Query psy5876
Match_columns 143
No_of_seqs 175 out of 1307
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 20:19:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5876.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5876hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 99.8 2.1E-19 7.3E-24 138.6 12.1 99 1-107 19-122 (304)
2 3ow8_A WD repeat-containing pr 99.8 2.4E-19 8.3E-24 140.0 12.5 99 1-107 212-315 (321)
3 2ymu_A WD-40 repeat protein; u 99.8 1.7E-19 5.8E-24 148.2 12.1 98 1-107 22-123 (577)
4 3ow8_A WD repeat-containing pr 99.8 4.4E-19 1.5E-23 138.6 12.1 99 1-107 170-273 (321)
5 2ymu_A WD-40 repeat protein; u 99.8 4.3E-19 1.5E-23 145.8 12.1 98 1-107 473-574 (577)
6 4h5i_A Guanine nucleotide-exch 99.8 5.4E-19 1.8E-23 140.5 11.1 99 1-107 225-337 (365)
7 1got_B GT-beta; complex (GTP-b 99.8 1.2E-18 4.2E-23 136.3 12.9 99 1-107 232-337 (340)
8 3fm0_A Protein CIAO1; WDR39,SG 99.8 1.1E-18 3.8E-23 137.0 12.1 99 1-107 22-130 (345)
9 3iz6_a 40S ribosomal protein R 99.8 1.1E-18 3.7E-23 138.7 10.7 99 1-107 255-369 (380)
10 2pbi_B Guanine nucleotide-bind 99.8 4.6E-18 1.6E-22 134.2 12.9 99 1-107 246-351 (354)
11 2ynn_A Coatomer subunit beta'; 99.8 5.9E-18 2E-22 130.5 12.3 99 1-107 61-166 (304)
12 4gqb_B Methylosome protein 50; 99.8 3.5E-18 1.2E-22 135.4 11.2 99 1-107 220-325 (344)
13 1nr0_A Actin interacting prote 99.8 3.7E-18 1.3E-22 143.6 11.9 99 1-107 454-561 (611)
14 2hes_X YDR267CP; beta-propelle 99.8 8.7E-18 3E-22 131.1 12.9 99 1-107 64-178 (330)
15 4ery_A WD repeat-containing pr 99.8 8.7E-18 3E-22 128.8 12.7 99 1-107 29-132 (312)
16 1vyh_C Platelet-activating fac 99.8 3.1E-18 1.1E-22 137.6 10.5 99 1-107 114-217 (410)
17 3fm0_A Protein CIAO1; WDR39,SG 99.8 1.1E-17 3.7E-22 131.3 12.8 99 1-107 67-175 (345)
18 1got_B GT-beta; complex (GTP-b 99.7 1.2E-17 4E-22 130.7 12.5 99 1-107 190-295 (340)
19 4g56_B MGC81050 protein; prote 99.7 5.1E-18 1.7E-22 134.3 10.5 99 1-107 232-337 (357)
20 1nr0_A Actin interacting prote 99.7 1.1E-17 3.7E-22 140.8 12.7 99 1-107 153-264 (611)
21 1erj_A Transcriptional repress 99.7 1E-17 3.5E-22 133.6 11.8 98 1-107 70-190 (393)
22 1erj_A Transcriptional repress 99.7 1.6E-17 5.5E-22 132.4 12.9 99 1-107 129-232 (393)
23 3frx_A Guanine nucleotide-bind 99.7 2E-17 6.8E-22 128.5 13.0 98 1-107 202-311 (319)
24 4ery_A WD repeat-containing pr 99.7 2.7E-17 9.1E-22 126.1 13.0 99 1-107 71-174 (312)
25 2hes_X YDR267CP; beta-propelle 99.7 3.3E-17 1.1E-21 127.8 13.4 99 1-107 113-224 (330)
26 3frx_A Guanine nucleotide-bind 99.7 3.4E-17 1.2E-21 127.2 13.3 99 1-107 71-179 (319)
27 1vyh_C Platelet-activating fac 99.7 1.7E-17 5.7E-22 133.3 11.7 93 7-107 308-405 (410)
28 2xzm_R RACK1; ribosome, transl 99.7 3.9E-17 1.3E-21 127.7 13.4 99 1-107 82-197 (343)
29 2j04_A TAU60, YPL007P, hypothe 99.7 6E-18 2E-22 143.8 8.7 95 1-107 91-205 (588)
30 4aow_A Guanine nucleotide-bind 99.7 6E-17 2.1E-21 123.9 13.2 98 1-107 221-331 (340)
31 2xzm_R RACK1; ribosome, transl 99.7 4E-17 1.4E-21 127.6 12.3 96 4-107 35-143 (343)
32 4h5i_A Guanine nucleotide-exch 99.7 3.3E-17 1.1E-21 130.1 11.2 98 1-105 139-242 (365)
33 2pm7_B Protein transport prote 99.7 5.1E-17 1.7E-21 124.9 11.5 99 1-107 15-126 (297)
34 4gqb_B Methylosome protein 50; 99.7 8.3E-17 2.8E-21 127.4 13.0 99 1-107 133-240 (344)
35 3zwl_B Eukaryotic translation 99.7 1.2E-16 4E-21 122.9 13.4 130 1-132 224-368 (369)
36 2w18_A PALB2, fancn, partner a 99.7 2.2E-17 7.7E-22 133.1 9.5 105 1-107 184-351 (356)
37 2pbi_B Guanine nucleotide-bind 99.7 1.1E-16 3.7E-21 126.3 13.1 99 1-107 160-265 (354)
38 3zwl_B Eukaryotic translation 99.7 1.2E-16 4.2E-21 122.7 12.5 95 1-103 38-136 (369)
39 3f3f_A Nucleoporin SEH1; struc 99.7 1.7E-16 5.8E-21 120.1 12.6 99 1-107 17-137 (351)
40 2pm7_B Protein transport prote 99.7 8.8E-17 3E-21 123.5 10.9 93 7-107 170-279 (297)
41 3vl1_A 26S proteasome regulato 99.7 1.3E-16 4.5E-21 125.9 12.2 98 2-107 104-206 (420)
42 1sq9_A Antiviral protein SKI8; 99.7 1.2E-16 4.1E-21 125.1 11.7 99 1-107 239-389 (397)
43 1pgu_A Actin interacting prote 99.7 1.4E-16 4.6E-21 130.9 12.5 98 1-107 494-608 (615)
44 3k26_A Polycomb protein EED; W 99.7 1.5E-16 5.3E-21 122.3 12.0 99 1-107 75-186 (366)
45 2aq5_A Coronin-1A; WD40 repeat 99.7 1.8E-16 6.1E-21 125.8 12.2 99 1-107 87-201 (402)
46 3dwl_C Actin-related protein 2 99.7 2.4E-17 8.1E-22 128.8 6.9 99 1-107 17-125 (377)
47 3mkq_A Coatomer beta'-subunit; 99.7 1.3E-16 4.4E-21 135.8 11.9 99 1-107 19-122 (814)
48 3bg1_A Protein SEC13 homolog; 99.7 8.9E-17 3.1E-21 124.7 9.9 99 1-107 19-130 (316)
49 3lrv_A PRE-mRNA-splicing facto 99.7 9.1E-17 3.1E-21 125.4 10.0 98 1-107 131-238 (343)
50 3vu4_A KMHSV2; beta-propeller 99.7 9.5E-17 3.2E-21 126.7 10.1 99 1-107 201-330 (355)
51 4ggc_A P55CDC, cell division c 99.7 1.9E-16 6.6E-21 120.0 10.9 95 1-107 31-132 (318)
52 2oaj_A Protein SNI1; WD40 repe 99.7 1.2E-16 4.2E-21 141.0 11.1 98 1-107 494-655 (902)
53 4e54_B DNA damage-binding prot 99.7 8.2E-17 2.8E-21 129.7 8.7 99 1-107 125-234 (435)
54 1r5m_A SIR4-interacting protei 99.7 3.4E-16 1.2E-20 122.3 11.9 99 1-107 51-174 (425)
55 3dm0_A Maltose-binding peripla 99.7 3.6E-16 1.2E-20 132.8 12.7 99 1-107 436-544 (694)
56 3bg1_A Protein SEC13 homolog; 99.7 1.8E-16 6.2E-21 122.9 9.9 93 7-107 179-287 (316)
57 1k8k_C P40, ARP2/3 complex 41 99.7 4.8E-16 1.6E-20 120.2 12.0 99 1-107 14-121 (372)
58 3mmy_A MRNA export factor; mRN 99.7 4.2E-16 1.4E-20 119.7 11.4 99 1-107 45-154 (368)
59 3dwl_C Actin-related protein 2 99.7 1.7E-16 5.9E-21 123.9 9.3 99 1-107 106-230 (377)
60 3vl1_A 26S proteasome regulato 99.7 6E-17 2E-21 127.9 6.7 99 1-107 145-272 (420)
61 3jrp_A Fusion protein of prote 99.7 4.4E-16 1.5E-20 120.3 11.3 99 1-107 17-128 (379)
62 1gxr_A ESG1, transducin-like e 99.7 8E-16 2.7E-20 117.0 12.5 99 1-107 230-331 (337)
63 4g56_B MGC81050 protein; prote 99.7 2.3E-16 7.7E-21 124.8 9.4 98 1-107 100-207 (357)
64 1gxr_A ESG1, transducin-like e 99.7 9.9E-16 3.4E-20 116.5 12.7 99 1-107 189-290 (337)
65 3vu4_A KMHSV2; beta-propeller 99.7 7.1E-16 2.4E-20 121.7 12.2 97 2-107 144-265 (355)
66 3ei3_B DNA damage-binding prot 99.7 3.3E-16 1.1E-20 122.9 10.2 99 1-107 79-188 (383)
67 4gga_A P55CDC, cell division c 99.7 8.4E-16 2.9E-20 123.1 12.6 103 1-107 282-389 (420)
68 3lrv_A PRE-mRNA-splicing facto 99.7 1.5E-16 5.3E-21 124.1 7.8 98 1-107 176-286 (343)
69 2j04_B YDR362CP, TAU91; beta p 99.7 5.5E-17 1.9E-21 136.0 5.0 98 2-107 317-422 (524)
70 3iz6_a 40S ribosomal protein R 99.7 4.1E-16 1.4E-20 123.8 9.7 98 2-107 212-323 (380)
71 4e54_B DNA damage-binding prot 99.7 4.8E-16 1.6E-20 125.2 10.2 99 1-107 170-276 (435)
72 3dw8_B Serine/threonine-protei 99.6 4.6E-16 1.6E-20 123.6 9.7 98 1-107 34-201 (447)
73 3ei3_B DNA damage-binding prot 99.6 1.9E-15 6.4E-20 118.6 13.0 98 1-107 169-276 (383)
74 2oaj_A Protein SNI1; WD40 repe 99.6 7.9E-16 2.7E-20 135.8 11.9 98 1-107 23-123 (902)
75 1r5m_A SIR4-interacting protei 99.6 1.6E-15 5.6E-20 118.5 12.4 98 1-107 295-419 (425)
76 3dm0_A Maltose-binding peripla 99.6 1.2E-15 4.1E-20 129.6 12.5 99 1-107 388-497 (694)
77 2oit_A Nucleoporin 214KDA; NH2 99.6 2E-16 7E-21 129.1 7.1 99 1-107 98-217 (434)
78 2pm9_A Protein WEB1, protein t 99.6 4.4E-16 1.5E-20 122.4 8.3 99 1-107 18-139 (416)
79 2j04_A TAU60, YPL007P, hypothe 99.6 5.7E-16 2E-20 131.7 9.1 94 1-107 135-248 (588)
80 1sq9_A Antiviral protein SKI8; 99.6 2.2E-15 7.4E-20 117.9 11.6 98 1-107 192-316 (397)
81 2aq5_A Coronin-1A; WD40 repeat 99.6 1.6E-15 5.6E-20 120.2 10.7 99 1-107 137-248 (402)
82 3f3f_A Nucleoporin SEH1; struc 99.6 2.9E-15 1E-19 113.3 11.6 64 38-107 215-331 (351)
83 1yfq_A Cell cycle arrest prote 99.6 1.4E-15 4.9E-20 116.5 10.0 98 1-107 17-125 (342)
84 4gga_A P55CDC, cell division c 99.6 2.2E-15 7.4E-20 120.7 11.2 95 1-107 111-212 (420)
85 4gq1_A NUP37; propeller, trans 99.6 3.7E-16 1.3E-20 124.8 6.7 98 2-107 96-212 (393)
86 2pm9_A Protein WEB1, protein t 99.6 3.3E-16 1.1E-20 123.1 6.1 99 1-107 268-408 (416)
87 1k8k_C P40, ARP2/3 complex 41 99.6 6E-15 2E-19 114.0 13.0 98 1-107 148-268 (372)
88 3sfz_A APAF-1, apoptotic pepti 99.6 3.3E-15 1.1E-19 133.0 12.8 99 1-107 621-726 (1249)
89 3odt_A Protein DOA1; ubiquitin 99.6 3.7E-15 1.3E-19 112.5 11.1 96 1-107 190-290 (313)
90 4aow_A Guanine nucleotide-bind 99.6 6.4E-15 2.2E-19 112.6 11.9 99 1-107 44-153 (340)
91 3mkq_A Coatomer beta'-subunit; 99.6 3.4E-15 1.2E-19 127.0 11.2 99 1-107 61-166 (814)
92 3i2n_A WD repeat-containing pr 99.6 1.4E-15 4.9E-20 116.7 7.9 99 1-107 215-347 (357)
93 3dw8_B Serine/threonine-protei 99.6 5.9E-15 2E-19 117.1 11.1 97 1-107 183-309 (447)
94 2vdu_B TRNA (guanine-N(7)-)-me 99.6 3.7E-15 1.3E-19 120.3 9.5 99 1-107 108-223 (450)
95 1yfq_A Cell cycle arrest prote 99.6 7.6E-15 2.6E-19 112.5 10.8 96 1-106 199-316 (342)
96 3jrp_A Fusion protein of prote 99.6 7.3E-15 2.5E-19 113.4 10.6 94 6-107 171-281 (379)
97 3i2n_A WD repeat-containing pr 99.6 5.9E-15 2E-19 113.3 9.8 98 2-107 175-285 (357)
98 3gre_A Serine/threonine-protei 99.6 5.4E-15 1.8E-19 117.8 9.0 97 3-107 178-286 (437)
99 1pgu_A Actin interacting prote 99.6 2.3E-14 7.8E-19 117.6 13.0 94 1-103 24-137 (615)
100 4a11_B DNA excision repair pro 99.6 2E-14 7E-19 111.9 11.8 99 1-107 192-359 (408)
101 3k26_A Polycomb protein EED; W 99.6 6.5E-15 2.2E-19 113.2 8.9 97 1-107 121-254 (366)
102 4gq1_A NUP37; propeller, trans 99.6 5E-15 1.7E-19 118.2 8.0 99 1-107 142-280 (393)
103 4aez_A CDC20, WD repeat-contai 99.6 2.1E-14 7.3E-19 114.1 11.1 101 1-107 223-330 (401)
104 2vdu_B TRNA (guanine-N(7)-)-me 99.6 1.5E-14 5E-19 116.8 10.3 98 1-107 155-265 (450)
105 3sfz_A APAF-1, apoptotic pepti 99.6 3.1E-14 1.1E-18 126.8 13.1 99 1-107 663-768 (1249)
106 4ggc_A P55CDC, cell division c 99.6 4.3E-14 1.5E-18 107.0 12.1 102 2-107 203-309 (318)
107 3jro_A Fusion protein of prote 99.6 1.7E-14 5.7E-19 124.5 10.9 99 1-107 15-126 (753)
108 2xyi_A Probable histone-bindin 99.6 2.6E-14 9E-19 115.0 11.3 99 1-107 283-404 (430)
109 3gre_A Serine/threonine-protei 99.6 1.7E-14 5.9E-19 114.9 10.0 99 1-107 117-239 (437)
110 4aez_A CDC20, WD repeat-contai 99.5 4.1E-14 1.4E-18 112.4 11.9 97 1-107 140-242 (401)
111 3mmy_A MRNA export factor; mRN 99.5 2.2E-14 7.6E-19 110.0 9.8 89 10-106 231-339 (368)
112 1l0q_A Surface layer protein; 99.5 7.7E-14 2.6E-18 109.2 12.7 101 1-107 37-141 (391)
113 4a11_B DNA excision repair pro 99.5 4.3E-14 1.5E-18 110.0 10.1 99 1-107 49-169 (408)
114 3v7d_B Cell division control p 99.5 1.1E-13 3.9E-18 110.9 12.6 97 2-107 127-230 (464)
115 2oit_A Nucleoporin 214KDA; NH2 99.5 1.1E-13 3.6E-18 113.0 12.3 92 1-100 155-258 (434)
116 2j04_B YDR362CP, TAU91; beta p 99.5 8.3E-14 2.8E-18 116.7 11.8 98 1-107 213-336 (524)
117 3v7d_B Cell division control p 99.5 1.5E-13 5.2E-18 110.2 12.5 96 2-107 275-375 (464)
118 1l0q_A Surface layer protein; 99.5 2.2E-13 7.5E-18 106.6 12.8 100 1-107 79-183 (391)
119 3odt_A Protein DOA1; ubiquitin 99.5 1.1E-13 3.8E-18 104.3 10.2 96 2-107 149-249 (313)
120 2hqs_A Protein TOLB; TOLB, PAL 99.5 3.6E-13 1.2E-17 108.7 13.4 99 1-103 184-287 (415)
121 2xyi_A Probable histone-bindin 99.5 2.9E-13 9.9E-18 108.9 11.8 99 1-107 237-347 (430)
122 3bws_A Protein LP49; two-domai 99.5 1.1E-12 3.6E-17 104.0 12.9 106 1-107 308-426 (433)
123 2ecf_A Dipeptidyl peptidase IV 99.4 3.6E-13 1.2E-17 114.1 9.9 95 1-103 42-172 (741)
124 3jro_A Fusion protein of prote 99.4 7.1E-13 2.4E-17 114.3 11.7 99 1-107 59-183 (753)
125 2ecf_A Dipeptidyl peptidase IV 99.4 6.5E-13 2.2E-17 112.6 10.0 94 1-104 114-230 (741)
126 2w18_A PALB2, fancn, partner a 99.4 3.5E-13 1.2E-17 108.6 7.9 101 1-107 117-263 (356)
127 1z68_A Fibroblast activation p 99.4 3.1E-13 1E-17 114.6 7.6 95 1-103 65-189 (719)
128 2ovr_B FBW7, F-BOX/WD repeat p 99.4 2.8E-12 9.6E-17 102.8 12.3 94 2-105 324-430 (445)
129 1z68_A Fibroblast activation p 99.4 4.6E-13 1.6E-17 113.5 7.4 98 1-102 21-129 (719)
130 3bws_A Protein LP49; two-domai 99.4 2.1E-12 7.2E-17 102.3 10.4 95 1-102 175-273 (433)
131 2hqs_A Protein TOLB; TOLB, PAL 99.4 4E-12 1.4E-16 102.5 11.7 97 1-103 228-331 (415)
132 2ojh_A Uncharacterized protein 99.4 1.8E-12 6.2E-17 96.1 8.5 98 1-105 47-152 (297)
133 1p22_A F-BOX/WD-repeat protein 99.4 5.5E-12 1.9E-16 101.1 11.9 94 2-107 138-236 (435)
134 1xfd_A DIP, dipeptidyl aminope 99.4 1.7E-13 5.8E-18 115.7 3.2 99 1-102 22-133 (723)
135 1k32_A Tricorn protease; prote 99.4 4.5E-12 1.5E-16 112.5 11.8 102 1-104 384-493 (1045)
136 1xfd_A DIP, dipeptidyl aminope 99.3 1.3E-12 4.4E-17 110.3 7.3 97 1-104 66-194 (723)
137 2ovr_B FBW7, F-BOX/WD repeat p 99.3 1.4E-11 4.9E-16 98.6 11.6 94 2-107 124-222 (445)
138 1ri6_A Putative isomerase YBHE 99.3 6.3E-12 2.2E-16 95.7 9.1 101 1-107 43-154 (343)
139 3o4h_A Acylamino-acid-releasin 99.3 9.5E-13 3.2E-17 109.3 4.8 98 1-106 155-269 (582)
140 2z3z_A Dipeptidyl aminopeptida 99.3 8.8E-12 3E-16 105.2 9.9 101 1-104 126-279 (706)
141 2ojh_A Uncharacterized protein 99.3 2.6E-11 9E-16 89.8 11.4 96 1-103 134-237 (297)
142 4a5s_A Dipeptidyl peptidase 4 99.3 8.3E-12 2.8E-16 107.1 9.7 95 2-105 68-193 (740)
143 1nir_A Nitrite reductase; hemo 99.3 1.1E-11 3.6E-16 104.0 9.6 97 2-106 144-250 (543)
144 3scy_A Hypothetical bacterial 99.3 3.6E-11 1.2E-15 93.7 11.9 100 1-106 216-330 (361)
145 1p22_A F-BOX/WD-repeat protein 99.3 4.2E-11 1.4E-15 95.9 11.8 93 3-107 262-359 (435)
146 3vgz_A Uncharacterized protein 99.3 5.5E-11 1.9E-15 91.2 11.3 97 1-103 236-334 (353)
147 1ri6_A Putative isomerase YBHE 99.3 3.4E-11 1.2E-15 91.7 9.9 100 1-106 89-202 (343)
148 3hfq_A Uncharacterized protein 99.2 1.5E-10 5.3E-15 89.4 12.9 99 1-106 91-211 (347)
149 1jmx_B Amine dehydrogenase; ox 99.2 3.5E-11 1.2E-15 91.9 8.9 96 1-103 5-112 (349)
150 1nir_A Nitrite reductase; hemo 99.2 1.2E-10 4.2E-15 97.6 12.9 99 1-106 184-304 (543)
151 1pby_B Quinohemoprotein amine 99.2 4.9E-11 1.7E-15 90.6 9.4 99 1-100 39-152 (337)
152 3u4y_A Uncharacterized protein 99.2 8.8E-11 3E-15 89.8 10.9 98 1-105 45-151 (331)
153 3o4h_A Acylamino-acid-releasin 99.2 2.5E-11 8.5E-16 100.8 8.3 99 2-104 116-216 (582)
154 4a5s_A Dipeptidyl peptidase 4 99.2 4.9E-11 1.7E-15 102.3 10.3 98 1-102 22-131 (740)
155 3vgz_A Uncharacterized protein 99.2 1.6E-10 5.4E-15 88.6 12.0 100 1-107 190-297 (353)
156 3u4y_A Uncharacterized protein 99.2 2.3E-10 7.9E-15 87.4 12.4 100 1-107 89-201 (331)
157 3scy_A Hypothetical bacterial 99.2 3.1E-10 1.1E-14 88.3 13.2 96 1-102 160-278 (361)
158 2z3z_A Dipeptidyl aminopeptida 99.2 3.8E-11 1.3E-15 101.3 7.9 92 1-103 87-201 (706)
159 3hfq_A Uncharacterized protein 99.2 2.6E-10 9E-15 88.1 11.8 99 1-106 146-264 (347)
160 1jmx_B Amine dehydrogenase; ox 99.2 9.1E-11 3.1E-15 89.6 8.7 100 1-102 48-166 (349)
161 1jof_A Carboxy-CIS,CIS-muconat 99.2 4.4E-10 1.5E-14 88.4 12.8 96 1-102 150-274 (365)
162 2bkl_A Prolyl endopeptidase; m 99.2 5.3E-11 1.8E-15 101.5 7.9 104 1-104 126-248 (695)
163 2xdw_A Prolyl endopeptidase; a 99.2 1.9E-10 6.4E-15 98.2 10.7 101 1-102 130-252 (710)
164 2gop_A Trilobed protease; beta 99.1 1.5E-10 5.2E-15 89.2 8.8 102 1-103 64-190 (347)
165 3azo_A Aminopeptidase; POP fam 99.1 2.1E-10 7.1E-15 96.2 9.5 102 1-104 135-263 (662)
166 1jof_A Carboxy-CIS,CIS-muconat 99.0 1.6E-09 5.5E-14 85.1 11.3 101 1-106 88-217 (365)
167 1k32_A Tricorn protease; prote 99.0 6.4E-10 2.2E-14 98.7 8.8 94 1-103 343-441 (1045)
168 3pe7_A Oligogalacturonate lyas 99.0 4.7E-09 1.6E-13 81.8 11.4 92 2-100 42-142 (388)
169 1pby_B Quinohemoprotein amine 99.0 1.5E-09 5.2E-14 82.2 7.8 87 8-101 2-100 (337)
170 2oiz_A Aromatic amine dehydrog 98.9 1.2E-08 4.2E-13 80.8 11.7 87 1-95 259-360 (361)
171 3azo_A Aminopeptidase; POP fam 98.9 2.1E-09 7.2E-14 90.0 7.3 100 4-104 87-209 (662)
172 3c5m_A Oligogalacturonate lyas 98.9 3E-09 1E-13 82.7 7.4 102 1-103 243-371 (396)
173 1q7f_A NHL, brain tumor CG1071 98.9 1.5E-08 5.2E-13 76.2 11.0 96 1-106 169-273 (286)
174 1yr2_A Prolyl oligopeptidase; 98.8 1E-08 3.4E-13 88.1 9.2 101 1-103 168-288 (741)
175 2oiz_A Aromatic amine dehydrog 98.8 9.2E-09 3.1E-13 81.5 8.3 89 1-93 55-161 (361)
176 3pe7_A Oligogalacturonate lyas 98.8 3.4E-08 1.2E-12 76.9 11.1 100 1-102 86-208 (388)
177 3c5m_A Oligogalacturonate lyas 98.8 3.3E-08 1.1E-12 76.7 9.0 69 1-75 41-112 (396)
178 2dg1_A DRP35, lactonase; beta 98.8 1E-07 3.5E-12 73.0 11.7 94 1-102 50-154 (333)
179 3fvz_A Peptidyl-glycine alpha- 98.8 6.2E-08 2.1E-12 75.2 10.5 99 1-107 29-169 (329)
180 1q7f_A NHL, brain tumor CG1071 98.8 1.1E-07 3.7E-12 71.5 11.4 97 1-106 126-231 (286)
181 3e5z_A Putative gluconolactona 98.7 1.1E-07 3.6E-12 72.1 10.9 93 1-101 33-133 (296)
182 2gop_A Trilobed protease; beta 98.7 4.8E-08 1.6E-12 75.0 8.9 93 6-103 23-124 (347)
183 3e5z_A Putative gluconolactona 98.7 3.5E-08 1.2E-12 74.8 7.5 101 1-111 177-285 (296)
184 3no2_A Uncharacterized protein 98.7 1.1E-07 3.8E-12 73.0 10.0 88 5-102 3-96 (276)
185 2xdw_A Prolyl endopeptidase; a 98.6 2.4E-07 8.2E-12 78.9 11.5 98 1-102 176-305 (710)
186 3fvz_A Peptidyl-glycine alpha- 98.6 1E-07 3.5E-12 74.0 7.5 104 1-107 201-316 (329)
187 1xip_A Nucleoporin NUP159; bet 98.6 3.6E-07 1.2E-11 74.3 10.7 79 10-100 139-231 (388)
188 2dg1_A DRP35, lactonase; beta 98.6 3.9E-07 1.3E-11 69.7 10.3 94 1-101 187-298 (333)
189 3iuj_A Prolyl endopeptidase; h 98.6 1.1E-07 3.7E-12 81.3 7.7 97 1-98 134-249 (693)
190 1qks_A Cytochrome CD1 nitrite 98.5 7.1E-07 2.4E-11 75.5 11.4 88 9-103 168-264 (567)
191 2bkl_A Prolyl endopeptidase; m 98.5 4.8E-07 1.6E-11 77.0 10.2 94 1-99 173-287 (695)
192 1rwi_B Serine/threonine-protei 98.5 9.6E-07 3.3E-11 65.3 10.3 99 1-107 155-258 (270)
193 1xip_A Nucleoporin NUP159; bet 98.5 3.1E-07 1.1E-11 74.6 8.1 90 1-107 93-185 (388)
194 1qks_A Cytochrome CD1 nitrite 98.5 2E-06 6.9E-11 72.7 13.2 98 1-105 202-321 (567)
195 2ghs_A AGR_C_1268P; regucalcin 98.4 5.6E-06 1.9E-10 64.2 13.8 92 1-99 184-288 (326)
196 2mad_H Methylamine dehydrogena 98.4 4.2E-06 1.4E-10 66.9 12.4 76 1-81 71-165 (373)
197 3g4e_A Regucalcin; six bladed 98.4 5E-06 1.7E-10 63.4 12.2 93 1-100 154-259 (297)
198 3dr2_A Exported gluconolactona 98.4 4.7E-06 1.6E-10 63.7 11.9 91 2-99 51-147 (305)
199 3no2_A Uncharacterized protein 98.4 1.2E-06 4.2E-11 67.1 8.4 96 2-107 43-149 (276)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 98.4 3.5E-06 1.2E-10 63.5 10.5 97 1-104 177-290 (314)
201 3sjl_D Methylamine dehydrogena 98.3 1.4E-06 4.7E-11 70.8 7.9 102 1-106 83-212 (386)
202 2xe4_A Oligopeptidase B; hydro 98.3 1.9E-06 6.3E-11 74.7 8.6 98 2-101 180-289 (751)
203 1yr2_A Prolyl oligopeptidase; 98.3 6.6E-06 2.3E-10 70.5 11.9 100 1-103 214-336 (741)
204 1rwi_B Serine/threonine-protei 98.3 4.1E-06 1.4E-10 61.9 9.0 97 1-106 29-131 (270)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 98.3 5.9E-06 2E-10 62.2 9.7 94 1-103 23-137 (314)
206 3dsm_A Uncharacterized protein 98.3 8.1E-06 2.8E-10 63.4 10.6 90 1-100 177-285 (328)
207 3dr2_A Exported gluconolactona 98.2 2.7E-06 9.1E-11 65.1 7.0 95 1-103 193-297 (305)
208 3g4e_A Regucalcin; six bladed 98.2 4.6E-05 1.6E-09 58.0 13.7 90 2-100 19-115 (297)
209 2mad_H Methylamine dehydrogena 98.2 2.2E-05 7.6E-10 62.6 11.3 99 3-101 28-143 (373)
210 2ghs_A AGR_C_1268P; regucalcin 98.1 2.2E-05 7.4E-10 60.9 10.8 91 2-101 55-152 (326)
211 2z2n_A Virginiamycin B lyase; 98.1 7E-05 2.4E-09 55.5 12.3 96 1-105 20-121 (299)
212 2z2n_A Virginiamycin B lyase; 98.0 7.6E-05 2.6E-09 55.3 11.4 97 1-107 188-290 (299)
213 1fwx_A Nitrous oxide reductase 98.0 5.1E-05 1.7E-09 64.7 11.3 93 1-100 282-405 (595)
214 3sjl_D Methylamine dehydrogena 98.0 1.1E-05 3.9E-10 65.4 6.8 98 3-101 40-155 (386)
215 3dsm_A Uncharacterized protein 98.0 5.4E-05 1.9E-09 58.6 10.0 97 6-102 139-244 (328)
216 2qe8_A Uncharacterized protein 97.9 4E-05 1.4E-09 59.7 8.4 99 1-106 200-314 (343)
217 3hrp_A Uncharacterized protein 97.9 0.00018 6.1E-09 57.9 12.1 101 1-108 272-405 (409)
218 3c75_H MADH, methylamine dehyd 97.9 1.9E-05 6.6E-10 64.7 6.5 101 1-105 123-250 (426)
219 3hrp_A Uncharacterized protein 97.9 3.8E-05 1.3E-09 61.9 7.9 90 1-99 136-236 (409)
220 2qe8_A Uncharacterized protein 97.8 0.00021 7.3E-09 55.5 11.1 99 1-103 72-215 (343)
221 2qc5_A Streptogramin B lactona 97.8 0.00055 1.9E-08 50.6 12.5 95 1-104 25-125 (300)
222 1mda_H Methylamine dehydrogena 97.8 8.9E-05 3.1E-09 59.5 8.6 87 2-92 270-366 (368)
223 2qc5_A Streptogramin B lactona 97.8 0.00061 2.1E-08 50.3 12.3 96 1-105 67-168 (300)
224 3iuj_A Prolyl endopeptidase; h 97.7 0.00034 1.2E-08 59.6 11.9 94 1-98 180-295 (693)
225 3c75_H MADH, methylamine dehyd 97.7 9.7E-05 3.3E-09 60.5 7.9 75 1-80 324-409 (426)
226 2ece_A 462AA long hypothetical 97.7 0.00041 1.4E-08 57.5 11.5 100 2-101 194-339 (462)
227 2iwa_A Glutamine cyclotransfer 97.5 0.0011 3.9E-08 51.0 10.6 94 2-104 111-228 (266)
228 2xe4_A Oligopeptidase B; hydro 97.5 0.0011 3.7E-08 57.3 11.2 71 1-74 226-304 (751)
229 1mda_H Methylamine dehydrogena 97.4 0.00046 1.6E-08 55.4 7.4 81 20-101 47-142 (368)
230 1fwx_A Nitrous oxide reductase 97.4 0.00087 3E-08 57.2 9.3 101 1-106 200-354 (595)
231 3nol_A Glutamine cyclotransfer 97.3 0.003 1E-07 48.7 10.9 91 2-101 131-243 (262)
232 2ece_A 462AA long hypothetical 97.2 0.006 2E-07 50.6 12.4 96 4-101 90-206 (462)
233 2fp8_A Strictosidine synthase; 97.1 0.0039 1.3E-07 47.6 10.1 100 1-104 190-304 (322)
234 3nok_A Glutaminyl cyclase; bet 97.1 0.0047 1.6E-07 47.8 10.3 90 2-100 140-252 (268)
235 1npe_A Nidogen, entactin; glyc 97.1 0.02 6.8E-07 42.3 13.4 94 1-100 41-140 (267)
236 2p4o_A Hypothetical protein; p 97.0 0.0086 3E-07 45.5 10.6 90 4-100 175-275 (306)
237 1kb0_A Quinohemoprotein alcoho 96.9 0.0024 8.3E-08 54.6 8.0 75 19-99 457-536 (677)
238 3mbr_X Glutamine cyclotransfer 96.9 0.014 4.8E-07 44.4 11.3 91 2-101 109-222 (243)
239 2p4o_A Hypothetical protein; p 96.9 0.024 8.1E-07 43.0 12.6 54 1-56 37-90 (306)
240 1yiq_A Quinohemoprotein alcoho 96.9 0.0034 1.2E-07 53.8 8.3 75 19-99 455-534 (689)
241 2ism_A Putative oxidoreductase 96.9 0.012 4E-07 46.3 10.7 98 1-102 36-154 (352)
242 1npe_A Nidogen, entactin; glyc 96.8 0.064 2.2E-06 39.5 13.9 102 1-106 84-191 (267)
243 3a9g_A Putative uncharacterize 96.7 0.013 4.4E-07 46.2 10.1 96 1-103 34-155 (354)
244 2iwa_A Glutamine cyclotransfer 96.7 0.007 2.4E-07 46.5 8.1 94 3-104 71-172 (266)
245 2hz6_A Endoplasmic reticulum t 96.7 0.0016 5.6E-08 51.3 4.5 66 6-79 8-74 (369)
246 3qqz_A Putative uncharacterize 96.6 0.022 7.6E-07 43.4 10.3 95 1-103 32-141 (255)
247 2fp8_A Strictosidine synthase; 96.6 0.044 1.5E-06 41.6 12.0 95 1-101 131-247 (322)
248 1kb0_A Quinohemoprotein alcoho 96.4 0.0049 1.7E-07 52.8 6.2 101 5-107 322-501 (677)
249 2hz6_A Endoplasmic reticulum t 96.4 0.002 6.7E-08 50.9 3.3 87 2-96 125-217 (369)
250 2xbg_A YCF48-like protein; pho 96.3 0.069 2.4E-06 41.2 11.9 91 1-101 168-268 (327)
251 3nol_A Glutamine cyclotransfer 96.2 0.021 7.2E-07 43.9 8.1 92 3-103 92-191 (262)
252 3das_A Putative oxidoreductase 96.1 0.04 1.4E-06 43.8 9.6 98 1-104 37-161 (347)
253 3pbp_A Nucleoporin NUP82; beta 95.9 0.043 1.5E-06 45.3 9.1 89 2-99 72-196 (452)
254 3nok_A Glutaminyl cyclase; bet 95.9 0.052 1.8E-06 41.8 9.0 93 3-105 101-202 (268)
255 3tc9_A Hypothetical hydrolase; 95.9 0.045 1.6E-06 44.1 9.0 98 1-107 184-295 (430)
256 3tc9_A Hypothetical hydrolase; 95.8 0.064 2.2E-06 43.3 9.8 67 1-74 231-301 (430)
257 1cru_A Protein (soluble quinop 95.8 0.11 3.8E-06 42.4 11.0 101 1-103 32-164 (454)
258 3sbq_A Nitrous-oxide reductase 95.7 0.054 1.8E-06 46.3 9.0 92 2-100 329-452 (638)
259 3mbr_X Glutamine cyclotransfer 95.6 0.11 3.6E-06 39.5 9.6 87 4-100 71-166 (243)
260 2p9w_A MAL S 1 allergenic prot 95.4 0.076 2.6E-06 42.2 8.5 95 4-104 74-206 (334)
261 3qqz_A Putative uncharacterize 95.4 0.21 7.2E-06 37.9 10.6 96 1-102 126-243 (255)
262 2g8s_A Glucose/sorbosone dehyd 95.3 0.067 2.3E-06 41.9 8.0 97 1-102 23-149 (353)
263 4hw6_A Hypothetical protein, I 95.0 0.28 9.5E-06 39.6 11.0 66 1-73 233-303 (433)
264 4hw6_A Hypothetical protein, I 94.8 0.4 1.4E-05 38.7 11.4 100 1-107 278-427 (433)
265 1yiq_A Quinohemoprotein alcoho 94.7 0.053 1.8E-06 46.4 6.1 97 9-107 321-499 (689)
266 3sre_A PON1, serum paraoxonase 94.7 0.65 2.2E-05 36.9 12.1 93 2-100 171-284 (355)
267 2xbg_A YCF48-like protein; pho 94.7 0.32 1.1E-05 37.3 10.1 94 2-107 211-316 (327)
268 1k3i_A Galactose oxidase precu 94.6 0.34 1.2E-05 40.8 10.8 95 2-101 192-305 (656)
269 3a9g_A Putative uncharacterize 94.4 0.22 7.5E-06 39.1 8.7 62 39-100 136-215 (354)
270 1tl2_A L10, protein (tachylect 94.4 0.34 1.2E-05 36.6 9.2 93 1-107 46-157 (236)
271 1ijq_A LDL receptor, low-densi 94.2 1.2 3.9E-05 34.0 12.3 91 1-97 35-134 (316)
272 2ad6_A Methanol dehydrogenase 94.2 0.15 5.2E-06 42.6 7.8 77 18-100 443-524 (571)
273 3v64_C Agrin; beta propeller, 94.1 1.4 4.7E-05 34.2 12.7 99 2-106 122-227 (349)
274 1ijq_A LDL receptor, low-densi 94.1 1.4 4.9E-05 33.4 13.8 97 2-103 83-185 (316)
275 2p9w_A MAL S 1 allergenic prot 94.0 0.68 2.3E-05 36.7 10.7 101 2-103 19-157 (334)
276 3kya_A Putative phosphatase; s 93.7 0.19 6.6E-06 41.8 7.4 68 1-74 252-341 (496)
277 3hxj_A Pyrrolo-quinoline quino 93.7 0.38 1.3E-05 35.7 8.5 94 2-107 221-318 (330)
278 2wg3_C Hedgehog-interacting pr 93.6 0.85 2.9E-05 37.4 11.0 102 1-104 19-160 (463)
279 3v65_B Low-density lipoprotein 93.4 2 6.7E-05 33.8 12.6 99 2-106 165-270 (386)
280 3sre_A PON1, serum paraoxonase 93.4 0.24 8.3E-06 39.4 7.2 55 1-56 226-285 (355)
281 3v65_B Low-density lipoprotein 93.0 1.9 6.5E-05 33.8 12.0 92 1-98 121-217 (386)
282 2ism_A Putative oxidoreductase 93.0 0.51 1.7E-05 36.8 8.4 99 1-100 80-220 (352)
283 1flg_A Protein (quinoprotein e 92.9 0.23 7.7E-06 41.8 6.7 76 18-99 465-545 (582)
284 3v64_C Agrin; beta propeller, 92.9 2.5 8.7E-05 32.6 13.1 95 1-101 78-178 (349)
285 1cru_A Protein (soluble quinop 92.8 1.1 3.6E-05 36.5 10.4 63 38-100 144-245 (454)
286 3amr_A 3-phytase; beta-propell 92.8 1.9 6.6E-05 34.3 11.6 91 4-102 138-251 (355)
287 3pbp_A Nucleoporin NUP82; beta 92.6 0.5 1.7E-05 38.9 8.1 93 5-107 30-152 (452)
288 3p5b_L Low density lipoprotein 92.6 3.1 0.00011 32.8 13.0 94 1-100 117-220 (400)
289 3kya_A Putative phosphatase; s 92.5 0.68 2.3E-05 38.5 8.9 97 4-108 201-336 (496)
290 3sov_A LRP-6, low-density lipo 92.4 2.3 7.9E-05 32.6 11.4 100 2-106 85-190 (318)
291 3hxj_A Pyrrolo-quinoline quino 91.8 0.62 2.1E-05 34.5 7.4 83 8-100 108-194 (330)
292 2ad6_A Methanol dehydrogenase 91.6 0.43 1.5E-05 39.9 6.8 29 5-35 311-342 (571)
293 3sov_A LRP-6, low-density lipo 91.0 4.2 0.00014 31.1 12.0 92 2-99 41-139 (318)
294 3s25_A Hypothetical 7-bladed b 90.7 1.3 4.6E-05 33.9 8.4 86 2-98 110-199 (302)
295 1kv9_A Type II quinohemoprotei 90.6 0.92 3.1E-05 38.5 8.0 75 18-98 437-516 (668)
296 3das_A Putative oxidoreductase 90.4 2.9 9.8E-05 33.0 10.2 63 38-100 140-219 (347)
297 3s25_A Hypothetical 7-bladed b 89.7 0.84 2.9E-05 35.1 6.5 90 2-98 59-160 (302)
298 3zwu_A Alkaline phosphatase PH 89.4 1.1 3.7E-05 38.2 7.4 57 1-57 481-550 (592)
299 3m0c_C LDL receptor, low-densi 89.3 6.2 0.00021 34.5 12.3 94 1-100 429-532 (791)
300 4a2l_A BT_4663, two-component 88.5 7.9 0.00027 33.0 12.3 89 4-101 365-470 (795)
301 2g8s_A Glucose/sorbosone dehyd 88.3 1.7 5.8E-05 33.8 7.4 60 40-99 132-214 (353)
302 3s94_A LRP-6, low-density lipo 88.2 7.6 0.00026 32.7 11.9 93 1-99 45-144 (619)
303 1w6s_A Methanol dehydrogenase 88.1 1.8 6.1E-05 36.6 7.8 75 18-98 452-531 (599)
304 1flg_A Protein (quinoprotein e 87.6 1.3 4.4E-05 37.1 6.7 29 5-35 331-362 (582)
305 4a2l_A BT_4663, two-component 86.8 14 0.00047 31.4 13.6 88 4-101 414-516 (795)
306 3m0c_C LDL receptor, low-densi 86.6 16 0.00053 31.9 13.5 93 1-98 476-573 (791)
307 1n7d_A LDL receptor, low-densi 85.2 1.1 3.7E-05 38.4 5.1 94 1-100 411-514 (699)
308 1n7d_A LDL receptor, low-densi 84.8 0.67 2.3E-05 39.7 3.6 98 2-104 459-562 (699)
309 3q7m_A Lipoprotein YFGL, BAMB; 84.8 5.6 0.00019 30.1 8.6 64 6-78 52-127 (376)
310 1k3i_A Galactose oxidase precu 84.0 3.5 0.00012 34.5 7.6 71 2-73 249-322 (656)
311 3amr_A 3-phytase; beta-propell 82.8 16 0.00055 29.0 10.6 91 10-106 88-203 (355)
312 4a9v_A PHOX; hydrolase, beta-p 82.8 4.3 0.00015 34.6 7.5 58 1-58 481-551 (592)
313 2xzh_A Clathrin heavy chain 1; 82.5 17 0.00059 29.0 13.3 87 3-100 74-169 (365)
314 4gq2_M Nucleoporin NUP120; bet 82.4 5.3 0.00018 35.5 8.4 32 2-35 242-273 (950)
315 1kv9_A Type II quinohemoprotei 82.2 5.3 0.00018 33.8 8.1 70 2-79 236-339 (668)
316 3p5b_L Low density lipoprotein 81.7 17 0.00058 28.5 13.7 92 2-98 165-261 (400)
317 1bpo_A Protein (clathrin); cla 81.3 22 0.00076 29.5 11.1 86 3-99 73-167 (494)
318 3v9f_A Two-component system se 80.5 21 0.00072 30.2 11.2 90 4-105 458-560 (781)
319 3v9f_A Two-component system se 79.4 26 0.00088 29.7 11.4 86 5-100 372-467 (781)
320 3q7m_A Lipoprotein YFGL, BAMB; 79.0 18 0.00062 27.2 10.2 64 7-80 239-303 (376)
321 1w6s_A Methanol dehydrogenase 78.8 6.2 0.00021 33.2 7.3 29 5-35 318-349 (599)
322 4a0p_A LRP6, LRP-6, low-densit 77.4 31 0.0011 29.0 13.2 94 1-100 42-141 (628)
323 4fhn_B Nucleoporin NUP120; pro 76.2 4.2 0.00014 36.8 5.8 31 2-34 244-274 (1139)
324 4a0p_A LRP6, LRP-6, low-densit 73.5 40 0.0014 28.3 12.9 93 2-100 346-450 (628)
325 1tl2_A L10, protein (tachylect 72.5 17 0.00059 27.3 7.5 51 1-55 93-152 (236)
326 3sbq_A Nitrous-oxide reductase 69.7 10 0.00036 32.4 6.3 74 39-117 324-413 (638)
327 3s94_A LRP-6, low-density lipo 69.5 49 0.0017 27.7 12.8 93 2-100 355-453 (619)
328 3f7f_A Nucleoporin NUP120; nuc 66.0 9.7 0.00033 33.2 5.6 30 4-35 228-257 (729)
329 3zwu_A Alkaline phosphatase PH 65.2 16 0.00056 30.9 6.7 61 40-100 478-548 (592)
330 4gq2_M Nucleoporin NUP120; bet 62.2 11 0.00038 33.5 5.4 35 39-79 237-272 (950)
331 2wg3_C Hedgehog-interacting pr 52.4 91 0.0031 25.2 11.3 20 38-57 139-158 (463)
332 4fhn_B Nucleoporin NUP120; pro 50.7 10 0.00034 34.3 3.2 34 40-79 240-274 (1139)
333 1bpo_A Protein (clathrin); cla 49.2 1.1E+02 0.0039 25.3 10.3 59 4-77 267-325 (494)
334 4a9v_A PHOX; hydrolase, beta-p 46.1 76 0.0026 26.9 7.6 62 39-100 477-548 (592)
335 4h3o_A Lectin; cadmium, plant 42.6 53 0.0018 20.8 5.0 68 17-99 27-98 (105)
336 2xzh_A Clathrin heavy chain 1; 40.7 1.4E+02 0.0047 23.8 8.0 19 17-35 279-297 (365)
337 3ei3_A DNA damage-binding prot 39.0 1.3E+02 0.0045 27.3 8.6 51 19-74 532-591 (1158)
338 1xi4_A Clathrin heavy chain; a 38.1 1.2E+02 0.0041 29.0 8.1 86 3-99 73-167 (1630)
339 4hvt_A Ritya.17583.B, post-pro 37.5 20 0.00069 30.8 2.9 32 2-33 136-170 (711)
340 2vpj_A Kelch-like protein 12; 34.9 1.2E+02 0.0042 21.7 7.6 97 5-104 158-264 (301)
341 3s9j_A Member of DUF4221 famil 34.8 1.7E+02 0.0056 23.0 7.9 69 5-80 37-116 (369)
342 1b2p_A Protein (lectin); manno 33.0 98 0.0034 19.9 8.4 78 4-98 27-107 (119)
343 3ii7_A Kelch-like protein 7; p 32.9 1.4E+02 0.0047 21.5 7.7 97 5-103 54-159 (306)
344 3f7f_A Nucleoporin NUP120; nuc 32.0 72 0.0024 27.8 5.4 27 47-79 229-256 (729)
345 3q6k_A 43.2 kDa salivary prote 31.1 2E+02 0.0067 22.8 10.3 73 20-97 124-238 (381)
346 2uvk_A YJHT; unknown function, 28.3 1.4E+02 0.0047 22.1 6.0 97 6-105 19-130 (357)
347 2woz_A Kelch repeat and BTB do 27.7 1.7E+02 0.0059 21.2 6.4 98 6-103 109-216 (318)
348 1zso_A Hypothetical protein; s 26.7 1.4E+02 0.0048 20.8 5.4 27 30-56 102-128 (164)
349 1zgk_A Kelch-like ECH-associat 21.1 2.4E+02 0.0081 20.3 7.2 96 6-104 168-273 (308)
350 1eej_A Thiol:disulfide interch 21.0 48 0.0016 23.5 2.0 15 42-56 36-50 (216)
351 4asc_A Kelch repeat and BTB do 20.2 2.5E+02 0.0086 20.2 6.8 98 6-103 98-206 (315)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.81 E-value=2.1e-19 Score=138.65 Aligned_cols=99 Identities=10% Similarity=0.183 Sum_probs=88.2
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l 77 (143)
++|||||++|++++ .||+|++||+.+++.+..+. ...+.+++|+|+|++|++|+ .|+.|++||+. |+++
T Consensus 19 ~~fsp~~~~l~s~~--~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s------~d~~i~vwd~~~~~~~ 90 (304)
T 2ynn_A 19 IDFHPTEPWVLTTL--YSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS------DDFRIRVFNYNTGEKV 90 (304)
T ss_dssp EEECSSSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE------TTSEEEEEETTTCCEE
T ss_pred EEECCCCCEEEEEc--CCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEEC------CCCEEEEEECCCCcEE
Confidence 57999999999999 69999999999988777653 35799999999999999999 69999999994 7777
Q ss_pred Eec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 78 KRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 78 ~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
..+ |...|.+++|+|+++.|+|++.|++|+
T Consensus 91 ~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~ 122 (304)
T 2ynn_A 91 VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVK 122 (304)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred EEEeCCCCcEEEEEEcCCCCEEEEECCCCeEE
Confidence 654 577899999999999999999999886
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.81 E-value=2.4e-19 Score=140.05 Aligned_cols=99 Identities=13% Similarity=0.245 Sum_probs=87.3
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l 77 (143)
++|+|||++|++++ .||+|++||+.+++++.++. ...|.+++|+|||++|++++ .|+.++|||+. ++++
T Consensus 212 l~~spd~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s------~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 212 LTFSPDSQLLVTAS--DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS------SDKSVKVWDVGTRTCV 283 (321)
T ss_dssp EEECTTSCEEEEEC--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE------TTSCEEEEETTTTEEE
T ss_pred EEEcCCCCEEEEEc--CCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEe------CCCcEEEEeCCCCEEE
Confidence 47999999999999 69999999999888776653 35799999999999999999 69999999995 7777
Q ss_pred Eec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 78 KRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 78 ~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
..+ +...|++++|+|+++.|++++.|++|+
T Consensus 284 ~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~ 315 (321)
T 3ow8_A 284 HTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIH 315 (321)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTCCEE
T ss_pred EEEcCCCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 765 467899999999999999999998875
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.81 E-value=1.7e-19 Score=148.16 Aligned_cols=98 Identities=15% Similarity=0.321 Sum_probs=86.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 78 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~ 78 (143)
|+|||||++||+|+ .||+|+|||. +++++.++ |...|++++|||||++||+++ .|+.|+|||.+|+++.
T Consensus 22 ~a~spdg~~las~~--~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~------~d~~i~vWd~~~~~~~ 92 (577)
T 2ymu_A 22 VAFSPDGQTIASAS--DDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASAS------DDKTVKLWNRNGQLLQ 92 (577)
T ss_dssp EEECTTSSCEEEEE--TTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEE------TTSCEEEEETTSCEEE
T ss_pred EEECCCCCEEEEEe--CCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEe------CCCEEEEEECCCCEEE
Confidence 58999999999999 6999999996 45666655 335799999999999999999 6999999999999887
Q ss_pred ec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 79 RF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.. +...|.+++|+|+++.|++++.|+.++
T Consensus 93 ~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~ 123 (577)
T 2ymu_A 93 TLTGHSSSVRGVAFSPDGQTIASASDDKTVK 123 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEECCCCCEEEEEECCCCCEEEEEcCCCcee
Confidence 65 467899999999999999999998775
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.80 E-value=4.4e-19 Score=138.56 Aligned_cols=99 Identities=10% Similarity=0.201 Sum_probs=87.6
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l 77 (143)
++|||||++||+++ .||.|++||+.+++++..+. ...|++++|+|||++|++++ .|+.|+|||+. ++++
T Consensus 170 ~~~spdg~~lasg~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s------~dg~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 170 IAYSPDGKYLASGA--IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS------DDGYIKIYDVQHANLA 241 (321)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEEC------TTSCEEEEETTTCCEE
T ss_pred EEECCCCCEEEEEc--CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEc------CCCeEEEEECCCccee
Confidence 47999999999999 69999999999998887764 35799999999999999999 69999999995 6666
Q ss_pred Eec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 78 KRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 78 ~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
... +...|.+++|+|+++.|++++.|++|+
T Consensus 242 ~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~ 273 (321)
T 3ow8_A 242 GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVK 273 (321)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEcCCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 554 467899999999999999999999886
No 5
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.80 E-value=4.3e-19 Score=145.76 Aligned_cols=98 Identities=15% Similarity=0.328 Sum_probs=85.7
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 78 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~ 78 (143)
++|||||++||+++ .|++|++||.. ++++..+ +...|++++|||||++||+++ .|+.|++||.+|+++.
