Your job contains 1 sequence.
>psy5866
MDKVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQP
PKISPGANPVATEGRAIELVCSTSGGSPDPQISVTLQV
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5866
(98 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0000547 - symbol:ed "echinoid" species:7227 "Droso... 284 1.7e-23 1
FB|FBgn0051774 - symbol:fred "friend of echinoid" species... 281 3.9e-23 1
FB|FBgn0028369 - symbol:kirre "kin of irre" species:7227 ... 131 2.3e-07 1
FB|FBgn0003285 - symbol:rst "roughest" species:7227 "Dros... 125 7.5e-07 1
UNIPROTKB|E1BZW0 - symbol:Gga.29966 "Uncharacterized prot... 89 9.7e-06 2
WB|WBGene00018215 - symbol:igcm-1 species:6239 "Caenorhab... 106 0.00012 1
UNIPROTKB|E1BZV9 - symbol:Gga.29966 "Uncharacterized prot... 87 0.00016 2
UNIPROTKB|E1BV59 - symbol:Gga.29966 "Uncharacterized prot... 87 0.00017 2
UNIPROTKB|E1C4V8 - symbol:JAM2 "Uncharacterized protein" ... 97 0.00019 1
MGI|MGI:1321398 - symbol:F11r "F11 receptor" species:1009... 97 0.00020 1
UNIPROTKB|E2RN46 - symbol:PVRL4 "Uncharacterized protein"... 99 0.00021 1
MGI|MGI:1891703 - symbol:Gpa33 "glycoprotein A33 (transme... 97 0.00022 1
UNIPROTKB|A4IFI9 - symbol:JAM2 "Uncharacterized protein" ... 96 0.00025 1
UNIPROTKB|F1S190 - symbol:LOC100737066 "Uncharacterized p... 99 0.00026 1
UNIPROTKB|K7GKP7 - symbol:LOC100737066 "Uncharacterized p... 99 0.00027 1
UNIPROTKB|Q96NY8 - symbol:PVRL4 "Poliovirus receptor-rela... 99 0.00027 1
UNIPROTKB|I3L5V3 - symbol:LOC100737066 "Uncharacterized p... 99 0.00027 1
UNIPROTKB|I3LLB5 - symbol:I3LLB5 "Uncharacterized protein... 99 0.00027 1
UNIPROTKB|E2R8A4 - symbol:JAM2 "Uncharacterized protein" ... 95 0.00032 1
RGD|1559826 - symbol:Pvrl4 "poliovirus receptor-related 4... 98 0.00032 1
ZFIN|ZDB-GENE-040822-27 - symbol:negr1 "neuronal growth r... 96 0.00032 1
RGD|1306711 - symbol:Gpa33 "glycoprotein A33 (transmembra... 95 0.00034 1
UNIPROTKB|E1BPL4 - symbol:KIRREL2 "Uncharacterized protei... 99 0.00041 1
UNIPROTKB|P57087 - symbol:JAM2 "Junctional adhesion molec... 94 0.00041 1
RGD|621842 - symbol:F11r "F11 receptor" species:10116 "Ra... 94 0.00042 1
MGI|MGI:1918990 - symbol:Pvrl4 "poliovirus receptor-relat... 97 0.00044 1
UNIPROTKB|A6QLR1 - symbol:PVRL4 "Poliovirus receptor-rela... 97 0.00044 1
RGD|1311610 - symbol:Cd22 "CD22 molecule" species:10116 "... 99 0.00051 1
UNIPROTKB|Q92854 - symbol:SEMA4D "Semaphorin-4D" species:... 88 0.00052 2
UNIPROTKB|Q5E9Z9 - symbol:PVRL4 "Poliovirus receptor-rela... 95 0.00072 1
ZFIN|ZDB-GENE-041114-138 - symbol:cadm4 "cell adhesion mo... 93 0.00089 1
>FB|FBgn0000547 [details] [associations]
symbol:ed "echinoid" species:7227 "Drosophila melanogaster"
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=IMP;IPI] [GO:0042059 "negative regulation of epidermal
growth factor receptor signaling pathway" evidence=IGI;NAS;IMP]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007155 "cell adhesion"
evidence=ISS] [GO:0050768 "negative regulation of neurogenesis"
evidence=IMP] [GO:0007423 "sensory organ development" evidence=IMP]
[GO:0007156 "homophilic cell adhesion" evidence=IMP;IDA]
[GO:0016337 "cell-cell adhesion" evidence=IMP] [GO:0005913
"cell-cell adherens junction" evidence=IDA] [GO:0008360 "regulation
of cell shape" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048644 "muscle organ morphogenesis"
evidence=IMP] [GO:0030038 "contractile actin filament bundle
assembly" evidence=IMP] [GO:0007391 "dorsal closure" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0046843 "dorsal appendage formation" evidence=IMP] [GO:0007476
"imaginal disc-derived wing morphogenesis" evidence=IMP]
[GO:0016319 "mushroom body development" evidence=IMP] [GO:0002121
"inter-male aggressive behavior" evidence=IMP] [GO:0035157
"negative regulation of fusion cell fate specification"
evidence=IMP] [GO:0035147 "branch fusion, open tracheal system"
evidence=IMP] [GO:0005912 "adherens junction" evidence=IDA]
[GO:0032956 "regulation of actin cytoskeleton organization"
evidence=IMP] [GO:0046331 "lateral inhibition" evidence=IMP]
[GO:0090138 "regulation of actin cytoskeleton organization by
cell-cell adhesion" evidence=IMP] [GO:0035330 "regulation of hippo
signaling cascade" evidence=IPI] [GO:0035331 "negative regulation
of hippo signaling cascade" evidence=IGI] [GO:0046621 "negative
regulation of organ growth" evidence=IMP] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 GO:GO:0007173
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0007423 GO:GO:0008360
GO:GO:0048644 GO:GO:0007391 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0005913
GO:GO:0002121 GO:GO:0016319 GO:GO:0046331 GO:GO:0035331
InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156 GO:GO:0007476
GO:GO:0046621 GO:GO:0042059 GO:GO:0050768 GO:GO:0046843
GO:GO:0035147 InterPro:IPR013162 Pfam:PF08205 GO:GO:0035157
GO:GO:0090138 GO:GO:0030038 HSSP:Q10466 FlyBase:FBgn0000547
EMBL:AF275903 ProteinModelPortal:Q9BN17 MINT:MINT-2843290
STRING:Q9BN17 PRIDE:Q9BN17 InParanoid:Q9BN17 ArrayExpress:Q9BN17
Bgee:Q9BN17 Uniprot:Q9BN17
Length = 1332
Score = 284 (105.0 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 50/87 (57%), Positives = 66/87 (75%)
Query: 7 IDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPG 66
+D++P+ G YDL I N S+ RDNG+FECR+KA G+G D+H + + +TVLTPP PP ISPG
Sbjct: 99 LDFQPERGIYDLQIKNVSYNRDNGRFECRIKAKGTGADVHQEFHNLTVLTPPHPPVISPG 158
Query: 67 ANPVATEGRAIELVCSTSGGSPDPQIS 93
VATE + +EL CS+ GGSPDP I+
Sbjct: 159 NIAVATEDKPMELTCSSIGGSPDPTIT 185
>FB|FBgn0051774 [details] [associations]
