Query psy5867
Match_columns 287
No_of_seqs 213 out of 404
Neff 4.8
Searched_HMMs 29240
Date Fri Aug 16 20:02:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5867.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5867hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gqp_A DOC1/APC10; cell cycle, 100.0 3.4E-59 1.2E-63 421.0 15.1 169 14-287 46-221 (221)
2 1jhj_A APC10; beta sandwich, j 100.0 1.5E-52 5.2E-57 365.5 15.9 157 6-185 7-163 (171)
3 1jhj_A APC10; beta sandwich, j 100.0 2.5E-32 8.5E-37 238.1 7.2 135 130-270 20-164 (171)
4 1tvg_A LOC51668 protein; cell 99.3 2.3E-11 7.9E-16 103.6 15.3 123 25-183 19-147 (153)
5 1gqp_A DOC1/APC10; cell cycle, 99.3 2.1E-13 7.3E-18 122.9 1.9 120 129-269 50-179 (221)
6 2yc2_A IFT25, intraflagellar t 99.3 3.7E-11 1.3E-15 99.9 14.9 120 27-182 13-138 (139)
7 3f2z_A Uncharacterized protein 98.9 3.1E-08 1.1E-12 82.2 15.3 131 26-185 7-151 (159)
8 4a41_A GH89_CBM32-5, alpha-N-a 98.9 5.5E-08 1.9E-12 81.7 15.4 126 25-181 26-161 (161)
9 3ggl_A Putative chitobiase; X- 98.8 3.5E-07 1.2E-11 77.0 16.1 131 26-185 17-161 (169)
10 2j1a_A Hyaluronidase, CBM32; p 98.7 4.8E-07 1.6E-11 72.5 15.6 123 30-181 15-150 (150)
11 2jda_A Yecbm32; hypothetical p 98.4 2.6E-05 8.9E-10 62.5 16.4 124 27-184 11-138 (145)
12 2v72_A CBM32, EXO-alpha-sialid 98.3 2.2E-05 7.5E-10 62.4 13.7 124 26-180 13-142 (143)
13 3hnm_A Putative chitobiase; PS 98.2 3E-05 1E-09 66.7 14.0 115 38-180 39-161 (172)
14 1w8o_A Bacterial sialidase; 3D 98.0 0.00015 5E-09 71.2 16.3 127 27-182 461-600 (601)
15 1k3i_A Galactose oxidase precu 97.9 0.00017 5.7E-09 71.5 14.0 129 27-183 29-166 (656)
16 4a3z_A GH89_CBM32, alpha-N-ace 97.9 0.00022 7.4E-09 60.5 12.6 81 21-128 27-108 (161)
17 4a42_A GH89_CBM32-4, alpha-N-a 97.8 0.00024 8.1E-09 58.9 11.7 116 25-180 30-147 (149)
18 2v5d_A O-GLCNACASE NAGJ; famil 97.5 0.0021 7.2E-08 66.3 15.6 122 30-181 602-737 (737)
19 4gwi_A Lectinolysin, platelet 97.4 0.0063 2.2E-07 50.9 14.8 124 26-184 15-148 (153)
20 3lei_A Platelet aggregation fa 97.3 0.016 5.5E-07 47.7 16.1 126 23-183 12-147 (153)
21 4a4a_A Alpha-N-acetylglucosami 97.2 0.0067 2.3E-07 64.3 15.5 133 20-187 24-158 (914)
22 2j1v_A Fucolectin-related prot 97.1 0.024 8.4E-07 47.0 15.8 77 21-123 16-100 (151)
23 1k12_A Lectin; beta barrel, pr 97.0 0.015 5.1E-07 48.4 13.0 128 22-182 10-153 (158)
24 3f2z_A Uncharacterized protein 96.9 0.0096 3.3E-07 48.8 11.3 98 155-269 54-151 (159)
25 3eyp_A Putative alpha-L-fucosi 96.8 0.0091 3.1E-07 58.8 12.0 128 23-183 327-457 (469)
26 2j22_A Fucolectin-related prot 96.7 0.1 3.5E-06 43.1 15.8 76 22-123 14-97 (148)
27 2yfu_A Carbohydrate binding fa 96.6 0.011 3.8E-07 50.2 9.5 125 21-182 10-139 (155)
28 3ggl_A Putative chitobiase; X- 96.4 0.035 1.2E-06 46.2 11.3 98 155-269 64-161 (169)
29 3cqo_A FBP32; F-lectin, fucole 96.3 0.038 1.3E-06 50.0 11.8 72 27-123 158-235 (293)
30 3ues_A Alpha-1,3/4-fucosidase; 96.2 0.077 2.6E-06 52.4 14.4 39 27-67 359-398 (478)
31 2j1a_A Hyaluronidase, CBM32; p 95.8 0.14 4.9E-06 40.1 11.6 94 155-265 52-150 (150)
32 3cqo_A FBP32; F-lectin, fucole 95.7 0.16 5.6E-06 45.7 13.2 127 24-182 7-146 (293)
33 2zxq_A Endo-alpha-N-acetylgala 95.0 0.0043 1.5E-07 67.9 0.0 127 28-183 1226-1375(1376)
34 1tvg_A LOC51668 protein; cell 94.8 0.21 7.1E-06 42.0 10.0 100 150-267 42-147 (153)
35 2yc2_A IFT25, intraflagellar t 94.3 0.3 1E-05 39.9 9.7 83 165-265 52-137 (139)
36 4a41_A GH89_CBM32-5, alpha-N-a 92.5 1.6 5.4E-05 35.9 11.4 92 155-265 70-161 (161)
37 1xoy_A Hypothetical protein AT 91.8 2 6.7E-05 36.6 11.3 105 49-182 49-160 (161)
38 3bn6_A Lactadherin; anticoagul 90.9 1.8 6.2E-05 35.5 10.0 113 27-166 15-146 (158)
39 2jda_A Yecbm32; hypothetical p 89.8 4.4 0.00015 31.5 11.0 93 156-268 44-138 (145)
40 1w8o_A Bacterial sialidase; 3D 89.6 2.9 9.9E-05 40.6 11.7 91 166-267 510-601 (601)
41 1wwy_A Thioredoxin-like protei 89.5 1.9 6.4E-05 37.1 9.2 118 38-184 30-156 (171)
42 2v72_A CBM32, EXO-alpha-sialid 88.3 5 0.00017 30.9 10.3 92 154-264 51-142 (143)
43 1xoy_A Hypothetical protein AT 88.1 2.5 8.5E-05 36.0 8.9 88 166-265 64-159 (161)
44 4dxt_A SUN domain-containing p 87.8 4.2 0.00015 35.4 10.4 29 238-266 167-195 (198)
45 2y38_A Laminin subunit alpha-5 87.2 0.45 1.5E-05 46.1 4.1 30 37-67 80-113 (403)
46 2qqj_A Neuropilin-2; VEGF rece 86.6 10 0.00034 34.5 12.7 42 26-67 20-64 (325)
47 4dxt_A SUN domain-containing p 86.6 8.3 0.00028 33.6 11.6 113 45-183 76-196 (198)
48 2w1s_A Hyaluronoglucosaminidas 86.3 12 0.00042 31.8 12.4 98 39-164 39-147 (192)
49 2qqi_A Neuropilin-1; VEGF rece 83.6 9.9 0.00034 34.5 11.1 42 26-67 20-63 (318)
50 1czt_A Protein (coagulation fa 83.3 17 0.00059 29.6 11.8 41 27-67 16-64 (160)
51 4aqt_A Laminin subunit gamma-1 81.7 3.6 0.00012 39.3 7.6 30 38-67 70-107 (375)
52 3zyj_B Netrin-G1; cell adhesio 80.3 2.2 7.5E-05 41.6 5.7 31 37-67 100-137 (426)
53 3tbd_A Netrin-G2, laminet-2; l 80.0 3.9 0.00013 38.8 7.1 33 35-67 70-109 (338)
54 2wuh_A Discoidin domain recept 78.8 24 0.00081 29.6 11.1 126 26-182 31-173 (178)
55 4deq_A Neuropilin-1, vascular 77.1 26 0.00089 30.7 11.3 42 26-67 19-62 (218)
56 3ecq_A Protein SPR0328, endo-a 73.8 0.67 2.3E-05 51.0 0.0 35 33-67 1465-1502(1531)
57 2qqi_A Neuropilin-1; VEGF rece 73.7 18 0.00062 32.7 9.6 77 27-127 177-259 (318)
58 1wwy_A Thioredoxin-like protei 71.9 14 0.00049 31.6 7.9 91 166-266 55-154 (171)
59 1sdd_B Coagulation factor V; c 71.8 43 0.0015 33.3 12.6 43 25-67 342-391 (647)
60 2qqm_A Neuropilin-1; VEGF rece 68.5 50 0.0017 31.1 11.8 78 27-127 309-391 (450)
61 2cho_A Glucosaminidase, hexosa 68.4 2.4 8E-05 43.8 2.6 42 39-103 604-649 (716)
62 1k3i_A Galactose oxidase precu 64.6 46 0.0016 32.5 11.0 98 155-268 69-167 (656)
63 2v5d_A O-GLCNACASE NAGJ; famil 63.6 49 0.0017 33.9 11.3 94 155-265 639-737 (737)
64 2qqj_A Neuropilin-2; VEGF rece 59.3 1E+02 0.0034 27.7 13.8 42 26-67 177-223 (325)
65 2wuh_A Discoidin domain recept 58.4 35 0.0012 28.6 7.7 93 155-265 72-172 (178)
66 4aqs_A Laminin subunit beta-1; 55.3 19 0.00064 35.0 6.2 20 47-67 90-109 (525)
67 2vm9_A Discoidin-2, discoidin 51.8 1.3E+02 0.0043 26.6 14.9 129 25-186 14-158 (257)
68 3bn6_A Lactadherin; anticoagul 51.0 52 0.0018 26.5 7.4 92 155-265 57-157 (158)
69 2qqk_A Neuropilin-2; VEGF rece 50.9 1.4E+02 0.005 28.9 11.9 42 26-67 425-471 (579)
70 1czt_A Protein (coagulation fa 49.0 58 0.002 26.4 7.4 92 156-266 57-157 (160)
71 4a42_A GH89_CBM32-4, alpha-N-a 48.3 1E+02 0.0035 24.6 9.2 80 166-264 67-147 (149)
72 3hny_M Coagulation factor VIII 46.3 1.2E+02 0.004 24.6 13.2 42 26-67 18-66 (159)
73 2qqo_A Neuropilin-2; VEGF rece 43.5 2.1E+02 0.0073 26.9 12.8 42 26-67 306-352 (460)
74 2btv_A T2A, T2B, protein (VP3 37.8 30 0.001 36.4 4.7 71 40-115 762-839 (901)
75 3lqc_A DNA repair protein XRCC 37.7 11 0.00038 33.0 1.3 69 26-124 7-77 (189)
76 2vm9_A Discoidin-2, discoidin 37.4 1.5E+02 0.005 26.1 8.8 93 155-268 60-156 (257)
77 2qqm_A Neuropilin-1; VEGF rece 37.2 55 0.0019 30.8 6.2 41 27-67 153-195 (450)
78 3hny_M Coagulation factor VIII 30.1 1.9E+02 0.0065 23.3 7.7 92 155-265 58-156 (159)
79 2w1s_A Hyaluronoglucosaminidas 26.8 2.8E+02 0.0095 23.2 10.0 91 156-263 66-160 (192)
80 4gwi_A Lectinolysin, platelet 26.7 2.5E+02 0.0086 22.6 9.5 31 236-269 119-149 (153)
81 1k12_A Lectin; beta barrel, pr 23.3 2.8E+02 0.0097 22.1 7.9 28 236-267 127-154 (158)
82 4a3z_A GH89_CBM32, alpha-N-ace 22.1 3.2E+02 0.011 22.2 9.9 91 155-265 66-161 (161)
No 1
>1gqp_A DOC1/APC10; cell cycle, APC10/DOC1, APC/cyclosome, ubiquitination, E3 ubiquitin ligase, beta sandwich, jelly roll; 2.2A {Saccharomyces cerevisiae} SCOP: b.18.1.9
Probab=100.00 E-value=3.4e-59 Score=420.95 Aligned_cols=169 Identities=33% Similarity=0.534 Sum_probs=137.2
Q ss_pred HHhcCCceeecCcceEEEeccCCCCCccccccCCCCceeccCCCCCcEEEEEEcccccccchhhhcccCceeeeeeeeee
Q psy5867 14 EERLGRIREVGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQSDGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKT 93 (287)
Q Consensus 14 ~~~~~~~~~i~~~a~W~vSS~K~g~gv~~L~d~~~~tyWQSdg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~ 93 (287)
++..+.++|||++|.|+|||+|+|+||++|||+|++|||||||+|||+|+|+|. |++
T Consensus 46 ~~~~~~l~eI~~~A~WsvSS~K~g~gV~~L~D~s~~TyWQSDG~qPH~ItI~f~-----------------------k~v 102 (221)
T 1gqp_A 46 ILDSARMINVTHLALWKPSSFKLGNPVDFALDDNYDTFWQSDGGQPHQLDIMFS-----------------------KRM 102 (221)
T ss_dssp HHHTSSEEECGGGSEEEESCCCTTCCGGGGSSSCTTCCEECCSSSSEEEEEEEE-----------------------EEE
T ss_pred ecccCCceeccCceEEEEecCCCcCCHHHhcCCCccceeccCCCCCeEEEEEEc-----------------------CCc
Confidence 456678999999999999999999999999999999999999999999999999 999
Q ss_pred eEEEEEEEeecCCCCCcCcceEEEeecCCcCCceeeeEEEccCCCceEEEEeccCCCCceeEEEEEEEEEeeeecCccce
Q psy5867 94 TVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTH 173 (287)
Q Consensus 94 ~i~~i~i~~~~~~DeSYtPs~I~i~~G~~~~dL~e~~~v~~~~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qfGrdth 173 (287)
.|+.|+||+||++||||||++|+|+||++++||+|+++++|++|.||+.|++++.
T Consensus 103 ~I~~L~iyvD~~~DeSYtPs~I~V~aG~~~~dL~e~~~v~l~~p~GWv~i~l~d~------------------------- 157 (221)
T 1gqp_A 103 DICVMAIFFSMIADESYAPSLVKVYAGHSPSDARFYKMLEVRNVNGWVALRFLDN------------------------- 157 (221)
T ss_dssp EECEEEEEEEHHHHGGGSEEEEEEEEESSTTTCEEEEEEEEEECEEEEEECCC---------------------------
T ss_pred eEEEEEEEECCCCCCCCCCEEEEEEEeCCcCcceEEEEEEecCCCEEEEEEccCC-------------------------
Confidence 9999999999999999999999999999999999999999999999999987420
Q ss_pred eEEEEEecCCCCCCCCccccceeeEeeeecCCCccCcceeeeeeccCCCCeEEEeccCCCCCceEEEEEEEEEeecccCC
Q psy5867 174 MRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNG 253 (287)
Q Consensus 174 IrqIkIy~~~~~des~~fTSytpskISiraG~~~~Dl~ev~~~~l~eP~GWv~i~l~~~~~~~lr~~~lQi~Il~NHqNG 253 (287)
..++++++||+|||+|++|||||
T Consensus 158 ---------------------------------------------------------~~~~~~l~~~~IQI~I~~nhqnG 180 (221)
T 1gqp_A 158 ---------------------------------------------------------REDDQLLKCQFIRLLFPVNHENG 180 (221)
T ss_dssp ---------------------------------------------------------------EEEEEEEEEEEEESTTC
T ss_pred ---------------------------------------------------------CCCCCeeEEEEEEEEEeeccCCC
Confidence 01346789999999999999999
Q ss_pred CcceeeeeEEeccCCCCC-------CCccccceeeeeeccC
Q psy5867 254 RDTHMRQIKVYSPVQQHP-------STMFTTVECQQYAVIR 287 (287)
Q Consensus 254 rDTHIR~ikI~gP~~~~~-------~~~ftt~~f~~~~~iR 287 (287)
|||||||||||||+.... ....++++|.+|++||
T Consensus 181 rDThIRqIkI~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~r 221 (221)
T 1gqp_A 181 KDTHLRGIRLYVPSNEPHQDTHEWAQTLPETNNVFQDAILR 221 (221)
T ss_dssp SSCEESCEEEEEEC---------------------------
T ss_pred CccEEEEEEEEccCCccchhccccccCcccChhhhhheecC
Confidence 999999999999986421 1234999999999998
No 2
>1jhj_A APC10; beta sandwich, jellyroll, cell cycle; 1.60A {Homo sapiens} SCOP: b.18.1.9
Probab=100.00 E-value=1.5e-52 Score=365.54 Aligned_cols=157 Identities=69% Similarity=1.198 Sum_probs=151.2
Q ss_pred CCCCCchHHHhcCCceeecCcceEEEeccCCCCCccccccCCCCceeccCCCCCcEEEEEEcccccccchhhhcccCcee
Q psy5867 6 IFEKDPVMEERLGRIREVGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQSDGQLPHLVNVQFRRKTTVQDICIYRQLPHLV 85 (287)
Q Consensus 6 ~~~~~~~~~~~~~~~~~i~~~a~W~vSS~K~g~gv~~L~d~~~~tyWQSdg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~ 85 (287)
+...||..+|+.+.++|||++|.|+|||+|+|+|+++|+|++++|||||||+|||||+|+|.
T Consensus 7 ~~~~~~~~~~~~~~~~ei~~~a~w~vSS~k~g~gv~~L~D~~~~TyWqSdg~qpH~I~i~f~------------------ 68 (171)
T 1jhj_A 7 PPGADPKQLERTGTVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFR------------------ 68 (171)
T ss_dssp CCCCCHHHHHHTTSEEECGGGEEEEESCCBTTBSTHHHHSSCTTCCEECCSSSSEEEEEEEE------------------
T ss_pred ccccCchhhcccCCceEccCCeEEEEEecCCCCChHHcCCCCCCeeEccCCCCCeEEEEEEC------------------
Confidence 45699999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeeeEEEEEEEeecCCCCCcCcceEEEeecCCcCCceeeeEEEccCCCceEEEEeccCCCCceeEEEEEEEEEee
Q psy5867 86 NVQFRRKTTVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSN 165 (287)
Q Consensus 86 ~~~~~k~~~i~~i~i~~~~~~DeSYtPs~I~i~~G~~~~dL~e~~~v~~~~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n 165 (287)
|++.|++|+||+||++||||||++|+|+||++++||+|+++++|++|.||+.|++.+..++++++|+|||+|+.|
T Consensus 69 -----k~v~i~~l~i~vd~~~DeSYtPs~I~v~aG~~~~dL~ei~~v~l~~p~Gwv~i~l~~~~~~~~~~~~IQI~I~~n 143 (171)
T 1jhj_A 69 -----RKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLAN 143 (171)
T ss_dssp -----EEEEECEEEEEEEHHHHGGGSEEEEEEEEESSTTSCEEEEEEECSSCEEEEEEECBCTTSSBEEEEEEEEEEEEE
T ss_pred -----CCceEEEEEEEECCCCCCCCCcEEEEEEEeCCcccceeEEEEEccCCCEEEEEEeccCCCCceeEEEEEEEEecc
Confidence 999999999999999999999999999999999999999999999999999999988778899999999999999
Q ss_pred eecCccceeEEEEEecCCCC
Q psy5867 166 HQNGRDTHMRQIKVYSPVQQ 185 (287)
Q Consensus 166 ~qfGrdthIrqIkIy~~~~~ 185 (287)
||+|||||||+|+||++...
T Consensus 144 hqnG~DthIR~ikI~G~~~~ 163 (171)
T 1jhj_A 144 HQNGRDTHMRQIKIYTPVEE 163 (171)
T ss_dssp GGGCSSCEECEEEEEEEC--
T ss_pred CCCCCccEEEEEEEEecCCC
Confidence 99999999999999999643
No 3
>1jhj_A APC10; beta sandwich, jellyroll, cell cycle; 1.60A {Homo sapiens} SCOP: b.18.1.9
Probab=99.97 E-value=2.5e-32 Score=238.12 Aligned_cols=135 Identities=43% Similarity=0.741 Sum_probs=120.2
Q ss_pred eEEEccCCCceEEEEeccC------CCCceeEEEE----EEEEEeeeecCccceeEEEEEecCCCCCCCCccccceeeEe
Q psy5867 130 EVVDLNEPSGWVKIPIKDI------HDKPIRTYMI----QIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQV 199 (287)
Q Consensus 130 ~~v~~~~p~Gwv~i~~~~~------~d~~l~~f~i----Qi~I~~n~qfGrdthIrqIkIy~~~~~des~~fTSytpskI 199 (287)
...++.+-+.|...+.+.. .|++..+||. | ++.++++|.+++.|++|++|.++..|+ ||+|++|
T Consensus 20 ~~~ei~~~a~w~vSS~k~g~gv~~L~D~~~~TyWqSdg~q-pH~I~i~f~k~v~i~~l~i~vd~~~De-----SYtPs~I 93 (171)
T 1jhj_A 20 TVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQ-PHLVNIQFRRKTTVKTLCIYADYKSDE-----SYTPSKI 93 (171)
T ss_dssp SEEECGGGEEEEESCCBTTBSTHHHHSSCTTCCEECCSSS-SEEEEEEEEEEEEECEEEEEEEHHHHG-----GGSEEEE
T ss_pred CceEccCCeEEEEEecCCCCChHHcCCCCCCeeEccCCCC-CeEEEEEECCCceEEEEEEEECCCCCC-----CCCcEEE
Confidence 4466777777876665541 3677888887 7 999999999999999999999998899 8999999
Q ss_pred eeecCCCccCcceeeeeeccCCCCeEEEeccCCCCCceEEEEEEEEEeecccCCCcceeeeeEEeccCCCC
Q psy5867 200 SVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQH 270 (287)
Q Consensus 200 SiraG~~~~Dl~ev~~~~l~eP~GWv~i~l~~~~~~~lr~~~lQi~Il~NHqNGrDTHIR~ikI~gP~~~~ 270 (287)
+|+||++++||.++.+++|++|.||+.|++.+.++++++||+|||+|++||||||||||||||||||++..
T Consensus 94 ~v~aG~~~~dL~ei~~v~l~~p~Gwv~i~l~~~~~~~~~~~~IQI~I~~nhqnG~DthIR~ikI~G~~~~~ 164 (171)
T 1jhj_A 94 SVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIKIYTPVEES 164 (171)
T ss_dssp EEEEESSTTSCEEEEEEECSSCEEEEEEECBCTTSSBEEEEEEEEEEEEEGGGCSSCEECEEEEEEEC---
T ss_pred EEEEeCCcccceeEEEEEccCCCEEEEEEeccCCCCceeEEEEEEEEeccCCCCCccEEEEEEEEecCCCC
Confidence 99999999999999999999999999999999889999999999999999999999999999999998753
No 4
>1tvg_A LOC51668 protein; cell cycle, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Homo sapiens} SCOP: b.18.1.9 PDB: 1xpw_A
Probab=99.35 E-value=2.3e-11 Score=103.61 Aligned_cols=123 Identities=15% Similarity=0.253 Sum_probs=101.6
Q ss_pred CcceEEE---eccCCCCCccccccCCCCceeccCCCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEEEE
Q psy5867 25 SQAIWSL---SSCKPGFGVDQLRDDCMDTYWQSDGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICIY 101 (287)
Q Consensus 25 ~~a~W~v---SS~K~g~gv~~L~d~~~~tyWQSdg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~i~ 101 (287)
+-+.|+| ||.++++|.++|+|+|++|||.|+|..||+|.|+|. +.+.|.+|.|.
T Consensus 19 ~~~g~~v~~ass~~~~~~~~~~iDgn~~T~W~t~g~~Pq~i~Idf~-----------------------k~~~is~~~i~ 75 (153)
T 1tvg_A 19 SSEGSEVILATSSDEKHPPENIIDGNPETFWTTTGMFPQEFIICFH-----------------------KHVRIERLVIQ 75 (153)
T ss_dssp GGGTCEEECCSCCCTTSCGGGGGSSCTTCCEECCSCSSEEEEEEEE-----------------------EEEEEEEEEEE
T ss_pred ccCCcEEEEecccCcccCHHHcCcCCCCceEECCCCCCcEEEEECC-----------------------CceEEEEEEEE
Confidence 3566776 778899999999999999999999999999999999 99999999997
Q ss_pred eecCCCCCcCcceEEEeecCCcC--CceeeeEEEccCCCceEEE-EeccCCCCceeEEEEEEEEEeeeecCccceeEEEE
Q psy5867 102 TDYKLDESYTPSRVSVRAGTNFN--DLQEIEVVDLNEPSGWVKI-PIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIK 178 (287)
Q Consensus 102 ~~~~~DeSYtPs~I~i~~G~~~~--dL~e~~~v~~~~p~Gwv~i-~~~~~~d~~l~~f~iQi~I~~n~qfGrdthIrqIk 178 (287)
. |.++.+.|.+..+.. +++++...++....|+..+ .+. .+.++.+|+|.|+.+..+- ..|..|.
T Consensus 76 ~-------~~vk~~~ie~s~d~~p~~w~~i~e~ef~~~~n~~Q~~~~~----~~~~a~~lRl~i~s~~d~f--v~Iy~l~ 142 (153)
T 1tvg_A 76 S-------YFVQTLKIEKSTSKEPVDFEQWIEKDLVHTEGQLQNEEIV----AHGSATYLRFIIVSAFDHF--ASVHSVS 142 (153)
T ss_dssp E-------ESEEEEEEEEECSSSSCCCEEEEEEECCCCTTCCEEEEEC----CCEEEEEEEEEEEEESSSC--CEEEEEE
T ss_pred e-------cCCEEEEEEEECCCCCcceEEeEEEEecCCCCcEEEEEcC----CCceeEEEEEEEEcccccE--EEEEEEE
Confidence 3 458889998887765 9999999999888776533 331 2567889999999888764 8888888
Q ss_pred EecCC
Q psy5867 179 VYSPV 183 (287)
Q Consensus 179 Iy~~~ 183 (287)
+++..