T Consensus 473 ~~~spd~~~las~~--~d~~i~iw~~~-~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~------~dg~v~lwd~~~~~~~ 543 (577)
T 2ymu_A 473 VAFSPDGQTIASAS--DDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASAS------DDKTVKLWNRNGQLLQ 543 (577)
T ss_dssp EEECTTSCEEEEEE--TTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTSSCEEEEE------TTSEEEEECTTSCEEE
T ss_pred EEEcCCCCEEEEEe--CCCEEEEEcCC-CCEEEEEeCCCCCEEEEEEcCCCCEEEEEE------CcCEEEEEeCCCCEEE
Confidence 47999999999999 69999999964 5665554 346799999999999999999 6999999999999887
Q ss_pred ec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 79 RF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.. |...|.+++|+|||+.|+|++.|++|+
T Consensus 544 ~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~ 574 (577)
T 2ymu_A 544 TLTGHSSSVWGVAFSPDGQTIASASSDKTVK 574 (577)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred EEcCCCCCEEEEEEcCCCCEEEEEeCCCEEE
Confidence 65 578999999999999999999998774
No 6
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.79 E-value=5.4e-19 Score=140.45 Aligned_cols=99 Identities=14% Similarity=0.145 Sum_probs=82.4
Q ss_pred CeEecCCCEEEEEecCCCC----eEEEEECCCceE----Eeee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTG----SLEFVDTGDFSV----MNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQW 70 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg----~i~iWd~~~~~~----~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW 70 (143)
++|||||++|++++. |+ .+++||+..... ...+ +...|++++|||||++||+|+ .|+.|+||
T Consensus 225 v~fspdg~~l~~~s~--d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs------~D~~V~iw 296 (365)
T 4h5i_A 225 INFIADDTVLIAASL--KKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLAS------NDNSIALV 296 (365)
T ss_dssp EEEEETTEEEEEEEE--SSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEE------TTSCEEEE
T ss_pred EEEcCCCCEEEEEec--CCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEc------CCCEEEEE
Confidence 479999999999984 44 688899775432 1222 235799999999999999999 69999999
Q ss_pred ee-cCcEEEec---cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 71 SF-QGKIIKRF---NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 71 ~~-~g~~l~~~---~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
|+ +|+++... |...|++++|+|||++|+|+|.|++||
T Consensus 297 d~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvr 337 (365)
T 4h5i_A 297 KLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIH 337 (365)
T ss_dssp ETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred ECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 99 57877653 467899999999999999999999988
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.79 E-value=1.2e-18 Score=136.31 Aligned_cols=99 Identities=13% Similarity=0.156 Sum_probs=86.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeecc----CceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH----HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGK 75 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~----~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~ 75 (143)
++|+|+|++|++|+ .||+|++||+.+++.+..+.+ ..+++++|+|+|++|++|+ .|+.+++||. .++
T Consensus 232 v~~~p~~~~l~s~s--~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~------~d~~i~vwd~~~~~ 303 (340)
T 1got_B 232 ICFFPNGNAFATGS--DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGY------DDFNCNVWDALKAD 303 (340)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE------TTSEEEEEETTTCC
T ss_pred EEEcCCCCEEEEEc--CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEEC------CCCeEEEEEcccCc
Confidence 47999999999999 699999999998887766533 2699999999999999999 6999999998 466
Q ss_pred EEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 76 IIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 76 ~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.+... |...|.+++|+|+|..|+|++.|++|+
T Consensus 304 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~ 337 (340)
T 1got_B 304 RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337 (340)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred EeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEE
Confidence 66554 577999999999999999999998874
No 8
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.78 E-value=1.1e-18 Score=136.99 Aligned_cols=99 Identities=15% Similarity=0.269 Sum_probs=82.9
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEe-----eeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMN-----AAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGK 75 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~-----~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~ 75 (143)
++|||||++||+|+ .||+|+|||+.+++.+. ..|...|++++|+|||++||+|+ .|+.++||++...
T Consensus 22 l~~sp~g~~las~~--~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s------~D~~v~iw~~~~~ 93 (345)
T 3fm0_A 22 LAWNPAGTLLASCG--GDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS------FDATTCIWKKNQD 93 (345)
T ss_dssp EEECTTSSCEEEEE--TTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE------TTSCEEEEEECCC
T ss_pred EEECCCCCEEEEEc--CCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEE------CCCcEEEEEccCC
Confidence 58999999999999 69999999988765322 12335799999999999999999 6999999999532
Q ss_pred ---EEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 76 ---IIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 76 ---~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
++... +...|.+++|+|+++.|++++.|++|+
T Consensus 94 ~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~ 130 (345)
T 3fm0_A 94 DFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVW 130 (345)
T ss_dssp -EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEE
Confidence 34443 467899999999999999999999886
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.78 E-value=1.1e-18 Score=138.67 Aligned_cols=99 Identities=14% Similarity=0.253 Sum_probs=84.8
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeecc---------CceEEEEECCCCCEEEEeecCcceecCCcEEEEe
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH---------HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWS 71 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~---------~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~ 71 (143)
++|+|+|++|++|+ .||+|++||+.+++.+..+.. ..+++++|+|+|++|++|+ .|+.+++||
T Consensus 255 v~~~p~~~~l~s~s--~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~------~dg~i~vwd 326 (380)
T 3iz6_a 255 VKFFPDGQRFGTGS--DDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY------SNGDCYVWD 326 (380)
T ss_dssp EEECTTSSEEEEEC--SSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC------TTSCEEEEE
T ss_pred EEEecCCCeEEEEc--CCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEE------CCCCEEEEE
Confidence 57999999999999 699999999999887765421 1388999999999999999 599999999
Q ss_pred e-cCcEEEec------cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 72 F-QGKIIKRF------NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 72 ~-~g~~l~~~------~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
. .++.+... |...|.+++|+|+|+.|+|++.|++|+
T Consensus 327 ~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~ 369 (380)
T 3iz6_a 327 TLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLK 369 (380)
T ss_dssp TTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEE
T ss_pred CCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEE
Confidence 8 46665543 456899999999999999999999885
No 10
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.77 E-value=4.6e-18 Score=134.24 Aligned_cols=99 Identities=15% Similarity=0.256 Sum_probs=85.8
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeecc----CceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH----HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGK 75 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~----~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~ 75 (143)
++|+|+|++|++++ .||+|++||+.+.+.+..+.. ..+++++|+|+|++|++++ .|+.|++||+ +|+
T Consensus 246 v~~~p~~~~l~s~s--~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~------~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 246 VRYYPSGDAFASGS--DDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGY------NDYTINVWDVLKGS 317 (354)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE------TTSCEEEEETTTCS
T ss_pred EEEeCCCCEEEEEe--CCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEE------CCCcEEEEECCCCc
Confidence 47999999999999 699999999998776654432 3689999999999999999 6999999999 577
Q ss_pred EEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 76 IIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 76 ~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.+... |.+.|.+++|+|+|+.|+|++.|++|+
T Consensus 318 ~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~ 351 (354)
T 2pbi_B 318 RVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLR 351 (354)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred eEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEE
Confidence 77654 577999999999999999999998774
No 11
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.76 E-value=5.9e-18 Score=130.54 Aligned_cols=99 Identities=17% Similarity=0.223 Sum_probs=85.0
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l 77 (143)
++|+|+|++|++|+ .||+|++||+.+++++..+. ...|++++|+|+|++|++|+ .|+.|++||+. +..+
T Consensus 61 ~~~~~~~~~l~s~s--~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs------~D~~v~lWd~~~~~~~ 132 (304)
T 2ynn_A 61 GKFIARKNWIIVGS--DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS------DDLTVKLWNWENNWAL 132 (304)
T ss_dssp EEEEGGGTEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE------TTSCEEEEEGGGTTEE
T ss_pred EEEeCCCCEEEEEC--CCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEEC------CCCeEEEEECCCCcch
Confidence 47999999999999 69999999999988877653 35799999999999999999 69999999995 5343
Q ss_pred -Ee--ccCCcEEEEEEee-CCCeeeecCchhhHH
Q psy5876 78 -KR--FNSPTFCQLRWRP-RPASLLSKEQVDKIK 107 (143)
Q Consensus 78 -~~--~~~~~v~~l~wsP-~~~~l~s~s~d~~i~ 107 (143)
.. .+...|.+++|+| ++..|++++.|++|+
T Consensus 133 ~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~ 166 (304)
T 2ynn_A 133 EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (304)
T ss_dssp EEEECCCCSCEEEEEECTTCTTEEEEEETTSEEE
T ss_pred hhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEE
Confidence 33 3567899999999 678999999999887
No 12
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.76 E-value=3.5e-18 Score=135.39 Aligned_cols=99 Identities=14% Similarity=0.229 Sum_probs=79.3
Q ss_pred CeEecC-CCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCC-CEEEEeecCcceecCCcEEEEeec-Cc
Q psy5876 1 MKLRMR-GTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTG-RYVMSGVSLWKTKADTGYWQWSFQ-GK 75 (143)
Q Consensus 1 i~~SPd-G~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG-~~lat~s~~~~~~~D~~i~iW~~~-g~ 75 (143)
++|+|+ +++||+|+ .||+|++||+.+++++.++. ...|++++|+||| ++||+|+ .|+.|+|||.. |+
T Consensus 220 ~~~~p~~~~~l~sg~--~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs------~D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 220 LAWHPQQSEVFVFGD--ENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLS------EDCSLAVLDSSLSE 291 (344)
T ss_dssp EEECSSCTTEEEEEE--TTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEE------TTSCEEEECTTCCE
T ss_pred eeecCCCCcceEEec--cCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEe------CCCeEEEEECCCCc
Confidence 478985 56788888 69999999999988776653 3579999999998 5899999 69999999996 44
Q ss_pred EEEe-ccCCcEEEEEEeeCCCe-eeecCchhhHH
Q psy5876 76 IIKR-FNSPTFCQLRWRPRPAS-LLSKEQVDKIK 107 (143)
Q Consensus 76 ~l~~-~~~~~v~~l~wsP~~~~-l~s~s~d~~i~ 107 (143)
++.. .|.+.|++++|+|+++. |+|++.|++|+
T Consensus 292 ~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~ 325 (344)
T 4gqb_B 292 LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVV 325 (344)
T ss_dssp EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEE
Confidence 4433 35778999999999986 55899999885
No 13
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.76 E-value=3.7e-18 Score=143.58 Aligned_cols=99 Identities=11% Similarity=0.233 Sum_probs=83.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceE--Eee-eccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec--Cc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSV--MNA-AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ--GK 75 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~--~~~-~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~--g~ 75 (143)
++|||||++||+|+ .||+|++||+.+++. +.. .+...|++++|||||++||+++ .|+.+++|++. ++
T Consensus 454 va~spdg~~lasgs--~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s------~d~~v~~w~~~~~~~ 525 (611)
T 1nr0_A 454 VALSNDKQFVAVGG--QDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATD------QSRKVIPYSVANNFE 525 (611)
T ss_dssp EEECTTSCEEEEEE--TTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEE------TTSCEEEEEGGGTTE
T ss_pred EEEeCCCCEEEEeC--CCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEc------CCCCEEEEEcCCCCc
Confidence 47999999999999 699999999887543 222 2346799999999999999999 69999999995 44
Q ss_pred EEEe----ccCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 76 IIKR----FNSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 76 ~l~~----~~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
++.. .|...|++++|+|+|+.|+|++.|++|+
T Consensus 526 ~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~ 561 (611)
T 1nr0_A 526 LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVI 561 (611)
T ss_dssp ESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeeeeeeeecccceeEEEECCCCCEEEEEECCCcEE
Confidence 4332 1577899999999999999999999886
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.76 E-value=8.7e-18 Score=131.12 Aligned_cols=99 Identities=16% Similarity=0.371 Sum_probs=80.0
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCC-------ceEEeee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEe
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGD-------FSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWS 71 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~-------~~~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~ 71 (143)
++|+|+|++||+|+ .||+|++||... .+++..+ |...|++++|+|+|++||+|+ .|+.++|||
T Consensus 64 v~~sp~~~~las~s--~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s------~D~~v~iwd 135 (330)
T 2hes_X 64 VAWRPHTSLLAAGS--FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCS------RDKSVWIWE 135 (330)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEE------TTSCEEEEE
T ss_pred EEECCCCCEEEEEe--CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEe------CCCEEEEEe
Confidence 57999999999999 699999999852 3444444 335799999999999999999 699999999
Q ss_pred ec-C----cEEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 72 FQ-G----KIIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 72 ~~-g----~~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
+. + +++... +...|.+++|+|++..|+|++.|++||
T Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~ 178 (330)
T 2hes_X 136 TDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVR 178 (330)
T ss_dssp CCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred ccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEE
Confidence 93 2 234433 467899999999999999999999886
No 15
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.76 E-value=8.7e-18 Score=128.81 Aligned_cols=99 Identities=15% Similarity=0.270 Sum_probs=86.8
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l 77 (143)
++|+|+|++||+++ .||.|++||..+++....+. ...|.+++|+|||++|++++ .|+.+++||+. ++++
T Consensus 29 ~~~s~~~~~l~s~~--~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~------~d~~i~vwd~~~~~~~ 100 (312)
T 4ery_A 29 VKFSPNGEWLASSS--ADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSAS------DDKTLKIWDVSSGKCL 100 (312)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE------TTSEEEEEETTTCCEE
T ss_pred EEECCCCCEEEEee--CCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEEC------CCCEEEEEECCCCcEE
Confidence 47999999999999 69999999998887766553 35799999999999999999 69999999995 7777
Q ss_pred Eec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 78 KRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 78 ~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
... +...|.+++|+|+++.|++++.|+.|+
T Consensus 101 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~ 132 (312)
T 4ery_A 101 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 132 (312)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEE
Confidence 654 467899999999999999999999876
No 16
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.76 E-value=3.1e-18 Score=137.61 Aligned_cols=99 Identities=17% Similarity=0.248 Sum_probs=87.0
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l 77 (143)
++|+|+|++|++|+ .||+|++||+.+++.+.++. ...|++++|+|+|++|++|+ .|+.|+|||+. ++++
T Consensus 114 ~~~~p~~~~l~s~s--~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs------~D~~i~iwd~~~~~~~ 185 (410)
T 1vyh_C 114 VIFHPVFSVMVSAS--EDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS------ADMTIKLWDFQGFECI 185 (410)
T ss_dssp EEECSSSSEEEEEE--SSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEE------TTSCCCEEETTSSCEE
T ss_pred EEEcCCCCEEEEEe--CCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEe------CCCeEEEEeCCCCcee
Confidence 47999999999999 69999999999887666553 35799999999999999999 69999999996 5677
Q ss_pred Eec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 78 KRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 78 ~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
... +...|.+++|+|++..|+|++.|++|+
T Consensus 186 ~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~ 217 (410)
T 1vyh_C 186 RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIK 217 (410)
T ss_dssp ECCCCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence 665 467899999999999999999999886
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.75 E-value=1.1e-17 Score=131.33 Aligned_cols=99 Identities=16% Similarity=0.340 Sum_probs=82.8
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCc--eEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-Cc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDF--SVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GK 75 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~--~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~ 75 (143)
++|||+|++||+|+ .||++++||.++. +++..+. ...|++++|+|+|++||+++ .|+.+++||+. +.
T Consensus 67 ~~~sp~g~~l~s~s--~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s------~D~~v~iwd~~~~~ 138 (345)
T 3fm0_A 67 VAWSPCGNYLASAS--FDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS------RDKSVWVWEVDEED 138 (345)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEE------TTSCEEEEEECTTS
T ss_pred EEECCCCCEEEEEE--CCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEE------CCCeEEEEECCCCC
Confidence 57999999999999 6999999998765 4455543 35799999999999999999 69999999995 32
Q ss_pred ---EEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 76 ---IIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 76 ---~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
++... +...|.+++|+|+++.|++++.|+.|+
T Consensus 139 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~ 175 (345)
T 3fm0_A 139 EYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVK 175 (345)
T ss_dssp CEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEE
T ss_pred CeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEE
Confidence 23332 467899999999999999999999876
No 18
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.75 E-value=1.2e-17 Score=130.68 Aligned_cols=99 Identities=10% Similarity=0.089 Sum_probs=85.4
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l 77 (143)
++|+|+|++|++|+ .||+|++||+.+++++.++. ...|++++|+|+|++|++++ .|+.+++||+. ++.+
T Consensus 190 ~~~~~~~~~l~sg~--~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s------~d~~v~iwd~~~~~~~ 261 (340)
T 1got_B 190 LSLAPDTRLFVSGA--CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS------DDATCRLFDLRADQEL 261 (340)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEE------TTSCEEEEETTTTEEE
T ss_pred EEECCCCCEEEEEe--CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc------CCCcEEEEECCCCcEE
Confidence 47999999999999 69999999999988777663 35799999999999999999 69999999995 5555
Q ss_pred Eecc----CCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 78 KRFN----SPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 78 ~~~~----~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.... ...|.+++|+|+|+.|++++.|+.|+
T Consensus 262 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~ 295 (340)
T 1got_B 262 MTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295 (340)
T ss_dssp EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEccCCcccceEEEEECCCCCEEEEECCCCeEE
Confidence 5442 23799999999999999999998875
No 19
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.75 E-value=5.1e-18 Score=134.28 Aligned_cols=99 Identities=9% Similarity=0.182 Sum_probs=82.9
Q ss_pred CeEecCC-CEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCC-CEEEEeecCcceecCCcEEEEeec-Cc
Q psy5876 1 MKLRMRG-THIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTG-RYVMSGVSLWKTKADTGYWQWSFQ-GK 75 (143)
Q Consensus 1 i~~SPdG-~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG-~~lat~s~~~~~~~D~~i~iW~~~-g~ 75 (143)
++|+|++ ++||+|+ .|+.|++||+.+++++.++. ...|++++|+|+| ++||+|+ .|+.|+|||++ |+
T Consensus 232 v~~sp~~~~~la~g~--~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs------~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 232 VTWHPEKDDTFACGD--ETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASIS------EDCTVAVLDADFSE 303 (357)
T ss_dssp EEECTTSTTEEEEEE--SSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEE------TTSCEEEECTTSCE
T ss_pred hhhhhcccceEEEee--cccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEe------CCCEEEEEECCCCc
Confidence 4799985 5788887 68999999999887666553 3579999999998 5799999 69999999996 55
Q ss_pred EEEec-cCCcEEEEEEee-CCCeeeecCchhhHH
Q psy5876 76 IIKRF-NSPTFCQLRWRP-RPASLLSKEQVDKIK 107 (143)
Q Consensus 76 ~l~~~-~~~~v~~l~wsP-~~~~l~s~s~d~~i~ 107 (143)
++... |.+.|++++|+| ++..|+|++.|++|+
T Consensus 304 ~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 304 VFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVL 337 (357)
T ss_dssp EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred EeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEE
Confidence 55544 577999999999 799999999999886
No 20
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.75 E-value=1.1e-17 Score=140.75 Aligned_cols=99 Identities=17% Similarity=0.280 Sum_probs=86.3
Q ss_pred CeEecCCC-EEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcE
Q psy5876 1 MKLRMRGT-HIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKI 76 (143)
Q Consensus 1 i~~SPdG~-~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~ 76 (143)
++|+|+|+ .|++|+ .|++|++||..+++++.++. ...|++++|+|||++||+++ .|+.+++||. +|++
T Consensus 153 v~f~p~~~~~l~s~s--~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s------~D~~i~lwd~~~g~~ 224 (611)
T 1nr0_A 153 VDFKPSRPFRIISGS--DDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG------GDGTIVLYNGVDGTK 224 (611)
T ss_dssp EEECSSSSCEEEEEE--TTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEE------TTSCEEEEETTTCCE
T ss_pred EEECCCCCeEEEEEe--CCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEE------CCCcEEEEECCCCcE
Confidence 47999998 599998 69999999999888777653 35799999999999999999 6999999998 5777
Q ss_pred EEec---------cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 77 IKRF---------NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 77 l~~~---------~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
+..+ |...|.+++|+|+|+.|+|++.|++|+
T Consensus 225 ~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~ 264 (611)
T 1nr0_A 225 TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIK 264 (611)
T ss_dssp EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred eeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 6543 456899999999999999999999887
No 21
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.75 E-value=1e-17 Score=133.57 Aligned_cols=98 Identities=16% Similarity=0.290 Sum_probs=83.4
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeecc--------------------CceEEEEECCCCCEEEEeecCcc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH--------------------HQATDVEWDPTGRYVMSGVSLWK 60 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~--------------------~~v~~i~wsPdG~~lat~s~~~~ 60 (143)
++|||||++||+++ ++++++|++.+++.+..+.. ..|++++|+|||++||+|+
T Consensus 70 v~fspdg~~la~g~---~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~---- 142 (393)
T 1erj_A 70 VKFSNDGEYLATGC---NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGA---- 142 (393)
T ss_dssp EEECTTSSEEEEEC---BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEE----
T ss_pred EEECCCCCEEEEEc---CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEc----
Confidence 47999999999986 68999999998877655421 1389999999999999999
Q ss_pred eecCCcEEEEeec-CcEEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 61 TKADTGYWQWSFQ-GKIIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 61 ~~~D~~i~iW~~~-g~~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.|+.|+|||+. ++.+... +...|.+++|+|++..|++++.|++|+
T Consensus 143 --~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~ 190 (393)
T 1erj_A 143 --EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVR 190 (393)
T ss_dssp --TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred --CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEE
Confidence 69999999995 5555544 467899999999999999999999886
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.74 E-value=1.6e-17 Score=132.44 Aligned_cols=99 Identities=10% Similarity=0.214 Sum_probs=86.4
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l 77 (143)
++|||||++||+|+ .||+|++||+.+++.+..+. ...|++++|+|+|++|++++ .|+.+++||+. |+++
T Consensus 129 v~~s~dg~~l~s~~--~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s------~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 129 VCFSPDGKFLATGA--EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS------GDRTVRIWDLRTGQCS 200 (393)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE------TTSEEEEEETTTTEEE
T ss_pred EEECCCCCEEEEEc--CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEec------CCCcEEEEECCCCeeE
Confidence 47999999999999 69999999999988776653 35799999999999999999 69999999995 6666
Q ss_pred Eec-cCCcEEEEEEee-CCCeeeecCchhhHH
Q psy5876 78 KRF-NSPTFCQLRWRP-RPASLLSKEQVDKIK 107 (143)
Q Consensus 78 ~~~-~~~~v~~l~wsP-~~~~l~s~s~d~~i~ 107 (143)
... ....+..++|+| +|..|++++.|+.|+
T Consensus 201 ~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~ 232 (393)
T 1erj_A 201 LTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVR 232 (393)
T ss_dssp EEEECSSCEEEEEECSTTCCEEEEEETTSCEE
T ss_pred EEEEcCCCcEEEEEECCCCCEEEEEcCCCcEE
Confidence 554 367899999999 899999999999876
No 23
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.74 E-value=2e-17 Score=128.53 Aligned_cols=98 Identities=15% Similarity=0.297 Sum_probs=83.2
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec-cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCc-EEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGK-IIK 78 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~-~l~ 78 (143)
++|||+|++|++++ .||+|++||+.+++.+..+. +..+.+++|+|||++|++++ ++++++|+++.. ++.
T Consensus 202 ~~~sp~g~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~-------~~~i~v~~~~~~~~~~ 272 (319)
T 3frx_A 202 LTASPDGTLIASAG--KDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAAT-------ATGIKVFSLDPQYLVD 272 (319)
T ss_dssp EEECTTSSEEEEEE--TTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEE-------TTEEEEEEETTEEEEE
T ss_pred EEEcCCCCEEEEEe--CCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEc-------CCCcEEEEeCcCeeee
Confidence 47999999999999 69999999999998887764 45799999999999999988 668999999754 333
Q ss_pred ec----------cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 79 RF----------NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~----------~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.. +...+.+++|+|+|+.|++++.|+.|+
T Consensus 273 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~ 311 (319)
T 3frx_A 273 DLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIR 311 (319)
T ss_dssp EECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred ccCccccccccCcCcceeEEEECCCCCEEEEeecCceEE
Confidence 22 134689999999999999999999875
No 24
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.74 E-value=2.7e-17 Score=126.09 Aligned_cols=99 Identities=15% Similarity=0.263 Sum_probs=87.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l 77 (143)
++|+|+|++|++++ .||.|++||+.+++.+..+. ...|.+++|+|+|++|++++ .|+.+++||+. ++.+
T Consensus 71 ~~~~~~~~~l~s~~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~------~d~~i~iwd~~~~~~~ 142 (312)
T 4ery_A 71 VAWSSDSNLLVSAS--DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS------FDESVRIWDVKTGKCL 142 (312)
T ss_dssp EEECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE------TTSCEEEEETTTCCEE
T ss_pred EEEcCCCCEEEEEC--CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe------CCCcEEEEECCCCEEE
Confidence 47999999999999 69999999999988776653 35799999999999999999 69999999995 7777
Q ss_pred Eec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 78 KRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 78 ~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
... +...|.+++|+|+++.|++++.|+.|+
T Consensus 143 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (312)
T 4ery_A 143 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 174 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEecCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Confidence 654 467899999999999999999999876
No 25
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.74 E-value=3.3e-17 Score=127.85 Aligned_cols=99 Identities=12% Similarity=0.194 Sum_probs=82.5
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCC----ceEEeee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGD----FSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ- 73 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~----~~~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~- 73 (143)
++|||+|++||+|+ .||+|++||+.. .+++..+ +...|++++|+|+|++|++++ .|+.|++|+..
T Consensus 113 v~~sp~g~~las~s--~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s------~D~~i~iW~~~~ 184 (330)
T 2hes_X 113 VAWSNDGYYLATCS--RDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSS------YDDTVRIWKDYD 184 (330)
T ss_dssp EEECTTSCEEEEEE--TTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEE------TTSCEEEEEEET
T ss_pred EEECCCCCEEEEEe--CCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEc------CCCeEEEEECCC
Confidence 57999999999999 699999999842 3455544 335799999999999999999 69999999985
Q ss_pred C--cEEEec--cCCcEEEEEEeeC--CCeeeecCchhhHH
Q psy5876 74 G--KIIKRF--NSPTFCQLRWRPR--PASLLSKEQVDKIK 107 (143)
Q Consensus 74 g--~~l~~~--~~~~v~~l~wsP~--~~~l~s~s~d~~i~ 107 (143)
+ +++... |...|++++|+|+ +..|+|++.|++|+
T Consensus 185 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~ 224 (330)
T 2hes_X 185 DDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVR 224 (330)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEE
T ss_pred CCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEE
Confidence 3 355544 4678999999999 77899999999887
No 26
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.74 E-value=3.4e-17 Score=127.17 Aligned_cols=99 Identities=17% Similarity=0.254 Sum_probs=86.7
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 78 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~ 78 (143)
++|+|||++|++|+ .||+|++||+.+++.+..+. ...|.+++|+|+|++|++++ .|+.+++||+.++++.
T Consensus 71 ~~~s~dg~~l~s~s--~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s------~D~~i~vwd~~~~~~~ 142 (319)
T 3frx_A 71 CTLTADGAYALSAS--WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGS------RDKTIKVWTIKGQCLA 142 (319)
T ss_dssp EEECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEE------TTSCEEEEETTSCEEE
T ss_pred EEECCCCCEEEEEe--CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEe------CCCeEEEEECCCCeEE
Confidence 47999999999999 69999999999998877653 35799999999999999999 6999999999998877
Q ss_pred ec--cCCcEEEEEEeeCC------CeeeecCchhhHH
Q psy5876 79 RF--NSPTFCQLRWRPRP------ASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~--~~~~v~~l~wsP~~------~~l~s~s~d~~i~ 107 (143)
.. +...|.++.|+|.+ ..|++++.|+.|+
T Consensus 143 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 179 (319)
T 3frx_A 143 TLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVK 179 (319)
T ss_dssp EECCCSSCEEEEEECCC------CCEEEEEETTSCEE
T ss_pred EEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEE
Confidence 65 46789999999954 4899999999886
No 27
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.73 E-value=1.7e-17 Score=133.34 Aligned_cols=93 Identities=11% Similarity=0.264 Sum_probs=81.4
Q ss_pred CCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEEEec--c
Q psy5876 7 GTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKRF--N 81 (143)
Q Consensus 7 G~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l~~~--~ 81 (143)
|++|++|+ .||+|++||+.+++++.++. ...|++++|+|+|++|++|+ .|+.|++||+. ++++... |
T Consensus 308 g~~l~sgs--~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s------~D~~i~vwd~~~~~~~~~~~~h 379 (410)
T 1vyh_C 308 GPFLLSGS--RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA------DDKTLRVWDYKNKRCMKTLNAH 379 (410)
T ss_dssp CCEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEE------TTTEEEEECCTTSCCCEEEECC
T ss_pred CCEEEEEe--CCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEe------CCCeEEEEECCCCceEEEEcCC
Confidence 78999999 69999999999998877653 35799999999999999999 69999999995 6666554 5
Q ss_pred CCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 82 SPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 82 ~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
...|.+++|+|+++.|+|++.|++|+
T Consensus 380 ~~~v~~l~~~~~~~~l~sgs~D~~i~ 405 (410)
T 1vyh_C 380 EHFVTSLDFHKTAPYVVTGSVDQTVK 405 (410)
T ss_dssp SSCEEEEEECSSSSCEEEEETTSEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEE
Confidence 67899999999999999999999875
No 28
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.73 E-value=3.9e-17 Score=127.67 Aligned_cols=99 Identities=15% Similarity=0.175 Sum_probs=85.4
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 78 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~ 78 (143)
++|+|+|++|++|+ .||+|++||+.+++.+..+ |...|.+++|+|||++|++++ .|+.+++||+.+....
T Consensus 82 ~~~~~~~~~l~s~s--~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~------~d~~i~~wd~~~~~~~ 153 (343)
T 2xzm_R 82 LALSQENCFAISSS--WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAG------AEREIKLWNILGECKF 153 (343)
T ss_dssp EEECSSTTEEEEEE--TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEE------TTSCEEEEESSSCEEE
T ss_pred EEECCCCCEEEEEc--CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEc------CCCEEEEEeccCCcee
Confidence 47999999999999 6999999999998877665 335799999999999999999 6999999999876554
Q ss_pred ec-----cCCcEEEEEEeeCC----------CeeeecCchhhHH
Q psy5876 79 RF-----NSPTFCQLRWRPRP----------ASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~-----~~~~v~~l~wsP~~----------~~l~s~s~d~~i~ 107 (143)
.. +...|.+++|+|++ +.+++++.|+.|+
T Consensus 154 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 197 (343)
T 2xzm_R 154 SSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLK 197 (343)
T ss_dssp ECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred eeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEE
Confidence 32 35679999999997 7899999998875
No 29
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.73 E-value=6e-18 Score=143.80 Aligned_cols=95 Identities=11% Similarity=0.203 Sum_probs=78.0
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec-cC-----ceEEEEECCCCCEEEEeecCcceecCCcEEEEeecC
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HH-----QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQG 74 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~-~~-----~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g 74 (143)
++|||||++||+++ .||+|++||.++ ++..++ +. .+.+++|||||++||+|+ .|++|+|||+++
T Consensus 91 vawSPdG~~LAs~s--~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs------~DGtVkIWd~~~ 160 (588)
T 2j04_A 91 CKPSPIDDWMAVLS--NNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGN------EDGELQFFSIRK 160 (588)
T ss_dssp EEECSSSSCEEEEE--TTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEE------TTSEEEEEECCC
T ss_pred EEECCCCCEEEEEe--CCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEc------CCCEEEEEECCC
Confidence 58999999999999 699999999665 444333 22 499999999999999999 699999999975
Q ss_pred cE--------EEec------cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 75 KI--------IKRF------NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 75 ~~--------l~~~------~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.. +... |.+.|.+++|+|+| |++++.|++|+
T Consensus 161 ~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVr 205 (588)
T 2j04_A 161 NSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVF 205 (588)
T ss_dssp CTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEE
T ss_pred CccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEE
Confidence 42 3332 24689999999999 88888898886
No 30
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.73 E-value=6e-17 Score=123.91 Aligned_cols=98 Identities=12% Similarity=0.291 Sum_probs=82.3
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec-cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCc-EEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGK-IIK 78 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~-~l~ 78 (143)
++|+|+|++|++|+ .||+|++||+.+.+.+..+. +..+..++|+|++.+++++. |+.+++||+.+. ++.
T Consensus 221 ~~~s~~~~~l~s~s--~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-------d~~i~iwd~~~~~~~~ 291 (340)
T 4aow_A 221 VTVSPDGSLCASGG--KDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAAT-------GPSIKIWDLEGKIIVD 291 (340)
T ss_dssp EEECTTSSEEEEEE--TTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEE-------TTEEEEEETTTTEEEE
T ss_pred EEECCCCCEEEEEe--CCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccC-------CCEEEEEECCCCeEEE
Confidence 47999999999999 69999999999998887764 45799999999998776555 899999999754 333
Q ss_pred ec-----------cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 79 RF-----------NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~-----------~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.. +...|.+++|+|+|+.|+|++.|+.|+
T Consensus 292 ~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~ 331 (340)
T 4aow_A 292 ELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR 331 (340)
T ss_dssp EECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 21 245799999999999999999999875
No 31
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.72 E-value=4e-17 Score=127.59 Aligned_cols=96 Identities=16% Similarity=0.246 Sum_probs=81.4
Q ss_pred ec-CCCEEEEEecCCCCeEEEEECCCc-------eEEeee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEee-
Q psy5876 4 RM-RGTHIVLAELRDTGSLEFVDTGDF-------SVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF- 72 (143)
Q Consensus 4 SP-dG~~las~~~~~dg~i~iWd~~~~-------~~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~- 72 (143)
+| ||++||+|+ .||+|++||+.+. .....+ |...|++++|+|+|++|++++ .|+.+++||+
T Consensus 35 ~~~d~~~l~sgs--~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s------~D~~v~lwd~~ 106 (343)
T 2xzm_R 35 ENEDSPVLISGS--RDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSS------WDKTLRLWDLR 106 (343)
T ss_dssp TTCCCCEEEEEE--TTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEE------TTSEEEEEETT
T ss_pred cCCCCCEEEEEc--CCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEc------CCCcEEEEECC
Confidence 66 999999999 6999999998642 333333 345799999999999999999 6999999999
Q ss_pred cCcEEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 73 QGKIIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 73 ~g~~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
+|+++..+ |...|.+++|+|+++.|++++.|++|+
T Consensus 107 ~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~ 143 (343)
T 2xzm_R 107 TGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIK 143 (343)
T ss_dssp SSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEE
T ss_pred CCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEE
Confidence 47777654 577899999999999999999999886
No 32
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.72 E-value=3.3e-17 Score=130.09 Aligned_cols=98 Identities=14% Similarity=0.200 Sum_probs=78.6
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCcceecCCcEEEEe-ecCcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWS-FQGKIIK 78 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~-~~g~~l~ 78 (143)
++|||||++||+++-+.|++|+|||+.+++++..+++ ..|.+++|||||++|++++ ++++.+|+ .+|+.+.
T Consensus 139 v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s-------~~~~~~~~~~~~~~~~ 211 (365)
T 4h5i_A 139 VYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYIT-------GSSLEVISTVTGSCIA 211 (365)
T ss_dssp EEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEEC-------SSCEEEEETTTCCEEE
T ss_pred EEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecc-------ceeEEEEEeccCccee
Confidence 4799999999876532589999999999988877654 5799999999999999998 44555555 4677664
Q ss_pred ec----cCCcEEEEEEeeCCCeeeecCchhh
Q psy5876 79 RF----NSPTFCQLRWRPRPASLLSKEQVDK 105 (143)
Q Consensus 79 ~~----~~~~v~~l~wsP~~~~l~s~s~d~~ 105 (143)
.. +...|.+++|+|+++.+++++.++.
T Consensus 212 ~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~ 242 (365)
T 4h5i_A 212 RKTDFDKNWSLSKINFIADDTVLIAASLKKG 242 (365)
T ss_dssp EECCCCTTEEEEEEEEEETTEEEEEEEESSS
T ss_pred eeecCCCCCCEEEEEEcCCCCEEEEEecCCc
Confidence 32 3457999999999999999987764
No 33
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.72 E-value=5.1e-17 Score=124.87 Aligned_cols=99 Identities=15% Similarity=0.325 Sum_probs=81.2
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCC--ceEEeee--ccCceEEEEECCC--CCEEEEeecCcceecCCcEEEEeec-
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGD--FSVMNAA--EHHQATDVEWDPT--GRYVMSGVSLWKTKADTGYWQWSFQ- 73 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~--~~~~~~~--~~~~v~~i~wsPd--G~~lat~s~~~~~~~D~~i~iW~~~- 73 (143)
++|||+|++||+|+ .||+|+|||+.+ .+++.++ |...|.+++|+|+ |++||||+ .|++|+|||+.
T Consensus 15 ~~~s~~g~~las~s--~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s------~D~~v~iWd~~~ 86 (297)
T 2pm7_B 15 AVMDYYGKRMATCS--SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS------YDGKVMIWKEEN 86 (297)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE------TTTEEEEEEBSS
T ss_pred EEECCCCCEEEEEe--CCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEc------CCCEEEEEEcCC
Confidence 47999999999999 699999999874 3444444 3457999999974 99999999 69999999995
Q ss_pred Cc--EEEe--ccCCcEEEEEEeeC--CCeeeecCchhhHH
Q psy5876 74 GK--IIKR--FNSPTFCQLRWRPR--PASLLSKEQVDKIK 107 (143)
Q Consensus 74 g~--~l~~--~~~~~v~~l~wsP~--~~~l~s~s~d~~i~ 107 (143)
|+ .+.. .+...|.+++|+|+ |+.|++++.|++|+
T Consensus 87 ~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~ 126 (297)
T 2pm7_B 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVS 126 (297)
T ss_dssp SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred CceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEE
Confidence 43 3332 35678999999998 89999999999876
No 34
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.72 E-value=8.3e-17 Score=127.45 Aligned_cols=99 Identities=16% Similarity=0.217 Sum_probs=83.8
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCC-EEEEeecCcceecCCcEEEEeec-CcE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGR-YVMSGVSLWKTKADTGYWQWSFQ-GKI 76 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~-~lat~s~~~~~~~D~~i~iW~~~-g~~ 76 (143)
|+|||||++|++|+ .||+|++||+.+++++.++. ...|++++|+|+|+ +|++++ .|+.|+|||+. ++.
T Consensus 133 v~~spdg~~l~sgs--~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s------~D~~v~iwd~~~~~~ 204 (344)
T 4gqb_B 133 VSVLSSGTQAVSGS--KDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCS------EDNRILLWDTRCPKP 204 (344)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEE------TTSCEEEEETTSSSC
T ss_pred EEECCCCCEEEEEe--CCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeec------cccccccccccccce
Confidence 57999999999999 69999999999999888764 35799999999996 788998 69999999994 776
Q ss_pred EEecc----CCcEEEEEEeeCC-CeeeecCchhhHH
Q psy5876 77 IKRFN----SPTFCQLRWRPRP-ASLLSKEQVDKIK 107 (143)
Q Consensus 77 l~~~~----~~~v~~l~wsP~~-~~l~s~s~d~~i~ 107 (143)
+.... ...+.+++|+|++ +.|++++.|+.|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~ 240 (344)
T 4gqb_B 205 ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVS 240 (344)
T ss_dssp EEECC----CCCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred eeeeecceeeccceeeeecCCCCcceEEeccCCcEE
Confidence 66542 4469999999965 5778999999886
No 35
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.72 E-value=1.2e-16 Score=122.86 Aligned_cols=130 Identities=12% Similarity=0.106 Sum_probs=96.2
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec-cCceEEEEECCCCCEEEEeecCcce--------ecCCcEEEEe
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKT--------KADTGYWQWS 71 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~--------~~D~~i~iW~ 71 (143)
++|+|+|++|++++ .||.|++||+.+++.+..+. ...+..++|+|+|+++++++..... .....+++||
T Consensus 224 ~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d 301 (369)
T 3zwl_B 224 MQFSPDLTYFITSS--RDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYH 301 (369)
T ss_dssp EEECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEE
T ss_pred EEECCCCCEEEEec--CCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEe
Confidence 47999999999998 69999999999988877664 3579999999999999999842100 0011789999
Q ss_pred e-cCcEEEec--cCCcEEEEEEeeCCCeeeecCchhhHH-hhh--hhhchhccHHhHHHHhhccccc
Q psy5876 72 F-QGKIIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK-KSL--KKYTPAFEAKDRQRMNKASKYA 132 (143)
Q Consensus 72 ~-~g~~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~-~~~--~~~~~~~e~~~~~~~~~~~~~~ 132 (143)
. .++.+... +...|.+++|+|+++.|++++.|+.|+ -++ .....+|+.+...++..-++|+
T Consensus 302 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (369)
T 3zwl_B 302 KIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDFKYDVEKAAEAKEHMQEA 368 (369)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHTCCCHHHHHHHHTTC----
T ss_pred cCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccchhHHHHHHHHHHHhhHhhc
Confidence 9 47766654 467899999999999999999999887 222 2334566666666665555543
No 36
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.71 E-value=2.2e-17 Score=133.05 Aligned_cols=105 Identities=8% Similarity=0.105 Sum_probs=80.5
Q ss_pred CeEec---CCCEEEEEecCCCCeEEEEECCCceEEeeec-c----CceEEEEECCCCCEEEEeec------------C--
Q psy5876 1 MKLRM---RGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-H----HQATDVEWDPTGRYVMSGVS------------L-- 58 (143)
Q Consensus 1 i~~SP---dG~~las~~~~~dg~i~iWd~~~~~~~~~~~-~----~~v~~i~wsPdG~~lat~s~------------~-- 58 (143)
++||| +|++||+++ .|++|+|||+.+++++.+++ + ..+.+++|||||+++++++. +
T Consensus 184 l~fs~~~g~~~~LaSgS--~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~t 261 (356)
T 2w18_A 184 LTFAEVQGMQEALLGTT--IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQ 261 (356)
T ss_dssp EEEEEEETSTTEEEEEE--TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEE
T ss_pred EEeeccCCCCceEEEec--CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcE
Confidence 36778 778899999 69999999999999888764 2 25778899999998865431 1
Q ss_pred ---cc----------------------------------eecCCcEEEEee-cCcEEEecc--CCcEE-EEEEeeCCCee
Q psy5876 59 ---WK----------------------------------TKADTGYWQWSF-QGKIIKRFN--SPTFC-QLRWRPRPASL 97 (143)
Q Consensus 59 ---~~----------------------------------~~~D~~i~iW~~-~g~~l~~~~--~~~v~-~l~wsP~~~~l 97 (143)
|. ...|++|+|||+ +|++++.+. .+.+. .++|+|||++|
T Consensus 262 IklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~L 341 (356)
T 2w18_A 262 LIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHL 341 (356)
T ss_dssp EEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEE
T ss_pred EEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEE
Confidence 00 014889999999 588888764 44444 68999999999
Q ss_pred eecCchhhHH
Q psy5876 98 LSKEQVDKIK 107 (143)
Q Consensus 98 ~s~s~d~~i~ 107 (143)
+|++.|++||
T Consensus 342 aSGS~D~TIk 351 (356)
T 2w18_A 342 LAGQKDGNIF 351 (356)
T ss_dssp EEECTTSCEE
T ss_pred EEEECCCcEE
Confidence 9999999986
No 37
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.71 E-value=1.1e-16 Score=126.34 Aligned_cols=99 Identities=16% Similarity=0.297 Sum_probs=86.6
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECC--CCCEEEEeecCcceecCCcEEEEee-cCc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDP--TGRYVMSGVSLWKTKADTGYWQWSF-QGK 75 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsP--dG~~lat~s~~~~~~~D~~i~iW~~-~g~ 75 (143)
++|+|++++|++++ .||+|++||+.+++++.++. ...|.+++|+| +|++|++|+ .|+.+++||+ +|+
T Consensus 160 ~~~~~~~~~l~t~s--~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs------~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 160 CSFTNSDMQILTAS--GDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGG------CDKKAMVWDMRSGQ 231 (354)
T ss_dssp EEECSSSSEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEE------TTSCEEEEETTTCC
T ss_pred EEEeCCCCEEEEEe--CCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEe------CCCeEEEEECCCCc
Confidence 47999999999999 69999999999998877663 35799999988 578999999 6999999999 577
Q ss_pred EEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 76 IIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 76 ~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
++..+ +...|.+++|+|++..|++++.|++|+
T Consensus 232 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~ 265 (354)
T 2pbi_B 232 CVQAFETHESDVNSVRYYPSGDAFASGSDDATCR 265 (354)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEE
Confidence 77654 467899999999999999999999887
No 38
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.71 E-value=1.2e-16 Score=122.70 Aligned_cols=95 Identities=13% Similarity=0.192 Sum_probs=83.8
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l 77 (143)
++|||+|++|++++ .||.|++||+.+++.+..+. ...|++++|+|+|++|++++ .|+.+++||+. ++++
T Consensus 38 ~~~s~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~------~dg~i~iwd~~~~~~~ 109 (369)
T 3zwl_B 38 VKYNKEGDLLFSCS--KDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGS------ADYSIKLWDVSNGQCV 109 (369)
T ss_dssp EEECTTSCEEEEEE--SSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE------TTTEEEEEETTTCCEE
T ss_pred EEEcCCCCEEEEEe--CCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEe------CCCeEEEEECCCCcEE
Confidence 57999999999999 69999999999988877764 35799999999999999999 69999999995 7776
Q ss_pred Eec-cCCcEEEEEEeeCCCeeeecCch
Q psy5876 78 KRF-NSPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 78 ~~~-~~~~v~~l~wsP~~~~l~s~s~d 103 (143)
... +...+.+++|+|+++.+++++.+
T Consensus 110 ~~~~~~~~v~~~~~~~~~~~l~~~~~~ 136 (369)
T 3zwl_B 110 ATWKSPVPVKRVEFSPCGNYFLAILDN 136 (369)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEECC
T ss_pred EEeecCCCeEEEEEccCCCEEEEecCC
Confidence 655 46789999999999999998877
No 39
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.70 E-value=1.7e-16 Score=120.13 Aligned_cols=99 Identities=10% Similarity=0.229 Sum_probs=82.6
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCc----eEEeee--ccCceEEEEECC--CCCEEEEeecCcceecCCcEEEEee
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDF----SVMNAA--EHHQATDVEWDP--TGRYVMSGVSLWKTKADTGYWQWSF 72 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~----~~~~~~--~~~~v~~i~wsP--dG~~lat~s~~~~~~~D~~i~iW~~ 72 (143)
++|+|+|++||+++ .||+|++||+.++ +.+..+ +...|++++|+| ||++|++++ .|+.+++||+
T Consensus 17 ~~~~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~------~dg~v~vwd~ 88 (351)
T 3f3f_A 17 VVYDFYGRHVATCS--SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS------YDKTVKLWEE 88 (351)
T ss_dssp EEECSSSSEEEEEE--TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE------TTSCEEEEEE
T ss_pred EEEcCCCCEEEEee--CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEc------CCCeEEEEec
Confidence 57999999999999 6999999998864 344443 346799999999 699999999 6999999999
Q ss_pred cC----------cEEEec--cCCcEEEEEEeeC--CCeeeecCchhhHH
Q psy5876 73 QG----------KIIKRF--NSPTFCQLRWRPR--PASLLSKEQVDKIK 107 (143)
Q Consensus 73 ~g----------~~l~~~--~~~~v~~l~wsP~--~~~l~s~s~d~~i~ 107 (143)
.. +.+... +...|.+++|+|+ +..|++++.|+.|+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~ 137 (351)
T 3f3f_A 89 DPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILR 137 (351)
T ss_dssp CTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEE
T ss_pred CCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEE
Confidence 63 334443 4678999999999 99999999999876
No 40
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.70 E-value=8.8e-17 Score=123.54 Aligned_cols=93 Identities=14% Similarity=0.197 Sum_probs=74.6
Q ss_pred CCEEEEEecCCCCeEEEEECCCce----EEeee--ccCceEEEEECCCC---CEEEEeecCcceecCCcEEEEeecCc--
Q psy5876 7 GTHIVLAELRDTGSLEFVDTGDFS----VMNAA--EHHQATDVEWDPTG---RYVMSGVSLWKTKADTGYWQWSFQGK-- 75 (143)
Q Consensus 7 G~~las~~~~~dg~i~iWd~~~~~----~~~~~--~~~~v~~i~wsPdG---~~lat~s~~~~~~~D~~i~iW~~~g~-- 75 (143)
|++||+|+ .||+|++||+.+++ +..++ |...|.+++|+|++ ++||+++ .|+.++|||++..
T Consensus 170 ~~~l~sgs--~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s------~D~~v~iWd~~~~~~ 241 (297)
T 2pm7_B 170 SRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS------QDRTCIIWTQDNEQG 241 (297)
T ss_dssp CCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE------TTSCEEEEEESSTTS
T ss_pred cceEEEEc--CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE------CCCcEEEEEeCCCCC
Confidence 68999999 69999999987643 44444 33579999999995 8999999 6999999999631
Q ss_pred --E--EE--eccCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 76 --I--IK--RFNSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 76 --~--l~--~~~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
. +. ..+...|++++|+|+|+.|++++.|+.|+
T Consensus 242 ~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~ 279 (297)
T 2pm7_B 242 PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVT 279 (297)
T ss_dssp CCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEE
T ss_pred ccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEE
Confidence 1 11 12356899999999999999999999886
No 41
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.70 E-value=1.3e-16 Score=125.93 Aligned_cols=98 Identities=16% Similarity=0.268 Sum_probs=86.1
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEEE
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIK 78 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l~ 78 (143)
.|+|+|++||+++ .||.|++||+.+++.+..+ +...|++++|+|+|++|++++ .|+.+++||+. ++.+.
T Consensus 104 ~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s------~d~~i~iwd~~~~~~~~ 175 (420)
T 3vl1_A 104 TAKLQMRRFILGT--TEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSS------QDMQLKIWSVKDGSNPR 175 (420)
T ss_dssp EECSSSCEEEEEE--TTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEE------TTSEEEEEETTTCCCCE
T ss_pred EEecCCCEEEEEE--CCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEe------CCCeEEEEeCCCCcCce
Confidence 5899999999999 6999999999998887764 335799999999999999999 69999999994 66655
Q ss_pred ec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 79 RF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.. +...|.+++|+|++..|++++.|+.|+
T Consensus 176 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~ 206 (420)
T 3vl1_A 176 TLIGHRATVTDIAIIDRGRNVLSASLDGTIR 206 (420)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred EEcCCCCcEEEEEEcCCCCEEEEEcCCCcEE
Confidence 44 577899999999999999999999876
No 42
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.70 E-value=1.2e-16 Score=125.11 Aligned_cols=99 Identities=16% Similarity=0.263 Sum_probs=85.2
Q ss_pred CeEecCCCEEEEEecCCC---CeEEEEECCCceEEeeec---------------cCceEEEEECCCCCEEEEeecCccee
Q psy5876 1 MKLRMRGTHIVLAELRDT---GSLEFVDTGDFSVMNAAE---------------HHQATDVEWDPTGRYVMSGVSLWKTK 62 (143)
Q Consensus 1 i~~SPdG~~las~~~~~d---g~i~iWd~~~~~~~~~~~---------------~~~v~~i~wsPdG~~lat~s~~~~~~ 62 (143)
++|+|+|++|++++ .| |.|++||+.+++.+..+. ...|.+++|+|+|++|++++
T Consensus 239 i~~~~~~~~l~~~~--~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------ 310 (397)
T 1sq9_A 239 VKFSPQGSLLAIAH--DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG------ 310 (397)
T ss_dssp EEECSSTTEEEEEE--EETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE------
T ss_pred EEECCCCCEEEEEe--cCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe------
Confidence 47999999999998 58 999999999888776653 35799999999999999999
Q ss_pred cCCcEEEEeec-CcEEEecc-----------------------CCcEEEEEEeeCC----------CeeeecCchhhHH
Q psy5876 63 ADTGYWQWSFQ-GKIIKRFN-----------------------SPTFCQLRWRPRP----------ASLLSKEQVDKIK 107 (143)
Q Consensus 63 ~D~~i~iW~~~-g~~l~~~~-----------------------~~~v~~l~wsP~~----------~~l~s~s~d~~i~ 107 (143)
.|+.+++||+. ++++.... ...|.+++|+|++ +.|++++.|+.|+
T Consensus 311 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~ 389 (397)
T 1sq9_A 311 WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIR 389 (397)
T ss_dssp TTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEE
T ss_pred CCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEE
Confidence 69999999994 66665543 6789999999999 7999999998774
No 43
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.70 E-value=1.4e-16 Score=130.85 Aligned_cols=98 Identities=22% Similarity=0.336 Sum_probs=86.2
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec---cCceEEEEECC----------CCCEEEEeecCcceecCCcE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE---HHQATDVEWDP----------TGRYVMSGVSLWKTKADTGY 67 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~---~~~v~~i~wsP----------dG~~lat~s~~~~~~~D~~i 67 (143)
++|||||++|++++ .||.|++||+.+++.+..+. ...|++++|+| ||++||+++ .|+.|
T Consensus 494 ~~~s~~g~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~------~dg~i 565 (615)
T 1pgu_A 494 ISISPSETYIAAGD--VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGS------LDTNI 565 (615)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEE------TTSCE
T ss_pred EEECCCCCEEEEcC--CCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEc------CCCcE
Confidence 47999999999999 69999999999999887753 35799999999 999999999 69999
Q ss_pred EEEeec-C-cEEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 68 WQWSFQ-G-KIIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 68 ~iW~~~-g-~~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
++|++. + +++... +...|.+++|+|+++ |++++.|+.|+
T Consensus 566 ~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~ 608 (615)
T 1pgu_A 566 FIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIK 608 (615)
T ss_dssp EEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEE
T ss_pred EEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEE
Confidence 999995 4 566654 467899999999999 99999998774
No 44
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.70 E-value=1.5e-16 Score=122.28 Aligned_cols=99 Identities=10% Similarity=0.208 Sum_probs=86.0
Q ss_pred CeEecC----CCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECC-CCCEEEEeecCcceecCCcEEEEeec
Q psy5876 1 MKLRMR----GTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDP-TGRYVMSGVSLWKTKADTGYWQWSFQ 73 (143)
Q Consensus 1 i~~SPd----G~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsP-dG~~lat~s~~~~~~~D~~i~iW~~~ 73 (143)
++|+|+ |++|++|+ .||.|++||+.+++.+..+. ...|++++|+| +|++|++++ .|+.|++||+.