symbol:fred "friend of echinoid" species:7227 "Drosophila
melanogaster" [GO:0042059 "negative regulation of epidermal growth
factor receptor signaling pathway" evidence=NAS] [GO:0001745
"compound eye morphogenesis" evidence=IMP] [GO:0007423 "sensory
organ development" evidence=IMP] [GO:0035018 "adult chitin-based
cuticle pattern formation" evidence=IMP] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014134 GO:GO:0016020 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR013162 Pfam:PF08205
GO:GO:0001745 RefSeq:NP_608812.3 ProteinModelPortal:B7Z015
SMR:B7Z015 STRING:B7Z015 GeneID:33613 KEGG:dme:Dmel_CG31774
CTD:33613 FlyBase:FBgn0051774 eggNOG:NOG263668 OrthoDB:EOG49ZW43
GenomeRNAi:33613 NextBio:784453 Bgee:B7Z015 GO:GO:0035018
Uniprot:B7Z015
Length = 1442
Score = 281 (104.0 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 49/87 (56%), Positives = 64/87 (73%)
Query: 7 IDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPG 66
+D+RP G YDL I N S+ RDNG+FECR+KA G+G D+H + Y +TVLT P PP ++PG
Sbjct: 73 LDFRPSRGIYDLQIKNTSYNRDNGRFECRIKAKGTGADVHQEFYNLTVLTAPHPPMVTPG 132
Query: 67 ANPVATEGRAIELVCSTSGGSPDPQIS 93
VATE + +EL CS+ GGSPDP I+
Sbjct: 133 NLAVATEEKPLELTCSSIGGSPDPMIT 159
>FB|FBgn0028369 [details] [associations]
symbol:kirre "kin of irre" species:7227 "Drosophila
melanogaster" [GO:0005886 "plasma membrane" evidence=IDA;NAS]
[GO:0007520 "myoblast fusion" evidence=IMP;NAS;TAS] [GO:0016202
"regulation of striated muscle tissue development"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007523 "larval visceral muscle development" evidence=IMP]
[GO:0007157 "heterophilic cell-cell adhesion" evidence=IMP]
[GO:0007156 "homophilic cell adhesion" evidence=IGI;IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0005912 "adherens
junction" evidence=IDA] [GO:0097206 "nephrocyte filtration"
evidence=IMP] [GO:0036059 "nephrocyte diaphragm assembly"
evidence=IMP] [GO:0005917 "nephrocyte diaphragm" evidence=IDA]
[GO:0050839 "cell adhesion molecule binding" evidence=IPI]
[GO:0061321 "garland nephrocyte differentiation" evidence=IMP]
[GO:0001745 "compound eye morphogenesis" evidence=IMP]
InterPro:IPR007110 PROSITE:PS50835 GO:GO:0005886 GO:GO:0009986
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 GO:GO:0005912 GO:GO:0007520 GO:GO:0007157
InterPro:IPR013098 Pfam:PF07679 HSSP:P56276 GO:GO:0007156
InterPro:IPR013106 Pfam:PF07686 InterPro:IPR013162 Pfam:PF08205
GO:GO:0016202 GO:GO:0001745 GO:GO:0007523 OrthoDB:EOG441NSF
EMBL:AL035436 GO:GO:0061321 GO:GO:0005917 GO:GO:0036059
GO:GO:0097206 ProteinModelPortal:O97174 SMR:O97174 STRING:O97174
PRIDE:O97174 FlyBase:FBgn0028369 InParanoid:O97174 Bgee:O97174
Uniprot:O97174
Length = 975
Score = 131 (51.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 30/83 (36%), Positives = 46/83 (55%)
Query: 12 DSGRYDLIISNASFERDNGKFECRLKAAGSG-QDLHSQVYTVTVLTPPQPPKISPGANPV 70
+ G + L I + D+ K++C++ G Q + S+ +TVL PP+ PKI+ G V
Sbjct: 140 EEGDFSLDIYPLMLD-DDAKYQCQVGPGPQGEQGIRSRFAKLTVLVPPEAPKITQGDYLV 198
Query: 71 ATEGRAIELVCSTSGGSPDPQIS 93
TE R IEL C + GG P +I+
Sbjct: 199 TTEDREIELECVSQGGKPAAEIT 221
>FB|FBgn0003285 [details] [associations]
symbol:rst "roughest" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS;IDA;NAS] [GO:0016202
"regulation of striated muscle tissue development" evidence=IMP]
[GO:0046667 "compound eye retinal cell programmed cell death"
evidence=NAS;TAS] [GO:0007156 "homophilic cell adhesion"
evidence=IGI;TAS] [GO:0007520 "myoblast fusion" evidence=TAS]
[GO:0016021 "integral to membrane" evidence=NAS;TAS] [GO:0046666
"retinal cell programmed cell death" evidence=TAS] [GO:0007409
"axonogenesis" evidence=NAS] [GO:0048749 "compound eye development"
evidence=IMP] [GO:0030165 "PDZ domain binding" evidence=IPI]
[GO:0001745 "compound eye morphogenesis" evidence=IMP] [GO:0045177
"apical part of cell" evidence=IDA] [GO:0046331 "lateral
inhibition" evidence=IMP] InterPro:IPR007110 PROSITE:PS50835
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:AE014298 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0045177 GO:GO:0007520 GO:GO:0046331
InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156 GO:GO:0046667
MEROPS:I43.001 InterPro:IPR013162 Pfam:PF08205 GO:GO:0016202
EMBL:Z21641 EMBL:L11040 EMBL:AY128456 EMBL:BT057980 EMBL:DQ277015
EMBL:DQ277016 EMBL:DQ277017 EMBL:DQ277018 EMBL:DQ277019
EMBL:DQ277020 EMBL:DQ277021 EMBL:DQ277022 EMBL:DQ277023
EMBL:DQ277024 EMBL:DQ277025 EMBL:DQ277026 EMBL:DQ277027
EMBL:DQ277028 EMBL:DQ277029 EMBL:DQ277030 EMBL:DQ277031
EMBL:DQ277032 EMBL:DQ277033 EMBL:DQ277034 EMBL:DQ277035
EMBL:DQ277036 EMBL:DQ277037 EMBL:DQ277038 EMBL:DQ277039
EMBL:DQ277040 EMBL:DQ277041 EMBL:DQ277042 EMBL:DQ277043
EMBL:DQ277044 EMBL:DQ277045 EMBL:DQ277046 EMBL:DQ277047
EMBL:DQ277048 EMBL:DQ277049 EMBL:DQ277050 EMBL:DQ277051
EMBL:DQ277052 EMBL:DQ277053 PIR:A49448 RefSeq:NP_525058.2
UniGene:Dm.1692 ProteinModelPortal:Q08180 SMR:Q08180 DIP:DIP-18314N
MINT:MINT-768543 STRING:Q08180 PaxDb:Q08180
EnsemblMetazoa:FBtr0070562 GeneID:31290 KEGG:dme:Dmel_CG4125
CTD:31290 FlyBase:FBgn0003285 eggNOG:NOG295274
GeneTree:ENSGT00550000074545 InParanoid:Q2VA88 OMA:LECEAFS
OrthoDB:EOG441NSF PhylomeDB:Q08180 GenomeRNAi:31290 NextBio:772881
Bgee:Q08180 GermOnline:CG4125 Uniprot:Q08180
Length = 764
Score = 125 (49.1 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 12 DSGRYDLIISNASFERDNGKFECRLKAAGSGQD-LHSQVYTVTVLTPPQPPKISPGANPV 70
+ G Y L I + D+ +++C++ GQ + S +TVL PP+ PKI+ G
Sbjct: 86 EEGDYSLDIYPVMLD-DDARYQCQVSPGPEGQPAIRSTFAGLTVLVPPEAPKITQGDVIY 144
Query: 71 ATEGRAIELVCSTSGGSPDPQIS 93