T Consensus 143 v~G~~ 147 (153)
T 1tvg_A 143 AEGTV 147 (153)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88754
No 5
>1gqp_A DOC1/APC10; cell cycle, APC10/DOC1, APC/cyclosome, ubiquitination, E3 ubiquitin ligase, beta sandwich, jelly roll; 2.2A {Saccharomyces cerevisiae} SCOP: b.18.1.9
Probab=99.33 E-value=2.1e-13 Score=122.94 Aligned_cols=120 Identities=12% Similarity=0.174 Sum_probs=94.8
Q ss_pred eeEEEccCCCceEEEEecc------CCCCceeEEEE----EEEEEeeeecCccceeEEEEEecCCCCCCCCccccceeeE
Q psy5867 129 IEVVDLNEPSGWVKIPIKD------IHDKPIRTYMI----QIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQ 198 (287)
Q Consensus 129 ~~~v~~~~p~Gwv~i~~~~------~~d~~l~~f~i----Qi~I~~n~qfGrdthIrqIkIy~~~~~des~~fTSytpsk 198 (287)
-...++.+.+-|...+.+. -.|++..+||. | +|.++++|.|++.|+.|++|.++..|+ ||||++
T Consensus 50 ~~l~eI~~~A~WsvSS~K~g~gV~~L~D~s~~TyWQSDG~q-PH~ItI~f~k~v~I~~L~iyvD~~~De-----SYtPs~ 123 (221)
T 1gqp_A 50 ARMINVTHLALWKPSSFKLGNPVDFALDDNYDTFWQSDGGQ-PHQLDIMFSKRMDICVMAIFFSMIADE-----SYAPSL 123 (221)
T ss_dssp SSEEECGGGSEEEESCCCTTCCGGGGSSSCTTCCEECCSSS-SEEEEEEEEEEEEECEEEEEEEHHHHG-----GGSEEE
T ss_pred CCceeccCceEEEEecCCCcCCHHHhcCCCccceeccCCCC-CeEEEEEEcCCceEEEEEEEECCCCCC-----CCCCEE
Confidence 3556777778887655543 14778889997 7 999999999999999999999999999 899999
Q ss_pred eeeecCCCccCcceeeeeeccCCCCeEEEeccCCCCCceEEEEEEEEEeecccCCCcceeeeeEEeccCCC
Q psy5867 199 VSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQ 269 (287)
Q Consensus 199 ISiraG~~~~Dl~ev~~~~l~eP~GWv~i~l~~~~~~~lr~~~lQi~Il~NHqNGrDTHIR~ikI~gP~~~ 269 (287)
|+|+||++++||.|+++++|++|.||+.|+| . +. ..+.|.-.+++=||.|.+-.+.
T Consensus 124 I~V~aG~~~~dL~e~~~v~l~~p~GWv~i~l-~--d~------------~~~~~~l~~~~IQI~I~~nhqn 179 (221)
T 1gqp_A 124 VKVYAGHSPSDARFYKMLEVRNVNGWVALRF-L--DN------------REDDQLLKCQFIRLLFPVNHEN 179 (221)
T ss_dssp EEEEEESSTTTCEEEEEEEEEECEEEEEECC-C----------------------EEEEEEEEEEEEESTT
T ss_pred EEEEEeCCcCcceEEEEEEecCCCEEEEEEc-c--CC------------CCCCCeeEEEEEEEEEeeccCC
Confidence 9999999999999999999999999999876 1 11 0122224556668888776654
No 6
>2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A
Probab=99.32 E-value=3.7e-11 Score=99.94 Aligned_cols=120 Identities=13% Similarity=0.234 Sum_probs=95.7
Q ss_pred ceEEE---eccCCCCCccccccCCCCceeccCCCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEEEEee
Q psy5867 27 AIWSL---SSCKPGFGVDQLRDDCMDTYWQSDGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICIYTD 103 (287)
Q Consensus 27 a~W~v---SS~K~g~gv~~L~d~~~~tyWQSdg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~i~~~ 103 (287)
+-|++ ||.+.++|.++|+|+|++|||.|+|..||+|.|+|. +.+.|..|.|.-
T Consensus 13 ~g~~v~~~ss~~~~~~~~~~iDg~~~T~W~s~g~~pq~i~I~~~-----------------------~~~~is~~~i~~- 68 (139)
T 2yc2_A 13 NGGLVVMASCSDERFPPENMLDGKDNTFWVTTGMFPQEFVLRLE-----------------------SCIRVSKITTLS- 68 (139)
T ss_dssp TSCEECCCSCCBTTSCGGGGGSSCTTCCEECCSSSCEEEEEEEE-----------------------EEEEEEEEEEEE-
T ss_pred CCcEEEEeccCCCCCChhheECCCCCCEEeCCCCCCeEEEEECC-----------------------CceEEEEEEEEe-
Confidence 44554 677789999999999999999999999999999999 999999999873
Q ss_pred cCCCCCcCcceEEEeecCCc--CCceeeeEEEccCCCceEEE-EeccCCCCceeEEEEEEEEEeeeecCccceeEEEEEe
Q psy5867 104 YKLDESYTPSRVSVRAGTNF--NDLQEIEVVDLNEPSGWVKI-PIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVY 180 (287)
Q Consensus 104 ~~~DeSYtPs~I~i~~G~~~--~dL~e~~~v~~~~p~Gwv~i-~~~~~~d~~l~~f~iQi~I~~n~qfGrdthIrqIkIy 180 (287)
|.++.+.|.+..+. .+++++...++.+..|+..+ .+. .+..+.+|+|.|+.+..+- +.|..+.++
T Consensus 69 ------~~~k~~~ie~s~~~~p~~w~~i~~~~f~~~~~~~q~~~f~----~~~~a~~lrl~i~s~~d~f--~~iy~~~v~ 136 (139)
T 2yc2_A 69 ------LNVRKLAVEKCDQDKPDQFEKVFEVELANRGDRLQTEVHQ----VNIRAKYLKFILLQGHGEF--ATVNRVSVV 136 (139)
T ss_dssp ------ESEEEEEEEEECSSSCCCCEEEEEEECCCC--CCEEEEEE----EEEEEEEEEEEEEEESSSC--CEEEEEEEE
T ss_pred ------cCCcEEEEEEecCCCCCceEEEEEEEeecCCCCceEEEcc----CCCcEEEEEEEEEeccCce--EEEEEEEEE
Confidence 45889999887765 69999988999888776433 221 1234788999999998763 888888887
Q ss_pred cC
Q psy5867 181 SP 182 (287)
Q Consensus 181 ~~ 182 (287)
+.
T Consensus 137 G~ 138 (139)
T 2yc2_A 137 GG 138 (139)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 7
>3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A
Probab=98.93 E-value=3.1e-08 Score=82.22 Aligned_cols=131 Identities=16% Similarity=0.272 Sum_probs=101.9
Q ss_pred cceEEEecc---CCC------CCccccccCCCCceeccCC-----CCCcEEEEEEcccccccchhhhcccCceeeeeeee
Q psy5867 26 QAIWSLSSC---KPG------FGVDQLRDDCMDTYWQSDG-----QLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRR 91 (287)
Q Consensus 26 ~a~W~vSS~---K~g------~gv~~L~d~~~~tyWQSdg-----~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k 91 (287)
.+.|++.++ .+| ..+..|.|++.+|||.|.. ..||||.|.|. +
T Consensus 7 ~~~w~v~~~s~~~~~~~~~~~g~~~~a~DG~~~T~W~s~~~~~~~~~p~~i~vDLg-----------------------~ 63 (159)
T 3f2z_A 7 KTDWKIVSFTTEEASGEGSNNGHAKHLIDGNIETFWHSRWQGGSDPLPYEIIIDMN-----------------------H 63 (159)
T ss_dssp CTTCEEEEESCCCSSTTCTTSBSGGGGSSSCTTCCEECCCTTCCCCSCEEEEEEEE-----------------------E
T ss_pred ccCCEEEEecccccCCCCCCCCcHHhcCCCCCCCeEEcCCcCCCCCCCEEEEEECC-----------------------C
Confidence 356777643 222 3588999999999999986 45899999999 9
Q ss_pred eeeEEEEEEEeecCCCCCcCcceEEEeecCCcCCceeeeEEEccCCCceEEEEeccCCCCceeEEEEEEEEEeeeecCcc
Q psy5867 92 KTTVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRD 171 (287)
Q Consensus 92 ~~~i~~i~i~~~~~~DeSYtPs~I~i~~G~~~~dL~e~~~v~~~~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qfGrd 171 (287)
...|..|.+.-... ...+.|....|.+.+.-.+..++....+....++..+.+ .+..+.+|+|.+..+...+.-
T Consensus 64 ~~~i~~v~~~~~~~-~~~~~~~~~~I~~S~Dg~~W~~v~~~~~~~~~~~~~~~~-----~~~~aRYVRi~~~~~~~~~~~ 137 (159)
T 3f2z_A 64 RVKIAQIELLPRGR-GSNNPIKVVRFEASEDGTNWESIGQFGFTNQDAALKYYV-----KSSTARYIKLVIPDGVGNGTV 137 (159)
T ss_dssp EEEEEEEEEEECCT-TCCCCCCEEEEEEESSSSSCEEEEEEECCCCSSCEEECC-----CCEEEEEEEEEECSSSSCCSC
T ss_pred ceEEEEEEEEecCC-CCCCCeeEEEEEEEcCCCCeEEeEEeecCCCCccEEEec-----CCceEEEEEEEEEeccCCCce
Confidence 99999998865432 346789999999988888888888887765556666544 478899999988887765567
Q ss_pred ceeEEEEEecCCCC
Q psy5867 172 THMRQIKVYSPVQQ 185 (287)
Q Consensus 172 thIrqIkIy~~~~~ 185 (287)
..|..|.+|+....
T Consensus 138 ~si~Ei~vy~~~~~ 151 (159)
T 3f2z_A 138 AAIRELDVRGTVVN 151 (159)
T ss_dssp CEEEEEEEEEEECC
T ss_pred EEEEEEEEEcCCCC
Confidence 89999999987644
No 8
>4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A*
Probab=98.89 E-value=5.5e-08 Score=81.74 Aligned_cols=126 Identities=9% Similarity=0.168 Sum_probs=96.1
Q ss_pred CcceEEE--eccCCC----CCccccccCCCCceeccCC----CCCcEEEEEEcccccccchhhhcccCceeeeeeeeeee
Q psy5867 25 SQAIWSL--SSCKPG----FGVDQLRDDCMDTYWQSDG----QLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTT 94 (287)
Q Consensus 25 ~~a~W~v--SS~K~g----~gv~~L~d~~~~tyWQSdg----~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 94 (287)
+.+.|++ ||..+| .+++.|.|++++|||+|+. ..||||.|.|. +...
T Consensus 26 ~~~~wtvtAsS~~~~~~~~~~~~~a~DG~~~T~W~s~~~~~~~~p~~i~iDLg-----------------------~~~~ 82 (161)
T 4a41_A 26 PQGNMKATATSEHPDVGNEGLAKFAIDGKENTIWHTKYNPVEELPQSITLELG-----------------------GSYE 82 (161)
T ss_dssp CGGGCEEEESCCCCCSSSCCCGGGGGSSCTTCCEECCTTTTCCSCEEEEEEEE-----------------------EEEE
T ss_pred CccCCEEEEeccCCCCCCCCcHHHcCcCCCCCeEEeCCCCCCCCCEEEEEEcC-----------------------CCEE
Confidence 3566766 788877 6799999999999999973 46899999999 9999
Q ss_pred EEEEEEEeecCCCCCcCcceEEEeecCCcCCceeeeEEEccCCCceEEEEeccCCCCceeEEEEEEEEEeeeecCcccee
Q psy5867 95 VQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHM 174 (287)
Q Consensus 95 i~~i~i~~~~~~DeSYtPs~I~i~~G~~~~dL~e~~~v~~~~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qfGrdthI 174 (287)
|..|.+.-... .....|....|.+.+.-.+..++...++....++..+.|. +..+.+|+|.+..... .-..|
T Consensus 83 I~~v~~~~r~~-~~~~~~~~y~I~~S~DG~~W~~v~~g~~~~~~~~~~~~f~-----~v~aRYVRi~~~~~~~--~~~si 154 (161)
T 4a41_A 83 INKFTYLPRSG-AKNGNITKYELHVSEDGNNFRKISEGNWDDSGSLKTLKFN-----STKATHVKLVALEGVG--GFASA 154 (161)
T ss_dssp EEEEEEECCSS-CCTTCEEEEEEEEESSSSCEEEEEEEECCSSSSCEEEEEE-----EEEEEEEEEEEEEEGG--GCCEE
T ss_pred EeEEEEEecCC-CCCCcEEEEEEEEECCCCceEEeeeeeecCCCcEEEEEeC-----CceEEEEEEEEEEccC--CeEEe
Confidence 99998654322 2457899999999887778888877777655667777773 5688899888877642 24667
Q ss_pred EEEEEec
Q psy5867 175 RQIKVYS 181 (287)
Q Consensus 175 rqIkIy~ 181 (287)
..|.+|+
T Consensus 155 ~E~~Vya 161 (161)
T 4a41_A 155 AELNVFA 161 (161)
T ss_dssp SEEEEEC
T ss_pred EeEEEEC
Confidence 7777764
No 9
>3ggl_A Putative chitobiase; X-RAY, structure genomics, NESG, BTR324A, Q8A9F0_bactn, BT_0865, PSI-2, protein structure initiative; 3.00A {Bacteroides thetaiotaomicron}
Probab=98.76 E-value=3.5e-07 Score=76.98 Aligned_cols=131 Identities=13% Similarity=0.227 Sum_probs=101.3
Q ss_pred cceEEEec---cCCCC------CccccccCCCCceeccCC-----CCCcEEEEEEcccccccchhhhcccCceeeeeeee
Q psy5867 26 QAIWSLSS---CKPGF------GVDQLRDDCMDTYWQSDG-----QLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRR 91 (287)
Q Consensus 26 ~a~W~vSS---~K~g~------gv~~L~d~~~~tyWQSdg-----~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k 91 (287)
.+.|++.+ ..+|. .+..|.|++++|||.|.. ..||||.|.|. +
T Consensus 17 ~~~w~v~~~s~~~~~~~~~~~g~~~~a~DG~~~T~W~s~~~~~~~~~p~wi~vDLg-----------------------~ 73 (169)
T 3ggl_A 17 KSGWEVLSFTTQEASGEGAGNGLAKCLIDGDTETFWHAKWQGGSDPLPYDIVIDMK-----------------------Q 73 (169)
T ss_dssp CSSCEEEEESCCCSSSSCSSCBSGGGGGSSCSSCCEECCCSSCCCCSCEEEEEEEE-----------------------E
T ss_pred hhcCEEEEecccccCCCccCCCcHHhcCCCCCCCceEccCcCCCCCCCEEEEEECC-----------------------C
Confidence 45677653 33343 388999999999999974 35899999999 9
Q ss_pred eeeEEEEEEEeecCCCCCcCcceEEEeecCCcCCceeeeEEEccCCCceEEEEeccCCCCceeEEEEEEEEEeeeecCcc
Q psy5867 92 KTTVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRD 171 (287)
Q Consensus 92 ~~~i~~i~i~~~~~~DeSYtPs~I~i~~G~~~~dL~e~~~v~~~~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qfGrd 171 (287)
...|..|.+.-... ...+.|....|.+.+.-.+..++...++....++..+.+ .+..+.+|+|.+......+.-
T Consensus 74 ~~~i~~v~~~~r~~-~~~~~~~~y~I~~S~Dg~~W~~v~~~~~~~~~~~~~~~f-----~~~~aRYVRi~~~~~~~~~~~ 147 (169)
T 3ggl_A 74 NIQIAQVELLPRGR-GSNNPIKVVEFAASEDNVNWTPIGRFGFTNQDAALEYYV-----KSIKARYIRLTIPDDGGNSTV 147 (169)
T ss_dssp EEEEEEEEEEECCT-TCCCCCCEEEEEEESSSSCCEEEEEEECCCCSSCEEECC-----CCEEEEEEEEEECSSSSCCSC
T ss_pred cEEEeEEEEEecCC-CCCCCeeEEEEEEeCCCCCcEEeEEEEeccCCCcEEEEe-----cCceEEEEEEEEEeCCCCCce
Confidence 99999998755432 346889999999988888888988888765556666544 478899999988887665567
Q ss_pred ceeEEEEEecCCCC
Q psy5867 172 THMRQIKVYSPVQQ 185 (287)
Q Consensus 172 thIrqIkIy~~~~~ 185 (287)
..|..|.+|+....
T Consensus 148 ~si~Ei~vy~~~~~ 161 (169)
T 3ggl_A 148 AAIRELDVKGTIIN 161 (169)
T ss_dssp CEEEEEEEEEEECC
T ss_pred EEEEEEEEEcCCCC
Confidence 89999999987643
No 10
>2j1a_A Hyaluronidase, CBM32; protein-carbohydrate interaction, glycoside hydrolase, GH84C, hydrolase; HET: GAL; 1.49A {Clostridium perfringens} PDB: 2j1e_A* 2j7m_A*
Probab=98.74 E-value=4.8e-07 Score=72.45 Aligned_cols=123 Identities=13% Similarity=0.196 Sum_probs=92.5
Q ss_pred EEeccCCC---CCccccccCCCCceeccCCC-----CCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEEEE
Q psy5867 30 SLSSCKPG---FGVDQLRDDCMDTYWQSDGQ-----LPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICIY 101 (287)
Q Consensus 30 ~vSS~K~g---~gv~~L~d~~~~tyWQSdg~-----~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~i~ 101 (287)
+.||..++ ++...|.|++.+|||.|... .||||.|.|. +...|..|.++
T Consensus 15 tass~~~~~~~~~~~~~~DG~~~t~w~s~~~~~~~~~~~~l~iDLg-----------------------~~~~i~~v~~~ 71 (150)
T 2j1a_A 15 TASSEETSGENAPASFASDGDMNTFWHSKWSSPAHEGPHHLTLELD-----------------------NVYEINKVKYA 71 (150)
T ss_dssp EESCCBCSSSCBCGGGGSSSCTTCCEECCCSSSCCCSCCEEEEEEE-----------------------EEEEEEEEEEE
T ss_pred EEecccCCCCCCcHHhcCcCCCCCcEEccccCCCCCCCeEEEEECC-----------------------CCeEEeEEEEe
Confidence 44566655 78999999999999998643 4799999999 99999999986
Q ss_pred eecCCCCCcCcceEEEeecCCcCCceeeeEEEccCCCceEEEEeccCCCCceeEEEEEEEEEeee----e-cCccceeEE
Q psy5867 102 TDYKLDESYTPSRVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNH----Q-NGRDTHMRQ 176 (287)
Q Consensus 102 ~~~~~DeSYtPs~I~i~~G~~~~dL~e~~~v~~~~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~----q-fGrdthIrq 176 (287)
-... .....|....|.+.....+..++...+++...++..+.+. +..+.+|+|.+.... . .+.-..|..
T Consensus 72 ~~~~-~~~~~~~~~~i~~S~Dg~~w~~v~~~~~~~~~~~~~~~~~-----~~~aryvRi~~~~~~~~~~~~~~~~~~i~E 145 (150)
T 2j1a_A 72 PRQD-SKNGRITGYKVSVSLDGENFTEVKTGTLEDNAAIKFIEFD-----SVDAKYVRLDVTDSVSDQANGRGKFATAAE 145 (150)
T ss_dssp CCSS-CCTTEEEEEEEEEESSSSSEEEEEEEECCSSSSCEEEEEE-----EEEEEEEEEEEEEEECCC--CTTTCCEESE
T ss_pred ecCC-CCCCCEEEEEEEEEcCCCceEEEEEeeECCCCceEEEEEC-----CeEEEEEEEEEEecccccccCCCceEEEEE
Confidence 5422 1356788999998877777778777777666667777763 578889998888765 2 233477888
Q ss_pred EEEec
Q psy5867 177 IKVYS 181 (287)
Q Consensus 177 IkIy~ 181 (287)
|.+|+
T Consensus 146 i~v~G 150 (150)
T 2j1a_A 146 VNVHG 150 (150)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 88875
No 11
>2jda_A Yecbm32; hypothetical protein, carbohydrate- binding module, sugar-binding protein, pectin, plant cell WALL, galacturonic acid; 1.35A {Yersinia enterocolitica} PDB: 2jd9_A
Probab=98.37 E-value=2.6e-05 Score=62.46 Aligned_cols=124 Identities=13% Similarity=0.199 Sum_probs=91.5
Q ss_pred ceEEEeccC--CCCCccccccCCCCceeccCCCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEEEEeec
Q psy5867 27 AIWSLSSCK--PGFGVDQLRDDCMDTYWQSDGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICIYTDY 104 (287)
Q Consensus 27 a~W~vSS~K--~g~gv~~L~d~~~~tyWQSdg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~i~~~~ 104 (287)
+.-+.||.- +|++...++|++.+|+|.+.+. +||.|.|. +...|..|.+...
T Consensus 11 ~~vtASs~~~~~~~~~~~a~Dg~~~t~W~~~~~--~~l~vDLg-----------------------~~~~v~~v~i~~~- 64 (145)
T 2jda_A 11 VAVTASGYDSEKGHVPANIADGDVKTRWAASGE--SWVQLELD-----------------------KEQSIENILIVPF- 64 (145)
T ss_dssp EEEEESCCBTTTTBCGGGGGSSCTTCCEEEESS--EEEEEEEE-----------------------EEEEEEEEEEEES-
T ss_pred EEEEEeecccCCCCCchhcccCCCCCeECCCCC--eeEEEECC-----------------------CceEEEEEEEEec-
Confidence 345667774 7899999999999999999986 99999999 9999999998765
Q ss_pred CCCCCcCcceEEEeecCCcCCceeeeEEEc-c-CCCceEEEEeccCCCCceeEEEEEEEEEeeeecCccceeEEEEEecC
Q psy5867 105 KLDESYTPSRVSVRAGTNFNDLQEIEVVDL-N-EPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSP 182 (287)
Q Consensus 105 ~~DeSYtPs~I~i~~G~~~~dL~e~~~v~~-~-~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qfGrdthIrqIkIy~~ 182 (287)
+....|....|.+...-.+...+..... . ...+...+.+ .+..+.+|+|.+..+.. +.-..|..|.+|+.
T Consensus 65 --~~~~~~~~~~i~~S~Dg~~w~~~~~~~~~~~~~~~~~~~~f-----~~~~aryvRi~~~~~~~-~~~~~i~Ei~v~g~ 136 (145)
T 2jda_A 65 --KPTERKLKFSIFYSNDGKNWQPLAEGLETSSADKNGEKLTF-----TPVTAKYIKLDTFGTDV-NNWSAINEIAINSA 136 (145)
T ss_dssp --STTTCCEEEEEEEESSSSSCEEEEEEEECCCSCSSCEEEEE-----EEEEEEEEEEEEEEESS-SSEEEEEEEEESCC
T ss_pred --cCCCceEEEEEEEeCCCCceEEeeeCccccCCCCccEEEEe-----CcccEEEEEEEEECCCC-CcEeEEEEEEEECC
Confidence 2234688888888666566677665432 1 2235566665 25678899888877543 33578899999987
Q ss_pred CC
Q psy5867 183 VQ 184 (287)
Q Consensus 183 ~~ 184 (287)
..
T Consensus 137 ~~ 138 (145)
T 2jda_A 137 AA 138 (145)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 12
>2v72_A CBM32, EXO-alpha-sialidase; galactose, bacterial pathogen, carbohydrate-binding module, sugar-binding protein; HET: GAL; 2.25A {Clostridium perfringens}
Probab=98.27 E-value=2.2e-05 Score=62.44 Aligned_cols=124 Identities=16% Similarity=0.178 Sum_probs=86.0
Q ss_pred cceEEEecc--CCCCCccccccCCCCceeccCCC----CCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEE
Q psy5867 26 QAIWSLSSC--KPGFGVDQLRDDCMDTYWQSDGQ----LPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDIC 99 (287)
Q Consensus 26 ~a~W~vSS~--K~g~gv~~L~d~~~~tyWQSdg~----~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~ 99 (287)
...|++||. ..+.+...++|++.+|||.+.-. .||||.|.|. +...|..|.
T Consensus 13 ~~~~tasss~~~~~~~~~~~~Dg~~~t~w~~~w~~~~~~~~~l~vDLg-----------------------~~~~i~~v~ 69 (143)
T 2v72_A 13 QSEMTASATSEEGQDPASSAIDGNINTMWHTKWNGSDALPQSLSVNLG-----------------------KARKVSSIA 69 (143)
T ss_dssp GGGCEEEESSCBTTBCGGGGSSSCTTCCEECCTTSCSCSCEEEEEEEE-----------------------EEEEEEEEE
T ss_pred hhhcEEEEecccCCChHHhccCCCCCCceecCCCCCCCCCEEEEEECC-----------------------CCeEEeEEE
Confidence 356777654 35677899999999999987643 4799999999 888899988
Q ss_pred EEeecCCCCCcCcceEEEeecCCcCCceeeeEEEccCCCceEEEEeccCCCCceeEEEEEEEEEeeeecCccceeEEEEE
Q psy5867 100 IYTDYKLDESYTPSRVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKV 179 (287)
Q Consensus 100 i~~~~~~DeSYtPs~I~i~~G~~~~dL~e~~~v~~~~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qfGrdthIrqIkI 179 (287)
+.-.... ....|....|.+...-.+ ..+..-+.+...+.+.+.|. .+..+.+|+|.+..... .-..|..|.+
T Consensus 70 ~~~~~~~-~~~~~~~~~i~~S~Dg~~-~~v~~g~~~~~~~~~~~~f~----~p~~aRyvRi~~~~~~~--~~~~i~Ei~v 141 (143)
T 2v72_A 70 ITPRTSG-NNGFITKYEIHAINNGVE-TLVAEGTWEENNLVKTVTFD----SPIDAEEIKITAIQGVG--GFASIAELNV 141 (143)
T ss_dssp EECCSSC-CTTCEEEEEEEEEETTEE-EEEEEEECCSSSSCEEEEEE----EEEEEEEEEEEEEEEGG--GCCEESEEEE
T ss_pred EEecccC-CCCCEEEEEEEEEcCCCc-cEEeEEEEcCCCceEEEEeC----CCCcEEEEEEEEEEcCC--CeEEEEEEEE
Confidence 8754321 244578888887765444 55544455543456666663 35788899988887653 3366666666
Q ss_pred e
Q psy5867 180 Y 180 (287)
Q Consensus 180 y 180 (287)
|
T Consensus 142 ~ 142 (143)
T 2v72_A 142 Y 142 (143)
T ss_dssp E
T ss_pred E
Confidence 5
No 13
>3hnm_A Putative chitobiase; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, BTR319D.BT_411; 3.00A {Bacteroides thetaiotaomicron}
Probab=98.20 E-value=3e-05 Score=66.71 Aligned_cols=115 Identities=15% Similarity=0.162 Sum_probs=72.7
Q ss_pred CCccccccCCCCceecc--C--CCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEEEEeecCCCC----C
Q psy5867 38 FGVDQLRDDCMDTYWQS--D--GQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICIYTDYKLDE----S 109 (287)
Q Consensus 38 ~gv~~L~d~~~~tyWQS--d--g~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~i~~~~~~De----S 109 (287)
+.+++|.|++++|||+| . ++.||+|.|.|. +...|..+.++---. +. .
