BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5867
(287 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V831|APC10_DROME Anaphase-promoting complex subunit 10 OS=Drosophila melanogaster
GN=Apc10 PE=2 SV=2
Length = 195
Score = 248 bits (634), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 152/198 (76%), Gaps = 28/198 (14%)
Query: 8 EKDPVMEERLGRIREVGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQSDGQLPHLVNVQFR 67
E+DP+ EERLG +REVG+QA+WSLSSCKPGFGV++LRD+ MDTYWQSDGQLPHL
Sbjct: 18 EEDPLAEERLGFVREVGAQAVWSLSSCKPGFGVERLRDNIMDTYWQSDGQLPHL------ 71
Query: 68 RKTTVQDICIYRQLPHLVNVQFRRKTTVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQ 127
VN+QF ++T + I IYTDYKLDESYTPSR+S+R+GTNFNDLQ
Sbjct: 72 -----------------VNIQFHKRTNISQIYIYTDYKLDESYTPSRISIRSGTNFNDLQ 114
Query: 128 EIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQ--Q 185
E++V+DL EP+GWV+IPIKD + K IRT+M+QIAV+SNHQNGRDTHMRQI++++PV+
Sbjct: 115 ELQVMDLTEPTGWVQIPIKDGNVKSIRTFMLQIAVISNHQNGRDTHMRQIRIHAPVEGKH 174
Query: 186 HPSTM---FTTVECQQVS 200
+P + F TV+ Q+ +
Sbjct: 175 YPLELFGKFGTVDFQKFA 192
Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 97/134 (72%), Gaps = 10/134 (7%)
Query: 159 QIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQEIEVVDL 218
Q+ + N Q + T++ QI +Y+ + + + ++S+R+GTNFNDLQE++V+DL
Sbjct: 67 QLPHLVNIQFHKRTNISQIYIYTDYK-----LDESYTPSRISIRSGTNFNDLQELQVMDL 121
Query: 219 NEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQ--QHPSTM-- 274
EP+GWV+IPIKD + K IRT+M+QIAV+SNHQNGRDTHMRQI++++PV+ +P +
Sbjct: 122 TEPTGWVQIPIKDGNVKSIRTFMLQIAVISNHQNGRDTHMRQIRIHAPVEGKHYPLELFG 181
Query: 275 -FTTVECQQYAVIR 287
F TV+ Q++A IR
Sbjct: 182 KFGTVDFQKFATIR 195
>sp|Q9UM13|APC10_HUMAN Anaphase-promoting complex subunit 10 OS=Homo sapiens GN=ANAPC10
PE=1 SV=1
Length = 185
Score = 235 bits (599), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 108/176 (61%), Positives = 132/176 (75%), Gaps = 23/176 (13%)
Query: 10 DPVMEERLGRIREVGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQSDGQLPHLVNVQFRRK 69
DP ER G +RE+GSQA+WSLSSCKPGFGVDQLRDD ++TYWQSDG PHLVN
Sbjct: 12 DPKQLERTGTVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVN------ 65
Query: 70 TTVQDICIYRQLPHLVNVQFRRKTTVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQEI 129
+QFRRKTTV+ +CIY DYK DESYTPS++SVR G NF++LQEI
Sbjct: 66 -----------------IQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEI 108
Query: 130 EVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQ 185
++L EPSGW+ +P+ D H KP RT+MIQIAV++NHQNGRDTHMRQIK+Y+PV++
Sbjct: 109 RQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIKIYTPVEE 164
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 70/93 (75%), Gaps = 3/93 (3%)
Query: 198 QVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTH 257
++SVR G NF++LQEI ++L EPSGW+ +P+ D H KP RT+MIQIAV++NHQNGRDTH
Sbjct: 93 KISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTH 152
Query: 258 MRQIKVYSPVQQHPSTMF---TTVECQQYAVIR 287
