ +|+|.+++.+ |+|.|.|.+..
T Consensus 64 ~Rf~~~~~~~~-~L~I~~~~~~-Dsg~Y~C~~~~ 95 (112)
T 1fo0_B 64 ADYLATRVTDT-ELRLQVANMS-QGRTLYCTCSA 95 (112)
T ss_dssp EEEEEEEEETT-EEEEEEESCC-SCEEEEEEEES
T ss_pred CCEEEEcCCCC-eEEEcCCCHh-HCEEEEEEEEc
Confidence 45555433334 8999999999 99999999975
No 487
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=97.69 E-value=4.5e-05 Score=46.85 Aligned_cols=42 Identities=17% Similarity=0.150 Sum_probs=30.7
Q ss_pred CCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEEC
Q psy5866 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLT 56 (98)
Q Consensus 12 ~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~ 56 (98)
....++|+|.+++.+ |+|.|+|.+.+.. .........|.|..
T Consensus 192 ~~~~~~L~I~~v~~~-DsG~Y~C~a~~~~--~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 192 SGTDFTLKISRVEAE-DLGVYYCFQGSHV--PYTFGGGTKLEIKR 233 (256)
T ss_dssp ETTEEEEEESSCCGG-GCEEEEEEECSSS--SCEECCCEEEEECC
T ss_pred cCCEEEEEECCCChH-HCEEEEEEEccCC--ceEECCCEEEEEEC
Confidence 445678999999999 9999999998732 23334445677753
No 488
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=97.69 E-value=0.0001 Score=40.55 Aligned_cols=38 Identities=24% Similarity=0.393 Sum_probs=29.0
Q ss_pred CeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEE
Q psy5866 14 GRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTV 54 (98)
Q Consensus 14 ~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v 54 (98)
..+.|++.+|..+ |+|.|+|.|.+.. ....+....|.|
T Consensus 77 s~fiL~f~~V~~s-DsG~YrCsAn~~~--g~ieSHs~ti~V 114 (122)
T 1xau_A 77 PVFVLHFKPIHLS-DNGSYSCSTNFNS--QVINSHSVTIHV 114 (122)
T ss_dssp CEEEEEETTCCGG-GCEEEEEEEEETT--EEEECCCEEEEE
T ss_pred eeEEEEEeeEEEc-CCccEEEEeeCCC--CceeeeEEEEEE
Confidence 4678999999999 9999999999952 234444455555
No 489
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=97.68 E-value=0.00011 Score=43.52 Aligned_cols=40 Identities=25% Similarity=0.282 Sum_probs=29.3
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeeeEe-eEEEEEECCCCC
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLHSQ-VYTVTVLTPPQP 60 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~-~~~l~v~~~~~~ 60 (98)
.|.|.+++.+ |+|.|+|.+.|. .+.... .+.|.|......
T Consensus 164 ~L~i~~v~~~-d~G~Y~C~a~N~---~G~~~s~~~~l~V~~~~~~ 204 (212)
T 2yd1_A 164 FLQIENSREE-DQGKYECVAENS---MGTEHSKATNLYVKVRRVG 204 (212)
T ss_dssp EEEECSCCGG-GCEEEEEEEEET---TEEEECCCEEEEEEC---C
T ss_pred eEEEccCChh-hCEEEEEEeecC---CCceeEEEEEEEEEecccc
Confidence 6999999999 999999999995 344433 378888755443
No 490
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=97.68 E-value=0.0001 Score=43.28 Aligned_cols=39 Identities=31% Similarity=0.428 Sum_probs=28.7
Q ss_pred EEEEccceeeccCeEEEEEEEECCCCCeee-EeeEEEEEECCCC
Q psy5866 17 DLIISNASFERDNGKFECRLKAAGSGQDLH-SQVYTVTVLTPPQ 59 (98)
Q Consensus 17 ~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~-~~~~~l~v~~~~~ 59 (98)
.|.|.+++.+ |+|.|+|.+.|. .+.. +..+.|.|..+|.
T Consensus 166 ~L~i~~~~~~-d~G~Y~C~a~N~---~g~~~s~~~~l~V~~~P~ 205 (212)
T 2v9r_A 166 KLMITYTRKS-DAGKYVCVGTNM---VGERESEVAELTVLERPS 205 (212)
T ss_dssp EEEESSCCGG-GCEEEEEEEEET---TEEEECCCEEEEEEC---
T ss_pred eEEEeeCCHh-hCeeEEEEEecc---cCceecceEEEEEEeCch
Confidence 6999999999 999999999995 3332 3347888876554
No 491
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=97.66 E-value=3.2e-05 Score=42.27 Aligned_cols=26 Identities=27% Similarity=0.405 Sum_probs=23.2
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
.+.++|+|.+++.+ |+|.|.|.+.+.