T Consensus 75 ~~~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~------~dg~i~iwd~~ 146 (366)
T 3k26_A 75 CAWTYDSNTSHPLLAVAG--SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVS------KDHALRLWNIQ 146 (366)
T ss_dssp EEEEECTTTCCEEEEEEE--TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEE------TTSCEEEEETT
T ss_pred EEeccCCCCCCCEEEEec--CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEe------CCCeEEEEEee
Confidence 479999 77999999 69999999999988777653 35799999999 999999999 69999999995
Q ss_pred -CcEEEec-----cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 74 -GKIIKRF-----NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 74 -g~~l~~~-----~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
++.+... +...|.+++|+|++..|++++.|+.|+
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 186 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLK 186 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEE
Confidence 6666654 467899999999999999999998875
No 45
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.69 E-value=1.8e-16 Score=125.79 Aligned_cols=99 Identities=13% Similarity=0.237 Sum_probs=83.8
Q ss_pred CeEec-CCCEEEEEecCCCCeEEEEECCCc-------eEEeee--ccCceEEEEECCCC-CEEEEeecCcceecCCcEEE
Q psy5876 1 MKLRM-RGTHIVLAELRDTGSLEFVDTGDF-------SVMNAA--EHHQATDVEWDPTG-RYVMSGVSLWKTKADTGYWQ 69 (143)
Q Consensus 1 i~~SP-dG~~las~~~~~dg~i~iWd~~~~-------~~~~~~--~~~~v~~i~wsPdG-~~lat~s~~~~~~~D~~i~i 69 (143)
++|+| +|++|++|+ .||+|++||+.++ +.+..+ +...|++++|+|+| ++|++++ .|+.+++
T Consensus 87 ~~~~p~~~~~l~s~s--~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~------~dg~i~i 158 (402)
T 2aq5_A 87 IAWCPHNDNVIASGS--EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAG------CDNVILV 158 (402)
T ss_dssp EEECTTCTTEEEEEE--TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEE------TTSCEEE
T ss_pred EEeCCCCCCEEEEEe--CCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEc------CCCEEEE
Confidence 57999 999999999 6999999999876 333333 34679999999999 6999999 6999999
Q ss_pred Eeec-CcEEEec----cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 70 WSFQ-GKIIKRF----NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 70 W~~~-g~~l~~~----~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
||+. ++.+... +...|.+++|+|++..|++++.|+.|+
T Consensus 159 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 201 (402)
T 2aq5_A 159 WDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVR 201 (402)
T ss_dssp EETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred EECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEE
Confidence 9995 6666665 467899999999999999999998876
No 46
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.69 E-value=2.4e-17 Score=128.77 Aligned_cols=99 Identities=13% Similarity=0.209 Sum_probs=80.7
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCc--eEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-Cc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDF--SVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GK 75 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~--~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~ 75 (143)
++|||||++||+++ .||.|++||+.++ +.+..+. ...|++++|+|+|++|++++ .|+.+++||+. ++
T Consensus 17 ~~~s~~g~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s------~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 17 HAFNSQRTEFVTTT--ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS------QDRNAYVYEKRPDG 88 (377)
T ss_dssp CEECSSSSEEECCC--SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEE------TTSSEEEC------
T ss_pred EEECCCCCEEEEec--CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEe------CCCeEEEEEcCCCC
Confidence 58999999999998 5899999999887 5655553 35799999999999999999 69999999995 44
Q ss_pred ---EEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 76 ---IIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 76 ---~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.+... +...|.+++|+|+++.|++++.|+.|+
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 125 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVIS 125 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEE
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEE
Confidence 23332 467899999999999999999998875
No 47
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.69 E-value=1.3e-16 Score=135.84 Aligned_cols=99 Identities=10% Similarity=0.178 Sum_probs=87.3
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l 77 (143)
++|||||++||+++ .||.|++||+.+++.+..+. ...|++++|+|||++||+++ .|+.+++|++ +|+.+
T Consensus 19 i~~sp~~~~la~~~--~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------~dg~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 19 IDFHPTEPWVLTTL--YSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS------DDFRIRVFNYNTGEKV 90 (814)
T ss_dssp EEECSSSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE------TTSEEEEEETTTCCEE
T ss_pred EEECCCCCEEEEEe--CCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEe------CCCeEEEEECCCCcEE
Confidence 58999999999998 68999999999988877653 35799999999999999999 5999999999 47776
Q ss_pred Eec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 78 KRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 78 ~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
... +...|.+++|+|+++.|++++.|+.|+
T Consensus 91 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 122 (814)
T 3mkq_A 91 VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVK 122 (814)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred EEEecCCCCEEEEEEeCCCCEEEEEcCCCEEE
Confidence 654 467899999999999999999998775
No 48
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.69 E-value=8.9e-17 Score=124.67 Aligned_cols=99 Identities=15% Similarity=0.251 Sum_probs=81.8
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCce--EEeee--ccCceEEEEECC--CCCEEEEeecCcceecCCcEEEEeec-
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFS--VMNAA--EHHQATDVEWDP--TGRYVMSGVSLWKTKADTGYWQWSFQ- 73 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~--~~~~~--~~~~v~~i~wsP--dG~~lat~s~~~~~~~D~~i~iW~~~- 73 (143)
++|+|+|++||+|+ .|++|++||+.+++ ++..+ |...|.+++|+| +|++||||+ .|+.|+|||+.
T Consensus 19 v~~s~~g~~lasgs--~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s------~D~~v~iWd~~~ 90 (316)
T 3bg1_A 19 AQMDYYGTRLATCS--SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCS------YDRKVIIWREEN 90 (316)
T ss_dssp EEECGGGCEEEEEE--TTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEE------TTSCEEEECCSS
T ss_pred eeEcCCCCEEEEEe--CCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEE------CCCEEEEEECCC
Confidence 47999999999999 69999999988764 34443 345799999987 499999999 69999999995
Q ss_pred Cc--EEEec--cCCcEEEEEEeeC--CCeeeecCchhhHH
Q psy5876 74 GK--IIKRF--NSPTFCQLRWRPR--PASLLSKEQVDKIK 107 (143)
Q Consensus 74 g~--~l~~~--~~~~v~~l~wsP~--~~~l~s~s~d~~i~ 107 (143)
|+ .+... +...|.+++|+|+ +..|++++.|+.|+
T Consensus 91 ~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~ 130 (316)
T 3bg1_A 91 GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130 (316)
T ss_dssp SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEE
T ss_pred CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEE
Confidence 43 44433 4678999999998 78999999999876
No 49
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.69 E-value=9.1e-17 Score=125.38 Aligned_cols=98 Identities=8% Similarity=0.023 Sum_probs=81.6
Q ss_pred CeEec--CCCEEEEEecCCCCeEEEEECCCceEEeee--cc-CceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-C
Q psy5876 1 MKLRM--RGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-G 74 (143)
Q Consensus 1 i~~SP--dG~~las~~~~~dg~i~iWd~~~~~~~~~~--~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g 74 (143)
++|+| +|++|++++ .||+|++||+.+++.+... ++ ..+++++|+|||++||+|+ .|+.|+|||+. +
T Consensus 131 ~~~~~~~~~~~l~s~s--~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~------~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 131 MYGHNEVNTEYFIWAD--NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYS------PDGILDVYNLSSP 202 (343)
T ss_dssp EECCC---CCEEEEEE--TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEEC------TTSCEEEEESSCT
T ss_pred EEcCCCCCCCEEEEEe--CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEc------CCCEEEEEECCCC
Confidence 47899 999999999 6999999999988876543 22 3699999999999999999 69999999994 6
Q ss_pred cEE-Ee--c-cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 75 KII-KR--F-NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 75 ~~l-~~--~-~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
+.+ .. . |...|.+++|+|+|..|++++++ .|+
T Consensus 203 ~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~ 238 (343)
T 3lrv_A 203 DQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVV 238 (343)
T ss_dssp TSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEE
T ss_pred CCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEE
Confidence 655 33 3 46799999999999999999966 665
No 50
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.69 E-value=9.5e-17 Score=126.70 Aligned_cols=99 Identities=10% Similarity=0.223 Sum_probs=79.9
Q ss_pred CeEecCCCEEEEEecCCCCe-EEEEECCCceEEeeec---c-CceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-C
Q psy5876 1 MKLRMRGTHIVLAELRDTGS-LEFVDTGDFSVMNAAE---H-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-G 74 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~-i~iWd~~~~~~~~~~~---~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g 74 (143)
++|||||++||+|+ .||+ |++||+.+++++.++. | ..|++++|+|||++|++++ .|+.++|||+. +
T Consensus 201 ~~~s~~g~~l~s~s--~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s------~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 201 VRLNRKSDMVATCS--QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVS------DKWTLHVFEIFND 272 (355)
T ss_dssp EEECTTSSEEEEEE--TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEE------TTCEEEEEESSCC
T ss_pred EEECCCCCEEEEEe--CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEE------CCCEEEEEEccCC
Confidence 57999999999999 6998 9999999998877663 3 5799999999999999999 69999999984 2
Q ss_pred cEE--Ee--------------------cc---CCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 75 KII--KR--------------------FN---SPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 75 ~~l--~~--------------------~~---~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
... .. .. ......++|+|+|+.|++++.|+.++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~ 330 (355)
T 3vu4_A 273 QDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIE 330 (355)
T ss_dssp SCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEE
T ss_pred CCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEE
Confidence 210 00 00 11236689999999999999988764
No 51
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.68 E-value=1.9e-16 Score=120.03 Aligned_cols=95 Identities=16% Similarity=0.220 Sum_probs=76.4
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeee--c-c-CceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-Cc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAA--E-H-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GK 75 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~--~-~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~ 75 (143)
|+|||++ .||+|. |++|+|||+.+++++..+ + | ..|++++|+|+|++||+|+ .|+.|++|++. |+
T Consensus 31 l~WS~~~-~lAvg~---D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs------~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 31 VDWSSGN-VLAVAL---DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT------SSAEVQLWDVQQQK 100 (318)
T ss_dssp EEECTTS-EEEEEE---TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE------TTSEEEEEETTTTE
T ss_pred EEECCCC-EEEEEe---CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEE------CCCcEEEeecCCce
Confidence 5799997 777765 899999999998876654 2 2 4699999999999999999 69999999995 77
Q ss_pred EEEecc--CCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 76 IIKRFN--SPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 76 ~l~~~~--~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
++.... ...+. ++++++..+++++.++.++
T Consensus 101 ~~~~~~~h~~~~~--~~~~~~~~l~s~~~~~~~~ 132 (318)
T 4ggc_A 101 RLRNMTSHSARVG--SLSWNSYILSSGSRSGHIH 132 (318)
T ss_dssp EEEEEECCSSCEE--EEEEETTEEEEEETTSEEE
T ss_pred eEEEecCccceEE--EeecCCCEEEEEecCCceE
Confidence 776654 34454 5667788999999888765
No 52
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.68 E-value=1.2e-16 Score=140.96 Aligned_cols=98 Identities=9% Similarity=0.096 Sum_probs=81.2
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCc---------------------------------------------eEEeee
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDF---------------------------------------------SVMNAA 35 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~---------------------------------------------~~~~~~ 35 (143)
|+|||||++||+|+ .||+|+|||+.++ +++..+
T Consensus 494 vafspdg~~LAsgs--~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l 571 (902)
T 2oaj_A 494 ISFAAETLELAVSI--ETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAV 571 (902)
T ss_dssp EEEETTTTEEEEEE--TTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEE
T ss_pred EEecCCCCeEEEEe--cCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEE
Confidence 58999999999999 6999999998754 234443
Q ss_pred --ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEE-Ee--------ccCCcEEEEEEe-----eCC---Ce
Q psy5876 36 --EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII-KR--------FNSPTFCQLRWR-----PRP---AS 96 (143)
Q Consensus 36 --~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l-~~--------~~~~~v~~l~ws-----P~~---~~ 96 (143)
+...|++++||||| +||+|+ .|+.|+|||+++..+ ++ .|...|++++|+ ||| ++
T Consensus 572 ~~h~~~V~svafSpdG-~lAsgs------~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~ 644 (902)
T 2oaj_A 572 HANKGKTSAINNSNIG-FVGIAY------AAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSIL 644 (902)
T ss_dssp CCCSCSEEEEEECBTS-EEEEEE------TTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEE
T ss_pred EcCCCcEEEEEecCCc-EEEEEe------CCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceE
Confidence 34679999999999 999999 699999999976643 31 235579999999 886 89
Q ss_pred eeecCchhhHH
Q psy5876 97 LLSKEQVDKIK 107 (143)
Q Consensus 97 l~s~s~d~~i~ 107 (143)
|++++.|++|+
T Consensus 645 l~sgs~D~tv~ 655 (902)
T 2oaj_A 645 MVCGTDMGEVI 655 (902)
T ss_dssp EEEEETTSEEE
T ss_pred EEEEecCCcEE
Confidence 99999999987
No 53
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.68 E-value=8.2e-17 Score=129.70 Aligned_cols=99 Identities=12% Similarity=0.258 Sum_probs=80.6
Q ss_pred CeEec-CCCEEEEEecCCCCeEEEEECCCce--EEeee--ccCceEEEEECC-CCCEEEEeecCcceecCCcEEEEeecC
Q psy5876 1 MKLRM-RGTHIVLAELRDTGSLEFVDTGDFS--VMNAA--EHHQATDVEWDP-TGRYVMSGVSLWKTKADTGYWQWSFQG 74 (143)
Q Consensus 1 i~~SP-dG~~las~~~~~dg~i~iWd~~~~~--~~~~~--~~~~v~~i~wsP-dG~~lat~s~~~~~~~D~~i~iW~~~g 74 (143)
|+|+| ++++||+|+ .||+|+|||+.+++ .+..+ |...|++++|+| ||++|+||+ .|++|+|||+++
T Consensus 125 l~~~P~~~~~lasGs--~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s------~D~~v~iwd~~~ 196 (435)
T 4e54_B 125 LAWHPTHPSTVAVGS--KGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASS------MEGTTRLQDFKG 196 (435)
T ss_dssp EEECSSCTTCEEEEE--TTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEEC------SSSCEEEEETTS
T ss_pred EEEeCCCCCEEEEEe--CCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEe------CCCEEEEeeccC
Confidence 58999 577999999 69999999987653 33332 345799999999 789999999 699999999987
Q ss_pred cEEEec---c--CCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 75 KIIKRF---N--SPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 75 ~~l~~~---~--~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
..+... + ...+.+++|+|++..|++++.|+.|+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~ 234 (435)
T 4e54_B 197 NILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVI 234 (435)
T ss_dssp CEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEE
T ss_pred CceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEe
Confidence 765432 1 33578999999999999999999876
No 54
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.68 E-value=3.4e-16 Score=122.35 Aligned_cols=99 Identities=11% Similarity=0.286 Sum_probs=81.5
Q ss_pred CeEecCCC-EEEEEecCCCCeEEEEEC----CCce------EEeeec-----------c-CceEEEEECCCCCEEEEeec
Q psy5876 1 MKLRMRGT-HIVLAELRDTGSLEFVDT----GDFS------VMNAAE-----------H-HQATDVEWDPTGRYVMSGVS 57 (143)
Q Consensus 1 i~~SPdG~-~las~~~~~dg~i~iWd~----~~~~------~~~~~~-----------~-~~v~~i~wsPdG~~lat~s~ 57 (143)
++|||+|+ +||+++ .||.|++||+ .+++ ....+. | ..|++++|+|||++|++++
T Consensus 51 ~~~s~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~- 127 (425)
T 1r5m_A 51 STWNPLDESILAYGE--KNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGV- 127 (425)
T ss_dssp EEECSSCTTEEEEEE--TBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEE-
T ss_pred EEECCCCCcEEEEec--CCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEe-
Confidence 47999999 999999 6899999999 7766 333221 2 3799999999999999999
Q ss_pred CcceecCCcEEEEeecCcEEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 58 LWKTKADTGYWQWSFQGKIIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 58 ~~~~~~D~~i~iW~~~g~~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.|+.+++|+.+|+.+... +...|.+++|+|+++.|++++.|+.|+
T Consensus 128 -----~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (425)
T 1r5m_A 128 -----ENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTI 174 (425)
T ss_dssp -----TTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEE
T ss_pred -----CCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEE
Confidence 689999999888887765 467899999999999999999998876
No 55
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.68 E-value=3.6e-16 Score=132.75 Aligned_cols=99 Identities=15% Similarity=0.192 Sum_probs=85.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 78 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~ 78 (143)
++|||+|++|++|+ .||+|++||+.+++.+..+ |...|.+++|+|||++|+|++ .|+.|+|||..+.+..
T Consensus 436 v~~s~~g~~l~sgs--~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s------~D~~i~iwd~~~~~~~ 507 (694)
T 3dm0_A 436 VVLSSDGQFALSGS--WDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSAS------RDRTIKLWNTLGECKY 507 (694)
T ss_dssp EEECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEE------TTSCEEEECTTSCEEE
T ss_pred EEECCCCCEEEEEe--CCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEe------CCCEEEEEECCCCcce
Confidence 47999999999999 6999999999998877665 345799999999999999999 6999999999776544
Q ss_pred ec------cCCcEEEEEEeeCC--CeeeecCchhhHH
Q psy5876 79 RF------NSPTFCQLRWRPRP--ASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~------~~~~v~~l~wsP~~--~~l~s~s~d~~i~ 107 (143)
.. |...|.+++|+|++ ..|++++.|+.|+
T Consensus 508 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~ 544 (694)
T 3dm0_A 508 TISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 544 (694)
T ss_dssp EECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEE
T ss_pred eeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEE
Confidence 32 34579999999997 5799999999886
No 56
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.67 E-value=1.8e-16 Score=122.91 Aligned_cols=93 Identities=11% Similarity=0.144 Sum_probs=75.4
Q ss_pred CCEEEEEecCCCCeEEEEECCCc---eEEeee--ccCceEEEEECCCC----CEEEEeecCcceecCCcEEEEeecC---
Q psy5876 7 GTHIVLAELRDTGSLEFVDTGDF---SVMNAA--EHHQATDVEWDPTG----RYVMSGVSLWKTKADTGYWQWSFQG--- 74 (143)
Q Consensus 7 G~~las~~~~~dg~i~iWd~~~~---~~~~~~--~~~~v~~i~wsPdG----~~lat~s~~~~~~~D~~i~iW~~~g--- 74 (143)
|++||+|+ .||+|++||+.+. +.+..+ |...|.+++|+|++ ++||+++ .|+.|+||++..
T Consensus 179 ~~~l~sgs--~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s------~D~~v~iw~~~~~~~ 250 (316)
T 3bg1_A 179 IKRFASGG--CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCS------QDGRVFIWTCDDASS 250 (316)
T ss_dssp CCBEECCB--TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEE------TTCEEEEEECSSTTC
T ss_pred cceEEEec--CCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEc------CCCeEEEEEccCccc
Confidence 57999998 6999999998753 445444 33579999999997 8999999 699999999853
Q ss_pred -c---EEEeccCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 75 -K---IIKRFNSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 75 -~---~l~~~~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
. .+...+...|++++|+|+++.|++++.|++|+
T Consensus 251 ~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~ 287 (316)
T 3bg1_A 251 NTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVT 287 (316)
T ss_dssp CCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEE
T ss_pred cchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEE
Confidence 1 12223467899999999999999999999886
No 57
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.67 E-value=4.8e-16 Score=120.22 Aligned_cols=99 Identities=13% Similarity=0.258 Sum_probs=83.4
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCce--EEeee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-Cc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFS--VMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GK 75 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~--~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~ 75 (143)
++|+|||++||+++ .||.|++||+.+++ .+..+ +...|++++|+|+|++|++++ .|+.+++||+. ++
T Consensus 14 ~~~s~~~~~l~~~~--~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~------~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 14 HAWNKDRTQIAICP--NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG------TDRNAYVWTLKGRT 85 (372)
T ss_dssp EEECTTSSEEEEEC--SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE------TTSCEEEEEEETTE
T ss_pred EEECCCCCEEEEEe--CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEc------CCCeEEEEECCCCe
Confidence 57999999999998 58999999998876 55554 335799999999999999999 69999999996 44
Q ss_pred EEEe----ccCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 76 IIKR----FNSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 76 ~l~~----~~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.... .+...|.+++|+|+++.|++++.|+.|+
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~ 121 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVIS 121 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEE
T ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEE
Confidence 3322 2467899999999999999999998875
No 58
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.67 E-value=4.2e-16 Score=119.67 Aligned_cols=99 Identities=14% Similarity=0.296 Sum_probs=82.6
Q ss_pred CeEecC---CCEEEEEecCCCCeEEEEECCC-ceEE-eee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec
Q psy5876 1 MKLRMR---GTHIVLAELRDTGSLEFVDTGD-FSVM-NAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ 73 (143)
Q Consensus 1 i~~SPd---G~~las~~~~~dg~i~iWd~~~-~~~~-~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~ 73 (143)
++|+|+ |++|++|+ .||.|++||+.+ ++.+ ..+ +...|++++|+|+|++|++++ .|+.+++||+.
T Consensus 45 ~~~~~~~~~g~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~------~dg~v~iwd~~ 116 (368)
T 3mmy_A 45 LSFSPPTLPGNFLIAGS--WANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS------CDKTAKMWDLS 116 (368)
T ss_dssp EEECCTTSSSEEEEEEE--TTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE------TTSEEEEEETT
T ss_pred EEEcCCCCCceEEEEEC--CCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc------CCCcEEEEEcC
Confidence 579999 69999999 699999999986 4443 333 346899999999999999999 69999999996
Q ss_pred -CcEEEec-cCCcEEEEEE--eeCCCeeeecCchhhHH
Q psy5876 74 -GKIIKRF-NSPTFCQLRW--RPRPASLLSKEQVDKIK 107 (143)
Q Consensus 74 -g~~l~~~-~~~~v~~l~w--sP~~~~l~s~s~d~~i~ 107 (143)
++.+... +...|.+++| +|++..|++++.|+.|+
T Consensus 117 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~ 154 (368)
T 3mmy_A 117 SNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLK 154 (368)
T ss_dssp TTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred CCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEE
Confidence 5444433 5778999999 89999999999999876
No 59
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.67 E-value=1.7e-16 Score=123.86 Aligned_cols=99 Identities=8% Similarity=0.144 Sum_probs=79.8
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceE---Eeee---ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSV---MNAA---EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ- 73 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~---~~~~---~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~- 73 (143)
++|+|+|++|++++ .||.|++||+++++. +..+ +...|++++|+|+|++|++++ .|+.+++||+.
T Consensus 106 ~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~------~d~~i~iwd~~~ 177 (377)
T 3dwl_C 106 VRWSPNEDKFAVGS--GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC------ADRKAYVLSAYV 177 (377)
T ss_dssp EECCTTSSCCEEEE--SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE------SSSCEEEEEECC
T ss_pred EEECCCCCEEEEEe--cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe------CCCEEEEEEEEe
Confidence 47999999999999 699999999987652 3333 335799999999999999999 69999999984
Q ss_pred ------------------CcEEEec-cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 74 ------------------GKIIKRF-NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 74 ------------------g~~l~~~-~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
++++... +...|.+++|+|+++.|++++.|+.|+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~ 230 (377)
T 3dwl_C 178 RDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVT 230 (377)
T ss_dssp SSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC
T ss_pred cccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEE
Confidence 4455544 456799999999999999999999876
No 60
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.67 E-value=6e-17 Score=127.94 Aligned_cols=99 Identities=18% Similarity=0.218 Sum_probs=81.4
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l 77 (143)
++|+|+|++|++++ .||+|++||+.+++.+..+ +...|++++|+|||++|++++ .|+.+++||+. ++.+
T Consensus 145 ~~~~~~~~~l~s~s--~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~------~d~~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 145 LKFFPSGEALISSS--QDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSAS------LDGTIRLWECGTGTTI 216 (420)
T ss_dssp EEECTTSSEEEEEE--TTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEE------TTSCEEEEETTTTEEE
T ss_pred EEECCCCCEEEEEe--CCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEc------CCCcEEEeECCCCcee
Confidence 57999999999999 6999999999988766554 346799999999999999999 69999999995 7666
Q ss_pred Eecc-----CCcEEEEE---------------------EeeCCCeeeecCchhhHH
Q psy5876 78 KRFN-----SPTFCQLR---------------------WRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 78 ~~~~-----~~~v~~l~---------------------wsP~~~~l~s~s~d~~i~ 107 (143)
.... ...+..++ |+|+++.|++++.|+.|+
T Consensus 217 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 272 (420)
T 3vl1_A 217 HTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVIT 272 (420)
T ss_dssp EEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEE
T ss_pred EEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEE
Confidence 5542 33455555 478899999999998875
No 61
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.67 E-value=4.4e-16 Score=120.25 Aligned_cols=99 Identities=16% Similarity=0.327 Sum_probs=83.3
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECC--CceEEeee--ccCceEEEEECCC--CCEEEEeecCcceecCCcEEEEeec-
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTG--DFSVMNAA--EHHQATDVEWDPT--GRYVMSGVSLWKTKADTGYWQWSFQ- 73 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~--~~~~~~~~--~~~~v~~i~wsPd--G~~lat~s~~~~~~~D~~i~iW~~~- 73 (143)
++|||+|++||+|+ .||.|++||+. +++.+..+ +...|++++|+|+ |++|++++ .|+.|++||+.
T Consensus 17 ~~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~------~dg~v~iwd~~~ 88 (379)
T 3jrp_A 17 AVLDYYGKRLATCS--SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS------YDGKVLIWKEEN 88 (379)
T ss_dssp EEECSSSSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE------TTSCEEEEEEET
T ss_pred EEEcCCCCEEEEEE--CCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec------cCCEEEEEEcCC
Confidence 57999999999998 69999999987 55565554 3357999999988 99999999 69999999996
Q ss_pred Cc--EEEec--cCCcEEEEEEeeC--CCeeeecCchhhHH
Q psy5876 74 GK--IIKRF--NSPTFCQLRWRPR--PASLLSKEQVDKIK 107 (143)
Q Consensus 74 g~--~l~~~--~~~~v~~l~wsP~--~~~l~s~s~d~~i~ 107 (143)
++ .+... +...|.+++|+|+ +..|++++.|+.|+
T Consensus 89 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~ 128 (379)
T 3jrp_A 89 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 128 (379)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEE
Confidence 44 44433 4678999999999 99999999998875
No 62
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.67 E-value=8e-16 Score=117.02 Aligned_cols=99 Identities=10% Similarity=0.118 Sum_probs=84.4
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec-cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIK 78 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l~ 78 (143)
++|+|+|++|++++ .+|.|++||+.+.+...... ...+.+++|+|||++|++++ .|+.+++|++. ++.+.
T Consensus 230 ~~~s~~~~~l~~~~--~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 230 LGYCPTGEWLAVGM--ESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTG------KDNLLNAWRTPYGASIF 301 (337)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEE------TTSEEEEEETTTCCEEE
T ss_pred EEECCCCCEEEEEc--CCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEec------CCCcEEEEECCCCeEEE
Confidence 47999999999998 68999999999877654433 35799999999999999999 69999999995 66665
Q ss_pred ec-cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 79 RF-NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~-~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.. +...+.+++|+|+++.|++++.|+.|+
T Consensus 302 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 331 (337)
T 1gxr_A 302 QSKESSSVLSCDISVDDKYIVTGSGDKKAT 331 (337)
T ss_dssp EEECSSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCeEE
Confidence 43 577899999999999999999988763
No 63
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.66 E-value=2.3e-16 Score=124.79 Aligned_cols=98 Identities=15% Similarity=0.174 Sum_probs=74.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEee-----e-ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNA-----A-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ- 73 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~-----~-~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~- 73 (143)
++|+|+|++|++ + .||+|+|||+.+++.+.. . +...|++++|+|||++|++++ .|+.|++||+.
T Consensus 100 ~~~s~d~~~l~~-s--~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs------~dg~v~iwd~~~ 170 (357)
T 4g56_B 100 VAWVSEKGILVA-S--DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG------KDFSVKVWDLSQ 170 (357)
T ss_dssp EEEETTTEEEEE-E--TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE------TTSCEEEEETTT
T ss_pred EEEcCCCCEEEE-E--CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe------CCCeEEEEECCC
Confidence 579999977654 4 489999999987664321 1 235799999999999999999 69999999995
Q ss_pred CcEEEec--cCCcEEEEEEeeCCC-eeeecCchhhHH
Q psy5876 74 GKIIKRF--NSPTFCQLRWRPRPA-SLLSKEQVDKIK 107 (143)
Q Consensus 74 g~~l~~~--~~~~v~~l~wsP~~~-~l~s~s~d~~i~ 107 (143)
++++..+ +...|.+++|+|++. .+++++.|+.|+
T Consensus 171 ~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~ 207 (357)
T 4g56_B 171 KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRIL 207 (357)
T ss_dssp TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEE
T ss_pred CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceE
Confidence 6666654 467899999999986 688999999876
No 64
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.66 E-value=9.9e-16 Score=116.51 Aligned_cols=99 Identities=10% Similarity=0.126 Sum_probs=85.3
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEEe
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 79 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~~ 79 (143)
++|+|+|++|++++ .||.|++||+.+++.+....+ ..+.+++|+|+|++|++++ .|+.+++|++....+..
T Consensus 189 ~~~~~~~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------~~~~i~~~~~~~~~~~~ 260 (337)
T 1gxr_A 189 IDISNDGTKLWTGG--LDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGM------ESSNVEVLHVNKPDKYQ 260 (337)
T ss_dssp EEECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEE------TTSCEEEEETTSSCEEE
T ss_pred EEECCCCCEEEEEe--cCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEc------CCCcEEEEECCCCCeEE
Confidence 47999999999999 699999999999888776643 5799999999999999999 58999999996443333
Q ss_pred --ccCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 80 --FNSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 80 --~~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.+...|.+++|+|+++.|++++.|+.|+
T Consensus 261 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 290 (337)
T 1gxr_A 261 LHLHESCVLSLKFAYCGKWFVSTGKDNLLN 290 (337)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EcCCccceeEEEECCCCCEEEEecCCCcEE
Confidence 3467899999999999999999998775
No 65
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.66 E-value=7.1e-16 Score=121.68 Aligned_cols=97 Identities=10% Similarity=0.191 Sum_probs=78.0
Q ss_pred eEecCCCEEEEE-ecCCCCeEEEEECCCce----------------EEeee--ccCceEEEEECCCCCEEEEeecCccee
Q psy5876 2 KLRMRGTHIVLA-ELRDTGSLEFVDTGDFS----------------VMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTK 62 (143)
Q Consensus 2 ~~SPdG~~las~-~~~~dg~i~iWd~~~~~----------------~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~ 62 (143)
+++| +++|.+ +. .+|.|++||+.+++ ++..+ |...|++++|+|||++||+|+
T Consensus 144 ~~s~--~~la~~sg~-~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s------ 214 (355)
T 3vu4_A 144 EFSN--GLLVYSNEF-NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCS------ 214 (355)
T ss_dssp EEET--TEEEEEESS-CTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEE------
T ss_pred EEEc--cEEEEeCCC-cCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEe------
Confidence 4666 677775 33 68999999998754 12333 346799999999999999999
Q ss_pred cCCc-EEEEeec-CcEEEec----cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 63 ADTG-YWQWSFQ-GKIIKRF----NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 63 ~D~~-i~iW~~~-g~~l~~~----~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.|++ ++|||+. |+++..+ +...|.+++|+|+|+.|++++.|++|+
T Consensus 215 ~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~ 265 (355)
T 3vu4_A 215 QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLH 265 (355)
T ss_dssp TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEE
T ss_pred CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEE
Confidence 6998 9999995 8877654 466899999999999999999999886
No 66
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.66 E-value=3.3e-16 Score=122.90 Aligned_cols=99 Identities=10% Similarity=0.154 Sum_probs=83.6
Q ss_pred CeEecCC-CEEEEEecCCCCeEEEEECCCceEEeee----ccCceEEEEECC-CCCEEEEeecCcceecCCcEEEEeecC
Q psy5876 1 MKLRMRG-THIVLAELRDTGSLEFVDTGDFSVMNAA----EHHQATDVEWDP-TGRYVMSGVSLWKTKADTGYWQWSFQG 74 (143)
Q Consensus 1 i~~SPdG-~~las~~~~~dg~i~iWd~~~~~~~~~~----~~~~v~~i~wsP-dG~~lat~s~~~~~~~D~~i~iW~~~g 74 (143)
++|+|+| ++||+|+ .||.|++||+.+++..... +...|.+++|+| ++++|++++ .|+.+++||+.+
T Consensus 79 ~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~------~d~~i~iwd~~~ 150 (383)
T 3ei3_B 79 LEWHPTHPTTVAVGS--KGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS------IRGATTLRDFSG 150 (383)
T ss_dssp EEECSSCTTEEEEEE--BTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE------TTTEEEEEETTS
T ss_pred EEECCCCCCEEEEEc--CCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe------CCCEEEEEECCC
Confidence 4799999 9999999 5999999999876544432 335799999999 789999999 699999999988
Q ss_pred cEEEecc-----CCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 75 KIIKRFN-----SPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 75 ~~l~~~~-----~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
..+.... ...|.+++|+|+++.|++++.|+.|+
T Consensus 151 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 188 (383)
T 3ei3_B 151 SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLL 188 (383)
T ss_dssp CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEE
T ss_pred CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEE
Confidence 7665542 35699999999999999999998775
No 67
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.66 E-value=8.4e-16 Score=123.08 Aligned_cols=103 Identities=13% Similarity=0.254 Sum_probs=85.0
Q ss_pred CeEecCCCEE-EEEecCCCCeEEEEECCCceEEeeec-cCceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEE
Q psy5876 1 MKLRMRGTHI-VLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKII 77 (143)
Q Consensus 1 i~~SPdG~~l-as~~~~~dg~i~iWd~~~~~~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l 77 (143)
++|+|++..+ ++++-+.|++|+|||+.+++++.... +..+.++.|+|+++++++++.. .|+.|+|||+ +++++
T Consensus 282 ~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~----~d~~I~iwd~~~~~~v 357 (420)
T 4gga_A 282 VAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF----AQNQLVIWKYPTMAKV 357 (420)
T ss_dssp EEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECT----TTCCEEEEETTTCCEE
T ss_pred eeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEec----CCCEEEEEECCCCcEE
Confidence 4689977644 44331168999999999999887764 4679999999999999987632 4899999999 58888
Q ss_pred Eec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 78 KRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 78 ~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
..+ |...|.+++|+|+|+.|+|++.|++||
T Consensus 358 ~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvr 389 (420)
T 4gga_A 358 AELKGHTSRVLSLTMSPDGATVASAAADETLR 389 (420)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEecCCeEE
Confidence 765 577999999999999999999999987
No 68
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.66 E-value=1.5e-16 Score=124.07 Aligned_cols=98 Identities=8% Similarity=0.098 Sum_probs=76.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEE-eee---ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-Cc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVM-NAA---EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GK 75 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~-~~~---~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~ 75 (143)
++|+|||++||+|+ .||.|++||+.+++.+ ..+ |...|++++|+|+|++|++++ |+.+++||+. ++
T Consensus 176 ~~~~pdg~~lasg~--~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-------~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 176 GVLHKDSLLLALYS--PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-------DQTVVCFDLRKDV 246 (343)
T ss_dssp EEECTTSCEEEEEC--TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-------SSBEEEEETTSST
T ss_pred EEECCCCCEEEEEc--CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-------CCeEEEEEcCCCC
Confidence 47999999999998 6999999999987755 333 346899999999999999999 4499999995 55
Q ss_pred EEEecc-----CCcE--EEEEEeeCCCeeeecCc-hhhHH
Q psy5876 76 IIKRFN-----SPTF--CQLRWRPRPASLLSKEQ-VDKIK 107 (143)
Q Consensus 76 ~l~~~~-----~~~v--~~l~wsP~~~~l~s~s~-d~~i~ 107 (143)
.+.... ...+ .+++|+|+|+.|++++. |+.|+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~ 286 (343)
T 3lrv_A 247 GTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLT 286 (343)
T ss_dssp TCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEE
T ss_pred cceeecccccccccccceEEEECCCCCEEEEecCCCCcEE
Confidence 443322 1233 36999999999999776 66654
No 69
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.65 E-value=5.5e-17 Score=136.02 Aligned_cols=98 Identities=7% Similarity=-0.007 Sum_probs=81.6
Q ss_pred eEecCC-CEEEEEecCCCCeEEEEECCCceEEeee--cc--CceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-Cc
Q psy5876 2 KLRMRG-THIVLAELRDTGSLEFVDTGDFSVMNAA--EH--HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GK 75 (143)
Q Consensus 2 ~~SPdG-~~las~~~~~dg~i~iWd~~~~~~~~~~--~~--~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~ 75 (143)
+|+|+| ++||+|+ .||+|+|||+.+++++.++ +. ..+.+++|+|+|+.||+++ .|++|++||+. +.
T Consensus 317 ~~s~~g~~~laS~S--~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~------~d~tv~lwd~~~~~ 388 (524)
T 2j04_B 317 AYSDFEDTVVSTVA--VDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSD------GASSLRAVPSRAAF 388 (524)
T ss_dssp ECCTTSCCEEEEEE--TTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEEC------SSSEEEEEETTCTT
T ss_pred EcCCCCCeEEEEec--cCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeC------CCCcEEEEECcccc
Confidence 578998 8999999 6999999999876643332 21 2478999999999999998 58899999994 66
Q ss_pred EEEe--ccCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 76 IIKR--FNSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 76 ~l~~--~~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
+++. .|...|++++|+|+|+.|+|++.|++|+
T Consensus 389 ~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~ 422 (524)
T 2j04_B 389 AVHPLVSRETTITAIGVSRLHPMVLAGSADGSLI 422 (524)
T ss_dssp CCEEEEECSSCEEEEECCSSCCBCEEEETTTEEE
T ss_pred cceeeecCCCceEEEEeCCCCCeEEEEECCCEEE
Confidence 5544 3578999999999999999999999986
No 70
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.65 E-value=4.1e-16 Score=123.75 Aligned_cols=98 Identities=10% Similarity=0.165 Sum_probs=79.9
Q ss_pred eEec-CCCEEEEEecCCCCeEEEEECC-CceEEeee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcE
Q psy5876 2 KLRM-RGTHIVLAELRDTGSLEFVDTG-DFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKI 76 (143)
Q Consensus 2 ~~SP-dG~~las~~~~~dg~i~iWd~~-~~~~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~ 76 (143)
+|+| ++++|++|+ .||+|++||+. +.+.+..+ |...|++++|+|||++|+||+ .|+.+++||+. |++
T Consensus 212 ~~~~~~~~~l~sgs--~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s------~D~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 212 SINSLNANMFISGS--CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGS------DDGTCRLFDMRTGHQ 283 (380)
T ss_dssp EECSSSCCEEEEEE--TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEEC------SSSCEEEEETTTTEE
T ss_pred EeecCCCCEEEEEE--CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEc------CCCeEEEEECCCCcE
Confidence 4655 899999999 69999999987 33444443 335799999999999999999 69999999995 766
Q ss_pred EEecc---------CCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 77 IKRFN---------SPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 77 l~~~~---------~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
+.... ...|.+++|+|+|+.|++++.|+.|+
T Consensus 284 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~ 323 (380)
T 3iz6_a 284 LQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCY 323 (380)
T ss_dssp EEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEE
T ss_pred EEEecccccccccccCceEEEEECCCCCEEEEEECCCCEE
Confidence 65432 12489999999999999999999876
No 71
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.65 E-value=4.8e-16 Score=125.21 Aligned_cols=99 Identities=12% Similarity=0.110 Sum_probs=82.0
Q ss_pred CeEec-CCCEEEEEecCCCCeEEEEECCCceEEeee--cc--CceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCc
Q psy5876 1 MKLRM-RGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EH--HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGK 75 (143)
Q Consensus 1 i~~SP-dG~~las~~~~~dg~i~iWd~~~~~~~~~~--~~--~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~ 75 (143)
|+|+| ||++|++|+ .||+|++||+.+....... +. ..+.+++|+|+|++|++|+ .|+.|++||++|+
T Consensus 170 l~f~p~~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~------~dg~i~~wd~~~~ 241 (435)
T 4e54_B 170 LKFNPLNTNQFYASS--MEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGD------NVGNVILLNMDGK 241 (435)
T ss_dssp EEECSSCTTEEEEEC--SSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEEC------SSSBEEEEESSSC
T ss_pred EEEeCCCCCEEEEEe--CCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEe------CCCcEeeeccCcc
Confidence 57999 789999999 6999999999876443222 21 2578999999999999999 6999999999998
Q ss_pred EEEec--cCCcEEEEEEeeCCC-eeeecCchhhHH
Q psy5876 76 IIKRF--NSPTFCQLRWRPRPA-SLLSKEQVDKIK 107 (143)
Q Consensus 76 ~l~~~--~~~~v~~l~wsP~~~-~l~s~s~d~~i~ 107 (143)
.+... +...|.+++|+|+++ .+++++.|+.|+
T Consensus 242 ~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~ 276 (435)
T 4e54_B 242 ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVK 276 (435)
T ss_dssp BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred eeEEEecccceEEeeeecCCCceEEEEecCcceee
Confidence 87654 467899999999987 577899999886
No 72
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.65 E-value=4.6e-16 Score=123.55 Aligned_cols=98 Identities=10% Similarity=0.185 Sum_probs=78.2
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCce-----------EEeee--cc------------CceEEEEECCCC--CEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFS-----------VMNAA--EH------------HQATDVEWDPTG--RYVM 53 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~-----------~~~~~--~~------------~~v~~i~wsPdG--~~la 53 (143)
++|||+|++||+|+ .||.|+|||+.+++ .+..+ |. ..|++++|+|++ .+|+
T Consensus 34 v~~s~~g~~la~g~--~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~ 111 (447)
T 3dw8_B 34 VEFNHSGELLATGD--KGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFL 111 (447)
T ss_dssp EEECSSSSEEEEEE--TTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEE
T ss_pred EEECCCCCEEEEEc--CCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEE
Confidence 57999999999999 69999999988765 34433 22 459999999999 8999
Q ss_pred EeecCcceecCCcEEEEeecC-cEE------------------------------------------EeccCCcEEEEEE
Q psy5876 54 SGVSLWKTKADTGYWQWSFQG-KII------------------------------------------KRFNSPTFCQLRW 90 (143)
Q Consensus 54 t~s~~~~~~~D~~i~iW~~~g-~~l------------------------------------------~~~~~~~v~~l~w 90 (143)
+++ .|+.|++|++.. ... ...+...|.+++|
T Consensus 112 s~s------~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 112 LST------NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp EEE------CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred EeC------CCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 999 699999999953 221 1224678999999
Q ss_pred eeCCCeeeecCchhhHH
Q psy5876 91 RPRPASLLSKEQVDKIK 107 (143)
Q Consensus 91 sP~~~~l~s~s~d~~i~ 107 (143)
+|+++.|+++ .|+.|+
T Consensus 186 ~~~~~~l~s~-~d~~i~ 201 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRIN 201 (447)
T ss_dssp CTTSSEEEEE-CSSEEE
T ss_pred cCCCCEEEEe-CCCeEE
Confidence 9999999998 688776
No 73
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.65 E-value=1.9e-15 Score=118.59 Aligned_cols=98 Identities=14% Similarity=0.297 Sum_probs=83.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeee--ccCceEEEEECCCCC-EEEEeecCcceecCCcEEEEeec----
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGR-YVMSGVSLWKTKADTGYWQWSFQ---- 73 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~--~~~~v~~i~wsPdG~-~lat~s~~~~~~~D~~i~iW~~~---- 73 (143)
++|+|+|++|++++ .||.|++||+. ++.+..+ +...|.+++|+|+|+ +|++++ .|+.+++||+.
T Consensus 169 ~~~~~~~~~l~~~~--~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~------~d~~i~iwd~~~~~~ 239 (383)
T 3ei3_B 169 VDVSVSRQMLATGD--STGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSS------VDATVKLWDLRNIKD 239 (383)
T ss_dssp EEEETTTTEEEEEE--TTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEE------TTSEEEEEEGGGCCS
T ss_pred EEECCCCCEEEEEC--CCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEe------CCCEEEEEeCCCCCc
Confidence 47999999999999 69999999995 4555544 346799999999999 899999 69999999995
Q ss_pred -CcEEEec-cCCcEEEEEEee-CCCeeeecCchhhHH
Q psy5876 74 -GKIIKRF-NSPTFCQLRWRP-RPASLLSKEQVDKIK 107 (143)
Q Consensus 74 -g~~l~~~-~~~~v~~l~wsP-~~~~l~s~s~d~~i~ 107 (143)
+.++... +...|.+++|+| +|..|++++.|+.|+
T Consensus 240 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 240 KNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp TTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEE
T ss_pred ccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEE
Confidence 4555544 577999999999 999999999998876
No 74
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.65 E-value=7.9e-16 Score=135.81 Aligned_cols=98 Identities=12% Similarity=0.132 Sum_probs=86.5
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIK 78 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l~ 78 (143)
++|||+|++||+|+ .||+|++||..+.+.+...++ ..|.+++|+| |++|++++ .|+.|+|||+. |+++.
T Consensus 23 lafspdg~~lAsgs--~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s------~D~~v~lWd~~~~~~~~ 93 (902)
T 2oaj_A 23 AAFDFTQNLLAIAT--VTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVIN------AKDTVYVLSLYSQKVLT 93 (902)
T ss_dssp EEEETTTTEEEEEE--TTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEE------TTCEEEEEETTTCSEEE
T ss_pred EEECCCCCEEEEEe--CCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEE------CcCeEEEEECCCCcEEE
Confidence 58999999999999 699999999998887766544 5799999999 99999999 69999999995 77776
Q ss_pred ec-cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 79 RF-NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~-~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.. +...|.+++|+|+++.|++++.|++|+
T Consensus 94 ~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~ 123 (902)
T 2oaj_A 94 TVFVPGKITSIDTDASLDWMLIGLQNGSMI 123 (902)
T ss_dssp EEECSSCEEEEECCTTCSEEEEEETTSCEE
T ss_pred EEcCCCCEEEEEECCCCCEEEEEcCCCcEE
Confidence 55 466899999999999999999999886
No 75
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.65 E-value=1.6e-15 Score=118.49 Aligned_cols=98 Identities=6% Similarity=0.045 Sum_probs=83.7
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-Cc--
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GK-- 75 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~-- 75 (143)
++|+|+| +|++++ .||.|++||+.+++.+..+. ...+.+++|+|+|++|++++ .|+.+++|++. ++
T Consensus 295 ~~~~~~~-~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~------~dg~i~i~~~~~~~~~ 365 (425)
T 1r5m_A 295 ASWVGDD-KVISCS--MDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAF------MDGQVNVYDLKKLNSK 365 (425)
T ss_dssp EEEETTT-EEEEEE--TTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEE------TTSCEEEEECHHHHC-
T ss_pred EEECCCC-EEEEEe--CCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEE------CCCeEEEEECCCCccc
Confidence 4799999 999988 69999999999988777653 35799999999999999999 69999999995 55
Q ss_pred ------------------EEEecc--CC--cEEEEEEeeCCCeeeecCchhhHH
Q psy5876 76 ------------------IIKRFN--SP--TFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 76 ------------------~l~~~~--~~--~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
++.... .. .|.+++|+|+++.|++++.|+.|+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 419 (425)
T 1r5m_A 366 SRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGS 419 (425)
T ss_dssp -------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCE
T ss_pred eeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEE
Confidence 565553 33 999999999999999999998764
No 76
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.65 E-value=1.2e-15 Score=129.57 Aligned_cols=99 Identities=18% Similarity=0.264 Sum_probs=82.2
Q ss_pred CeEecCC-CEEEEEecCCCCeEEEEECCCc-----eEEee--eccCceEEEEECCCCCEEEEeecCcceecCCcEEEEee
Q psy5876 1 MKLRMRG-THIVLAELRDTGSLEFVDTGDF-----SVMNA--AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF 72 (143)
Q Consensus 1 i~~SPdG-~~las~~~~~dg~i~iWd~~~~-----~~~~~--~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~ 72 (143)
|+|+|++ ++|++|+ .||+|++||+.+. ..... .|...|.+++|+|||++|+||+ .|+.|+|||+
T Consensus 388 v~~~~~~~~~l~s~s--~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs------~Dg~v~vwd~ 459 (694)
T 3dm0_A 388 IATPIDNADIIVSAS--RDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGS------WDGELRLWDL 459 (694)
T ss_dssp EECCTTCCSEEEEEE--TTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEE------TTSEEEEEET
T ss_pred EEecCCCCCEEEEEe--CCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEe------CCCcEEEEEC
Confidence 4688875 7899999 6999999998742 22222 3446799999999999999999 6999999999
Q ss_pred c-CcEEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 73 Q-GKIIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 73 ~-g~~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
. |+++... |...|.+++|+|++..|+|++.|++|+
T Consensus 460 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~ 497 (694)
T 3dm0_A 460 AAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIK 497 (694)
T ss_dssp TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred CCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEE
Confidence 5 6666654 577899999999999999999999886
No 77
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.64 E-value=2e-16 Score=129.11 Aligned_cols=99 Identities=16% Similarity=0.230 Sum_probs=79.5
Q ss_pred CeEecCCCEEE----EEecCCCCeEEEEECCCc--------eE---Eeee--ccCceEEEEECCC-CCEEEEeecCccee
Q psy5876 1 MKLRMRGTHIV----LAELRDTGSLEFVDTGDF--------SV---MNAA--EHHQATDVEWDPT-GRYVMSGVSLWKTK 62 (143)
Q Consensus 1 i~~SPdG~~la----s~~~~~dg~i~iWd~~~~--------~~---~~~~--~~~~v~~i~wsPd-G~~lat~s~~~~~~ 62 (143)
++|||+|++|| +++ .|++|+|||+.++ +. +..+ |...|.+++|+|+ +++||+++
T Consensus 98 l~~spdg~~lav~~~sgs--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s------ 169 (434)
T 2oit_A 98 LALSCDNLTLSACMMSSE--YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL------ 169 (434)
T ss_dssp EEECTTSCEEEEEEEETT--TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE------
T ss_pred EEEcCCCCEEEEEEeccC--CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE------
Confidence 57999999999 566 5899999997654 11 2222 2357999999998 89999999
Q ss_pred cCCcEEEEeec-CcEEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 63 ADTGYWQWSFQ-GKIIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 63 ~D~~i~iW~~~-g~~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.|+.+++||+. +..+... +...|.+++|+|+|+.|++++.|+.|+
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~ 217 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVV 217 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEE
T ss_pred CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEE
Confidence 69999999995 5444332 356899999999999999999998875
No 78
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.64 E-value=4.4e-16 Score=122.37 Aligned_cols=99 Identities=13% Similarity=0.213 Sum_probs=82.4
Q ss_pred CeEecCCC-EEEEE----------ecCCCCeEEEEECCCce---EEeeec-cCceEEEEECCCCCEEEEeecCcceecCC
Q psy5876 1 MKLRMRGT-HIVLA----------ELRDTGSLEFVDTGDFS---VMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADT 65 (143)
Q Consensus 1 i~~SPdG~-~las~----------~~~~dg~i~iWd~~~~~---~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~ 65 (143)
++|||+|+ +|+++ + .||.|++||+.+++ .+.... ...|++++|+|||++|++++ .|+
T Consensus 18 ~~~sp~g~~~l~~g~~~g~~~~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------~dg 89 (416)
T 2pm9_A 18 FAWSHDKIPLLVSGTVSGTVDANFS--TDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGAL------DNG 89 (416)
T ss_dssp CCBCSSSSCEEEEBCBSSCCCSSCC--CCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEE------SSS
T ss_pred EeeCCCCCCEEEEEecCcccccccC--CCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEc------cCC
Confidence 58999998 88888 5 58999999998764 343443 35799999999999999999 699
Q ss_pred cEEEEeecC-----cEEEec--cCCcEEEEEEeeC-CCeeeecCchhhHH
Q psy5876 66 GYWQWSFQG-----KIIKRF--NSPTFCQLRWRPR-PASLLSKEQVDKIK 107 (143)
Q Consensus 66 ~i~iW~~~g-----~~l~~~--~~~~v~~l~wsP~-~~~l~s~s~d~~i~ 107 (143)
.+++|++.. +.+... +...|.+++|+|+ +..|++++.|+.|+
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~ 139 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIF 139 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEE
T ss_pred eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEE
Confidence 999999965 355554 4678999999999 89999999998876
No 79
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.63 E-value=5.7e-16 Score=131.68 Aligned_cols=94 Identities=10% Similarity=0.175 Sum_probs=75.0
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCce-------EEeee------ccCceEEEEECCCCCEEEEeecCcceecCCcE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFS-------VMNAA------EHHQATDVEWDPTGRYVMSGVSLWKTKADTGY 67 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~-------~~~~~------~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i 67 (143)
++|||||++||+|+ .||+|+|||+.+++ .+.++ |...|.+++||||| +|+++ .|+++
T Consensus 135 vafSPDG~~LAsgs--~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass------~D~tV 204 (588)
T 2j04_A 135 FEWNPIESSIVVGN--EDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAAL------SNNSV 204 (588)
T ss_dssp EEECSSSSCEEEEE--TTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEE------TTCCE
T ss_pred EEEcCCCCEEEEEc--CCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEe------CCCeE
Confidence 58999999999999 69999999998764 23332 12479999999999 77777 59999
Q ss_pred EEEeecCcEE----Ee---ccCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 68 WQWSFQGKII----KR---FNSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 68 ~iW~~~g~~l----~~---~~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
++|+++++.+ ++ .+...|.+++|+ |+.|++++ +++|+
T Consensus 205 rlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIk 248 (588)
T 2j04_A 205 FSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVH 248 (588)
T ss_dssp EEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEE
T ss_pred EEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEE
Confidence 9999976542 12 345689999999 68999998 47776
No 80
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.63 E-value=2.2e-15 Score=117.92 Aligned_cols=98 Identities=15% Similarity=0.224 Sum_probs=84.6
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--------cCceEEEEECCCCCEEEEeecCcceecC---CcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--------HHQATDVEWDPTGRYVMSGVSLWKTKAD---TGYWQ 69 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--------~~~v~~i~wsPdG~~lat~s~~~~~~~D---~~i~i 69 (143)
++|+|+| +|++++ .||.|++||+.+++.+..+. ...+.+++|+|+|++|++++ .| +.+++
T Consensus 192 ~~~~~~~-~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~------~d~~~g~i~i 262 (397)
T 1sq9_A 192 VDISERG-LIATGF--NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH------DSNSFGCITL 262 (397)
T ss_dssp EEECTTS-EEEEEC--TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE------EETTEEEEEE
T ss_pred EEECCCc-eEEEEe--CCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEe------cCCCCceEEE
Confidence 4799999 999998 68999999999888776653 34799999999999999999 57 89999
Q ss_pred Eee-cCcEEEec---------------cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 70 WSF-QGKIIKRF---------------NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 70 W~~-~g~~l~~~---------------~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
||+ +++.+... +...|.+++|+|+++.|++++.|+.|+
T Consensus 263 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 316 (397)
T 1sq9_A 263 YETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 316 (397)
T ss_dssp EETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred EECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 999 47766654 456899999999999999999998776
No 81
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.63 E-value=1.6e-15 Score=120.22 Aligned_cols=99 Identities=9% Similarity=0.098 Sum_probs=83.8
Q ss_pred CeEecCC-CEEEEEecCCCCeEEEEECCCceEEeee----ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-C
Q psy5876 1 MKLRMRG-THIVLAELRDTGSLEFVDTGDFSVMNAA----EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-G 74 (143)
Q Consensus 1 i~~SPdG-~~las~~~~~dg~i~iWd~~~~~~~~~~----~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g 74 (143)
++|+|+| ++|++++ .||+|++||+.+++.+..+ +...|++++|+|||++|++++ .|+.+++||+. +
T Consensus 137 ~~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~d~~i~iwd~~~~ 208 (402)
T 2aq5_A 137 VAWHPTAQNVLLSAG--CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC------RDKRVRVIEPRKG 208 (402)
T ss_dssp EEECSSBTTEEEEEE--TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE------TTSEEEEEETTTT
T ss_pred EEECcCCCCEEEEEc--CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe------cCCcEEEEeCCCC
Confidence 4799998 6999998 6999999999999887776 335799999999999999999 69999999995 6
Q ss_pred cEEEec---cCC-cEEEEEEeeCCCeeeec---CchhhHH
Q psy5876 75 KIIKRF---NSP-TFCQLRWRPRPASLLSK---EQVDKIK 107 (143)
Q Consensus 75 ~~l~~~---~~~-~v~~l~wsP~~~~l~s~---s~d~~i~ 107 (143)
+.+... +.. .+..+.|+|++..|+++ +.|+.|+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~ 248 (402)
T 2aq5_A 209 TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVA 248 (402)
T ss_dssp EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEE
T ss_pred ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEE
Confidence 666654 223 48999999999999998 7787765
No 82
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.63 E-value=2.9e-15 Score=113.29 Aligned_cols=64 Identities=13% Similarity=0.320 Sum_probs=54.6
Q ss_pred CceEEEEECCCC----CEEEEeecCcceecCCcEEEEeecC---------------------------------------
Q psy5876 38 HQATDVEWDPTG----RYVMSGVSLWKTKADTGYWQWSFQG--------------------------------------- 74 (143)
Q Consensus 38 ~~v~~i~wsPdG----~~lat~s~~~~~~~D~~i~iW~~~g--------------------------------------- 74 (143)
..|++++|+|+| ++|++++ .|+.|++||+..