T Consensus 39 ~~~~~liDgn~~T~Wht~w~~~~~~P~~itIDLg-----------------------~~~~v~~~~~~~r~~-~~~~~~~ 94 (172)
T 3hnm_A 39 WGVESLIDNNPGTQWLCRWDVKEPLPYYFVFDMG-----------------------KEYTLFRFGFANPVA-PAAHVWA 94 (172)
T ss_dssp CSGGGGSSSCTTSCEECCCSSCCCSCEEEEEEEE-----------------------EEEEEEEEEEECCCS-SCTTSTT
T ss_pred ccHHHcCCCCCCCeEEecCCCCCCCCEEEEEECC-----------------------CceEEeEEEEEecCC-CCcccCC
Confidence 35899999999999999 4 456899999999 888888887654421 11 3
Q ss_pred cCcceEEEeecCCcCCceeeeEEEccCCCceEEEEeccCCCCceeEEEEEEEEEeeeecCccceeEEEEEe
Q psy5867 110 YTPSRVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVY 180 (287)
Q Consensus 110 YtPs~I~i~~G~~~~dL~e~~~v~~~~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qfGrdthIrqIkIy 180 (287)
-+|....|.+.+.-.+...+.+.++... |...+.+. ..+.++.+|.+.+......=.+.||.--.||
T Consensus 95 g~ik~~~I~~S~Dg~~W~~v~~~~~~~~-~~~~~~~~---~~~~~aRYIR~~v~~g~~~~~~~rv~~~e~~ 161 (172)
T 3hnm_A 95 GTSKAGYVEASIDNENWVKLKDWTSPKI-GEPNVNMD---VPATQARYIRFVITDTYPTYDGLRVSLGEVY 161 (172)
T ss_dssp CCEEEEEEEEESSSSCEEEEECCBCSST-TCSCEEEE---EEEEEEEEEEEEEEEECCCTTSSCCEECEEE
T ss_pred CCeEEEEEEEEeCCCCeEEeEEEEecCC-CCceEEee---cCCCceEEEEEEEccCcccccceEEEhhHhh
Confidence 4799999999777666666655544443 11111110 1245566777766665432233444333333
No 14
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=98.01 E-value=0.00015 Score=71.20 Aligned_cols=127 Identities=10% Similarity=0.140 Sum_probs=92.8
Q ss_pred ceEEE---eccCC---CCCccccccCCCCceeccCCC------CCcEEEEEEcccccccchhhhcccCceeeeeeeeeee
Q psy5867 27 AIWSL---SSCKP---GFGVDQLRDDCMDTYWQSDGQ------LPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTT 94 (287)
Q Consensus 27 a~W~v---SS~K~---g~gv~~L~d~~~~tyWQSdg~------~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 94 (287)
..|++ ||... ++....|.|++.+|||.|... .||||.|.|. +...
T Consensus 461 ~~~~~~~~ss~~~~~~~~~~~~a~DG~~~T~w~s~~~~~~~~~~~~~i~vDLg-----------------------~~~~ 517 (601)
T 1w8o_A 461 ARMSIADVDSEETAREDGRASNVIDGNPSTFWHTEWSRADAPGYPHRISLDLG-----------------------GTHT 517 (601)
T ss_dssp GGCEEEEESCCCCSSSCCCGGGGGSSCTTCCEECCCSSTTCCCSCEEEEEEEE-----------------------EEEE
T ss_pred ccCeeeecccccccccCCccceeeCCCCCCcEecCCCCCCCCCCCeEEEEECC-----------------------CcEE
Confidence 45655 55543 677999999999999998754 3899999999 9999
Q ss_pred EEEEEEEeecCCCCCcCcceEEEeecCCcCCcee-eeEEEccCCCceEEEEeccCCCCceeEEEEEEEEEeeeecCccce
Q psy5867 95 VQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQE-IEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTH 173 (287)
Q Consensus 95 i~~i~i~~~~~~DeSYtPs~I~i~~G~~~~dL~e-~~~v~~~~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qfGrdth 173 (287)
|..|.+.-... .....|....|.+.+.-.+..+ +..-.+....++..+.+. +..+.+|.|.+........-..
T Consensus 518 i~~v~~~~r~~-~~~~~~~~y~i~~S~Dg~~w~~~v~~~~~~~~~~~~~~~f~-----~~~aRyvRi~~~~~~~~~~~~~ 591 (601)
T 1w8o_A 518 ISGLQYTRRQN-SANEQVADYEIYTSLNGTTWDGPVASGRFTTSLAPQRAVFP-----ARDARYIRLVALSEQTGHKYAA 591 (601)
T ss_dssp EEEEEEEECSS-CSTTCBCEEEEEEESSSSSCEEEEEEEECCSCSSCEEEEEE-----EEEEEEEEEEECCBTTSCSCCE
T ss_pred EeEEEEecCCC-CCCCceEEEEEEEECCCCccceeeeeEEEcCCCceEEEEeC-----CcceEEEEEEEEEcCCCCceEE
Confidence 99998853321 2356889999999888777776 665555444456666662 5678888888877654334578
Q ss_pred eEEEEEecC
Q psy5867 174 MRQIKVYSP 182 (287)
Q Consensus 174 IrqIkIy~~ 182 (287)
|..|.+|+.
T Consensus 592 i~Ei~v~g~ 600 (601)
T 1w8o_A 592 VAELEVEGQ 600 (601)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 888888874
No 15
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.87 E-value=0.00017 Score=71.55 Aligned_cols=129 Identities=12% Similarity=0.191 Sum_probs=95.9
Q ss_pred ceEEEe--ccCCCCCccccccCCCCceeccCCC------CCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEE
Q psy5867 27 AIWSLS--SCKPGFGVDQLRDDCMDTYWQSDGQ------LPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDI 98 (287)
Q Consensus 27 a~W~vS--S~K~g~gv~~L~d~~~~tyWQSdg~------~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i 98 (287)
..|+++ |...++...++.|++.+|||.|... .||||.|.|. +...|..|
T Consensus 29 ~~~~~~ass~~~~~~~~~~~Dg~~~T~W~s~~~~~~~~~~~~~l~vDLg-----------------------~~~~i~~v 85 (656)
T 1k3i_A 29 NNWAVTCDSAQSGNECNKAIDGNKDTFWHTFYGANGDPKPPHTYTIDMK-----------------------TTQNVNGL 85 (656)
T ss_dssp TTCEEEESCCCTTSCGGGGSSSCTTCCEECCCGGGCCCCSCEEEEEEEE-----------------------EEEEEEEE
T ss_pred cCeEEEEeccCCCCcHHhcCCCCCCCEEEeCCCCCCCCCCCceEEecCC-----------------------CcEEEEEE
Confidence 446554 5556788999999999999999876 5899999999 99999999
Q ss_pred EEEeecCCCCCcCcceEEEeecCCcCCc-eeeeEEEccCCCceEEEEeccCCCCceeEEEEEEEEEeeeecCccceeEEE
Q psy5867 99 CIYTDYKLDESYTPSRVSVRAGTNFNDL-QEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQI 177 (287)
Q Consensus 99 ~i~~~~~~DeSYtPs~I~i~~G~~~~dL-~e~~~v~~~~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qfGrdthIrqI 177 (287)
.+.-.........|...+|.+.+.-.+. ..+..-++....+...+.+. +.++.+|+|.+........-..|..+
T Consensus 86 ~~~~~~~~~~~~~~~~y~i~~S~Dg~~w~~~v~~~~~~~~~~~~~~~~~-----~~~aRyvRi~~~~~~~~~~~~si~E~ 160 (656)
T 1k3i_A 86 SMLPRQDGNQNGWIGRHEVYLSSDGTNWGSPVASGSWFADSTTKYSNFE-----TRPARYVRLVAITEANGQPWTSIAEI 160 (656)
T ss_dssp EEECCCSSCCTTCBCEEEEEEESSSSCCCSCSEEEECCSSSSCEEEEEE-----EEEEEEEEEEECSBTTSCSCCEESEE
T ss_pred EEEecccCCCCCCeeEEEEEEECCCCCcceeeeeeeecCCCcceeeecC-----CcceEEEEEEEecccccCCceeEEEE
Confidence 8875432223446888999987766666 56666666665566666662 57888999888877554345788888
Q ss_pred EEecCC
Q psy5867 178 KVYSPV 183 (287)
Q Consensus 178 kIy~~~ 183 (287)
.+|+..
T Consensus 161 ~v~~~~ 166 (656)
T 1k3i_A 161 NVFQAS 166 (656)
T ss_dssp EEEECS
T ss_pred EEeecc
Confidence 888765
No 16
>4a3z_A GH89_CBM32, alpha-N-acetylglucosaminidase family protein; hydrolase, family 32 carbohydrate-binding module; HET: MSE; 1.55A {Clostridium perfringens} PDB: 4a6o_A*
Probab=97.85 E-value=0.00022 Score=60.52 Aligned_cols=81 Identities=12% Similarity=0.171 Sum_probs=60.1
Q ss_pred eeecCcceEEEeccCCCCCccccccCCCCceeccCCC-CCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEE
Q psy5867 21 REVGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQSDGQ-LPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDIC 99 (287)
Q Consensus 21 ~~i~~~a~W~vSS~K~g~gv~~L~d~~~~tyWQSdg~-~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~ 99 (287)
.++..-+.-+.||...|+...++.|+|++|+|.|++. .|+||.|.|. +...|..|.
T Consensus 27 ~NLA~~k~ataSs~~~~~~a~~AvDGn~~T~W~s~~~~~~~Wi~VDLg-----------------------~~~~v~~v~ 83 (161)
T 4a3z_A 27 VNIAENKNVSGSNSQSGNPLSNITDGDLSSLWISDNGAMPANATIDLE-----------------------GNNFVDFLE 83 (161)
T ss_dssp CBTTTTCCEEESCBCTTCCGGGGSSSCTTCCEEBGGGCSSEEEEEEEE-----------------------EEEEEEEEE
T ss_pred ccccCCCceEEeCCcCCCChhhcCcCCCCCeEEcCCCCCCeEEEEECC-----------------------CcEEEeEEE
Confidence 4455556667899888899999999999999999987 5899999999 889999998
Q ss_pred EEeecCCCCCcCcceEEEeecCCcCCcee
Q psy5867 100 IYTDYKLDESYTPSRVSVRAGTNFNDLQE 128 (287)
Q Consensus 100 i~~~~~~DeSYtPs~I~i~~G~~~~dL~e 128 (287)
|+.. .+ +.+....|.+.+.-.+...
T Consensus 84 i~~~--~~--~~~~~y~IevS~Dg~~W~~ 108 (161)
T 4a3z_A 84 LHFE--KE--GFRFQFKVEVEDESGNRET 108 (161)
T ss_dssp EECS--ST--TCCEEEEEEEECTTCCEEE
T ss_pred EEEC--CC--CceEEEEEEEEcCCCCEEE
Confidence 8643 22 3334555555544433333
No 17
>4a42_A GH89_CBM32-4, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: MSE; 1.55A {Clostridium perfringens}
Probab=97.80 E-value=0.00024 Score=58.94 Aligned_cols=116 Identities=14% Similarity=0.210 Sum_probs=75.3
Q ss_pred CcceEEEeccCCCCCccccccCCCCceeccCCC-CCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEEEEee
Q psy5867 25 SQAIWSLSSCKPGFGVDQLRDDCMDTYWQSDGQ-LPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICIYTD 103 (287)
Q Consensus 25 ~~a~W~vSS~K~g~gv~~L~d~~~~tyWQSdg~-~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~i~~~ 103 (287)
+.|.++.+|. ......+.|+|.+|||.+... .||| .|.|. +...|..|.+...
T Consensus 30 ~~a~~s~~~~--~g~a~~aiDGn~~T~W~s~~~~~p~~-~VDLg-----------------------~~~~V~~v~i~~~ 83 (149)
T 4a42_A 30 DETKVEVTSN--NSEANNLRDGNENTLWVPGQEEEKSV-TFDLS-----------------------KEKDISAIDIVSK 83 (149)
T ss_dssp TTCEEEESSC--GGGGGGGGSSCTTSCBCCCSCSSEEE-EEEEE-----------------------EEEECCEEEEEEC
T ss_pred CCceEEEEcC--CCChHhcEeCCCCCEEEcCCCCCCeE-EEECC-----------------------CcEEEEEEEEEcC
Confidence 4566766654 346899999999999999875 4687 88888 8888888888433
Q ss_pred cCCCCCcCcceEEEeecCCcCCceeeeEE-EccCCCceEEEEeccCCCCceeEEEEEEEEEeeeecCccceeEEEEEe
Q psy5867 104 YKLDESYTPSRVSVRAGTNFNDLQEIEVV-DLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVY 180 (287)
Q Consensus 104 ~~~DeSYtPs~I~i~~G~~~~dL~e~~~v-~~~~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qfGrdthIrqIkIy 180 (287)
..| +....|.+++.-.+..++... +.........+.| +.+..+.+|.|.+... -..|..+.+|
T Consensus 84 -r~~----v~~y~I~~S~DG~~W~~~~~~g~~~~~~~~~~~~f----~~pv~aRYVRi~~~~~-----~~si~E~~Vy 147 (149)
T 4a42_A 84 -GNS----PLKYSIEISNDGTEWTKIVDENNNEENKAVYSNIL----KSGKIGRFVRFNFNSE-----NVKIGEIKIY 147 (149)
T ss_dssp -SSS----CCCEEEEEESSSSSCEEEEEETTCCCCCSEEEEEC----CTTCEEEEEEEEECSS-----SCCEEEEEEE
T ss_pred -CCC----cEEEEEEEEcCCCeEeEeEEcceeCCCCceEEEEc----CCCceEEEEEEEEecC-----CcEEEEEEEE
Confidence 223 777777777666566553221 1212223444444 3466777777766544 4456666665
No 18
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=97.47 E-value=0.0021 Score=66.31 Aligned_cols=122 Identities=14% Similarity=0.231 Sum_probs=85.3
Q ss_pred EEeccCC---CCCccccccCCCCceeccC-----CCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEEEE
Q psy5867 30 SLSSCKP---GFGVDQLRDDCMDTYWQSD-----GQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICIY 101 (287)
Q Consensus 30 ~vSS~K~---g~gv~~L~d~~~~tyWQSd-----g~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~i~ 101 (287)
+.||... ++....+.|+|.+|||.|. +..||||.|.|. +...|..|.+.
T Consensus 602 tAsS~~~~~~~~~a~~aiDGn~~T~W~S~w~~~~~~~p~wl~VDLg-----------------------~~~~V~~V~i~ 658 (737)
T 2v5d_A 602 TASSEETSGENAPASFASDGDMNTFWHSKWSSPAHEGPHHLTLELD-----------------------NVYEINKVKYA 658 (737)
T ss_dssp EESCCBCSSSSBCGGGGGSSCSSCCEECCCSSSCCCCCCEEEEEEE-----------------------EEEEEEEEEEE
T ss_pred EeeccccCCCCCCHHHccCCCCCCceeccccCCCCCCCeEEEEECC-----------------------CcEEEEEEEEE
Confidence 4556553 5678999999999999985 335899999999 88888888866
Q ss_pred eecCCC-CCcCcceEEEeecCCcCCceeeeEEEccCCCceEEEEeccCCCCceeEEEEEEEEEeeeec---C--ccceeE
Q psy5867 102 TDYKLD-ESYTPSRVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQN---G--RDTHMR 175 (287)
Q Consensus 102 ~~~~~D-eSYtPs~I~i~~G~~~~dL~e~~~v~~~~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qf---G--rdthIr 175 (287)
- ..+ ....+....|.+.+...+..++....+....+...+.+. +..+.+|.|.+...... | .-..|.
T Consensus 659 ~--r~~~~~g~v~~y~I~~S~DG~~W~~v~~gt~~~~~~~~~v~f~-----~v~ARYVRi~~~~~~~~~~~G~~~~~sia 731 (737)
T 2v5d_A 659 P--RQDSKNGRITGYKVSVSLDGENFTEVKTGTLEDNAAIKFIEFD-----SVDAKYVRLDVTDSVSDQANGRGKFATAA 731 (737)
T ss_dssp C--CSSCCTTEEEEEEEEEESSSSCCCCSEEEECCSSSSCEEEEEE-----EEEEEEEEEEEEEEECSSSSCTTTCCEES
T ss_pred e--ccCCCCCceEEEEEEEEcCCCceEEEEeeeecCCCceEEEEeC-----CceEEEEEEEEEeeccccccCCCCcEEEE
Confidence 2 223 123456667777666666667766665544456666662 56788999888887642 2 447777
Q ss_pred EEEEec
Q psy5867 176 QIKVYS 181 (287)
Q Consensus 176 qIkIy~ 181 (287)
.+.+|+
T Consensus 732 E~~VyG 737 (737)
T 2v5d_A 732 EVNVHG 737 (737)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 788775
No 19
>4gwi_A Lectinolysin, platelet aggregation factor SM-HPAF; cholesterol-dependent cytolysins, lewis antigens, F-type LEC glycan binding; HET: BDZ; 1.60A {Streptococcus mitis} PDB: 4gwj_A* 3lei_A* 3leg_A* 3le0_A* 3lek_A*
Probab=97.38 E-value=0.0063 Score=50.92 Aligned_cols=124 Identities=12% Similarity=0.118 Sum_probs=78.9
Q ss_pred cceEEEeccCCCCCccccccCCCCceecc------CCCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEE
Q psy5867 26 QAIWSLSSCKPGFGVDQLRDDCMDTYWQS------DGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDIC 99 (287)
Q Consensus 26 ~a~W~vSS~K~g~gv~~L~d~~~~tyWQS------dg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~ 99 (287)
...=+-||...++....+.|++.+|+|.+ .+.-|+|+.+.+. +...|.+|.
T Consensus 15 ~k~ataSS~~~~~~a~~AvDG~~~t~w~~~sct~t~~~~~~W~~VDLg-----------------------~~~~v~~V~ 71 (153)
T 4gwi_A 15 GKQASQSSTAHGGAATRAVDGNVDSDYGHHSVTHTNFEDNAWWQVDLG-----------------------KTENVGKVK 71 (153)
T ss_dssp TCEEEESCCCTTCCGGGGGSSCCCCCGGGTCCCCCCSBTTCEEEEEEE-----------------------EEEEEEEEE
T ss_pred CCceEEcCCCCCCCcceeEcCCCCCcccccccccCCCCCCCEEEEECC-----------------------CCEEEEEEE
Confidence 34456788888889999999999999994 5556899999999 999999999
Q ss_pred EEeecCCCC--CcCcceEEEeecCCcCCceeeeEEEccCC-C-ceEEEEeccCCCCceeEEEEEEEEEeeeecCccceeE
Q psy5867 100 IYTDYKLDE--SYTPSRVSVRAGTNFNDLQEIEVVDLNEP-S-GWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMR 175 (287)
Q Consensus 100 i~~~~~~De--SYtPs~I~i~~G~~~~dL~e~~~v~~~~p-~-Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qfGrdthIr 175 (287)
|+-- .|- +---....|+.|++. -...+.+.+..+ . +-..+.+. ++...||.|.+... +.-..|.
T Consensus 72 i~nr--~d~~~~~r~~~~~I~v~s~d--g~~w~~~~~~~~~~~~~~~i~~~-----~~~gRYVrv~~~~~---~~~lsL~ 139 (153)
T 4gwi_A 72 LYNR--GDGNVANRLSNFDVVLLNEA--KQEVARQHFDSLNGKAELEVFFT-----AKDARYVKVELKTK---NTPLSLA 139 (153)
T ss_dssp EEEC--CSTTCGGGSCSEEEEEECTT--SCEEEEEEESCCTTCSEEEEEEE-----EEEEEEEEEEECSS---SBCCCEE
T ss_pred EEcc--cCCchhhcccceEEEEECCC--CCeeeeeEEecCCCCCEEEEEeC-----CceEEEEEEEEEcC---CCceEEE
Confidence 9643 232 222345667777542 223333333332 2 23344442 45666776655432 2356667
Q ss_pred EEEEecCCC
Q psy5867 176 QIKVYSPVQ 184 (287)
Q Consensus 176 qIkIy~~~~ 184 (287)
.+.+|+...
T Consensus 140 EveVyg~~~ 148 (153)
T 4gwi_A 140 EVEVFRSAT 148 (153)
T ss_dssp EEEEEEBC-
T ss_pred EEEEECccc
Confidence 777776543
No 20
>3lei_A Platelet aggregation factor SM-HPAF; lectin domain of lectinolysin, fucose, blood clotting, nicke; HET: FUC; 1.90A {Streptococcus mitis} PDB: 3leg_A* 3le0_A* 3lek_A*
Probab=97.29 E-value=0.016 Score=47.75 Aligned_cols=126 Identities=11% Similarity=0.107 Sum_probs=76.5
Q ss_pred ecCcceEEEeccCCCCCccccccCCCCceecc------CCCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEE
Q psy5867 23 VGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQS------DGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQ 96 (287)
Q Consensus 23 i~~~a~W~vSS~K~g~gv~~L~d~~~~tyWQS------dg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~ 96 (287)
+.--+.=+-||...+++.....|++.+|||.+ ++..|+|+.+.+. +...|.
T Consensus 12 lA~~k~ataSS~~~~~~a~~AvDG~~~t~W~~~~ct~t~~~~~~W~~VDLg-----------------------~~~~v~ 68 (153)
T 3lei_A 12 IARGKQASQSSTAYGGAATRAVDGNVDSDYGHHSVTHTNFEDNAWWQVDLG-----------------------KTENVG 68 (153)
T ss_dssp TTTTCEEEESCCCTTCCGGGGGSSCCCCCGGGTCSCCCCSBTTCEEEEEEE-----------------------EEEEEE
T ss_pred cCCCCCeeECCCcCCCCccccccCCCCCccccCccccCCCCCCCeEEEECC-----------------------CceEEe
Confidence 33344557888888889999999999999995 5666899999999 999999
Q ss_pred EEEEEeecCCCC--CcCcceEEEeecCCcCCceeeeEEEccCC-Cc-eEEEEeccCCCCceeEEEEEEEEEeeeecCccc
Q psy5867 97 DICIYTDYKLDE--SYTPSRVSVRAGTNFNDLQEIEVVDLNEP-SG-WVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDT 172 (287)
Q Consensus 97 ~i~i~~~~~~De--SYtPs~I~i~~G~~~~dL~e~~~v~~~~p-~G-wv~i~~~~~~d~~l~~f~iQi~I~~n~qfGrdt 172 (287)
+|.| .+.. |. +---....|++|++.. ...+.+..... .+ -+.+.+ .+....||.|.+... ..-.
T Consensus 69 ~V~i-~~~~-d~~~~~r~~~~~I~vs~~dg--~~w~~~~~~~~~~~~~~~~~~-----~~~~~RYVri~~~~~---~~~~ 136 (153)
T 3lei_A 69 KVKL-YNRG-DGNVANRLSNFDVVLLNEAK--QEVARQHFDSLNGKAELEVFF-----TAKDARYVKVELKTK---NTPL 136 (153)
T ss_dssp EEEE-EECC-STTCGGGSCSEEEEEECTTC--CEEEEEEESCCTTCSEEEEEE-----EEEEEEEEEEEECST---TBCC
T ss_pred EEEE-EeCC-CCcccccceeEEEEEECCCC--CccccceeecCCCCCeEEEEe-----CCeEEEEEEEEeeCC---CCcE
Confidence 9999 5543 32 1111335566664321 12222222211 11 223333 235566666555322 2346
Q ss_pred eeEEEEEecCC
Q psy5867 173 HMRQIKVYSPV 183 (287)
Q Consensus 173 hIrqIkIy~~~ 183 (287)
.|..+.+|+..
T Consensus 137 sl~EveVyg~~ 147 (153)
T 3lei_A 137 SLAEVEVFRSA 147 (153)
T ss_dssp CEEEEEEEEBC
T ss_pred EEEEEEEEcCc
Confidence 66777777654
No 21
>4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A
Probab=97.17 E-value=0.0067 Score=64.30 Aligned_cols=133 Identities=17% Similarity=0.225 Sum_probs=93.9
Q ss_pred ceeecCcceEEEeccCCCCCccccccCCCCceeccCCCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEE
Q psy5867 20 IREVGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQSDGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDIC 99 (287)
Q Consensus 20 ~~~i~~~a~W~vSS~K~g~gv~~L~d~~~~tyWQSdg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~ 99 (287)
-.++..-+.-+.||...|++..+++|++..|||.|. ..|+||.|.+. +...|..|.