MRQIK+Y+PV++ F TT++ Y IR
Sbjct: 153 MRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR 185
>sp|Q2YDH1|APC10_BOVIN Anaphase-promoting complex subunit 10 OS=Bos taurus GN=ANAPC10 PE=2
SV=1
Length = 185
Score = 234 bits (598), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 108/176 (61%), Positives = 132/176 (75%), Gaps = 23/176 (13%)
Query: 10 DPVMEERLGRIREVGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQSDGQLPHLVNVQFRRK 69
DP ER G +RE+GSQA+WSLSSCKPGFGVDQLRDD ++TYWQSDG PHLVN+
Sbjct: 12 DPKQLERTGTVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNL----- 66
Query: 70 TTVQDICIYRQLPHLVNVQFRRKTTVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQEI 129
QFRRKTTV+ +CIY DYK DESYTPS++SVR G NF++LQEI
Sbjct: 67 ------------------QFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEI 108
Query: 130 EVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQ 185
++L EPSGW+ +P+ D H KP RT+MIQIAV++NHQNGRDTHMRQIK+Y+PV++
Sbjct: 109 RQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIKIYTPVEE 164
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 70/93 (75%), Gaps = 3/93 (3%)
Query: 198 QVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTH 257
++SVR G NF++LQEI ++L EPSGW+ +P+ D H KP RT+MIQIAV++NHQNGRDTH
Sbjct: 93 KISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTH 152
Query: 258 MRQIKVYSPVQQHPSTMF---TTVECQQYAVIR 287
MRQIK+Y+PV++ F TT++ Y IR
Sbjct: 153 MRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR 185
>sp|Q8K2H6|APC10_MOUSE Anaphase-promoting complex subunit 10 OS=Mus musculus GN=Anapc10
PE=2 SV=1
Length = 185
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 131/176 (74%), Gaps = 23/176 (13%)
Query: 10 DPVMEERLGRIREVGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQSDGQLPHLVNVQFRRK 69
DP ER +RE+GSQA+WSLSSCKPGFGVDQLRDD ++TYWQSDG PHLVN
Sbjct: 12 DPKQLERTATVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVN------ 65
Query: 70 TTVQDICIYRQLPHLVNVQFRRKTTVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQEI 129
+QFRRKTTV+ +CIY DYK DESYTPS++SVR G NF++LQEI
Sbjct: 66 -----------------IQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEI 108
Query: 130 EVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQ 185
++L EPSGW+ +P+ D H KP RT+MIQIAV++NHQNGRDTHMRQIK+Y+PV++
Sbjct: 109 RQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIKIYTPVEE 164
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 70/93 (75%), Gaps = 3/93 (3%)
Query: 198 QVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTH 257
++SVR G NF++LQEI ++L EPSGW+ +P+ D H KP RT+MIQIAV++NHQNGRDTH
Sbjct: 93 KISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTH 152
Query: 258 MRQIKVYSPVQQHPSTMF---TTVECQQYAVIR 287
MRQIK+Y+PV++ F TT++ Y IR
Sbjct: 153 MRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR 185
>sp|Q9ZPW2|APC10_ARATH Anaphase-promoting complex subunit 10 OS=Arabidopsis thaliana
GN=At2g18290 PE=1 SV=2
Length = 192