T Consensus 215 ~~i~~~~~~p~~~~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (351)
T 3f3f_A 215 SLIRSISWAPSIGRWYQLIATGC------KDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKA 288 (351)
T ss_dssp SCEEEEEECCCSSCSSEEEEEEE------TTSCEEEEEEEECC-------------------------------------
T ss_pred cceeEEEECCCCCCcceEEEEEc------CCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceee
Confidence 479999999999 8999999 699999999953
Q ss_pred --------cEEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 75 --------KIIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 75 --------~~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
+++... +...|.+++|+|+++.|++++.|+.|+
T Consensus 289 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~ 331 (351)
T 3f3f_A 289 ELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVR 331 (351)
T ss_dssp --CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEE
T ss_pred eecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEE
Confidence 344433 456899999999999999999999876
No 83
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.63 E-value=1.4e-15 Score=116.53 Aligned_cols=98 Identities=9% Similarity=0.081 Sum_probs=81.8
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCce----EEeee-ccCceEEEEECCCCC-EEEEeecCcceecCCcEEEEee-c
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFS----VMNAA-EHHQATDVEWDPTGR-YVMSGVSLWKTKADTGYWQWSF-Q 73 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~----~~~~~-~~~~v~~i~wsPdG~-~lat~s~~~~~~~D~~i~iW~~-~ 73 (143)
++|+|+|++|++++ .||.|++||+.+++ ..... +...|++++|+|+|+ +|++++ .|+.|++|++ .
T Consensus 17 ~~~s~~~~~l~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~------~dg~i~~wd~~~ 88 (342)
T 1yfq_A 17 IKIIPSKSLLLITS--WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT------VQGEILKVDLIG 88 (342)
T ss_dssp EEEEGGGTEEEEEE--TTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEE------TTSCEEEECSSS
T ss_pred EEEcCCCCEEEEEc--CCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEc------CCCeEEEEEecc
Confidence 57999999999999 69999999988655 33333 346799999999999 999999 6999999999 7
Q ss_pred CcEEEe--c--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 74 GKIIKR--F--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 74 g~~l~~--~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
+..+.. . +...|.+++|+| +..|++++.|+.|+
T Consensus 89 ~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~ 125 (342)
T 1yfq_A 89 SPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIE 125 (342)
T ss_dssp SSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEE
T ss_pred CCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEE
Confidence 554443 3 566899999999 99999999998875
No 84
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.62 E-value=2.2e-15 Score=120.67 Aligned_cols=95 Identities=18% Similarity=0.308 Sum_probs=77.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeee--c-c-CceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-Cc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAA--E-H-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GK 75 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~--~-~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~ 75 (143)
|+||++ +.||+|. |++|+|||..+++++..+ + | ..|++|+|+|||++||+|+ .|+.|+|||+. |+
T Consensus 111 l~wS~~-n~lAvgl---d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs------~Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 111 VDWSSG-NVLAVAL---DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT------SSAEVQLWDVQQQK 180 (420)
T ss_dssp EEECTT-SEEEEEE---TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE------TTSCEEEEETTTTE
T ss_pred EEECCC-CEEEEEe---CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEE------CCCeEEEEEcCCCc
Confidence 579986 5888775 899999999998876543 2 2 4699999999999999999 69999999995 77
Q ss_pred EEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 76 IIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 76 ~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
++... +...+.+++| ++..|++++.|+.++
T Consensus 181 ~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~ 212 (420)
T 4gga_A 181 RLRNMTSHSARVGSLSW--NSYILSSGSRSGHIH 212 (420)
T ss_dssp EEEEECCCSSCEEEEEE--ETTEEEEEETTSEEE
T ss_pred EEEEEeCCCCceEEEee--CCCEEEEEeCCCcee
Confidence 77665 3567777766 567999999998775
No 85
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.62 E-value=3.7e-16 Score=124.85 Aligned_cols=98 Identities=13% Similarity=0.189 Sum_probs=80.0
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEe-----ee--ccCceEEEEECC--------CCCEEEEeecCcceecCCc
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMN-----AA--EHHQATDVEWDP--------TGRYVMSGVSLWKTKADTG 66 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~-----~~--~~~~v~~i~wsP--------dG~~lat~s~~~~~~~D~~ 66 (143)
.++|++++||+++ .|++|+|||+.+++... .+ |...|++++|+| ||++||||| .|++
T Consensus 96 ~~~~~~~~las~~--~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s------~D~t 167 (393)
T 4gq1_A 96 SSPVYSLFLACVC--QDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG------DDCT 167 (393)
T ss_dssp -CCEEEEEEEEEE--TTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE------TTSE
T ss_pred ecCCCCCEEEEEe--CCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE------CCCe
Confidence 3577888999999 69999999998775432 12 346799999998 999999999 6999
Q ss_pred EEEEeec-CcEEEe--ccCCcEEEEEEeeCCC-eeeecCchhhHH
Q psy5876 67 YWQWSFQ-GKIIKR--FNSPTFCQLRWRPRPA-SLLSKEQVDKIK 107 (143)
Q Consensus 67 i~iW~~~-g~~l~~--~~~~~v~~l~wsP~~~-~l~s~s~d~~i~ 107 (143)
++|||+. +..+.. .+...|.+++|+|++. .|++++.|++|+
T Consensus 168 v~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~ 212 (393)
T 4gq1_A 168 LIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIR 212 (393)
T ss_dssp EEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred EEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEE
Confidence 9999994 555443 2477899999999985 799999999887
No 86
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.62 E-value=3.3e-16 Score=123.06 Aligned_cols=99 Identities=4% Similarity=-0.008 Sum_probs=81.5
Q ss_pred CeEec-CCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCC-CEEEEeecCcceecCCcEEEEeecC-c
Q psy5876 1 MKLRM-RGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTG-RYVMSGVSLWKTKADTGYWQWSFQG-K 75 (143)
Q Consensus 1 i~~SP-dG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG-~~lat~s~~~~~~~D~~i~iW~~~g-~ 75 (143)
++|+| +|++|++++ .||.|++||+.+++.+..+. ...|++++|+|+| ++|++++ .|+.|++|++.. .
T Consensus 268 ~~~s~~~~~~l~s~~--~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~------~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 268 LDWCHQDEHLLLSSG--RDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACAS------FDNKIEVQTLQNLT 339 (416)
T ss_dssp EEECSSCSSCEEEEE--SSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECC------SSSEEEEEESCCCC
T ss_pred EEeCCCCCCeEEEEe--CCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEe------cCCcEEEEEccCCC
Confidence 47999 999999999 69999999999988877653 3579999999999 8999999 699999999953 2
Q ss_pred EEEe-------------------------------------ccCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 76 IIKR-------------------------------------FNSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 76 ~l~~-------------------------------------~~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.... ++...+..++|+|+|+.|++++.|+.|+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~ 408 (416)
T 2pm9_A 340 NTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVS 408 (416)
T ss_dssp CSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBC
T ss_pred CCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEE
Confidence 1110 0234677899999999999999998775
No 87
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.62 E-value=6e-15 Score=114.04 Aligned_cols=98 Identities=5% Similarity=-0.077 Sum_probs=81.9
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEEC------------------CCceEEeeec--cCceEEEEECCCCCEEEEeecCcc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDT------------------GDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWK 60 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~------------------~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~ 60 (143)
++|+|+|++|++++ .||.|++||+ .+++.+..+. ...+.+++|+|+|++|++++
T Consensus 148 ~~~~~~~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---- 221 (372)
T 1k8k_C 148 LDWHPNSVLLAAGS--CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS---- 221 (372)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE----
T ss_pred EEEcCCCCEEEEEc--CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEe----
Confidence 47999999999999 6999999995 3566666653 35799999999999999999
Q ss_pred eecCCcEEEEee-cCcEEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 61 TKADTGYWQWSF-QGKIIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 61 ~~~D~~i~iW~~-~g~~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.|+.+++||+ +++++... +...|.+++|+|++..|+++ .|+.|+
T Consensus 222 --~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~ 268 (372)
T 1k8k_C 222 --HDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPV 268 (372)
T ss_dssp --TTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCE
T ss_pred --CCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEE
Confidence 6999999999 57777665 35689999999999988888 666654
No 88
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.62 E-value=3.3e-15 Score=133.03 Aligned_cols=99 Identities=12% Similarity=0.154 Sum_probs=86.2
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l 77 (143)
++|||||++||+|+ .||+|++||+.+++.+.++. ...|++++|+|||++||+++ .|+.|+|||+ +|+++
T Consensus 621 ~~~s~~~~~l~s~~--~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~------~d~~v~vwd~~~~~~~ 692 (1249)
T 3sfz_A 621 ACFSQDGQRIASCG--ADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCS------ADKKVKIWDSATGKLV 692 (1249)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE------TTSEEEEEETTTCCEE
T ss_pred EEECCCCCEEEEEe--CCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEe------CCCeEEEEECCCCceE
Confidence 47999999999999 69999999999988877653 35799999999999999999 6999999999 57777
Q ss_pred Eec--cCCcEEEEEEee--CCCeeeecCchhhHH
Q psy5876 78 KRF--NSPTFCQLRWRP--RPASLLSKEQVDKIK 107 (143)
Q Consensus 78 ~~~--~~~~v~~l~wsP--~~~~l~s~s~d~~i~ 107 (143)
... +...|.+++|+| ++..+++++.|+.|+
T Consensus 693 ~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~ 726 (1249)
T 3sfz_A 693 HTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLK 726 (1249)
T ss_dssp EEEECCSSCEEEEEECSSSSCCEEEEEETTSCEE
T ss_pred EEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEE
Confidence 765 467899999999 556888999998775
No 89
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.62 E-value=3.7e-15 Score=112.47 Aligned_cols=96 Identities=14% Similarity=0.212 Sum_probs=80.5
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l 77 (143)
++|+|+|+ |++++ .||.|++||+.+++.+..+. ...+++++|+|+| +|++++ .|+.+++||+ +++++
T Consensus 190 ~~~~~~~~-~~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~------~dg~v~iwd~~~~~~~ 259 (313)
T 3odt_A 190 LAVVDDGH-FISCS--NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCG------EDRTVRIWSKENGSLK 259 (313)
T ss_dssp EEEEETTE-EEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEE------TTSEEEEECTTTCCEE
T ss_pred EEEcCCCe-EEEcc--CCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEe------cCCEEEEEECCCCcee
Confidence 47999998 88887 59999999999988877653 3579999999999 588888 5999999999 57776
Q ss_pred Eec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 78 KRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 78 ~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
... +...|.+++|+|+++ +++++.|+.|+
T Consensus 260 ~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~ 290 (313)
T 3odt_A 260 QVITLPAISIWSVDCMSNGD-IIVGSSDNLVR 290 (313)
T ss_dssp EEEECSSSCEEEEEECTTSC-EEEEETTSCEE
T ss_pred EEEeccCceEEEEEEccCCC-EEEEeCCCcEE
Confidence 654 466899999999998 67788888876
No 90
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.61 E-value=6.4e-15 Score=112.55 Aligned_cols=99 Identities=15% Similarity=0.186 Sum_probs=80.4
Q ss_pred CeEecC-CCEEEEEecCCCCeEEEEECCCc-----eEEeee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEee
Q psy5876 1 MKLRMR-GTHIVLAELRDTGSLEFVDTGDF-----SVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF 72 (143)
Q Consensus 1 i~~SPd-G~~las~~~~~dg~i~iWd~~~~-----~~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~ 72 (143)
|+|+|+ |++||+|+ .||+|+|||+.+. .+...+ +...|++++|+|||++|++++ .|+.+++|+.
T Consensus 44 v~~sp~~~~~l~S~s--~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~------~d~~i~~~~~ 115 (340)
T 4aow_A 44 IATTPQFPDMILSAS--RDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS------WDGTLRLWDL 115 (340)
T ss_dssp EEECTTCTTEEEEEE--TTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE------TTSEEEEEET
T ss_pred EEEeCCCCCEEEEEc--CCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc------ccccceEEee
Confidence 589998 68999999 6999999997753 233333 346799999999999999999 6999999999
Q ss_pred cCcE-EEe--ccCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 73 QGKI-IKR--FNSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 73 ~g~~-l~~--~~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.... ... .....+..+.++|+++.|++++.|+.++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~ 153 (340)
T 4aow_A 116 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 153 (340)
T ss_dssp TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred cccceeeeecCCCCceeEEEEeecCccceeecCCCeEE
Confidence 6443 332 2366888999999999999999998775
No 91
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.61 E-value=3.4e-15 Score=127.04 Aligned_cols=99 Identities=18% Similarity=0.268 Sum_probs=84.8
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-C-cE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-G-KI 76 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g-~~ 76 (143)
++|||+|++||+++ .||.|++||..+++.+..+. ...|++++|+|+|++|++++ .|+.+++|++. + ..
T Consensus 61 ~~~s~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------~dg~i~vw~~~~~~~~ 132 (814)
T 3mkq_A 61 GKFIARKNWIIVGS--DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS------DDLTVKLWNWENNWAL 132 (814)
T ss_dssp EEEEGGGTEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE------TTSEEEEEEGGGTSEE
T ss_pred EEEeCCCCEEEEEe--CCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEc------CCCEEEEEECCCCceE
Confidence 47999999999999 69999999999988777653 35799999999999999999 69999999996 4 33
Q ss_pred EEec--cCCcEEEEEEee-CCCeeeecCchhhHH
Q psy5876 77 IKRF--NSPTFCQLRWRP-RPASLLSKEQVDKIK 107 (143)
Q Consensus 77 l~~~--~~~~v~~l~wsP-~~~~l~s~s~d~~i~ 107 (143)
.... +...|.+++|+| ++..|++++.|+.|+
T Consensus 133 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~ 166 (814)
T 3mkq_A 133 EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (814)
T ss_dssp EEEEECCSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred EEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEE
Confidence 3333 467899999999 899999999998875
No 92
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.60 E-value=1.4e-15 Score=116.72 Aligned_cols=99 Identities=13% Similarity=0.298 Sum_probs=80.3
Q ss_pred CeEec---CCCEEEEEecCCCCeEEEEECCCceEEee-------eccCceEEEEECCCCC-EEEEeecCcceecCCcEEE
Q psy5876 1 MKLRM---RGTHIVLAELRDTGSLEFVDTGDFSVMNA-------AEHHQATDVEWDPTGR-YVMSGVSLWKTKADTGYWQ 69 (143)
Q Consensus 1 i~~SP---dG~~las~~~~~dg~i~iWd~~~~~~~~~-------~~~~~v~~i~wsPdG~-~lat~s~~~~~~~D~~i~i 69 (143)
++|+| +|++|++++ .||.|++||+.+++.+.. .+...|++++|+|+|+ +|++++ .|+.+++
T Consensus 215 ~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~------~dg~i~i 286 (357)
T 3i2n_A 215 LEFDRKDISMNKLVATS--LEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAG------GAGGLHL 286 (357)
T ss_dssp EEESCSSSSCCEEEEEE--STTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEE------TTSEEEE
T ss_pred EEcCCCCCCCCEEEEEC--CCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEe------CCCcEEE
Confidence 47999 999999998 699999999886543222 2345799999999999 899999 6999999
Q ss_pred Eeec-C-------------------cEEEec--cCCcEEEEEEeeCCCeee-ecCchhhHH
Q psy5876 70 WSFQ-G-------------------KIIKRF--NSPTFCQLRWRPRPASLL-SKEQVDKIK 107 (143)
Q Consensus 70 W~~~-g-------------------~~l~~~--~~~~v~~l~wsP~~~~l~-s~s~d~~i~ 107 (143)
||+. + +++... +...|.+++|+|+++.|+ |++.|+.|+
T Consensus 287 wd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~ 347 (357)
T 3i2n_A 287 WKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVR 347 (357)
T ss_dssp EEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred eecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEE
Confidence 9995 2 234333 467899999999999998 899998775
No 93
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.60 E-value=5.9e-15 Score=117.13 Aligned_cols=97 Identities=8% Similarity=0.108 Sum_probs=77.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCC-ceEEee-------e--ccCceEEEEECCCC-CEEEEeecCcceecCCcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGD-FSVMNA-------A--EHHQATDVEWDPTG-RYVMSGVSLWKTKADTGYWQ 69 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~-~~~~~~-------~--~~~~v~~i~wsPdG-~~lat~s~~~~~~~D~~i~i 69 (143)
++|+|+|++|++|. ||+|++||+.+ .+.+.. + +...|++++|+|+| ++|++++ .|+.|++
T Consensus 183 ~~~~~~~~~l~s~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~------~dg~i~i 253 (447)
T 3dw8_B 183 ISINSDYETYLSAD---DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSS------SKGTIRL 253 (447)
T ss_dssp EEECTTSSEEEEEC---SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEE------TTSCEEE
T ss_pred EEEcCCCCEEEEeC---CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEe------CCCeEEE
Confidence 47999999999973 89999999984 444432 1 23569999999999 9999999 6999999
Q ss_pred Eeec-CcE----EEec--cCC------------cEEEEEEeeCCCeeeecCchhhHH
Q psy5876 70 WSFQ-GKI----IKRF--NSP------------TFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 70 W~~~-g~~----l~~~--~~~------------~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
||+. ++. +..+ +.. .|.+++|+|+|+.|++++. +.|+
T Consensus 254 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~ 309 (447)
T 3dw8_B 254 CDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVK 309 (447)
T ss_dssp EETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEE
T ss_pred EECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEE
Confidence 9995 553 3333 233 8999999999999999988 7765
No 94
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.59 E-value=3.7e-15 Score=120.31 Aligned_cols=99 Identities=10% Similarity=0.088 Sum_probs=81.2
Q ss_pred CeEecCCCEE-EEEecCCCCeEEEEECC--CceEEeee----ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec
Q psy5876 1 MKLRMRGTHI-VLAELRDTGSLEFVDTG--DFSVMNAA----EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ 73 (143)
Q Consensus 1 i~~SPdG~~l-as~~~~~dg~i~iWd~~--~~~~~~~~----~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~ 73 (143)
++|||+|++| ++++ .||.|++||+. +++.+..+ +...|++++|+|||++|++++ .|+.+++|++.
T Consensus 108 ~~~s~d~~~l~~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~------~~g~v~~~~~~ 179 (450)
T 2vdu_B 108 LRLTSDESRLIACAD--SDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIAD------KFGDVYSIDIN 179 (450)
T ss_dssp EEECTTSSEEEEEEG--GGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEE------TTSEEEEEETT
T ss_pred EEEcCCCCEEEEEEC--CCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEe------CCCcEEEEecC
Confidence 4799999997 7777 58999999988 76655543 235799999999999999999 58999999984
Q ss_pred -CcEEE----e--ccCCcEEEEEEeeC---CCeeeecCchhhHH
Q psy5876 74 -GKIIK----R--FNSPTFCQLRWRPR---PASLLSKEQVDKIK 107 (143)
Q Consensus 74 -g~~l~----~--~~~~~v~~l~wsP~---~~~l~s~s~d~~i~ 107 (143)
++... . .+...|.+++|+|+ ++.|++++.|+.|+
T Consensus 180 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~ 223 (450)
T 2vdu_B 180 SIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIK 223 (450)
T ss_dssp SCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEE
T ss_pred CcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEE
Confidence 44322 2 34678999999999 99999999998876
No 95
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.59 E-value=7.6e-15 Score=112.45 Aligned_cols=96 Identities=17% Similarity=0.152 Sum_probs=80.1
Q ss_pred CeEec-CCCEEEEEecCCCCeEEEEECCCc------eEEeee--ccC---------ceEEEEECCCCCEEEEeecCccee
Q psy5876 1 MKLRM-RGTHIVLAELRDTGSLEFVDTGDF------SVMNAA--EHH---------QATDVEWDPTGRYVMSGVSLWKTK 62 (143)
Q Consensus 1 i~~SP-dG~~las~~~~~dg~i~iWd~~~~------~~~~~~--~~~---------~v~~i~wsPdG~~lat~s~~~~~~ 62 (143)
++|+| +|++|++++ .||.|++||.+.. +.+..+ +.. .|++++|+|+|++|++++
T Consensus 199 i~~~~~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~------ 270 (342)
T 1yfq_A 199 VALLPKEQEGYACSS--IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG------ 270 (342)
T ss_dssp EEECSGGGCEEEEEE--TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE------
T ss_pred EEECCCCCCEEEEEe--cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEec------
Confidence 47999 999999999 6999999998765 433333 212 899999999999999999
Q ss_pred cCCcEEEEeec-CcEEEec--c-CCcEEEEEEeeCCCeeeecCchhhH
Q psy5876 63 ADTGYWQWSFQ-GKIIKRF--N-SPTFCQLRWRPRPASLLSKEQVDKI 106 (143)
Q Consensus 63 ~D~~i~iW~~~-g~~l~~~--~-~~~v~~l~wsP~~~~l~s~s~d~~i 106 (143)
.|+.|++||+. ++++... + ...|.+++ |+++.|++++.|+.+
T Consensus 271 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~ 316 (342)
T 1yfq_A 271 SDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTF 316 (342)
T ss_dssp TTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHH
T ss_pred CCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCcc
Confidence 69999999995 7777665 3 56899999 999999999999984
No 96
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.59 E-value=7.3e-15 Score=113.35 Aligned_cols=94 Identities=14% Similarity=0.216 Sum_probs=75.7
Q ss_pred CCCEEEEEecCCCCeEEEEECCCce----EEeee--ccCceEEEEECCC---CCEEEEeecCcceecCCcEEEEeecCc-
Q psy5876 6 RGTHIVLAELRDTGSLEFVDTGDFS----VMNAA--EHHQATDVEWDPT---GRYVMSGVSLWKTKADTGYWQWSFQGK- 75 (143)
Q Consensus 6 dG~~las~~~~~dg~i~iWd~~~~~----~~~~~--~~~~v~~i~wsPd---G~~lat~s~~~~~~~D~~i~iW~~~g~- 75 (143)
+|++|++++ .||.|++||+.+++ .+..+ +...|++++|+|+ |++|++++ .|+.+++||+...
T Consensus 171 ~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~------~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 171 ESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS------QDRTCIIWTQDNEQ 242 (379)
T ss_dssp TTCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE------TTSCEEEEEESSTT
T ss_pred CCCEEEEEe--CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe------CCCEEEEEeCCCCC
Confidence 799999999 69999999986542 33333 3357999999999 89999999 6999999999632
Q ss_pred -----EEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 76 -----IIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 76 -----~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.+... +...|.+++|+|+|+.|++++.|+.|+
T Consensus 243 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~ 281 (379)
T 3jrp_A 243 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVT 281 (379)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEE
T ss_pred ccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEE
Confidence 22222 356899999999999999999998775
No 97
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.59 E-value=5.9e-15 Score=113.25 Aligned_cols=98 Identities=11% Similarity=0.207 Sum_probs=81.5
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeec-cCceEEEEECC---CCCEEEEeecCcceecCCcEEEEeec-CcE
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDP---TGRYVMSGVSLWKTKADTGYWQWSFQ-GKI 76 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~-~~~v~~i~wsP---dG~~lat~s~~~~~~~D~~i~iW~~~-g~~ 76 (143)
+|+|+|++|++++ .||.|++||+.+++...... ...+.+++|+| +|++|++++ .|+.+++||+. ++.
T Consensus 175 ~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~------~dg~i~i~d~~~~~~ 246 (357)
T 3i2n_A 175 AYNQEERVVCAGY--DNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATS------LEGKFHVFDMRTQHP 246 (357)
T ss_dssp CCC-CCCEEEEEE--TTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEE------STTEEEEEEEEEEET
T ss_pred ccCCCCCEEEEEc--cCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEEC------CCCeEEEEeCcCCCc
Confidence 4889999999998 68999999999988765543 46799999999 999999999 69999999995 332
Q ss_pred EEe-------ccCCcEEEEEEeeCCC-eeeecCchhhHH
Q psy5876 77 IKR-------FNSPTFCQLRWRPRPA-SLLSKEQVDKIK 107 (143)
Q Consensus 77 l~~-------~~~~~v~~l~wsP~~~-~l~s~s~d~~i~ 107 (143)
+.. .+...|.+++|+|+++ .|++++.|+.|+
T Consensus 247 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 285 (357)
T 3i2n_A 247 TKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLH 285 (357)
T ss_dssp TTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred ccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEE
Confidence 211 3567899999999999 899999999876
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.58 E-value=5.4e-15 Score=117.84 Aligned_cols=97 Identities=8% Similarity=0.148 Sum_probs=82.0
Q ss_pred EecCCCEEEEEecCCCCeEEEEECCCceEEeeec----cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEE
Q psy5876 3 LRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE----HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 77 (143)
Q Consensus 3 ~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~----~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l 77 (143)
++|+|++|++++ .||.|++||+.+++++..+. ...|++++|+|+|++|++|+ .|+.+++||+. ++++
T Consensus 178 ~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~------~dg~i~iwd~~~~~~~ 249 (437)
T 3gre_A 178 VNEEKSLLVALT--NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGT------TRGIIDIWDIRFNVLI 249 (437)
T ss_dssp ECSSCEEEEEEE--TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEE------TTSCEEEEETTTTEEE
T ss_pred EcCCCCEEEEEe--CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEc------CCCeEEEEEcCCccEE
Confidence 678999999999 69999999999988776653 35799999999999999999 69999999995 7777
Q ss_pred Eec---cCCcEEEEEEee----CCCeeeecCchhhHH
Q psy5876 78 KRF---NSPTFCQLRWRP----RPASLLSKEQVDKIK 107 (143)
Q Consensus 78 ~~~---~~~~v~~l~wsP----~~~~l~s~s~d~~i~ 107 (143)
..+ +...|.+++|+| ++..|++++.|+.|+
T Consensus 250 ~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~ 286 (437)
T 3gre_A 250 RSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLT 286 (437)
T ss_dssp EEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEE
T ss_pred EEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEE
Confidence 654 245799996654 678999999999876
No 99
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.58 E-value=2.3e-14 Score=117.56 Aligned_cols=94 Identities=14% Similarity=0.160 Sum_probs=79.8
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCc----eEEeeec--cCc-eEEEEECC--CCCEEEEeecCcceecCCcEEEEe
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDF----SVMNAAE--HHQ-ATDVEWDP--TGRYVMSGVSLWKTKADTGYWQWS 71 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~----~~~~~~~--~~~-v~~i~wsP--dG~~lat~s~~~~~~~D~~i~iW~ 71 (143)
++|||||++||+++ ++.|++||+.++ +.+..+. ... |++++|+| ||++||+++ .|+.+++|+
T Consensus 24 ~~~spdg~~l~~~~---~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~------~dg~v~vw~ 94 (615)
T 1pgu_A 24 LSYDPTTNAIAYPC---GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD------ESGKVIVWG 94 (615)
T ss_dssp CEEETTTTEEEEEE---TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE------TTSEEEEEE
T ss_pred EEECCCCCEEEEec---CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEec------CCCEEEEEe
Confidence 58999999999998 789999999987 6655543 357 99999999 999999999 699999999
Q ss_pred ec-C--------cEEEec--cCCcEEEEEEeeCCCeeeecCch
Q psy5876 72 FQ-G--------KIIKRF--NSPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 72 ~~-g--------~~l~~~--~~~~v~~l~wsP~~~~l~s~s~d 103 (143)
+. | +++... +...|.+++|+|+++.|++++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~ 137 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG 137 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECC
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccC
Confidence 93 4 444443 46789999999999999999876
No 100
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.57 E-value=2e-14 Score=111.87 Aligned_cols=99 Identities=14% Similarity=0.134 Sum_probs=76.0
Q ss_pred CeEecCCCE-EEEEecCCCCeEEEEECCCce-EEee-----------------eccCceEEEEECCCCCEEEEeecCcce
Q psy5876 1 MKLRMRGTH-IVLAELRDTGSLEFVDTGDFS-VMNA-----------------AEHHQATDVEWDPTGRYVMSGVSLWKT 61 (143)
Q Consensus 1 i~~SPdG~~-las~~~~~dg~i~iWd~~~~~-~~~~-----------------~~~~~v~~i~wsPdG~~lat~s~~~~~ 61 (143)
++|+|+|++ |++++ .||.|++||+.+.. .+.. .+...|.+++|+|+|++|++++.
T Consensus 192 ~~~~~~~~~ll~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---- 265 (408)
T 4a11_B 192 VSWSPRYDYILATAS--ADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT---- 265 (408)
T ss_dssp EEECSSCTTEEEEEE--TTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET----
T ss_pred EEECCCCCcEEEEEc--CCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecC----
Confidence 479999995 78888 69999999987643 1111 12357999999999999999994
Q ss_pred ecCCcEEEEeec------------------------------------------------CcEEEec--cCCcEEEEEEe
Q psy5876 62 KADTGYWQWSFQ------------------------------------------------GKIIKRF--NSPTFCQLRWR 91 (143)
Q Consensus 62 ~~D~~i~iW~~~------------------------------------------------g~~l~~~--~~~~v~~l~ws 91 (143)
|+.+++||+. ++++... +...|.+++|+
T Consensus 266 --dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s 343 (408)
T 4a11_B 266 --DNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQ 343 (408)
T ss_dssp --TSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEE
T ss_pred --CCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEc
Confidence 5555555542 3444443 35689999999
Q ss_pred eCCCeeeecCchhhHH
Q psy5876 92 PRPASLLSKEQVDKIK 107 (143)
Q Consensus 92 P~~~~l~s~s~d~~i~ 107 (143)
|+++.|++++.|+.|+
T Consensus 344 ~~~~~l~s~~~dg~i~ 359 (408)
T 4a11_B 344 SNFQELYSGSRDCNIL 359 (408)
T ss_dssp TTTTEEEEEETTSCEE
T ss_pred CCCCEEEEECCCCeEE
Confidence 9999999999999887
No 101
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.57 E-value=6.5e-15 Score=113.17 Aligned_cols=97 Identities=14% Similarity=0.238 Sum_probs=81.4
Q ss_pred CeEec-CCCEEEEEecCCCCeEEEEECCCceEEeee-----ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-
Q psy5876 1 MKLRM-RGTHIVLAELRDTGSLEFVDTGDFSVMNAA-----EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ- 73 (143)
Q Consensus 1 i~~SP-dG~~las~~~~~dg~i~iWd~~~~~~~~~~-----~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~- 73 (143)
++|+| +|++|++++ .||.|++||+.+++.+..+ +...|.+++|+|+|++|++++ .|+.+++||+.
T Consensus 121 ~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~dg~i~i~d~~~ 192 (366)
T 3k26_A 121 LKFHPRDPNLLLSVS--KDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCG------MDHSLKLWRINS 192 (366)
T ss_dssp EEECSSCTTEEEEEE--TTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEE------TTSCEEEEESCS
T ss_pred EEECCCCCCEEEEEe--CCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEec------CCCCEEEEECCC
Confidence 47999 999999999 6999999999998877765 235799999999999999999 69999999996
Q ss_pred CcEEEec------------------------------cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 74 GKIIKRF------------------------------NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 74 g~~l~~~------------------------------~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
++.+... +...|.+++|+ +..|++++.|+.|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~ 254 (366)
T 3k26_A 193 KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIV 254 (366)
T ss_dssp HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEE
T ss_pred CccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEE
Confidence 4332211 56689999999 77999999998876
No 102
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.57 E-value=5e-15 Score=118.25 Aligned_cols=99 Identities=11% Similarity=0.132 Sum_probs=77.0
Q ss_pred CeEec--------CCCEEEEEecCCCCeEEEEECCCceEEee-e-ccCceEEEEECCCCC-EEEEeecCcceecCCcEEE
Q psy5876 1 MKLRM--------RGTHIVLAELRDTGSLEFVDTGDFSVMNA-A-EHHQATDVEWDPTGR-YVMSGVSLWKTKADTGYWQ 69 (143)
Q Consensus 1 i~~SP--------dG~~las~~~~~dg~i~iWd~~~~~~~~~-~-~~~~v~~i~wsPdG~-~lat~s~~~~~~~D~~i~i 69 (143)
|+|+| ||++||+++ .|++|+|||+.++..+.. . ++..+.+++|+|+|. +|++++ .|+.|++
T Consensus 142 v~~~p~~~~~~~~d~~~las~s--~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~------~d~~v~~ 213 (393)
T 4gq1_A 142 IDIADVYSADNRLAEQVIASVG--DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGE------RNGNIRI 213 (393)
T ss_dssp EEEEEEECTTCSEEEEEEEEEE--TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEE------TTSEEEE
T ss_pred EEEccccccccCCCCCEEEEEE--CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecC------CCCEEEE
Confidence 47888 999999999 699999999877655433 2 456899999999985 799998 6999999
Q ss_pred Eeec-CcEEEe---------------------------ccCCcEEEEEEe-eCCCeeeecCchhhHH
Q psy5876 70 WSFQ-GKIIKR---------------------------FNSPTFCQLRWR-PRPASLLSKEQVDKIK 107 (143)
Q Consensus 70 W~~~-g~~l~~---------------------------~~~~~v~~l~ws-P~~~~l~s~s~d~~i~ 107 (143)
||+. ++.... .+...+..+.|. |+|..|++++.|+.++
T Consensus 214 wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~ 280 (393)
T 4gq1_A 214 FDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWL 280 (393)
T ss_dssp EETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEE
T ss_pred EECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEE
Confidence 9984 433211 123457788886 8999999999999876
No 103
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.56 E-value=2.1e-14 Score=114.06 Aligned_cols=101 Identities=14% Similarity=0.277 Sum_probs=81.7
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCC-EEEEeecCcceecCCcEEEEee-cCcE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGR-YVMSGVSLWKTKADTGYWQWSF-QGKI 76 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~-~lat~s~~~~~~~D~~i~iW~~-~g~~ 76 (143)
++|+|+|++|++++ .||.|++||+.+++.+..+. ...|.+++|+|+|. ++++++.. .|+.+++||+ +++.
T Consensus 223 ~~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs----~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 223 LAWRSDGLQLASGG--NDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT----MDKQIHFWNAATGAR 296 (401)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCT----TTCEEEEEETTTCCE
T ss_pred EEEcCCCCEEEEEe--CCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCC----CCCEEEEEECCCCCE
Confidence 47999999999999 68999999999887776653 35799999999886 45554311 4899999999 4777
Q ss_pred EEecc-CCcEEEEEEeeCCCeeee--cCchhhHH
Q psy5876 77 IKRFN-SPTFCQLRWRPRPASLLS--KEQVDKIK 107 (143)
Q Consensus 77 l~~~~-~~~v~~l~wsP~~~~l~s--~s~d~~i~ 107 (143)
+.... ...|.+++|+|+++.|++ ++.|+.|+
T Consensus 297 ~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~ 330 (401)
T 4aez_A 297 VNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLS 330 (401)
T ss_dssp EEEEECSSCEEEEEECSSSSEEEEEECTTTCEEE
T ss_pred EEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEE
Confidence 76653 678999999999999999 55788765
No 104
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.56 E-value=1.5e-14 Score=116.77 Aligned_cols=98 Identities=15% Similarity=0.182 Sum_probs=83.3
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEe----e--eccCceEEEEECCC---CCEEEEeecCcceecCCcEEEEe
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMN----A--AEHHQATDVEWDPT---GRYVMSGVSLWKTKADTGYWQWS 71 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~----~--~~~~~v~~i~wsPd---G~~lat~s~~~~~~~D~~i~iW~ 71 (143)
++|+|+|++|++++ .+|.|.+|++.+++... . .+...|++++|+|| |++|++++ .|+.|++||
T Consensus 155 ~~~sp~~~~l~~~~--~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~------~d~~i~vwd 226 (450)
T 2vdu_B 155 ISIAEDDTTVIIAD--KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSD------RDEHIKISH 226 (450)
T ss_dssp EEECTTSSEEEEEE--TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEE------TTSCEEEEE
T ss_pred EEEcCCCCEEEEEe--CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEc------CCCcEEEEE
Confidence 57999999999998 58999999988765432 2 23467999999999 99999999 699999999
Q ss_pred ec-CcEEEe-c--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 72 FQ-GKIIKR-F--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 72 ~~-g~~l~~-~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
+. ++++.. . +...|.+++|+ ++..|++++.|+.|+
T Consensus 227 ~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~ 265 (450)
T 2vdu_B 227 YPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIF 265 (450)
T ss_dssp ESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEE
T ss_pred CCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEE
Confidence 95 776655 2 46789999999 999999999999876
No 105
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.56 E-value=3.1e-14 Score=126.76 Aligned_cols=99 Identities=10% Similarity=0.152 Sum_probs=86.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECC--CCCEEEEeecCcceecCCcEEEEeec-Cc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDP--TGRYVMSGVSLWKTKADTGYWQWSFQ-GK 75 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsP--dG~~lat~s~~~~~~~D~~i~iW~~~-g~ 75 (143)
++|||||++||+++ .||+|++||+.+++.+.++. ...|.+++|+| ++.++++++ .|+.+++||+. |+
T Consensus 663 ~~~s~~~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~------~d~~v~vwd~~~~~ 734 (1249)
T 3sfz_A 663 CAFSSDDSYIATCS--ADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGS------NDFFLKLWDLNQKE 734 (1249)
T ss_dssp EEECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEE------TTSCEEEEETTSSS
T ss_pred EEEecCCCEEEEEe--CCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEe------CCCeEEEEECCCcc
Confidence 47999999999999 69999999999998877653 35799999999 556899999 69999999995 77
Q ss_pred EEEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 76 IIKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 76 ~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
++... +...|.+++|+|+++.|++++.|+.|+
T Consensus 735 ~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~ 768 (1249)
T 3sfz_A 735 CRNTMFGHTNSVNHCRFSPDDELLASCSADGTLR 768 (1249)
T ss_dssp EEEEECCCSSCEEEEEECSSTTEEEEEESSSEEE
T ss_pred hhheecCCCCCEEEEEEecCCCEEEEEECCCeEE
Confidence 77654 467899999999999999999999876
No 106
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.56 E-value=4.3e-14 Score=106.99 Aligned_cols=102 Identities=13% Similarity=0.249 Sum_probs=81.2
Q ss_pred eEecCCCEEEE-EecCCCCeEEEEECCCceEEeee-ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEEE
Q psy5876 2 KLRMRGTHIVL-AELRDTGSLEFVDTGDFSVMNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIK 78 (143)
Q Consensus 2 ~~SPdG~~las-~~~~~dg~i~iWd~~~~~~~~~~-~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l~ 78 (143)
.|+|++..++. ++-+.+++|++||.......... +...+..++|+|+++++++++.. .|+.|+|||+ +|+++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~----~d~~i~iwd~~~~~~~~ 278 (318)
T 4ggc_A 203 AWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF----AQNQLVIWKYPTMAKVA 278 (318)
T ss_dssp EECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECT----TTCCEEEEETTTCCEEE
T ss_pred EecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEc----CCCEEEEEECCCCcEEE
Confidence 57787775542 21116899999999887765554 34679999999999999887632 5899999999 588887
Q ss_pred ec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 79 RF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.+ |.+.|.+++|+|+|+.|+|++.|++||
T Consensus 279 ~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~ 309 (318)
T 4ggc_A 279 ELKGHTSRVLSLTMSPDGATVASAAADETLR 309 (318)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred EEcCCCCCEEEEEEcCCCCEEEEEecCCeEE
Confidence 65 477999999999999999999999886
No 107
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.55 E-value=1.7e-14 Score=124.47 Aligned_cols=99 Identities=16% Similarity=0.326 Sum_probs=83.3
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECC--CceEEeeec--cCceEEEEECCC--CCEEEEeecCcceecCCcEEEEeec-
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTG--DFSVMNAAE--HHQATDVEWDPT--GRYVMSGVSLWKTKADTGYWQWSFQ- 73 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~--~~~~~~~~~--~~~v~~i~wsPd--G~~lat~s~~~~~~~D~~i~iW~~~- 73 (143)
++|||+|++|++|+ .||+|++||+. +++.+..+. ...|++++|+|+ |++|++|+ .|+.|++||+.
T Consensus 15 l~~s~dg~~latg~--~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s------~Dg~I~vwd~~~ 86 (753)
T 3jro_A 15 AVLDYYGKRLATCS--SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS------YDGKVLIWKEEN 86 (753)
T ss_dssp ECCCSSSCCEEEEE--TTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEE------TTSCEEEEEEET
T ss_pred EEECCCCCeEEEEE--CCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEe------CCCeEEEEECCC
Confidence 47999999999999 69999999987 555555543 357999999998 99999999 69999999996
Q ss_pred Cc--EEEec--cCCcEEEEEEeeC--CCeeeecCchhhHH
Q psy5876 74 GK--IIKRF--NSPTFCQLRWRPR--PASLLSKEQVDKIK 107 (143)
Q Consensus 74 g~--~l~~~--~~~~v~~l~wsP~--~~~l~s~s~d~~i~ 107 (143)
|+ .+... +...|.+++|+|+ +..+++++.|+.|+
T Consensus 87 ~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~ 126 (753)
T 3jro_A 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 126 (753)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred CcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEE
Confidence 43 33333 4678999999999 99999999999876
No 108
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.55 E-value=2.6e-14 Score=115.00 Aligned_cols=99 Identities=10% Similarity=0.279 Sum_probs=80.0
Q ss_pred CeEecCCC-EEEEEecCCCCeEEEEECCC-ceEEeee--ccCceEEEEECCCCC-EEEEeecCcceecCCcEEEEeecC-
Q psy5876 1 MKLRMRGT-HIVLAELRDTGSLEFVDTGD-FSVMNAA--EHHQATDVEWDPTGR-YVMSGVSLWKTKADTGYWQWSFQG- 74 (143)
Q Consensus 1 i~~SPdG~-~las~~~~~dg~i~iWd~~~-~~~~~~~--~~~~v~~i~wsPdG~-~lat~s~~~~~~~D~~i~iW~~~g- 74 (143)
++|+|+|+ +|++|+ .||+|++||+.+ .+.+..+ +...|++++|+|+|+ +|++++ .|+.|+|||+..
T Consensus 283 i~~~p~~~~~l~tg~--~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~------~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 283 LSFNPYSEFILATGS--ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG------TDRRLHVWDLSKI 354 (430)
T ss_dssp EEECSSCTTEEEEEE--TTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEE------TTSCCEEEEGGGT
T ss_pred EEeCCCCCCEEEEEe--CCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEe------CCCcEEEEeCCCC
Confidence 57999998 577888 699999999886 3344443 346899999999996 588888 699999999954
Q ss_pred --------------cEEEec--cCCcEEEEEEeeCCC-eeeecCchhhHH
Q psy5876 75 --------------KIIKRF--NSPTFCQLRWRPRPA-SLLSKEQVDKIK 107 (143)
Q Consensus 75 --------------~~l~~~--~~~~v~~l~wsP~~~-~l~s~s~d~~i~ 107 (143)
.++... +...|.+++|+|+++ .|++++.|+.|+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~ 404 (430)
T 2xyi_A 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQ 404 (430)
T ss_dssp TCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred ccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEE
Confidence 555544 356899999999999 899999998776
No 109
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.55 E-value=1.7e-14 Score=114.88 Aligned_cols=99 Identities=5% Similarity=0.004 Sum_probs=79.3
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECC---CceEEeeec--------------cCceEEEE--ECCCCCEEEEeecCcce
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTG---DFSVMNAAE--------------HHQATDVE--WDPTGRYVMSGVSLWKT 61 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~---~~~~~~~~~--------------~~~v~~i~--wsPdG~~lat~s~~~~~ 61 (143)
++|+|+|++|++++ .||+|++||++ +++.+.... ...+.++. |+|||++|++++
T Consensus 117 ~~~~~~~~~l~s~s--~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----- 189 (437)
T 3gre_A 117 ITMIPNFDAFAVSS--KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT----- 189 (437)
T ss_dssp EEECTTSSEEEEEE--TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE-----
T ss_pred EEEeCCCCEEEEEe--CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe-----
Confidence 57999999999999 69999999985 443332221 22455555 778999999999
Q ss_pred ecCCcEEEEee-cCcEEEec----cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 62 KADTGYWQWSF-QGKIIKRF----NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 62 ~~D~~i~iW~~-~g~~l~~~----~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.|+.|++||+ +++++... +...|.+++|+|++..|++++.|+.|+
T Consensus 190 -~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~ 239 (437)
T 3gre_A 190 -NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIID 239 (437)
T ss_dssp -TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEE
T ss_pred -CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEE
Confidence 6999999999 47776654 457899999999999999999999876
No 110
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.55 E-value=4.1e-14 Score=112.40 Aligned_cols=97 Identities=15% Similarity=0.314 Sum_probs=82.9
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec--CcE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ--GKI 76 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~--g~~ 76 (143)
++|+|+|++|++|+ .||.|++||+.+++.+..+. ...|.+++| ++++|++++ .|+.+++||+. +..
T Consensus 140 v~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~------~dg~i~i~d~~~~~~~ 209 (401)
T 4aez_A 140 VKWSHDGSFLSVGL--GNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGS------RSGAIHHHDVRIANHQ 209 (401)
T ss_dssp EEECTTSSEEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEE------TTSEEEEEETTSSSCE
T ss_pred EEECCCCCEEEEEC--CCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEc------CCCCEEEEecccCcce
Confidence 57999999999998 69999999999888777653 357999999 567999999 69999999996 444
Q ss_pred EEec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 77 IKRF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 77 l~~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
+... +...|.+++|+|+++.|++++.|+.|+
T Consensus 210 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~ 242 (401)
T 4aez_A 210 IGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQ 242 (401)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Confidence 4443 577899999999999999999999876
No 111
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.55 E-value=2.2e-14 Score=109.99 Aligned_cols=89 Identities=8% Similarity=0.039 Sum_probs=72.4
Q ss_pred EEEEecCCCCeEEEEECCCc---eEEeee--ccC------------ceEEEEECCCCCEEEEeecCcceecCCcEEEEee
Q psy5876 10 IVLAELRDTGSLEFVDTGDF---SVMNAA--EHH------------QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF 72 (143)
Q Consensus 10 las~~~~~dg~i~iWd~~~~---~~~~~~--~~~------------~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~ 72 (143)
+++++ .||.|++||.... +.+..+ +.. .|++++|+|||++|++++ .|+.|++||+
T Consensus 231 ~~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~------~dg~i~iwd~ 302 (368)
T 3mmy_A 231 FALGS--IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG------SDGRFSFWDK 302 (368)
T ss_dssp EEEEE--TTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE------TTSCEEEEET
T ss_pred EEEec--CCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc------cCCeEEEEEC
Confidence 88888 6999999998865 222222 111 699999999999999999 6999999999
Q ss_pred c-CcEEEecc--CCcEEEEEEeeCCCeeeecCchhhH
Q psy5876 73 Q-GKIIKRFN--SPTFCQLRWRPRPASLLSKEQVDKI 106 (143)
Q Consensus 73 ~-g~~l~~~~--~~~v~~l~wsP~~~~l~s~s~d~~i 106 (143)
. ++++.... ...|.+++|+|+|+.|++++.|+..
T Consensus 303 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~ 339 (368)
T 3mmy_A 303 DARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWS 339 (368)
T ss_dssp TTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCST
T ss_pred CCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccc
Confidence 5 77777653 6789999999999999999987643
No 112
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.54 E-value=7.7e-14 Score=109.25 Aligned_cols=101 Identities=14% Similarity=0.185 Sum_probs=80.7
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec-cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIK 78 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l~ 78 (143)
++|+|+|++|++++. .|++|++||..+++.+.... +..+.+++|+|||++|+.++. .++.+++||+. ++.+.
T Consensus 37 ~~~s~dg~~l~~~~~-~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~-----~~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 37 AVISPDGTKVYVANA-HSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNM-----ASSTLSVIDTTSNTVAG 110 (391)
T ss_dssp EEECTTSSEEEEEEG-GGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEET-----TTTEEEEEETTTTEEEE
T ss_pred EEECCCCCEEEEECC-CCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEEC-----CCCEEEEEECCCCeEEE
Confidence 479999998854432 48999999999998877654 358999999999999876663 47899999996 55555
Q ss_pred ecc-CCcEEEEEEeeCCCee-eecCchhhHH
Q psy5876 79 RFN-SPTFCQLRWRPRPASL-LSKEQVDKIK 107 (143)
Q Consensus 79 ~~~-~~~v~~l~wsP~~~~l-~s~s~d~~i~ 107 (143)
... ...+.+++|+|+++.| ++++.++.|+
T Consensus 111 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~ 141 (391)
T 1l0q_A 111 TVKTGKSPLGLALSPDGKKLYVTNNGDKTVS 141 (391)
T ss_dssp EEECSSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEeCCCCcceEEECCCCCEEEEEeCCCCEEE
Confidence 543 5678999999999988 7888777665
No 113
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.53 E-value=4.3e-14 Score=110.01 Aligned_cols=99 Identities=14% Similarity=0.182 Sum_probs=80.4
Q ss_pred CeEec-CCCEEEEEecCCCCeEEEEECCCceEEeee---------------ccCceEEEEECC-CCCEEEEeecCcceec
Q psy5876 1 MKLRM-RGTHIVLAELRDTGSLEFVDTGDFSVMNAA---------------EHHQATDVEWDP-TGRYVMSGVSLWKTKA 63 (143)
Q Consensus 1 i~~SP-dG~~las~~~~~dg~i~iWd~~~~~~~~~~---------------~~~~v~~i~wsP-dG~~lat~s~~~~~~~ 63 (143)
++|+| +|++||+++ .||.|++||+.+++..... +...|++++|+| ++++|++++ .
T Consensus 49 ~~~s~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~------~ 120 (408)
T 4a11_B 49 LDIEPVEGRYMLSGG--SDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS------F 120 (408)
T ss_dssp EEECTTTCCEEEEEE--TTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE------T
T ss_pred EEEecCCCCEEEEEc--CCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe------C
Confidence 57999 999999999 6999999999865432221 345799999999 888999999 6
Q ss_pred CCcEEEEeec-CcEEEec-cCCcEEEEEEeeCCC---eeeecCchhhHH
Q psy5876 64 DTGYWQWSFQ-GKIIKRF-NSPTFCQLRWRPRPA---SLLSKEQVDKIK 107 (143)
Q Consensus 64 D~~i~iW~~~-g~~l~~~-~~~~v~~l~wsP~~~---~l~s~s~d~~i~ 107 (143)
|+.+++||+. ++.+... ....+..+.|.|.++ .+++++.++.|+
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQ 169 (408)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEE
T ss_pred CCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEE
Confidence 9999999996 5555554 467899999999654 899999888775
No 114
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.52 E-value=1.1e-13 Score=110.95 Aligned_cols=97 Identities=12% Similarity=0.200 Sum_probs=83.4
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEEE
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIK 78 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l~ 78 (143)
+++++|++|++|+ .||+|++||+.+++.+..+. ...|++++|+|++ +|++|+ .|+.+++||+. |+++.
T Consensus 127 ~~~~~~~~l~sgs--~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s------~dg~i~vwd~~~~~~~~ 197 (464)
T 3v7d_B 127 CLQFEDNYVITGA--DDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGS------TDRTVRVWDIKKGCCTH 197 (464)
T ss_dssp EEEEETTEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEE------TTSCEEEEETTTTEEEE
T ss_pred EEEECCCEEEEEc--CCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEe------CCCCEEEEECCCCcEEE
Confidence 4677899999999 69999999999998887763 3579999999999 899999 69999999995 77776
Q ss_pred ec--cCCcEEEEEEe--eCCCeeeecCchhhHH
Q psy5876 79 RF--NSPTFCQLRWR--PRPASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~--~~~~v~~l~ws--P~~~~l~s~s~d~~i~ 107 (143)
.. +...|.+++|+ |+++.+++++.|+.|+
T Consensus 198 ~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~ 230 (464)
T 3v7d_B 198 VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 230 (464)
T ss_dssp EECCCSSCEEEEEEEESSSCEEEEEEETTSCEE
T ss_pred EECCCCCccEEEEEecCCCCCEEEEEcCCCcEE
Confidence 65 46789999999 4778999999999886
No 115
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.52 E-value=1.1e-13 Score=112.99 Aligned_cols=92 Identities=15% Similarity=0.168 Sum_probs=74.7
Q ss_pred CeEecC-CCEEEEEecCCCCeEEEEECCCceEEeee-c-cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEE
Q psy5876 1 MKLRMR-GTHIVLAELRDTGSLEFVDTGDFSVMNAA-E-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII 77 (143)
Q Consensus 1 i~~SPd-G~~las~~~~~dg~i~iWd~~~~~~~~~~-~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l 77 (143)
++|+|+ +++||+++ .||+|++||+.++..+... . ...+++++|||||++||+|+ .|+.+++||..|+..
T Consensus 155 v~~~p~~~~~las~s--~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs------~dg~v~iwd~~~~~~ 226 (434)
T 2oit_A 155 MKWNPTVPSMVAVCL--ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK------QNGTVVQYLPTLQEK 226 (434)
T ss_dssp EEECSSCTTEEEEEE--TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE------TTSCEEEECTTCCEE
T ss_pred EEECCCCCCEEEEEE--CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc------CCCcEEEEccCCccc
Confidence 579998 89999998 6999999999987655432 2 35799999999999999999 699999999987655
Q ss_pred Eec--cC-------CcEEEEEEeeCCCeeeec
Q psy5876 78 KRF--NS-------PTFCQLRWRPRPASLLSK 100 (143)
Q Consensus 78 ~~~--~~-------~~v~~l~wsP~~~~l~s~ 100 (143)
... +. ..|.+++|+|++..+++.