T Consensus 24 ~~NLA~gk~vTASS~~~g~~p~nAvDGn~~T~WsS~-~~~qWLqVDLG-----------------------~~~~V~~V~ 79 (914)
T 4a4a_A 24 GVEITEGVTVTAKGNTEGNTADLAIDGDLSTYWESS-NDYKWIEVDLG-----------------------GIYELSKIE 79 (914)
T ss_dssp CCBCCSSCEEEESCCCTTCCGGGGSSSCTTCCEECC-SSCCEEEEEEE-----------------------EEEEEEEEE
T ss_pred cccccCCCceEEeccCCCCcHHHeECCCCCCeEecC-CCCceEEEECC-----------------------CeEEEEEEE
Confidence 356666778889999999999999999999999999 66899999999 999999999
Q ss_pred EEeecCCCCCcCcceEEEeecCCcCCceeeeEEEccCC-Cce-EEEEeccCCCCceeEEEEEEEEEeeeecCccceeEEE
Q psy5867 100 IYTDYKLDESYTPSRVSVRAGTNFNDLQEIEVVDLNEP-SGW-VKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQI 177 (287)
Q Consensus 100 i~~~~~~DeSYtPs~I~i~~G~~~~dL~e~~~v~~~~p-~Gw-v~i~~~~~~d~~l~~f~iQi~I~~n~qfGrdthIrqI 177 (287)
++- .+..| ..-+|.+.+.-.+..++....-... .|- -.+.+ .+..+.+|+|.+..+-. +--..|..+
T Consensus 80 l~~---~~~~v--~~Y~Ie~S~DG~~Wt~v~~~t~~~~~~~~~d~v~f-----~pv~ARYVRL~~t~~~~-~~~~SI~Ef 148 (914)
T 4a4a_A 80 IFN---KDEAV--YKYNIYASEDGENFNKIAYKNNDNVSDSNGNMHTI-----DNVRAGKIRIDVVQNSN-SDRVNIAEI 148 (914)
T ss_dssp EEC---SSSSC--EEEEEEEESSSSCCEEEEEECSCCCCCTTCEEEEE-----EEEEEEEEEEEEEEETT-CSSCEESEE
T ss_pred EEe---cCCce--EEEEEEEEcCCCCeEEEEEcccCccCCCccceEEe-----CCceEEEEEEEEEecCC-CCceEEEEE
Confidence 962 23333 3566666555556666654332221 111 12333 25678899988776543 246789999
Q ss_pred EEecCCCCCC
Q psy5867 178 KVYSPVQQHP 187 (287)
Q Consensus 178 kIy~~~~~de 187 (287)
++|+....+.
T Consensus 149 eVyG~~~g~~ 158 (914)
T 4a4a_A 149 NVFGKNTGES 158 (914)
T ss_dssp EEEEEECSCC
T ss_pred EEEcCCCCCC
Confidence 9998765443
No 22
>2j1v_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; HET: NAG GAL FUC; 1.45A {Streptococcus pneumoniae} PDB: 2j1r_A* 2j1t_A* 2j1u_A* 2j1s_A*
Probab=97.14 E-value=0.024 Score=46.99 Aligned_cols=77 Identities=17% Similarity=0.094 Sum_probs=56.3
Q ss_pred eeecCcceEEEeccCCCCCccccccCCCCceecc------CCCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeee
Q psy5867 21 REVGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQS------DGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTT 94 (287)
Q Consensus 21 ~~i~~~a~W~vSS~K~g~gv~~L~d~~~~tyWQS------dg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 94 (287)
.+|.--+.=+-||.-.++......|++.+|+|.+ ++..|+|+.+.+. +...
T Consensus 16 ~NlAlgk~at~SS~~~~~~a~~AvDGn~~t~w~~~sct~t~~~~~~W~~VDLg-----------------------~~~~ 72 (151)
T 2j1v_A 16 LNIAYAKPTTQSSVDYNGDPNRAVDGNRNGNFNSGSVTHTRADNPSWWEVDLK-----------------------KMDK 72 (151)
T ss_dssp ECTTTTCCEEESCCCTTCCGGGGGSSCCCCCGGGTCCCCCCSCTTCEEEEEEE-----------------------EEEE
T ss_pred ccccCCCCeeECCCCCCCCcCccEeCCCcCcccccccccCCCCCCCEEEEECC-----------------------CCeE
Confidence 3444444456788877778899999999999986 4556899999999 9999
Q ss_pred EEEEEEEeecCCC--CCcCcceEEEeecCCc
Q psy5867 95 VQDICIYTDYKLD--ESYTPSRVSVRAGTNF 123 (287)
Q Consensus 95 i~~i~i~~~~~~D--eSYtPs~I~i~~G~~~ 123 (287)
|.+|.|+-- .| ..+. ....|++|++.
T Consensus 73 V~~V~i~~r--~d~~~~r~-~~~~I~v~~~~ 100 (151)
T 2j1v_A 73 VGLVKIYNR--TDAETQRL-SNFDVILYDNN 100 (151)
T ss_dssp EEEEEEEEC--CSSCGGGS-CSEEEEEECTT
T ss_pred cCEEEEEcC--CCcccccc-CCEEEEEECCC
Confidence 999999853 23 2232 34567777664
No 23
>1k12_A Lectin; beta barrel, protein carbohydrate complex, sugar binding protein; HET: FUC; 1.90A {Anguilla anguilla} SCOP: b.18.1.15
Probab=96.97 E-value=0.015 Score=48.43 Aligned_cols=128 Identities=14% Similarity=0.098 Sum_probs=74.7
Q ss_pred eecCcceEEEeccCCC----C-CccccccCCCCceeccC------CCCCcEEEEEEcccccccchhhhcccCceeeeeee
Q psy5867 22 EVGSQAIWSLSSCKPG----F-GVDQLRDDCMDTYWQSD------GQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFR 90 (287)
Q Consensus 22 ~i~~~a~W~vSS~K~g----~-gv~~L~d~~~~tyWQSd------g~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~ 90 (287)
+|.--..=+-||.-.+ + ......|++.+|+|.+. +..|+|+.+.+.
T Consensus 10 NlA~gk~a~aSS~~~~~~~~~~~a~~AvDGn~~t~w~s~sc~~T~~~~~~W~~VDLg----------------------- 66 (158)
T 1k12_A 10 NVAVRGKATQSAQLRGEHAANSEASNAIDGNRDSNFYHGSCTHSSGQANPWWRVDLL----------------------- 66 (158)
T ss_dssp EGGGGSEEEESCBCCSTTGGGCCGGGGGSSCCCCCGGGSCSCCBCSCSSCEEEEEEE-----------------------
T ss_pred cccCCCeeEECcccCCCCcccCCccccCcCCCCCccccccEecCCCCCCCEEEEECC-----------------------
Confidence 3333344567888776 4 48889999999999975 456799999999
Q ss_pred eeeeEEEEEEEeecCCCC-CcCcceEEEeecCCcCC--c-eeeeEEEccCCCc-eEEEEeccCCCCceeEEEEEEEEEee
Q psy5867 91 RKTTVQDICIYTDYKLDE-SYTPSRVSVRAGTNFND--L-QEIEVVDLNEPSG-WVKIPIKDIHDKPIRTYMIQIAVMSN 165 (287)
Q Consensus 91 k~~~i~~i~i~~~~~~De-SYtPs~I~i~~G~~~~d--L-~e~~~v~~~~p~G-wv~i~~~~~~d~~l~~f~iQi~I~~n 165 (287)
+...|.+|.|+-- .|. +---....|++|++..+ . ..++......+.| -..|.+ +.++...|+.|.+...
T Consensus 67 ~~~~V~~V~i~~r--~d~~~~r~~~~~i~v~~s~~~~~~~n~~~~~~~~~~~g~~~~i~~----~~~~~gRYVrv~~~g~ 140 (158)
T 1k12_A 67 QVYTITSVTITNR--GDCCGERISGAEINIGQHLASNGVNNPECSVIGSMATGETKTFHC----PAPMIGRYVVTYLPTS 140 (158)
T ss_dssp EEEEEEEEEEEEC--SSSCTTTTTTCEEEEESSCTTTTTTSCEEEECCCCCTTCEEEEEE----EEEEEEEEEEEECCSS
T ss_pred CceEEeEEEEEeC--CCcCccccCCEEEEEEcCCccccccCceeeeecccCCCCEEEEEC----CCCCeeEEEEEEECCC
Confidence 9999999999842 231 11123446777765433 2 2222211111222 233333 1245566666554321
Q ss_pred eecCccceeEEEEEecC
Q psy5867 166 HQNGRDTHMRQIKVYSP 182 (287)
Q Consensus 166 ~qfGrdthIrqIkIy~~ 182 (287)
.-.+|..+.+|+.
T Consensus 141 ----~~lsl~EveVyg~ 153 (158)
T 1k12_A 141 ----ESLHLCEVEVNVD 153 (158)
T ss_dssp ----SCCCEEEEEEEEE
T ss_pred ----CeEEEEEEEEecc
Confidence 3455666666654
No 24
>3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A
Probab=96.93 E-value=0.0096 Score=48.83 Aligned_cols=98 Identities=15% Similarity=0.192 Sum_probs=74.6
Q ss_pred EEEEEEEEEeeeecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCCCccCcceeeeeeccCCCCeEEEeccCCCC
Q psy5867 155 TYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHD 234 (287)
Q Consensus 155 ~f~iQi~I~~n~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~~~~Dl~ev~~~~l~eP~GWv~i~l~~~~~ 234 (287)
..||| +.+|+...|..|.+....... ...++.+.|.+.....++..+...++....++..+.+
T Consensus 54 p~~i~------vDLg~~~~i~~v~~~~~~~~~------~~~~~~~~I~~S~Dg~~W~~v~~~~~~~~~~~~~~~~----- 116 (159)
T 3f2z_A 54 PYEII------IDMNHRVKIAQIELLPRGRGS------NNPIKVVRFEASEDGTNWESIGQFGFTNQDAALKYYV----- 116 (159)
T ss_dssp CEEEE------EEEEEEEEEEEEEEEECCTTC------CCCCCEEEEEEESSSSSCEEEEEEECCCCSSCEEECC-----
T ss_pred CEEEE------EECCCceEEEEEEEEecCCCC------CCCeeEEEEEEEcCCCCeEEeEEeecCCCCccEEEec-----
Confidence 35777 677888889999886554211 2345567777776666788888777766567776644
Q ss_pred CceEEEEEEEEEeecccCCCcceeeeeEEeccCCC
Q psy5867 235 KPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQ 269 (287)
Q Consensus 235 ~~lr~~~lQi~Il~NHqNGrDTHIR~ikI~gP~~~ 269 (287)
.|.++.+|+|.++++..+++-..|+-|+||++...
T Consensus 117 ~~~~aRYVRi~~~~~~~~~~~~si~Ei~vy~~~~~ 151 (159)
T 3f2z_A 117 KSSTARYIKLVIPDGVGNGTVAAIRELDVRGTVVN 151 (159)
T ss_dssp CCEEEEEEEEEECSSSSCCSCCEEEEEEEEEEECC
T ss_pred CCceEEEEEEEEEeccCCCceEEEEEEEEEcCCCC
Confidence 47899999999999998878899999999999865
No 25
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=96.82 E-value=0.0091 Score=58.75 Aligned_cols=128 Identities=10% Similarity=0.133 Sum_probs=75.3
Q ss_pred ecCcceEEEeccCC-CCCccccccCCCCceeccCCCC-CcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEEE
Q psy5867 23 VGSQAIWSLSSCKP-GFGVDQLRDDCMDTYWQSDGQL-PHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICI 100 (287)
Q Consensus 23 i~~~a~W~vSS~K~-g~gv~~L~d~~~~tyWQSdg~~-pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~i 100 (287)
+..-|.=+.||... +++.+++.|++.+|||.+++.. ++||.|.|. +.+.|..|.|
T Consensus 327 LA~~~~vtASS~~~~~~~~~~a~Dgd~~TyW~a~~~~~~~wl~vDLg-----------------------~~~~vn~V~l 383 (469)
T 3eyp_A 327 LLRGAKVKATNVRGAKYSPEKMLDNEKNTYFAGKDGEVKADIIFTLP-----------------------KTIEFDCLMI 383 (469)
T ss_dssp TTTTCEEEESSCCCGGGCGGGGGSCCSSCCEECCTTCCCEEEEEEEE-----------------------EEEEEEEEEE
T ss_pred hhcCCceEEeeccCCCCChhhcccCCCCceEeCCCCCCCcEEEEECC-----------------------CCcEEeEEEE
Confidence 34456678899887 7999999999999999999876 799999999 6666666666
Q ss_pred EeecCCCCCcCcceEEEeecCCcCCceeeeEEEccCCCceEE-EEeccCCCCceeEEEEEEEEEeeeecCccceeEEEEE
Q psy5867 101 YTDYKLDESYTPSRVSVRAGTNFNDLQEIEVVDLNEPSGWVK-IPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKV 179 (287)
Q Consensus 101 ~~~~~~DeSYtPs~I~i~~G~~~~dL~e~~~v~~~~p~Gwv~-i~~~~~~d~~l~~f~iQi~I~~n~qfGrdthIrqIkI 179 (287)
.-+.....-.+=-+|.+.. +-...+++..-.-.+..|... +.+ .+.++.+|.|.|..+. -...|+.+.+
T Consensus 384 qe~i~~gqrv~~y~Ve~s~--DG~~W~~v~~gt~~~tiG~kr~~~f-----~~v~aryVRl~i~~~~---g~p~Ise~~V 453 (469)
T 3eyp_A 384 EEVIELGHRTTKWSVEYTV--DGKNWITIPEATDKQAIGHKWIVRL-----APVKAKQVRLRIQDGK---ACPAIHTFGV 453 (469)
T ss_dssp EECGGGCSCEEEEEEEEES--SSSCCEECGGGSSBCCCTTCEEEEE-----EEEEEEEEEEEEEEES---SSCEEEEEEE
T ss_pred eecccCCCCeEEEEEEEEc--CCCceEEEEecccccCCCceeEEec-----CCeeEEEEEEEEEcCC---CCeEEEEEEE
Confidence 5332211111111121111 111112111000001233321 222 2567788888876653 2577999999
Q ss_pred ecCC
Q psy5867 180 YSPV 183 (287)
Q Consensus 180 y~~~ 183 (287)
|...
T Consensus 454 y~a~ 457 (469)
T 3eyp_A 454 YKQS 457 (469)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 8654
No 26
>2j22_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; 1.8A {Streptococcus pneumoniae}
Probab=96.68 E-value=0.1 Score=43.15 Aligned_cols=76 Identities=11% Similarity=0.030 Sum_probs=54.9
Q ss_pred eecCcceEEEeccCCCCCccccccCCCCceecc------CCCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeE
Q psy5867 22 EVGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQS------DGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTV 95 (287)
Q Consensus 22 ~i~~~a~W~vSS~K~g~gv~~L~d~~~~tyWQS------dg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i 95 (287)
+|.--..=+-||.-.+.+.....|++.+|+|.+ .+..|+|+.+.+. +...|
T Consensus 14 NlAlgk~a~~SS~~~~~~a~~AvDG~~~t~w~~~sct~T~~~~~~Ww~VDLg-----------------------~~~~V 70 (148)
T 2j22_A 14 NIALTKETRQSSTDYNGFSRLAVDGNKNGDYGHHSVTHTKEDSPSWWEIDLA-----------------------QTEEL 70 (148)
T ss_dssp ETTTTCEEEESCCCTTCCGGGGGSSCCCCCGGGTCCCCCCSCTTCEEEEEEE-----------------------EEEEE
T ss_pred cccCCCceeECCCCCCCccCccEeCCCCCcccccceeccCCCCCCEEEEECC-----------------------CCEEe
Confidence 333334446778777778889999999999998 4556899999999 99999
Q ss_pred EEEEEEeecCCCC--CcCcceEEEeecCCc
Q psy5867 96 QDICIYTDYKLDE--SYTPSRVSVRAGTNF 123 (287)
Q Consensus 96 ~~i~i~~~~~~De--SYtPs~I~i~~G~~~ 123 (287)
.+|.|+-- .|- .+ -....|++|++.
T Consensus 71 ~~V~i~~r--~d~~~~r-~~~~~I~vg~s~ 97 (148)
T 2j22_A 71 EKLIIYNR--TDAEIQR-LSNFDIIIYDSN 97 (148)
T ss_dssp EEEEEEEC--CSSCGGG-SEEEEEEEECTT
T ss_pred eEEEEEec--CCCcccc-cCCEEEEEEeCC
Confidence 99999853 231 11 134567777665
No 27
>2yfu_A Carbohydrate binding family 6; sugar binding protein; 1.65A {Clostridium thermocellum} PDB: 2y8j_A* 2y9i_A* 2y9s_A 2yb7_A* 2y8m_A 2yfz_A* 2yg0_A*
Probab=96.59 E-value=0.011 Score=50.17 Aligned_cols=125 Identities=10% Similarity=0.210 Sum_probs=71.5
Q ss_pred eeecCcceEEEeccCCCCCccccccCCCCceeccCCCCCcEEEEEEcccccccchhhhcccCceeeeeeeeee--eEEEE
Q psy5867 21 REVGSQAIWSLSSCKPGFGVDQLRDDCMDTYWQSDGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKT--TVQDI 98 (287)
Q Consensus 21 ~~i~~~a~W~vSS~K~g~gv~~L~d~~~~tyWQSdg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~--~i~~i 98 (287)
+-||.-..|.= .|..++.|.|+|+.|||.+....||||.|.|. +.+ .+..+
T Consensus 10 ~~~gt~~~~~~----~~~~~~~~~DGn~~T~f~~~~~~~~~i~iDLG-----------------------~~~~~~l~~f 62 (155)
T 2yfu_A 10 TVIGTQGSWNN----IGNTIHKAFDGDLNTFFDGPTANGCWLGLDFG-----------------------EGVRNVITQI 62 (155)
T ss_dssp EEEECCSCGGG----SSCCGGGGGSSCTTCCBCCSSSSSCEEEEECC-----------------------TTCCEEEEEE
T ss_pred eEeccCCcccc----cchhhhheecCCCCcEeEcCCCCCceEEEECC-----------------------CCcceEEeeE
Confidence 45777776744 25678999999999999886666899999999 765 56666
Q ss_pred EEEeecCCCCCcCcceEEEeecC--CcCCceeeeEEEc-cCCCceEEEEeccCCCCceeEEEEEEEEEeeeecCccceeE
Q psy5867 99 CIYTDYKLDESYTPSRVSVRAGT--NFNDLQEIEVVDL-NEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMR 175 (287)
Q Consensus 99 ~i~~~~~~DeSYtPs~I~i~~G~--~~~dL~e~~~v~~-~~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qfGrdthIr 175 (287)
+.+=. ...++-+. --.+.+-+ .+.+...+.++.= ....+|..+.+. .+-.+.+++..... +..+.|-
T Consensus 63 ~Y~Pr-~~~~~~mi-Gg~fegSnd~Df~~~~tL~~I~~~P~~~~~~~v~~~----~~k~yRYiRy~~p~----~~~~niA 132 (155)
T 2yfu_A 63 KFCPR-SGYEQRMI-GGIFQGANKEDFSDAVTLFTITSLPGSGTLTSVDVD----NPTGFRYVRYLSPD----GSNGNIA 132 (155)
T ss_dssp EEECC-TTCGGGGT-TCEEEEESSTTCTTCEEEEECCSCCCTTSCEEEECC----CCCEESEEEEECCT----TSTTCBS
T ss_pred EEecC-cccccCCc-EEEEEEECCCCCCCeEEEEEecCCCcccccEEEECC----CCCcEEEEEEEcCC----CCeEEEE
Confidence 65443 22333332 34444444 3355555553321 122345655552 12223344422222 3456666
Q ss_pred EEEEecC
Q psy5867 176 QIKVYSP 182 (287)
Q Consensus 176 qIkIy~~ 182 (287)
.|.+|..
T Consensus 133 Ei~fy~~ 139 (155)
T 2yfu_A 133 ELQFFGT 139 (155)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 6666643
No 28
>3ggl_A Putative chitobiase; X-RAY, structure genomics, NESG, BTR324A, Q8A9F0_bactn, BT_0865, PSI-2, protein structure initiative; 3.00A {Bacteroides thetaiotaomicron}
Probab=96.42 E-value=0.035 Score=46.17 Aligned_cols=98 Identities=12% Similarity=0.188 Sum_probs=74.1
Q ss_pred EEEEEEEEEeeeecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCCCccCcceeeeeeccCCCCeEEEeccCCCC
Q psy5867 155 TYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHD 234 (287)
Q Consensus 155 ~f~iQi~I~~n~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~~~~Dl~ev~~~~l~eP~GWv~i~l~~~~~ 234 (287)
..||| +..|+...|..|.+....... ...++.+.|.+.....++..+...++....++..+.+
T Consensus 64 p~wi~------vDLg~~~~i~~v~~~~r~~~~------~~~~~~y~I~~S~Dg~~W~~v~~~~~~~~~~~~~~~f----- 126 (169)
T 3ggl_A 64 PYDIV------IDMKQNIQIAQVELLPRGRGS------NNPIKVVEFAASEDNVNWTPIGRFGFTNQDAALEYYV----- 126 (169)
T ss_dssp CEEEE------EEEEEEEEEEEEEEEECCTTC------CCCCCEEEEEEESSSSCCEEEEEEECCCCSSCEEECC-----
T ss_pred CEEEE------EECCCcEEEeEEEEEecCCCC------CCCeeEEEEEEeCCCCCcEEeEEEEeccCCCcEEEEe-----
Confidence 35777 677888889999886554211 2345667777777667788888777766667776644
Q ss_pred CceEEEEEEEEEeecccCCCcceeeeeEEeccCCC
Q psy5867 235 KPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQ 269 (287)
Q Consensus 235 ~~lr~~~lQi~Il~NHqNGrDTHIR~ikI~gP~~~ 269 (287)
.|.++.+|+|.+++++.+++-..|+-|+||++...
T Consensus 127 ~~~~aRYVRi~~~~~~~~~~~~si~Ei~vy~~~~~ 161 (169)
T 3ggl_A 127 KSIKARYIRLTIPDDGGNSTVAAIRELDVKGTIIN 161 (169)
T ss_dssp CCEEEEEEEEEECSSSSCCSCCEEEEEEEEEEECC
T ss_pred cCceEEEEEEEEEeCCCCCceEEEEEEEEEcCCCC
Confidence 37899999999999998778899999999998864
No 29
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=96.30 E-value=0.038 Score=49.95 Aligned_cols=72 Identities=11% Similarity=0.055 Sum_probs=53.2
Q ss_pred ceEEEeccCCCCCccccccCCCCceecc------CCCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEEE
Q psy5867 27 AIWSLSSCKPGFGVDQLRDDCMDTYWQS------DGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICI 100 (287)
Q Consensus 27 a~W~vSS~K~g~gv~~L~d~~~~tyWQS------dg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~i 100 (287)
+.-+.||...+++..+..|++.+|||.+ ++.-|+|+.|.+. +...|.+|.|
T Consensus 158 k~~taSS~~~~~~a~~AvDG~~~t~W~~~~c~~t~~~~~~W~~VDLg-----------------------~~~~v~~V~i 214 (293)
T 3cqo_A 158 GKATQSSLFESGIAYNAIDGNQANNWEMASCTHTKNTMDPWWRMDLS-----------------------QTHRVFSVKV 214 (293)
T ss_dssp SEEEESCCCTTCCGGGGGSSCCCCSGGGTCCCCCCSEESCEEEEEEE-----------------------EEEEEEEEEE
T ss_pred cceecCCCCCCCCccccccCCCCCccccCccccCCCCCCCEEEEECC-----------------------CeEEEeEEEE
Confidence 4456788888888999999999999997 3334899999999 9999999999
Q ss_pred EeecCCCCCcCcceEEEeecCCc
Q psy5867 101 YTDYKLDESYTPSRVSVRAGTNF 123 (287)
Q Consensus 101 ~~~~~~DeSYtPs~I~i~~G~~~ 123 (287)
+-. .....| .....|++|++.
T Consensus 215 ~~~-d~~~~~-~~~~~i~vs~s~ 235 (293)
T 3cqo_A 215 TNR-DSFEKR-INGAEIRIGDSL 235 (293)
T ss_dssp ECC-SSSGGG-GTTEEEEEESCC
T ss_pred Ecc-Cccccc-cCCeEEEEeccC
Confidence 865 211222 244667776543
No 30
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*
Probab=96.23 E-value=0.077 Score=52.38 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=34.5
Q ss_pred ceEEEeccCCCCCccccccCCCCceeccCCCC-CcEEEEEEc
Q psy5867 27 AIWSLSSCKPGFGVDQLRDDCMDTYWQSDGQL-PHLVNVQFR 67 (287)
Q Consensus 27 a~W~vSS~K~g~gv~~L~d~~~~tyWQSdg~~-pH~i~i~f~ 67 (287)
|.-+.||.. ++.++++|++.+|||.+++.. +++|.|.|.
T Consensus 359 ~~vtaSs~~--~~~~~a~Dgn~~TyW~a~~~~~~~~l~idLg 398 (478)
T 3ues_A 359 CEARTSSAS--AAAAHLVDGNRDTFWRPDADDAAPAITLTLP 398 (478)
T ss_dssp CEEEESSCG--GGGGGGSSSCTTCCBCCCTTCSSCEEEEEEE
T ss_pred cceEeeccc--cChhhcccCCCCceEeCCCCCCCeeEEEECC
Confidence 667778887 889999999999999998765 799999999
No 31
>2j1a_A Hyaluronidase, CBM32; protein-carbohydrate interaction, glycoside hydrolase, GH84C, hydrolase; HET: GAL; 1.49A {Clostridium perfringens} PDB: 2j1e_A* 2j7m_A*
Probab=95.78 E-value=0.14 Score=40.11 Aligned_cols=94 Identities=10% Similarity=0.122 Sum_probs=66.6
Q ss_pred EEEEEEEEEeeeecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCCCccCcceeeeeeccCCCCeEEEeccCCCC
Q psy5867 155 TYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHD 234 (287)
Q Consensus 155 ~f~iQi~I~~n~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~~~~Dl~ev~~~~l~eP~GWv~i~l~~~~~ 234 (287)
..||| +.+|+...|..|.++..... . ...++.+.|.+.....++..+...++....++..+.+.