Score = 171 bits (432), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 118/181 (65%), Gaps = 28/181 (15%)
Query: 20 IREVGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQSDGQLPHLVNVQFRRKTTVQDICIYR 79
+RE+G A WS+SSCKPG GV LRDD ++TYWQSDG PHL+N+Q
Sbjct: 27 LREMGKNAAWSVSSCKPGNGVTTLRDDNLETYWQSDGLQPHLINIQ-------------- 72
Query: 80 QLPHLVNVQFRRKTTVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQEIEVVDLNEPSG 139
F++K +Q + +Y D+KLDESYTPS++S+RAG F++L+EI+ V+L +P+G
Sbjct: 73 ---------FQKKVKLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKSVELVKPTG 123
Query: 140 WVKIPIK--DIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQ---HPSTMFTTV 194
WV + + D + + T+M+QIA++SNH NGRDTH+RQIKVY P H FT++
Sbjct: 124 WVCLSLSGTDPRETFVNTFMLQIAILSNHLNGRDTHIRQIKVYGPRPNPIPHQPFQFTSM 183
Query: 195 E 195
E
Sbjct: 184 E 184
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 65/95 (68%), Gaps = 5/95 (5%)
Query: 198 QVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIK--DIHDKPIRTYMIQIAVMSNHQNGRD 255
++S+RAG F++L+EI+ V+L +P+GWV + + D + + T+M+QIA++SNH NGRD
Sbjct: 98 KISIRAGDGFHNLKEIKSVELVKPTGWVCLSLSGTDPRETFVNTFMLQIAILSNHLNGRD 157
Query: 256 THMRQIKVYSPVQQ---HPSTMFTTVECQQYAVIR 287
TH+RQIKVY P H FT++E Y+ +R
Sbjct: 158 THIRQIKVYGPRPNPIPHQPFQFTSMEFLTYSTLR 192
>sp|Q55ER5|APC10_DICDI Anaphase-promoting complex subunit 10 OS=Dictyostelium discoideum
GN=anapc10 PE=3 SV=1
Length = 188
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 115/173 (66%), Gaps = 26/173 (15%)
Query: 10 DPVMEE-RLGRIREVGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQSDGQLPHLVNVQFRR 68
DP+++E L ++ E+G A WS+SS KPG GV+QLRD+ +DT+WQSD Q PH + +QF +
Sbjct: 15 DPILQEIELNKV-EIGKHASWSVSSAKPGSGVEQLRDNNLDTFWQSDAQQPHHITIQFPK 73
Query: 69 KTTVQDICIYRQLPHLVNVQFRRKTTVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQE 128
K ++++ I+ DYKLDESYTP ++S++AGT +DLQE
Sbjct: 74 -----------------------KCYIENLLIHCDYKLDESYTPCKISIKAGTILHDLQE 110
Query: 129 IEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYS 181
I + +L EPSGW+ IP+ ++ ++ ++QI+++SN +NGRD+H+RQIKVY
Sbjct: 111 IILTELEEPSGWINIPL-SFNNNSLKANLLQISILSNLKNGRDSHIRQIKVYG 162
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Query: 198 QVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTH 257
++S++AGT +DLQEI + +L EPSGW+ IP+ ++ ++ ++QI+++SN +NGRD+H
Sbjct: 96 KISIKAGTILHDLQEIILTELEEPSGWINIPL-SFNNNSLKANLLQISILSNLKNGRDSH 154
Query: 258 MRQIKVYS 265
+RQIKVY
Sbjct: 155 IRQIKVYG 162
>sp|O42971|APC10_SCHPO Anaphase-promoting complex subunit 10 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=apc10 PE=1 SV=1
Length = 189
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 102/168 (60%), Gaps = 24/168 (14%)
Query: 22 EVGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQSDGQLPHLVNVQFRRKTTVQDICIYRQL 81
++G+ A W+ SS K GF + +RDD +DTYWQSDG PH ++++F ++ +
Sbjct: 25 DIGNLAQWTCSSEKSGFPIRLVRDDNIDTYWQSDGSQPHTIHIKFVKRVS---------- 74
Query: 82 PHLVNVQFRRKTTVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQEIEVVDLNEPSGWV 141
++ + +Y Y LDESYTPS + + AGT F DL+ + V + EP+GWV
Sbjct: 75 -------------IKYVSMYLQYTLDESYTPSTLRISAGTGFQDLEIVTTVQVEEPTGWV 121
Query: 142 KIPIKDI-HDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPS 188
+P+ D + + ++IQI +++NHQ+G+D+H+R IK+Y+P + P+
Sbjct: 122 HVPVGDFGRNGLLDVHLIQIKILANHQSGKDSHVRLIKIYAPEIEQPA 169
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 18/145 (12%)
Query: 135 NEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTV 194
+E SG+ PI+ + D I TY +G H IK V +M+
Sbjct: 36 SEKSGF---PIRLVRDDNIDTYW--------QSDGSQPHTIHIKFVKRVSIKYVSMYLQY 84
Query: 195 ECQQ------VSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDI-HDKPIRTYMIQIAVM 247
+ + + AGT F DL+ + V + EP+GWV +P+ D + + ++IQI ++
Sbjct: 85 TLDESYTPSTLRISAGTGFQDLEIVTTVQVEEPTGWVHVPVGDFGRNGLLDVHLIQIKIL 144
Query: 248 SNHQNGRDTHMRQIKVYSPVQQHPS 272
+NHQ+G+D+H+R IK+Y+P + P+
Sbjct: 145 ANHQSGKDSHVRLIKIYAPEIEQPA 169
>sp|P53068|APC10_YEAST Anaphase-promoting complex subunit DOC1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DOC1 PE=1 SV=2
Length = 250
Score = 91.3 bits (225), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 25/170 (14%)
Query: 18 GRIREVGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQSDGQLPHLVNVQFRRKTTVQDICI 77
R+ V A+W SS K G VD DD DT+WQSDG PH +++ F ++ DIC+
Sbjct: 79 ARMINVTHLALWKPSSFKLGNPVDFALDDNYDTFWQSDGGQPHQLDIMFSKRM---DICV 135
Query: 78 YRQLPHLVNVQFRRKTTVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQEIEVVDLNEP 137
+ I+ DESY PS V V AG + +D + +++++
Sbjct: 136 --------------------MAIFFSMIADESYAPSLVKVYAGHSPSDARFYKMLEVRNV 175
Query: 138 SGWVKIPIKDIH--DKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQ 185
+GWV + D D+ ++ I++ NH+NG+DTH+R I++Y P +
Sbjct: 176 NGWVALRFLDNREDDQLLKCQFIRLLFPVNHENGKDTHLRGIRLYVPSNE 225
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 199 VSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIH--DKPIRTYMIQIAVMSNHQNGRDT 256
V V AG + +D + +++++ +GWV + D D+ ++ I++ NH+NG+DT
Sbjct: 153 VKVYAGHSPSDARFYKMLEVRNVNGWVALRFLDNREDDQLLKCQFIRLLFPVNHENGKDT 212
Query: 257 HMRQIKVYSPVQQ 269
H+R I++Y P +
Sbjct: 213 HLRGIRLYVPSNE 225
>sp|Q3U487|HECD3_MOUSE E3 ubiquitin-protein ligase HECTD3 OS=Mus musculus GN=Hectd3 PE=1
SV=2
Length = 861
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 35/176 (19%)
Query: 14 EERLGRIREVGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQSDGQLPHLVNVQFRRKTTVQ 73
+E LG +++ ++I +SS F V L D DTYW+SDG
Sbjct: 234 DENLGSVKQY-VESI-DVSSYTEEFNVSCLTDSNADTYWESDGS---------------- 275
Query: 74 DICIYRQLPHLVNVQFRRKTTVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQEIEVVD 133
Q H V + ++ T V+ + + D D+++ P RV V G ++L+++ V+
Sbjct: 276 ------QCQHWVRLTMKKGTIVKKLLLTVD-TTDDNFMPKRVVVYGGEG-DNLKKLSDVN 327
Query: 134 LNEPSGWVKIPIKDI---HDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQH 186
++E I D+ D + +I+I ++ +G D +R +K+ S Q+