T Consensus 227 ~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~ 258 (434)
T 2oit_A 227 KVIPCPPFYESDHPVRVLDVLWIGTYVFAIVY 258 (434)
T ss_dssp EEECCCTTCCTTSCEEEEEEEEEETTEEEEEE
T ss_pred ccccCCcccCCCCceeEEEEEEecCceEEEEE
Confidence 432 11 179999999999888643
No 116
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.52 E-value=8.3e-14 Score=116.71 Aligned_cols=98 Identities=7% Similarity=0.078 Sum_probs=77.4
Q ss_pred CeEecC------CCEEEEEecCCCCeEEEEECCCceEE-----------ee--eccCceEEEEECCCCCEEEEeecCcce
Q psy5876 1 MKLRMR------GTHIVLAELRDTGSLEFVDTGDFSVM-----------NA--AEHHQATDVEWDPTGRYVMSGVSLWKT 61 (143)
Q Consensus 1 i~~SPd------G~~las~~~~~dg~i~iWd~~~~~~~-----------~~--~~~~~v~~i~wsPdG~~lat~s~~~~~ 61 (143)
++|+|+ |++||+++ .||+|++||+.+++.. .. .+...|++++|+|++ +||+|+
T Consensus 213 v~wsp~~~~~~~~~~LAs~s--~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs----- 284 (524)
T 2j04_B 213 LKWHEGCHAPHLVGCLSFVS--QEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGF----- 284 (524)
T ss_dssp EEECSSCCCSSSSCEEEEEE--TTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEE-----
T ss_pred EEECCCCCCCCCCceEEEEe--cCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEe-----
Confidence 478886 68999999 6999999998765311 12 233579999999975 799999
Q ss_pred ecCCcEEEEeec-CcE-E--EeccCCcEEEE--EEeeCC-CeeeecCchhhHH
Q psy5876 62 KADTGYWQWSFQ-GKI-I--KRFNSPTFCQL--RWRPRP-ASLLSKEQVDKIK 107 (143)
Q Consensus 62 ~~D~~i~iW~~~-g~~-l--~~~~~~~v~~l--~wsP~~-~~l~s~s~d~~i~ 107 (143)
.|++|++||+. +.. + ...|...|.++ +|+|+| ..|+|++.|++||
T Consensus 285 -~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk 336 (524)
T 2j04_B 285 -KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFY 336 (524)
T ss_dssp -TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEE
T ss_pred -CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEE
Confidence 69999999996 532 2 23467889999 678998 8899999999986
No 117
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.51 E-value=1.5e-13 Score=110.20 Aligned_cols=96 Identities=16% Similarity=0.236 Sum_probs=83.8
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEEE
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIK 78 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l~ 78 (143)
+++|+|++|++++ .||.|++||+.+++.+..+. ...|++++|+|+|++|++++ .|+.+++||+ +|+++.
T Consensus 275 ~~~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~------~dg~i~vwd~~~~~~~~ 346 (464)
T 3v7d_B 275 TVSGHGNIVVSGS--YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISAS------MDTTIRIWDLENGELMY 346 (464)
T ss_dssp EEEEETTEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEE------TTSCEEEEETTTTEEEE
T ss_pred EEcCCCCEEEEEe--CCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEe------CCCcEEEEECCCCcEEE
Confidence 4689999999999 69999999999998887763 35799999999999999999 6999999999 587777
Q ss_pred ec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 79 RF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.. +...|.+++|+ +..|++++.|+.|+
T Consensus 347 ~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~ 375 (464)
T 3v7d_B 347 TLQGHTALVGLLRLS--DKFLVSAAADGSIR 375 (464)
T ss_dssp EECCCSSCEEEEEEC--SSEEEEEETTSEEE
T ss_pred EEeCCCCcEEEEEEc--CCEEEEEeCCCcEE
Confidence 65 46789999997 57999999999886
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.51 E-value=2.2e-13 Score=106.64 Aligned_cols=100 Identities=11% Similarity=0.193 Sum_probs=80.5
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec-cCceEEEEECCCCCEE-EEeecCcceecCCcEEEEeec-CcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYV-MSGVSLWKTKADTGYWQWSFQ-GKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~-~~~v~~i~wsPdG~~l-at~s~~~~~~~D~~i~iW~~~-g~~l 77 (143)
++|+|+|++|++++. .++.|++||+.+++.+.... +..+.+++|+|||++| ++++ .|+.+++||+. ++.+
T Consensus 79 ~~~spdg~~l~~~~~-~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~------~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNM-ASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNN------GDKTVSVINTVTKAVI 151 (391)
T ss_dssp EEECTTSSEEEEEET-TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEET------TTTEEEEEETTTTEEE
T ss_pred eEECCCCCEEEEEEC-CCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeC------CCCEEEEEECCCCcEE
Confidence 479999999977664 47999999999988776654 4578999999999988 5655 58999999995 6666
Q ss_pred Eecc-CCcEEEEEEeeCCCee-eecCchhhHH
Q psy5876 78 KRFN-SPTFCQLRWRPRPASL-LSKEQVDKIK 107 (143)
Q Consensus 78 ~~~~-~~~v~~l~wsP~~~~l-~s~s~d~~i~ 107 (143)
.... ...+..++|+|+++.| ++++.++.|+
T Consensus 152 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~ 183 (391)
T 1l0q_A 152 NTVSVGRSPKGIAVTPDGTKVYVANFDSMSIS 183 (391)
T ss_dssp EEEECCSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEEecCCCcceEEECCCCCEEEEEeCCCCEEE
Confidence 6554 5678999999999988 6777776654
No 119
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.50 E-value=1.1e-13 Score=104.30 Aligned_cols=96 Identities=8% Similarity=0.139 Sum_probs=78.5
Q ss_pred eEec-CCCEEEEEecCCCCeEEEEECCCceEEeee-ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEEE
Q psy5876 2 KLRM-RGTHIVLAELRDTGSLEFVDTGDFSVMNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIK 78 (143)
Q Consensus 2 ~~SP-dG~~las~~~~~dg~i~iWd~~~~~~~~~~-~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l~ 78 (143)
.|+| ++++|++++ .||.|++||.......... +...+.+++|+|+|+ |++++ .|+.+++||+. ++.+.
T Consensus 149 ~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~------~dg~i~i~d~~~~~~~~ 219 (313)
T 3odt_A 149 KVVSFSENKFLTAS--ADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCS------NDGLIKLVDMHTGDVLR 219 (313)
T ss_dssp EEEETTTTEEEEEE--TTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEE------TTSEEEEEETTTCCEEE
T ss_pred EEccCCCCEEEEEE--CCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEcc------CCCeEEEEECCchhhhh
Confidence 5677 999999999 6999999995543333333 345799999999999 88888 59999999995 77776
Q ss_pred ec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 79 RF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.. +...|.+++|+|++ .|++++.|+.|+
T Consensus 220 ~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~ 249 (313)
T 3odt_A 220 TYEGHESFVYCIKLLPNG-DIVSCGEDRTVR 249 (313)
T ss_dssp EEECCSSCEEEEEECTTS-CEEEEETTSEEE
T ss_pred hhhcCCceEEEEEEecCC-CEEEEecCCEEE
Confidence 65 46789999999999 699999998876
No 120
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.49 E-value=3.6e-13 Score=108.66 Aligned_cols=99 Identities=10% Similarity=0.161 Sum_probs=73.6
Q ss_pred CeEecCCCEEEEEecC-CCCeEEEEECCCceEEeeec-cCceEEEEECCCCCEEE-EeecCcceecCCcEEEEeecCcEE
Q psy5876 1 MKLRMRGTHIVLAELR-DTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVM-SGVSLWKTKADTGYWQWSFQGKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~-~dg~i~iWd~~~~~~~~~~~-~~~v~~i~wsPdG~~la-t~s~~~~~~~D~~i~iW~~~g~~l 77 (143)
++|||||++||.++.+ .+..|++||+.+++...... ...+.+++|||||++|+ +++.. .+..+++||+.+..+
T Consensus 184 ~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~----g~~~i~~~d~~~~~~ 259 (415)
T 2hqs_A 184 PAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKT----GSLNLYVMDLASGQI 259 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTT----SSCEEEEEETTTCCE
T ss_pred eEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecC----CCceEEEEECCCCCE
Confidence 4799999999999842 11499999999887654332 35789999999999998 44421 234599999964433
Q ss_pred Eec--cCCcEEEEEEeeCCCeeeecCch
Q psy5876 78 KRF--NSPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 78 ~~~--~~~~v~~l~wsP~~~~l~s~s~d 103 (143)
... +...+.+++|+|||+.|+.++.+
T Consensus 260 ~~l~~~~~~~~~~~~spdg~~l~~~s~~ 287 (415)
T 2hqs_A 260 RQVTDGRSNNTEPTWFPDSQNLAFTSDQ 287 (415)
T ss_dssp EECCCCSSCEEEEEECTTSSEEEEEECT
T ss_pred EeCcCCCCcccceEECCCCCEEEEEECC
Confidence 433 35679999999999999987753
No 121
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.48 E-value=2.9e-13 Score=108.88 Aligned_cols=99 Identities=15% Similarity=0.284 Sum_probs=79.1
Q ss_pred CeEec-CCCEEEEEecCCCCeEEEEECCCc---eEEeee--ccCceEEEEECCCCC-EEEEeecCcceecCCcEEEEeec
Q psy5876 1 MKLRM-RGTHIVLAELRDTGSLEFVDTGDF---SVMNAA--EHHQATDVEWDPTGR-YVMSGVSLWKTKADTGYWQWSFQ 73 (143)
Q Consensus 1 i~~SP-dG~~las~~~~~dg~i~iWd~~~~---~~~~~~--~~~~v~~i~wsPdG~-~lat~s~~~~~~~D~~i~iW~~~ 73 (143)
++|+| ++++|++++ .||.|++||+.+. +.+... +...|++++|+|+|+ +|++|+ .|+.|++||+.
T Consensus 237 v~~~p~~~~~l~s~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~------~dg~v~vwd~~ 308 (430)
T 2xyi_A 237 VAWHLLHESLFGSVA--DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGS------ADKTVALWDLR 308 (430)
T ss_dssp EEECSSCTTEEEEEE--TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEE------TTSEEEEEETT
T ss_pred eEEeCCCCCEEEEEe--CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEe------CCCeEEEEeCC
Confidence 47999 778888988 6999999999865 333333 346799999999998 588888 69999999995
Q ss_pred --CcEEEec--cCCcEEEEEEeeCCC-eeeecCchhhHH
Q psy5876 74 --GKIIKRF--NSPTFCQLRWRPRPA-SLLSKEQVDKIK 107 (143)
Q Consensus 74 --g~~l~~~--~~~~v~~l~wsP~~~-~l~s~s~d~~i~ 107 (143)
+..+... +...|.+++|+|+++ .|++++.|+.|+
T Consensus 309 ~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~ 347 (430)
T 2xyi_A 309 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLH 347 (430)
T ss_dssp CTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCE
T ss_pred CCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEE
Confidence 3444443 577999999999996 588999888775
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.45 E-value=1.1e-12 Score=104.02 Aligned_cols=106 Identities=10% Similarity=0.114 Sum_probs=80.9
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCcc---------eecCCcEEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWK---------TKADTGYWQW 70 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~~---------~~~D~~i~iW 70 (143)
++|+|+|++|++++. .++.|++||+.+++.+....+ ..+.+++|+|||++|++++.... -..|+.+++|
T Consensus 308 ~~~~~~g~~l~~~~~-~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~ 386 (433)
T 3bws_A 308 IVSGNTENKIYVSDM-CCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVI 386 (433)
T ss_dssp EEECSSTTEEEEEET-TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEE
T ss_pred EEECCCCCEEEEEec-CCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEE
Confidence 479999987766543 589999999999887776543 56999999999999998884210 0115699999
Q ss_pred ee-cCcEEEecc-CCcEEEEEEeeCCCeeeecCc-hhhHH
Q psy5876 71 SF-QGKIIKRFN-SPTFCQLRWRPRPASLLSKEQ-VDKIK 107 (143)
Q Consensus 71 ~~-~g~~l~~~~-~~~v~~l~wsP~~~~l~s~s~-d~~i~ 107 (143)
|. +++.+.... ...+.+++|+|+|+.|++++. |+.|+
T Consensus 387 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~ 426 (433)
T 3bws_A 387 DTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIR 426 (433)
T ss_dssp ETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEE
T ss_pred ECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEE
Confidence 99 466666553 567999999999999987654 66553
No 123
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.44 E-value=3.6e-13 Score=114.13 Aligned_cols=95 Identities=9% Similarity=0.162 Sum_probs=75.3
Q ss_pred CeEecCCCEEEEEecCCCC-----eEEEEECCCceEEeeec--c------------------------CceEEEEECCCC
Q psy5876 1 MKLRMRGTHIVLAELRDTG-----SLEFVDTGDFSVMNAAE--H------------------------HQATDVEWDPTG 49 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg-----~i~iWd~~~~~~~~~~~--~------------------------~~v~~i~wsPdG 49 (143)
++|||||++|++++. .|| +|.+||+.+++...... . ..+.+++|||||
T Consensus 42 ~~~SpdG~~la~~~~-~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg 120 (741)
T 2ecf_A 42 PKVAPDGSRVTFLRG-KDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDA 120 (741)
T ss_dssp EEECTTSSEEEEEEC-CSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTS
T ss_pred ceEecCCCEEEEEec-cCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCC
Confidence 479999999999983 267 89999999887544332 1 127899999999
Q ss_pred CEEEEeecCcceecCCcEEEEeecCc---EEEec--cCCcEEEEEEeeCCCeeeecCch
Q psy5876 50 RYVMSGVSLWKTKADTGYWQWSFQGK---IIKRF--NSPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 50 ~~lat~s~~~~~~~D~~i~iW~~~g~---~l~~~--~~~~v~~l~wsP~~~~l~s~s~d 103 (143)
++|++++ ++.+++||+.+. .+... +...+..++|+|||+.|+.++++
T Consensus 121 ~~l~~~~-------~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~ 172 (741)
T 2ecf_A 121 QRLLFPL-------GGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGR 172 (741)
T ss_dssp SEEEEEE-------TTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETT
T ss_pred CEEEEEe-------CCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCC
Confidence 9999999 478999999754 44433 34679999999999999988754
No 124
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.43 E-value=7.1e-13 Score=114.31 Aligned_cols=99 Identities=12% Similarity=0.205 Sum_probs=81.8
Q ss_pred CeEecC--CCEEEEEecCCCCeEEEEECCCce--EEeee--ccCceEEEEECCC--CCEEEEeecCcceecCCcEEEEee
Q psy5876 1 MKLRMR--GTHIVLAELRDTGSLEFVDTGDFS--VMNAA--EHHQATDVEWDPT--GRYVMSGVSLWKTKADTGYWQWSF 72 (143)
Q Consensus 1 i~~SPd--G~~las~~~~~dg~i~iWd~~~~~--~~~~~--~~~~v~~i~wsPd--G~~lat~s~~~~~~~D~~i~iW~~ 72 (143)
++|+|+ |++|++|+ .||+|++||+.+++ .+... +...|++++|+|+ |++|++|+ .|+.|++||+
T Consensus 59 l~~s~~~~~~~l~s~s--~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs------~dg~I~vwdl 130 (753)
T 3jro_A 59 VDWAHPKFGTILASCS--YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS------SDGKVSVVEF 130 (753)
T ss_dssp EEECCTTSCSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE------TTSEEEEEEC
T ss_pred EEecCCCCCCEEEEEe--CCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEe------CCCcEEEEEe
Confidence 479998 99999999 69999999998875 44443 3357999999999 99999999 6999999999
Q ss_pred cCc-E--E--EeccCCcEEEEEEee-------------CCCeeeecCchhhHH
Q psy5876 73 QGK-I--I--KRFNSPTFCQLRWRP-------------RPASLLSKEQVDKIK 107 (143)
Q Consensus 73 ~g~-~--l--~~~~~~~v~~l~wsP-------------~~~~l~s~s~d~~i~ 107 (143)
... . . ...+...|.+++|+| ++..+++++.|+.|+
T Consensus 131 ~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~ 183 (753)
T 3jro_A 131 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVK 183 (753)
T ss_dssp CSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEE
T ss_pred ecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEE
Confidence 532 1 1 223567899999999 599999999999876
No 125
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.42 E-value=6.5e-13 Score=112.56 Aligned_cols=94 Identities=16% Similarity=0.227 Sum_probs=73.0
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCc---eEEeeec-cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDF---SVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKI 76 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~---~~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~ 76 (143)
++|||||++|++++ ++.|.+||+.++ +...... ...+..++|||||++||+++ ++.+++||+.+..
T Consensus 114 ~~~SpDg~~l~~~~---~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-------~~~i~~~d~~~g~ 183 (741)
T 2ecf_A 114 YQWSPDAQRLLFPL---GGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-------GRNLWVIDLASGR 183 (741)
T ss_dssp CEECTTSSEEEEEE---TTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-------TTEEEEEETTTTE
T ss_pred eEECCCCCEEEEEe---CCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-------CCcEEEEecCCCC
Confidence 57999999999998 499999999887 4432222 35699999999999999998 5689999997544
Q ss_pred EEec-c--CCc----------------EEEEEEeeCCCeeeecCchh
Q psy5876 77 IKRF-N--SPT----------------FCQLRWRPRPASLLSKEQVD 104 (143)
Q Consensus 77 l~~~-~--~~~----------------v~~l~wsP~~~~l~s~s~d~ 104 (143)
.... . ... +..++|+|||+.|+.++.|+
T Consensus 184 ~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 184 QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred EEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 3332 2 222 47799999999999987664
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.42 E-value=3.5e-13 Score=108.63 Aligned_cols=101 Identities=8% Similarity=0.129 Sum_probs=66.1
Q ss_pred CeEecC----CCEEEEEec------------------CCCCeEEEEEC-CCceEEee--eccCceEEEEECC---CCCEE
Q psy5876 1 MKLRMR----GTHIVLAEL------------------RDTGSLEFVDT-GDFSVMNA--AEHHQATDVEWDP---TGRYV 52 (143)
Q Consensus 1 i~~SPd----G~~las~~~------------------~~dg~i~iWd~-~~~~~~~~--~~~~~v~~i~wsP---dG~~l 52 (143)
|+|||| |+++++++. +-|+.|++|++ .+++.+.. .+...++.++||| ||.+|
T Consensus 117 la~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~L 196 (356)
T 2w18_A 117 LFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEAL 196 (356)
T ss_dssp ECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEE
T ss_pred EEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceE
Confidence 467888 888887662 02566667776 33544433 2334566777777 66778
Q ss_pred EEeecCcceecCCcEEEEeec-CcEEEecc-----CCcEEEEEEeeCCCeee------------ecCchhhHH
Q psy5876 53 MSGVSLWKTKADTGYWQWSFQ-GKIIKRFN-----SPTFCQLRWRPRPASLL------------SKEQVDKIK 107 (143)
Q Consensus 53 at~s~~~~~~~D~~i~iW~~~-g~~l~~~~-----~~~v~~l~wsP~~~~l~------------s~s~d~~i~ 107 (143)
|++| .|++|+|||+. |++++.+. ...+.+++|+|+|+.++ |++.|++||
T Consensus 197 aSgS------~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIk 263 (356)
T 2w18_A 197 LGTT------IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLI 263 (356)
T ss_dssp EEEE------TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEE
T ss_pred EEec------CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEE
Confidence 8888 69999999995 99888763 23678889999999874 456666665
No 127
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.41 E-value=3.1e-13 Score=114.56 Aligned_cols=95 Identities=14% Similarity=0.095 Sum_probs=72.4
Q ss_pred CeEecCCCEEEEEecC-------CCCeEEEEECCCceEE--eeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEe
Q psy5876 1 MKLRMRGTHIVLAELR-------DTGSLEFVDTGDFSVM--NAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWS 71 (143)
Q Consensus 1 i~~SPdG~~las~~~~-------~dg~i~iWd~~~~~~~--~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~ 71 (143)
++|||||++||.++.. .+++|++||+.+++.+ ... ...+..++|||||++||.++ ++.|++|+
T Consensus 65 ~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l-~~~~~~~~~SPDG~~la~~~-------~~~i~~~~ 136 (719)
T 1z68_A 65 YGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL-PRPIQYLCWSPVGSKLAYVY-------QNNIYLKQ 136 (719)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-CSSBCCEEECSSTTCEEEEE-------TTEEEEES
T ss_pred EEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec-CcccccceECCCCCEEEEEE-------CCeEEEEe
Confidence 4799999999998720 1589999999998773 222 24688999999999999987 77999999
Q ss_pred ec-CcEEEecc---CCcE-----------------EEEEEeeCCCeeeecCch
Q psy5876 72 FQ-GKIIKRFN---SPTF-----------------CQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 72 ~~-g~~l~~~~---~~~v-----------------~~l~wsP~~~~l~s~s~d 103 (143)
+. |+...... ...| ..++|+|||+.|++++.|
T Consensus 137 ~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 137 RPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp STTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred CCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 95 54433211 2223 389999999999998765
No 128
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.40 E-value=2.8e-12 Score=102.77 Aligned_cols=94 Identities=10% Similarity=0.226 Sum_probs=79.4
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeec-----cCceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCc
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-----HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGK 75 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~-----~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~ 75 (143)
+++++|++|++++ .||.|++||+.+++.+..+. ...|++++|+ +++|++++ .|+.|++||+ +|+
T Consensus 324 ~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~------~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 324 GMELKDNILVSGN--ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSS------DDGTVKLWDLKTGE 393 (445)
T ss_dssp EEEEETTEEEEEE--TTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEE------TTSEEEEEETTTCC
T ss_pred EEEEeCCEEEEEe--CCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEe------CCCeEEEEECCCCc
Confidence 4677899999999 69999999999988877653 2469999996 68999999 6999999999 477
Q ss_pred EEEec-------cCCcEEEEEEeeCCCeeeecCchhh
Q psy5876 76 IIKRF-------NSPTFCQLRWRPRPASLLSKEQVDK 105 (143)
Q Consensus 76 ~l~~~-------~~~~v~~l~wsP~~~~l~s~s~d~~ 105 (143)
.+... +...|++++|+|++..|++++.|++
T Consensus 394 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 394 FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp EEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred eeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCC
Confidence 77654 2567999999999999999999986
No 129
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.39 E-value=4.6e-13 Score=113.46 Aligned_cols=98 Identities=10% Similarity=0.177 Sum_probs=74.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeecc-C----ceEEEEECCCCCEEEEeecC---cceecCCcEEEEee
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-H----QATDVEWDPTGRYVMSGVSL---WKTKADTGYWQWSF 72 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~-~----~v~~i~wsPdG~~lat~s~~---~~~~~D~~i~iW~~ 72 (143)
++|||||++++++. ||+|++||+.+++......+ . .+.+++|||||++||+++.. |+...++.+++||+
T Consensus 21 ~~~s~dg~~~~~~~---d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 21 PNWISGQEYLHQSA---DNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CEESSSSEEEEECT---TSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred cEECCCCeEEEEcC---CCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 47999997766653 89999999998876554432 2 38999999999999998841 22223689999999
Q ss_pred cCcEE---EeccCCcEEEEEEeeCCCeeeecCc
Q psy5876 73 QGKII---KRFNSPTFCQLRWRPRPASLLSKEQ 102 (143)
Q Consensus 73 ~g~~l---~~~~~~~v~~l~wsP~~~~l~s~s~ 102 (143)
++... ... ...+..++|||||+.|+.+++
T Consensus 98 ~~g~~~~~~~l-~~~~~~~~~SPDG~~la~~~~ 129 (719)
T 1z68_A 98 SNGEFVRGNEL-PRPIQYLCWSPVGSKLAYVYQ 129 (719)
T ss_dssp TTTEECCSSCC-CSSBCCEEECSSTTCEEEEET
T ss_pred CCCccccceec-CcccccceECCCCCEEEEEEC
Confidence 75544 222 356888999999999998753
No 130
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.38 E-value=2.1e-12 Score=102.29 Aligned_cols=95 Identities=8% Similarity=-0.005 Sum_probs=78.3
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l 77 (143)
++|+|+|+++++++ .||.|++||+++++.+..+. ...+.+++|+|+|+++++++. .|+.+++||+. |+.+
T Consensus 175 ~~~~~~~~~~~s~~--~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~i~~~d~~~~~~~ 247 (433)
T 3bws_A 175 ISIPEHNELWVSQM--QANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNW-----ISEDISVIDRKTKLEI 247 (433)
T ss_dssp EEEGGGTEEEEEEG--GGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEET-----TTTEEEEEETTTTEEE
T ss_pred EEEcCCCEEEEEEC--CCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEec-----CCCcEEEEECCCCcEE
Confidence 47899999999998 58999999999888776653 357999999999999865553 58899999994 6666
Q ss_pred Eecc-CCcEEEEEEeeCCCeeeecCc
Q psy5876 78 KRFN-SPTFCQLRWRPRPASLLSKEQ 102 (143)
Q Consensus 78 ~~~~-~~~v~~l~wsP~~~~l~s~s~ 102 (143)
.... ...+..++|+|+|+.|++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 248 RKTDKIGLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp EECCCCSEEEEEEECTTSSEEEEEEE
T ss_pred EEecCCCCceEEEEcCCCCEEEEEEC
Confidence 6554 457999999999999998874
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.37 E-value=4e-12 Score=102.55 Aligned_cols=97 Identities=11% Similarity=0.160 Sum_probs=71.2
Q ss_pred CeEecCCCEEEEEecCCCC--eEEEEECCCceEEeeec-cCceEEEEECCCCCEEEEeecCcceecCC--cEEEEeecCc
Q psy5876 1 MKLRMRGTHIVLAELRDTG--SLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADT--GYWQWSFQGK 75 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg--~i~iWd~~~~~~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~--~i~iW~~~g~ 75 (143)
++|||||++|+.++. .+| .|.+||+.+++...... ...+.+++|||||++|++++. .++ .+++||+.+.
T Consensus 228 ~~~spdg~~la~~~~-~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~-----~~g~~~i~~~d~~~~ 301 (415)
T 2hqs_A 228 PAFSPDGSKLAFALS-KTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD-----QAGRPQVYKVNINGG 301 (415)
T ss_dssp EEECTTSSEEEEEEC-TTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEEC-----TTSSCEEEEEETTSS
T ss_pred EEEcCCCCEEEEEEe-cCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEEC-----CCCCcEEEEEECCCC
Confidence 479999999984332 344 59999998876543322 346899999999999999883 233 6777888654
Q ss_pred EEEe--ccCCcEEEEEEeeCCCeeeecCch
Q psy5876 76 IIKR--FNSPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 76 ~l~~--~~~~~v~~l~wsP~~~~l~s~s~d 103 (143)
.+.. .+...+..++|+|+|+.|+.++.+
T Consensus 302 ~~~~l~~~~~~~~~~~~spdG~~l~~~~~~ 331 (415)
T 2hqs_A 302 APQRITWEGSQNQDADVSSDGKFMVMVSSN 331 (415)
T ss_dssp CCEECCCSSSEEEEEEECTTSSEEEEEEEC
T ss_pred CEEEEecCCCcccCeEECCCCCEEEEEECc
Confidence 3333 235678899999999999987754
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.37 E-value=1.8e-12 Score=96.09 Aligned_cols=98 Identities=12% Similarity=0.049 Sum_probs=71.6
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCC-ceEEeeec-c--CceEEEEECCCCCEEEEeecCcceecCCcEEEEee--cC
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGD-FSVMNAAE-H--HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF--QG 74 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~-~~~~~~~~-~--~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~--~g 74 (143)
++|||||++|++++ ++.|.+||+.+ ++...... + ..+.+++|+|||++|++++.. .++...||.+ .+
T Consensus 47 ~~~spdg~~l~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~----~~~~~~l~~~~~~~ 119 (297)
T 2ojh_A 47 PNWSPDGKYLLLNS---EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKV----EFGKSAIYLLPSTG 119 (297)
T ss_dssp EEECTTSSEEEEEE---TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECT----TTSSCEEEEEETTC
T ss_pred eEECCCCCEEEEEc---CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeC----CCCcceEEEEECCC
Confidence 47999999999987 78999999988 76544332 2 467899999999999999832 2334555554 44
Q ss_pred cEEEec-cCCcEEEEEEeeCCCeee-ecCchhh
Q psy5876 75 KIIKRF-NSPTFCQLRWRPRPASLL-SKEQVDK 105 (143)
Q Consensus 75 ~~l~~~-~~~~v~~l~wsP~~~~l~-s~s~d~~ 105 (143)
...... ....+..++|+|+++.|+ +++.++.
T Consensus 120 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 152 (297)
T 2ojh_A 120 GTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQV 152 (297)
T ss_dssp CCCEECCSSSSEEEEEECTTSSEEEEEEEETTE
T ss_pred CceEEeecCCCccceEECCCCCEEEEEECCCCc
Confidence 444433 345689999999999888 6666654
No 133
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.36 E-value=5.5e-12 Score=101.09 Aligned_cols=94 Identities=13% Similarity=0.292 Sum_probs=80.2
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEEE
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIK 78 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l~ 78 (143)
+++++|++|++|+ .||+|++||+.+++.+..+. ...|++++| +|++|++|+ .|+.|++||+. |+++.
T Consensus 138 ~~~~d~~~l~~g~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~------~dg~i~vwd~~~~~~~~ 207 (435)
T 1p22_A 138 CLQYDDQKIVSGL--RDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGS------SDSTVRVWDVNTGEMLN 207 (435)
T ss_dssp EEECCSSEEEEEE--SSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEE------TTSCEEEEESSSCCEEE
T ss_pred EEEECCCEEEEEe--CCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEc------CCCeEEEEECCCCcEEE
Confidence 5788999999999 69999999999988877663 357999988 899999999 69999999995 77776
Q ss_pred ec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 79 RF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.. +...|.+++|+| ..+++++.|+.|+
T Consensus 208 ~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~ 236 (435)
T 1p22_A 208 TLIHHCEAVLHLRFNN--GMMVTCSKDRSIA 236 (435)
T ss_dssp EECCCCSCEEEEECCT--TEEEEEETTSCEE
T ss_pred EEcCCCCcEEEEEEcC--CEEEEeeCCCcEE
Confidence 65 467899999974 5999999999876
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.36 E-value=1.7e-13 Score=115.70 Aligned_cols=99 Identities=13% Similarity=0.121 Sum_probs=73.4
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeecc-C----ceEEEEECCCCCEEEEeecCc---ceecCCcEEEEee
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-H----QATDVEWDPTGRYVMSGVSLW---KTKADTGYWQWSF 72 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~-~----~v~~i~wsPdG~~lat~s~~~---~~~~D~~i~iW~~ 72 (143)
++|||||+++++ + .||+|++||+.+++......+ . .+.+++|||||++||+++... +...++.+++||+
T Consensus 22 ~~~spdg~~~~~-~--~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~ 98 (723)
T 1xfd_A 22 AKWISDTEFIYR-E--QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKI 98 (723)
T ss_dssp CCBSSSSCBCCC-C--SSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEES
T ss_pred cEEcCCCcEEEE-e--CCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEEC
Confidence 579999998876 4 489999999998765544432 2 389999999999999998421 1123478999999
Q ss_pred cCcEEEecc-----CCcEEEEEEeeCCCeeeecCc
Q psy5876 73 QGKIIKRFN-----SPTFCQLRWRPRPASLLSKEQ 102 (143)
Q Consensus 73 ~g~~l~~~~-----~~~v~~l~wsP~~~~l~s~s~ 102 (143)
++....... ...+..++|+|||+.|+.++.
T Consensus 99 ~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~ 133 (723)
T 1xfd_A 99 PHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE 133 (723)
T ss_dssp SSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET
T ss_pred CCCceEeccCCccccccccccEECCCCCEEEEEEC
Confidence 644323221 224889999999999998876
No 135
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.36 E-value=4.5e-12 Score=112.52 Aligned_cols=102 Identities=15% Similarity=0.111 Sum_probs=77.9
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeee--ccCceEEEEECCCCCEEEEeecCc----ceecCCcEEEEeecC
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLW----KTKADTGYWQWSFQG 74 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~--~~~~v~~i~wsPdG~~lat~s~~~----~~~~D~~i~iW~~~g 74 (143)
++|||||++||+++ .++.|++||+.+++..... +...+..++|||||++||+++... ....++.+++||+.+
T Consensus 384 ~~~SpDG~~la~~~--~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 384 MGVDRNGKFAVVAN--DRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EEECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred eEECCCCCEEEEEC--CCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 47999999999998 5899999999988765544 334689999999999999987410 000135899999975
Q ss_pred cEEEec--cCCcEEEEEEeeCCCeeeecCchh
Q psy5876 75 KIIKRF--NSPTFCQLRWRPRPASLLSKEQVD 104 (143)
Q Consensus 75 ~~l~~~--~~~~v~~l~wsP~~~~l~s~s~d~ 104 (143)
..+... +...+..++|+|+|+.|+..+.+.
T Consensus 462 g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 462 RKIFAATTENSHDYAPAFDADSKNLYYLSYRS 493 (1045)
T ss_dssp TEEEECSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred CcEEEeeCCCcccCCceEcCCCCEEEEEeccc
Confidence 545543 355788999999999999877643
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.34 E-value=1.3e-12 Score=110.30 Aligned_cols=97 Identities=11% Similarity=0.144 Sum_probs=71.3
Q ss_pred CeEecCCCEEEEEecC-------CCCeEEEEECCCceE--Eeeec-c-CceEEEEECCCCCEEEEeecCcceecCCcEEE
Q psy5876 1 MKLRMRGTHIVLAELR-------DTGSLEFVDTGDFSV--MNAAE-H-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQ 69 (143)
Q Consensus 1 i~~SPdG~~las~~~~-------~dg~i~iWd~~~~~~--~~~~~-~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~i 69 (143)
++|||||++||+++.+ .++.+.+||+.+++. +.... + ..+..++|||||++||.++ ++.+++
T Consensus 66 ~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~-------~~~i~~ 138 (723)
T 1xfd_A 66 YEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-------ENNIYY 138 (723)
T ss_dssp EEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-------TTEEEE
T ss_pred EEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEE-------CCeEEE
Confidence 4799999999998731 037899999998764 22221 1 2378899999999999999 578999
Q ss_pred Eeec-CcEEEe--ccCCc------------------EEEEEEeeCCCeeeecCchh
Q psy5876 70 WSFQ-GKIIKR--FNSPT------------------FCQLRWRPRPASLLSKEQVD 104 (143)
Q Consensus 70 W~~~-g~~l~~--~~~~~------------------v~~l~wsP~~~~l~s~s~d~ 104 (143)
|+.. |+.... .+... +..++|+|||+.|++++.+.
T Consensus 139 ~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 139 CAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp ESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC
T ss_pred EECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC
Confidence 9996 443332 22222 27899999999999987654
No 137
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.32 E-value=1.4e-11 Score=98.64 Aligned_cols=94 Identities=15% Similarity=0.229 Sum_probs=79.2
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEEE
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIK 78 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l~ 78 (143)
+++|+|++|++|+ .||+|++||+.+++.+..+. ...|.+++|+ +++|++|+ .|+.|++||+. |+++.
T Consensus 124 ~~~~~g~~l~sg~--~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~------~dg~i~vwd~~~~~~~~ 193 (445)
T 2ovr_B 124 CLQFCGNRIVSGS--DDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGS------TDRTLKVWNAETGECIH 193 (445)
T ss_dssp EEEEETTEEEEEE--TTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEE------TTSCEEEEETTTTEEEE
T ss_pred EEEEcCCEEEEEE--CCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEe------CCCeEEEEECCcCcEEE
Confidence 5788999999999 69999999999998877663 3579999998 67999999 69999999995 77766
Q ss_pred ec--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 79 RF--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.. +...|.+++|+ +..+++++.|+.|+
T Consensus 194 ~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~ 222 (445)
T 2ovr_B 194 TLYGHTSTVRCMHLH--EKRVVSGSRDATLR 222 (445)
T ss_dssp EECCCSSCEEEEEEE--TTEEEEEETTSEEE
T ss_pred EECCCCCcEEEEEec--CCEEEEEeCCCEEE
Confidence 54 46789999885 56899999998876
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.32 E-value=6.3e-12 Score=95.74 Aligned_cols=101 Identities=12% Similarity=0.082 Sum_probs=74.5
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECC--Cce--EEeeec-cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-C
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTG--DFS--VMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-G 74 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~--~~~--~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g 74 (143)
++|||||++|++++. .++.|.+|+++ +++ .+.... ...+..++|+|||++|++++. .++.+.+|++. |
T Consensus 43 ~~~spdg~~l~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-----~~~~i~~~d~~~~ 116 (343)
T 1ri6_A 43 MVVSPDKRYLYVGVR-PEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSY-----NAGNVSVTRLEDG 116 (343)
T ss_dssp EEECTTSSEEEEEET-TTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEET-----TTTEEEEEEEETT
T ss_pred EEECCCCCEEEEeec-CCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEec-----CCCeEEEEECCCC
Confidence 479999999999884 24999999987 443 333332 347889999999999988774 47789999992 3
Q ss_pred ---cEEEecc-CCcEEEEEEeeCCCeeeecC-chhhHH
Q psy5876 75 ---KIIKRFN-SPTFCQLRWRPRPASLLSKE-QVDKIK 107 (143)
Q Consensus 75 ---~~l~~~~-~~~v~~l~wsP~~~~l~s~s-~d~~i~ 107 (143)
+.+.... ...+..++|+|+|+.|+.++ .++.|+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~ 154 (343)
T 1ri6_A 117 LPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRIC 154 (343)
T ss_dssp EEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEE
T ss_pred ccccccccccCCCCceEEEECCCCCEEEEecCCCCEEE
Confidence 2333333 45688999999999888765 555543
No 139
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.32 E-value=9.5e-13 Score=109.32 Aligned_cols=98 Identities=10% Similarity=0.019 Sum_probs=71.4
Q ss_pred CeEecCCCEEEEEecCCC----CeEEEEECCCceEEeee-ccCceEEEEECCCCCEEEEeecCcceecCC--cEEEEeec
Q psy5876 1 MKLRMRGTHIVLAELRDT----GSLEFVDTGDFSVMNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADT--GYWQWSFQ 73 (143)
Q Consensus 1 i~~SPdG~~las~~~~~d----g~i~iWd~~~~~~~~~~-~~~~v~~i~wsPdG~~lat~s~~~~~~~D~--~i~iW~~~ 73 (143)
++|||||++||.++. + +.|.+||+.+++...-. +...+..++|||||++|+++. .++ .+++||++
T Consensus 155 ~~~spDG~~la~~~~--~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~------~~~~~~i~~~d~~ 226 (582)
T 3o4h_A 155 FVSDIRGDLIAGLGF--FGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLE------TAREARLVTVDPR 226 (582)
T ss_dssp EEEEEETTEEEEEEE--EETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEE------CSSCEEEEEECTT
T ss_pred EEECCCCCEEEEEEE--cCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEcc------CCCeeEEEEEcCC
Confidence 379999999998763 4 68999998877644322 235689999999999999655 455 79999996
Q ss_pred CcEEEecc--CCcEEEEE--------EeeCCCeeeecCchhhH
Q psy5876 74 GKIIKRFN--SPTFCQLR--------WRPRPASLLSKEQVDKI 106 (143)
Q Consensus 74 g~~l~~~~--~~~v~~l~--------wsP~~~~l~s~s~d~~i 106 (143)
+....... ...+..++ |+|||..+++++.++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~ 269 (582)
T 3o4h_A 227 DGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRS 269 (582)
T ss_dssp TCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEE
T ss_pred CCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcE
Confidence 44333322 23444555 99999888888887754
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.30 E-value=8.8e-12 Score=105.24 Aligned_cols=101 Identities=11% Similarity=0.132 Sum_probs=72.4
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCC-----ceEEeee--ccCc--------------eEEEEECCCCCEEEEeecCc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGD-----FSVMNAA--EHHQ--------------ATDVEWDPTGRYVMSGVSLW 59 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~-----~~~~~~~--~~~~--------------v~~i~wsPdG~~lat~s~~~ 59 (143)
++|||||++||.+. ++.|.+||+.+ ++..... +... +.+++|||||++||+++.+.
T Consensus 126 ~~~SpdG~~la~~~---~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~ 202 (706)
T 2z3z_A 126 LDFSPVGDRVAYVR---NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQ 202 (706)
T ss_dssp CEECTTSSEEEEEE---TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEEC
T ss_pred CcCCCCCCEEEEEE---CCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECC
Confidence 57999999999975 79999999987 6654322 2222 48899999999999987210
Q ss_pred c---------------------------eecCCcEEEEeecCcEEEe-c----cCCcEEEEEEeeCCCeeeecCchh
Q psy5876 60 K---------------------------TKADTGYWQWSFQGKIIKR-F----NSPTFCQLRWRPRPASLLSKEQVD 104 (143)
Q Consensus 60 ~---------------------------~~~D~~i~iW~~~g~~l~~-~----~~~~v~~l~wsP~~~~l~s~s~d~ 104 (143)
. ...+..+++||+.+..... . +...+.+++|+|||+.|++++.+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 279 (706)
T 2z3z_A 203 SMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNR 279 (706)
T ss_dssp TTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECT
T ss_pred CCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCC
Confidence 0 0024578999996543322 2 234689999999999999876543
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.30 E-value=2.6e-11 Score=89.75 Aligned_cols=96 Identities=9% Similarity=0.096 Sum_probs=72.2
Q ss_pred CeEecCCCEEE-EEecCCCCeEEEEEC--CCceEEeee-ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec--C
Q psy5876 1 MKLRMRGTHIV-LAELRDTGSLEFVDT--GDFSVMNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ--G 74 (143)
Q Consensus 1 i~~SPdG~~la-s~~~~~dg~i~iWd~--~~~~~~~~~-~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~--g 74 (143)
++|||||++|+ +++ .++.++||++ .+++..... +...+.+++|+|||++|+.++. .++.+.||+++ +
T Consensus 134 ~~~spdg~~l~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-----~~~~~~i~~~~~~~ 206 (297)
T 2ojh_A 134 HGWSPDGKSFTYCGI--RDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSS-----RTGQMQIWRVRVDG 206 (297)
T ss_dssp EEECTTSSEEEEEEE--ETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEEC-----TTSSCEEEEEETTS
T ss_pred eEECCCCCEEEEEEC--CCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEec-----CCCCccEEEECCCC
Confidence 37999999998 455 4899999995 444443322 2357899999999999988773 47788899884 5
Q ss_pred cEEEecc--CCcEEEEEEeeCCCeeeecCch
Q psy5876 75 KIIKRFN--SPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 75 ~~l~~~~--~~~v~~l~wsP~~~~l~s~s~d 103 (143)
..+.... ...+..++|+|+|+.|+.++.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 207 SSVERITDSAYGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp SCEEECCCCSEEEEEEEECTTSSEEEEEEEE
T ss_pred CCcEEEecCCcccCCeEECCCCCEEEEEEcC
Confidence 5555443 4578899999999999988765
No 142
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.30 E-value=8.3e-12 Score=107.12 Aligned_cols=95 Identities=15% Similarity=0.160 Sum_probs=71.6
Q ss_pred eEecCCCEEEEEecCCC---------CeEEEEECCCceEEeeec-cCceEEEEECCCCCEEEEeecCcceecCCcEEEEe
Q psy5876 2 KLRMRGTHIVLAELRDT---------GSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWS 71 (143)
Q Consensus 2 ~~SPdG~~las~~~~~d---------g~i~iWd~~~~~~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~ 71 (143)
+|||||++|+.++. + +.+.+||+.++++..... ...+..++|||||++||.++ |+.|++|+
T Consensus 68 ~~Spdg~~l~~~~~--~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-------~~~i~~~~ 138 (740)
T 4a5s_A 68 SISPDGQFILLEYN--YVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-------NNDIYVKI 138 (740)
T ss_dssp EECTTSSEEEEEEE--EEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-------TTEEEEES
T ss_pred EECCCCCEEEEEEC--CeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-------CCeEEEEE
Confidence 68999999999872 3 677899999987654322 35689999999999999987 78899999
Q ss_pred ec-CcEEEecc---CCcEE-----------------EEEEeeCCCeeeecCchhh
Q psy5876 72 FQ-GKIIKRFN---SPTFC-----------------QLRWRPRPASLLSKEQVDK 105 (143)
Q Consensus 72 ~~-g~~l~~~~---~~~v~-----------------~l~wsP~~~~l~s~s~d~~ 105 (143)
.. |...+... ...+. .++|||||+.|+..+.|..
T Consensus 139 ~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~ 193 (740)
T 4a5s_A 139 EPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDT 193 (740)
T ss_dssp STTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECT
T ss_pred CCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEccc
Confidence 96 44332111 22232 4899999999999876654
No 143
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.29 E-value=1.1e-11 Score=104.00 Aligned_cols=97 Identities=10% Similarity=0.106 Sum_probs=80.9
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeec-cCceEEEEECCCCCEEEEeecCcceecCCcEEEEee---cCcEE
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF---QGKII 77 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~---~g~~l 77 (143)
.|+|+|+.+++++ .+++|.+||..+++++.++. +..+..++|||||++|++++ .|+.|.+||+ +++++
T Consensus 144 ~~~p~~~~~vs~~--~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~------~d~~V~v~D~~~~t~~~~ 215 (543)
T 1nir_A 144 DLDLPNLFSVTLR--DAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIG------RDARIDMIDLWAKEPTKV 215 (543)
T ss_dssp CCCGGGEEEEEEG--GGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEE------TTSEEEEEETTSSSCEEE
T ss_pred ccCCCCEEEEEEc--CCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEEC------CCCeEEEEECcCCCCcEE
Confidence 4789998888877 58999999999999888765 44588999999999999999 5899999999 46677
Q ss_pred Eecc-CCcEEEEEEee----CCCeeeecCc-hhhH
Q psy5876 78 KRFN-SPTFCQLRWRP----RPASLLSKEQ-VDKI 106 (143)
Q Consensus 78 ~~~~-~~~v~~l~wsP----~~~~l~s~s~-d~~i 106 (143)
.... .....+++|+| +|++|++++. +++|
T Consensus 216 ~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v 250 (543)
T 1nir_A 216 AEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQF 250 (543)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEE
T ss_pred EEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeE
Confidence 6654 55789999999 9999998874 4444
No 144
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.28 E-value=3.6e-11 Score=93.68 Aligned_cols=100 Identities=14% Similarity=0.179 Sum_probs=72.7
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceE--Eeeec-----cCceEEEEECCCCCEEEEeecCcceec-CCcEEEEee
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSV--MNAAE-----HHQATDVEWDPTGRYVMSGVSLWKTKA-DTGYWQWSF 72 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~--~~~~~-----~~~v~~i~wsPdG~~lat~s~~~~~~~-D~~i~iW~~ 72 (143)
++|||||++|++++. .++.|.+||+++++. +.... ......++|||||++|+++.. . ++.+.+|++
T Consensus 216 ~~~spdg~~l~v~~~-~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~-----~~~~~i~v~~~ 289 (361)
T 3scy_A 216 LIFNSDGKFAYLINE-IGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR-----LKADGVAIFKV 289 (361)
T ss_dssp EEECTTSSEEEEEET-TTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC-----SSSCEEEEEEE
T ss_pred EEEcCCCCEEEEEcC-CCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC-----CCCCEEEEEEE
Confidence 479999999988775 479999999887653 22221 134789999999999977763 4 578999999
Q ss_pred c---CcE--EEecc-CCcEEEEEEeeCCCeeeecCc-hhhH
Q psy5876 73 Q---GKI--IKRFN-SPTFCQLRWRPRPASLLSKEQ-VDKI 106 (143)
Q Consensus 73 ~---g~~--l~~~~-~~~v~~l~wsP~~~~l~s~s~-d~~i 106 (143)
+ |+. +.... ...+.+++|+|+|++|+.++. +..|
T Consensus 290 ~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v 330 (361)
T 3scy_A 290 DETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVI 330 (361)
T ss_dssp CTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEE
T ss_pred cCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCE
Confidence 4 552 32222 346789999999998887763 4443
No 145
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.27 E-value=4.2e-11 Score=95.94 Aligned_cols=93 Identities=17% Similarity=0.305 Sum_probs=78.6
Q ss_pred EecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEEEe
Q psy5876 3 LRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKR 79 (143)
Q Consensus 3 ~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l~~ 79 (143)
.+++|++|++|+ .||+|++||+.+++.+..+. ...+.+++| +|++|++|+ .|+.|++||+. |+++..
T Consensus 262 ~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~------~dg~i~iwd~~~~~~~~~ 331 (435)
T 1p22_A 262 VDFDDKYIVSAS--GDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGS------SDNTIRLWDIECGACLRV 331 (435)
T ss_dssp EEEETTEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEE------TTSCEEEEETTTCCEEEE
T ss_pred EEeCCCEEEEEe--CCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEe------CCCeEEEEECCCCCEEEE
Confidence 345899999999 69999999999988877653 357899988 578999999 69999999995 887776
Q ss_pred c--cCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 80 F--NSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 80 ~--~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
. +...|.+++| ++..|++++.|+.|+
T Consensus 332 ~~~h~~~v~~~~~--~~~~l~sg~~dg~i~ 359 (435)
T 1p22_A 332 LEGHEELVRCIRF--DNKRIVSGAYDGKIK 359 (435)
T ss_dssp ECCCSSCEEEEEC--CSSEEEEEETTSCEE
T ss_pred EeCCcCcEEEEEe--cCCEEEEEeCCCcEE
Confidence 5 4678999988 889999999999875
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.25 E-value=5.5e-11 Score=91.16 Aligned_cols=97 Identities=11% Similarity=0.115 Sum_probs=75.3
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEEEe
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKR 79 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l~~ 79 (143)
++|+|||++|++++. .++.|.+||..+++.+..........++|+|||++++.+.. .++.+.+||.. ++.+..
T Consensus 236 ~~~s~dg~~l~~~~~-~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~-----~~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 236 ISLDTARQRAFITDS-KAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHR-----QAGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp EEEETTTTEEEEEES-SSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEET-----TTTEEEEEETTTTEEEEE
T ss_pred EEECCCCCEEEEEeC-CCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEEC-----CCCeEEEEECCCCeEEEE
Confidence 479999998888774 36899999999988776654333467999999997766663 58899999995 666665
Q ss_pred cc-CCcEEEEEEeeCCCeeeecCch
Q psy5876 80 FN-SPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 80 ~~-~~~v~~l~wsP~~~~l~s~s~d 103 (143)
.. ......++|+|+|+.|+.....
T Consensus 310 ~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 310 FDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EECCSEEEEEEECTTSCEEEEEEEC
T ss_pred EecCCCCCeEEEcCCCCEEEEEEcc
Confidence 54 4578999999999977655443
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.25 E-value=3.4e-11 Score=91.66 Aligned_cols=100 Identities=9% Similarity=0.177 Sum_probs=73.3
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEEC---CCceEEeeec-cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec--C
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDT---GDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ--G 74 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~---~~~~~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~--g 74 (143)
++|+|+|++|++++. .++.|.+||+ .+.+.+.... +..+.+++|+|||++|++++. .++.+.+|++. |
T Consensus 89 ~~~s~dg~~l~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-----~~~~v~~~d~~~~~ 162 (343)
T 1ri6_A 89 ISTDHQGQFVFVGSY-NAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPAL-----KQDRICLFTVSDDG 162 (343)
T ss_dssp EEECTTSSEEEEEET-TTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEG-----GGTEEEEEEECTTS
T ss_pred EEEcCCCCEEEEEec-CCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecC-----CCCEEEEEEecCCC
Confidence 479999999988775 4789999999 4444454443 346889999999999888874 47899999995 5
Q ss_pred cEEE------ecc-CCcEEEEEEeeCCCeee-ecCchhhH
Q psy5876 75 KIIK------RFN-SPTFCQLRWRPRPASLL-SKEQVDKI 106 (143)
Q Consensus 75 ~~l~------~~~-~~~v~~l~wsP~~~~l~-s~s~d~~i 106 (143)
+... ... ...+..++|+|+|+.|+ +...++.|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i 202 (343)
T 1ri6_A 163 HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSV 202 (343)
T ss_dssp CEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred ceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEE
Confidence 4321 122 34788999999999775 44455544
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.23 E-value=1.5e-10 Score=89.43 Aligned_cols=99 Identities=11% Similarity=0.217 Sum_probs=69.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECC---CceEEeeecc-----------CceEEEEECCCCCEEEEeecCcceecCCc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTG---DFSVMNAAEH-----------HQATDVEWDPTGRYVMSGVSLWKTKADTG 66 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~---~~~~~~~~~~-----------~~v~~i~wsPdG~~lat~s~~~~~~~D~~ 66 (143)
++|||||++|++++. .++.|.+||++ +.+.+..... ..+..++|+|||+.+++.. .++.
T Consensus 91 ~a~spdg~~l~~~~~-~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~------~~~~ 163 (347)
T 3hfq_A 91 VAVDEARQLVYSANY-HKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL------GSDK 163 (347)
T ss_dssp EEEETTTTEEEEEET-TTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET------TTTE
T ss_pred EEECCCCCEEEEEeC-CCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC------CCCE
Confidence 479999999999875 47999999986 3333433321 1378899999999555544 5788
Q ss_pred EEEEeec--CcEEE--e--cc-CCcEEEEEEeeCCCeeee-cCchhhH
Q psy5876 67 YWQWSFQ--GKIIK--R--FN-SPTFCQLRWRPRPASLLS-KEQVDKI 106 (143)
Q Consensus 67 i~iW~~~--g~~l~--~--~~-~~~v~~l~wsP~~~~l~s-~s~d~~i 106 (143)
+.+|+++ |++.. . .. ......++|+|+|+.|+. ...+..|
T Consensus 164 v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v 211 (347)
T 3hfq_A 164 VYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQI 211 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred EEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEE
Confidence 9999996 54332 1 12 346788999999996665 4444443
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.23 E-value=3.5e-11 Score=91.94 Aligned_cols=96 Identities=10% Similarity=0.073 Sum_probs=75.2
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeecc-C--ceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-H--QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKI 76 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~-~--~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~ 76 (143)
++++|+++++++++ .+++|.+||..+++.+..... . .+..++|+|||++++.++. .++.+.+||.. |+.
T Consensus 5 ~~~~~~~~~~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~-----~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 5 PALKAGHEYMIVTN--YPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN-----HYGDIYGIDLDTCKN 77 (349)
T ss_dssp CCCCTTCEEEEEEE--TTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET-----TTTEEEEEETTTTEE
T ss_pred ccccCCCEEEEEeC--CCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC-----CCCcEEEEeCCCCcE
Confidence 46889999999988 589999999999887766532 3 5789999999997766553 57899999995 666
Q ss_pred EEeccC-C-------cEEEEEEeeCCCeeeecCch
Q psy5876 77 IKRFNS-P-------TFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 77 l~~~~~-~-------~v~~l~wsP~~~~l~s~s~d 103 (143)
+..... . .+..++|+|+|+.|++++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 112 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNP 112 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEE
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEccc
Confidence 554432 1 26789999999999988754
No 150
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.22 E-value=1.2e-10 Score=97.56 Aligned_cols=99 Identities=10% Similarity=0.159 Sum_probs=79.2
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEEC--CCceEEeeecc-CceEEEEECC----CCCEEEEeecCcceecCCcEEEEee-
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDT--GDFSVMNAAEH-HQATDVEWDP----TGRYVMSGVSLWKTKADTGYWQWSF- 72 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~--~~~~~~~~~~~-~~v~~i~wsP----dG~~lat~s~~~~~~~D~~i~iW~~- 72 (143)
++|||||++|++++ .|++|.+||+ .+++++.+... ..+..++||| ||+++++++. .+++|.+||.