T Consensus 52 ~~~l~------iDLg~~~~i~~v~~~~~~~~-~-----~~~~~~~~i~~S~Dg~~w~~v~~~~~~~~~~~~~~~~~---- 115 (150)
T 2j1a_A 52 PHHLT------LELDNVYEINKVKYAPRQDS-K-----NGRITGYKVSVSLDGENFTEVKTGTLEDNAAIKFIEFD---- 115 (150)
T ss_dssp CCEEE------EEEEEEEEEEEEEEECCSSC-C-----TTEEEEEEEEEESSSSSEEEEEEEECCSSSSCEEEEEE----
T ss_pred CeEEE------EECCCCeEEeEEEEeecCCC-C-----CCCEEEEEEEEEcCCCceEEEEEeeECCCCceEEEEEC----
Confidence 35777 66778888999998765432 1 23456677777665566677766666666677777774
Q ss_pred CceEEEEEEEEEeeccc---C--CCcceeeeeEEec
Q psy5867 235 KPIRTYMIQIAVMSNHQ---N--GRDTHMRQIKVYS 265 (287)
Q Consensus 235 ~~lr~~~lQi~Il~NHq---N--GrDTHIR~ikI~g 265 (287)
|.++.+|+|.+++++. + |.-..|.-|+|||
T Consensus 116 -~~~aryvRi~~~~~~~~~~~~~~~~~~i~Ei~v~G 150 (150)
T 2j1a_A 116 -SVDAKYVRLDVTDSVSDQANGRGKFATAAEVNVHG 150 (150)
T ss_dssp -EEEEEEEEEEEEEEECCC--CTTTCCEESEEEEEC
T ss_pred -CeEEEEEEEEEEecccccccCCCceEEEEEEEEeC
Confidence 6799999999998762 2 3348899999997
No 32
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=95.74 E-value=0.16 Score=45.69 Aligned_cols=127 Identities=11% Similarity=0.066 Sum_probs=77.8
Q ss_pred cCcceEEEeccCCC-CC-ccccccCCCCceeccCC------CCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeE
Q psy5867 24 GSQAIWSLSSCKPG-FG-VDQLRDDCMDTYWQSDG------QLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTV 95 (287)
Q Consensus 24 ~~~a~W~vSS~K~g-~g-v~~L~d~~~~tyWQSdg------~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i 95 (287)
.--+.=+-||...+ ++ .....|++.+|+|.+.. .-|+|+.+.+. +...|
T Consensus 7 A~~k~a~aSS~~~~~~~~a~~AvDG~~~t~W~s~~c~~t~~~~~~W~~VDLg-----------------------~~~~v 63 (293)
T 3cqo_A 7 ALRGKATQSARYLHTHGAAYNAIDGNRNSDFEAGSCTHTVEQTNPWWRVDLL-----------------------EPYIV 63 (293)
T ss_dssp GGGSEEEESSBCSSTTCCGGGGGSSCCCCCGGGSCSCCBCSBSSCEEEEEEE-----------------------EEEEE
T ss_pred CCCCceeECcCCCCCCCCcCccccCCCCCccCCCceecCCCCCCCEEEEECC-----------------------CceEE
Confidence 33344456777766 78 99999999999999864 45799999999 99999
Q ss_pred EEEEEEeecC-CCCCcCcceEEEeecCCcCC--c-eeeeEEEccCC-CceEEEEeccCCCCceeEEEEEEEEEeeeecCc
Q psy5867 96 QDICIYTDYK-LDESYTPSRVSVRAGTNFND--L-QEIEVVDLNEP-SGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGR 170 (287)
Q Consensus 96 ~~i~i~~~~~-~DeSYtPs~I~i~~G~~~~d--L-~e~~~v~~~~p-~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qfGr 170 (287)
.+|.|+.--. ..|-..+- .|++|.+... . ..++...-.-+ .+-..+.+ +.+....||.|.+.... .
T Consensus 64 ~~V~i~~r~d~~~~~~~~~--~i~v~~s~d~~~~~n~~~~~~~~~~~g~~~~~~~----~~~~~gRYVrv~~~~~~---~ 134 (293)
T 3cqo_A 64 TSITITNRGDCCPERLNGV--EIHIGNSLQENGVANPRVGVISHIPAGISHTISF----TERVEGRYVTVLLPGTN---K 134 (293)
T ss_dssp EEEEEECCSSSCGGGGTTE--EEEEESCCGGGGTTSCEEEEESCCCTTCEEEEEC----SSCCEEEEEEEECCSSS---B
T ss_pred EEEEEEeCCCCccccccCe--EEEEecCCccCCccCceecceeecCCCceEEEEe----CCCceeeEEEEEecCCC---c
Confidence 9999985311 01333344 4555554321 1 12222111212 23445554 24677888887654321 3
Q ss_pred cceeEEEEEecC
Q psy5867 171 DTHMRQIKVYSP 182 (287)
Q Consensus 171 dthIrqIkIy~~ 182 (287)
-..|..+.+|+.
T Consensus 135 ~~sl~EveVyg~ 146 (293)
T 3cqo_A 135 VLTLCEVEVHGY 146 (293)
T ss_dssp CCCCSEEEEEEE
T ss_pred ceEEEEEEEEec
Confidence 466778888875
No 33
>2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel, glycosidase, hydrolase; 2.00A {Bifidobacterium longum}
Probab=94.96 E-value=0.0043 Score=67.86 Aligned_cols=127 Identities=10% Similarity=0.133 Sum_probs=0.0
Q ss_pred eEEEe--ccCC-----C-CCccccccCCCCceeccCC-----CCC-cEEEEEEcccccccchhhhcccCceeeeeeeeee
Q psy5867 28 IWSLS--SCKP-----G-FGVDQLRDDCMDTYWQSDG-----QLP-HLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKT 93 (287)
Q Consensus 28 ~W~vS--S~K~-----g-~gv~~L~d~~~~tyWQSdg-----~~p-H~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~ 93 (287)
.|+++ |... + ..+..+.|+++.|||.|.- ..| |||.|.|. +..
T Consensus 1226 GwtATASSee~~~g~~geg~A~nAIDGD~~T~WHSaWs~ss~~~PgqWLqVDLG-----------------------e~~ 1282 (1376)
T 2zxq_A 1226 GYTVATGSEEPTAGLPSEGPADLAQDGNDSTHWHTSWSENAVGNGTAWYQFNLN-----------------------EPT 1282 (1376)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEEEccccccccCCCCCCHHHcCcCCCCCeEEecccccCCCCCceEEEEEcC-----------------------CcE
Confidence 58665 4433 2 3389999999999999873 247 99999999 555
Q ss_pred eEEEEEEEeecCCC---CCcCcceEEEeecC-CcCCceeeeEEEccCCCceEEEEeccCCCCceeEEEEEEEEEeeeecC
Q psy5867 94 TVQDICIYTDYKLD---ESYTPSRVSVRAGT-NFNDLQEIEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNG 169 (287)
Q Consensus 94 ~i~~i~i~~~~~~D---eSYtPs~I~i~~G~-~~~dL~e~~~v~~~~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qfG 169 (287)
.|..|.+ .. ..+ ..-.+....|.+.+ .-.+...+..-.+....++..+.| +.+..+.+|+|.+......+
T Consensus 1283 tIsgf~Y-qp-Rqdg~~~NG~VksYkIeVS~dDG~nWttVa~GTFsgn~t~kti~F----d~PVkARYVRf~ats~~gg~ 1356 (1376)
T 2zxq_A 1283 TINGLRY-LP-RSGGMNANGKIKGYKITLTLADGTTKDVVTDAEFSTTTMWQKASF----DAVENVTAVRLTVLSSAGQS 1356 (1376)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEE-ec-CccCCCCCCceEEEEEEEECCCCCeEEEEEeeEEcCCCceEEEEe----CCCceEEEEEEEEEEccCCC
Confidence 5555542 21 112 12234444444444 223333333222333335666665 34567788887777766532
Q ss_pred -----ccceeEEEEEecCC
Q psy5867 170 -----RDTHMRQIKVYSPV 183 (287)
Q Consensus 170 -----rdthIrqIkIy~~~ 183 (287)
+-..+..|.+|++.
T Consensus 1357 g~~~Nk~aSIAEf~Vyg~k 1375 (1376)
T 2zxq_A 1357 DSQANKFASAAELRLTTDR 1375 (1376)
T ss_dssp -------------------
T ss_pred CccccceEEEEEEEEeccC
Confidence 13567777777653
No 34
>1tvg_A LOC51668 protein; cell cycle, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Homo sapiens} SCOP: b.18.1.9 PDB: 1xpw_A
Probab=94.79 E-value=0.21 Score=41.97 Aligned_cols=100 Identities=12% Similarity=0.100 Sum_probs=69.4
Q ss_pred CCceeEEEEE---EEEEeeeecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCCCcc--CcceeeeeeccCCCCe
Q psy5867 150 DKPIRTYMIQ---IAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFN--DLQEIEVVDLNEPSGW 224 (287)
Q Consensus 150 d~~l~~f~iQ---i~I~~n~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~~~~--Dl~ev~~~~l~eP~GW 224 (287)
|++..++|.- -+.-+-++||+.+.|.++.+.. +..+.+.|.+..+.. ++.++...+|....|+
T Consensus 42 Dgn~~T~W~t~g~~Pq~i~Idf~k~~~is~~~i~~------------~~vk~~~ie~s~d~~p~~w~~i~e~ef~~~~n~ 109 (153)
T 1tvg_A 42 DGNPETFWTTTGMFPQEFIICFHKHVRIERLVIQS------------YFVQTLKIEKSTSKEPVDFEQWIEKDLVHTEGQ 109 (153)
T ss_dssp SSCTTCCEECCSCSSEEEEEEEEEEEEEEEEEEEE------------ESEEEEEEEEECSSSSCCCEEEEEEECCCCTTC
T ss_pred cCCCCceEECCCCCCcEEEEECCCceEEEEEEEEe------------cCCEEEEEEEECCCCCcceEEeEEEEecCCCCc
Confidence 4555666641 1334447788999999988863 224556666665544 8999999999988886
Q ss_pred EEE-eccCCCCCceEEEEEEEEEeecccCCCcceeeeeEEeccC
Q psy5867 225 VKI-PIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPV 267 (287)
Q Consensus 225 v~i-~l~~~~~~~lr~~~lQi~Il~NHqNGrDTHIR~ikI~gP~ 267 (287)
..+ .+. .+.+|.+|+|.|++++-.= ..|..|.|+|=.
T Consensus 110 ~Q~~~~~----~~~~a~~lRl~i~s~~d~f--v~Iy~l~v~G~~ 147 (153)
T 1tvg_A 110 LQNEEIV----AHGSATYLRFIIVSAFDHF--ASVHSVSAEGTV 147 (153)
T ss_dssp CEEEEEC----CCEEEEEEEEEEEEESSSC--CEEEEEEEEEEE
T ss_pred EEEEEcC----CCceeEEEEEEEEcccccE--EEEEEEEEEEEE
Confidence 443 332 1578999999999887764 677778888743
No 35
>2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A
Probab=94.32 E-value=0.3 Score=39.87 Aligned_cols=83 Identities=11% Similarity=0.179 Sum_probs=58.4
Q ss_pred eeecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCCCc--cCcceeeeeeccCCCCeEEE-eccCCCCCceEEEE
Q psy5867 165 NHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNF--NDLQEIEVVDLNEPSGWVKI-PIKDIHDKPIRTYM 241 (287)
Q Consensus 165 n~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~~~--~Dl~ev~~~~l~eP~GWv~i-~l~~~~~~~lr~~~ 241 (287)
-+++|+.+.|.++.+.. +.++.++|.+..+. .++..+...++.+..|+..+ .+. .+.+|.+
T Consensus 52 ~I~~~~~~~is~~~i~~------------~~~k~~~ie~s~~~~p~~w~~i~~~~f~~~~~~~q~~~f~----~~~~a~~ 115 (139)
T 2yc2_A 52 VLRLESCIRVSKITTLS------------LNVRKLAVEKCDQDKPDQFEKVFEVELANRGDRLQTEVHQ----VNIRAKY 115 (139)
T ss_dssp EEEEEEEEEEEEEEEEE------------ESEEEEEEEEECSSSCCCCEEEEEEECCCC--CCEEEEEE----EEEEEEE
T ss_pred EEECCCceEEEEEEEEe------------cCCcEEEEEEecCCCCCceEEEEEEEeecCCCCceEEEcc----CCCcEEE
Confidence 36678888888888762 22455666665543 68888888899888886444 221 1236899
Q ss_pred EEEEEeecccCCCcceeeeeEEec
Q psy5867 242 IQIAVMSNHQNGRDTHMRQIKVYS 265 (287)
Q Consensus 242 lQi~Il~NHqNGrDTHIR~ikI~g 265 (287)
|+|.|++|+-+= +.|..|+|+|
T Consensus 116 lrl~i~s~~d~f--~~iy~~~v~G 137 (139)
T 2yc2_A 116 LKFILLQGHGEF--ATVNRVSVVG 137 (139)
T ss_dssp EEEEEEEESSSC--CEEEEEEEEE
T ss_pred EEEEEEeccCce--EEEEEEEEEe
Confidence 999999999883 8888999887
No 36
>4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A*
Probab=92.55 E-value=1.6 Score=35.87 Aligned_cols=92 Identities=7% Similarity=0.161 Sum_probs=65.4
Q ss_pred EEEEEEEEEeeeecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCCCccCcceeeeeeccCCCCeEEEeccCCCC
Q psy5867 155 TYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHD 234 (287)
Q Consensus 155 ~f~iQi~I~~n~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~~~~Dl~ev~~~~l~eP~GWv~i~l~~~~~ 234 (287)
..||| +.+|+...|..|.+...... . ...++.+.|.+.....++..+....+....++..+.|.
T Consensus 70 p~~i~------iDLg~~~~I~~v~~~~r~~~-~-----~~~~~~y~I~~S~DG~~W~~v~~g~~~~~~~~~~~~f~---- 133 (161)
T 4a41_A 70 PQSIT------LELGGSYEINKFTYLPRSGA-K-----NGNITKYELHVSEDGNNFRKISEGNWDDSGSLKTLKFN---- 133 (161)
T ss_dssp CEEEE------EEEEEEEEEEEEEEECCSSC-C-----TTCEEEEEEEEESSSSCEEEEEEEECCSSSSCEEEEEE----
T ss_pred CEEEE------EEcCCCEEEeEEEEEecCCC-C-----CCcEEEEEEEEECCCCceEEeeeeeecCCCcEEEEEeC----
Confidence 45777 77888889999987654422 1 23466677877666667777776666666678777774
Q ss_pred CceEEEEEEEEEeecccCCCcceeeeeEEec
Q psy5867 235 KPIRTYMIQIAVMSNHQNGRDTHMRQIKVYS 265 (287)
Q Consensus 235 ~~lr~~~lQi~Il~NHqNGrDTHIR~ikI~g 265 (287)
|.++.+|+|.++++.- | =.-|.-|+||+
T Consensus 134 -~v~aRYVRi~~~~~~~-~-~~si~E~~Vya 161 (161)
T 4a41_A 134 -STKATHVKLVALEGVG-G-FASAAELNVFA 161 (161)
T ss_dssp -EEEEEEEEEEEEEEGG-G-CCEESEEEEEC
T ss_pred -CceEEEEEEEEEEccC-C-eEEeEeEEEEC
Confidence 5799999999999853 2 35788888875
No 37
>1xoy_A Hypothetical protein AT3G04780.1; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana} SCOP: b.18.1.26
Probab=91.82 E-value=2 Score=36.59 Aligned_cols=105 Identities=18% Similarity=0.248 Sum_probs=75.2
Q ss_pred CceeccCCCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEEEEeecCCCCCcCcceEEEeecCCc-----
Q psy5867 49 DTYWQSDGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICIYTDYKLDESYTPSRVSVRAGTNF----- 123 (287)
Q Consensus 49 ~tyWQSdg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~i~~~~~~DeSYtPs~I~i~~G~~~----- 123 (287)
..|=+||.-.==.|.|-|. .-|.|+.|.|... ++ ..|++|++.+-...
T Consensus 49 ~~~leSD~DeQLli~IPFt-----------------------~~VKl~Si~i~~~---~~-~~Pk~iKlf~N~~~ldFd~ 101 (161)
T 1xoy_A 49 GLNLESDADEQLLIYIPFN-----------------------QVIKLHSFAIKGP---EE-EGPKTVKFFSNKEHMCFSN 101 (161)
T ss_dssp TCCEECSSCSSEEEEEEEE-----------------------EEECEEEEEEECC---TT-TSEEEEEEEESCSCCCHHH
T ss_pred CccCcCCCCceEEEEeecC-----------------------CcEEEEEEEEECC---CC-CCCcEEEEeeCCCCCChhh
Confidence 4688888665566666677 9999999999843 45 89999999987332
Q ss_pred -CCceeeeEEEccCCC-ceEEEEeccCCCCceeEEEEEEEEEeeeecCccceeEEEEEecC
Q psy5867 124 -NDLQEIEVVDLNEPS-GWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSP 182 (287)
Q Consensus 124 -~dL~e~~~v~~~~p~-Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qfGrdthIrqIkIy~~ 182 (287)
.|+.-..++++.+.. ++..++++- -+-..+.-+.|-|..|.-.+-.|+|..|.++|.
T Consensus 102 a~~~~p~Q~~el~~~~~~g~~~~lr~--vkFqnV~sLtlf~~~n~~g~e~T~I~~I~l~G~ 160 (161)
T 1xoy_A 102 VNDFPPSDTAELTEENLKGKPVVLKY--VKFQNVRSLTIFIEANQSGSEVTKVQKIALYGS 160 (161)
T ss_dssp HTTSCCSEEECCCTTGGGTCCEECCT--TTCSCEEEEEEEEEEETTCCSCCEESEEEEEEC
T ss_pred hccCCCceEEECCCCcCCCcEEeccc--eeEcccCEEEEEEecCCCCCccEEEEEEEEEec
Confidence 244455788888763 347777764 234456678888888863446899999998874
No 38
>3bn6_A Lactadherin; anticoagulation, anti-coagulation, anticoagulant, anti- coagulant, membrane binding, phosphatidyl-serine binding; 1.67A {Bos taurus} PDB: 2pqs_A
Probab=90.93 E-value=1.8 Score=35.46 Aligned_cols=113 Identities=13% Similarity=0.080 Sum_probs=63.7
Q ss_pred ceEEEeccCC-------CCCccccccC-C-CCceeccCCCC-CcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEE
Q psy5867 27 AIWSLSSCKP-------GFGVDQLRDD-C-MDTYWQSDGQL-PHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQ 96 (287)
Q Consensus 27 a~W~vSS~K~-------g~gv~~L~d~-~-~~tyWQSdg~~-pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~ 96 (287)
+..+.||... +++-...|.+ + ..++|.+.... ++||.|.|. +.+.|.
T Consensus 15 ~~itASS~~~~~~~~~~~~~p~~arL~~~~~~~~W~~~~~~~~qwlqVDLg-----------------------~~~~vt 71 (158)
T 3bn6_A 15 KQITASSYYKTWGLSAFSWFPYYARLDNQGKFNAWTAQTNSASEWLQIDLG-----------------------SQKRVT 71 (158)
T ss_dssp GGEEESCCCBGGGCGGGBCCGGGCBTTCCSSSCSEECSSCCTTCCEEEEEE-----------------------EEEEEE
T ss_pred HhEEEecccccccccccccChhheEEcCCCCCCcccCCCCCCCCEEEEeCC-----------------------CceEEE
Confidence 5577888765 5777777744 3 67999998765 799999999 666666
Q ss_pred EEEEEeecCCCCCcCcceEEEeecCCcCCceeeeEE--------Ecc-CCCceEEEEeccCCCCceeEEEEEEEEEeee
Q psy5867 97 DICIYTDYKLDESYTPSRVSVRAGTNFNDLQEIEVV--------DLN-EPSGWVKIPIKDIHDKPIRTYMIQIAVMSNH 166 (287)
Q Consensus 97 ~i~i~~~~~~DeSYtPs~I~i~~G~~~~dL~e~~~v--------~~~-~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~ 166 (287)
.|.+--....++..-...-+|.+...-.+...+... .=+ ...+.+...| +.++.+.+|+|..+..+
T Consensus 72 ~v~tqg~~~~~~~~~v~~y~i~~S~Dg~~W~~~~~~~~~~~~~F~GN~d~~~~~~~~l----~~pi~ARyVRi~p~~~~ 146 (158)
T 3bn6_A 72 GIITQGARDFGHIQYVAAYRVAYGDDGVTWTEYKDPGASESKIFPGNMDNNSHKKNIF----ETPFQARFVRIQPVAWH 146 (158)
T ss_dssp EEEEECEEETTEEEEEEEEEEEEESSSSSCEECCCTTCSSCCCEECCSSSSCCEEEEE----EEEEEEEEEEEEEEEEE
T ss_pred EEEeeCCCCCCCCceEEEEEEEEECCCCceEEEEcCCCCceeeeeccCCCCeEEEEeC----CCCEEEEEEEEEEEEcC
Confidence 665533221121112233344443333333332211 001 1123444444 24678888888777665
No 39
>2jda_A Yecbm32; hypothetical protein, carbohydrate- binding module, sugar-binding protein, pectin, plant cell WALL, galacturonic acid; 1.35A {Yersinia enterocolitica} PDB: 2jd9_A
Probab=89.79 E-value=4.4 Score=31.53 Aligned_cols=93 Identities=11% Similarity=0.102 Sum_probs=60.8
Q ss_pred EEEEEEEEeeeecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCCCccCcceeeeeec--cCCCCeEEEeccCCC
Q psy5867 156 YMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQEIEVVDL--NEPSGWVKIPIKDIH 233 (287)
Q Consensus 156 f~iQi~I~~n~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~~~~Dl~ev~~~~l--~eP~GWv~i~l~~~~ 233 (287)
.||| +.+|+...|..|.+..... . ..+..+.|.+-....++..+..... ....++..+.|
T Consensus 44 ~~l~------vDLg~~~~v~~v~i~~~~~-~-------~~~~~~~i~~S~Dg~~w~~~~~~~~~~~~~~~~~~~~f---- 105 (145)
T 2jda_A 44 SWVQ------LELDKEQSIENILIVPFKP-T-------ERKLKFSIFYSNDGKNWQPLAEGLETSSADKNGEKLTF---- 105 (145)
T ss_dssp EEEE------EEEEEEEEEEEEEEEESST-T-------TCCEEEEEEEESSSSSCEEEEEEEECCCSCSSCEEEEE----
T ss_pred eeEE------EECCCceEEEEEEEEeccC-C-------CceEEEEEEEeCCCCceEEeeeCccccCCCCccEEEEe----
Confidence 6777 6778888899999876532 1 1234455555443444555554332 12235666666
Q ss_pred CCceEEEEEEEEEeecccCCCcceeeeeEEeccCC
Q psy5867 234 DKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQ 268 (287)
Q Consensus 234 ~~~lr~~~lQi~Il~NHqNGrDTHIR~ikI~gP~~ 268 (287)
.+.++.+|+|.+..+..+ .-..|+.|+|||+..
T Consensus 106 -~~~~aryvRi~~~~~~~~-~~~~i~Ei~v~g~~~ 138 (145)
T 2jda_A 106 -TPVTAKYIKLDTFGTDVN-NWSAINEIAINSAAA 138 (145)
T ss_dssp -EEEEEEEEEEEEEEESSS-SEEEEEEEEESCCCS
T ss_pred -CcccEEEEEEEEECCCCC-cEeEEEEEEEECCCC
Confidence 267999999999998753 346999999999753
No 40
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=89.56 E-value=2.9 Score=40.62 Aligned_cols=91 Identities=5% Similarity=0.045 Sum_probs=65.1
Q ss_pred eecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCCCccCcce-eeeeeccCCCCeEEEeccCCCCCceEEEEEEE
Q psy5867 166 HQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQE-IEVVDLNEPSGWVKIPIKDIHDKPIRTYMIQI 244 (287)
Q Consensus 166 ~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~~~~Dl~e-v~~~~l~eP~GWv~i~l~~~~~~~lr~~~lQi 244 (287)
+..|+...|.+|.+...... . ...++.+.|.+.+...++.+ +..-++..-.++..+.|. +.++.+|+|
T Consensus 510 vDLg~~~~i~~v~~~~r~~~-~-----~~~~~~y~i~~S~Dg~~w~~~v~~~~~~~~~~~~~~~f~-----~~~aRyvRi 578 (601)
T 1w8o_A 510 LDLGGTHTISGLQYTRRQNS-A-----NEQVADYEIYTSLNGTTWDGPVASGRFTTSLAPQRAVFP-----ARDARYIRL 578 (601)
T ss_dssp EEEEEEEEEEEEEEEECSSC-S-----TTCBCEEEEEEESSSSSCEEEEEEEECCSCSSCEEEEEE-----EEEEEEEEE
T ss_pred EECCCcEEEeEEEEecCCCC-C-----CCceEEEEEEEECCCCccceeeeeEEEcCCCceEEEEeC-----CcceEEEEE
Confidence 67788888999988654321 1 13456677887776666665 555455444467777763 579999999
Q ss_pred EEeecccCCCcceeeeeEEeccC
Q psy5867 245 AVMSNHQNGRDTHMRQIKVYSPV 267 (287)
Q Consensus 245 ~Il~NHqNGrDTHIR~ikI~gP~ 267 (287)
.+++++.++.=-.|.-|+|||+|
T Consensus 579 ~~~~~~~~~~~~~i~Ei~v~g~~ 601 (601)
T 1w8o_A 579 VALSEQTGHKYAAVAELEVEGQR 601 (601)
T ss_dssp EECCBTTSCSCCEEEEEEEEECC
T ss_pred EEEEcCCCCceEEEEEEEEEecC
Confidence 99999865566899999999975
No 41
>1wwy_A Thioredoxin-like protein 1; structural genomics, hypothetical protein, regulatory protei apoptosis, cancer; NMR {Homo sapiens}
Probab=89.52 E-value=1.9 Score=37.12 Aligned_cols=118 Identities=18% Similarity=0.185 Sum_probs=81.0
Q ss_pred CCccccccCCCCceeccCCCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEEEEeecCCCCCcCcceEEE
Q psy5867 38 FGVDQLRDDCMDTYWQSDGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICIYTDYKLDESYTPSRVSV 117 (287)
Q Consensus 38 ~gv~~L~d~~~~tyWQSdg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~i~~~~~~DeSYtPs~I~i 117 (287)
.+.++.++. ...|=+||.-.==.|.|-|. .-|.|+.|.|... ++-..|++|++
T Consensus 30 ~~~~~~l~~-~~~~leSD~DeQLli~IPFt-----------------------~~VKl~Si~i~~~---~~~~~Pk~iKl 82 (171)
T 1wwy_A 30 HGFDNCLRK-DTTFLESDCDEQLLITVAFN-----------------------QPVKLYSMKFQGP---DNGQGPKYVKI 82 (171)
T ss_dssp SCSSTTSSS-SSCCBCCSSCSCCEEEEEEE-----------------------EEEEEEEEEECCC---SSSCCBCEEEE
T ss_pred CCHHHhhcc-CCCcCcCCCCceEEEEeecC-----------------------CcEEEEEEEEECC---CCCCCCcEEEE
Confidence 355555553 34688998766567777777 9999999999753 45569999999
Q ss_pred eecC-CcCC------ceeeeEEEccCCC--ceEEEEeccCCCCceeEEEEEEEEEeeeecCccceeEEEEEecCCC
Q psy5867 118 RAGT-NFND------LQEIEVVDLNEPS--GWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQ 184 (287)
Q Consensus 118 ~~G~-~~~d------L~e~~~v~~~~p~--Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qfGrdthIrqIkIy~~~~ 184 (287)
.+-. ..-| +.-..++++.+.. ++..++++- -+-..+.-+.|-|..|.-.+-.|+|..|.++|...