Sbjct: 328 IDE------TLIGDVCVLEDMTVHLPIIEIRIVECRDDGIDVRLRGVKIKSSRQRE 377
>sp|Q5T447|HECD3_HUMAN E3 ubiquitin-protein ligase HECTD3 OS=Homo sapiens GN=HECTD3 PE=1
SV=1
Length = 861
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 35/176 (19%)
Query: 14 EERLGRIREVGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQSDGQLPHLVNVQFRRKTTVQ 73
+E LG +++ ++I +SS F V L D DTYW+SDG
Sbjct: 234 DENLGSVKQY-VESI-DVSSYTEEFNVSCLTDSNADTYWESDGS---------------- 275
Query: 74 DICIYRQLPHLVNVQFRRKTTVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQEIEVVD 133
Q H V + ++ T V+ + + D D+++ P RV V G ++L+++ V
Sbjct: 276 ------QCQHWVRLTMKKGTIVKKLLLTVD-TTDDNFMPKRVVVYGGEG-DNLKKLSDVS 327
Query: 134 LNEPSGWVKIPIKDI---HDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQH 186
++E I D+ D + +I+I ++ +G D +R +K+ S Q+
Sbjct: 328 IDE------TLIGDVCVLEDMTVHLPIIEIRIVECRDDGIDVRLRGVKIKSSRQRE 377
>sp|O43149|ZZEF1_HUMAN Zinc finger ZZ-type and EF-hand domain-containing protein 1 OS=Homo
sapiens GN=ZZEF1 PE=1 SV=6
Length = 2961
Score = 38.1 bits (87), Expect = 0.078, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 61/142 (42%), Gaps = 32/142 (22%)
Query: 40 VDQLRDDCMDTYWQSDGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDIC 99
+D++ + +YWQSDG H + ++ + ++ +
Sbjct: 265 IDKMTNGETSSYWQSDGS----------------------ACSHWIRLKMKPDVVLRHLS 302
Query: 100 IYTDYKLDESYTPSRVSVRAGTNFNDLQEIEVVDLNEPS---GWVKIPIKDIHDKPIRTY 156
I D+SY P +V+V G N +DLQE+ D++ PS G+V + + + +
Sbjct: 303 IAVA-ATDQSYMPQQVTVAVGRNASDLQEVR--DVHIPSNVTGYVTL----LENANVSQL 355
Query: 157 MIQIAVMSNHQNGRDTHMRQIK 178
+QI + +G DT + ++
Sbjct: 356 YVQINIKRCLSDGCDTRIHGLR 377
>sp|Q14999|CUL7_HUMAN Cullin-7 OS=Homo sapiens GN=CUL7 PE=1 SV=2
Length = 1698
Score = 35.8 bits (81), Expect = 0.33, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 32/144 (22%)
Query: 42 QLRDDCMDTYWQSDGQL-PHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICI 100
+L D TYW+S+G H + + RR + RQL LV +
Sbjct: 855 KLTDHNPKTYWESNGSAGSHYITLHMRRGILI------RQLTLLVASE------------ 896
Query: 101 YTDYKLDESYTPSRVSVRAGTNFNDLQ-EIEVVDLNEPSGWVKIPIKDIHDKPIRTY-MI 158
D SY P+RV V G + + L E+ V++ PS I ++++ R + +I
Sbjct: 897 ------DSSYMPARVVVCGGDSTSSLHTELNSVNV-MPSASRVILLENL----TRFWPII 945
Query: 159 QIAVMSNHQNGRDTHMRQIKVYSP 182
QI + Q G DT +R +++ P
Sbjct: 946 QIRIKRCQQGGIDTRIRGLEILGP 969
>sp|Q5JZY3|EPHAA_HUMAN Ephrin type-A receptor 10 OS=Homo sapiens GN=EPHA10 PE=2 SV=1
Length = 1008
Score = 35.0 bits (79), Expect = 0.66, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 138 SGWVKIPIKDIHDKPIRTYMIQIAVMSNHQN----GRDTHMRQIKVYSPVQQHPSTMFTT 193
+GW +I D HD+PIRTY + + N N G + R +++ +Q FT
Sbjct: 56 NGWEEISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQ------FTL 109
Query: 194 VECQQVSVRAGT 205
+C + AGT
Sbjct: 110 RDCSSIPGAAGT 121
Score = 31.2 bits (69), Expect = 8.5, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 222 SGWVKIPIKDIHDKPIRTYMIQIAVMSNHQN 252
+GW +I D HD+PIRTY + + N N