ATE R +E+ C + GG P +I+
Sbjct: 145 ATEDRKVEIECVSVGGKPAAEIT 167
>UNIPROTKB|E1BZW0 [details] [associations]
symbol:Gga.29966 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004908 "interleukin-1 receptor activity"
evidence=IEA] InterPro:IPR004074 InterPro:IPR007110 PRINTS:PR01536
PROSITE:PS50835 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR015621
PANTHER:PTHR11890 GeneTree:ENSGT00680000099639 GO:GO:0004908
EMBL:AADN02017766 IPI:IPI00821292 Ensembl:ENSGALT00000036576
ArrayExpress:E1BZW0 Uniprot:E1BZW0
Length = 256
Score = 89 (36.4 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 17 DLIISNASFERDNGKFECRLKAAGSGQ--DLHSQVYTVTVLTPPQ-PPKIS-PGANPVAT 72
DL+I N + + D G + C+ +G+ D+ + + ++PP+ PP+IS P N +
Sbjct: 154 DLVIFNVTVQ-DQGNYTCKTTYTYNGKQYDIARDISLIVEVSPPKMPPEISYPQNNSIEV 212
Query: 73 E-GRAIELVCSTSG 85
E G + + C+T+G
Sbjct: 213 ELGSEVTVDCNTTG 226
Score = 36 (17.7 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 12 DSGRYDLIISN 22
DSG Y+ +I N
Sbjct: 67 DSGNYECVIRN 77
>WB|WBGene00018215 [details] [associations]
symbol:igcm-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016020
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR013162
Pfam:PF08205 InterPro:IPR013270 Pfam:PF08204
GeneTree:ENSGT00550000074545 eggNOG:NOG263668 EMBL:FO081219
RefSeq:NP_508166.1 HSSP:Q96KP7 ProteinModelPortal:Q9TXI8 SMR:Q9TXI8
PaxDb:Q9TXI8 EnsemblMetazoa:F39H12.4 GeneID:180433
KEGG:cel:CELE_F39H12.4 UCSC:F39H12.4 CTD:180433 WormBase:F39H12.4
HOGENOM:HOG000018467 InParanoid:Q9TXI8 OMA:DACTLLY NextBio:909352
Uniprot:Q9TXI8
Length = 1073
Score = 106 (42.4 bits), Expect = 0.00012, P = 0.00012
Identities = 27/91 (29%), Positives = 39/91 (42%)
Query: 6 IIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISP 65
I++ +G Y L I+ G + C + +S + TV VL PP P IS
Sbjct: 91 ILENDSATGNYSLRITEVEKNSVEGTYHCNVIGTDDSDVQYSALATVVVLVPPGDPIIST 150
Query: 66 GANPVATEGRAIELVCSTSGGSPDPQISVTL 96
+ EG + C + GGSP P + TL
Sbjct: 151 TPSESVIEGDFMTAKCVSVGGSPQPTFTWTL 181
>UNIPROTKB|E1BZV9 [details] [associations]
symbol:Gga.29966 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004909 "interleukin-1, Type I, activating
receptor activity" evidence=IEA] InterPro:IPR000157
InterPro:IPR004074 InterPro:IPR004076 InterPro:IPR007110
Pfam:PF01582 PRINTS:PR01536 PRINTS:PR01538 PROSITE:PS50104
PROSITE:PS50835 SMART:SM00255 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409 GO:GO:0045087
GO:GO:0005622 GO:GO:0070498 InterPro:IPR015621 PANTHER:PTHR11890
SUPFAM:SSF52200 GeneTree:ENSGT00680000099639 GO:GO:0004909
EMBL:AADN02017766 IPI:IPI00822349 Ensembl:ENSGALT00000036577
ArrayExpress:E1BZV9 Uniprot:E1BZV9
Length = 569
Score = 87 (35.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 17 DLIISNASFERDNGKFECRLKAAGSGQ--DLHSQV-YTVTVLTPPQ-PPKIS-PGANPVA 71
DL+I N + + D G + C+ +G+ D+ + V V++PP+ PP+IS P N +
Sbjct: 182 DLVIFNVTVQ-DQGNYTCKTTYTYNGKQYDIARDISLIVEVVSPPKMPPEISYPQNNSIE 240
Query: 72 TE-GRAIELVCSTSG 85
E G + + C+T+G
Sbjct: 241 VELGSEVTVDCNTTG 255
Score = 36 (17.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 12 DSGRYDLIISN 22
DSG Y+ +I N
Sbjct: 95 DSGNYECVIRN 105
>UNIPROTKB|E1BV59 [details] [associations]
symbol:Gga.29966 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004909 "interleukin-1, Type I, activating
receptor activity" evidence=IEA] InterPro:IPR000157
InterPro:IPR004074 InterPro:IPR004076 InterPro:IPR007110
Pfam:PF01582 PRINTS:PR01536 PRINTS:PR01538 PROSITE:PS50104
PROSITE:PS50835 SMART:SM00255 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409 GO:GO:0045087
GO:GO:0005622 GO:GO:0070498 InterPro:IPR015621 PANTHER:PTHR11890
SUPFAM:SSF52200 GeneTree:ENSGT00680000099639 GO:GO:0004909
EMBL:AADN02017766 IPI:IPI00579660 ProteinModelPortal:E1BV59
Ensembl:ENSGALT00000027101 ArrayExpress:E1BV59 Uniprot:E1BV59
Length = 579
Score = 87 (35.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 17 DLIISNASFERDNGKFECRLKAAGSGQ--DLHSQV-YTVTVLTPPQ-PPKIS-PGANPVA 71
DL+I N + + D G + C+ +G+ D+ + V V++PP+ PP+IS P N +
Sbjct: 182 DLVIFNVTVQ-DQGNYTCKTTYTYNGKQYDIARDISLIVEVVSPPKMPPEISYPQNNSIE 240
Query: 72 TE-GRAIELVCSTSG 85
E G + + C+T+G
Sbjct: 241 VELGSEVTVDCNTTG 255
Score = 36 (17.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 12 DSGRYDLIISN 22
DSG Y+ +I N
Sbjct: 95 DSGNYECVIRN 105
>UNIPROTKB|E1C4V8 [details] [associations]
symbol:JAM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007162 "negative regulation of cell adhesion"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR007110 PROSITE:PS50835 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007162 InterPro:IPR013106
Pfam:PF07686 GeneTree:ENSGT00670000097525 OMA:SCEVPNS
EMBL:AADN02010688 IPI:IPI00578899 ProteinModelPortal:E1C4V8
Ensembl:ENSGALT00000025393 ArrayExpress:E1C4V8 Uniprot:E1C4V8
Length = 294
Score = 97 (39.2 bits), Expect = 0.00019, P = 0.00019
Identities = 26/70 (37%), Positives = 34/70 (48%)
Query: 20 ISNASFERDNGKFECRLKAAGS-GQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIE 78
I N + +D+G + C + A GQ L T+TVL PP P I N T G +E
Sbjct: 94 IRNVT-RKDSGTYRCEISAKSEEGQRLGEATITLTVLVPPTTP-ICVVPNSAMT-GTVVE 150
Query: 79 LVCSTSGGSP 88
L C + GSP
Sbjct: 151 LSCKEAEGSP 160
>MGI|MGI:1321398 [details] [associations]
symbol:F11r "F11 receptor" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005923 "tight junction" evidence=IMP]
[GO:0007155 "cell adhesion" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030855 "epithelial cell
differentiation" evidence=IDA] InterPro:IPR007110 PROSITE:PS50835
MGI:MGI:1321398 GO:GO:0016021 GO:GO:0005886 GO:GO:0019048