T Consensus 83 f~N~~~~ldFd~a~~~~p~Q~~eL~~~~~~~g~~~~Lr~--vkFqnV~sLtlf~~~n~~g~e~T~I~~I~l~Ge~~ 156 (171)
T 1wwy_A 83 FINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRY--VKFQNVNSVTIFVQSNQGEEETTRISYFTFIGTPV 156 (171)
T ss_dssp EESCSSCCCTTHHHHSCCSSCEECCTTTSSTTCCEECCT--TTCTTEEEEEEEECCBTTCCSSCCBCCEEEEEEES
T ss_pred eecCCCCcChhhhccCCCceEEEcCCcccCCCcEEEccc--eEEcccCEEEEEEecCCCCCccEEEEEEEEEeEec
Confidence 9875 3333 3334677887652 456677753 23345556777777777444689999999988764
No 42
>2v72_A CBM32, EXO-alpha-sialidase; galactose, bacterial pathogen, carbohydrate-binding module, sugar-binding protein; HET: GAL; 2.25A {Clostridium perfringens}
Probab=88.31 E-value=5 Score=30.91 Aligned_cols=92 Identities=12% Similarity=0.103 Sum_probs=58.3
Q ss_pred eEEEEEEEEEeeeecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCCCccCcceeeeeeccCCCCeEEEeccCCC
Q psy5867 154 RTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIH 233 (287)
Q Consensus 154 ~~f~iQi~I~~n~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~~~~Dl~ev~~~~l~eP~GWv~i~l~~~~ 233 (287)
...||| +.+|+...|.+|.+........ ..++.+.|.+.....+ ..+..-++....+...+.|.
T Consensus 51 ~~~~l~------vDLg~~~~i~~v~~~~~~~~~~------~~~~~~~i~~S~Dg~~-~~v~~g~~~~~~~~~~~~f~--- 114 (143)
T 2v72_A 51 LPQSLS------VNLGKARKVSSIAITPRTSGNN------GFITKYEIHAINNGVE-TLVAEGTWEENNLVKTVTFD--- 114 (143)
T ss_dssp SCEEEE------EEEEEEEEEEEEEEECCSSCCT------TCEEEEEEEEEETTEE-EEEEEEECCSSSSCEEEEEE---
T ss_pred CCEEEE------EECCCCeEEeEEEEEecccCCC------CCEEEEEEEEEcCCCc-cEEeEEEEcCCCceEEEEeC---
Confidence 456888 6677888899999877653211 2244555665443333 33433334433456666664
Q ss_pred CCceEEEEEEEEEeecccCCCcceeeeeEEe
Q psy5867 234 DKPIRTYMIQIAVMSNHQNGRDTHMRQIKVY 264 (287)
Q Consensus 234 ~~~lr~~~lQi~Il~NHqNGrDTHIR~ikI~ 264 (287)
.|+++.+|+|.+++++. .-..|.-|+||
T Consensus 115 -~p~~aRyvRi~~~~~~~--~~~~i~Ei~v~ 142 (143)
T 2v72_A 115 -SPIDAEEIKITAIQGVG--GFASIAELNVY 142 (143)
T ss_dssp -EEEEEEEEEEEEEEEGG--GCCEESEEEEE
T ss_pred -CCCcEEEEEEEEEEcCC--CeEEEEEEEEE
Confidence 36899999999999875 34777777776
No 43
>1xoy_A Hypothetical protein AT3G04780.1; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana} SCOP: b.18.1.26
Probab=88.10 E-value=2.5 Score=35.96 Aligned_cols=88 Identities=15% Similarity=0.198 Sum_probs=64.1
Q ss_pred eecCccceeEEEEEecCCCCCCCCccccceeeEeeeecC---CCccCc---ceeeeeeccCCC-CeEEEeccCCCCCceE
Q psy5867 166 HQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAG---TNFNDL---QEIEVVDLNEPS-GWVKIPIKDIHDKPIR 238 (287)
Q Consensus 166 ~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG---~~~~Dl---~ev~~~~l~eP~-GWv~i~l~~~~~~~lr 238 (287)
+-|-..++|+.|.|.++.. ..|++|++.+. .+|.|+ .-..+++|.+.. ++..++|+- -+.-.
T Consensus 64 IPFt~~VKl~Si~i~~~~~---------~~Pk~iKlf~N~~~ldFd~a~~~~p~Q~~el~~~~~~g~~~~lr~--vkFqn 132 (161)
T 1xoy_A 64 IPFNQVIKLHSFAIKGPEE---------EGPKTVKFFSNKEHMCFSNVNDFPPSDTAELTEENLKGKPVVLKY--VKFQN 132 (161)
T ss_dssp EEEEEEECEEEEEEECCTT---------TSEEEEEEEESCSCCCHHHHTTSCCSEEECCCTTGGGTCCEECCT--TTCSC
T ss_pred eecCCcEEEEEEEEECCCC---------CCCcEEEEeeCCCCCChhhhccCCCceEEECCCCcCCCcEEeccc--eeEcc
Confidence 4466678899999987642 37888998776 344444 445788888874 448788764 24457
Q ss_pred EEEEEEEEeecccCC-CcceeeeeEEec
Q psy5867 239 TYMIQIAVMSNHQNG-RDTHMRQIKVYS 265 (287)
Q Consensus 239 ~~~lQi~Il~NHqNG-rDTHIR~ikI~g 265 (287)
+.-|+|-|..|+ .| -=|+|--|+++|
T Consensus 133 V~sLtlf~~~n~-~g~e~T~I~~I~l~G 159 (161)
T 1xoy_A 133 VRSLTIFIEANQ-SGSEVTKVQKIALYG 159 (161)
T ss_dssp EEEEEEEEEEET-TCCSCCEESEEEEEE
T ss_pred cCEEEEEEecCC-CCCccEEEEEEEEEe
Confidence 889999999997 44 459999999988
No 44
>4dxt_A SUN domain-containing protein 2; beta-sandwich, LINC complex, structural protein; 2.22A {Homo sapiens} PDB: 3unp_A 4dxr_A* 4dxs_A* 4fi9_A
Probab=87.81 E-value=4.2 Score=35.43 Aligned_cols=29 Identities=10% Similarity=0.227 Sum_probs=26.3
Q ss_pred EEEEEEEEEeecccCCCcceeeeeEEecc
Q psy5867 238 RTYMIQIAVMSNHQNGRDTHMRQIKVYSP 266 (287)
Q Consensus 238 r~~~lQi~Il~NHqNGrDTHIR~ikI~gP 266 (287)
..-.|++.|++||=|.+=|.|..+||+|-
T Consensus 167 ~~~~V~l~i~SN~G~~~~TClYr~RVhG~ 195 (198)
T 4dxt_A 167 TYQVVELRILTNWGHPEYTCIYRFRVHGE 195 (198)
T ss_dssp CEEEEEEEECCBSSCSSEEEECEEEEEEE
T ss_pred ceeEEEEEEECCCCCCCcEEEEEEEEcCE
Confidence 35689999999999999999999999994
No 45
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=87.19 E-value=0.45 Score=46.07 Aligned_cols=30 Identities=30% Similarity=0.433 Sum_probs=23.5
Q ss_pred CCCccccccCCCCceeccC----CCCCcEEEEEEc
Q psy5867 37 GFGVDQLRDDCMDTYWQSD----GQLPHLVNVQFR 67 (287)
Q Consensus 37 g~gv~~L~d~~~~tyWQSd----g~~pH~i~i~f~ 67 (287)
.+.+..|.|++ .|+|||. |.+++.++|++.
T Consensus 80 ~Hp~~~~~D~~-~twWQS~~~~~g~~~~~V~itLd 113 (403)
T 2y38_A 80 AHPVSNAIDGT-ERWWQSPPLSRGLEYNEVNVTLD 113 (403)
T ss_dssp -CCGGGTTSSS-SCCEECCCSTTCSSTTCCEEEEE
T ss_pred cCcHHHhccCC-ceeeccCCccCCCccccceeEEe
Confidence 57899999875 7999997 677777777666
No 46
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=86.62 E-value=10 Score=34.51 Aligned_cols=42 Identities=21% Similarity=0.195 Sum_probs=35.2
Q ss_pred cceEEEeccCCC--CCccccccCCCCceeccCCCC-CcEEEEEEc
Q psy5867 26 QAIWSLSSCKPG--FGVDQLRDDCMDTYWQSDGQL-PHLVNVQFR 67 (287)
Q Consensus 26 ~a~W~vSS~K~g--~gv~~L~d~~~~tyWQSdg~~-pH~i~i~f~ 67 (287)
.+..+.||...+ ++....|+++..++|.+.... +.||.|.|.
T Consensus 20 d~~itASS~~~~~~~~p~~arl~~~~~~W~~~~~~~~qwlqvDLg 64 (325)
T 2qqj_A 20 NEQISASSTYSDGRWTPQQSRLHGDDNGWTPNLDSNKEYLQVDLR 64 (325)
T ss_dssp GGGEEESCCCTTSSSCGGGCBTTCSSCCBCCSSCSTTCCEEEEEE
T ss_pred ccCEEeccccCCCccCccceeecCCCCccccCcCCcCccEEEecc
Confidence 356788888765 788999999888999998774 799999999
No 47
>4dxt_A SUN domain-containing protein 2; beta-sandwich, LINC complex, structural protein; 2.22A {Homo sapiens} PDB: 3unp_A 4dxr_A* 4dxs_A* 4fi9_A
Probab=86.56 E-value=8.3 Score=33.55 Aligned_cols=113 Identities=8% Similarity=0.058 Sum_probs=75.0
Q ss_pred cCCCCceeccCCCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEEEE-ee----cCCCCCcCcceEEEee
Q psy5867 45 DDCMDTYWQSDGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICIY-TD----YKLDESYTPSRVSVRA 119 (287)
Q Consensus 45 d~~~~tyWQSdg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~i~-~~----~~~DeSYtPs~I~i~~ 119 (287)
|.++..+|...|.+++ +.|++. +.+.+..|.|- +. +..|=+=.|+.+.|.+
T Consensus 76 ~~~pG~CW~f~g~~g~-l~I~Ls-----------------------~~I~~~~VtieHi~~~~sp~~~~~SAPKdf~V~g 131 (198)
T 4dxt_A 76 DVHPGNCWAFQGPQGF-AVVRLS-----------------------ARIRPTAVTLEHVPKALSPNSTISSAPKDFAIFG 131 (198)
T ss_dssp CCSTTCSEEEETTCEE-EEEEEE-----------------------EEEEEEEEEEECCCGGGSGGGCCTTSBCEEEEEE
T ss_pred CCCCcceeecCCCcce-eeeecC-----------------------CeEEEEEEEEEcCchhcccccCcCCCCcEEEEEE
Confidence 5578899999999874 568888 88888888883 32 2235567899999987
Q ss_pred cCCcCC--ceeeeEEEccCC-CceEEEEeccCCCCceeEEEEEEEEEeeeecCccceeEEEEEecCC
Q psy5867 120 GTNFND--LQEIEVVDLNEP-SGWVKIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPV 183 (287)
Q Consensus 120 G~~~~d--L~e~~~v~~~~p-~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qfGrdthIrqIkIy~~~ 183 (287)
=....+ -..+...+-+.. ..-..+.+.. .....+-.|++.|+.||=+..-|.|-.+++|+..
T Consensus 132 ~~~~~~~~~~~Lg~f~Y~~~~~~~QtF~l~~--~~~~~~~~V~l~i~SN~G~~~~TClYr~RVhG~~ 196 (198)
T 4dxt_A 132 FDEDLQQEGTLLGKFTYDQDGEPIQTFHFQA--PTMATYQVVELRILTNWGHPEYTCIYRFRVHGEP 196 (198)
T ss_dssp ESSSSCCCCEEEEEEECCTTSCSEEEEECSS--CCSCCEEEEEEEECCBSSCSSEEEECEEEEEEEC
T ss_pred EcCCCCCCcEEEEEEEECCCCCcceEEEeCC--CCCcceeEEEEEEECCCCCCCcEEEEEEEEcCEe
Confidence 655432 223334433322 2344555532 2223456788888888877778888888888753
No 48
>2w1s_A Hyaluronoglucosaminidase; hexosaminidase, family 32 carbohydrate binding module, toxin, secreted, virulence, hydrolase, glycosidase; HET: MSE BTB; 1.45A {Clostridium perfringens} PDB: 2w1q_A* 2w1u_A* 2wdb_A*
Probab=86.32 E-value=12 Score=31.79 Aligned_cols=98 Identities=11% Similarity=0.163 Sum_probs=60.5
Q ss_pred CccccccCCCCc-eecc-----CCCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEEEEeecC-C-CCCc
Q psy5867 39 GVDQLRDDCMDT-YWQS-----DGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICIYTDYK-L-DESY 110 (287)
Q Consensus 39 gv~~L~d~~~~t-yWQS-----dg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~i~~~~~-~-DeSY 110 (287)
...+|.|++..+ +|.+ ....++||.|.|. +.+.|..|.+.--.. . +..|
T Consensus 39 ~~arL~dg~~~t~aW~a~~~~~~~~~~qwLQVDLg-----------------------~~~~VtgV~~tQG~~~~~~~~~ 95 (192)
T 2w1s_A 39 NEANLLDGDDNTGVWYKTLNGDTSLAGEFIGLDLG-----------------------KEIKLDGIRFVIGKNGGGSSDK 95 (192)
T ss_dssp CGGGGSSSCTTCCEEEECHHHHCBCTTCEEEEEEE-----------------------EEEEEEEEEEEECCSSTTTTCC
T ss_pred hHHheeCCCCCcCEEeCCcccccCCCCceEEEECC-----------------------CeEEEEEEEEEcCCCCCCCCCe
Confidence 356899988776 9988 4556899999999 888888884433221 1 0122
Q ss_pred CcceEEEeecCCcCCceeeeEEEc-cC--CCceEEEEeccCCCCceeEEEEEEEEEe
Q psy5867 111 TPSRVSVRAGTNFNDLQEIEVVDL-NE--PSGWVKIPIKDIHDKPIRTYMIQIAVMS 164 (287)
Q Consensus 111 tPs~I~i~~G~~~~dL~e~~~v~~-~~--p~Gwv~i~~~~~~d~~l~~f~iQi~I~~ 164 (287)
...-.|.+...-.+...+..... .. ....+...| +.++.+.+|+|..+.
T Consensus 96 -vt~Y~l~yS~DG~~W~~~~~~~~~GN~d~~t~v~~~f----~~pi~ARYVRi~p~~ 147 (192)
T 2w1s_A 96 -WNKFKLEYSLDNESWTTIKEYDKTGAPAGKDVIEESF----ETPISAKYIRLTNME 147 (192)
T ss_dssp -CSEEEEEEESSSSSCEEEEEEECTTCCSSCEEEEEEE----EEEEEEEEEEEEECS
T ss_pred -EEEEEEEEEcCCCCeEEEecCCccCCcCCCcEEEEec----CCCceEEEEEEEEee
Confidence 24566666666666666655443 11 123344444 246778888866655
No 49
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=83.55 E-value=9.9 Score=34.48 Aligned_cols=42 Identities=12% Similarity=0.184 Sum_probs=35.0
Q ss_pred cceEEEeccC-CCCCccccccCCCCceeccCCCC-CcEEEEEEc
Q psy5867 26 QAIWSLSSCK-PGFGVDQLRDDCMDTYWQSDGQL-PHLVNVQFR 67 (287)
Q Consensus 26 ~a~W~vSS~K-~g~gv~~L~d~~~~tyWQSdg~~-pH~i~i~f~ 67 (287)
.+..+.||.. .+++....|+++..++|.+.... +.||.|.|.
T Consensus 20 d~~itASS~~~~~~~p~~arl~~~~~~W~~~~~~~~qwlqVDLg 63 (318)
T 2qqi_A 20 SDQITASSQYSTNWSAERSRLNYPENGWTPGEDSYREWIQVDLG 63 (318)
T ss_dssp GGGEEESCCSCGGGCGGGGBTTCSSCCBCCSSCCTTCCEEEEEE
T ss_pred hHHEEEeecCCCcCChhhhhhcCCCCeEcCCCCCCCceEEEccC
Confidence 3567888875 56788889999989999998764 799999999
No 50
>1czt_A Protein (coagulation factor V); membrane-binding, discoidin family, calcium- independent, blood clotting; 1.87A {Homo sapiens} SCOP: b.18.1.2 PDB: 1czs_A 1czv_A
Probab=83.30 E-value=17 Score=29.64 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=29.2
Q ss_pred ceEEEeccC-----CCCCccccccCC--CCceeccCCCC-CcEEEEEEc
Q psy5867 27 AIWSLSSCK-----PGFGVDQLRDDC--MDTYWQSDGQL-PHLVNVQFR 67 (287)
Q Consensus 27 a~W~vSS~K-----~g~gv~~L~d~~--~~tyWQSdg~~-pH~i~i~f~ 67 (287)
+..+.||.. .+++-...|.++ ..+.|.+.... +.||.|.|.
T Consensus 16 ~~itASS~~~~~~~~~~~p~~aRL~~~~~~~~W~a~~~~~~qwLqVDLg 64 (160)
T 1czt_A 16 KQITASSFKKSWWGDYWEPFRARLNAQGRVNAWQAKANNNKQWLEIDLL 64 (160)
T ss_dssp GGEEESCCCBCTTSCBCCGGGCBTTCCSSSCSEECSSCSTTCCEEEEEE
T ss_pred ccEEEeeecccCCCcccCcccceecCCCCCCcccCCCCCCCcEEEEeCC
Confidence 567788875 355666665544 46899887654 799999999
No 51
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=81.74 E-value=3.6 Score=39.27 Aligned_cols=30 Identities=33% Similarity=0.612 Sum_probs=20.9
Q ss_pred CCccccccC---CCCceeccC----CCC-CcEEEEEEc
Q psy5867 38 FGVDQLRDD---CMDTYWQSD----GQL-PHLVNVQFR 67 (287)
Q Consensus 38 ~gv~~L~d~---~~~tyWQSd----g~~-pH~i~i~f~ 67 (287)
+.++.|.|. ++.|+|||. |.+ |+.|+|++.
T Consensus 70 Hp~~~~~D~~~~~~~TwWQS~~~~~~~~~~~~VtitLd 107 (375)
T 4aqt_A 70 HGAAFLTDYNNQADTTWWQSQTMLAGVQYPNSINLTLH 107 (375)
T ss_dssp CCGGGGSSCCCSSSCCCEECCCGGGTCSSSCCEEEEEE
T ss_pred CCHhheeccCCCCCCceEECCCccccCCCCcceEEEEc
Confidence 567778874 456999996 344 577777665
No 52
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=80.31 E-value=2.2 Score=41.64 Aligned_cols=31 Identities=26% Similarity=0.348 Sum_probs=22.7
Q ss_pred CCCccccccCC---CCceeccCC----CCCcEEEEEEc
Q psy5867 37 GFGVDQLRDDC---MDTYWQSDG----QLPHLVNVQFR 67 (287)
Q Consensus 37 g~gv~~L~d~~---~~tyWQSdg----~~pH~i~i~f~ 67 (287)
.+.+..|.|.+ +.|+|||.. +.|+.++|++.
T Consensus 100 aHp~~~~tD~~~~~~~twWQS~~~~~~~~p~~V~itLd 137 (426)
T 3zyj_B 100 AHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLS 137 (426)
T ss_dssp CCCGGGGGSCC----CCCEEBCCCCSCSSCCCEEEEEE
T ss_pred cCCHHHeecCCCCCCCceecCCcccCCCCccceeEEEc
Confidence 45678888863 689999964 45688888876
No 53
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=80.00 E-value=3.9 Score=38.77 Aligned_cols=33 Identities=24% Similarity=0.330 Sum_probs=24.2
Q ss_pred CCCCCccccccC---CCCceeccCC----CCCcEEEEEEc
Q psy5867 35 KPGFGVDQLRDD---CMDTYWQSDG----QLPHLVNVQFR 67 (287)
Q Consensus 35 K~g~gv~~L~d~---~~~tyWQSdg----~~pH~i~i~f~ 67 (287)
+..+.+..|.|. .+.|+|||.. ++|+.++|++.
T Consensus 70 ~~aHP~~~ltD~~~~~~~TwWQS~~~~~~~~p~~VnlTL~ 109 (338)
T 3tbd_A 70 DLAHPPRLMFDKEEEGLATYWQSITWSRYPSPLEANITLS 109 (338)
T ss_dssp TTCCCGGGGSSCCCTTCCCCEEBCCSTTTTSCCCEEEEEE
T ss_pred cccCCHHHhccCCCCCCCceeccCcccCCCCCccceEEEc
Confidence 345778899985 4789999974 55787776655
No 54
>2wuh_A Discoidin domain receptor 2; receptor-peptide complex, transferase, nucleotide-binding, tyrosine-protein kinase; 1.60A {Homo sapiens} PDB: 2z4f_A
Probab=78.77 E-value=24 Score=29.65 Aligned_cols=126 Identities=12% Similarity=0.108 Sum_probs=70.5
Q ss_pred cceEEEeccC-CCCCccccccCC--CCceeccCCC----C-CcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEE
Q psy5867 26 QAIWSLSSCK-PGFGVDQLRDDC--MDTYWQSDGQ----L-PHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQD 97 (287)
Q Consensus 26 ~a~W~vSS~K-~g~gv~~L~d~~--~~tyWQSdg~----~-pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~ 97 (287)
.+..+.||.. .+++-..-|.++ ..+.|-+... . +.||.|.|. +.+.|..
T Consensus 31 d~~itASS~~~~~~~p~~aRL~~~~~~~aW~a~~~~~~d~~~qWLQVDLg-----------------------~~~~Vtg 87 (178)
T 2wuh_A 31 DEDITASSQWSESTAAKYGRLDSEEGDGAWCPEIPVEPDDLKEFLQIDLH-----------------------TLHFITL 87 (178)
T ss_dssp GGGEEESCCSSGGGSGGGCBTTCCSTTSSBCCSSCBBTTBCCCCEEEEEE-----------------------EEEEEEE
T ss_pred CcCEEEcCccCcccChhhheecCCCCCCeecCCcCCCCCCCCCEEEEecC-----------------------CceEEeE
Confidence 3567888875 456666666554 3689988775 4 789999999 8888888
Q ss_pred EEEEeecCC--CCCcCcceEEEeecCCcCCceeeeE------EEcc-CCCceEEEEeccCCCCceeEEEEEEEEEeeeec
Q psy5867 98 ICIYTDYKL--DESYTPSRVSVRAGTNFNDLQEIEV------VDLN-EPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQN 168 (287)
Q Consensus 98 i~i~~~~~~--DeSYtPs~I~i~~G~~~~dL~e~~~------v~~~-~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qf 168 (287)
|.+-=.+.. ...| .+.-+|.....-.+...+.. ..=+ ...+-+...| +.++.+.+|+|..+.-+.
T Consensus 88 V~tQG~~~~~~~~~~-vt~Y~l~yS~Dg~~W~~y~~~~~~kvF~GN~D~~t~v~~~l----~~pi~ARyVRi~p~~w~~- 161 (178)
T 2wuh_A 88 VGTQGRHAGGHGIEF-APMYKINYSRDGTRWISWRNRHGKQVLDGNSNPYDIFLKDL----EPPIVARFVRFIPVTDHS- 161 (178)
T ss_dssp EEEECCCGGGTCCCC-CSEEEEEEESSSSSCEECCCTTSCCCEECCSSSSSCEEEEE----EEEEEEEEEEEEEECSSC-
T ss_pred EEEecccCCCCccce-eEEEEEEEEcCCCcEEEEecCCccccccccCCCCceEEEeC----CCCeEEEEEEEEEEeecC-
Confidence 876543321 1223 34455655555444444321 0000 1112232233 246778888877665442
Q ss_pred CccceeEEEEEecC
Q psy5867 169 GRDTHMRQIKVYSP 182 (287)
Q Consensus 169 GrdthIrqIkIy~~ 182 (287)
....+| +.+|+.
T Consensus 162 -~~i~lR-vElyGC 173 (178)
T 2wuh_A 162 -MNVCMR-VELYGC 173 (178)
T ss_dssp -BCCCBE-EEEEEE
T ss_pred -CCeEEE-EEEecc
Confidence 223333 566654
No 55
>4deq_A Neuropilin-1, vascular endothelial growth factor; coagulation factor domain, heparin binding domain, angiogene protein binding-cytokine complex; 2.65A {Homo sapiens} PDB: 1kmx_A 1vgh_A 2vgh_A
Probab=77.14 E-value=26 Score=30.65 Aligned_cols=42 Identities=12% Similarity=0.184 Sum_probs=34.9
Q ss_pred cceEEEeccC-CCCCccccccCCCCceeccCCCC-CcEEEEEEc
Q psy5867 26 QAIWSLSSCK-PGFGVDQLRDDCMDTYWQSDGQL-PHLVNVQFR 67 (287)
Q Consensus 26 ~a~W~vSS~K-~g~gv~~L~d~~~~tyWQSdg~~-pH~i~i~f~ 67 (287)
....+.||.. .+++....|+++..++|.+.... +.||.|.|.
T Consensus 19 D~qITASS~~~~~~~P~~ARLn~~~~aW~a~~~d~~qWLQVDLg 62 (218)
T 4deq_A 19 SDQITASSQYSTNWSAERSRLNYPENGWTPGEDSYREWIQVDLG 62 (218)
T ss_dssp GGGEEESCCSCGGGCGGGCBTTCSSCCBCCSSCSTTCCEEEEEE
T ss_pred cccEEEeccCCCCCChhHeEEcCCCCeECCCCCCCCCeEEEeCC
Confidence 4667888864 47788899999888999998765 699999999
No 56
>3ecq_A Protein SPR0328, endo-alpha-N-acetylgalactosaminidase; distorted (beta/alpha)8 (TIM) barrel glycoside hydrolase DOM WALL; 2.90A {Streptococcus pneumoniae}
Probab=73.75 E-value=0.67 Score=51.04 Aligned_cols=35 Identities=9% Similarity=0.270 Sum_probs=0.0
Q ss_pred ccCCCCCccccccCCCCceeccCC---CCCcEEEEEEc
Q psy5867 33 SCKPGFGVDQLRDDCMDTYWQSDG---QLPHLVNVQFR 67 (287)
Q Consensus 33 S~K~g~gv~~L~d~~~~tyWQSdg---~~pH~i~i~f~ 67 (287)
.+.+|..++.++|++++|||+|.- ..||+|.|.|.