T Consensus 184 v~~spdg~~l~v~~--~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~-----~~~~v~v~D~~ 256 (543)
T 1nir_A 184 SRMSASGRYLLVIG--RDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAY-----WPPQFAIMDGE 256 (543)
T ss_dssp EEECTTSCEEEEEE--TTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE-----ESSEEEEEETT
T ss_pred EEECCCCCEEEEEC--CCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEc-----cCCeEEEEecc
Confidence 46999999999999 5799999999 78888777643 5689999999 9999999984 4899999998
Q ss_pred cCcEEEecc-------------CCcEEEEEEeeCCCe-eeecCchhhH
Q psy5876 73 QGKIIKRFN-------------SPTFCQLRWRPRPAS-LLSKEQVDKI 106 (143)
Q Consensus 73 ~g~~l~~~~-------------~~~v~~l~wsP~~~~-l~s~s~d~~i 106 (143)
+++++.... ...+.++.++|+++. +++..++++|
T Consensus 257 t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i 304 (543)
T 1nir_A 257 TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV 304 (543)
T ss_dssp TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred ccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeE
Confidence 477766542 126899999998765 5566666655
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.22 E-value=4.9e-11 Score=90.57 Aligned_cols=99 Identities=13% Similarity=0.032 Sum_probs=72.8
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeecc-C------ceEEEEECCCCCEEEEeecCc----cee--cCCcE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-H------QATDVEWDPTGRYVMSGVSLW----KTK--ADTGY 67 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~-~------~v~~i~wsPdG~~lat~s~~~----~~~--~D~~i 67 (143)
++|||||++|++++. .++.|.+||+.+++.+..... . .+..++|+|||++|++++... ... .++.+
T Consensus 39 ~~~s~dg~~l~v~~~-~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i 117 (337)
T 1pby_B 39 PMVAPGGRIAYATVN-KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRV 117 (337)
T ss_dssp EEECTTSSEEEEEET-TTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEE
T ss_pred eEEcCCCCEEEEEeC-CCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceE
Confidence 479999998766654 478999999998887655431 1 567899999999998885210 000 26899
Q ss_pred EEEeec-CcEEEecc-CCcEEEEEEeeCCCeeeec
Q psy5876 68 WQWSFQ-GKIIKRFN-SPTFCQLRWRPRPASLLSK 100 (143)
Q Consensus 68 ~iW~~~-g~~l~~~~-~~~v~~l~wsP~~~~l~s~ 100 (143)
.+||.. ++.+.... ...+..++|+|+|+.|+.+
T Consensus 118 ~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 118 ALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL 152 (337)
T ss_dssp EEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE
T ss_pred EEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe
Confidence 999996 55555443 4567889999999988876
No 152
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.22 E-value=8.8e-11 Score=89.77 Aligned_cols=98 Identities=12% Similarity=0.130 Sum_probs=71.7
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceE-Eeeec-cCceEE-EEECCCCCEEEEeecCcceecC-C--cEEEEeec-
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSV-MNAAE-HHQATD-VEWDPTGRYVMSGVSLWKTKAD-T--GYWQWSFQ- 73 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~-~~~~~-~~~v~~-i~wsPdG~~lat~s~~~~~~~D-~--~i~iW~~~- 73 (143)
++|||||++|++++. .++.|.+||..+++. ..... +..... ++|+|||++|+++. .+ + .+.+||..
T Consensus 45 ~~~s~dg~~l~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~------~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 45 TAITSDCSNVVVTSD-FCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVT------GLNHPFNMQSYSFLK 117 (331)
T ss_dssp EEECSSSCEEEEEES-TTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECC------CSSSSCEEEEEETTT
T ss_pred EEEcCCCCEEEEEeC-CCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEec------CCCCcccEEEEECCC
Confidence 479999998888775 478999999988775 44332 334445 99999999999544 23 3 89999995
Q ss_pred CcEEEecc-CCcEEEEEEeeCCCeeeec-Cchhh
Q psy5876 74 GKIIKRFN-SPTFCQLRWRPRPASLLSK-EQVDK 105 (143)
Q Consensus 74 g~~l~~~~-~~~v~~l~wsP~~~~l~s~-s~d~~ 105 (143)
++.+.... ......++|+|+|+.|+.. ..+..
T Consensus 118 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 151 (331)
T 3u4y_A 118 NKFISTIPIPYDAVGIAISPNGNGLILIDRSSAN 151 (331)
T ss_dssp TEEEEEEECCTTEEEEEECTTSSCEEEEEETTTT
T ss_pred CCeEEEEECCCCccceEECCCCCEEEEEecCCCc
Confidence 66665543 4567999999999866654 33344
No 153
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.22 E-value=2.5e-11 Score=100.75 Aligned_cols=99 Identities=9% Similarity=0.016 Sum_probs=68.3
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEEec-
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF- 80 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~~~- 80 (143)
+|||||+.++..+. .++.+.+||+++++......+.. .+++|||||++||+++.... ....+++||+++..+...
T Consensus 116 ~~s~dg~~~~~~s~-~~~~~~l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~--~~~~i~~~d~~~g~~~~l~ 191 (582)
T 3o4h_A 116 SGVDTGEAVVFTGA-TEDRVALYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGG--GRVSLFTSNLSSGGLRVFD 191 (582)
T ss_dssp EEEECSSCEEEEEE-CSSCEEEEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEEET--TEEEEEEEETTTCCCEEEC
T ss_pred eeCCCCCeEEEEec-CCCCceEEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCC--CCeEEEEEcCCCCCceEee
Confidence 68999975443322 24556699998877544333233 88999999999998874100 015689999864333332
Q ss_pred -cCCcEEEEEEeeCCCeeeecCchh
Q psy5876 81 -NSPTFCQLRWRPRPASLLSKEQVD 104 (143)
Q Consensus 81 -~~~~v~~l~wsP~~~~l~s~s~d~ 104 (143)
+...+..++|+|||+.|++.+.++
T Consensus 192 ~~~~~~~~~~~SpDG~~l~~~~~~~ 216 (582)
T 3o4h_A 192 SGEGSFSSASISPGMKVTAGLETAR 216 (582)
T ss_dssp CSSCEEEEEEECTTSCEEEEEECSS
T ss_pred cCCCccccceECCCCCEEEEccCCC
Confidence 356789999999999999776666
No 154
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.22 E-value=4.9e-11 Score=102.34 Aligned_cols=98 Identities=9% Similarity=0.145 Sum_probs=72.2
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeecc--C---c--eEEEEECCCCCEEEEeecC---cceecCCcEEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH--H---Q--ATDVEWDPTGRYVMSGVSL---WKTKADTGYWQW 70 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~--~---~--v~~i~wsPdG~~lat~s~~---~~~~~D~~i~iW 70 (143)
++|+|||++|+++ ||+|++||+.+++....+.. . . ..+++|||||++|+.++.. ++....+.+++|
T Consensus 22 ~~w~~dg~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~ 97 (740)
T 4a5s_A 22 LRWISDHEYLYKQ----ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (740)
T ss_dssp EEECSSSEEEEEE----TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred cEECCCCcEEEEc----CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEE
Confidence 4799999999885 68999999998876544321 1 2 2458999999999998842 122223567899
Q ss_pred eecCcEEEecc--CCcEEEEEEeeCCCeeeecCc
Q psy5876 71 SFQGKIIKRFN--SPTFCQLRWRPRPASLLSKEQ 102 (143)
Q Consensus 71 ~~~g~~l~~~~--~~~v~~l~wsP~~~~l~s~s~ 102 (143)
|+.+..+.... ...+...+|||||+.|+.+++
T Consensus 98 d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~ 131 (740)
T 4a5s_A 98 DLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWN 131 (740)
T ss_dssp ETTTTEECCSSCCCTTEEEEEECSSTTCEEEEET
T ss_pred ECCCCcEEEcccCCCcceeeEECCCCCEEEEEEC
Confidence 99766554442 567999999999999998753
No 155
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.21 E-value=1.6e-10 Score=88.59 Aligned_cols=100 Identities=16% Similarity=0.268 Sum_probs=76.0
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec------cCceEEEEECCCCCEEEEeecCcceecCCcEEEEee-c
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE------HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-Q 73 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~------~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~ 73 (143)
++|+|||++|++++ .++.|.+||..+++.+.... ...+..++|+|||++++.++. .++.+.+||. +
T Consensus 190 ~~~s~dg~~l~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-----~~~~v~~~d~~~ 262 (353)
T 3vgz_A 190 LALDSEGKRLYTTN--ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS-----KAAEVLVVDTRN 262 (353)
T ss_dssp CEEETTTTEEEEEC--TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES-----SSSEEEEEETTT
T ss_pred EEECCCCCEEEEEc--CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC-----CCCEEEEEECCC
Confidence 57999999999988 58999999999988766542 235788999999998887774 4689999999 4
Q ss_pred CcEEEeccCCcEEEEEEeeCCCeee-ecCchhhHH
Q psy5876 74 GKIIKRFNSPTFCQLRWRPRPASLL-SKEQVDKIK 107 (143)
Q Consensus 74 g~~l~~~~~~~v~~l~wsP~~~~l~-s~s~d~~i~ 107 (143)
|+.+.......-..++|+|+|+.++ +...++.|.
T Consensus 263 ~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~ 297 (353)
T 3vgz_A 263 GNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVS 297 (353)
T ss_dssp CCEEEEEECSSCCCEEEETTTTEEEEEETTTTEEE
T ss_pred CcEEEEEEcCCCceEEECCCCCEEEEEECCCCeEE
Confidence 7776655433335799999999654 444555543
No 156
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.20 E-value=2.3e-10 Score=87.44 Aligned_cols=100 Identities=7% Similarity=0.079 Sum_probs=72.2
Q ss_pred CeEecCCCEEEEEecCCC-C--eEEEEECCCceEEeeec-cCceEEEEECCCCCEEEEeecCcceecCCc-EEEEeec--
Q psy5876 1 MKLRMRGTHIVLAELRDT-G--SLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTG-YWQWSFQ-- 73 (143)
Q Consensus 1 i~~SPdG~~las~~~~~d-g--~i~iWd~~~~~~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~-i~iW~~~-- 73 (143)
++|||||++|+++. .+ + .|.+||+.+++.+...+ +.....++|+|||++|++++. .++. +.+|+++
T Consensus 89 ~~~s~dg~~l~~~~--~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~-----~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 89 VDITPDDQFAVTVT--GLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDR-----SSANTVRRFKIDAD 161 (331)
T ss_dssp EEECTTSSEEEECC--CSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEE-----TTTTEEEEEEECTT
T ss_pred eEECCCCCEEEEec--CCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEec-----CCCceEEEEEECCC
Confidence 47999999999554 23 3 89999999988877654 346799999999997776653 4577 9999985
Q ss_pred CcEEE----ec-cCCcEEEEEEeeCCCee-eecCchhhHH
Q psy5876 74 GKIIK----RF-NSPTFCQLRWRPRPASL-LSKEQVDKIK 107 (143)
Q Consensus 74 g~~l~----~~-~~~~v~~l~wsP~~~~l-~s~s~d~~i~ 107 (143)
|.... .. .......++|+|+|+.| ++...++.|+
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 201 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIG 201 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEE
Confidence 33321 11 24568999999999965 4554555543
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.20 E-value=3.1e-10 Score=88.34 Aligned_cols=96 Identities=8% Similarity=0.175 Sum_probs=68.6
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCce-------E-------Eeee-ccCceEEEEECCCCCEEEEeecCcceecCC
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFS-------V-------MNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADT 65 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~-------~-------~~~~-~~~~v~~i~wsPdG~~lat~s~~~~~~~D~ 65 (143)
++|||||++|++++. .++.|.+|+++... + .... .......++|||||+++++++. .++
T Consensus 160 ~~~spdg~~l~~~~~-~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-----~~~ 233 (361)
T 3scy_A 160 VRITPDGKYLLADDL-GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINE-----IGG 233 (361)
T ss_dssp EEECTTSSEEEEEET-TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET-----TTC
T ss_pred EEECCCCCEEEEEeC-CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcC-----CCC
Confidence 479999998888775 47899999876322 1 1122 2346889999999999888774 478
Q ss_pred cEEEEeec-CcE--EEecc-----CCcEEEEEEeeCCCeeeecCc
Q psy5876 66 GYWQWSFQ-GKI--IKRFN-----SPTFCQLRWRPRPASLLSKEQ 102 (143)
Q Consensus 66 ~i~iW~~~-g~~--l~~~~-----~~~v~~l~wsP~~~~l~s~s~ 102 (143)
.+.+|+++ |++ +.... ......++|+|||+.|+....
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC
T ss_pred eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC
Confidence 99999996 433 22221 245789999999998865443
No 158
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.18 E-value=3.8e-11 Score=101.34 Aligned_cols=92 Identities=16% Similarity=0.084 Sum_probs=70.5
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec-cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecC-----
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQG----- 74 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g----- 74 (143)
++|||| ++++.+. +++|++||+.+++...... ...+.+++|||||++||++. |+.|++|++.+
T Consensus 87 ~~~spd-~~~~~~~---~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~-------~~~i~v~~~~~~~~~~ 155 (706)
T 2z3z_A 87 TLDAGR-GLVVLFT---QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVR-------NHNLYIARGGKLGEGM 155 (706)
T ss_dssp EEETTT-TEEEEEE---TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEE-------TTEEEEEECBCTTSCC
T ss_pred EEECCC-CeEEEEE---CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEE-------CCeEEEEecCcccccC
Confidence 479999 7777765 6999999999887655443 34688899999999999965 78999999964
Q ss_pred -cEEEecc--CCc--------------EEEEEEeeCCCeeeecCch
Q psy5876 75 -KIIKRFN--SPT--------------FCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 75 -~~l~~~~--~~~--------------v~~l~wsP~~~~l~s~s~d 103 (143)
+...... ... +.+++|+|||+.|++++.|
T Consensus 156 g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d 201 (706)
T 2z3z_A 156 SRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMD 201 (706)
T ss_dssp CCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEE
T ss_pred CCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEEC
Confidence 4443222 222 4789999999999988743
No 159
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.18 E-value=2.6e-10 Score=88.13 Aligned_cols=99 Identities=9% Similarity=0.166 Sum_probs=68.4
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECC-CceEE--eee---ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTG-DFSVM--NAA---EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ- 73 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~-~~~~~--~~~---~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~- 73 (143)
++|||||+ |++++. .++.|.+||+. +++.. ... ....+..++|+|||+++++++. .++.+.+|+++
T Consensus 146 ~~~spdg~-l~v~~~-~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~-----~~~~v~v~~~~~ 218 (347)
T 3hfq_A 146 TDLTPDNR-LAVIDL-GSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE-----LSSQIASLKYDT 218 (347)
T ss_dssp EEECTTSC-EEEEET-TTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEET-----TTTEEEEEEEET
T ss_pred EEECCCCc-EEEEeC-CCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeC-----CCCEEEEEEecC
Confidence 47999999 555544 47899999988 55432 211 1236788999999998877664 57899999986
Q ss_pred --CcE--EEecc--C------CcEEEEEEeeCCCee-eecCchhhH
Q psy5876 74 --GKI--IKRFN--S------PTFCQLRWRPRPASL-LSKEQVDKI 106 (143)
Q Consensus 74 --g~~--l~~~~--~------~~v~~l~wsP~~~~l-~s~s~d~~i 106 (143)
|+. +.... . ..+..++|+|+|+.| ++...+..|
T Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v 264 (347)
T 3hfq_A 219 QTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTL 264 (347)
T ss_dssp TTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEE
T ss_pred CCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEE
Confidence 432 22211 1 358899999999987 455445444
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.17 E-value=9.1e-11 Score=89.63 Aligned_cols=100 Identities=12% Similarity=0.036 Sum_probs=69.8
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeecc--------CceEEEEECCCCCEEEEeecCc-----ce-ecCCc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH--------HQATDVEWDPTGRYVMSGVSLW-----KT-KADTG 66 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~--------~~v~~i~wsPdG~~lat~s~~~-----~~-~~D~~ 66 (143)
++|+|||+++++++. .++.|.+||+.+++.+...+. ..+..++|+|||++|++++... .+ ..++.
T Consensus 48 ~~~s~dg~~~~v~~~-~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 126 (349)
T 1jmx_B 48 AMMAPDNRTAYVLNN-HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR 126 (349)
T ss_dssp EEECTTSSEEEEEET-TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCE
T ss_pred eEECCCCCEEEEEeC-CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCe
Confidence 479999998766653 479999999999887655432 1278899999999999988310 00 01478
Q ss_pred EEEEeec-CcEE---Eec-cCCcEEEEEEeeCCCeeeecCc
Q psy5876 67 YWQWSFQ-GKII---KRF-NSPTFCQLRWRPRPASLLSKEQ 102 (143)
Q Consensus 67 i~iW~~~-g~~l---~~~-~~~~v~~l~wsP~~~~l~s~s~ 102 (143)
+.+||+. |+.. ... ....+.+++|+|+|+ ++..+.
T Consensus 127 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~ 166 (349)
T 1jmx_B 127 LEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP 166 (349)
T ss_dssp EEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS
T ss_pred EEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC
Confidence 9999995 3322 222 244688899999999 554443
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.17 E-value=4.4e-10 Score=88.42 Aligned_cols=96 Identities=13% Similarity=0.075 Sum_probs=70.6
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECC-CceEE--eeec----cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTG-DFSVM--NAAE----HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ 73 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~-~~~~~--~~~~----~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~ 73 (143)
++|||||++|++++. .++.|.+||++ +++.. .... ...+..++|||||+++++++. .++.+.+|+++
T Consensus 150 ~~~spdG~~l~~~~~-~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~-----~~~~v~v~~~~ 223 (365)
T 1jof_A 150 MVFDPTETYLYSADL-TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME-----AGNRICEYVID 223 (365)
T ss_dssp EEECTTSSEEEEEET-TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET-----TTTEEEEEEEC
T ss_pred EEECCCCCEEEEEcC-CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC-----CCCeEEEEEEe
Confidence 479999999988875 36799999998 66542 2221 346899999999999988874 47889999874
Q ss_pred ---CcEEE------eccC-----C-------cEEEEE-EeeCCCeeeecCc
Q psy5876 74 ---GKIIK------RFNS-----P-------TFCQLR-WRPRPASLLSKEQ 102 (143)
Q Consensus 74 ---g~~l~------~~~~-----~-------~v~~l~-wsP~~~~l~s~s~ 102 (143)
|++.. .... . .+..++ |+|||+.|+.+..
T Consensus 224 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~ 274 (365)
T 1jof_A 224 PATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp TTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred CCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC
Confidence 65421 1211 2 488999 9999998876543
No 162
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.16 E-value=5.3e-11 Score=101.45 Aligned_cols=104 Identities=13% Similarity=0.079 Sum_probs=71.1
Q ss_pred CeEecCCCEEEEEecC---CCCeEEEEECCCceEE-ee-eccCceEEEEECCCCCEEEEeecCcc-------eecCCcEE
Q psy5876 1 MKLRMRGTHIVLAELR---DTGSLEFVDTGDFSVM-NA-AEHHQATDVEWDPTGRYVMSGVSLWK-------TKADTGYW 68 (143)
Q Consensus 1 i~~SPdG~~las~~~~---~dg~i~iWd~~~~~~~-~~-~~~~~v~~i~wsPdG~~lat~s~~~~-------~~~D~~i~ 68 (143)
++|||||++||.+... .+.+|++||+.+++.+ .. .+......++|||||+.|+.++.... ......|+
T Consensus 126 ~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~ 205 (695)
T 2bkl_A 126 WAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIR 205 (695)
T ss_dssp EEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEE
T ss_pred EEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEE
Confidence 3799999999954321 3468999999998765 21 11122378999999999999884110 00012399
Q ss_pred EEeec-Cc----EEEecc--CCcEEEEEEeeCCCeeeecCchh
Q psy5876 69 QWSFQ-GK----IIKRFN--SPTFCQLRWRPRPASLLSKEQVD 104 (143)
Q Consensus 69 iW~~~-g~----~l~~~~--~~~v~~l~wsP~~~~l~s~s~d~ 104 (143)
+|++. +. ++.... ...+..+.|+|||+.|+..+.+.
T Consensus 206 ~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 248 (695)
T 2bkl_A 206 YHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG 248 (695)
T ss_dssp EEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET
T ss_pred EEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC
Confidence 99984 33 455443 34788999999999998776554
No 163
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.15 E-value=1.9e-10 Score=98.19 Aligned_cols=101 Identities=8% Similarity=0.119 Sum_probs=70.6
Q ss_pred CeEecCCCEEEEEecCCCC----eEEEEECCCceEEee-eccCceEEEEECCCCCEEEEeecCcce----------ecCC
Q psy5876 1 MKLRMRGTHIVLAELRDTG----SLEFVDTGDFSVMNA-AEHHQATDVEWDPTGRYVMSGVSLWKT----------KADT 65 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg----~i~iWd~~~~~~~~~-~~~~~v~~i~wsPdG~~lat~s~~~~~----------~~D~ 65 (143)
++|||||++||.+.. ..| +|++||+.+++.+.. .++..+..++|||||+.|+.++....- ....
T Consensus 130 ~~~SPDg~~la~~~~-~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (710)
T 2xdw_A 130 YAFSEDGEYFAYGLS-ASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQ 208 (710)
T ss_dssp EEECTTSSEEEEEEE-ETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCC
T ss_pred EEECCCCCEEEEEEc-CCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCC
Confidence 379999999998753 123 899999999886642 333346789999999999998842100 0012
Q ss_pred cEEEEeec-Cc----EEEecc--CCcEEEEEEeeCCCeeeecCc
Q psy5876 66 GYWQWSFQ-GK----IIKRFN--SPTFCQLRWRPRPASLLSKEQ 102 (143)
Q Consensus 66 ~i~iW~~~-g~----~l~~~~--~~~v~~l~wsP~~~~l~s~s~ 102 (143)
.|++|++. +. ++.... ...+..+.|+|||+.|+..+.
T Consensus 209 ~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 209 KLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred EEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 38999984 33 344432 345789999999999987654
No 164
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.14 E-value=1.5e-10 Score=89.17 Aligned_cols=102 Identities=14% Similarity=0.299 Sum_probs=66.9
Q ss_pred CeEecCCCEEEEEecCC-CC--eEEEEECCCceEEeeeccCceEEEEECCCCCEEEEeecCcc------------e----
Q psy5876 1 MKLRMRGTHIVLAELRD-TG--SLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWK------------T---- 61 (143)
Q Consensus 1 i~~SPdG~~las~~~~~-dg--~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~------------~---- 61 (143)
++|||||++||.++... ++ .|.+||+.+++.........+..++|||||++|+.++.... +
T Consensus 64 ~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g 143 (347)
T 2gop_A 64 PRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDD 143 (347)
T ss_dssp EEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEECCCC---------CCCC---
T ss_pred eEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecC
Confidence 37999999999876311 13 47778888776543322222999999999999998873200 0
Q ss_pred -----ecCCcEEEEeecCcEE-EeccCCcEEEEEEeeCCCeeeecCch
Q psy5876 62 -----KADTGYWQWSFQGKII-KRFNSPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 62 -----~~D~~i~iW~~~g~~l-~~~~~~~v~~l~wsP~~~~l~s~s~d 103 (143)
.....+++|++.+... .......+..++|+|+| .++++..+
T Consensus 144 ~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~~ 190 (347)
T 2gop_A 144 LGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IVVNVPHR 190 (347)
T ss_dssp ------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EEEEEECC
T ss_pred cccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EEEEEecc
Confidence 0124688899964332 33211277889999999 77776543
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.12 E-value=2.1e-10 Score=96.16 Aligned_cols=102 Identities=13% Similarity=0.068 Sum_probs=71.7
Q ss_pred CeEecCCCEEEEEecCCC----------CeEEEEECCC------ceEEeee--ccCceEEEEECCCCCEEEEeecCcc-e
Q psy5876 1 MKLRMRGTHIVLAELRDT----------GSLEFVDTGD------FSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWK-T 61 (143)
Q Consensus 1 i~~SPdG~~las~~~~~d----------g~i~iWd~~~------~~~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~-~ 61 (143)
++|||||++|+.++. + ..|.+||+++ ++..... ++..+..++|||||++||.++.... .
T Consensus 135 ~~~spDg~~l~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~ 212 (662)
T 3azo_A 135 PVLLPERGEVWCMAE--EFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRM 212 (662)
T ss_dssp EEEETTTTEEEEEEE--EECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCC
T ss_pred cEECCCCCEEEEEEe--cccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCC
Confidence 479999999998873 4 5899999887 5433222 2356788999999999998873210 0
Q ss_pred e-cCCcEEEEeecC-c---EEEec---cCCcEEEEEEeeCCCeeeecCchh
Q psy5876 62 K-ADTGYWQWSFQG-K---IIKRF---NSPTFCQLRWRPRPASLLSKEQVD 104 (143)
Q Consensus 62 ~-~D~~i~iW~~~g-~---~l~~~---~~~~v~~l~wsP~~~~l~s~s~d~ 104 (143)
. ....+++|++++ . ..... +...+..++|+|||+.+++...++
T Consensus 213 ~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~ 263 (662)
T 3azo_A 213 PWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTG 263 (662)
T ss_dssp TTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTS
T ss_pred CCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCC
Confidence 0 124799999973 2 22222 246799999999999777776665
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.05 E-value=1.6e-09 Score=85.14 Aligned_cols=101 Identities=13% Similarity=0.140 Sum_probs=70.2
Q ss_pred CeEecCCCE--EEEEe------cC-----CCCeEEEEECC-CceEEeee------ccCceEEEEECCCCCEEEEeecCcc
Q psy5876 1 MKLRMRGTH--IVLAE------LR-----DTGSLEFVDTG-DFSVMNAA------EHHQATDVEWDPTGRYVMSGVSLWK 60 (143)
Q Consensus 1 i~~SPdG~~--las~~------~~-----~dg~i~iWd~~-~~~~~~~~------~~~~v~~i~wsPdG~~lat~s~~~~ 60 (143)
++|||||++ +++++ .+ .+|++.+|+++ ++++.... +...+..++|||||++|+++..
T Consensus 88 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~--- 164 (365)
T 1jof_A 88 NDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL--- 164 (365)
T ss_dssp GCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET---
T ss_pred EEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC---
Confidence 468999995 44542 10 27899999987 45543221 2346899999999999987763
Q ss_pred eecCCcEEEEeec--CcEE--Eecc----CCcEEEEEEeeCCCeeeecCc-hhhH
Q psy5876 61 TKADTGYWQWSFQ--GKII--KRFN----SPTFCQLRWRPRPASLLSKEQ-VDKI 106 (143)
Q Consensus 61 ~~~D~~i~iW~~~--g~~l--~~~~----~~~v~~l~wsP~~~~l~s~s~-d~~i 106 (143)
.++.|++|+++ |++. .... .....+++|+|+|+.|+..++ +..|
T Consensus 165 --~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v 217 (365)
T 1jof_A 165 --TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRI 217 (365)
T ss_dssp --TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred --CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeE
Confidence 46789999995 6542 2221 456899999999998876553 4443
No 167
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.02 E-value=6.4e-10 Score=98.70 Aligned_cols=94 Identities=7% Similarity=-0.001 Sum_probs=73.9
Q ss_pred CeEecCCCEEEEEecCCCCeEE-EEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLE-FVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~-iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l 77 (143)
++|| ||+.|+.++ .++.+. +||..+++......+ ..+..++|||||++||+++ .++.+++||+. |+..
T Consensus 343 ~~~s-dg~~l~~~s--~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~------~~~~v~~~d~~tg~~~ 413 (1045)
T 1k32_A 343 RGGD-TKVAFIHGT--REGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVAN------DRFEIMTVDLETGKPT 413 (1045)
T ss_dssp ECSS-SEEEEEEEE--TTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEE------TTSEEEEEETTTCCEE
T ss_pred eeEc-CCCeEEEEE--CCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEEC------CCCeEEEEECCCCceE
Confidence 3689 999999988 467888 889887654332233 5789999999999999998 58899999995 5544
Q ss_pred Eec--cCCcEEEEEEeeCCCeeeecCch
Q psy5876 78 KRF--NSPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 78 ~~~--~~~~v~~l~wsP~~~~l~s~s~d 103 (143)
... +...+.+++|+|||+.|++++.+
T Consensus 414 ~~~~~~~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 414 VIERSREAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp EEEECSSSCCCCEEECTTSCEEEEEEEE
T ss_pred EeccCCCCCccceEECCCCCeEEEEecC
Confidence 333 45678999999999999987664
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.98 E-value=4.7e-09 Score=81.76 Aligned_cols=92 Identities=7% Similarity=-0.040 Sum_probs=66.0
Q ss_pred eEecCCCEEEEEecCCCC--eEEEEECCCceEEeeecc--CceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcE
Q psy5876 2 KLRMRGTHIVLAELRDTG--SLEFVDTGDFSVMNAAEH--HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKI 76 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg--~i~iWd~~~~~~~~~~~~--~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~ 76 (143)
+|||||++||.++. .+| .|.+||+.+++....... ..+..++|||||++|+.++ .+..+++||+. |+.
T Consensus 42 ~~SpDg~~l~~~~~-~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~------~~~~l~~~d~~~g~~ 114 (388)
T 3pe7_A 42 CFTRDGSKLLFGGA-FDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVK------DGRNLMRVDLATLEE 114 (388)
T ss_dssp CBCTTSCEEEEEEC-TTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEE------TTTEEEEEETTTCCE
T ss_pred cCCCCCCEEEEEEc-CCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEe------CCCeEEEEECCCCcc
Confidence 69999999999884 256 488889988876554332 2344678999999999999 47789999996 443
Q ss_pred E--EeccCCcEEEEE--EeeCCCeeeec
Q psy5876 77 I--KRFNSPTFCQLR--WRPRPASLLSK 100 (143)
Q Consensus 77 l--~~~~~~~v~~l~--wsP~~~~l~s~ 100 (143)
. ...+...+.... ++|++..++..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~dg~~l~~~ 142 (388)
T 3pe7_A 115 NVVYQVPAEWVGYGTWVANSDCTKLVGI 142 (388)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEE
T ss_pred eeeeechhhcccccceeECCCCCeeccc
Confidence 3 333344444444 48999988754
No 169
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.97 E-value=1.5e-09 Score=82.21 Aligned_cols=87 Identities=17% Similarity=0.213 Sum_probs=67.2
Q ss_pred CEEEEEecCCCCeEEEEECCCceEEeeecc-C---ceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEEEecc-
Q psy5876 8 THIVLAELRDTGSLEFVDTGDFSVMNAAEH-H---QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRFN- 81 (143)
Q Consensus 8 ~~las~~~~~dg~i~iWd~~~~~~~~~~~~-~---~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l~~~~- 81 (143)
++|++++ .++.|.+||..+++.+..... . .+..++|+|||++++.++. .++.+.+||+ +|+.+....
T Consensus 2 ~~~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~-----~~~~v~~~d~~~~~~~~~~~~ 74 (337)
T 1pby_B 2 DYILAPA--RPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVN-----KSESLVKIDLVTGETLGRIDL 74 (337)
T ss_dssp EEEEEEE--TTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEET-----TTTEEEEEETTTCCEEEEEEC
T ss_pred cEEEEcC--CCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeC-----CCCeEEEEECCCCCeEeeEEc
Confidence 4788887 589999999999888776542 3 4889999999998766553 4789999999 467665443
Q ss_pred CC------cEEEEEEeeCCCeeeecC
Q psy5876 82 SP------TFCQLRWRPRPASLLSKE 101 (143)
Q Consensus 82 ~~------~v~~l~wsP~~~~l~s~s 101 (143)
.. .+..++|+|+|+.|+.+.
T Consensus 75 ~~~~~~~~~~~~~~~s~dg~~l~~~~ 100 (337)
T 1pby_B 75 STPEERVKSLFGAALSPDGKTLAIYE 100 (337)
T ss_dssp CBTTEEEECTTCEEECTTSSEEEEEE
T ss_pred CCcccccccccceEECCCCCEEEEEe
Confidence 22 567899999999888774
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.92 E-value=1.2e-08 Score=80.80 Aligned_cols=87 Identities=10% Similarity=0.117 Sum_probs=68.7
Q ss_pred CeEecCCCEEEEEec-C--------CCCeEEEEECCCceEEeeec-cCceEEEEECCCCCEEEEeecCcceecCCcEEEE
Q psy5876 1 MKLRMRGTHIVLAEL-R--------DTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQW 70 (143)
Q Consensus 1 i~~SPdG~~las~~~-~--------~dg~i~iWd~~~~~~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW 70 (143)
++|+|||+++.++.. + ..++|.+||+.+++.+.+.+ +. +..++|||||++|++++ . +.+.+|
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n------~-~~v~v~ 330 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLD------G-GNVNVY 330 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEEC------S-SCEEEE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeC------C-CeEEEE
Confidence 368999898877642 0 13489999999999888764 34 99999999999999877 3 899999
Q ss_pred ee-cC--cEEEec-c-CCcEEEEEEeeCCC
Q psy5876 71 SF-QG--KIIKRF-N-SPTFCQLRWRPRPA 95 (143)
Q Consensus 71 ~~-~g--~~l~~~-~-~~~v~~l~wsP~~~ 95 (143)
|. +| +.+... . ...-..++++|+|.
T Consensus 331 D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 331 DISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp ECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred ECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 98 57 777774 3 45678899999986
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.91 E-value=2.1e-09 Score=90.03 Aligned_cols=100 Identities=10% Similarity=0.026 Sum_probs=66.5
Q ss_pred ecCCCE-EEEEecCCCCeEEEEECC--C-ceE--Eeee----ccCceEEEEECCCCCEEEEeecCcce----ecCCcEEE
Q psy5876 4 RMRGTH-IVLAELRDTGSLEFVDTG--D-FSV--MNAA----EHHQATDVEWDPTGRYVMSGVSLWKT----KADTGYWQ 69 (143)
Q Consensus 4 SPdG~~-las~~~~~dg~i~iWd~~--~-~~~--~~~~----~~~~v~~i~wsPdG~~lat~s~~~~~----~~D~~i~i 69 (143)
||||++ |+.++. .+..|.+++++ . ++. +... +...+..++|||||++|++++....- .....+++
T Consensus 87 SPDg~~~la~~~~-~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~ 165 (662)
T 3azo_A 87 RPAGGPLLVFTHF-GDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAA 165 (662)
T ss_dssp CSSSSCEEEEEBT-TTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEE
T ss_pred ecCCCeEEEEEEC-CCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEE
Confidence 399999 887763 35677777776 2 332 2221 22457899999999999998842000 01157889
Q ss_pred EeecC------cEEEec---cCCcEEEEEEeeCCCeeeecCchh
Q psy5876 70 WSFQG------KIIKRF---NSPTFCQLRWRPRPASLLSKEQVD 104 (143)
Q Consensus 70 W~~~g------~~l~~~---~~~~v~~l~wsP~~~~l~s~s~d~ 104 (143)
|++++ ..+... ....+..++|+|||+.|+..+.+.
T Consensus 166 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~ 209 (662)
T 3azo_A 166 VPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDH 209 (662)
T ss_dssp EETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECT
T ss_pred EECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCC
Confidence 99976 433322 245688899999999999776543
No 172
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.90 E-value=3e-09 Score=82.65 Aligned_cols=102 Identities=8% Similarity=0.028 Sum_probs=65.7
Q ss_pred CeEecCCCEEEEEecC-CC--CeEEEEECCCceEEeeeccCceEEEEECC-CCCEEEEeecCc----------ceecCCc
Q psy5876 1 MKLRMRGTHIVLAELR-DT--GSLEFVDTGDFSVMNAAEHHQATDVEWDP-TGRYVMSGVSLW----------KTKADTG 66 (143)
Q Consensus 1 i~~SPdG~~las~~~~-~d--g~i~iWd~~~~~~~~~~~~~~v~~i~wsP-dG~~lat~s~~~----------~~~~D~~ 66 (143)
++|||||++|+.++.. .. +.|.+||+.+++........... ++|+| ||+++++++... ....+..
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~ 321 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPF 321 (396)
T ss_dssp EEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEE-EEEECSSSSEEEEEECCC----------CCCCCCE
T ss_pred eEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCc
Confidence 3799999998887531 11 45999999877543322222334 89999 999988765310 0013468
Q ss_pred EEEEeecCcEEEec--cCC-----------cEEEEEEeeCCCeeeecCch
Q psy5876 67 YWQWSFQGKIIKRF--NSP-----------TFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 67 i~iW~~~g~~l~~~--~~~-----------~v~~l~wsP~~~~l~s~s~d 103 (143)
+++||+.+..+... +.. .+..++|+|+|+.|+..+..
T Consensus 322 i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~ 371 (396)
T 3c5m_A 322 LYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDF 371 (396)
T ss_dssp EEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT
T ss_pred EEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecC
Confidence 99999964432222 122 25668999999999877653
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.89 E-value=1.5e-08 Score=76.24 Aligned_cols=96 Identities=5% Similarity=0.132 Sum_probs=72.6
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec----cCceEEEEECCCCCEEEEeecCcceecCC-cEEEEeecCc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE----HHQATDVEWDPTGRYVMSGVSLWKTKADT-GYWQWSFQGK 75 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~----~~~v~~i~wsPdG~~lat~s~~~~~~~D~-~i~iW~~~g~ 75 (143)
|+++|+|+.+++.. .++.|.+||.+. +.+..+. ...+..++++|+|+++++.. .++ .|.+|+.+|+
T Consensus 169 i~~~~~g~l~v~~~--~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~------~~~~~i~~~~~~g~ 239 (286)
T 1q7f_A 169 VVVNDKQEIFISDN--RAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADN------HNNFNLTIFTQDGQ 239 (286)
T ss_dssp EEECSSSEEEEEEG--GGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEEC------SSSCEEEEECTTSC
T ss_pred EEECCCCCEEEEEC--CCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECCCCCEEEEeC------CCCEEEEEECCCCC
Confidence 47899999777765 478999999754 4444432 14689999999999888877 465 8999999998
Q ss_pred EEEecc----CCcEEEEEEeeCCCeeeecCchhhH
Q psy5876 76 IIKRFN----SPTFCQLRWRPRPASLLSKEQVDKI 106 (143)
Q Consensus 76 ~l~~~~----~~~v~~l~wsP~~~~l~s~s~d~~i 106 (143)
.+.... .....++++.|+|+.+++. .+..|
T Consensus 240 ~~~~~~~~~~~~~~~~i~~~~~g~l~vs~-~~~~v 273 (286)
T 1q7f_A 240 LISALESKVKHAQCFDVALMDDGSVVLAS-KDYRL 273 (286)
T ss_dssp EEEEEEESSCCSCEEEEEEETTTEEEEEE-TTTEE
T ss_pred EEEEEcccCCCCcceeEEECCCCcEEEEC-CCCeE
Confidence 776543 2347899999999988884 45544
No 174
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.84 E-value=1e-08 Score=88.08 Aligned_cols=101 Identities=7% Similarity=0.016 Sum_probs=68.5
Q ss_pred CeEecCCCEEEEEecCCC----CeEEEEECCCceEEeee-ccCceEEEEECCCCCEEEEeecCcce--------ecCCcE
Q psy5876 1 MKLRMRGTHIVLAELRDT----GSLEFVDTGDFSVMNAA-EHHQATDVEWDPTGRYVMSGVSLWKT--------KADTGY 67 (143)
Q Consensus 1 i~~SPdG~~las~~~~~d----g~i~iWd~~~~~~~~~~-~~~~v~~i~wsPdG~~lat~s~~~~~--------~~D~~i 67 (143)
++|||||++||.+.. .. .+|++||+.+++.+... +...+..++|||| +.|+.++..... .....+
T Consensus 168 ~~~SPDG~~la~~~~-~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v 245 (741)
T 1yr2_A 168 WAASDDGRLLAYSVQ-DGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTV 245 (741)
T ss_dssp EEECTTSSEEEEEEE-ETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEE
T ss_pred EEECCCCCEEEEEEc-CCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEE
Confidence 379999999998763 12 36999999998875432 1122368999999 999888742110 002248
Q ss_pred EEEeec-Cc----EEEeccC--CcEEEEEEeeCCCeeeecCch
Q psy5876 68 WQWSFQ-GK----IIKRFNS--PTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 68 ~iW~~~-g~----~l~~~~~--~~v~~l~wsP~~~~l~s~s~d 103 (143)
++|++. +. ++..... ..+..+.|+|||+.|+..+.+
T Consensus 246 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 288 (741)
T 1yr2_A 246 WLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSE 288 (741)
T ss_dssp EEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred EEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEc
Confidence 889883 32 4444332 358899999999998876644
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.84 E-value=9.2e-09 Score=81.52 Aligned_cols=89 Identities=9% Similarity=0.101 Sum_probs=62.2
Q ss_pred CeEecCCCEEEEEec-------C-CCCeEEEEECCCceEEeeec--------cCceEEEEECCCCCEEEEeecCcceecC
Q psy5876 1 MKLRMRGTHIVLAEL-------R-DTGSLEFVDTGDFSVMNAAE--------HHQATDVEWDPTGRYVMSGVSLWKTKAD 64 (143)
Q Consensus 1 i~~SPdG~~las~~~-------~-~dg~i~iWd~~~~~~~~~~~--------~~~v~~i~wsPdG~~lat~s~~~~~~~D 64 (143)
++|||||++|.+++. + .+++|.+||+.+++.+.+.. ......+++||||++|+++... .+
T Consensus 55 i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~----~~ 130 (361)
T 2oiz_A 55 VQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS----PA 130 (361)
T ss_dssp EEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES----SS
T ss_pred eEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC----CC
Confidence 579999999999862 0 25679999999888766542 1246689999999999988731 25
Q ss_pred CcEEEEeec-CcEEEe-ccCCcEEEEEEeeC
Q psy5876 65 TGYWQWSFQ-GKIIKR-FNSPTFCQLRWRPR 93 (143)
Q Consensus 65 ~~i~iW~~~-g~~l~~-~~~~~v~~l~wsP~ 93 (143)
+.|.+||.. ++.+.. ........+.+.|+
T Consensus 131 ~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~ 161 (361)
T 2oiz_A 131 TSIGIVDVAKGDYVEDVTAAAGCWSVIPQPN 161 (361)
T ss_dssp EEEEEEETTTTEEEEEEGGGTTEEEEEECTT
T ss_pred CeEEEEECCCCcEEEEEecCCCcceeEEcCC
Confidence 789999995 666666 54333333333443
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.83 E-value=3.4e-08 Score=76.87 Aligned_cols=100 Identities=9% Similarity=-0.061 Sum_probs=68.3
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEe--eeccCceEEEE--ECCCCCEEEEeecCc----------------c
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMN--AAEHHQATDVE--WDPTGRYVMSGVSLW----------------K 60 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~--~~~~~~v~~i~--wsPdG~~lat~s~~~----------------~ 60 (143)
++|||||++|+.++ .++.|.+||+.+++... ..+...+.... ++|||++++...... .
T Consensus 86 ~~~spdg~~l~~~~--~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 163 (388)
T 3pe7_A 86 GFLSPDDDALFYVK--DGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYF 163 (388)
T ss_dssp CEECTTSSEEEEEE--TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGG
T ss_pred eEEcCCCCEEEEEe--CCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhc
Confidence 37999999999998 47899999999876543 33333344444 499999998543110 0
Q ss_pred eecCCcEEEEeecCcEEEec--cCCcEEEEEEee-CCCeeeecCc
Q psy5876 61 TKADTGYWQWSFQGKIIKRF--NSPTFCQLRWRP-RPASLLSKEQ 102 (143)
Q Consensus 61 ~~~D~~i~iW~~~g~~l~~~--~~~~v~~l~wsP-~~~~l~s~s~ 102 (143)
...+..+.+||+.+..+... ....+..++|+| ||+.|+..+.
T Consensus 164 ~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~ 208 (388)
T 3pe7_A 164 TKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHE 208 (388)
T ss_dssp GCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEEC
T ss_pred cCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEe
Confidence 11346788999864333322 355789999999 9999886654
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.76 E-value=3.3e-08 Score=76.73 Aligned_cols=69 Identities=6% Similarity=-0.029 Sum_probs=50.0
Q ss_pred CeEecCCCEEEEEecC-CCCeEEEEECCCceEEeeecc-Cce-EEEEECCCCCEEEEeecCcceecCCcEEEEeecCc
Q psy5876 1 MKLRMRGTHIVLAELR-DTGSLEFVDTGDFSVMNAAEH-HQA-TDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGK 75 (143)
Q Consensus 1 i~~SPdG~~las~~~~-~dg~i~iWd~~~~~~~~~~~~-~~v-~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~ 75 (143)
++|||||++|+.+... .+..|.+||+.+++......+ ... ..+.|||||++|+.++ .++.+++|++.+.
T Consensus 41 ~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~------~~~~l~~~d~~~~ 112 (396)
T 3c5m_A 41 KCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVK------NELNLMKVDLETL 112 (396)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEE------TTTEEEEEETTTC
T ss_pred CcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEE------cCCcEEEEECCCC
Confidence 4699999999887531 124788899988775443322 232 3378999999999998 4668999999643
No 178
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.76 E-value=1e-07 Score=73.04 Aligned_cols=94 Identities=9% Similarity=0.165 Sum_probs=70.8
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeee--ccCceEEEEECCCCCEEEEeecCcceecC----CcEEEEeecC
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKAD----TGYWQWSFQG 74 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D----~~i~iW~~~g 74 (143)
++|+|+|+.++++. .++.|.+||.++++..... ....+.+++|+|||+++++.. .+ +++.+||.++
T Consensus 50 ~~~~~~g~l~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~------~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 50 LNFDRQGQLFLLDV--FEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYL------GDFKSTGGIFAATENG 121 (333)
T ss_dssp EEECTTSCEEEEET--TTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEEC------TTSSSCCEEEEECTTS
T ss_pred cEECCCCCEEEEEC--CCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeC------CCCCCCceEEEEeCCC
Confidence 47899999777776 4789999999877654322 235799999999999888776 24 6899999976
Q ss_pred cEEE-ec----cCCcEEEEEEeeCCCeeeecCc
Q psy5876 75 KIIK-RF----NSPTFCQLRWRPRPASLLSKEQ 102 (143)
Q Consensus 75 ~~l~-~~----~~~~v~~l~wsP~~~~l~s~s~ 102 (143)
..+. .. ....+.++++.|+|..+++...
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 154 (333)
T 2dg1_A 122 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFR 154 (333)
T ss_dssp CSCEEEECSSSSCCCEEEEEECTTSCEEEEECC
T ss_pred CEEEEEEccCccCCcccceEECCCCCEEEEecc
Confidence 5432 11 2357999999999998887653
No 179
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.75 E-value=6.2e-08 Score=75.22 Aligned_cols=99 Identities=12% Similarity=0.186 Sum_probs=76.3
Q ss_pred CeEecCCCEEEEEecCCC------------------------CeEEEEECCCceEEeeec---cCceEEEEECCCCCEEE
Q psy5876 1 MKLRMRGTHIVLAELRDT------------------------GSLEFVDTGDFSVMNAAE---HHQATDVEWDPTGRYVM 53 (143)
Q Consensus 1 i~~SPdG~~las~~~~~d------------------------g~i~iWd~~~~~~~~~~~---~~~v~~i~wsPdG~~la 53 (143)
|+++|+|+++++.. .+ ++|.+||..+++.+.... ......++++|+|+.++
T Consensus 29 va~d~~G~l~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v 106 (329)
T 3fvz_A 29 VALDSKNNLVIFHR--GDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWV 106 (329)
T ss_dssp EEECTTCCEEEEEC--TTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEE
T ss_pred EEECCCCCEEEEeC--CCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEE
Confidence 57899999998876 24 479999999888776553 23689999999999888
Q ss_pred EeecCcceecCCcEEEEeecCc--EEEecc-----------CCcEEEEEEee-CCCeeeecC-chhhHH
Q psy5876 54 SGVSLWKTKADTGYWQWSFQGK--IIKRFN-----------SPTFCQLRWRP-RPASLLSKE-QVDKIK 107 (143)
Q Consensus 54 t~s~~~~~~~D~~i~iW~~~g~--~l~~~~-----------~~~v~~l~wsP-~~~~l~s~s-~d~~i~ 107 (143)
+.+ .++.|++|+.+|+ .+.... ......+++.| ++..+++.+ .+..|+
T Consensus 107 ~d~------~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~ 169 (329)
T 3fvz_A 107 TDV------ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIV 169 (329)
T ss_dssp EET------TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEE
T ss_pred EEC------CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEE
Confidence 777 5789999999887 444321 23588999999 899999986 455554
No 180
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.75 E-value=1.1e-07 Score=71.52 Aligned_cols=97 Identities=9% Similarity=0.143 Sum_probs=74.4
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec----cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE----HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKI 76 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~----~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~ 76 (143)
|+++|+|+.+++.. .++.|.+||.+. +.+..+. ...+..++++|+|+.+++.+ .++.|++|+.+|+.
T Consensus 126 i~~~~~g~l~v~~~--~~~~i~~~~~~g-~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~------~~~~i~~~~~~g~~ 196 (286)
T 1q7f_A 126 VTVDNKGRIIVVEC--KVMRVIIFDQNG-NVLHKFGCSKHLEFPNGVVVNDKQEIFISDN------RAHCVKVFNYEGQY 196 (286)
T ss_dssp EEECTTSCEEEEET--TTTEEEEECTTS-CEEEEEECTTTCSSEEEEEECSSSEEEEEEG------GGTEEEEEETTCCE
T ss_pred EEEeCCCCEEEEEC--CCCEEEEEcCCC-CEEEEeCCCCccCCcEEEEECCCCCEEEEEC------CCCEEEEEcCCCCE
Confidence 46899999777765 478999999653 4444331 23589999999999887776 57899999999987
Q ss_pred EEecc----CCcEEEEEEeeCCCeeeecCchh-hH
Q psy5876 77 IKRFN----SPTFCQLRWRPRPASLLSKEQVD-KI 106 (143)
Q Consensus 77 l~~~~----~~~v~~l~wsP~~~~l~s~s~d~-~i 106 (143)
+.... ......+++.|+|..+++...+. .|
T Consensus 197 ~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i 231 (286)
T 1q7f_A 197 LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNL 231 (286)
T ss_dssp EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEE
T ss_pred EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEE
Confidence 76653 25688999999999998887654 44
No 181
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.73 E-value=1.1e-07 Score=72.15 Aligned_cols=93 Identities=6% Similarity=-0.114 Sum_probs=68.5
Q ss_pred CeEecCCC-EEEEEecCCCCeEEEEECCCceEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEEE
Q psy5876 1 MKLRMRGT-HIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIK 78 (143)
Q Consensus 1 i~~SPdG~-~las~~~~~dg~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l~ 78 (143)
++|+|+|+ .++++. .++.|..||.+++......+...+..++++|||+++++.. .++++.+||. +|+...
T Consensus 33 ~~~d~~g~~l~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~------~~~~i~~~d~~~g~~~~ 104 (296)
T 3e5z_A 33 PVYVPARSAVIFSDV--RQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSH------GLRRLERQREPGGEWES 104 (296)
T ss_dssp EEEEGGGTEEEEEEG--GGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEET------TTTEEEEECSTTCCEEE
T ss_pred CeEeCCCCEEEEEeC--CCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEec------CCCeEEEEcCCCCcEEE
Confidence 47999999 555555 4789999999886222222345689999999999887766 4688999999 677433
Q ss_pred ecc------CCcEEEEEEeeCCCeeeecC
Q psy5876 79 RFN------SPTFCQLRWRPRPASLLSKE 101 (143)
Q Consensus 79 ~~~------~~~v~~l~wsP~~~~l~s~s 101 (143)
... ...++++++.|+|..++|.+
T Consensus 105 ~~~~~~~~~~~~~~~i~~d~~G~l~vtd~ 133 (296)
T 3e5z_A 105 IADSFEGKKLNSPNDVCLAPDGSLWFSDP 133 (296)
T ss_dssp EECEETTEECCCCCCEEECTTSCEEEEEC
T ss_pred EeeccCCCCCCCCCCEEECCCCCEEEECC
Confidence 211 23567899999999999843
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.72 E-value=4.8e-08 Score=75.04 Aligned_cols=93 Identities=13% Similarity=0.130 Sum_probs=62.8
Q ss_pred CCCEEEEEecC-------CCCeEEEEECCCceEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE
Q psy5876 6 RGTHIVLAELR-------DTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 78 (143)
Q Consensus 6 dG~~las~~~~-------~dg~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~ 78 (143)
||++||..... .++.|.+||+.+++.... ..+..++|||||++||..+.... .....+++|++.+....
T Consensus 23 dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l---~~~~~~~~SpDg~~la~~~~~~~-~~~~~l~~~~~~~g~~~ 98 (347)
T 2gop_A 23 KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI---ENATMPRISPDGKKIAFMRANEE-KKVSEIWVADLETLSSK 98 (347)
T ss_dssp ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE---ESCEEEEECTTSSEEEEEEEETT-TTEEEEEEEETTTTEEE
T ss_pred CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc---ccCCCeEECCCCCEEEEEEeccC-CCcceEEEEECCCCceE
Confidence 89988875210 146899999988754322 46788999999999999874100 00123777888654333
Q ss_pred e-cc-CCcEEEEEEeeCCCeeeecCch
Q psy5876 79 R-FN-SPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 79 ~-~~-~~~v~~l~wsP~~~~l~s~s~d 103 (143)
. .. .. +..++|+|||+.|+..+.+
T Consensus 99 ~l~~~~~-~~~~~wspdg~~l~~~~~~ 124 (347)
T 2gop_A 99 KILEAKN-IRSLEWNEDSRKLLIVGFK 124 (347)
T ss_dssp EEEEESE-EEEEEECTTSSEEEEEEEC
T ss_pred EEEcCCC-ccceeECCCCCEEEEEEcc
Confidence 2 22 33 9999999999999987643
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.71 E-value=3.5e-08 Score=74.83 Aligned_cols=101 Identities=13% Similarity=0.052 Sum_probs=72.8
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECC-CceE---Eeee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecC
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTG-DFSV---MNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQG 74 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~-~~~~---~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g 74 (143)
++|+|||+.|++.+ .++.|.+||++ +++. ...+ ....+..++++|+|+.+++. +++|.+|+.+|
T Consensus 177 i~~s~dg~~lv~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--------~~~v~~~~~~g 246 (296)
T 3e5z_A 177 LAFLPSGNLLVSDT--GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--------GDGVHVLTPDG 246 (296)
T ss_dssp EEECTTSCEEEEET--TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--------TTEEEEECTTS
T ss_pred EEECCCCCEEEEeC--CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--------CCeEEEECCCC
Confidence 47999999995554 47899999986 4443 1222 22356789999999976654 35899999999
Q ss_pred cEEEecc-CCcEEEEEE-eeCCCeeeecCchhhHHhhhh
Q psy5876 75 KIIKRFN-SPTFCQLRW-RPRPASLLSKEQVDKIKKSLK 111 (143)
Q Consensus 75 ~~l~~~~-~~~v~~l~w-sP~~~~l~s~s~d~~i~~~~~ 111 (143)
+.+.... ...+.+++| .|++..|..++.++..+-+.+
T Consensus 247 ~~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~~l~~~~~~ 285 (296)
T 3e5z_A 247 DELGRVLTPQTTSNLCFGGPEGRTLYMTVSTEFWSIETN 285 (296)
T ss_dssp CEEEEEECSSCCCEEEEESTTSCEEEEEETTEEEEEECS
T ss_pred CEEEEEECCCCceeEEEECCCCCEEEEEcCCeEEEEEcc
Confidence 9877653 223889999 589998888777766654444
No 184
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.69 E-value=1.1e-07 Score=72.98 Aligned_cols=88 Identities=10% Similarity=0.067 Sum_probs=72.1
Q ss_pred cCCCEEEEEecCCCCeEEEEECCCceEEeeecc---CceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEEecc
Q psy5876 5 MRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH---HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRFN 81 (143)
Q Consensus 5 PdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~---~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~~~~ 81 (143)
..|+.|++++ .++.|.+||..+++.+-++.. ..+.+++++|+|++|++ . ++++..||.+|+.+.++.