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 GO:GO:0007155 GO:GO:0005923 InterPro:IPR013098
Pfam:PF07679 GO:GO:0030855 InterPro:IPR003596 SMART:SM00406
GeneTree:ENSGT00670000097525 CTD:50848 eggNOG:NOG150281
HOGENOM:HOG000247041 HOVERGEN:HBG000518 KO:K06089 OMA:SSPRVEW
OrthoDB:EOG4VT5XV ChiTaRS:F11R EMBL:U89915 EMBL:AK033574
EMBL:CT010347 EMBL:AC087229 EMBL:BC021876 IPI:IPI00121362
IPI:IPI00316159 RefSeq:NP_766235.1 UniGene:Mm.294882 PDB:1F97
PDBsum:1F97 ProteinModelPortal:O88792 MINT:MINT-247376
STRING:O88792 PhosphoSite:O88792 PaxDb:O88792 PRIDE:O88792
Ensembl:ENSMUST00000043839 GeneID:16456 KEGG:mmu:16456
InParanoid:O88792 EvolutionaryTrace:O88792 NextBio:289731
CleanEx:MM_F11R Genevestigator:O88792 GermOnline:ENSMUSG00000038235
Uniprot:O88792
Length = 300
Score = 97 (39.2 bits), Expect = 0.00020, P = 0.00020
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 27 RDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGG 86
+DNG++ C + G GQ+ +TVL PP P IS ++ V RA+ L CS G
Sbjct: 101 KDNGEYTCMVSEEG-GQNYGEVSIHLTVLVPPSKPTISVPSS-VTIGNRAV-LTCSEHDG 157
Query: 87 SPDPQIS 93
SP + S
Sbjct: 158 SPPSEYS 164
>UNIPROTKB|E2RN46 [details] [associations]
symbol:PVRL4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR007110 PROSITE:PS50835 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013106 Pfam:PF07686
InterPro:IPR013162 Pfam:PF08205 GeneTree:ENSGT00610000085965
OMA:QDEGIKQ EMBL:AAEX03018451 Ensembl:ENSCAFT00000020174
Uniprot:E2RN46
Length = 435
Score = 99 (39.9 bits), Expect = 0.00021, P = 0.00021
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 18 LIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAI 77
+++ NA + D G++ECR+ +G +++ + VL PP P ++PG P EG+ +
Sbjct: 111 VLLRNA-VQADEGEYECRVSTFPAGS-FQARL-RLRVLVPPLP-SLNPG--PALEEGQGL 164
Query: 78 ELVCS-TSGGSPDPQISVTLQV 98
L S T+ GSP P ++ +V
Sbjct: 165 TLAASCTAEGSPAPSVTWDTEV 186
>MGI|MGI:1891703 [details] [associations]
symbol:Gpa33 "glycoprotein A33 (transmembrane)"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR007110
PROSITE:PS50835 MGI:MGI:1891703 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR013106 Pfam:PF07686 MEROPS:I43.001
InterPro:IPR003596 SMART:SM00406 InterPro:IPR013151 Pfam:PF00047
CTD:10223 eggNOG:NOG44728 HOGENOM:HOG000112779 HOVERGEN:HBG051792
KO:K06790 EMBL:AF247659 EMBL:BC008528 IPI:IPI00311355
RefSeq:NP_067623.1 UniGene:Mm.46357 ProteinModelPortal:Q9JKA5
SMR:Q9JKA5 STRING:Q9JKA5 PhosphoSite:Q9JKA5 PRIDE:Q9JKA5
Ensembl:ENSMUST00000060833 Ensembl:ENSMUST00000166860 GeneID:59290
KEGG:mmu:59290 UCSC:uc007dkj.1 GeneTree:ENSGT00670000097525
InParanoid:Q9JKA5 NextBio:314796 Bgee:Q9JKA5 CleanEx:MM_GPA33
Genevestigator:Q9JKA5 GermOnline:ENSMUSG00000000544 Uniprot:Q9JKA5
Length = 319
Score = 97 (39.2 bits), Expect = 0.00022, P = 0.00022
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 28 DNGKFECRLKAAGSGQDLHSQVYT-VTVLTPPQPPKISPGANPVATEGRAIELVCSTSGG 86
DNG +EC + S QD++++ + VL PP P S V G I+L C ++ G
Sbjct: 111 DNGTYECSVSLM-SDQDVNAKSRVRLLVLVPPSKPDCSIQGEMVI--GNNIQLTCHSAEG 167
Query: 87 SPDPQIS 93
SP PQ S
Sbjct: 168 SPSPQYS 174
>UNIPROTKB|A4IFI9 [details] [associations]
symbol:JAM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0007162 "negative regulation of cell adhesion"
evidence=IEA] InterPro:IPR007110 PROSITE:PS50835 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007162 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR013106 Pfam:PF07686
GeneTree:ENSGT00670000097525 HOGENOM:HOG000247041
HOVERGEN:HBG000518 CTD:58494 eggNOG:NOG132289 KO:K06735
OrthoDB:EOG4TQMB0 OMA:SCEVPNS EMBL:DAAA02000242 EMBL:BC134600
IPI:IPI00687237 RefSeq:NP_001077205.1 UniGene:Bt.18203
STRING:A4IFI9 Ensembl:ENSBTAT00000000795 GeneID:538846
KEGG:bta:538846 InParanoid:A4IFI9 NextBio:20877622 Uniprot:A4IFI9
Length = 298
Score = 96 (38.9 bits), Expect = 0.00025, P = 0.00025
Identities = 28/92 (30%), Positives = 41/92 (44%)
Query: 2 DKVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGS-GQDLHSQVYTVTVLTPPQP 60
D+ E+ID+ + I N + D GK+ C + A GQ+L T+ VL P
Sbjct: 85 DRAEMIDF-------SIRIKNVT-RNDAGKYRCEVSAPSEQGQNLEEDTVTLEVLVAPAV 136
Query: 61 PKIS-PGANPVATEGRAIELVCSTSGGSPDPQ 91
P P + A G +EL C G+P P+
Sbjct: 137 PSCEVPNS---ALRGTVVELRCQDKEGNPAPE 165
>UNIPROTKB|F1S190 [details] [associations]
symbol:LOC100737066 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR007110 PROSITE:PS50835 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013106 Pfam:PF07686
InterPro:IPR013162 Pfam:PF08205 InterPro:IPR013151 Pfam:PF00047
GeneTree:ENSGT00610000085965 EMBL:CU463216
Ensembl:ENSSSCT00000006978 Uniprot:F1S190
Length = 502
Score = 99 (39.9 bits), Expect = 0.00026, P = 0.00026
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 18 LIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAI 77
+++ NA + D G++ECR+ +G +++ + VL PP P ++PG P EG+ +
Sbjct: 103 VLLRNA-VQADEGEYECRVSTFPAGS-FQARL-RLRVLVPPLP-SLNPG--PALEEGQGL 156
Query: 78 ELVCS-TSGGSPDPQISVTLQV 98
L S T+ GSP P ++ +V
Sbjct: 157 TLAASCTAEGSPAPSVTWDTEV 178
>UNIPROTKB|K7GKP7 [details] [associations]
symbol:LOC100737066 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR007110 PROSITE:PS50835 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013106 Pfam:PF07686
InterPro:IPR013162 Pfam:PF08205 InterPro:IPR013151 Pfam:PF00047
GeneTree:ENSGT00610000085965 EMBL:CU463216 RefSeq:XP_001927502.1
Ensembl:ENSSSCT00000034252 GeneID:100154054 Uniprot:K7GKP7
Length = 509
Score = 99 (39.9 bits), Expect = 0.00027, P = 0.00027
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 18 LIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAI 77