T Consensus 1465 ~~Q~Ge~a~nAfDGn~sT~WHT~ws~~~~Ph~ItIDLg 1502 (1531)
T 3ecq_A 1465 PAQAQEGLANAFDGNLSSLWHTSWGGGDVGKPATMVLK 1502 (1531)
T ss_dssp --------------------------------------
T ss_pred CCCCCccHHhccCCCCCCcEecCCCCCCCCeEEEEECC
Confidence 334588999999999999999854 35788888888
No 57
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=73.65 E-value=18 Score=32.71 Aligned_cols=77 Identities=10% Similarity=0.146 Sum_probs=52.0
Q ss_pred ceEEEeccC-CCCCccccccCCCCceeccC----CCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEEEE
Q psy5867 27 AIWSLSSCK-PGFGVDQLRDDCMDTYWQSD----GQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICIY 101 (287)
Q Consensus 27 a~W~vSS~K-~g~gv~~L~d~~~~tyWQSd----g~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~i~ 101 (287)
...+.||.. .+++-...|+++..++|.+. +..++||.|.+. +...|..|.+-
T Consensus 177 ~~itASS~~~~~~~p~~arl~~~~~~W~~~~a~~~~~~qwLqVDLg-----------------------~~~~Vt~V~tq 233 (318)
T 2qqi_A 177 SQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSYINEWLQIDLG-----------------------EEKIVRGIIIQ 233 (318)
T ss_dssp GGEEETTTTSTTCCGGGGBTTCCCCSCSBCCCTTCCSCCCEEEEEE-----------------------EEEEEEEEEEE
T ss_pred cccccccccccccCchhhhhcccCCceeCcccccCCcCcEEEEeCC-----------------------CceEEEEEEEc
Confidence 457788875 56677888998889999863 345799999999 88888888875
Q ss_pred eecCCC-CCcCcceEEEeecCCcCCce
Q psy5867 102 TDYKLD-ESYTPSRVSVRAGTNFNDLQ 127 (287)
Q Consensus 102 ~~~~~D-eSYtPs~I~i~~G~~~~dL~ 127 (287)
-.+..+ +.| ...-+|.+...-.+..
T Consensus 234 g~~~~~~~~~-v~~Y~l~~S~dg~~W~ 259 (318)
T 2qqi_A 234 GGKHRENKVF-MRKFKIGYSNNGSDWK 259 (318)
T ss_dssp ECCCTTCCCC-CCCEEEEEESSSSSCE
T ss_pred CccCCCCCeE-EEEEEEEEECCCCCEE
Confidence 544322 234 3345555554443433
No 58
>1wwy_A Thioredoxin-like protein 1; structural genomics, hypothetical protein, regulatory protei apoptosis, cancer; NMR {Homo sapiens}
Probab=71.87 E-value=14 Score=31.58 Aligned_cols=91 Identities=14% Similarity=0.175 Sum_probs=64.9
Q ss_pred eecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCC----CccCc---ceeeeeeccCCC--CeEEEeccCCCCCc
Q psy5867 166 HQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGT----NFNDL---QEIEVVDLNEPS--GWVKIPIKDIHDKP 236 (287)
Q Consensus 166 ~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~----~~~Dl---~ev~~~~l~eP~--GWv~i~l~~~~~~~ 236 (287)
+-|-..++|+.|.|.++.. . ..|+.|++.+.. +|.|+ .-..+++|.+.. ++..++|+-. +.
T Consensus 55 IPFt~~VKl~Si~i~~~~~--~------~~Pk~iKlf~N~~~~ldFd~a~~~~p~Q~~eL~~~~~~~g~~~~Lr~v--kF 124 (171)
T 1wwy_A 55 VAFNQPVKLYSMKFQGPDN--G------QGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYV--KF 124 (171)
T ss_dssp EEEEEEEEEEEEEECCCSS--S------CCBCEEEEEESCSSCCCTTHHHHSCCSSCEECCTTTSSTTCCEECCTT--TC
T ss_pred eecCCcEEEEEEEEECCCC--C------CCCcEEEEeecCCCCcChhhhccCCCceEEEcCCcccCCCcEEEccce--EE
Confidence 4466678899999987642 2 478889997763 34444 344777887663 5677887642 44
Q ss_pred eEEEEEEEEEeecccCCCcceeeeeEEecc
Q psy5867 237 IRTYMIQIAVMSNHQNGRDTHMRQIKVYSP 266 (287)
Q Consensus 237 lr~~~lQi~Il~NHqNGrDTHIR~ikI~gP 266 (287)
-.+.-|+|-|..|+-.+-=|+|--|.++|=
T Consensus 125 qnV~sLtlf~~~n~~g~e~T~I~~I~l~Ge 154 (171)
T 1wwy_A 125 QNVNSVTIFVQSNQGEEETTRISYFTFIGT 154 (171)
T ss_dssp TTEEEEEEEECCBTTCCSSCCBCCEEEEEE
T ss_pred cccCEEEEEEecCCCCCccEEEEEEEEEeE
Confidence 467889999999994445699999999994
No 59
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=71.79 E-value=43 Score=33.27 Aligned_cols=43 Identities=9% Similarity=0.048 Sum_probs=35.6
Q ss_pred CcceEEEeccCCCCCccccccCCCC--ceeccCCCC-----CcEEEEEEc
Q psy5867 25 SQAIWSLSSCKPGFGVDQLRDDCMD--TYWQSDGQL-----PHLVNVQFR 67 (287)
Q Consensus 25 ~~a~W~vSS~K~g~gv~~L~d~~~~--tyWQSdg~~-----pH~i~i~f~ 67 (287)
..+..+.||...+++....|+++.. ++|.+.... +.||.|.|.
T Consensus 342 ~~~~i~asS~~~~~~p~~arl~~~~~~~~W~~~~~~~~~~~~qwlqVDLg 391 (647)
T 1sdd_B 342 ADSQIQASEFWGYWEPKLARLNNGGSYNAWIAEKLSTEFNPEPWIQVDMQ 391 (647)
T ss_dssp CGGGEEESCCSTTCCGGGCBTTCCSSSCSEECSCCCCSSCCCSCEEEEEE
T ss_pred ccccccccccccccccceeeecCCCCcccccCCCCcccccccceEEeccC
Confidence 4577889999888999999988754 799987764 689999999
No 60
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=68.48 E-value=50 Score=31.14 Aligned_cols=78 Identities=10% Similarity=0.112 Sum_probs=48.9
Q ss_pred ceEEEeccC-CCCCccccccCCCCceeccC----CCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEEEE
Q psy5867 27 AIWSLSSCK-PGFGVDQLRDDCMDTYWQSD----GQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICIY 101 (287)
Q Consensus 27 a~W~vSS~K-~g~gv~~L~d~~~~tyWQSd----g~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~i~ 101 (287)
...+.||.. .+++....|+++..+.|.+. +..++||.|.+. +...|..|.+-
T Consensus 309 ~~itASS~~~~~~~p~~arl~~~~~~W~~~~~~~~~~~qwLqVDLg-----------------------~~~~vt~v~tq 365 (450)
T 2qqm_A 309 SQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSYINEWLQIDLG-----------------------EEKIVRGIIIQ 365 (450)
T ss_dssp GGEEETTTTSTTCCGGGGBTTTCSSCEEECCCSSCCCSCCEEEEEE-----------------------EEEEEEEEEEE
T ss_pred cccccccccccccCchhhhccccCCcccccccccCCcCceEEEeCC-----------------------CcEEEEEEEec
Confidence 456778874 35677888998889999853 445799999999 77777777764
Q ss_pred eecCCCCCcCcceEEEeecCCcCCce
Q psy5867 102 TDYKLDESYTPSRVSVRAGTNFNDLQ 127 (287)
Q Consensus 102 ~~~~~DeSYtPs~I~i~~G~~~~dL~ 127 (287)
-....++..--..-+|.+.+.-.+..
T Consensus 366 g~~~~~~~~~v~~Y~i~~S~dg~~W~ 391 (450)
T 2qqm_A 366 GGKHRENKVFMRKFKIGYSNNGSDWK 391 (450)
T ss_dssp CCSCTTTCCCEEEEEEEEESSSSSCE
T ss_pred CccCCCCcEEEEEEEEEEECCCCcEE
Confidence 33221212223344555544444443
No 61
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=68.45 E-value=2.4 Score=43.82 Aligned_cols=42 Identities=7% Similarity=-0.046 Sum_probs=29.6
Q ss_pred CccccccCCCCceeccCCCC----CcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEEEEee
Q psy5867 39 GVDQLRDDCMDTYWQSDGQL----PHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICIYTD 103 (287)
Q Consensus 39 gv~~L~d~~~~tyWQSdg~~----pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~i~~~ 103 (287)
+...+.|+|..|||.|...+ +|||.|.+. +-..|..|.+..-
T Consensus 604 ~~~~a~Dgd~~T~w~s~~~~~~~~g~wi~VdL~-----------------------~~~~V~~I~i~~~ 649 (716)
T 2cho_A 604 NLPLQVKANRVLISPANEVVKWAAGNSVEIELD-----------------------AIYPGENIQINFG 649 (716)
T ss_dssp CCCEEEETTEEEECC------------CEEEEE-----------------------EEEEEEEEEECC-
T ss_pred CchheeCCCcceEEECCCCccCCCCCEEEEEcC-----------------------CcEEEEEEEEecC
Confidence 57899999999999999753 799999999 8899998887554
No 62
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=64.60 E-value=46 Score=32.46 Aligned_cols=98 Identities=5% Similarity=-0.008 Sum_probs=67.4
Q ss_pred EEEEEEEEEeeeecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCCCccCc-ceeeeeeccCCCCeEEEeccCCC
Q psy5867 155 TYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDL-QEIEVVDLNEPSGWVKIPIKDIH 233 (287)
Q Consensus 155 ~f~iQi~I~~n~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~~~~Dl-~ev~~~~l~eP~GWv~i~l~~~~ 233 (287)
..||| +..|+...|.++.+........ ...++.+.|.+-+...++ ..+..-++....+...+.+.
T Consensus 69 ~~~l~------vDLg~~~~i~~v~~~~~~~~~~-----~~~~~~y~i~~S~Dg~~w~~~v~~~~~~~~~~~~~~~~~--- 134 (656)
T 1k3i_A 69 PHTYT------IDMKTTQNVNGLSMLPRQDGNQ-----NGWIGRHEVYLSSDGTNWGSPVASGSWFADSTTKYSNFE--- 134 (656)
T ss_dssp CEEEE------EEEEEEEEEEEEEEECCCSSCC-----TTCBCEEEEEEESSSSCCCSCSEEEECCSSSSCEEEEEE---
T ss_pred CceEE------ecCCCcEEEEEEEEEecccCCC-----CCCeeEEEEEEECCCCCcceeeeeeeecCCCcceeeecC---
Confidence 46777 6778888899998876543211 123455667665555556 55665666665566666663
Q ss_pred CCceEEEEEEEEEeecccCCCcceeeeeEEeccCC
Q psy5867 234 DKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQ 268 (287)
Q Consensus 234 ~~~lr~~~lQi~Il~NHqNGrDTHIR~ikI~gP~~ 268 (287)
+.++.+|+|.++++..+.+=..|.-+.||+...
T Consensus 135 --~~~aRyvRi~~~~~~~~~~~~si~E~~v~~~~~ 167 (656)
T 1k3i_A 135 --TRPARYVRLVAITEANGQPWTSIAEINVFQASS 167 (656)
T ss_dssp --EEEEEEEEEEECSBTTSCSCCEESEEEEEECSC
T ss_pred --CcceEEEEEEEecccccCCceeEEEEEEeeccc
Confidence 579999999999997654447899999998763
No 63
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=63.59 E-value=49 Score=33.90 Aligned_cols=94 Identities=11% Similarity=0.129 Sum_probs=61.5
Q ss_pred EEEEEEEEEeeeecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCCCccCcceeeeeeccCCCCeEEEeccCCCC
Q psy5867 155 TYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQEIEVVDLNEPSGWVKIPIKDIHD 234 (287)
Q Consensus 155 ~f~iQi~I~~n~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~~~~Dl~ev~~~~l~eP~GWv~i~l~~~~~ 234 (287)
..||| +..|+...|.+|.+........ -.++.+.|..-+...++..+...++....+...+.|.
T Consensus 639 p~wl~------VDLg~~~~V~~V~i~~r~~~~~------g~v~~y~I~~S~DG~~W~~v~~gt~~~~~~~~~v~f~---- 702 (737)
T 2v5d_A 639 PHHLT------LELDNVYEINKVKYAPRQDSKN------GRITGYKVSVSLDGENFTEVKTGTLEDNAAIKFIEFD---- 702 (737)
T ss_dssp CCEEE------EEEEEEEEEEEEEEECCSSCCT------TEEEEEEEEEESSSSCCCCSEEEECCSSSSCEEEEEE----
T ss_pred CeEEE------EECCCcEEEEEEEEEeccCCCC------CceEEEEEEEEcCCCceEEEEeeeecCCCceEEEEeC----
Confidence 35777 6677778888888775432111 2344555665444455666665555544566667663
Q ss_pred CceEEEEEEEEEeeccc---CCC--cceeeeeEEec
Q psy5867 235 KPIRTYMIQIAVMSNHQ---NGR--DTHMRQIKVYS 265 (287)
Q Consensus 235 ~~lr~~~lQi~Il~NHq---NGr--DTHIR~ikI~g 265 (287)
+.++.+|+|.++++.. +|+ --.|.-|+|||
T Consensus 703 -~v~ARYVRi~~~~~~~~~~~G~~~~~siaE~~VyG 737 (737)
T 2v5d_A 703 -SVDAKYVRLDVTDSVSDQANGRGKFATAAEVNVHG 737 (737)
T ss_dssp -EEEEEEEEEEEEEEECSSSSCTTTCCEESEEEEEC
T ss_pred -CceEEEEEEEEEeeccccccCCCCcEEEEEEEEEC
Confidence 5799999999999874 354 36788899887
No 64
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=59.26 E-value=1e+02 Score=27.73 Aligned_cols=42 Identities=14% Similarity=0.037 Sum_probs=33.0
Q ss_pred cceEEEeccCC-CCCccccccCCCCceeccCC----CCCcEEEEEEc
Q psy5867 26 QAIWSLSSCKP-GFGVDQLRDDCMDTYWQSDG----QLPHLVNVQFR 67 (287)
Q Consensus 26 ~a~W~vSS~K~-g~gv~~L~d~~~~tyWQSdg----~~pH~i~i~f~ 67 (287)
.+..+.||... +++-...|+++..+.|.+.. ..++|+.|.+.
T Consensus 177 d~~itASS~~~~~~~p~~arL~~~~~~W~~~~~~~~~~~qwLqVDLg 223 (325)
T 2qqj_A 177 DSQISASSTQEYLWSPSAARLVSSRSGWFPRIPQAQPGEEWLQVDLG 223 (325)
T ss_dssp GGGEEESCCCC-CCCGGGGBTTTCSSCBCCSSSSCCTTTCCEEEEEE
T ss_pred CcccccccccCcccCcchhhhccCCCccccccccCCCccceeEeccC
Confidence 35678888764 66778888888889999863 35799999999
No 65
>2wuh_A Discoidin domain receptor 2; receptor-peptide complex, transferase, nucleotide-binding, tyrosine-protein kinase; 1.60A {Homo sapiens} PDB: 2z4f_A
Probab=58.35 E-value=35 Score=28.59 Aligned_cols=93 Identities=11% Similarity=0.147 Sum_probs=53.1
Q ss_pred EEEEEEEEEeeeecCccceeEEEEEecCCCCCCCCcc-ccceeeEeeeecCCCccCcceeeeee----c---cCCCCeEE
Q psy5867 155 TYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMF-TTVECQQVSVRAGTNFNDLQEIEVVD----L---NEPSGWVK 226 (287)
Q Consensus 155 ~f~iQi~I~~n~qfGrdthIrqIkIy~~~~~des~~f-TSytpskISiraG~~~~Dl~ev~~~~----l---~eP~GWv~ 226 (287)
..||| +..|+.+.|.+|.+.+.........| ++ +.|.......++..+.... | .+..+-+.
T Consensus 72 ~qWLQ------VDLg~~~~VtgV~tQG~~~~~~~~~~vt~-----Y~l~yS~Dg~~W~~y~~~~~~kvF~GN~D~~t~v~ 140 (178)
T 2wuh_A 72 KEFLQ------IDLHTLHFITLVGTQGRHAGGHGIEFAPM-----YKINYSRDGTRWISWRNRHGKQVLDGNSNPYDIFL 140 (178)
T ss_dssp CCCEE------EEEEEEEEEEEEEEECCCGGGTCCCCCSE-----EEEEEESSSSSCEECCCTTSCCCEECCSSSSSCEE
T ss_pred CCEEE------EecCCceEEeEEEEecccCCCCccceeEE-----EEEEEEcCCCcEEEEecCCccccccccCCCCceEE
Confidence 45899 77788999999999886532111122 23 3454444434444433210 0 01112222
Q ss_pred EeccCCCCCceEEEEEEEEEeecccCCCcceeeeeEEec
Q psy5867 227 IPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYS 265 (287)
Q Consensus 227 i~l~~~~~~~lr~~~lQi~Il~NHqNGrDTHIR~ikI~g 265 (287)
..| ..|+.|.+|+|..++=| ++..-|| +.|||
T Consensus 141 ~~l----~~pi~ARyVRi~p~~w~--~~~i~lR-vElyG 172 (178)
T 2wuh_A 141 KDL----EPPIVARFVRFIPVTDH--SMNVCMR-VELYG 172 (178)
T ss_dssp EEE----EEEEEEEEEEEEEECSS--CBCCCBE-EEEEE
T ss_pred EeC----CCCeEEEEEEEEEEeec--CCCeEEE-EEEec
Confidence 222 24789999999999866 3445677 78887
No 66
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=55.28 E-value=19 Score=34.97 Aligned_cols=20 Identities=25% Similarity=0.491 Sum_probs=12.7
Q ss_pred CCCceeccCCCCCcEEEEEEc
Q psy5867 47 CMDTYWQSDGQLPHLVNVQFR 67 (287)
Q Consensus 47 ~~~tyWQSdg~~pH~i~i~f~ 67 (287)
...|.|||.. .++.|+|++.
T Consensus 90 ~~~~wwqs~~-~~~~v~itl~ 109 (525)
T 4aqs_A 90 RLKIWWQSEN-GVENVTIQLD 109 (525)
T ss_dssp -CCCCEECCT-TCCCCEEEEE
T ss_pred CCcccccCCC-CCcCeEEEEc
Confidence 4568999953 4566665555
No 67
>2vm9_A Discoidin-2, discoidin II; DDR, lectin, aggregation, cell adhesion; 1.75A {Dictyostelium discoideum} PDB: 2vmc_A* 2vmd_A* 2vme_A*
Probab=51.79 E-value=1.3e+02 Score=26.59 Aligned_cols=129 Identities=14% Similarity=0.126 Sum_probs=75.6
Q ss_pred CcceEEEeccC-CCCCccccccCCC----------CceeccCCCC-CcEEEEEEcccccccchhhhcccCceeeeeeeee
Q psy5867 25 SQAIWSLSSCK-PGFGVDQLRDDCM----------DTYWQSDGQL-PHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRK 92 (287)
Q Consensus 25 ~~a~W~vSS~K-~g~gv~~L~d~~~----------~tyWQSdg~~-pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~ 92 (287)
.....+.||.. ++++....|+++. .+.|.+.... ++||.|.|. +.
T Consensus 14 ~d~~itASS~~~~~~~p~~aRLn~~~~~~~~~~~~~~~W~a~~~d~~qwLqVDLg-----------------------~~ 70 (257)
T 2vm9_A 14 ALLNLRSSTDYNADHGVKNSILNFSNSKDASRFDGSESWSSSVLDKNQFIVAGSD-----------------------SV 70 (257)
T ss_dssp TCSEEEESCCSSGGGSGGGCBTTCCCCCCTTSCCCCSSEECSSCSTTCCEEEEEE-----------------------EE
T ss_pred cccCEEEcccCCCCCCcCeEEeCCcccccccccCCCCeeeCCCCCCCcEEeecCC-----------------------Cc
Confidence 46778888885 6788888888764 4899988764 799999999 77
Q ss_pred eeEEEEEEEeecCCCCCcCcceEEEeecCCcCCceeeeE---EEcc-CCCceEEEEeccCCCCceeEEEEEEEEEeeeec
Q psy5867 93 TTVQDICIYTDYKLDESYTPSRVSVRAGTNFNDLQEIEV---VDLN-EPSGWVKIPIKDIHDKPIRTYMIQIAVMSNHQN 168 (287)
Q Consensus 93 ~~i~~i~i~~~~~~DeSYtPs~I~i~~G~~~~dL~e~~~---v~~~-~p~Gwv~i~~~~~~d~~l~~f~iQi~I~~n~qf 168 (287)
+.|..|.+--.+..+ .| ...-+|.......+...+.. ..=+ ...+-+...| +.++.+.+|+|..+..+.
T Consensus 71 ~~Vt~V~tQG~~~~~-~~-vt~Y~l~yS~Dg~~W~~y~~~~vF~GN~d~~t~v~~~l----~~pi~ARyVRi~p~~w~~- 143 (257)
T 2vm9_A 71 KHFVAISTQGRGDHD-QW-VTSYKLRYTLDNVNWVEYNNGEIINANKDRNSIVTINF----NPPIKARSIAIHPQTYNN- 143 (257)
T ss_dssp EEEEEEEEECCSSSS-CE-EEEEEEEEESSSSCEEEGGGGCCEECCSSSSCCEEEEE----EEEEEEEEEEEEEEEEES-
T ss_pred EEEEEEEEeCCccCC-ce-EEEEEEEEEcCCCcEEEEcCCceecccCCCCceEEEeC----CCCceEEEEEeeeeeecC-
Confidence 777777664443212 22 23344444433333332211 0000 0111222223 246788899988887663
Q ss_pred CccceeEEEEEecCCCCC
Q psy5867 169 GRDTHMRQIKVYSPVQQH 186 (287)
Q Consensus 169 GrdthIrqIkIy~~~~~d 186 (287)
...+| +.+|+.....
T Consensus 144 --~i~lR-~El~Gc~~~~ 158 (257)
T 2vm9_A 144 --HISLR-WELYALPVKS 158 (257)
T ss_dssp --SCEEE-EEEEECCCCT
T ss_pred --ceEEE-EEeccCCccc
Confidence 24443 7888776433
No 68
>3bn6_A Lactadherin; anticoagulation, anti-coagulation, anticoagulant, anti- coagulant, membrane binding, phosphatidyl-serine binding; 1.67A {Bos taurus} PDB: 2pqs_A
Probab=51.04 E-value=52 Score=26.50 Aligned_cols=92 Identities=13% Similarity=0.154 Sum_probs=50.0
Q ss_pred EEEEEEEEEeeeecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCCCccCcceeeee------ec--c-CCCCeE
Q psy5867 155 TYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQEIEVV------DL--N-EPSGWV 225 (287)
Q Consensus 155 ~f~iQi~I~~n~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~~~~Dl~ev~~~------~l--~-eP~GWv 225 (287)
..||| +..|+...|.+|.+.+....+.. .| .+.+.|.......++..+... .| + +..+.+
T Consensus 57 ~qwlq------VDLg~~~~vt~v~tqg~~~~~~~-~~----v~~y~i~~S~Dg~~W~~~~~~~~~~~~~F~GN~d~~~~~ 125 (158)
T 3bn6_A 57 SEWLQ------IDLGSQKRVTGIITQGARDFGHI-QY----VAAYRVAYGDDGVTWTEYKDPGASESKIFPGNMDNNSHK 125 (158)
T ss_dssp TCCEE------EEEEEEEEEEEEEEECEEETTEE-EE----EEEEEEEEESSSSSCEECCCTTCSSCCCEECCSSSSCCE
T ss_pred CCEEE------EeCCCceEEEEEEeeCCCCCCCC-ce----EEEEEEEEECCCCceEEEEcCCCCceeeeeccCCCCeEE
Confidence 35888 66778888888888765422110 11 223445544433334333321 11 1 123444
Q ss_pred EEeccCCCCCceEEEEEEEEEeecccCCCcceeeeeEEec
Q psy5867 226 KIPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYS 265 (287)
Q Consensus 226 ~i~l~~~~~~~lr~~~lQi~Il~NHqNGrDTHIR~ikI~g 265 (287)
...|. .|++|.+|+|..++-|. .--+| +.|||
T Consensus 126 ~~~l~----~pi~ARyVRi~p~~~~~---~~~lR-~ElyG 157 (158)
T 3bn6_A 126 KNIFE----TPFQARFVRIQPVAWHN---RITLR-VELLG 157 (158)
T ss_dssp EEEEE----EEEEEEEEEEEEEEEES---SCEEE-EEEEE
T ss_pred EEeCC----CCEEEEEEEEEEEEcCC---eeEEE-EEEEc
Confidence 44443 47899999999999872 23344 55554
No 69
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=50.89 E-value=1.4e+02 Score=28.91 Aligned_cols=42 Identities=14% Similarity=0.037 Sum_probs=32.3
Q ss_pred cceEEEeccCC-CCCccccccCCCCceeccCC----CCCcEEEEEEc
Q psy5867 26 QAIWSLSSCKP-GFGVDQLRDDCMDTYWQSDG----QLPHLVNVQFR 67 (287)
Q Consensus 26 ~a~W~vSS~K~-g~gv~~L~d~~~~tyWQSdg----~~pH~i~i~f~ 67 (287)
....+.||... +++....|+++..+.|.+.. ..++|+.|.+.