Sbjct: 56 NGWEEISGVDEHDRPIRTYQVCNVLEPNQDN 86
>sp|Q80TT8|CUL9_MOUSE Cullin-9 OS=Mus musculus GN=Cul9 PE=2 SV=2
Length = 1865
Score = 34.7 bits (78), Expect = 0.77, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 56/143 (39%), Gaps = 30/143 (20%)
Query: 42 QLRDDCMDTYWQSDGQL-PHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICI 100
+L D TYW+S+G H + + R + RQL LV +
Sbjct: 521 KLTDRNPKTYWESNGSTGSHSITLHMHRGVLI------RQLTLLVASE------------ 562
Query: 101 YTDYKLDESYTPSRVSVRAGTNFNDLQ-EIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQ 159
D SY P+RV V G N + E+ V++ + V + PI IQ
Sbjct: 563 ------DSSYMPARVVVFGGDNVGCISTELNTVNVMPSASRVTLLENLTRFWPI----IQ 612
Query: 160 IAVMSNHQNGRDTHMRQIKVYSP 182
I + Q G DT +R ++V P
Sbjct: 613 IRIKRCQQGGIDTRVRGVEVLGP 635
>sp|Q8IWT3|CUL9_HUMAN Cullin-9 OS=Homo sapiens GN=CUL9 PE=1 SV=2
Length = 2517
Score = 34.7 bits (78), Expect = 0.90, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 32/144 (22%)
Query: 42 QLRDDCMDTYWQSDGQL-PHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICI 100
+L D TYW+S+G H + + R V RQL LV +
Sbjct: 1184 KLTDHNPKTYWESNGSTGSHYITLHMHRGVLV------RQLTLLVASE------------ 1225
Query: 101 YTDYKLDESYTPSRVSVRAGTNFNDL-QEIEVVDLNEPSGWVKIPIKDIHD-KPIRTYMI 158
D SY P+RV V G + + + E+ V++ PS I +++++ PI I
Sbjct: 1226 ------DSSYMPARVVVFGGDSTSCIGTELNTVNV-MPSASRVILLENLNRFWPI----I 1274
Query: 159 QIAVMSNHQNGRDTHMRQIKVYSP 182
QI + Q G DT +R ++V P
Sbjct: 1275 QIRIKRCQQGGIDTRVRGVEVLGP 1298
>sp|Q5EA20|HPPD_BOVIN 4-hydroxyphenylpyruvate dioxygenase OS=Bos taurus GN=HPD PE=2 SV=3
Length = 393
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 19/174 (10%)
Query: 83 HLVNVQFRRKTTVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQEIEVVDLNEPS-GWV 141
+L N+QF R +V D ++T+Y S+R+ N + I+ + +NEP+ G
Sbjct: 200 YLKNLQFHRFWSVDDTQVHTEYS----------SLRSVVVANYEESIK-MPINEPAPGKK 248
Query: 142 KIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTV--ECQQV 199
K I++ D + IA+ + H+R+ V PST + + + +
Sbjct: 249 KSQIQEYVDYNGGAGVQHIALKTKDIITAIRHLRERGV--EFLAVPSTYYKQLREKLKMA 306
Query: 200 SVRAGTNFNDLQEIEV-VDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQN 252
+R N + L+E+++ VD +E ++I K + D+P T +++ NHQ
Sbjct: 307 KIRVKENIDILEELKILVDYDEKGYLLQIFTKPMQDRP--TLFLEVIQRHNHQG 358
>sp|Q5SSH7|ZZEF1_MOUSE Zinc finger ZZ-type and EF-hand domain-containing protein 1 OS=Mus
musculus GN=Zzef1 PE=1 SV=2
Length = 2924
Score = 33.9 bits (76), Expect = 1.6, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 50 TYWQSDGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICIYTDYKLDES 109
+YWQSDG H + ++ + ++ + I D+S
Sbjct: 275 SYWQSDGS----------------------ARSHWIRLKMKPDVVLRHLSIAVA-ATDQS 311
Query: 110 YTPSRVSVRAGTNFNDLQEIEVVDLNEPS---GWVKIPIKDIHDKPIRTYMIQIAVMSNH 166
Y P +V+V G + +DLQE+ D++ PS G+V + + + I +QI +
Sbjct: 312 YMPQQVTVAVGRSASDLQEVR--DVHIPSNVTGYVTL----LENANISQLYVQINIKRCL 365
Query: 167 QNGRDTHMRQIK 178
+G DT + ++
Sbjct: 366 SDGCDTRIHGLR 377