+++ NA + D G++ECR+ +G +++ + VL PP P ++PG P EG+ +
Sbjct: 111 VLLRNA-VQADEGEYECRVSTFPAGS-FQARL-RLRVLVPPLP-SLNPG--PALEEGQGL 164
Query: 78 ELVCS-TSGGSPDPQISVTLQV 98
L S T+ GSP P ++ +V
Sbjct: 165 TLAASCTAEGSPAPSVTWDTEV 186
>UNIPROTKB|Q96NY8 [details] [associations]
symbol:PVRL4 "Poliovirus receptor-related protein 4"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005912 "adherens
junction" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0034329 "cell
junction assembly" evidence=TAS] [GO:0034332 "adherens junction
organization" evidence=TAS] [GO:0045216 "cell-cell junction
organization" evidence=TAS] InterPro:IPR007110 PROSITE:PS50835
EMBL:AF426163 GO:GO:0016021 GO:GO:0005886 GO:GO:0019048
GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 GO:GO:0005912 Reactome:REACT_111155 GO:GO:0034332
GO:GO:0034329 InterPro:IPR013106 Pfam:PF07686 EMBL:CH471121
InterPro:IPR013162 Pfam:PF08205 InterPro:IPR013151 Pfam:PF00047
EMBL:AL591806 PDB:4GJT PDBsum:4GJT CleanEx:HS_PRR4 CTD:81607
eggNOG:NOG149403 HOGENOM:HOG000115806 HOVERGEN:HBG108310 KO:K06593
OrthoDB:EOG4QFWD2 EMBL:AK027753 EMBL:BC010423 IPI:IPI00043992
RefSeq:NP_112178.2 UniGene:Hs.492490 UniGene:Hs.732297 PDB:4FRW
PDBsum:4FRW ProteinModelPortal:Q96NY8 SMR:Q96NY8 DIP:DIP-41492N
IntAct:Q96NY8 MINT:MINT-237395 STRING:Q96NY8 PhosphoSite:Q96NY8
DMDM:74761016 PRIDE:Q96NY8 DNASU:81607 Ensembl:ENST00000368012
GeneID:81607 KEGG:hsa:81607 UCSC:uc001fxo.2 GeneCards:GC01M161040
H-InvDB:HIX0001228 HGNC:HGNC:19688 HPA:HPA010775 MIM:609607
MIM:613573 neXtProt:NX_Q96NY8 Orphanet:247820 PharmGKB:PA134991624
InParanoid:Q96NY8 OMA:QDEGIKQ PhylomeDB:Q96NY8 GenomeRNAi:81607
NextBio:71924 ArrayExpress:Q96NY8 Bgee:Q96NY8 CleanEx:HS_PVRL4
Genevestigator:Q96NY8 Uniprot:Q96NY8
Length = 510
Score = 99 (39.9 bits), Expect = 0.00027, P = 0.00027
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 18 LIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAI 77
+++ NA + D G++ECR+ +G +++ + VL PP P ++PG P EG+ +
Sbjct: 112 VLLRNA-VQADEGEYECRVSTFPAGS-FQARL-RLRVLVPPLP-SLNPG--PALEEGQGL 165
Query: 78 ELVCS-TSGGSPDPQISVTLQV 98
L S T+ GSP P ++ +V
Sbjct: 166 TLAASCTAEGSPAPSVTWDTEV 187
>UNIPROTKB|I3L5V3 [details] [associations]
symbol:LOC100737066 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR007110 PROSITE:PS50835 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013106 Pfam:PF07686
InterPro:IPR013162 Pfam:PF08205 InterPro:IPR013151 Pfam:PF00047
GeneTree:ENSGT00610000085965 OMA:QDEGIKQ EMBL:CU463216
Ensembl:ENSSSCT00000029005 Uniprot:I3L5V3
Length = 513
Score = 99 (39.9 bits), Expect = 0.00027, P = 0.00027
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 18 LIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAI 77
+++ NA + D G++ECR+ +G +++ + VL PP P ++PG P EG+ +
Sbjct: 114 VLLRNA-VQADEGEYECRVSTFPAGS-FQARL-RLRVLVPPLP-SLNPG--PALEEGQGL 167
Query: 78 ELVCS-TSGGSPDPQISVTLQV 98
L S T+ GSP P ++ +V
Sbjct: 168 TLAASCTAEGSPAPSVTWDTEV 189
>UNIPROTKB|I3LLB5 [details] [associations]
symbol:I3LLB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR007110 PROSITE:PS50835 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013106 Pfam:PF07686
InterPro:IPR013162 Pfam:PF08205 InterPro:IPR013151 Pfam:PF00047
GeneTree:ENSGT00610000085965 EMBL:CU137698
Ensembl:ENSSSCT00000028387 OMA:TRLPCHY Uniprot:I3LLB5
Length = 514
Score = 99 (39.9 bits), Expect = 0.00027, P = 0.00027
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 18 LIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAI 77
+++ NA + D G++ECR+ +G +++ + VL PP P ++PG P EG+ +
Sbjct: 115 VLLRNA-VQADEGEYECRVSTFPAGS-FQARL-RLRVLVPPLP-SLNPG--PALEEGQGL 168
Query: 78 ELVCS-TSGGSPDPQISVTLQV 98
L S T+ GSP P ++ +V
Sbjct: 169 TLAASCTAEGSPAPSVTWDTEV 190
>UNIPROTKB|E2R8A4 [details] [associations]
symbol:JAM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0007162 "negative regulation of cell adhesion"
evidence=IEA] InterPro:IPR007110 PROSITE:PS50835 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007162 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR013106 Pfam:PF07686
GeneTree:ENSGT00670000097525 EMBL:AAEX03016469
Ensembl:ENSCAFT00000013462 Uniprot:E2R8A4
Length = 297
Score = 95 (38.5 bits), Expect = 0.00032, P = 0.00032
Identities = 28/92 (30%), Positives = 41/92 (44%)
Query: 2 DKVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGS-GQDLHSQVYTVTVLTPPQP 60
D+ E+ID+ + I N + D GK+ C + A GQ+L T+ VL P
Sbjct: 85 DRAEMIDF-------SIRIKNVT-RNDAGKYRCEVSAPSEQGQNLEEDTVTLEVLVAPAV 136
Query: 61 PKIS-PGANPVATEGRAIELVCSTSGGSPDPQ 91
P P + A G +EL C G+P P+
Sbjct: 137 PACEVPNS---ALSGTVVELRCQDKEGNPAPE 165
>RGD|1559826 [details] [associations]
symbol:Pvrl4 "poliovirus receptor-related 4" species:10116
"Rattus norvegicus" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR007110 PROSITE:PS50835 RGD:1559826
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013106 Pfam:PF07686 InterPro:IPR013162 Pfam:PF08205
InterPro:IPR013151 Pfam:PF00047 EMBL:CH473985 IPI:IPI00205685
UniGene:Rn.20370 Ensembl:ENSRNOT00000005506 UCSC:RGD:1559826
Uniprot:D3ZFC9
Length = 483
Score = 98 (39.6 bits), Expect = 0.00032, P = 0.00032
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 18 LIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAI 77
+++ NA + D G++ECR+ +G +++ + VL PP P ++PG P EG+ +
Sbjct: 111 ILLRNA-VQADEGEYECRVSTFPAGS-FQARM-RLRVLVPPLP-SLNPG--PPLEEGQGL 164
Query: 78 ELVCS-TSGGSPDPQISVTLQV 98
L S T+ GSP P ++ +V
Sbjct: 165 TLAASCTAEGSPAPSVTWDTEV 186
>ZFIN|ZDB-GENE-040822-27 [details] [associations]