T Consensus 3 ~~~~~lv~~~--~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs-~-------~~~V~~~d~~G~~~W~~~ 72 (276)
T 3no2_A 3 SPQHLLVGGS--GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS-Y-------SKGAKMITRDGRELWNIA 72 (276)
T ss_dssp CCCEEEEECT--TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE-C-------BSEEEEECTTSCEEEEEE
T ss_pred CCCcEEEeeC--CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe-C-------CCCEEEECCCCCEEEEEc
Confidence 3457888887 589999999999998877643 35889999999999983 2 568999999999887764
Q ss_pred C---CcEEEEEEeeCCCeeeecCc
Q psy5876 82 S---PTFCQLRWRPRPASLLSKEQ 102 (143)
Q Consensus 82 ~---~~v~~l~wsP~~~~l~s~s~ 102 (143)
. ..+.++.+.|+|..+++.+.
T Consensus 73 ~~~~~~~~~~~~~~dG~~lv~~~~ 96 (276)
T 3no2_A 73 APAGCEMQTARILPDGNALVAWCG 96 (276)
T ss_dssp CCTTCEEEEEEECTTSCEEEEEES
T ss_pred CCCCccccccEECCCCCEEEEecC
Confidence 2 47889999999999998765
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.64 E-value=2.4e-07 Score=78.93 Aligned_cols=98 Identities=13% Similarity=0.089 Sum_probs=65.7
Q ss_pred CeEecCCCEEEEEecCCCCe----------------EEEEECCCce----EEeeec-c-CceEEEEECCCCCEEEEeecC
Q psy5876 1 MKLRMRGTHIVLAELRDTGS----------------LEFVDTGDFS----VMNAAE-H-HQATDVEWDPTGRYVMSGVSL 58 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~----------------i~iWd~~~~~----~~~~~~-~-~~v~~i~wsPdG~~lat~s~~ 58 (143)
++|||||+.|+.++. ++. |.+|++.+++ ++.... + ..+..++|||||++|+.++..
T Consensus 176 ~~wspDg~~l~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~ 253 (710)
T 2xdw_A 176 MAWTHDGKGMFYNAY--PQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIRE 253 (710)
T ss_dssp EEECTTSSEEEEEEC--CCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred EEEEeCCCEEEEEEE--CCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEc
Confidence 479999999999874 443 9999998764 343332 2 347899999999999988731
Q ss_pred cceecCCcEEEEeecC-------c-EEEec--cCCcEEEEEEeeCCCeeeecCc
Q psy5876 59 WKTKADTGYWQWSFQG-------K-IIKRF--NSPTFCQLRWRPRPASLLSKEQ 102 (143)
Q Consensus 59 ~~~~~D~~i~iW~~~g-------~-~l~~~--~~~~v~~l~wsP~~~~l~s~s~ 102 (143)
.. ..++.+++||+++ . .+... +...+.. .|+|+|..|+-.+.
T Consensus 254 ~~-~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~ 305 (710)
T 2xdw_A 254 GC-DPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTN 305 (710)
T ss_dssp SS-SSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEEC
T ss_pred cC-CCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEEC
Confidence 10 0156899999963 2 22222 2333443 58999998875544
No 186
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.60 E-value=1e-07 Score=73.99 Aligned_cols=104 Identities=11% Similarity=0.139 Sum_probs=74.4
Q ss_pred CeEecC-CCEEEEEecCCCCeEEEEECCCceEEeeec----cCceEEEEECCCCCEEEEeecCcce-ecCCcEEEEee-c
Q psy5876 1 MKLRMR-GTHIVLAELRDTGSLEFVDTGDFSVMNAAE----HHQATDVEWDPTGRYVMSGVSLWKT-KADTGYWQWSF-Q 73 (143)
Q Consensus 1 i~~SPd-G~~las~~~~~dg~i~iWd~~~~~~~~~~~----~~~v~~i~wsPdG~~lat~s~~~~~-~~D~~i~iW~~-~ 73 (143)
|+++|+ |+.+++.. .++.|++||.++++.+..+. ...+..++|+| |..+++.+..+.. ..++.+++|+. +
T Consensus 201 ia~d~~~g~l~v~d~--~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~ 277 (329)
T 3fvz_A 201 LALVPHLDQLCVADR--ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSS 277 (329)
T ss_dssp EEEETTTTEEEEEET--TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTT
T ss_pred EEEECCCCEEEEEEC--CCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCC
Confidence 578999 55555544 47899999999888777652 24688999999 5555544422111 13568999997 5
Q ss_pred CcEEEecc-----CCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 74 GKIIKRFN-----SPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 74 g~~l~~~~-----~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
|+.+..+. ......++++|+|..+++...+..|+
T Consensus 278 g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~ 316 (329)
T 3fvz_A 278 GEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVW 316 (329)
T ss_dssp CCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEE
T ss_pred CeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEE
Confidence 88877642 45689999999998888888777664
No 187
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.59 E-value=3.6e-07 Score=74.27 Aligned_cols=79 Identities=10% Similarity=0.093 Sum_probs=62.7
Q ss_pred EEEEecCCCCeEEEEECCCceEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEE---Eec------
Q psy5876 10 IVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII---KRF------ 80 (143)
Q Consensus 10 las~~~~~dg~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l---~~~------ 80 (143)
+|+++ .||.|.+||+.++.... . ...|++++|||+| ++.|. .|+.+++|+.++..+ ...
T Consensus 139 ~av~~--~dG~L~v~dl~~~~~~~-~-~~~Vs~v~WSpkG--~~vg~------~dg~i~~~~~~~~~~~~k~~I~~Pp~~ 206 (388)
T 1xip_A 139 LVILN--SVNDLSALDLRTKSTKQ-L-AQNVTSFDVTNSQ--LAVLL------KDRSFQSFAWRNGEMEKQFEFSLPSEL 206 (388)
T ss_dssp EEEEE--TTSEEEEEETTTCCEEE-E-EESEEEEEECSSE--EEEEE------TTSCEEEEEEETTEEEEEEEECCCHHH
T ss_pred EEEEE--CCCCEEEEEccCCcccc-c-cCCceEEEEcCCc--eEEEE------cCCcEEEEcCCCccccccceecCCccc
Confidence 77776 59999999999776543 2 3589999999999 56666 589999999987764 222
Q ss_pred -----cCCcEEEEEEeeCCCeeeec
Q psy5876 81 -----NSPTFCQLRWRPRPASLLSK 100 (143)
Q Consensus 81 -----~~~~v~~l~wsP~~~~l~s~ 100 (143)
+...|.++.|.++++.+++-
T Consensus 207 ~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 207 EELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp HTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred ccccCCCeeEEEEEEecCCeEEEEE
Confidence 24579999999999999973
No 188
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.58 E-value=3.9e-07 Score=69.73 Aligned_cols=94 Identities=11% Similarity=0.068 Sum_probs=67.0
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCC-ceEE--------eeec-cCceEEEEECCCCCEEEEeecCcceecCCcEEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGD-FSVM--------NAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQW 70 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~-~~~~--------~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW 70 (143)
++|+|||++|..+.. .++.|.+||..+ ++.+ ..+. +..+..++++|+|+.+++.. .+++|.+|
T Consensus 187 i~~~~dg~~l~v~~~-~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~------~~~~v~~~ 259 (333)
T 2dg1_A 187 IALSTDEKVLWVTET-TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMY------GQGRVLVF 259 (333)
T ss_dssp EEECTTSSEEEEEEG-GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEE------TTTEEEEE
T ss_pred eEECCCCCEEEEEeC-CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEc------CCCEEEEE
Confidence 478999997766543 368999999853 2211 1111 23578899999999888776 47889999
Q ss_pred eecCcEEEecc--CC------cEEEEEEeeCCCeeeecC
Q psy5876 71 SFQGKIIKRFN--SP------TFCQLRWRPRPASLLSKE 101 (143)
Q Consensus 71 ~~~g~~l~~~~--~~------~v~~l~wsP~~~~l~s~s 101 (143)
|.+|+.+.... .. .+.+++|+|++..|..++
T Consensus 260 d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~ 298 (333)
T 2dg1_A 260 NKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS 298 (333)
T ss_dssp CTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEe
Confidence 99888776543 21 588999999987775433
No 189
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.58 E-value=1.1e-07 Score=81.32 Aligned_cols=97 Identities=6% Similarity=0.050 Sum_probs=64.5
Q ss_pred CeEecCCCEEEEEecC---CCCeEEEEECCCceEEee-eccCceEEEEECCCCCEEEEeecCcc-------eecCCcEEE
Q psy5876 1 MKLRMRGTHIVLAELR---DTGSLEFVDTGDFSVMNA-AEHHQATDVEWDPTGRYVMSGVSLWK-------TKADTGYWQ 69 (143)
Q Consensus 1 i~~SPdG~~las~~~~---~dg~i~iWd~~~~~~~~~-~~~~~v~~i~wsPdG~~lat~s~~~~-------~~~D~~i~i 69 (143)
++|||||++||-+... .+.+|++||+.+++.+.. .+......++|+ ||+.|+.++.... ......|++
T Consensus 134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~ 212 (693)
T 3iuj_A 134 LSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYF 212 (693)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEE
T ss_pred EEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEE
Confidence 3799999999964321 235899999999886543 221123678999 9999998884210 001234888
Q ss_pred Eeec-C----cEEEeccC---CcEEEEEEeeCCCeee
Q psy5876 70 WSFQ-G----KIIKRFNS---PTFCQLRWRPRPASLL 98 (143)
Q Consensus 70 W~~~-g----~~l~~~~~---~~v~~l~wsP~~~~l~ 98 (143)
|++. + .++..... ..+.++.|+|||+.|+
T Consensus 213 ~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~ 249 (693)
T 3iuj_A 213 HRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLL 249 (693)
T ss_dssp EETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEE
T ss_pred EECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEE
Confidence 9883 2 24554322 3578899999999885
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.53 E-value=7.1e-07 Score=75.48 Aligned_cols=88 Identities=8% Similarity=0.092 Sum_probs=68.9
Q ss_pred EEEEEecCCCCeEEEEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCcceecCCcEEEEee---cCcEEEecc-CC
Q psy5876 9 HIVLAELRDTGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF---QGKIIKRFN-SP 83 (143)
Q Consensus 9 ~las~~~~~dg~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~---~g~~l~~~~-~~ 83 (143)
+++++.. .+++|.++|..+++.+.+... ..+..+.+||||+++.+++ .|+.+.+||+ +++.+.+.. ..
T Consensus 168 ~~~V~~~-~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~------~dg~V~viD~~~~t~~~v~~i~~G~ 240 (567)
T 1qks_A 168 LFSVTLR-DAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIG------RDGKVNMIDLWMKEPTTVAEIKIGS 240 (567)
T ss_dssp EEEEEET-TTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEE------TTSEEEEEETTSSSCCEEEEEECCS
T ss_pred eEEEEeC-CCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEc------CCCeEEEEECCCCCCcEeEEEecCC
Confidence 4444443 589999999999988877643 4577999999999999988 5889999999 566776654 34
Q ss_pred cEEEEEEe----eCCCeeeecCch
Q psy5876 84 TFCQLRWR----PRPASLLSKEQV 103 (143)
Q Consensus 84 ~v~~l~ws----P~~~~l~s~s~d 103 (143)
.-..++|+ |||++++.+.+.
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~ 264 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYW 264 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEE
T ss_pred CCceeEEccccCCCCCEEEEEEcc
Confidence 56799999 799988876543
No 191
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.52 E-value=4.8e-07 Score=76.98 Aligned_cols=94 Identities=6% Similarity=-0.036 Sum_probs=59.8
Q ss_pred CeEecCCCEEEEEecCCCCe-------------EEEEECCCce----EEeeec-c-CceEEEEECCCCCEEEEeecCcce
Q psy5876 1 MKLRMRGTHIVLAELRDTGS-------------LEFVDTGDFS----VMNAAE-H-HQATDVEWDPTGRYVMSGVSLWKT 61 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~-------------i~iWd~~~~~----~~~~~~-~-~~v~~i~wsPdG~~lat~s~~~~~ 61 (143)
++|||||+.|+.++. |.. |.+|++.+++ ++.... + ..+..++|||||++|+.++....
T Consensus 173 ~~wspDg~~l~~~~~--d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~- 249 (695)
T 2bkl_A 173 PKWTPDSKGFYYEWL--PTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW- 249 (695)
T ss_dssp CEECTTSSEEEEEEC--CCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-
T ss_pred eEEecCCCEEEEEEe--cCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-
Confidence 589999999999884 444 9999998754 444432 2 36889999999999988873100
Q ss_pred ecCCcEEEEeec-CcEEE-eccCCcEEEEEEeeCCCeeee
Q psy5876 62 KADTGYWQWSFQ-GKIIK-RFNSPTFCQLRWRPRPASLLS 99 (143)
Q Consensus 62 ~~D~~i~iW~~~-g~~l~-~~~~~~v~~l~wsP~~~~l~s 99 (143)
..+.+++|+.. |.... ..+...+....| |+|..++.
T Consensus 250 -~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~ 287 (695)
T 2bkl_A 250 -SENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVL 287 (695)
T ss_dssp -TEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEE
T ss_pred -CceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEE
Confidence 01256667663 33222 123344555566 66764343
No 192
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.51 E-value=9.6e-07 Score=65.35 Aligned_cols=99 Identities=7% Similarity=0.005 Sum_probs=74.2
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEee-ecc-CceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNA-AEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 78 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~-~~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~ 78 (143)
|+++|+|+.+++.. .++.|.+||.++...... ... ..+..++++|+|+.+++.. .++.|.+|+.+|....
T Consensus 155 i~~~~~g~l~v~~~--~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~------~~~~v~~~~~~~~~~~ 226 (270)
T 1rwi_B 155 VAVDNSGNVYVTDT--DNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEH------NTNQVVKLLAGSTTST 226 (270)
T ss_dssp EEECTTCCEEEEEG--GGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEET------TTSCEEEECTTCSCCE
T ss_pred EEEeCCCCEEEEEC--CCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEEC------CCCcEEEEcCCCCcce
Confidence 46889999776654 368999999887654432 222 5689999999998777666 4778999999876543
Q ss_pred ecc---CCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 79 RFN---SPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~~---~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
... ......+++.|+|..+++...++.|+
T Consensus 227 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~ 258 (270)
T 1rwi_B 227 VLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV 258 (270)
T ss_dssp ECCCCSCSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred eeccCCCCCceeEEECCCCCEEEEECCCCEEE
Confidence 332 35689999999999888887777664
No 193
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.50 E-value=3.1e-07 Score=74.63 Aligned_cols=90 Identities=6% Similarity=0.019 Sum_probs=66.2
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l 77 (143)
|+| ||++|+++. +|.|++||+.+....... ....+.++.+.+.. +|+++ .|+.+.+||+. ++..
T Consensus 93 l~f--d~~~L~v~~---~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~------~dG~L~v~dl~~~~~~ 159 (388)
T 1xip_A 93 VCF--HGDQVLVST---RNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILN------SVNDLSALDLRTKSTK 159 (388)
T ss_dssp EEE--ETTEEEEEE---SSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEE------TTSEEEEEETTTCCEE
T ss_pred EEE--CCCEEEEEc---CCcEEEEEchhhhccCccceeecceeeEEecCCC--EEEEE------CCCCEEEEEccCCccc
Confidence 467 999999994 799999998865432222 12467788777653 77777 59999999996 5554
Q ss_pred EeccCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 78 KRFNSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 78 ~~~~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
. ....|.+++|+|+| ++.+..|++++
T Consensus 160 ~--~~~~Vs~v~WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 160 Q--LAQNVTSFDVTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp E--EEESEEEEEECSSE--EEEEETTSCEE
T ss_pred c--ccCCceEEEEcCCc--eEEEEcCCcEE
Confidence 3 34589999999999 56677777664
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.49 E-value=2e-06 Score=72.68 Aligned_cols=98 Identities=12% Similarity=0.147 Sum_probs=72.7
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECC--CceEEeeec-cCceEEEEEC----CCCCEEEEeecCcceecCCcEEEEee-
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTG--DFSVMNAAE-HHQATDVEWD----PTGRYVMSGVSLWKTKADTGYWQWSF- 72 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~--~~~~~~~~~-~~~v~~i~ws----PdG~~lat~s~~~~~~~D~~i~iW~~- 72 (143)
+.|||||++|.+++ .+|.|.+||+. +++.+.+.. ......++|| |||++++++.. .++.+.|+|.
T Consensus 202 v~~SpDGr~lyv~~--~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~-----~~~~v~ViD~~ 274 (567)
T 1qks_A 202 SRLSASGRYLFVIG--RDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAY-----WPPQYVIMDGE 274 (567)
T ss_dssp EEECTTSCEEEEEE--TTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE-----ETTEEEEEETT
T ss_pred eEECCCCCEEEEEc--CCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEc-----cCCeEEEEECC
Confidence 47899999999988 58999999995 777776654 3457899999 79999998885 5789999998
Q ss_pred cCcEEEecc-------------CCcEEEEEEeeCCCeee-ecCchhh
Q psy5876 73 QGKIIKRFN-------------SPTFCQLRWRPRPASLL-SKEQVDK 105 (143)
Q Consensus 73 ~g~~l~~~~-------------~~~v~~l~wsP~~~~l~-s~s~d~~ 105 (143)
+.+.+.... ...+..+..+|+++.++ +..+.++
T Consensus 275 t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 275 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 466665432 12577888888865433 4333333
No 195
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.45 E-value=5.6e-06 Score=64.25 Aligned_cols=92 Identities=14% Similarity=0.116 Sum_probs=67.9
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECC--Cc-e-----EEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTG--DF-S-----VMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQW 70 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~--~~-~-----~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW 70 (143)
++|+|||+.|..+.. .++.|.+||.+ ++ + .+..+. ......++++++|++.++.. .+++|.+|
T Consensus 184 i~~s~dg~~lyv~~~-~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~------~~~~v~~~ 256 (326)
T 2ghs_A 184 ICFSPDGTTGYFVDT-KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARW------GEGAVDRY 256 (326)
T ss_dssp EEECTTSCEEEEEET-TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEE------TTTEEEEE
T ss_pred eEEcCCCCEEEEEEC-CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEe------CCCEEEEE
Confidence 479999998876653 36899999975 55 2 232322 23568899999999877765 36789999
Q ss_pred eecCcEEEecc--CCcEEEEEEe-eCCCeeee
Q psy5876 71 SFQGKIIKRFN--SPTFCQLRWR-PRPASLLS 99 (143)
Q Consensus 71 ~~~g~~l~~~~--~~~v~~l~ws-P~~~~l~s 99 (143)
+.+|+.+.... ...+.+++|. |++..|..
T Consensus 257 d~~g~~~~~i~~~~~~~~~~af~g~d~~~L~v 288 (326)
T 2ghs_A 257 DTDGNHIARYEVPGKQTTCPAFIGPDASRLLV 288 (326)
T ss_dssp CTTCCEEEEEECSCSBEEEEEEESTTSCEEEE
T ss_pred CCCCCEEEEEECCCCCcEEEEEecCCCCEEEE
Confidence 99888776543 4579999998 99887643
No 196
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.41 E-value=4.2e-06 Score=66.86 Aligned_cols=76 Identities=16% Similarity=0.022 Sum_probs=55.8
Q ss_pred CeEecCCCEEEEEecC--------CCCeEEEEECCCceEEeeecc---------CceEEEEECCCCCEEEEeecCcceec
Q psy5876 1 MKLRMRGTHIVLAELR--------DTGSLEFVDTGDFSVMNAAEH---------HQATDVEWDPTGRYVMSGVSLWKTKA 63 (143)
Q Consensus 1 i~~SPdG~~las~~~~--------~dg~i~iWd~~~~~~~~~~~~---------~~v~~i~wsPdG~~lat~s~~~~~~~ 63 (143)
+++||||++|.+++.. .++.|.++|..+++.+.+.+. .....++|||||++|+.+... .
T Consensus 71 i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~----~ 146 (373)
T 2mad_H 71 PVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA----A 146 (373)
T ss_pred eEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC----C
Confidence 5799999999998520 257899999998877665421 235689999999999988731 2
Q ss_pred CCcEEEEeec-CcEEEe-cc
Q psy5876 64 DTGYWQWSFQ-GKIIKR-FN 81 (143)
Q Consensus 64 D~~i~iW~~~-g~~l~~-~~ 81 (143)
++.|.++| . ++.+.. ..
T Consensus 147 ~~~v~viD-~t~~~~~~~i~ 165 (373)
T 2mad_H 147 GPAVGLVV-QGGSSDDQLLS 165 (373)
T ss_pred CCeEEEEE-CCCCEEeEEcC
Confidence 57899999 7 556655 44
No 197
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.40 E-value=5e-06 Score=63.45 Aligned_cols=93 Identities=8% Similarity=0.028 Sum_probs=68.6
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEEC--CCceE-----Eeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEe
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDT--GDFSV-----MNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWS 71 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~--~~~~~-----~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~ 71 (143)
++|||||+.|..+.. .++.|..||. .+++. +..+. ......++++|+|++.++.. ..+.|.+||
T Consensus 154 i~~spdg~~lyv~~~-~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~------~~~~v~~~d 226 (297)
T 3g4e_A 154 LDWSLDHKIFYYIDS-LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACY------NGGRVIRLD 226 (297)
T ss_dssp EEECTTSCEEEEEEG-GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEE------TTTEEEEEC
T ss_pred eEEcCCCCEEEEecC-CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEc------CCCEEEEEc
Confidence 579999998866554 3688999986 34432 22222 23578999999999877776 467799999
Q ss_pred ec-CcEEEecc--CCcEEEEEEe-eCCCeeeec
Q psy5876 72 FQ-GKIIKRFN--SPTFCQLRWR-PRPASLLSK 100 (143)
Q Consensus 72 ~~-g~~l~~~~--~~~v~~l~ws-P~~~~l~s~ 100 (143)
.+ |+++.... ...+.+++|. |++..|.-.
T Consensus 227 ~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 227 PVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp TTTCCEEEEEECSSSBEEEEEEESGGGCEEEEE
T ss_pred CCCceEEEEEECCCCCceEEEEeCCCCCEEEEE
Confidence 96 98887654 4689999998 998876533
No 198
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.39 E-value=4.7e-06 Score=63.71 Aligned_cols=91 Identities=9% Similarity=-0.103 Sum_probs=65.2
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEEec-
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF- 80 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~~~- 80 (143)
.|+|+|+.|+..+. .++.|..|+.+............+..++|+|||+.+++.. .+++|.+|+.+|+.....
T Consensus 51 ~~~~~g~~l~~~d~-~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~------~~~~v~~~~~~g~~~~~~~ 123 (305)
T 3dr2_A 51 AWWEAQRTLVWSDL-VGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEH------GRRAITRSDADGQAHLLVG 123 (305)
T ss_dssp EEEGGGTEEEEEET-TTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEET------TTTEEEEECTTSCEEEEEC
T ss_pred eEeCCCCEEEEEEC-CCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEEC------CCCEEEEECCCCCEEEEEe
Confidence 69999996655554 4789999998432222233345689999999999776655 467899999887643221
Q ss_pred --c---CCcEEEEEEeeCCCeeee
Q psy5876 81 --N---SPTFCQLRWRPRPASLLS 99 (143)
Q Consensus 81 --~---~~~v~~l~wsP~~~~l~s 99 (143)
. .+.++++++.|+|...+|
T Consensus 124 ~~~~~~~~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 124 RYAGKRLNSPNDLIVARDGAIWFT 147 (305)
T ss_dssp EETTEECSCCCCEEECTTSCEEEE
T ss_pred ccCCCccCCCCCEEECCCCCEEEe
Confidence 1 245778999999999997
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.38 E-value=1.2e-06 Score=67.09 Aligned_cols=96 Identities=8% Similarity=0.125 Sum_probs=71.2
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeecc---CceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH---HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 78 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~---~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~ 78 (143)
.++|||++|++ . ++.|..||. +++.+-++.. ..+.++.+.|||+++++.+. .++.+..++.+|+.+.
T Consensus 43 ~~~pdG~ilvs-~---~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~-----~~~~v~~vd~~Gk~l~ 112 (276)
T 3no2_A 43 AATKAGEILFS-Y---SKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCG-----HPSTILEVNMKGEVLS 112 (276)
T ss_dssp EECTTSCEEEE-C---BSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEES-----TTEEEEEECTTSCEEE
T ss_pred EECCCCCEEEe-C---CCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecC-----CCCEEEEEeCCCCEEE
Confidence 67899999994 2 578999999 7887776642 36889999999999999882 1456667787888776
Q ss_pred ecc--------CCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 79 RFN--------SPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 79 ~~~--------~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
+.. ......++..|+|..+++...++.|.
T Consensus 113 ~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~ 149 (276)
T 3no2_A 113 KTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVR 149 (276)
T ss_dssp EEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEE
T ss_pred EEeccCCCCcccccccCceECCCCCEEEEecCCCEEE
Confidence 542 11344567889999999887766553
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.36 E-value=3.5e-06 Score=63.48 Aligned_cols=97 Identities=14% Similarity=0.205 Sum_probs=68.8
Q ss_pred CeEe----cCCCEEEEEecCCCCeEEEEECC-Cce-----EEeeec-c--CceEEEEECCCCCEEEEeecCcceecCCcE
Q psy5876 1 MKLR----MRGTHIVLAELRDTGSLEFVDTG-DFS-----VMNAAE-H--HQATDVEWDPTGRYVMSGVSLWKTKADTGY 67 (143)
Q Consensus 1 i~~S----PdG~~las~~~~~dg~i~iWd~~-~~~-----~~~~~~-~--~~v~~i~wsPdG~~lat~s~~~~~~~D~~i 67 (143)
++|+ |||+.|..+.. .++.|.+||.+ +++ ....+. + ..+..++++|+|+.+++.. .+++|
T Consensus 177 i~~~~~~d~dg~~l~v~~~-~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~------~~~~i 249 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAET-PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW------GSSHI 249 (314)
T ss_dssp EEEEECTTSCEEEEEEEET-TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE------TTTEE
T ss_pred EEEecccCCCCCEEEEEEC-CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc------CCCEE
Confidence 4688 99987766643 36899999975 443 222222 1 4578899999999888876 47899
Q ss_pred EEEeec-CcEEEec--cCCcEEEEEEeeCCCee-eecCchh
Q psy5876 68 WQWSFQ-GKIIKRF--NSPTFCQLRWRPRPASL-LSKEQVD 104 (143)
Q Consensus 68 ~iW~~~-g~~l~~~--~~~~v~~l~wsP~~~~l-~s~s~d~ 104 (143)
.+|+.+ |+.+... +...+.+++|+|+|..| ++...++
T Consensus 250 ~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~ 290 (314)
T 1pjx_A 250 EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENN 290 (314)
T ss_dssp EEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTT
T ss_pred EEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCC
Confidence 999997 7765443 34679999999999944 4544433
No 201
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.33 E-value=1.4e-06 Score=70.83 Aligned_cols=102 Identities=10% Similarity=-0.026 Sum_probs=69.3
Q ss_pred CeEecCCCEEEEEec-------C-CCCeEEEEECCCceEEeeecc---------CceEEEEECCCCCEEEEeecCcceec
Q psy5876 1 MKLRMRGTHIVLAEL-------R-DTGSLEFVDTGDFSVMNAAEH---------HQATDVEWDPTGRYVMSGVSLWKTKA 63 (143)
Q Consensus 1 i~~SPdG~~las~~~-------~-~dg~i~iWd~~~~~~~~~~~~---------~~v~~i~wsPdG~~lat~s~~~~~~~ 63 (143)
+++||||++|.+++. + .++.|.+||+.+++.+.+.+- .....+++||||+++..+... .
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~----~ 158 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS----P 158 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS----S
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC----C
Confidence 478999998877651 0 246899999999887766431 135679999999998877621 2
Q ss_pred CCcEEEEeec-CcEEEeccCCc---EE------EEEEeeCCCeeeecCch-hhH
Q psy5876 64 DTGYWQWSFQ-GKIIKRFNSPT---FC------QLRWRPRPASLLSKEQV-DKI 106 (143)
Q Consensus 64 D~~i~iW~~~-g~~l~~~~~~~---v~------~l~wsP~~~~l~s~s~d-~~i 106 (143)
++.+.++|.. ++.+.+..... ++ -++.+|||+.+.-.... +.+
T Consensus 159 ~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 159 APAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp SCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred CCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 6789999995 66666654221 11 13678888877655443 444
No 202
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.30 E-value=1.9e-06 Score=74.65 Aligned_cols=98 Identities=8% Similarity=0.052 Sum_probs=61.9
Q ss_pred eEe-cCCCEEEEEecC---CCCeEEEEECCCc-eEEee-eccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCc
Q psy5876 2 KLR-MRGTHIVLAELR---DTGSLEFVDTGDF-SVMNA-AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGK 75 (143)
Q Consensus 2 ~~S-PdG~~las~~~~---~dg~i~iWd~~~~-~~~~~-~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~ 75 (143)
+|| |||++||-+... ...+|+++|+.++ +.+.. .+ ....+++|||||+.|+..+..... ....|+.+++.+.
T Consensus 180 ~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~-~~~~~~~WspDg~~l~y~~~d~~~-~~~~v~~~~lgt~ 257 (751)
T 2xe4_A 180 KPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS-GTNGEIVWGPDHTSLFYVTKDETL-RENKVWRHVMGKL 257 (751)
T ss_dssp EECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE-EECSCCEECSSTTEEEEEEECTTC-CEEEEEEEETTSC
T ss_pred EecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc-CceeeEEEecCCCEEEEEEECCCC-CCCEEEEEECCCC
Confidence 689 999999976431 1135999999988 63321 11 123578999999988877631000 0024666777432
Q ss_pred -----EEEecc-CCcEEEEEEeeCCCeeeecC
Q psy5876 76 -----IIKRFN-SPTFCQLRWRPRPASLLSKE 101 (143)
Q Consensus 76 -----~l~~~~-~~~v~~l~wsP~~~~l~s~s 101 (143)
++.... ......+.|+|||+.|+-.+
T Consensus 258 ~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~ 289 (751)
T 2xe4_A 258 QSEDVCLYEEHNPLFSAFMYKAADTNTLCIGS 289 (751)
T ss_dssp GGGCEEEEECCCTTCEEEEEECTTSSEEEEEE
T ss_pred chhcEEEEecCCCceEEEEEECCCCCEEEEEe
Confidence 344322 34567889999999888543
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.30 E-value=6.6e-06 Score=70.53 Aligned_cols=100 Identities=7% Similarity=-0.017 Sum_probs=64.1
Q ss_pred CeEecCCCEEEEEecCC------------CCeEEEEECCCce----EEeeecc--CceEEEEECCCCCEEEEeecCccee
Q psy5876 1 MKLRMRGTHIVLAELRD------------TGSLEFVDTGDFS----VMNAAEH--HQATDVEWDPTGRYVMSGVSLWKTK 62 (143)
Q Consensus 1 i~~SPdG~~las~~~~~------------dg~i~iWd~~~~~----~~~~~~~--~~v~~i~wsPdG~~lat~s~~~~~~ 62 (143)
++|||| +.|+.++... ...|.+|++.++. ++..... ..+.++.|||||++|+..+.... .
T Consensus 214 ~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~ 291 (741)
T 1yr2_A 214 LAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT-D 291 (741)
T ss_dssp CEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT-C
T ss_pred EEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC-C
Confidence 579999 9999887421 1248999987653 4433322 24889999999999998873210 0
Q ss_pred cCCcEEEEeecCc--E-EEec--cCCcEEEEEEeeCCCeeeecCch
Q psy5876 63 ADTGYWQWSFQGK--I-IKRF--NSPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 63 ~D~~i~iW~~~g~--~-l~~~--~~~~v~~l~wsP~~~~l~s~s~d 103 (143)
..+.+++||+++. . .... +...+... +.|+|..|+..+.+
T Consensus 292 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~ 336 (741)
T 1yr2_A 292 PVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGD 336 (741)
T ss_dssp SCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECT
T ss_pred CcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECC
Confidence 2458999999643 2 3322 23333443 35999988876654
No 204
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.28 E-value=4.1e-06 Score=61.90 Aligned_cols=97 Identities=10% Similarity=0.016 Sum_probs=66.1
Q ss_pred CeEecCCCEEE-EEecCCCCeEEEEECCCceEEee-e-ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEE
Q psy5876 1 MKLRMRGTHIV-LAELRDTGSLEFVDTGDFSVMNA-A-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII 77 (143)
Q Consensus 1 i~~SPdG~~la-s~~~~~dg~i~iWd~~~~~~~~~-~-~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l 77 (143)
|+++|+|+.++ +.+ .++.|..||..+...... . ....+..++++|+|+.+++.. ++.+.+|+.+|..+
T Consensus 29 i~~~~~g~l~v~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-------~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 29 VAVDSAGNVYVTSEG--MYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-------NNRVVTLAAGSNNQ 99 (270)
T ss_dssp EEECTTCCEEEEECS--SSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-------TTEEEEECTTCSCC
T ss_pred eEECCCCCEEEEccC--CCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-------CCEEEEEeCCCceE
Confidence 46889999777 434 478999999876543221 1 224678899999999666543 56899999987755
Q ss_pred Eecc---CCcEEEEEEeeCCCeeeecCchhhH
Q psy5876 78 KRFN---SPTFCQLRWRPRPASLLSKEQVDKI 106 (143)
Q Consensus 78 ~~~~---~~~v~~l~wsP~~~~l~s~s~d~~i 106 (143)
.... ......+++.|+|..+++...+..|
T Consensus 100 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i 131 (270)
T 1rwi_B 100 TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRV 131 (270)
T ss_dssp EECCCCSCSSEEEEEECTTCCEEEEEGGGTEE
T ss_pred eeeecCCcCCCcceEECCCCCEEEEECCCCEE
Confidence 4332 3578999999999988876554443
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.26 E-value=5.9e-06 Score=62.20 Aligned_cols=94 Identities=6% Similarity=0.010 Sum_probs=67.2
Q ss_pred CeEecCCCEEEE-------EecCCCCeEEEEECCCceEEeee------ccCceEEEEECCC-CCEEEEeecCcceecCCc
Q psy5876 1 MKLRMRGTHIVL-------AELRDTGSLEFVDTGDFSVMNAA------EHHQATDVEWDPT-GRYVMSGVSLWKTKADTG 66 (143)
Q Consensus 1 i~~SPdG~~las-------~~~~~dg~i~iWd~~~~~~~~~~------~~~~v~~i~wsPd-G~~lat~s~~~~~~~D~~ 66 (143)
++|+|+|+.+++ +. .++.|..||..+++..... ....+..++++|+ |+.+++.. .++
T Consensus 23 ~~~~~~g~l~~~~~~~~~~~~--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-------~~~ 93 (314)
T 1pjx_A 23 PVFDKNGDFYIVAPEVEVNGK--PAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-------RLG 93 (314)
T ss_dssp EEECTTSCEEEEETTCEETTE--ECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-------TTE
T ss_pred ceECCCCCEEEEEeccccCCC--CCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-------CCC
Confidence 478999998887 44 3789999998776643221 1246889999999 87666554 447
Q ss_pred EEEEeecCcEEEe-cc------CCcEEEEEEeeCCCeeeecCch
Q psy5876 67 YWQWSFQGKIIKR-FN------SPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 67 i~iW~~~g~~l~~-~~------~~~v~~l~wsP~~~~l~s~s~d 103 (143)
+.+|+.+|+.... .. ...+.++++.|+|...++...+
T Consensus 94 l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 137 (314)
T 1pjx_A 94 LLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAG 137 (314)
T ss_dssp EEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBC
T ss_pred EEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCc
Confidence 8899988665433 21 2357899999999988877543
No 206
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.26 E-value=8.1e-06 Score=63.39 Aligned_cols=90 Identities=12% Similarity=0.206 Sum_probs=66.0
Q ss_pred CeEecCCCEEEEEecCCC----------CeEEEEECCCceEEeeec---cCceEEEEECCCCCEEEEeecCcceecCCcE
Q psy5876 1 MKLRMRGTHIVLAELRDT----------GSLEFVDTGDFSVMNAAE---HHQATDVEWDPTGRYVMSGVSLWKTKADTGY 67 (143)
Q Consensus 1 i~~SPdG~~las~~~~~d----------g~i~iWd~~~~~~~~~~~---~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i 67 (143)
++++|||++++++. .+ +.|.++|..+++...... ......++|+|||++|..+. . .+
T Consensus 177 i~~~~dG~l~v~~~--~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~------~--~v 246 (328)
T 3dsm_A 177 LVMDKYNKMWTITD--GGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN------N--DI 246 (328)
T ss_dssp CEECTTSEEEEEBC--CBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES------S--SE
T ss_pred eEEcCCCCEEEEEC--CCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc------c--EE
Confidence 57899999777764 23 789999999888765543 23689999999999988765 2 78
Q ss_pred EEEeec-CcEEEe--cc--CCcEEEEEEee-CCCeeeec
Q psy5876 68 WQWSFQ-GKIIKR--FN--SPTFCQLRWRP-RPASLLSK 100 (143)
Q Consensus 68 ~iW~~~-g~~l~~--~~--~~~v~~l~wsP-~~~~l~s~ 100 (143)
.+||.. ++.... .. ......++++| ++...++.
T Consensus 247 ~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 247 WRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp EEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred EEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 899985 454321 11 35688999999 56666675
No 207
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.22 E-value=2.7e-06 Score=65.12 Aligned_cols=95 Identities=9% Similarity=0.082 Sum_probs=66.1
Q ss_pred CeEecCCCEEEEEecCC----CCeEEEEECCCceE-----EeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEe
Q psy5876 1 MKLRMRGTHIVLAELRD----TGSLEFVDTGDFSV-----MNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWS 71 (143)
Q Consensus 1 i~~SPdG~~las~~~~~----dg~i~iWd~~~~~~-----~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~ 71 (143)
++|||||+.|..+.... ++.|..||++...+ ...........++++++|++.++.. ++|.+|+
T Consensus 193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~--------~gv~~~~ 264 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG--------TGVCVFD 264 (305)
T ss_dssp EEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS--------SEEEEEC
T ss_pred eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC--------CcEEEEC
Confidence 47999999887776310 26899999875431 1111223456789999999555432 3699999
Q ss_pred ecCcEEEecc-CCcEEEEEEeeCCCeeeecCch
Q psy5876 72 FQGKIIKRFN-SPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 72 ~~g~~l~~~~-~~~v~~l~wsP~~~~l~s~s~d 103 (143)
.+|+.+.... ...+.+++|.|++..|..++.+
T Consensus 265 ~~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 265 SDGQLLGHIPTPGTASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp TTSCEEEEEECSSCCCEEEECTTSCEEEEEETT
T ss_pred CCCCEEEEEECCCceeEEEEeCCCCEEEEEcCC
Confidence 9999887654 3468889999999877765544
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.21 E-value=4.6e-05 Score=57.98 Aligned_cols=90 Identities=10% Similarity=0.162 Sum_probs=63.7
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEE--E
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKII--K 78 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l--~ 78 (143)
.|+|+++.|..... .++.|..||..+++.........+..++++|||+++++ . ++++.+||.+ |+.. .
T Consensus 19 ~w~~~~~~l~~~d~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~-~-------~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 19 VWEEVSNSLLFVDI-PAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVAT-I-------GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp EEETTTTEEEEEET-TTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEE-E-------TTEEEEEETTTTEEEEEE
T ss_pred eEECCCCEEEEEEC-CCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEE-E-------CCeEEEEECCCCcEEEEE
Confidence 69997766666554 47899999998765532222357899999999996554 3 4589999986 4432 2
Q ss_pred ecc----CCcEEEEEEeeCCCeeeec
Q psy5876 79 RFN----SPTFCQLRWRPRPASLLSK 100 (143)
Q Consensus 79 ~~~----~~~v~~l~wsP~~~~l~s~ 100 (143)
... ...++++++.|+|...++.
T Consensus 90 ~~~~~~~~~~~~di~~d~dG~l~~~~ 115 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDPAGRYFAGT 115 (297)
T ss_dssp ECCTTCSSEEEEEEEECTTSCEEEEE
T ss_pred ecCCCCCCCCCCCEEECCCCCEEEec
Confidence 211 2358999999999977764
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.15 E-value=2.2e-05 Score=62.65 Aligned_cols=99 Identities=12% Similarity=-0.018 Sum_probs=68.6
Q ss_pred EecCCCEEEEEec-CCCC--eEEEEECCCceEEeeeccCceEEEEECCCCCEEEEeecCcc----eecCCcEEEEeec-C
Q psy5876 3 LRMRGTHIVLAEL-RDTG--SLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWK----TKADTGYWQWSFQ-G 74 (143)
Q Consensus 3 ~SPdG~~las~~~-~~dg--~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~----~~~D~~i~iW~~~-g 74 (143)
.+|+|+++.++.. +.+. +|.++|..+++.+.+.+......+++||||+++..+...+. -..++.+.+||.. +
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 3588988877652 1111 88999999999887765432239999999999988863211 0136789999994 6
Q ss_pred cEEEeccC---------CcEEEEEEeeCCCeeeecC
Q psy5876 75 KIIKRFNS---------PTFCQLRWRPRPASLLSKE 101 (143)
Q Consensus 75 ~~l~~~~~---------~~v~~l~wsP~~~~l~s~s 101 (143)
+.+..... ..-..++|+|||++|+...
T Consensus 108 ~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n 143 (373)
T 2mad_H 108 LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQ 143 (373)
T ss_pred cEEEEEECCCccccccCCCccceEECCCCCEEEEEe
Confidence 66654321 1234799999999998765
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.14 E-value=2.2e-05 Score=60.90 Aligned_cols=91 Identities=8% Similarity=-0.028 Sum_probs=64.0
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEEEec
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKRF 80 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l~~~ 80 (143)
.|+|+++.|...+. .++.|..||..+++.........+.+++|+|||+++++.. +++.+||.. |+.....
T Consensus 55 ~~~~~~~~l~~~d~-~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~~--------~gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 55 TFDPASGTAWWFNI-LERELHELHLASGRKTVHALPFMGSALAKISDSKQLIASD--------DGLFLRDTATGVLTLHA 125 (326)
T ss_dssp EEETTTTEEEEEEG-GGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEET--------TEEEEEETTTCCEEEEE
T ss_pred eEeCCCCEEEEEEC-CCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEEC--------CCEEEEECCCCcEEEEe
Confidence 69998766655554 4689999999887643222235689999999999887643 358899985 5532211
Q ss_pred c------CCcEEEEEEeeCCCeeeecC
Q psy5876 81 N------SPTFCQLRWRPRPASLLSKE 101 (143)
Q Consensus 81 ~------~~~v~~l~wsP~~~~l~s~s 101 (143)
. ...++++++.|+|...++..
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~ 152 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTM 152 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEE
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeC
Confidence 1 23689999999999777653
No 211
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.09 E-value=7e-05 Score=55.48 Aligned_cols=96 Identities=6% Similarity=0.068 Sum_probs=69.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEe-ee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMN-AA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~-~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l 77 (143)
|+++|+|+..++.. .++.|..||.. ++... .. ....+..++++|+|+.+++.. .++.+..|+.+|+..
T Consensus 20 i~~d~~g~l~v~~~--~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~------~~~~i~~~~~~g~~~ 90 (299)
T 2z2n_A 20 ITVSDKGKVWITQH--KANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTEN------AANKIGRITKKGIIK 90 (299)
T ss_dssp EEECTTSCEEEEET--TTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEET------TTTEEEEECTTSCEE
T ss_pred eEECCCCCEEEEec--CCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCC------CCCeEEEECCCCcEE
Confidence 46789999777654 36889999988 54332 21 234689999999999888766 467899999887642
Q ss_pred Ee-c--cCCcEEEEEEeeCCCeeeecCchhh
Q psy5876 78 KR-F--NSPTFCQLRWRPRPASLLSKEQVDK 105 (143)
Q Consensus 78 ~~-~--~~~~v~~l~wsP~~~~l~s~s~d~~ 105 (143)
.. . ....+..+++.|+|...++......
T Consensus 91 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 121 (299)
T 2z2n_A 91 EYTLPNPDSAPYGITEGPNGDIWFTEMNGNR 121 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred EEeCCCcCCCceeeEECCCCCEEEEecCCce
Confidence 22 2 2457899999999998887654433
No 212
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.03 E-value=7.6e-05 Score=55.30 Aligned_cols=97 Identities=5% Similarity=-0.099 Sum_probs=68.2
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEee-e--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNA-A--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~-~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l 77 (143)
++++|+|+..++.. .++.|..||. +++.... . ....+..++++|+|+.+++.. .++++..|+.+|+..
T Consensus 188 i~~~~~g~l~v~~~--~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~------~~~~i~~~d~~g~~~ 258 (299)
T 2z2n_A 188 ITKGNDDALWFVEI--IGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEW------GANKIGRLTSNNIIE 258 (299)
T ss_dssp EEECTTSSEEEEET--TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET------TTTEEEEEETTTEEE
T ss_pred EEECCCCCEEEEcc--CCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEecc------CCceEEEECCCCceE
Confidence 46789999776654 3688999998 5553321 2 224689999999999777664 367899999977543
Q ss_pred Ee-cc--CCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 78 KR-FN--SPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 78 ~~-~~--~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.. .. ...+.++++ ++|...++.+.++.++
T Consensus 259 ~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~ 290 (299)
T 2z2n_A 259 EYPIQIKSAEPHGICF-DGETIWFAMECDKIGK 290 (299)
T ss_dssp EEECSSSSCCEEEEEE-CSSCEEEEETTTEEEE
T ss_pred EEeCCCCCCccceEEe-cCCCEEEEecCCcEEE
Confidence 22 22 357899999 9999888865444433
No 213
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.01 E-value=5.1e-05 Score=64.74 Aligned_cols=93 Identities=14% Similarity=0.211 Sum_probs=66.3
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCce------------EEeeec-cCceEEEEECCCCCEEEEeecCcceecCCcE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFS------------VMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGY 67 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~------------~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i 67 (143)
+.+||||+++.+++. .+.+|.++|+.+.+ ...+.+ ......++|+||| ++.+... .|+.+
T Consensus 282 v~~sPDGk~v~V~~~-~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~-----ldsqV 354 (595)
T 1fwx_A 282 CNMAPDKKHLCVAGK-LSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLF-----LDSQV 354 (595)
T ss_dssp EEECTTSSEEEEECT-TSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEET-----TTTEE
T ss_pred EEEcCCCCEEEEeCC-CCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEe-----cCCcE
Confidence 468999999999887 58899999999653 333333 3578999999999 6655553 79999
Q ss_pred EEEeecC-----------cEEEeccC-CcEEEE------EEeeCCCeeeec
Q psy5876 68 WQWSFQG-----------KIIKRFNS-PTFCQL------RWRPRPASLLSK 100 (143)
Q Consensus 68 ~iW~~~g-----------~~l~~~~~-~~v~~l------~wsP~~~~l~s~ 100 (143)
..|+++. +.+.+... ...-+. ..+|||++|++.
T Consensus 355 ~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 355 VKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp EEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred EEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence 9999953 34444432 122223 347999999875
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.00 E-value=1.1e-05 Score=65.38 Aligned_cols=98 Identities=6% Similarity=-0.021 Sum_probs=69.0
Q ss_pred EecCCCEEEEEecC---CCCeEEEEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCc-c---eecCCcEEEEeec-
Q psy5876 3 LRMRGTHIVLAELR---DTGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLW-K---TKADTGYWQWSFQ- 73 (143)
Q Consensus 3 ~SPdG~~las~~~~---~dg~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~-~---~~~D~~i~iW~~~- 73 (143)
..|||+.+.++... .++.|.+.|..+++.+.+.+. ... .+++||||+++..++... + -..++.|.+||..
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t 118 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT 118 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 47999999888641 157999999999998877643 223 499999999887765311 0 0125689999995
Q ss_pred CcEEEeccC---------CcEEEEEEeeCCCeeeecC
Q psy5876 74 GKIIKRFNS---------PTFCQLRWRPRPASLLSKE 101 (143)
Q Consensus 74 g~~l~~~~~---------~~v~~l~wsP~~~~l~s~s 101 (143)
++.+..... ..-..++++|||++|....
T Consensus 119 ~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan 155 (386)
T 3sjl_D 119 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ 155 (386)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEE
T ss_pred CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEE
Confidence 666665431 1345689999999877653
No 215
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.97 E-value=5.4e-05 Score=58.65 Aligned_cols=97 Identities=10% Similarity=0.035 Sum_probs=65.8
Q ss_pred CCCEEEEEecCCCCeEEEEECCCceEEeeec-cCceEEEEECCCCCEEEEeecCcc---e-ecCCcEEEEeec-CcEEEe
Q psy5876 6 RGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWK---T-KADTGYWQWSFQ-GKIIKR 79 (143)
Q Consensus 6 dG~~las~~~~~dg~i~iWd~~~~~~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~---~-~~D~~i~iW~~~-g~~l~~ 79 (143)
+++.|.+++.+.++.|.++|..+++.+.+.. ......++++|||++++++..... + ...+.+.++|.. ++....
T Consensus 139 ~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~ 218 (328)
T 3dsm_A 139 YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQ 218 (328)
T ss_dssp ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEE
T ss_pred ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEE
Confidence 3455555543126899999999988776654 234678999999998877763100 0 002689999995 555544
Q ss_pred cc---CCcEEEEEEeeCCCeeeecCc
Q psy5876 80 FN---SPTFCQLRWRPRPASLLSKEQ 102 (143)
Q Consensus 80 ~~---~~~v~~l~wsP~~~~l~s~s~ 102 (143)
.. ......++|+|++..|.....
T Consensus 219 ~~~~~g~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 219 FKFKLGDWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp EECCTTCCCEEEEECTTSCEEEEESS
T ss_pred EecCCCCCceeEEEecCCCEEEEEcc
Confidence 43 236889999999998876543
No 216
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.91 E-value=4e-05 Score=59.66 Aligned_cols=99 Identities=7% Similarity=0.065 Sum_probs=65.5
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECC---Cc-----eE---Eee-eccCceEEEEECCCCCEEEEeecCcceecCCcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTG---DF-----SV---MNA-AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYW 68 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~---~~-----~~---~~~-~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~ 68 (143)
|+|||||++|..+.. ..+.+..++.. .+ +. +.. .+......++++|+|+.+++.. .++.|.
T Consensus 200 ia~s~dg~~ly~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~------~~~~V~ 272 (343)
T 2qe8_A 200 IVLDAENEWLYLSPM-HSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDL------AHSAIG 272 (343)
T ss_dssp EEECTTSCEEEEEES-SCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEG------GGTEEE
T ss_pred eEeccCCCEEEEEeC-CCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEcc------CCCeEE
Confidence 578999999888874 22344444422 10 00 011 1112456799999999888877 578999
Q ss_pred EEee-cCcEEEec--c-CCcEEEEEEeeCCCeeeecCchhhH
Q psy5876 69 QWSF-QGKIIKRF--N-SPTFCQLRWRPRPASLLSKEQVDKI 106 (143)
Q Consensus 69 iW~~-~g~~l~~~--~-~~~v~~l~wsP~~~~l~s~s~d~~i 106 (143)
+||. +|+..... . .....++++.|++..+++.++...+
T Consensus 273 ~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 273 VITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp EEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred EEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 9999 78743322 2 3468899999999999988765433
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.90 E-value=0.00018 Score=57.92 Aligned_cols=101 Identities=7% Similarity=0.051 Sum_probs=67.4
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec---------------cCceEEEEECCCCCEEEEee-cCcceecC
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE---------------HHQATDVEWDPTGRYVMSGV-SLWKTKAD 64 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~---------------~~~v~~i~wsPdG~~lat~s-~~~~~~~D 64 (143)
|+|+|++..|..+.. .++.|+.||.+......... ......++++|+|+.+++-+ . +
T Consensus 272 ia~~p~~g~lyv~d~-~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~------~ 344 (409)
T 3hrp_A 272 LIYYFVDSNFYMSDQ-NLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK------G 344 (409)
T ss_dssp EEEETTTTEEEEEET-TTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT------T
T ss_pred EEEeCCCCEEEEEeC-CCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC------C
Confidence 478996555555443 47899999977432211111 12478999999999766654 3 6
Q ss_pred CcEEEEee-cCcEEEecc----------------CCcEEEEEEeeCCCeeeecCchhhHHh
Q psy5876 65 TGYWQWSF-QGKIIKRFN----------------SPTFCQLRWRPRPASLLSKEQVDKIKK 108 (143)
Q Consensus 65 ~~i~iW~~-~g~~l~~~~----------------~~~v~~l~wsP~~~~l~s~s~d~~i~~ 108 (143)
+.|+.|+. +|....... ...-..+++.|+|..+++......||+
T Consensus 345 ~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~ 405 (409)
T 3hrp_A 345 YCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRK 405 (409)
T ss_dssp CEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEE
T ss_pred CEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEE
Confidence 78999994 565432211 235789999999999998877766653
No 218
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.89 E-value=1.9e-05 Score=64.73 Aligned_cols=101 Identities=9% Similarity=-0.065 Sum_probs=68.6
Q ss_pred CeEecCCCEEEEEecC--------CCCeEEEEECCCceEEeeecc---------CceEEEEECCCCCEEEEeecCcceec
Q psy5876 1 MKLRMRGTHIVLAELR--------DTGSLEFVDTGDFSVMNAAEH---------HQATDVEWDPTGRYVMSGVSLWKTKA 63 (143)
Q Consensus 1 i~~SPdG~~las~~~~--------~dg~i~iWd~~~~~~~~~~~~---------~~v~~i~wsPdG~~lat~s~~~~~~~ 63 (143)
|.+||||++|.+++.. .++.|.++|..+++.+.+..- .....+++||||+++..+... .