>sp|Q8BYG9|EPHAA_MOUSE Ephrin type-A receptor 10 OS=Mus musculus GN=Epha10 PE=2 SV=2
Length = 1007
Score = 33.5 bits (75), Expect = 2.1, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Query: 138 SGWVKIPIKDIHDKPIRTYMIQIAVMSNHQN----GRDTHMRQIKVYSPVQQHPSTMFTT 193
+GW +I D HD+PIRTY + + N N G + R +++ +Q FT
Sbjct: 56 TGWEEISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQ------FTL 109
Query: 194 VECQQVSVRAGT 205
+C + GT
Sbjct: 110 RDCSSIPGATGT 121
Score = 31.6 bits (70), Expect = 7.6, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 222 SGWVKIPIKDIHDKPIRTYMIQIAVMSNHQN 252
+GW +I D HD+PIRTY + + N N
Sbjct: 56 TGWEEISGVDEHDRPIRTYQVCNVLEPNQDN 86
>sp|Q99P69|NUF2_MOUSE Kinetochore protein Nuf2 OS=Mus musculus GN=Nuf2 PE=2 SV=2
Length = 463
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 79 RQLPHLVNVQFRRKTTVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQEIEVVDLNEPS 138
++L HL+N +FR+KTT+ L E Y + + T + Q++ +V L E
Sbjct: 188 QELQHLLNEEFRQKTTL----------LQEEYAKMKSDISEKTKHLNEQKLSLVSLKEVE 237
Query: 139 GWVKIPIKDIHDKPIRTYMIQI-AVMSNHQNGRDTHMRQIKVY 180
+K I D +K ++ Y ++ + ++ R+ M Q +Y
Sbjct: 238 DNLKSKIVDSPEK-LKNYKDKMKGTVQKLRSAREKVMEQYDIY 279
>sp|P32754|HPPD_HUMAN 4-hydroxyphenylpyruvate dioxygenase OS=Homo sapiens GN=HPD PE=1
SV=2
Length = 393
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 81/174 (46%), Gaps = 19/174 (10%)
Query: 83 HLVNVQFRRKTTVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQEIEVVDLNEPS-GWV 141
+L N+QF R +V D ++T+Y S+R+ N + I+ + +NEP+ G
Sbjct: 200 YLKNLQFHRFWSVDDTQVHTEYS----------SLRSIVVANYEESIK-MPINEPAPGKK 248
Query: 142 KIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTV--ECQQV 199
K I++ D + IA+ + H+R+ + PST + + + +
Sbjct: 249 KSQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRERGL--EFLSVPSTYYKQLREKLKTA 306
Query: 200 SVRAGTNFNDLQEIEV-VDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQN 252
++ N + L+E+++ VD +E ++I K + D+P T +++ NHQ
Sbjct: 307 KIKVKENIDALEELKILVDYDEKGYLLQIFTKPVQDRP--TLFLEVIQRHNHQG 358
>sp|Q5F3X8|SC31A_CHICK Protein transport protein Sec31A OS=Gallus gallus GN=SEC31A PE=2
SV=1
Length = 1227
Score = 32.3 bits (72), Expect = 4.6, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 177 IKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQEIEVVDLNEPS 222
++ +SP QQHP + T QQ+ TN + EI +DL++PS
Sbjct: 11 MQAWSPAQQHPIYLATGTSAQQLDASFSTNAS--LEIFELDLSDPS 54
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,229,807
Number of Sequences: 539616
Number of extensions: 4350414
Number of successful extensions: 10047
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 10000
Number of HSP's gapped (non-prelim): 43
length of query: 287
length of database: 191,569,459
effective HSP length: 116
effective length of query: 171
effective length of database: 128,974,003
effective search space: 22054554513
effective search space used: 22054554513
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)