symbol:negr1 "neuronal growth regulator 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IDA] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-040822-27 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0042802 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00650000092858 InterPro:IPR013106 Pfam:PF07686
HOGENOM:HOG000019085 HOVERGEN:HBG017341 CTD:257194 eggNOG:NOG320658
KO:K06775 OMA:ITGSACD OrthoDB:EOG4C2H9S EMBL:BX908753 EMBL:BX950870
EMBL:CR548641 EMBL:BC080221 EMBL:AF241637 IPI:IPI00628206
RefSeq:NP_001003851.1 UniGene:Dr.86564 IntAct:A0A4W4
Ensembl:ENSDART00000028895 GeneID:445374 KEGG:dre:445374
InParanoid:A0A4W4 NextBio:20832081 Uniprot:A0A4W4
Length = 346
Score = 96 (38.9 bits), Expect = 0.00032, P = 0.00032
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 3 KVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPK 62
+V I+ D Y L I D G + C ++ S ++LH ++ + V PP+
Sbjct: 89 RVSIVSNVGDKHEYSLQIQKVDVT-DEGVYTCSIQ---SERNLHPKLIQLIVKVPPKIYD 144
Query: 63 ISPGANPVATEGRAIELVCSTSGGSPDPQIS 93
IS ++ EG + L+C+ SG P+P+IS
Sbjct: 145 IS--SDITVNEGSNVSLICAASG-KPEPKIS 172
>RGD|1306711 [details] [associations]
symbol:Gpa33 "glycoprotein A33 (transmembrane)" species:10116
"Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR007110
PROSITE:PS50835 RGD:1306711 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR013106 Pfam:PF07686 InterPro:IPR003596
SMART:SM00406 OrthoDB:EOG434W6T GeneTree:ENSGT00670000097525
IPI:IPI00991216 ProteinModelPortal:D3ZRJ6
Ensembl:ENSRNOT00000004986 UCSC:RGD:1306711 Uniprot:D3ZRJ6
Length = 309
Score = 95 (38.5 bits), Expect = 0.00034, P = 0.00034
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 28 DNGKFECRLKAAGSGQDLHSQVYT-VTVLTPPQPPKISPGANPVATEGRAIELVCSTSGG 86
DNG +EC + S QD+ S+ + VL PP P G G I+L C ++ G
Sbjct: 101 DNGTYECSVSLM-SDQDVTSRSRVRLLVLVPPSKPDC--GIEGETVIGNNIQLTCHSAEG 157
Query: 87 SPDPQIS 93
SP PQ S
Sbjct: 158 SPSPQYS 164
>UNIPROTKB|E1BPL4 [details] [associations]
symbol:KIRREL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0036057 "slit diaphragm" evidence=IEA] [GO:0016337
"cell-cell adhesion" evidence=IEA] [GO:0001933 "negative regulation
of protein phosphorylation" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR007110 PROSITE:PS50835 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016337 InterPro:IPR013098
Pfam:PF07679 GO:GO:0001933 InterPro:IPR013162 Pfam:PF08205
GeneTree:ENSGT00550000074545 GO:GO:0036057 OMA:WSRYWIS
EMBL:DAAA02046952 IPI:IPI00685877 Ensembl:ENSBTAT00000010297
Uniprot:E1BPL4
Length = 707
Score = 99 (39.9 bits), Expect = 0.00041, P = 0.00041
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 13 SGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVAT 72
SG++DL I E D +EC+ AG L S+ + VL PP PP++ G +
Sbjct: 83 SGQHDLHIRPVELE-DQASYECQATQAG----LRSRPAQLHVLVPPDPPQVLGGPSVSLV 137
Query: 73 EGRAIELVCSTSGGS-PDPQI 92
G L C + G + P P++
Sbjct: 138 AGVPANLTCRSRGDAHPTPEL 158
>UNIPROTKB|P57087 [details] [associations]
symbol:JAM2 "Junctional adhesion molecule B" species:9606
"Homo sapiens" [GO:0007162 "negative regulation of cell adhesion"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005923 "tight junction" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=NAS] [GO:0016337
"cell-cell adhesion" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007596 "blood coagulation" evidence=TAS]
[GO:0050900 "leukocyte migration" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] Reactome:REACT_604
InterPro:IPR007110 PROSITE:PS50835 Reactome:REACT_111102
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0007596
GO:GO:0050900 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0005923 GO:GO:0016337 GO:GO:0007162
Pathway_Interaction_DB:amb2_neutrophils_pathway InterPro:IPR013098
Pfam:PF07679 InterPro:IPR013106 Pfam:PF07686 HOGENOM:HOG000247041
HOVERGEN:HBG000518 EMBL:AF255910 EMBL:AY016009 EMBL:AY077698
EMBL:AY358361 EMBL:AK294769 EMBL:AK312708 EMBL:AP000223
EMBL:AP000224 EMBL:AP000225 EMBL:AP000226 EMBL:BC017779
IPI:IPI00299083 RefSeq:NP_001257336.1 RefSeq:NP_001257337.1
RefSeq:NP_067042.1 UniGene:Hs.517227 ProteinModelPortal:P57087
SMR:P57087 IntAct:P57087 MINT:MINT-1344995 STRING:P57087
PhosphoSite:P57087 DMDM:10720348 PRIDE:P57087 DNASU:58494
Ensembl:ENST00000400532 Ensembl:ENST00000425221
Ensembl:ENST00000480456 GeneID:58494 KEGG:hsa:58494 UCSC:uc002ylp.1
CTD:58494 GeneCards:GC21P027011 HGNC:HGNC:14686 MIM:606870
neXtProt:NX_P57087 PharmGKB:PA29992 eggNOG:NOG132289 KO:K06735
OrthoDB:EOG4TQMB0 GenomeRNAi:58494 NextBio:64980
ArrayExpress:P57087 Bgee:P57087 CleanEx:HS_JAM2
Genevestigator:P57087 GermOnline:ENSG00000154721 Uniprot:P57087
Length = 298
Score = 94 (38.1 bits), Expect = 0.00041, P = 0.00041
Identities = 23/77 (29%), Positives = 36/77 (46%)
Query: 16 YDLIISNASFERDNGKFECRLKAAGS-GQDLHSQVYTVTVLTPPQPPKISPGANPVATEG 74
+++ I N + D GK+ C + A GQ+L T+ VL P P ++ A G
Sbjct: 92 FNIRIKNVT-RSDAGKYRCEVSAPSEQGQNLEEDTVTLEVLVAPAVPSCEVPSS--ALSG 148
Query: 75 RAIELVCSTSGGSPDPQ 91
+EL C G+P P+
Sbjct: 149 TVVELRCQDKEGNPAPE 165
>RGD|621842 [details] [associations]
symbol:F11r "F11 receptor" species:10116 "Rattus norvegicus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0005923 "tight junction"
evidence=IEA;ISO] [GO:0007155 "cell adhesion" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0030855 "epithelial cell
differentiation" evidence=IEA;ISO] InterPro:IPR007110
PROSITE:PS50835 RGD:621842 GO:GO:0016021 GO:GO:0005886
GO:GO:0019048 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 GO:GO:0005923 InterPro:IPR013106
Pfam:PF07686 InterPro:IPR003596 SMART:SM00406