T Consensus 75 ~~~~~L~I~~v~~~-DsG~Y~C~~~~~ 100 (120)
T 2yz1_A 75 NMDFSIRISNVTPE-DAGTYYCVKFQK 100 (120)
T ss_dssp TTBCCEEECSCCGG-GCEEEEEEEEEC
T ss_pred CCeEEEEECCCCHH-HCEEEEEEEEcC
Confidence 45678999999999 999999999874
No 492
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=97.66 E-value=0.00016 Score=42.03 Aligned_cols=36 Identities=25% Similarity=0.341 Sum_probs=29.2
Q ss_pred EEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEE
Q psy5866 16 YDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVL 55 (98)
Q Consensus 16 ~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~ 55 (98)
..|.|.++..+ |+|.|+|.+.|. .+..+..+.|.|.
T Consensus 165 ~~L~i~~v~~~-d~G~Y~C~a~n~---~g~~~~~~~l~V~ 200 (201)
T 3s97_C 165 AVLKIFNIQLE-DEGIYECEAENI---RGKDKHQARIYVQ 200 (201)
T ss_dssp TEEEECSCCGG-GCEEEEEEEEET---TEEEEEEEEEEEE
T ss_pred CEEEEccCChh-hCEEEEEEEEec---CCceeeeEEEEEe
Confidence 47999999999 999999999995 4555666666664
No 493
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=97.65 E-value=5.5e-05 Score=46.23 Aligned_cols=33 Identities=18% Similarity=0.256 Sum_probs=26.2
Q ss_pred EEEEeCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 6 ~~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
++........++|+|.+++.+ |+|.|.|.+.+.
T Consensus 210 r~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~ 242 (256)
T 3juy_B 210 RFSGSGSGTDFTLTITRVEPE-DFALYYCQVYGA 242 (256)
T ss_dssp TEEEEEETTEEEEEESSCCGG-GCSEEEEEECCS
T ss_pred cEEEEccCCEEEEEECCCCHh-HCEEEEEEEeeC
Confidence 334334456778999999999 999999999874
No 494
>3r8b_B G5-8, enterotoxin type B; immunoglobulin-like, OB-fold, toxin-immune system complex; 2.95A {Rattus norvegicus}
Probab=97.65 E-value=0.00021 Score=39.59 Aligned_cols=26 Identities=15% Similarity=0.304 Sum_probs=23.6
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
.+.++|+|.+++.+ |+|.|.|.+...
T Consensus 76 ~~~~sL~I~~~~~~-Dsg~Y~C~~~~~ 101 (125)
T 3r8b_B 76 QENFSLILELATPS-QTSVYFCASGGG 101 (125)
T ss_dssp TTEEEEEETTCCGG-GCEEEEEEEEET
T ss_pred CCEEEEEECCCChh-hCEEEEEEEcCC
Confidence 56899999999999 999999998763
No 495
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=97.65 E-value=8.9e-05 Score=45.17 Aligned_cols=29 Identities=14% Similarity=0.174 Sum_probs=25.0
Q ss_pred eCCCCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 10 RPDSGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 10 ~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
+...+.++|+|.+++.+ |+|.|+|.+.+.