T Consensus 425 d~~itASS~~~~~~~p~~arl~~~~~~W~~~~~~~~~~~qwLqVDLg 471 (579)
T 2qqk_A 425 DSQISASSTQEYLWSPSAARLVSSRSGWFPRIPQAQPGEEWLQVDLG 471 (579)
T ss_dssp GGGEEESCCCC--CCGGGGBTTTCSSCBCCSSTTCCTTTCCEEEEEE
T ss_pred ccceecccCCCcccCchhheecccCcCCcccccccCCccceEEEecC
Confidence 35678888765 56777888888899999863 34699999999
No 70
>1czt_A Protein (coagulation factor V); membrane-binding, discoidin family, calcium- independent, blood clotting; 1.87A {Homo sapiens} SCOP: b.18.1.2 PDB: 1czs_A 1czv_A
Probab=49.04 E-value=58 Score=26.39 Aligned_cols=92 Identities=11% Similarity=0.140 Sum_probs=51.2
Q ss_pred EEEEEEEEeeeecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCCCccCcceeeee------ecc---CCCCeEE
Q psy5867 156 YMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQEIEVV------DLN---EPSGWVK 226 (287)
Q Consensus 156 f~iQi~I~~n~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~~~~Dl~ev~~~------~l~---eP~GWv~ 226 (287)
.||| +..|+...|.+|.+.+...... ..| .+.+.|.......++..+... .|. +....+.
T Consensus 57 qwLq------VDLg~~~~Vt~v~tqG~~~~~~-~~~----v~~y~l~yS~Dg~~W~~~~~~~~~~~~vF~GN~d~~t~v~ 125 (160)
T 1czt_A 57 QWLE------IDLLKIKKITAIITQGCKSLSS-EMY----VKSYTIHYSEQGVEWKPYRLKSSMVDKIFEGNTNTKGHVK 125 (160)
T ss_dssp CCEE------EEEEEEEEEEEEEEECEEETTE-EEE----EEEEEEEEESSSSSCEECCCTTCSSCCCEECCSSSSCCEE
T ss_pred cEEE------EeCCCcEEEEEEEEeCcCCCCc-ccE----EEEEEEEEECCCCcEEEEEcCCCcccccccCcCCCCceEE
Confidence 5888 6677888888888876532111 111 123444443333334333211 111 1223444
Q ss_pred EeccCCCCCceEEEEEEEEEeecccCCCcceeeeeEEecc
Q psy5867 227 IPIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSP 266 (287)
Q Consensus 227 i~l~~~~~~~lr~~~lQi~Il~NHqNGrDTHIR~ikI~gP 266 (287)
..|. .|+.|.+|+|..++-|. ..-+| +.|||-
T Consensus 126 ~~l~----~pi~ARyvRi~p~~w~~---~~~~R-~ElyGc 157 (160)
T 1czt_A 126 NFFN----PPIISRFIRVIPKTWNQ---SITLR-LELFGC 157 (160)
T ss_dssp EEEE----EEEEEEEEEEEEEEEES---SCEEE-EEEEEE
T ss_pred EecC----CCEEEEEEEEEEEEeCC---ceEEE-EEEEeE
Confidence 4442 47899999999999872 45577 777774
No 71
>4a42_A GH89_CBM32-4, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: MSE; 1.55A {Clostridium perfringens}
Probab=48.32 E-value=1e+02 Score=24.55 Aligned_cols=80 Identities=13% Similarity=0.149 Sum_probs=47.0
Q ss_pred eecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCCCccCcceee-eeeccCCCCeEEEeccCCCCCceEEEEEEE
Q psy5867 166 HQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQEIE-VVDLNEPSGWVKIPIKDIHDKPIRTYMIQI 244 (287)
Q Consensus 166 ~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~~~~Dl~ev~-~~~l~eP~GWv~i~l~~~~~~~lr~~~lQi 244 (287)
+..|+...|..|.+..+.. + ++.+.|.++....++..+. .-++........+.|. .|+++.+|+|
T Consensus 67 VDLg~~~~V~~v~i~~~r~-~---------v~~y~I~~S~DG~~W~~~~~~g~~~~~~~~~~~~f~----~pv~aRYVRi 132 (149)
T 4a42_A 67 FDLSKEKDISAIDIVSKGN-S---------PLKYSIEISNDGTEWTKIVDENNNEENKAVYSNILK----SGKIGRFVRF 132 (149)
T ss_dssp EEEEEEEECCEEEEEECSS-S---------CCCEEEEEESSSSSCEEEEEETTCCCCCSEEEEECC----TTCEEEEEEE
T ss_pred EECCCcEEEEEEEEEcCCC-C---------cEEEEEEEEcCCCeEeEeEEcceeCCCCceEEEEcC----CCceEEEEEE
Confidence 5667777777777732221 1 2234455555555555532 2223233345556553 4789999999
Q ss_pred EEeecccCCCcceeeeeEEe
Q psy5867 245 AVMSNHQNGRDTHMRQIKVY 264 (287)
Q Consensus 245 ~Il~NHqNGrDTHIR~ikI~ 264 (287)
.++++ =-.|.-|+||
T Consensus 133 ~~~~~-----~~si~E~~Vy 147 (149)
T 4a42_A 133 NFNSE-----NVKIGEIKIY 147 (149)
T ss_dssp EECSS-----SCCEEEEEEE
T ss_pred EEecC-----CcEEEEEEEE
Confidence 99887 4567777776
No 72
>3hny_M Coagulation factor VIII; blood clotting, acute phase, blood coagulation, calcium, DIS mutation, disulfide bond, glycoprotein, hemophilia; 1.07A {Homo sapiens} SCOP: b.18.1.2 PDB: 3hnb_M 3hob_M 1d7p_M 1iqd_C 1cfg_A 1fac_A
Probab=46.29 E-value=1.2e+02 Score=24.60 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=30.1
Q ss_pred cceEEEeccCC----CCCccccccC--CCCceeccCCCC-CcEEEEEEc
Q psy5867 26 QAIWSLSSCKP----GFGVDQLRDD--CMDTYWQSDGQL-PHLVNVQFR 67 (287)
Q Consensus 26 ~a~W~vSS~K~----g~gv~~L~d~--~~~tyWQSdg~~-pH~i~i~f~ 67 (287)
....+.||... +++-...|-+ .....|.+.... ++|+.|.|.
T Consensus 18 d~~itASS~~~~~~~~~~p~~aRL~~~~~~~aW~a~~~d~~qwLqVDLg 66 (159)
T 3hny_M 18 DAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQ 66 (159)
T ss_dssp GGGEEESCCCBCSSCBCCGGGCBTTCCSSSCSBCCSSCSTTCCEEEEEE
T ss_pred hHHEEEecccCCCccccChhhhhhhcCCCCCccCCCCCCCCCeEEcccC
Confidence 46678888764 4555555655 346899988764 699999999
No 73
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=43.53 E-value=2.1e+02 Score=26.85 Aligned_cols=42 Identities=14% Similarity=0.037 Sum_probs=32.4
Q ss_pred cceEEEeccCC-CCCccccccCCCCceeccCC----CCCcEEEEEEc
Q psy5867 26 QAIWSLSSCKP-GFGVDQLRDDCMDTYWQSDG----QLPHLVNVQFR 67 (287)
Q Consensus 26 ~a~W~vSS~K~-g~gv~~L~d~~~~tyWQSdg----~~pH~i~i~f~ 67 (287)
....+.||... +++-...|+++..+.|.+.. ..++|+.|.+.
T Consensus 306 d~~itASS~~~~~~~p~~arl~~~~~~W~~~~~~~~~~~qwLqVDLg 352 (460)
T 2qqo_A 306 DSQISASSTQEYLWSPSAARLVSSRSGWFPRIPQAQPGEEWLQVDLG 352 (460)
T ss_dssp GGGEEESCCCSSSCCGGGGBTTTCSSCBCCSSSSCCTTTCCEEEEEE
T ss_pred ccccccccCCCcccCcchhhhccCCCCcccccccCCCccceEEEcCC
Confidence 35678888764 56777788888889999863 34699999999
No 74
>2btv_A T2A, T2B, protein (VP3 core protein); virus/viral protein, icosahedral virus; 3.50A {Bluetongue virus} SCOP: e.28.1.1
Probab=37.76 E-value=30 Score=36.40 Aligned_cols=71 Identities=23% Similarity=0.377 Sum_probs=55.6
Q ss_pred ccccccCCCCceeccCCCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeee---E----EEEEEEeecCCCCCcCc
Q psy5867 40 VDQLRDDCMDTYWQSDGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTT---V----QDICIYTDYKLDESYTP 112 (287)
Q Consensus 40 v~~L~d~~~~tyWQSdg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~---i----~~i~i~~~~~~DeSYtP 112 (287)
+.+++|+ -.|=--|.--..+.++|..++-++++ ++||||.-+.+.+..+. + .-...|+=|+.|+++||
T Consensus 762 IR~ilDd---g~~vr~G~~lR~v~~~~~~~~Pp~~i--l~~LPf~Y~~~~~~Gl~~~t~~~~~~vt~y~liYnv~~~~~P 836 (901)
T 2btv_A 762 LRRIMDD---DDWVRFGGVLRTVRVKFFDARPPDDI--LQGLPFSYDTNEKGGLSYATIKYATETTIFYLIYNVEFSNTP 836 (901)
T ss_dssp HHHHHHT---CCEEEECCCCCEEEEEEESSCCCHHH--HSCCSEEEEEECCTTTCEEEEEECCEEEEEEECCCCCTTCCT
T ss_pred HHHHhcC---CCeEEecceeeeEEEEecCCCCCHHH--HHhCCceecccccCCceeEEEEeccceEEEEEEEecCCCCCc
Confidence 5677776 56777777779999999988888864 69999999998887644 2 12345788999999999
Q ss_pred ceE
Q psy5867 113 SRV 115 (287)
Q Consensus 113 s~I 115 (287)
...
T Consensus 837 D~~ 839 (901)
T 2btv_A 837 DSL 839 (901)
T ss_dssp GGG
T ss_pred hhh
Confidence 864
No 75
>3lqc_A DNA repair protein XRCC1; allosteric disulfide, scaffolding protein, DNA repair, DNA D nucleus, phosphoprotein, polymorphism, DNA replication; HET: DNA; 2.35A {Homo sapiens} PDB: 3k75_B* 1xna_A 1xnt_A 3k77_A*
Probab=37.66 E-value=11 Score=33.05 Aligned_cols=69 Identities=19% Similarity=0.217 Sum_probs=54.0
Q ss_pred cceEEEeccCCCCCccccccCCCCceecc--CCCCCcEEEEEEcccccccchhhhcccCceeeeeeeeeeeEEEEEEEee
Q psy5867 26 QAIWSLSSCKPGFGVDQLRDDCMDTYWQS--DGQLPHLVNVQFRRKTTVQDICIYRQLPHLVNVQFRRKTTVQDICIYTD 103 (287)
Q Consensus 26 ~a~W~vSS~K~g~gv~~L~d~~~~tyWQS--dg~~pH~i~i~f~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~i~i~~~ 103 (287)
..+-+.||--+.+.+++|++.+.-.=|++ .|..-..|-+||. +-..|..|-|==.
T Consensus 7 k~Vvs~SSED~~~~AeNLL~~d~~rkW~~~~~gek~~~VeLQle-----------------------~~~~I~~IDIGN~ 63 (189)
T 3lqc_A 7 RHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLE-----------------------KEEQIHSVDIGND 63 (189)
T ss_dssp EEEEEETTSCHHHHHHHHHTCHHHHHHHHHTTTCSEEEEEEEEE-----------------------EEECCCEEEEEEE
T ss_pred eEEEEEcCCCCCCchhhccCCCCCCceeccCCCCceEEEEEEcC-----------------------CceEeeEEeecCC
Confidence 34568899999999999999765456997 4655577888888 9999999998633
Q ss_pred cCCCCCcCcceEEEeecCCcC
Q psy5867 104 YKLDESYTPSRVSVRAGTNFN 124 (287)
Q Consensus 104 ~~~DeSYtPs~I~i~~G~~~~ 124 (287)
-. .-|.|.+|.+.+
T Consensus 64 gS-------AfIEVlVgrS~~ 77 (189)
T 3lqc_A 64 GS-------AFVEVLVGSSAG 77 (189)
T ss_dssp BC-------SEEEEEEECCTT
T ss_pred ce-------EEEEEEeecccC
Confidence 33 679999998864
No 76
>2vm9_A Discoidin-2, discoidin II; DDR, lectin, aggregation, cell adhesion; 1.75A {Dictyostelium discoideum} PDB: 2vmc_A* 2vmd_A* 2vme_A*
Probab=37.43 E-value=1.5e+02 Score=26.15 Aligned_cols=93 Identities=15% Similarity=0.198 Sum_probs=55.0
Q ss_pred EEEEEEEEEeeeecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCCCccCcceeeeee-c--c-CCCCeEEEecc
Q psy5867 155 TYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQEIEVVD-L--N-EPSGWVKIPIK 230 (287)
Q Consensus 155 ~f~iQi~I~~n~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~~~~Dl~ev~~~~-l--~-eP~GWv~i~l~ 230 (287)
..||| +..|+...|.+|.+-+....++ | .+.+.|.......++..+..-. + + +...=+...|
T Consensus 60 ~qwLq------VDLg~~~~Vt~V~tQG~~~~~~---~----vt~Y~l~yS~Dg~~W~~y~~~~vF~GN~d~~t~v~~~l- 125 (257)
T 2vm9_A 60 NQFIV------AGSDSVKHFVAISTQGRGDHDQ---W----VTSYKLRYTLDNVNWVEYNNGEIINANKDRNSIVTINF- 125 (257)
T ss_dssp TCCEE------EEEEEEEEEEEEEEECCSSSSC---E----EEEEEEEEESSSSCEEEGGGGCCEECCSSSSCCEEEEE-
T ss_pred CcEEe------ecCCCcEEEEEEEEeCCccCCc---e----EEEEEEEEEcCCCcEEEEcCCceecccCCCCceEEEeC-
Confidence 45899 6778889999999988764322 2 1234455444433444333210 0 0 0011111111
Q ss_pred CCCCCceEEEEEEEEEeecccCCCcceeeeeEEeccCC
Q psy5867 231 DIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQ 268 (287)
Q Consensus 231 ~~~~~~lr~~~lQi~Il~NHqNGrDTHIR~ikI~gP~~ 268 (287)
..|++|.+|+|..++-|. ..-+| +.|||-..
T Consensus 126 ---~~pi~ARyVRi~p~~w~~---~i~lR-~El~Gc~~ 156 (257)
T 2vm9_A 126 ---NPPIKARSIAIHPQTYNN---HISLR-WELYALPV 156 (257)
T ss_dssp ---EEEEEEEEEEEEEEEEES---SCEEE-EEEEECCC
T ss_pred ---CCCceEEEEEeeeeeecC---ceEEE-EEeccCCc
Confidence 247899999999999883 36788 88999764
No 77
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=37.17 E-value=55 Score=30.83 Aligned_cols=41 Identities=12% Similarity=0.189 Sum_probs=32.6
Q ss_pred ceEEEeccCC-CCCccccccCCCCceeccCCCC-CcEEEEEEc
Q psy5867 27 AIWSLSSCKP-GFGVDQLRDDCMDTYWQSDGQL-PHLVNVQFR 67 (287)
Q Consensus 27 a~W~vSS~K~-g~gv~~L~d~~~~tyWQSdg~~-pH~i~i~f~ 67 (287)
...+.||.-. +++....|++++.++|.+.... ++||.|.|.
T Consensus 153 ~~itASS~~~~~~~p~~arl~~~~~~W~~~~~~~~qwlqvDLg 195 (450)
T 2qqm_A 153 DQITASSQYSTNWSAERSRLNYPENGWTPGEDSYREWIQVDLG 195 (450)
T ss_dssp GGEEESCCSCGGGCGGGGBTTCSSCCBCCSSCSTTCCEEEEEE
T ss_pred ccccccccccccchhhccccccCCCCccCCCCCCCceEEEccc
Confidence 4567787643 6778888999889999986654 699999998
No 78
>3hny_M Coagulation factor VIII; blood clotting, acute phase, blood coagulation, calcium, DIS mutation, disulfide bond, glycoprotein, hemophilia; 1.07A {Homo sapiens} SCOP: b.18.1.2 PDB: 3hnb_M 3hob_M 1d7p_M 1iqd_C 1cfg_A 1fac_A
Probab=30.07 E-value=1.9e+02 Score=23.29 Aligned_cols=92 Identities=12% Similarity=0.109 Sum_probs=49.1
Q ss_pred EEEEEEEEEeeeecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCCCccCcceeeee----ec--c-CCCCeEEE
Q psy5867 155 TYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQEIEVV----DL--N-EPSGWVKI 227 (287)
Q Consensus 155 ~f~iQi~I~~n~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~~~~Dl~ev~~~----~l--~-eP~GWv~i 227 (287)
..||| +..|+...|.+|.+.+...... ..| .+.+.|.....-.++..+..- .| + +...-+..
T Consensus 58 ~qwLq------VDLg~~~~VtgV~tqG~~~~~~-~~~----v~~y~l~yS~Dg~~W~~~~~~~~~~vF~GN~d~~t~v~~ 126 (159)
T 3hny_M 58 KEWLQ------VDFQKTMKVTGVTTQGVKSLLT-SMY----VKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVN 126 (159)
T ss_dssp TCCEE------EEEEEEEEEEEEEEECEEETTE-EEE----EEEEEEEEESSSSSCEECEETTEECCEECCSSSSSCEEE
T ss_pred CCeEE------cccCCcEEEEEEEeecCCCCCc-cce----EEEEEEEEEECCCcEEEEecCCceEeeeccCCCCcEEEE
Confidence 45888 6677888888888876542111 111 123445444444444443320 00 0 01111111
Q ss_pred eccCCCCCceEEEEEEEEEeecccCCCcceeeeeEEec
Q psy5867 228 PIKDIHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKVYS 265 (287)
Q Consensus 228 ~l~~~~~~~lr~~~lQi~Il~NHqNGrDTHIR~ikI~g 265 (287)
.| +.|+.|.+|+|..++=|. .-.+| +.|||
T Consensus 127 ~l----~~pi~ARyvRi~P~~w~~---~i~lR-~El~G 156 (159)
T 3hny_M 127 SL----DPPLLTRYLRIHPQSWVH---QIALR-MEVLG 156 (159)
T ss_dssp EE----EEEEEEEEEEEEEEEEES---SCCBE-EEEEE
T ss_pred EC----CCCcEEEEEEEEEEEeCC---ccEEE-EEEEc
Confidence 12 248999999999998763 24566 66776
No 79
>2w1s_A Hyaluronoglucosaminidase; hexosaminidase, family 32 carbohydrate binding module, toxin, secreted, virulence, hydrolase, glycosidase; HET: MSE BTB; 1.45A {Clostridium perfringens} PDB: 2w1q_A* 2w1u_A* 2wdb_A*
Probab=26.83 E-value=2.8e+02 Score=23.18 Aligned_cols=91 Identities=14% Similarity=0.176 Sum_probs=52.1
Q ss_pred EEEEEEEEeeeecCccceeEEE-EEecCCCCCCCCccccceeeEeeeecCCCccCcceeeeeec--c-CCCCeEEEeccC
Q psy5867 156 YMIQIAVMSNHQNGRDTHMRQI-KVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQEIEVVDL--N-EPSGWVKIPIKD 231 (287)
Q Consensus 156 f~iQi~I~~n~qfGrdthIrqI-kIy~~~~~des~~fTSytpskISiraG~~~~Dl~ev~~~~l--~-eP~GWv~i~l~~ 231 (287)
.||| +..|+...|.+| .+.+........-+++ +.|..-....++..+..... + +....+...|.
T Consensus 66 qwLQ------VDLg~~~~VtgV~~tQG~~~~~~~~~vt~-----Y~l~yS~DG~~W~~~~~~~~~GN~d~~t~v~~~f~- 133 (192)
T 2w1s_A 66 EFIG------LDLGKEIKLDGIRFVIGKNGGGSSDKWNK-----FKLEYSLDNESWTTIKEYDKTGAPAGKDVIEESFE- 133 (192)
T ss_dssp CEEE------EEEEEEEEEEEEEEEECCSSTTTTCCCSE-----EEEEEESSSSSCEEEEEEECTTCCSSCEEEEEEEE-
T ss_pred ceEE------EECCCeEEEEEEEEEcCCCCCCCCCeEEE-----EEEEEEcCCCCeEEEecCCccCCcCCCcEEEEecC-
Confidence 5899 778888899999 6665543210011133 44554444455555554432 1 11233444443
Q ss_pred CCCCceEEEEEEEEEeecccCCCcceeeeeEE
Q psy5867 232 IHDKPIRTYMIQIAVMSNHQNGRDTHMRQIKV 263 (287)
Q Consensus 232 ~~~~~lr~~~lQi~Il~NHqNGrDTHIR~ikI 263 (287)
.|+.|.+|+|..+++ .+ .=..+..|||
T Consensus 134 ---~pi~ARYVRi~p~~~-~~-~w~~~~elRV 160 (192)
T 2w1s_A 134 ---TPISAKYIRLTNMEN-IN-KWLTFSEFAI 160 (192)
T ss_dssp ---EEEEEEEEEEEECSC-BS-CCEEEEEEEE
T ss_pred ---CCceEEEEEEEEeeC-CC-ccceEEEEEE
Confidence 478999999999985 11 1134678888
No 80
>4gwi_A Lectinolysin, platelet aggregation factor SM-HPAF; cholesterol-dependent cytolysins, lewis antigens, F-type LEC glycan binding; HET: BDZ; 1.60A {Streptococcus mitis} PDB: 4gwj_A* 3lei_A* 3leg_A* 3le0_A* 3lek_A*
Probab=26.66 E-value=2.5e+02 Score=22.58 Aligned_cols=31 Identities=3% Similarity=0.237 Sum_probs=23.7
Q ss_pred ceEEEEEEEEEeecccCCCcceeeeeEEeccCCC
Q psy5867 236 PIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQ 269 (287)
Q Consensus 236 ~lr~~~lQi~Il~NHqNGrDTHIR~ikI~gP~~~ 269 (287)
++++.+|+|.+..+ ++=-+|--+.|||....
T Consensus 119 ~~~gRYVrv~~~~~---~~~lsL~EveVyg~~~~ 149 (153)
T 4gwi_A 119 AKDARYVKVELKTK---NTPLSLAEVEVFRSATT 149 (153)
T ss_dssp EEEEEEEEEEECSS---SBCCCEEEEEEEEBC--
T ss_pred CceEEEEEEEEEcC---CCceEEEEEEEECcccc
Confidence 57899999999865 33678999999997653
No 81
>1k12_A Lectin; beta barrel, protein carbohydrate complex, sugar binding protein; HET: FUC; 1.90A {Anguilla anguilla} SCOP: b.18.1.15
Probab=23.34 E-value=2.8e+02 Score=22.07 Aligned_cols=28 Identities=11% Similarity=0.192 Sum_probs=22.3
Q ss_pred ceEEEEEEEEEeecccCCCcceeeeeEEeccC
Q psy5867 236 PIRTYMIQIAVMSNHQNGRDTHMRQIKVYSPV 267 (287)
Q Consensus 236 ~lr~~~lQi~Il~NHqNGrDTHIR~ikI~gP~ 267 (287)
++++.+|+|.+..+ +--+|--++|||..
T Consensus 127 ~~~gRYVrv~~~g~----~~lsl~EveVyg~~ 154 (158)
T 1k12_A 127 PMIGRYVVTYLPTS----ESLHLCEVEVNVDK 154 (158)
T ss_dssp EEEEEEEEEECCSS----SCCCEEEEEEEEEE
T ss_pred CCeeEEEEEEECCC----CeEEEEEEEEeccc
Confidence 57899999999755 55788899999853
No 82
>4a3z_A GH89_CBM32, alpha-N-acetylglucosaminidase family protein; hydrolase, family 32 carbohydrate-binding module; HET: MSE; 1.55A {Clostridium perfringens} PDB: 4a6o_A*
Probab=22.11 E-value=3.2e+02 Score=22.18 Aligned_cols=91 Identities=10% Similarity=-0.011 Sum_probs=47.7
Q ss_pred EEEEEEEEEeeeecCccceeEEEEEecCCCCCCCCccccceeeEeeeecCCCccCcceeeeeeccCCCC-eEEEeccCCC
Q psy5867 155 TYMIQIAVMSNHQNGRDTHMRQIKVYSPVQQHPSTMFTTVECQQVSVRAGTNFNDLQEIEVVDLNEPSG-WVKIPIKDIH 233 (287)
Q Consensus 155 ~f~iQi~I~~n~qfGrdthIrqIkIy~~~~~des~~fTSytpskISiraG~~~~Dl~ev~~~~l~eP~G-Wv~i~l~~~~ 233 (287)
..|+| +..|+-..|..|.|+-... +....+.|.+.+.-.++..+....-+ ..| -..+.|.
T Consensus 66 ~~Wi~------VDLg~~~~v~~v~i~~~~~---------~~~~~y~IevS~Dg~~W~~v~~~t~~-~~~~~~~~~~~--- 126 (161)
T 4a3z_A 66 PANAT------IDLEGNNFVDFLELHFEKE---------GFRFQFKVEVEDESGNRETVLDMTSN-TEDNKKSYNIP--- 126 (161)
T ss_dssp SEEEE------EEEEEEEEEEEEEEECSST---------TCCEEEEEEEECTTCCEEEEEECTTC-CSCCCSEEEEE---
T ss_pred CeEEE------EECCCcEEEeEEEEEECCC---------CceEEEEEEEEcCCCCEEEEEEecCC-CCCccEEEEcC---
Confidence 35777 5566777777777754321 11123445554444444444332211 111 1112221
Q ss_pred CCceEEEEEEEEEeecccCCC----cceeeeeEEec
Q psy5867 234 DKPIRTYMIQIAVMSNHQNGR----DTHMRQIKVYS 265 (287)
Q Consensus 234 ~~~lr~~~lQi~Il~NHqNGr----DTHIR~ikI~g 265 (287)
.+.++.+|+|.++.+-.+|. =--|.-++||+
T Consensus 127 -~~~~aRYVRv~~~~~~~~g~~~~~~~si~E~~V~s 161 (161)
T 4a3z_A 127 -VKKEISKIHATITGKAPGGSFDQAWAAIAEIKAMS 161 (161)
T ss_dssp -EEEEEEEEEEEEEEECSCSTTTTCCCEESEEEEEC
T ss_pred -CCcEEEEEEEEEEecCCCccccCCCCEEEEEEEeC
Confidence 24578899999998876631 13577777663
Done!