GeneTree:ENSGT00670000097525 CTD:50848 eggNOG:NOG150281
HOGENOM:HOG000247041 HOVERGEN:HBG000518 KO:K06089 OMA:SSPRVEW
OrthoDB:EOG4VT5XV EMBL:AF276998 EMBL:BC065309 IPI:IPI00200067
RefSeq:NP_446248.1 UniGene:Rn.107273 ProteinModelPortal:Q9JHY1
SMR:Q9JHY1 MINT:MINT-135629 STRING:Q9JHY1 PhosphoSite:Q9JHY1
PRIDE:Q9JHY1 Ensembl:ENSRNOT00000006141 GeneID:116479
KEGG:rno:116479 UCSC:RGD:621842 InParanoid:Q9JHY1 NextBio:619047
ArrayExpress:Q9JHY1 Genevestigator:Q9JHY1
GermOnline:ENSRNOG00000004414 Uniprot:Q9JHY1
Length = 300
Score = 94 (38.1 bits), Expect = 0.00042, P = 0.00042
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 27 RDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVCSTSGG 86
+DNG++ C + G GQ+ +TVL PP P +S ++ V RA+ L CS G
Sbjct: 101 KDNGEYTCMVSEDG-GQNYGEVSIHLTVLVPPSKPTVSIPSS-VTIGNRAV-LTCSEHDG 157
Query: 87 SPDPQIS 93
SP + S
Sbjct: 158 SPPSEYS 164
>MGI|MGI:1918990 [details] [associations]
symbol:Pvrl4 "poliovirus receptor-related 4" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005912 "adherens
junction" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016337 "cell-cell adhesion"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
InterPro:IPR007110 PROSITE:PS50835 MGI:MGI:1918990 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0005912 GO:GO:0016337 InterPro:IPR013106 Pfam:PF07686
InterPro:IPR013162 Pfam:PF08205 InterPro:IPR013151 Pfam:PF00047
GeneTree:ENSGT00610000085965 CTD:81607 eggNOG:NOG149403
HOGENOM:HOG000115806 HOVERGEN:HBG108310 KO:K06593 OrthoDB:EOG4QFWD2
EMBL:AF472510 EMBL:AK004821 EMBL:AK154983 EMBL:AK028479
EMBL:BC024948 IPI:IPI00119991 IPI:IPI00453941 RefSeq:NP_001116152.1
RefSeq:NP_082169.2 UniGene:Mm.263414 ProteinModelPortal:Q8R007
SMR:Q8R007 DIP:DIP-59965N STRING:Q8R007 PhosphoSite:Q8R007
PRIDE:Q8R007 Ensembl:ENSMUST00000006578 Ensembl:ENSMUST00000094325
GeneID:71740 KEGG:mmu:71740 UCSC:uc007doe.2 UCSC:uc011wwc.1
InParanoid:Q8R007 NextBio:334373 Bgee:Q8R007 CleanEx:MM_PVRL4
Genevestigator:Q8R007 Uniprot:Q8R007
Length = 508
Score = 97 (39.2 bits), Expect = 0.00044, P = 0.00044
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 18 LIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAI 77
+++ NA + D G++ECR+ +G +++ + VL PP P ++PG P EG+ +
Sbjct: 111 VLLRNA-VQADEGEYECRVSTFPAGS-FQARM-RLRVLVPPLP-SLNPG--PPLEEGQGL 164
Query: 78 ELVCS-TSGGSPDPQISVTLQV 98
L S T+ GSP P ++ +V
Sbjct: 165 TLAASCTAEGSPAPSVTWDTEV 186
>UNIPROTKB|A6QLR1 [details] [associations]
symbol:PVRL4 "Poliovirus receptor-related protein 4"
species:9913 "Bos taurus" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR007110 PROSITE:PS50835 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR013106
Pfam:PF07686 InterPro:IPR013162 Pfam:PF08205
GeneTree:ENSGT00610000085965 IPI:IPI00718186 UniGene:Bt.37169
HOVERGEN:HBG108310 OMA:QDEGIKQ EMBL:DAAA02006959 EMBL:DAAA02006960
EMBL:DAAA02006961 EMBL:BC148055 STRING:A6QLR1
Ensembl:ENSBTAT00000023767 InParanoid:A6QLR1 Uniprot:A6QLR1
Length = 510
Score = 97 (39.2 bits), Expect = 0.00044, P = 0.00044
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 18 LIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAI 77
+++ NA + D G++ECR+ +G +++ + VL PP P ++PG P EG+ +
Sbjct: 112 VLLRNA-VQADEGEYECRVSTFPAGS-FQARL-RLRVLVPPLP-SLNPG--PPLEEGQGL 165
Query: 78 ELVCS-TSGGSPDPQISVTLQV 98
L S T+ GSP P ++ +V
Sbjct: 166 TLAASCTAEGSPAPSVTWDTEV 187
>RGD|1311610 [details] [associations]
symbol:Cd22 "CD22 molecule" species:10116 "Rattus norvegicus"
[GO:0005887 "integral to plasma membrane" evidence=IEA;ISO]
[GO:0009897 "external side of plasma membrane" evidence=IEA;ISO]
InterPro:IPR007110 PROSITE:PS50835 RGD:1311610 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0009897
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013162 Pfam:PF08205 EMBL:CH473979 CTD:933 KO:K06467
OMA:SGAYWCQ OrthoDB:EOG4C87RQ GeneTree:ENSGT00690000102114
IPI:IPI00391738 RefSeq:NP_001100973.1 UniGene:Rn.25921
Ensembl:ENSRNOT00000033155 GeneID:308501 KEGG:rno:308501
UCSC:RGD:1311610 NextBio:659026 Uniprot:D3ZD88
Length = 852
Score = 99 (39.9 bits), Expect = 0.00051, P = 0.00051
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 24 SFERD-NGKFECRLKA-AGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAIELVC 81
S +D GK++CR G GQ S+ +TVL PP+P K+ +P A EG+++EL+C
Sbjct: 303 SVTKDMRGKYQCRASNNIGQGQ---SKEVALTVLYPPEPSKVHIYPSP-AEEGQSVELIC 358
Query: 82 STSGGSP 88
S SP
Sbjct: 359 D-SLASP 364
>UNIPROTKB|Q92854 [details] [associations]
symbol:SEMA4D "Semaphorin-4D" species:9606 "Homo sapiens"
[GO:0071526 "semaphorin-plexin signaling pathway" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0004888
"transmembrane signaling receptor activity" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031344 "regulation
of cell projection organization" evidence=IMP] [GO:0008360
"regulation of cell shape" evidence=IMP] [GO:0005887 "integral to
plasma membrane" evidence=IDA] [GO:0070486 "leukocyte aggregation"
evidence=IMP] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0030335 "positive regulation of
cell migration" evidence=ISS;IDA] [GO:0014068 "positive regulation
of phosphatidylinositol 3-kinase cascade" evidence=IMP] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IMP] [GO:0048672
"positive regulation of collateral sprouting" evidence=IMP]
[GO:0032321 "positive regulation of Rho GTPase activity"
evidence=ISS;IMP] [GO:0007155 "cell adhesion" evidence=TAS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=TAS] [GO:0006955 "immune response" evidence=TAS]