T Consensus 207 ~~~~~~~~L~I~~v~~~-DsG~Y~C~~~~~ 235 (256)
T 3ux9_B 207 DNSKNTLYLQMNSLRAE-DTAVYYCARYID 235 (256)
T ss_dssp ETTTTEEEEEECSCCGG-GCEEEEEEEEET
T ss_pred cCCCCEEEEEECCCChh-hCEEEEEEEEcC
Confidence 34466788999999999 999999999984
No 496
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.65 E-value=8.2e-05 Score=39.11 Aligned_cols=38 Identities=32% Similarity=0.417 Sum_probs=29.5
Q ss_pred CCCEE-eCCCCceecCCCcEEEEEEcCCCCCCCeEEEEec
Q psy5866 59 QPPKI-SPGANPVATEGRAIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 59 ~~p~i-~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
.+|.+ .......+.+|+.+.|.|.+. |.|.+.+.|+++
T Consensus 7 ~~P~i~~~p~~~~v~~G~~~~l~C~~~-g~p~p~v~W~~~ 45 (100)
T 2edj_A 7 GPPIILQGPANQTLAVDGTALLKCKAT-GDPLPVISWLKE 45 (100)
T ss_dssp SSCEEEECCCCEEEESSSEEEECCEEE-CSSCCEEEEEES
T ss_pred CCCEEEeCcCCEEEcCCCcEEEEEEEE-EcCCCEEEEEEC
Confidence 34555 223456888999999999986 789999999975
No 497
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=97.64 E-value=3.9e-05 Score=40.88 Aligned_cols=30 Identities=37% Similarity=0.629 Sum_probs=22.8
Q ss_pred CCceecCCCcEEEEEEcCCCCCCCeEEEEec
Q psy5866 67 ANPVATEGRAIELVCSTSGGSPDPQISVTLQ 97 (98)
Q Consensus 67 ~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~ 97 (98)
....+.+|+.+.|.|.+. |.|.+.+.|+++
T Consensus 18 ~~~~v~~G~~v~l~C~~~-g~p~p~i~W~~~ 47 (108)
T 3kvq_A 18 ENQTTSIGESIEVSCTAS-GNPPPQIMWFKD 47 (108)
T ss_dssp CCEEEETTCCEEEECBCC-----CCEEEEES
T ss_pred CCeEEeCCCeEEEEEECc-CcCCCeEEEEEC
Confidence 567889999999999985 788999999975
No 498
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.64 E-value=5.1e-05 Score=44.42 Aligned_cols=26 Identities=8% Similarity=0.185 Sum_probs=23.0
Q ss_pred CCeEEEEEccceeeccCeEEEEEEEEC
Q psy5866 13 SGRYDLIISNASFERDNGKFECRLKAA 39 (98)
Q Consensus 13 ~~~~~l~I~~v~~~~d~G~y~C~~~~~ 39 (98)
.....|.|.+++.+ |+|.|+|.+.+.
T Consensus 146 ~~~~~L~I~~v~~~-d~G~Y~C~a~n~ 171 (188)
T 1oll_A 146 KVQAEFPLGPVTTA-HRGTYRCFGSYN 171 (188)
T ss_dssp SSEEEEEEEECCGG-GCEEEEEECEEE
T ss_pred CceeEEEECCCCcC-CCcEEEEEEEcC
Confidence 45678999999999 999999999885
No 499
>3k81_A Single strand antibody VHH domain; krepa6, single domain antibody, immune system, RNA BIND protein; 3.40A {Lama glama}
Probab=97.63 E-value=6.4e-05 Score=42.08 Aligned_cols=29 Identities=14% Similarity=0.162 Sum_probs=24.7
Q ss_pred EeCCCCeEEEEEccceeeccCeEEEEEEEE
Q psy5866 9 YRPDSGRYDLIISNASFERDNGKFECRLKA 38 (98)
Q Consensus 9 ~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~ 38 (98)
.+...+.++|+|.+++.+ |+|.|.|.+..
T Consensus 71 ~~~~~~~~sL~I~~lq~~-Dsg~Y~Ca~~~ 99 (127)
T 3k81_A 71 RDNAKNVMYLQMNSLKPE-DTAVYYCNANL 99 (127)
T ss_dssp EETTTTEEEEEEESBCTT-TCEEEEEECCC
T ss_pred EcCCCCEEEEEECCCChh-hCEEEEEEEee
Confidence 344567899999999999 99999998864
No 500
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.63 E-value=5.9e-05 Score=46.91 Aligned_cols=48 Identities=15% Similarity=0.176 Sum_probs=32.2
Q ss_pred EEEeCCCCeEEEEEccceeeccCeEEEEEEEECCCCCeeeEeeEEEEEECC
Q psy5866 7 IDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTP 57 (98)
Q Consensus 7 ~~~~~~~~~~~l~I~~v~~~~d~G~y~C~~~~~~~~~~~~~~~~~l~v~~~ 57 (98)
+......+.++|+|.+++.+ |+|.|+|.+.+.. .........|.|...
T Consensus 222 ~~~~~~~~~~~L~I~~v~~~-DsG~Y~C~a~~~~--~~~fg~gt~l~V~~~ 269 (282)
T 1qok_A 222 FSGSGSGTSYSLTISRMEAE-DAATYYCQQRSSY--PLTFGAGTKLELKRA 269 (282)
T ss_dssp EEEEEETTEEEEEESSCCGG-GCEEEEEEECSSS--SCEECCCEEEEEC--
T ss_pred eEEecCCCEEEEEEccCChh-HCEEEEEEEeeCC--CceEeCCEEEEEecc
Confidence 33333456778999999999 9999999998631 233344466777533
Done!