[GO:0004872 "receptor activity" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
[GO:0043931 "ossification involved in bone maturation"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0010693
"negative regulation of alkaline phosphatase activity"
evidence=IMP] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=ISS] [GO:0050731 "positive regulation of
peptidyl-tyrosine phosphorylation" evidence=ISS] [GO:0050732
"negative regulation of peptidyl-tyrosine phosphorylation"
evidence=ISS] [GO:1900220 "semaphorin-plexin signaling pathway
involved in bone trabecula morphogenesis" evidence=ISS] [GO:0030215
"semaphorin receptor binding" evidence=ISS] [GO:0005615
"extracellular space" evidence=ISS] InterPro:IPR001627
InterPro:IPR002165 InterPro:IPR007110 InterPro:IPR015943
InterPro:IPR016201 Pfam:PF01403 Pfam:PF01437 PROSITE:PS50835
PROSITE:PS51004 SMART:SM00630 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0043066 GO:GO:0005615 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0006955 Gene3D:2.130.10.10 GO:GO:0008360
InterPro:IPR003599 SMART:SM00409 GO:GO:0014068 GO:GO:0000122
GO:GO:0050731 GO:GO:0048814 GO:GO:0030335 GO:GO:0032321
GO:GO:0004888 GO:GO:0045668 InterPro:IPR003659 SMART:SM00423
GO:GO:0048672 InterPro:IPR013151 Pfam:PF00047 SUPFAM:SSF103575
GO:GO:0050732 SUPFAM:SSF101912 PDB:3OL2 PDBsum:3OL2 GO:GO:0030215
GO:GO:0043931 GO:GO:1900220 InterPro:IPR027231 PANTHER:PTHR11036
EMBL:AL929575 KO:K06521 eggNOG:NOG326211 EMBL:U60800 EMBL:AL590233
EMBL:BC054500 EMBL:BC137515 EMBL:BC137518 EMBL:AK097056
IPI:IPI00023807 IPI:IPI00915390 RefSeq:NP_001135759.1
RefSeq:NP_006369.3 UniGene:Hs.494406 PDB:1OLZ PDBsum:1OLZ
ProteinModelPortal:Q92854 SMR:Q92854 DIP:DIP-59221N IntAct:Q92854
STRING:Q92854 PhosphoSite:Q92854 DMDM:8134701 PaxDb:Q92854
PeptideAtlas:Q92854 PRIDE:Q92854 Ensembl:ENST00000339861
Ensembl:ENST00000343780 Ensembl:ENST00000356444
Ensembl:ENST00000420101 Ensembl:ENST00000420987
Ensembl:ENST00000422704 Ensembl:ENST00000438547
Ensembl:ENST00000450295 Ensembl:ENST00000455551 GeneID:10507
KEGG:hsa:10507 UCSC:uc004aqo.1 UCSC:uc011ltm.1 CTD:10507
GeneCards:GC09M091975 HGNC:HGNC:10732 HPA:HPA015662 HPA:HPA023277
MIM:601866 neXtProt:NX_Q92854 PharmGKB:PA35654 HOGENOM:HOG000111669
HOVERGEN:HBG061627 InParanoid:Q8N8B0 OMA:FCQATGP PhylomeDB:Q92854
EvolutionaryTrace:Q92854 GenomeRNAi:10507 NextBio:39858
ArrayExpress:Q92854 Bgee:Q92854 CleanEx:HS_SEMA4D
Genevestigator:Q92854 GermOnline:ENSG00000187764 GO:GO:0070486
GO:GO:0010693 Uniprot:Q92854
Length = 862
Score = 88 (36.0 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 33/90 (36%), Positives = 46/90 (51%)
Query: 14 GRYDLIISNASFERDNGKFEC----RLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANP 69
GR +L+I N S E D+G ++C R+K Q + V V V+ P+P ++P +
Sbjct: 605 GRKNLLIFNLS-EGDSGVYQCLSEERVKNKTVFQVVAKHVLEVKVV--PKPV-VAPTLSV 660
Query: 70 VATEGRAIE---LVCSTSGGSPD-PQISVT 95
V TEG I LV ST G SP P + T
Sbjct: 661 VQTEGSRIATKVLVASTQGSSPPTPAVQAT 690
Score = 34 (17.0 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 3 KVEIIDYRPDSG 14
K +I RPDSG
Sbjct: 276 KARLICSRPDSG 287
>UNIPROTKB|Q5E9Z9 [details] [associations]
symbol:PVRL4 "Poliovirus receptor-related protein 4"
species:9913 "Bos taurus" [GO:0005912 "adherens junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] InterPro:IPR007110 PROSITE:PS50835
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 GO:GO:0005912 InterPro:IPR013106 Pfam:PF07686
InterPro:IPR013162 Pfam:PF08205 EMBL:BT020770 IPI:IPI00718186
RefSeq:NP_001019665.1 UniGene:Bt.37169 ProteinModelPortal:Q5E9Z9
STRING:Q5E9Z9 PRIDE:Q5E9Z9 GeneID:507718 KEGG:bta:507718 CTD:81607
eggNOG:NOG149403 HOGENOM:HOG000115806 HOVERGEN:HBG108310
InParanoid:Q5E9Z9 KO:K06593 OrthoDB:EOG4QFWD2 NextBio:20868192
Uniprot:Q5E9Z9
Length = 510
Score = 95 (38.5 bits), Expect = 0.00072, P = 0.00072
Identities = 26/82 (31%), Positives = 45/82 (54%)
Query: 18 LIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPPKISPGANPVATEGRAI 77
+++ NA D G++ECR+ +G +++ + VL PP P ++PG P EG+ +
Sbjct: 112 VLLRNA-VHADEGEYECRVSTFPAGS-FQARL-RLRVLVPPLP-SLNPG--PPLEEGQGL 165
Query: 78 ELVCS-TSGGSPDPQISVTLQV 98
L S T+ GSP P ++ +V
Sbjct: 166 TLAASCTAEGSPAPSVTWDTEV 187
>ZFIN|ZDB-GENE-041114-138 [details] [associations]
symbol:cadm4 "cell adhesion molecule 4"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-041114-138 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR013106 Pfam:PF07686
InterPro:IPR013162 Pfam:PF08205 InterPro:IPR003585 SMART:SM00294
GeneTree:ENSGT00610000085800 EMBL:CR391920 EMBL:CR854851
EMBL:CT867948 EMBL:CT867949 IPI:IPI00919519
ProteinModelPortal:E9QED1 Ensembl:ENSDART00000111564
ArrayExpress:E9QED1 Bgee:E9QED1 Uniprot:E9QED1
Length = 415
Score = 93 (37.8 bits), Expect = 0.00089, P = 0.00089
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 2 DKVEIIDYRPDSGRYDLIISNASFERDNGKFECRLKAAGSGQDLHSQVYTVTVLTPPQPP 61
D+ +++ + P R + ++N S + G F C+L D H QV T++V+ PP+ P
Sbjct: 81 DRFQMVLFTPKLVR--ITLTNVSVSDEGGYF-CQLYT----DDTHHQVATLSVVVPPEVP 133
Query: 62 KISPGANPVATEGRAIELVCSTSGGSP 88
+ A EG +EL C + P
Sbjct: 134 SVE--VKTEAVEGGEVELTCLSLRSKP 158
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.133 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 98 98 0.00091 102 3 11 23 0.45 30
29 0.45 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 513 (55 KB)
Total size of DFA: 102 KB (2072 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.95u 0.09s 14.04t Elapsed: 00:00:04
Total cpu time: 13.95u 0.09s 14.04t Elapsed: 00:00:04
Start: Thu Aug 15 14:49:49 2013 End: Thu Aug 15 14:49:53 2013