T Consensus 123 ia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----~ 198 (426)
T 3c75_H 123 PVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----P 198 (426)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----S
T ss_pred eEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----C
Confidence 5789999999887520 156899999999887765431 234578999999999888631 2
Q ss_pred CCcEEEEeec-CcEEEeccCCcE---E------EEEEeeCCCeeeecCchhh
Q psy5876 64 DTGYWQWSFQ-GKIIKRFNSPTF---C------QLRWRPRPASLLSKEQVDK 105 (143)
Q Consensus 64 D~~i~iW~~~-g~~l~~~~~~~v---~------~l~wsP~~~~l~s~s~d~~ 105 (143)
++.|.+.|.. ++.+.+...... . -++++|+|+.++-...+.+
T Consensus 199 ~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~ 250 (426)
T 3c75_H 199 APAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGE 250 (426)
T ss_dssp SCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTC
T ss_pred CCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCc
Confidence 5789999995 566665543211 1 1567788876654434433
No 219
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.88 E-value=3.8e-05 Score=61.86 Aligned_cols=90 Identities=9% Similarity=-0.024 Sum_probs=61.6
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCcceecCC--cEEEEeecC-cE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADT--GYWQWSFQG-KI 76 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~--~i~iW~~~g-~~ 76 (143)
|+|+|+|+.+++.. .++.|+.||.++++....... .... ++|+|+|++|+.+.. ++ .+.+|+..+ ..
T Consensus 136 la~d~~g~lyv~d~--~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~------~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 136 IAAVGNNTVLAYQR--DDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGW------EGTHTVYVYMKASGWA 206 (409)
T ss_dssp EEECSTTEEEEEET--TTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBS------STTCEEEEEEGGGTTC
T ss_pred EEEeCCCCEEEEec--CCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEec------CCCceEEEEEcCCCce
Confidence 57899999776665 478999999988765443322 2334 999999999888873 33 677888753 33
Q ss_pred EEec------cCCcEEEEEEee-CCCeeee
Q psy5876 77 IKRF------NSPTFCQLRWRP-RPASLLS 99 (143)
Q Consensus 77 l~~~------~~~~v~~l~wsP-~~~~l~s 99 (143)
.... ......+++++| ++..+++
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~ 236 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFV 236 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEE
Confidence 2222 245678899999 5555553
No 220
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.82 E-value=0.00021 Score=55.50 Aligned_cols=99 Identities=13% Similarity=0.042 Sum_probs=64.2
Q ss_pred CeEecCCCEEEEEecCC----CCeEEEEECCCceEEeeecc--------CceEEEEECCCCCEE-EEeecCcceecCCcE
Q psy5876 1 MKLRMRGTHIVLAELRD----TGSLEFVDTGDFSVMNAAEH--------HQATDVEWDPTGRYV-MSGVSLWKTKADTGY 67 (143)
Q Consensus 1 i~~SPdG~~las~~~~~----dg~i~iWd~~~~~~~~~~~~--------~~v~~i~wsPdG~~l-at~s~~~~~~~D~~i 67 (143)
|+++|+|+..++..- . ++.|.+||..+++.+..+.. ..+.+++++|++.++ ++.++. ..++++
T Consensus 72 v~~d~~g~L~v~D~g-~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~---~~~~~i 147 (343)
T 2qe8_A 72 IKSDGNGIVWMLDNG-NQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP---DDKAAL 147 (343)
T ss_dssp EEECSSSEEEEEECH-HHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS---GGGCEE
T ss_pred EEEcCCCcEEEEcCC-CCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc---CCCCeE
Confidence 478899987766431 1 46899999998886554321 246899999976554 443310 026788
Q ss_pred EEEeec-CcEEEeccC-------------------------------CcEEEEEEeeCCCeeeecCch
Q psy5876 68 WQWSFQ-GKIIKRFNS-------------------------------PTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 68 ~iW~~~-g~~l~~~~~-------------------------------~~v~~l~wsP~~~~l~s~s~d 103 (143)
.+||.. |+....... .....++|+|+|+.|......
T Consensus 148 ~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~ 215 (343)
T 2qe8_A 148 IRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH 215 (343)
T ss_dssp EEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS
T ss_pred EEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC
Confidence 999985 554432210 236889999999988765443
No 221
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.79 E-value=0.00055 Score=50.56 Aligned_cols=95 Identities=6% Similarity=-0.018 Sum_probs=68.7
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEe-eec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMN-AAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~-~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l 77 (143)
|+++|+|+..++.. .++.|.+||.. ++... ... ...+..++++|+|+.+++.. .++.+..+|.+|+..
T Consensus 25 i~~d~~g~l~v~~~--~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~------~~~~v~~~d~~g~~~ 95 (300)
T 2qc5_A 25 ITSSEDGKVWFTQH--KANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTEN------GANKIGKLSKKGGFT 95 (300)
T ss_dssp EEECTTSCEEEEET--TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEET------TTTEEEEECTTSCEE
T ss_pred eeECCCCCEEEEcC--CCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEec------CCCeEEEECCCCCeE
Confidence 35789999777764 46899999988 54332 222 24689999999999877765 467899999887654
Q ss_pred Ee-cc--CCcEEEEEEeeCCCeeeecCchh
Q psy5876 78 KR-FN--SPTFCQLRWRPRPASLLSKEQVD 104 (143)
Q Consensus 78 ~~-~~--~~~v~~l~wsP~~~~l~s~s~d~ 104 (143)
.. .. ...+..+++.|+|...++.....
T Consensus 96 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 125 (300)
T 2qc5_A 96 EYPLPQPDSGPYGITEGLNGDIWFTQLNGD 125 (300)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEETTTT
T ss_pred EecCCCCCCCCccceECCCCCEEEEccCCC
Confidence 22 22 35789999999999888765443
No 222
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.79 E-value=8.9e-05 Score=59.54 Aligned_cols=87 Identities=7% Similarity=-0.082 Sum_probs=59.4
Q ss_pred eEecCCCEEEEEec-C-C-----CCeEEEEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCcceecCCcEEEEee-
Q psy5876 2 KLRMRGTHIVLAEL-R-D-----TGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF- 72 (143)
Q Consensus 2 ~~SPdG~~las~~~-~-~-----dg~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~- 72 (143)
+++|||+++..+.. . . ++.+.++|+.+++.+.+.+. .....++|+|||++++.+... .++.+.++|.
T Consensus 270 ~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~----~~~~VsVID~~ 345 (368)
T 1mda_H 270 AKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSA----GTEVLDIYDAA 345 (368)
T ss_dssp EEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEET----TTTEEEEEESS
T ss_pred EEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccC----CCCeEEEEECC
Confidence 58999998887541 0 0 12566999999988887643 368899999999854444410 2789999999
Q ss_pred cCcEEEecc-CCcEEEEEEee
Q psy5876 73 QGKIIKRFN-SPTFCQLRWRP 92 (143)
Q Consensus 73 ~g~~l~~~~-~~~v~~l~wsP 92 (143)
+++.+.... ...-+.+++++
T Consensus 346 t~kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 346 SDQDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp SCEEEEECCCCSCCCEEECCC
T ss_pred CCcEEEEEECCCCCCEEEeec
Confidence 477777665 33344455443
No 223
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.76 E-value=0.00061 Score=50.34 Aligned_cols=96 Identities=6% Similarity=0.011 Sum_probs=68.7
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEE-eeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVM-NAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~-~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l 77 (143)
|+++|+|+..++.. .++.|..+|.+ ++.. .... ...+..++++|+|+.+++.. .++.+..++.+|+..
T Consensus 67 i~~~~~g~l~v~~~--~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~------~~~~i~~~~~~g~~~ 137 (300)
T 2qc5_A 67 LIVSSLGDIWFTEN--GANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQL------NGDRIGKLTADGTIY 137 (300)
T ss_dssp EEECTTSCEEEEET--TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEET------TTTEEEEECTTSCEE
T ss_pred EEECCCCCEEEEec--CCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEcc------CCCeEEEECCCCCEE
Confidence 35789998777654 36889999987 4432 2221 24689999999999888766 467888999887755
Q ss_pred Ee-cc--CCcEEEEEEeeCCCeeeecCchhh
Q psy5876 78 KR-FN--SPTFCQLRWRPRPASLLSKEQVDK 105 (143)
Q Consensus 78 ~~-~~--~~~v~~l~wsP~~~~l~s~s~d~~ 105 (143)
.. .. ......+++.|+|...++......
T Consensus 138 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 168 (300)
T 2qc5_A 138 EYDLPNKGSYPAFITLGSDNALWFTENQNNS 168 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred EccCCCCCCCceeEEECCCCCEEEEecCCCe
Confidence 32 22 457899999999997777654433
No 224
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.74 E-value=0.00034 Score=59.63 Aligned_cols=94 Identities=7% Similarity=0.054 Sum_probs=58.2
Q ss_pred CeEecCCCEEEEEecCC-----------CCeEEEEECCCce----EEeeecc---CceEEEEECCCCCEEEEeecCccee
Q psy5876 1 MKLRMRGTHIVLAELRD-----------TGSLEFVDTGDFS----VMNAAEH---HQATDVEWDPTGRYVMSGVSLWKTK 62 (143)
Q Consensus 1 i~~SPdG~~las~~~~~-----------dg~i~iWd~~~~~----~~~~~~~---~~v~~i~wsPdG~~lat~s~~~~~~ 62 (143)
++|| ||+.|+.+.... ...|.+|++.+.. ++..... ..+.++.|||||++|+..+....
T Consensus 180 ~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-- 256 (693)
T 3iuj_A 180 ISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST-- 256 (693)
T ss_dssp CEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS--
T ss_pred EEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC--
Confidence 5799 999999887410 1349999988643 4444332 23688999999999866553110
Q ss_pred cCCcEEEEeecCc--EEEe--ccCCcEEEEEEeeCCCeee
Q psy5876 63 ADTGYWQWSFQGK--IIKR--FNSPTFCQLRWRPRPASLL 98 (143)
Q Consensus 63 ~D~~i~iW~~~g~--~l~~--~~~~~v~~l~wsP~~~~l~ 98 (143)
.++.++++++++. .... .+.+..... |+|+|..|+
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~ 295 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLY 295 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEE
T ss_pred CCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEE
Confidence 2358899998532 2222 223334443 677776555
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.72 E-value=9.7e-05 Score=60.55 Aligned_cols=75 Identities=8% Similarity=0.094 Sum_probs=57.5
Q ss_pred CeEecCCCEEEEEecC--------CCCeEEEEECCCceEEeeecc-CceEEEEECCCCC-EEEEeecCcceecCCcEEEE
Q psy5876 1 MKLRMRGTHIVLAELR--------DTGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGR-YVMSGVSLWKTKADTGYWQW 70 (143)
Q Consensus 1 i~~SPdG~~las~~~~--------~dg~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~-~lat~s~~~~~~~D~~i~iW 70 (143)
++++|||++|.++..+ ..++|.+.|+.+++.+.+..- .....++|+|||+ +++++.. .++.+.++
T Consensus 324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~-----~s~~VsVI 398 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSA-----GTQTLHIY 398 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEET-----TTTEEEEE
T ss_pred eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcC-----CCCeEEEE
Confidence 3688999977665310 125799999999998887753 3588999999999 7777763 48899999
Q ss_pred ee-cCcEEEec
Q psy5876 71 SF-QGKIIKRF 80 (143)
Q Consensus 71 ~~-~g~~l~~~ 80 (143)
|. +++.+.+.
T Consensus 399 D~~t~kvv~tI 409 (426)
T 3c75_H 399 DAATGEELRSV 409 (426)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCCEEEEe
Confidence 99 57777664
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.71 E-value=0.00041 Score=57.53 Aligned_cols=100 Identities=15% Similarity=0.175 Sum_probs=65.4
Q ss_pred eEecCCCEEEEEecC-----------------CCCeEEEEECCCceEEeeecc----CceEEEEE--CCCCCEEEEeecC
Q psy5876 2 KLRMRGTHIVLAELR-----------------DTGSLEFVDTGDFSVMNAAEH----HQATDVEW--DPTGRYVMSGVSL 58 (143)
Q Consensus 2 ~~SPdG~~las~~~~-----------------~dg~i~iWd~~~~~~~~~~~~----~~v~~i~w--sPdG~~lat~s~~ 58 (143)
.|+|+++.++++.++ ...+|.+||.++++.+.+... .....+.| +|+|+++..++..
T Consensus 194 ~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~ 273 (462)
T 2ece_A 194 WWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVV 273 (462)
T ss_dssp EEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEE
T ss_pred EECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEee
Confidence 479999999998521 157999999999887776543 24566766 9999988777620
Q ss_pred cceecCCcEEEEeec-CcE--EEe--cc------------------CCcEEEEEEeeCCCeeeecC
Q psy5876 59 WKTKADTGYWQWSFQ-GKI--IKR--FN------------------SPTFCQLRWRPRPASLLSKE 101 (143)
Q Consensus 59 ~~~~~D~~i~iW~~~-g~~--l~~--~~------------------~~~v~~l~wsP~~~~l~s~s 101 (143)
..-..++.|.+|..+ |.. +.. .. .....++.++|||+.|..+.
T Consensus 274 ~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSn 339 (462)
T 2ece_A 274 SLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSL 339 (462)
T ss_dssp ETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEE
T ss_pred eccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEe
Confidence 000025577777664 321 110 00 13467899999999887543
No 227
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.49 E-value=0.0011 Score=50.96 Aligned_cols=94 Identities=12% Similarity=0.145 Sum_probs=67.6
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeecc-------CceEEEEECCCCCEEEEeecCcceecCCcEEEEee-c
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-------HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-Q 73 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~-------~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~ 73 (143)
.++|||++|.++. .++.|.+.|..+++.+.+..- ...+.+.|. ||+.+++.. .++.|.+-|. +
T Consensus 111 glt~Dg~~l~vs~--gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~------~~~~V~vID~~t 181 (266)
T 2iwa_A 111 GLATDGKILYGSD--GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIW------QTDCIARISAKD 181 (266)
T ss_dssp EEEECSSSEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET------TSSEEEEEETTT
T ss_pred EEEECCCEEEEEC--CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecC------CCCeEEEEECCC
Confidence 4689999888876 478999999999876655421 246788999 886555544 4678999999 5
Q ss_pred CcEEEeccC---------------CcEEEEEEeeCCCeee-ecCchh
Q psy5876 74 GKIIKRFNS---------------PTFCQLRWRPRPASLL-SKEQVD 104 (143)
Q Consensus 74 g~~l~~~~~---------------~~v~~l~wsP~~~~l~-s~s~d~ 104 (143)
|+.+..... ...+.++|+|++++++ ++....
T Consensus 182 g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 182 GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCC
Confidence 776665431 3568999999997655 554433
No 228
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.46 E-value=0.0011 Score=57.30 Aligned_cols=71 Identities=6% Similarity=-0.072 Sum_probs=47.3
Q ss_pred CeEecCCCEEEEEecCCC---CeEEEEECCCce----EEeeec-cCceEEEEECCCCCEEEEeecCcceecCCcEEEEee
Q psy5876 1 MKLRMRGTHIVLAELRDT---GSLEFVDTGDFS----VMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF 72 (143)
Q Consensus 1 i~~SPdG~~las~~~~~d---g~i~iWd~~~~~----~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~ 72 (143)
++|||||+.|+....+.. ..|.++++.+.. ++.... .....++.|||||++|+..+... ..+.++++|+
T Consensus 226 ~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~---~~~~l~~~d~ 302 (751)
T 2xe4_A 226 IVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP---ETAEVHLLDL 302 (751)
T ss_dssp CEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECS---SCEEEEEEES
T ss_pred EEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCC---CCceEEEEEC
Confidence 479999999888764211 368888887642 333322 23467899999999998776311 2446778888
Q ss_pred cC
Q psy5876 73 QG 74 (143)
Q Consensus 73 ~g 74 (143)
++
T Consensus 303 ~~ 304 (751)
T 2xe4_A 303 RK 304 (751)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 229
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.38 E-value=0.00046 Score=55.38 Aligned_cols=81 Identities=10% Similarity=-0.125 Sum_probs=58.6
Q ss_pred eEEEEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCc-c---eecCCcEEEEee-cCcEEEeccC---------Cc
Q psy5876 20 SLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLW-K---TKADTGYWQWSF-QGKIIKRFNS---------PT 84 (143)
Q Consensus 20 ~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~-~---~~~D~~i~iW~~-~g~~l~~~~~---------~~ 84 (143)
+|.+.|..+++.+.++.. ..- .+.+||||+++..+.... + -..++.|.+||. +++.+.+... ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~ 125 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPR 125 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCC
T ss_pred eEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCC
Confidence 888999999998887642 223 899999999888876311 0 013678999999 4777766531 23
Q ss_pred EEEEEEeeCCCeeeecC
Q psy5876 85 FCQLRWRPRPASLLSKE 101 (143)
Q Consensus 85 v~~l~wsP~~~~l~s~s 101 (143)
-..++++|||++|+.+.
T Consensus 126 P~~ia~SpDGk~lyVan 142 (368)
T 1mda_H 126 VHIIGNCASSACLLFFL 142 (368)
T ss_dssp TTSEEECTTSSCEEEEE
T ss_pred cceEEEcCCCCEEEEEc
Confidence 45789999999888653
No 230
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.37 E-value=0.00087 Score=57.16 Aligned_cols=101 Identities=7% Similarity=-0.000 Sum_probs=67.7
Q ss_pred CeEecCCCEEEEEecCC-C-----------------------------------CeEEEEECCC--ceE-Eeeec-cCce
Q psy5876 1 MKLRMRGTHIVLAELRD-T-----------------------------------GSLEFVDTGD--FSV-MNAAE-HHQA 40 (143)
Q Consensus 1 i~~SPdG~~las~~~~~-d-----------------------------------g~i~iWd~~~--~~~-~~~~~-~~~v 40 (143)
++.||||+++.+++.+. . +.|.+.|..+ ++. +...+ ....
T Consensus 200 ~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~P 279 (595)
T 1fwx_A 200 CDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNP 279 (595)
T ss_dssp EEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSC
T ss_pred eEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCc
Confidence 36789999999887531 0 1366666665 332 22222 2345
Q ss_pred EEEEECCCCCEEEEeecCcceecCCcEEEEeecCc-------------EEEecc-CCcEEEEEEeeCCCeeeecCchhhH
Q psy5876 41 TDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGK-------------IIKRFN-SPTFCQLRWRPRPASLLSKEQVDKI 106 (143)
Q Consensus 41 ~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~-------------~l~~~~-~~~v~~l~wsP~~~~l~s~s~d~~i 106 (143)
.++.+||||+|++.++. .++.+.++|+... .+.+.. ...-.+++|+|+|...++...+.+|
T Consensus 280 hGv~~sPDGk~v~V~~~-----~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV 354 (595)
T 1fwx_A 280 HGCNMAPDKKHLCVAGK-----LSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQV 354 (595)
T ss_dssp CCEEECTTSSEEEEECT-----TSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEE
T ss_pred eEEEEcCCCCEEEEeCC-----CCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcE
Confidence 67899999999988885 6889999999632 233333 4578899999999544555556555
No 231
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.30 E-value=0.003 Score=48.66 Aligned_cols=91 Identities=13% Similarity=0.259 Sum_probs=64.4
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeec-------cCceEEEEECCCCCEEEEeecCcceecCCcEEEEee-c
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-------HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-Q 73 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~-------~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~ 73 (143)
.+++||+.|..+. .++.|.++|..+++.+.+.. ...++.+.|. +|+.+|..- .++.|.+-|. +
T Consensus 131 glt~dg~~L~~Sd--Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w------~~~~I~vIDp~t 201 (262)
T 3nol_A 131 GLTHNDQYLIMSD--GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVW------QTNKIVRIDPET 201 (262)
T ss_dssp CEEECSSCEEECC--SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEET------TSSEEEEECTTT
T ss_pred EEecCCCEEEEEC--CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEc------cCCeEEEEECCC
Confidence 4578898888775 36789999999987766532 1345678887 887555443 4678888898 5
Q ss_pred CcEEEecc--------------CCcEEEEEEeeCCCeeeecC
Q psy5876 74 GKIIKRFN--------------SPTFCQLRWRPRPASLLSKE 101 (143)
Q Consensus 74 g~~l~~~~--------------~~~v~~l~wsP~~~~l~s~s 101 (143)
|+.+.... .+..+.|||.|++.+|.-.+
T Consensus 202 G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 202 GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 77665432 13578999999988776544
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.21 E-value=0.006 Score=50.56 Aligned_cols=96 Identities=13% Similarity=0.205 Sum_probs=68.5
Q ss_pred e--cCCCEEEEEecCCCCeEEEEECCCc----eEEeeec--------c-CceEEEEECCCCCEEEEeecCcceecCCcEE
Q psy5876 4 R--MRGTHIVLAELRDTGSLEFVDTGDF----SVMNAAE--------H-HQATDVEWDPTGRYVMSGVSLWKTKADTGYW 68 (143)
Q Consensus 4 S--PdG~~las~~~~~dg~i~iWd~~~~----~~~~~~~--------~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~ 68 (143)
+ +++++|.+.+. .++.|.+.|+.+. +...+.+ . ...-.+..+||| .++++..+..-...++|.
T Consensus 90 ~~~~~r~~l~v~~l-~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 90 KPNIERRFLIVPGL-RSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGIL 167 (462)
T ss_dssp CTTCCSCEEEEEBT-TTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred CCCccCCEEEEccC-CCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence 7 99999999887 5889999998753 5555552 1 134567889999 666665321111237899
Q ss_pred EEeec-CcEEEeccC-----CcEEEEEEeeCCCeeeecC
Q psy5876 69 QWSFQ-GKIIKRFNS-----PTFCQLRWRPRPASLLSKE 101 (143)
Q Consensus 69 iW~~~-g~~l~~~~~-----~~v~~l~wsP~~~~l~s~s 101 (143)
+.|.. ++.+.++.. ..-+++.|+|+++.+++.+
T Consensus 168 vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~ 206 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSE 206 (462)
T ss_dssp EECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECB
T ss_pred EEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEcc
Confidence 99985 777877652 2346799999999999884
No 233
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.14 E-value=0.0039 Score=47.62 Aligned_cols=100 Identities=10% Similarity=0.101 Sum_probs=62.8
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCC-----ceEEeeeccCceEEEEECCCCCEEEEeecCc----ceecCCcEEEEe
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGD-----FSVMNAAEHHQATDVEWDPTGRYVMSGVSLW----KTKADTGYWQWS 71 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~-----~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~----~~~~D~~i~iW~ 71 (143)
|+|+|||++|..+.. .++.|..++.+. .+.+.... . ...++.+++|++.++..... .....+.+..+|
T Consensus 190 ia~~~dg~~lyv~d~-~~~~I~~~~~~~~~~~~~~~~~~~~-g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d 266 (322)
T 2fp8_A 190 AEVSADSSFVLVAEF-LSHQIVKYWLEGPKKGTAEVLVKIP-N-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFD 266 (322)
T ss_dssp EEECTTSSEEEEEEG-GGTEEEEEESSSTTTTCEEEEEECS-S-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEEC
T ss_pred eEECCCCCEEEEEeC-CCCeEEEEECCCCcCCccceEEeCC-C-CCCeEECCCCCEEEEecCcccccccCCCccEEEEEC
Confidence 579999997766643 367899999764 22222222 2 78899999999777665200 000134677888
Q ss_pred ecCcEEEecc------CCcEEEEEEeeCCCeeeecCchh
Q psy5876 72 FQGKIIKRFN------SPTFCQLRWRPRPASLLSKEQVD 104 (143)
Q Consensus 72 ~~g~~l~~~~------~~~v~~l~wsP~~~~l~s~s~d~ 104 (143)
.+|+.+.... ...+..+++ +++...++.....
T Consensus 267 ~~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~ 304 (322)
T 2fp8_A 267 EFGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHG 304 (322)
T ss_dssp TTSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCS
T ss_pred CCCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCC
Confidence 8888776543 134566666 5777777754443
No 234
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.12 E-value=0.0047 Score=47.77 Aligned_cols=90 Identities=11% Similarity=0.189 Sum_probs=64.2
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeec-------cCceEEEEECCCCCEEEEeecCcceecCCcEEEEee-c
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-------HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-Q 73 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~-------~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~ 73 (143)
..++||+.|..+. .++.|.++|..+++.+.+.. ...++.+.|. +|+.+|..- .++.|.+-|. +
T Consensus 140 GLt~Dg~~L~vSd--Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw------~s~~I~vIDp~T 210 (268)
T 3nok_A 140 GLCYWNGKLVRSD--GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIW------HSSDVLEIDPAT 210 (268)
T ss_dssp CEEEETTEEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET------TCSEEEEECTTT
T ss_pred EEecCCCEEEEEC--CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEEC------CCCeEEEEeCCC
Confidence 3568899888876 47899999999988766542 1246788998 887665543 4678888888 5
Q ss_pred CcEEEecc---------------CCcEEEEEEeeCCCeeeec
Q psy5876 74 GKIIKRFN---------------SPTFCQLRWRPRPASLLSK 100 (143)
Q Consensus 74 g~~l~~~~---------------~~~v~~l~wsP~~~~l~s~ 100 (143)
|+.+.... .+..+.|||.|++.+|+-.
T Consensus 211 G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 211 GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence 77665421 1367999999987766543
No 235
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.10 E-value=0.02 Score=42.31 Aligned_cols=94 Identities=7% Similarity=-0.018 Sum_probs=63.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 78 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~ 78 (143)
++|+|+++.|..+.. .++.|..+|.+......... ......++++|++++|..+.. ..+.|.+++.+|....
T Consensus 41 i~~d~~~~~ly~~d~-~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~-----~~~~I~~~~~~g~~~~ 114 (267)
T 1npe_A 41 LAFDCVDKVVYWTDI-SEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS-----QLDRIEVAKMDGTQRR 114 (267)
T ss_dssp EEEETTTTEEEEEET-TTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCE
T ss_pred EEEecCCCEEEEEEC-CCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEEC-----CCCEEEEEEcCCCCEE
Confidence 468898877777765 47899999987643222222 246789999998776666553 4678889999875322
Q ss_pred ec---cCCcEEEEEEeeCCCe-eeec
Q psy5876 79 RF---NSPTFCQLRWRPRPAS-LLSK 100 (143)
Q Consensus 79 ~~---~~~~v~~l~wsP~~~~-l~s~ 100 (143)
.. ....-..+++.|++.. .++.
T Consensus 115 ~~~~~~~~~P~~i~vd~~~g~lyv~~ 140 (267)
T 1npe_A 115 VLFDTGLVNPRGIVTDPVRGNLYWTD 140 (267)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEE
T ss_pred EEEECCCCCccEEEEeeCCCEEEEEE
Confidence 21 2245689999996554 4454
No 236
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.98 E-value=0.0086 Score=45.52 Aligned_cols=90 Identities=7% Similarity=-0.027 Sum_probs=62.4
Q ss_pred ecCCCEEEEEecCCCCeEEEEECCC-ceE--Eeee-ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE-
Q psy5876 4 RMRGTHIVLAELRDTGSLEFVDTGD-FSV--MNAA-EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK- 78 (143)
Q Consensus 4 SPdG~~las~~~~~dg~i~iWd~~~-~~~--~~~~-~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~- 78 (143)
+|||++|..+.. ..+.|..+|.+. ++. ...+ .......++++|+|+++++.. ..+.|.+++.+|+...
T Consensus 175 s~dg~~lyv~d~-~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~------~~~~V~~~~~~G~~~~~ 247 (306)
T 2p4o_A 175 KRFGNFLYVSNT-EKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATH------IYNSVVRIAPDRSTTII 247 (306)
T ss_dssp EEETTEEEEEET-TTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECB------TTCCEEEECTTCCEEEE
T ss_pred CcCCCEEEEEeC-CCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeC------CCCeEEEECCCCCEEEE
Confidence 788988877765 478899999764 321 1111 113456789999999877766 4678999999988643
Q ss_pred -ecc--CCcEEEEEEe---eCCCeeeec
Q psy5876 79 -RFN--SPTFCQLRWR---PRPASLLSK 100 (143)
Q Consensus 79 -~~~--~~~v~~l~ws---P~~~~l~s~ 100 (143)
... .....+++|. |++..|.-.
T Consensus 248 ~~~~~~~~~p~~~a~~g~~~d~~~LyVt 275 (306)
T 2p4o_A 248 AQAEQGVIGSTAVAFGQTEGDCTAIYVV 275 (306)
T ss_dssp ECGGGTCTTEEEEEECCSTTTTTEEEEE
T ss_pred eecccccCCceEEEEecccCCCCEEEEE
Confidence 333 3578999998 897766543
No 237
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.95 E-value=0.0024 Score=54.65 Aligned_cols=75 Identities=16% Similarity=0.106 Sum_probs=55.4
Q ss_pred CeEEEEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEEEecc-CC--cEEEEEEeeC
Q psy5876 19 GSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRFN-SP--TFCQLRWRPR 93 (143)
Q Consensus 19 g~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l~~~~-~~--~v~~l~wsP~ 93 (143)
|.|..||..+++.+-+.++ .++....++++|..++.++ .|+.+++||. +|+.+.++. .. .-.-+.|.++
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~------~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~ 530 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGT------ADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVD 530 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC------TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEEC------CCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeC
Confidence 7899999999998776543 3455566778888888887 6999999998 699988764 21 2234567789
Q ss_pred CCeeee
Q psy5876 94 PASLLS 99 (143)
Q Consensus 94 ~~~l~s 99 (143)
|+.++.
T Consensus 531 G~~~v~ 536 (677)
T 1kb0_A 531 GRQYVS 536 (677)
T ss_dssp TEEEEE
T ss_pred CEEEEE
Confidence 876554
No 238
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.93 E-value=0.014 Score=44.37 Aligned_cols=91 Identities=11% Similarity=0.255 Sum_probs=63.7
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeec-------cCceEEEEECCCCCEEEEeecCcceecCCcEEEEee-c
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-------HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-Q 73 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~-------~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~ 73 (143)
.+.+||+.|..+. .++.|.++|..+++.+.+.+ ...++.+.|. +|+.+|..- .++.|.+-|. +
T Consensus 109 glt~dg~~L~vSd--gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw------~s~~I~vIDp~t 179 (243)
T 3mbr_X 109 ALTSDDSHLYMSD--GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVW------LTSRIARIDPAS 179 (243)
T ss_dssp EEEECSSCEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET------TTTEEEEECTTT
T ss_pred EEeeCCCEEEEEC--CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEEC------CCCeEEEEECCC
Confidence 3568888887775 47899999999987765542 1356788887 887665543 3668888888 5
Q ss_pred CcEEEecc---------------CCcEEEEEEeeCCCeeeecC
Q psy5876 74 GKIIKRFN---------------SPTFCQLRWRPRPASLLSKE 101 (143)
Q Consensus 74 g~~l~~~~---------------~~~v~~l~wsP~~~~l~s~s 101 (143)
|+.+.... .+..+.|+|.|++.+|.-.+
T Consensus 180 G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 180 GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 77665421 13578999999887666443
No 239
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.90 E-value=0.024 Score=43.03 Aligned_cols=54 Identities=15% Similarity=0.258 Sum_probs=37.9
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeeccCceEEEEECCCCCEEEEee
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGV 56 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s 56 (143)
++|+|+|+.+++.. .++.|..||.+...............++++|||+.+++..
T Consensus 37 ia~~~~g~lyv~d~--~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~ 90 (306)
T 2p4o_A 37 LASAPDGTIFVTNH--EVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGW 90 (306)
T ss_dssp EEECTTSCEEEEET--TTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEE
T ss_pred EEECCCCCEEEEeC--CCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEec
Confidence 47899999766654 4789999997753222111234688999999999777654
No 240
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.86 E-value=0.0034 Score=53.83 Aligned_cols=75 Identities=12% Similarity=0.081 Sum_probs=54.8
Q ss_pred CeEEEEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEEEecc-CC--cEEEEEEeeC
Q psy5876 19 GSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRFN-SP--TFCQLRWRPR 93 (143)
Q Consensus 19 g~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l~~~~-~~--~v~~l~wsP~ 93 (143)
|.|.-||..+++.+-+.+. .....-.+++.|..++.++ .|+.++.||. +|++|.+.. .. .-.-+.|.++
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt------~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~ 528 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGS------ADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVD 528 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC------TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred eeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEEC------CCCcEEEEECCCCccceeeeCCCCcccCceEEEEC
Confidence 7899999999998766542 3344446777888888887 6999999998 599987653 21 2234677889
Q ss_pred CCeeee
Q psy5876 94 PASLLS 99 (143)
Q Consensus 94 ~~~l~s 99 (143)
|+..+.
T Consensus 529 G~qyv~ 534 (689)
T 1yiq_A 529 GEQYVT 534 (689)
T ss_dssp TEEEEE
T ss_pred CEEEEE
Confidence 975554
No 241
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.85 E-value=0.012 Score=46.28 Aligned_cols=98 Identities=9% Similarity=0.141 Sum_probs=57.5
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec-----cCceEEEEECCC---CCEE-EEeecCcceecCCcEEEEe
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-----HHQATDVEWDPT---GRYV-MSGVSLWKTKADTGYWQWS 71 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~-----~~~v~~i~wsPd---G~~l-at~s~~~~~~~D~~i~iW~ 71 (143)
|+|.|||+++++- .+|.|.+++..+.+.+.... ......|+|+|| +++| ++.+.... ...+.|..++
T Consensus 36 ia~~pdG~l~V~e---~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~-~~~~~v~r~~ 111 (352)
T 2ism_A 36 LAFLPDGGMLIAE---RPGRIRLFREGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEG-GLRNQVVRLR 111 (352)
T ss_dssp EEECTTSCEEEEE---TTTEEEEEETTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTT-SSEEEEEEEE
T ss_pred EEEcCCCeEEEEe---CCCeEEEEECCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCC-CCccEEEEEE
Confidence 5789999966654 36999999822222222221 246899999999 5544 44331000 0014566677
Q ss_pred ecCc------EEEe-cc-----CCcEEEEEEeeCCCeeeecCc
Q psy5876 72 FQGK------IIKR-FN-----SPTFCQLRWRPRPASLLSKEQ 102 (143)
Q Consensus 72 ~~g~------~l~~-~~-----~~~v~~l~wsP~~~~l~s~s~ 102 (143)
.++. .+.. .. .+.-..++|.|||...++.++
T Consensus 112 ~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~ 154 (352)
T 2ism_A 112 HLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGE 154 (352)
T ss_dssp ECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCC
T ss_pred eCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECC
Confidence 6542 1221 22 123468999999988888654
No 242
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.79 E-value=0.064 Score=39.49 Aligned_cols=102 Identities=11% Similarity=0.029 Sum_probs=62.7
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCc--eEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDF--SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 78 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~--~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~ 78 (143)
|+++|+++.|..+.. ..+.|.+++.+.. +.+..........++++|++.+|..+... ...+.|..++.+|....
T Consensus 84 ia~d~~~~~lyv~d~-~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~---~~~~~I~~~~~dg~~~~ 159 (267)
T 1npe_A 84 IALDHLGRTIFWTDS-QLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWN---RDNPKIETSHMDGTNRR 159 (267)
T ss_dssp EEEETTTTEEEEEET-TTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECC---SSSCEEEEEETTSCCCE
T ss_pred EEEEecCCeEEEEEC-CCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECC---CCCcEEEEEecCCCCcE
Confidence 467888777766654 4678999997642 22222222467899999976655444420 01357778888876433
Q ss_pred e---ccCCcEEEEEEeeCCCee-eecCchhhH
Q psy5876 79 R---FNSPTFCQLRWRPRPASL-LSKEQVDKI 106 (143)
Q Consensus 79 ~---~~~~~v~~l~wsP~~~~l-~s~s~d~~i 106 (143)
. .....-..+++.|++..| ++......|
T Consensus 160 ~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I 191 (267)
T 1npe_A 160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRA 191 (267)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEECCCCCCcEEEEcCCCCEEEEEECCCCEE
Confidence 2 223457889999987655 454444333
No 243
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.73 E-value=0.013 Score=46.24 Aligned_cols=96 Identities=8% Similarity=0.099 Sum_probs=57.7
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCce-EEeeec-----cCceEEEEECCC----CCEEEEeecCcceecC----Cc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFS-VMNAAE-----HHQATDVEWDPT----GRYVMSGVSLWKTKAD----TG 66 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~-~~~~~~-----~~~v~~i~wsPd----G~~lat~s~~~~~~~D----~~ 66 (143)
|+|.|||+++++- .+|.|.++|. +++ .+.... ......|+++|| |+.+++-+... .+ +.
T Consensus 34 ia~~pdG~l~V~e---~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~---~~~~~~~~ 106 (354)
T 3a9g_A 34 IAPLGGGRYLVTE---RPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFA---EGGHIRNR 106 (354)
T ss_dssp EEEEETTEEEEEE---TTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEEC---GGGCEEEE
T ss_pred EEEcCCCeEEEEe---CCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccC---CCCCcceE
Confidence 5789999866654 3699999974 343 332211 245889999998 54444443100 12 45
Q ss_pred EEEEeecCc--------EEEe-cc---CCcEEEEEEeeCCCeeeecCch
Q psy5876 67 YWQWSFQGK--------IIKR-FN---SPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 67 i~iW~~~g~--------~l~~-~~---~~~v~~l~wsP~~~~l~s~s~d 103 (143)
|..|+.++. .+.. .. .+.-..++|.|||...++.++.
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~ 155 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDA 155 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCT
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCC
Confidence 666776543 1211 21 1234679999999988886553
No 244
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.70 E-value=0.007 Score=46.51 Aligned_cols=94 Identities=13% Similarity=0.076 Sum_probs=63.5
Q ss_pred EecCCCEEEEEecCCCCeEEEEECCCceEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEEEecc
Q psy5876 3 LRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKRFN 81 (143)
Q Consensus 3 ~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l~~~~ 81 (143)
+.++|+.|..++. .++.+.++|..+++.+.+++...-.....+|||+.+..+. .++.+.+.|.. .+.+....
T Consensus 71 i~~~g~~lyv~t~-~~~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~------gs~~l~viD~~t~~v~~~I~ 143 (266)
T 2iwa_A 71 LTLLNEKLYQVVW-LKNIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSD------GTSILYEIDPHTFKLIKKHN 143 (266)
T ss_dssp EEEETTEEEEEET-TCSEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEEC------SSSEEEEECTTTCCEEEEEE
T ss_pred EEEeCCEEEEEEe-cCCEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEEC------CCCeEEEEECCCCcEEEEEE
Confidence 4556778877776 5899999999999988877432112244666888777655 37789999985 45555433
Q ss_pred -------CCcEEEEEEeeCCCeeeecCchh
Q psy5876 82 -------SPTFCQLRWRPRPASLLSKEQVD 104 (143)
Q Consensus 82 -------~~~v~~l~wsP~~~~l~s~s~d~ 104 (143)
...++.+.|. +|...++.....
T Consensus 144 Vg~~~~p~~~~nele~~-dg~lyvn~~~~~ 172 (266)
T 2iwa_A 144 VKYNGHRVIRLNELEYI-NGEVWANIWQTD 172 (266)
T ss_dssp CEETTEECCCEEEEEEE-TTEEEEEETTSS
T ss_pred ECCCCcccccceeEEEE-CCEEEEecCCCC
Confidence 1247888998 776666654433
No 245
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.67 E-value=0.0016 Score=51.34 Aligned_cols=66 Identities=12% Similarity=0.074 Sum_probs=44.1
Q ss_pred CCCEEEEEecCCCCeEEEEECCCceEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEEEe
Q psy5876 6 RGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 79 (143)
Q Consensus 6 dG~~las~~~~~dg~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l~~ 79 (143)
+|..|++++ .||.|..||..+++.+-+++...+.+..+.++|+.+++++ .|+.++.||. +|+.+.+
T Consensus 8 ~~~~v~~gs--~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~v~~s------~dg~l~a~d~~tG~~~w~ 74 (369)
T 2hz6_A 8 PETLLFVST--LDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAFLPDP------NDGSLYTLGSKNNEGLTK 74 (369)
T ss_dssp CTTEEEEEE--TTSEEEEEETTTCCEEEEEECCCSCCCC-----CCEEECT------TTCCEEEC-----CCSEE
T ss_pred eCCEEEEEc--CCCEEEEEECCCCCEEEEecCCCceecceEcCCCEEEEeC------CCCEEEEEECCCCceeee
Confidence 577888888 5899999999999987665444555556678888888776 5889999999 6876544
No 246
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.61 E-value=0.022 Score=43.38 Aligned_cols=95 Identities=11% Similarity=0.157 Sum_probs=66.3
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeeec---cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec--Cc
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE---HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ--GK 75 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~---~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~--g~ 75 (143)
|+|.|+++.|.+... .++.|...|.. ++.+.+.. ....-.|++.++|+|+++.- .++.+.++++. +.
T Consensus 32 la~~~~~~~L~aV~d-~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E------~~~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 32 LTWSAQSNTLFSTIN-KPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDE------RDYAIYVISLTPNSE 103 (255)
T ss_dssp EEEETTTTEEEEEEE-TTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEET------TTTEEEEEEECTTCC
T ss_pred eEEeCCCCEEEEEEC-CCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEEC------CCCcEEEEEcCCCCe
Confidence 578998887776543 47888888987 77766653 24678999999999877643 46778888874 32
Q ss_pred --EEEec-------c-CCcEEEEEEeeCCCeeeecCch
Q psy5876 76 --IIKRF-------N-SPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 76 --~l~~~-------~-~~~v~~l~wsP~~~~l~s~s~d 103 (143)
.+... . ...+-.++|.|++++|..+.+.
T Consensus 104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~ 141 (255)
T 3qqz_A 104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEK 141 (255)
T ss_dssp EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEES
T ss_pred eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECc
Confidence 11211 1 2357899999999888776553
No 247
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.58 E-value=0.044 Score=41.59 Aligned_cols=95 Identities=11% Similarity=0.034 Sum_probs=58.6
Q ss_pred CeEec-CCCEEEEEec---------------CCCCeEEEEECCCceEEeeec-cCceEEEEECCCCCEEEEeecCcceec
Q psy5876 1 MKLRM-RGTHIVLAEL---------------RDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKA 63 (143)
Q Consensus 1 i~~SP-dG~~las~~~---------------~~dg~i~iWd~~~~~~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~ 63 (143)
+++.| +|+..++... ..+|.|..+|..+++...... ......|+|+|||++|..+.. .
T Consensus 131 i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~-----~ 205 (322)
T 2fp8_A 131 VTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEF-----L 205 (322)
T ss_dssp EEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEG-----G
T ss_pred EEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeC-----C
Confidence 35678 8887766421 013678888887665432211 234578999999997666543 4
Q ss_pred CCcEEEEeecCc----E-EEeccCCcEEEEEEeeCCCeeeecC
Q psy5876 64 DTGYWQWSFQGK----I-IKRFNSPTFCQLRWRPRPASLLSKE 101 (143)
Q Consensus 64 D~~i~iW~~~g~----~-l~~~~~~~v~~l~wsP~~~~l~s~s 101 (143)
.+.|..+++++. . ....... -..+++.|+|...++..
T Consensus 206 ~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 206 SHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp GTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEE
T ss_pred CCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEec
Confidence 678888888642 1 1111122 56678888888766653
No 248
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.42 E-value=0.0049 Score=52.78 Aligned_cols=101 Identities=11% Similarity=0.089 Sum_probs=67.0
Q ss_pred cCC---CEEEEEecCCCCeEEEEECCCceEEeeeccCc-------------e------------------------EEEE
Q psy5876 5 MRG---THIVLAELRDTGSLEFVDTGDFSVMNAAEHHQ-------------A------------------------TDVE 44 (143)
Q Consensus 5 PdG---~~las~~~~~dg~i~iWd~~~~~~~~~~~~~~-------------v------------------------~~i~ 44 (143)
.|| +.|+.++ .+|.+.++|..+++.+...+... + ..++
T Consensus 322 ~dG~~~~~l~~~~--~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a 399 (677)
T 1kb0_A 322 IAGKPRKVILHAP--KNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMS 399 (677)
T ss_dssp ETTEEEEEEEECC--TTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCE
T ss_pred cCCcEeeEEEEEC--CCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCce
Confidence 367 5777777 68999999999998876542110 0 1568
Q ss_pred ECCCCCEEEEeecCcce-------------------------------------ecCCcEEEEee-cCcEEEecc-CCcE
Q psy5876 45 WDPTGRYVMSGVSLWKT-------------------------------------KADTGYWQWSF-QGKIIKRFN-SPTF 85 (143)
Q Consensus 45 wsPdG~~lat~s~~~~~-------------------------------------~~D~~i~iW~~-~g~~l~~~~-~~~v 85 (143)
++|++..+.+.+....+ ...+.+..||+ +|+.+-+.. ...+
T Consensus 400 ~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~ 479 (677)
T 1kb0_A 400 FNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPW 479 (677)
T ss_dssp EETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSC
T ss_pred EcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCC
Confidence 99999888776531000 01257889998 587765543 3345
Q ss_pred EEEEEeeCCCeeeecCchhhHH
Q psy5876 86 CQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 86 ~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
+...+.+.+..++.++.|+.++
T Consensus 480 ~~g~~~~~g~~v~~g~~dg~l~ 501 (677)
T 1kb0_A 480 NGGTLTTAGNVVFQGTADGRLV 501 (677)
T ss_dssp CCCEEEETTTEEEEECTTSEEE
T ss_pred cCcceEeCCCEEEEECCCCcEE
Confidence 5556777888888887777654
No 249
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.38 E-value=0.002 Score=50.87 Aligned_cols=87 Identities=10% Similarity=-0.006 Sum_probs=50.1
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeeccCceEEEEECCCC---CEEEEeecCcceecCCcEEEEee-cCcEE
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTG---RYVMSGVSLWKTKADTGYWQWSF-QGKII 77 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG---~~lat~s~~~~~~~D~~i~iW~~-~g~~l 77 (143)
.++|++..|++++ .+|.|..||..+++.+-++........++++++ ..+++++ .|+.+..||. +|+.+
T Consensus 125 ~~~p~~~~v~~~~--~dg~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~------~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 125 SLSPSTSLLYLGR--TEYTITMYDTKTRELRWNATYFDYAASLPEDDVDYKMSHFVSN------GDGLVVTVDSESGDVL 196 (369)
T ss_dssp --------EEEEE--EEEEEECCCSSSSSCCCEEEEEEECCBCCCCCTTCCCCEEEEE------TSCEEEEECTTTCCEE
T ss_pred cccccCCEEEEEe--cCCEEEEEECCCCCEEEeEecccccCccccCCccccceEEEEC------CCCEEEEEECCCCcEE
Confidence 3578888888887 479999999998876544432222334445542 3455566 4889999999 68877
Q ss_pred Eecc-CCcE-EEEEEeeCCCe
Q psy5876 78 KRFN-SPTF-CQLRWRPRPAS 96 (143)
Q Consensus 78 ~~~~-~~~v-~~l~wsP~~~~ 96 (143)
-+.. ..++ ....++++|..
T Consensus 197 W~~~~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 197 WIQNYASPVVAFYVWQREGLR 217 (369)
T ss_dssp EEEECSSCEEEEEECTTSSCE
T ss_pred EEecCCCceEEEEEecCCceE
Confidence 6543 3344 34455666653
No 250
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.34 E-value=0.069 Score=41.16 Aligned_cols=91 Identities=14% Similarity=0.147 Sum_probs=57.7
Q ss_pred CeEecCCCEEEEEecCCCCeE-EEEEC--CCceEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSL-EFVDT--GDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKI 76 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i-~iWd~--~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~ 76 (143)
+.++|+|++++.+. +|.+ +-+|- .+.+.+.......+..++++|+|+.++.+. ++.+++.+.+ |+.
T Consensus 168 ~~~~~~~~~~~~g~---~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~-------~G~~~~s~~D~G~t 237 (327)
T 2xbg_A 168 LNRSPSGEYVAVSS---RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVN-------GGKIAFSDPDNSEN 237 (327)
T ss_dssp EEECTTSCEEEEET---TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEET-------TTEEEEEETTEEEE
T ss_pred EEEcCCCcEEEEEC---CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeC-------CceEEEecCCCCCe
Confidence 35788998887764 4544 33453 355555444446789999999999776654 4555555433 433
Q ss_pred EEecc------CCcEEEEEEeeCCCeeeecC
Q psy5876 77 IKRFN------SPTFCQLRWRPRPASLLSKE 101 (143)
Q Consensus 77 l~~~~------~~~v~~l~wsP~~~~l~s~s 101 (143)
-.... ...+.++++.|++..++.+.
T Consensus 238 W~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 238 WGELLSPLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp ECCCBCTTSSCCSCEEEEEESSSSCEEEEES
T ss_pred eEeccCCcccCCcceEEEEecCCCEEEEEeC
Confidence 22221 23589999999888777654
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.21 E-value=0.021 Score=43.91 Aligned_cols=92 Identities=9% Similarity=0.038 Sum_probs=61.9
Q ss_pred EecCCCEEEEEecCCCCeEEEEECCCceEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEEEecc
Q psy5876 3 LRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKRFN 81 (143)
Q Consensus 3 ~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l~~~~ 81 (143)
..++|+.|-.... .++.+.++|..+++.+.+++... .....++||+.|..+. .++.+.++|.. .+.+.+..
T Consensus 92 it~~g~~ly~ltw-~~~~v~v~D~~t~~~~~ti~~~~-eG~glt~dg~~L~~Sd------Gs~~i~~iDp~T~~v~~~I~ 163 (262)
T 3nol_A 92 ISDWKDKIVGLTW-KNGLGFVWNIRNLRQVRSFNYDG-EGWGLTHNDQYLIMSD------GTPVLRFLDPESLTPVRTIT 163 (262)
T ss_dssp EEEETTEEEEEES-SSSEEEEEETTTCCEEEEEECSS-CCCCEEECSSCEEECC------SSSEEEEECTTTCSEEEEEE
T ss_pred EEEeCCEEEEEEe-eCCEEEEEECccCcEEEEEECCC-CceEEecCCCEEEEEC------CCCeEEEEcCCCCeEEEEEE
Confidence 3567777777766 58999999999999988875322 2233446787776655 36778899985 56665532
Q ss_pred -------CCcEEEEEEeeCCCeeeecCch
Q psy5876 82 -------SPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 82 -------~~~v~~l~wsP~~~~l~s~s~d 103 (143)
...++.+.|. +|...+..-++
T Consensus 164 V~~~g~~~~~lNELe~~-~G~lyan~w~~ 191 (262)
T 3nol_A 164 VTAHGEELPELNELEWV-DGEIFANVWQT 191 (262)
T ss_dssp CEETTEECCCEEEEEEE-TTEEEEEETTS
T ss_pred eccCCccccccceeEEE-CCEEEEEEccC
Confidence 2456778887 77655554333
No 252
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.13 E-value=0.04 Score=43.82 Aligned_cols=98 Identities=9% Similarity=0.045 Sum_probs=59.8
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceE--Eeeec------cCceEEEEECCC----CCEEEEeecCcceecCCcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSV--MNAAE------HHQATDVEWDPT----GRYVMSGVSLWKTKADTGYW 68 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~--~~~~~------~~~v~~i~wsPd----G~~lat~s~~~~~~~D~~i~ 68 (143)
|+|.|||+.+++-- ..|.|++++.++++. +.... ......|+++|| |...++-+.. .++.|.
T Consensus 37 ia~~pdG~llVter--~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~----~~~~v~ 110 (347)
T 3das_A 37 LAPLPGGDLLVSSR--DEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA----SDNRIV 110 (347)
T ss_dssp EEECTTSCEEEEET--TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS----SSEEEE
T ss_pred EEEcCCCcEEEEEe--cCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC----CCCEEE
Confidence 57899999877653 379999998665442 22221 246899999996 5555543321 234455
Q ss_pred EEeecC-----------cEEE-ecc---CCcEEEEEEeeCCCeeeecCchh
Q psy5876 69 QWSFQG-----------KIIK-RFN---SPTFCQLRWRPRPASLLSKEQVD 104 (143)
Q Consensus 69 iW~~~g-----------~~l~-~~~---~~~v~~l~wsP~~~~l~s~s~d~ 104 (143)
-|.+++ +.|. ... .+.-..|.|.|||...++.++..
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~ 161 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESG 161 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTT
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCC
Confidence 555543 1121 121 23445799999999989876543
No 253
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.93 E-value=0.043 Score=45.26 Aligned_cols=89 Identities=8% Similarity=0.046 Sum_probs=61.0
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCce------------EEeeec--------cCceEEEEECCCCC---EEEEeecC
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFS------------VMNAAE--------HHQATDVEWDPTGR---YVMSGVSL 58 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~------------~~~~~~--------~~~v~~i~wsPdG~---~lat~s~~ 58 (143)
..||+|++||..| +.+|.+-.+..+. ....+. ..+|..+.|+|-|. .|++=.
T Consensus 72 vlSpsG~lLAl~g---~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLt-- 146 (452)
T 3pbp_A 72 ISSTSGDLLCLFN---DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLK-- 146 (452)
T ss_dssp EECTTSSEEEEEC---SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEE--
T ss_pred EECCCCCEEEEec---CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEe--
Confidence 4699999999998 6789998876211 111221 24699999999654 677666
Q ss_pred cceecCCcEEEEeecC-c--E--EEec----c----CCcEEEEEEeeCCCeeee
Q psy5876 59 WKTKADTGYWQWSFQG-K--I--IKRF----N----SPTFCQLRWRPRPASLLS 99 (143)
Q Consensus 59 ~~~~~D~~i~iW~~~g-~--~--l~~~----~----~~~v~~l~wsP~~~~l~s 99 (143)
.|+.|++||+.- . . +.+. . ...|.+++|.++|-.|-.
T Consensus 147 ----sD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYv 196 (452)
T 3pbp_A 147 ----EDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYC 196 (452)
T ss_dssp ----TTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEE
T ss_pred ----cCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEE
Confidence 599999999952 2 1 2111 1 257899999998865544
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.90 E-value=0.052 Score=41.85 Aligned_cols=93 Identities=6% Similarity=-0.124 Sum_probs=63.2
Q ss_pred EecCCCEEEEEecCCCCeEEEEECCCceEEeeeccC-ceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEEEec
Q psy5876 3 LRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHH-QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKRF 80 (143)
Q Consensus 3 ~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~~-~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l~~~ 80 (143)
..++|+.|-.... .++.+.++|..+++.+.+++.. .-..++ +||+.|..+. .++.+.++|.. .+.+.+.
T Consensus 101 it~~g~~Ly~ltw-~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSd------Gs~~l~~iDp~T~~v~~~I 171 (268)
T 3nok_A 101 LASDGERLYQLTW-TEGLLFTWSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSD------GGTMLTFHEPDGFALVGAV 171 (268)
T ss_dssp EEECSSCEEEEES-SSCEEEEEETTTTEEEEEEECSSCCCCEE--EETTEEEEEC------SSSEEEEECTTTCCEEEEE
T ss_pred EEEeCCEEEEEEc-cCCEEEEEECCcCcEEEEEeCCCceeEEe--cCCCEEEEEC------CCCEEEEEcCCCCeEEEEE
Confidence 3567777777666 5899999999999998887532 112333 6788777766 47789999985 5666553
Q ss_pred c-------CCcEEEEEEeeCCCeeeecCchhh
Q psy5876 81 N-------SPTFCQLRWRPRPASLLSKEQVDK 105 (143)
Q Consensus 81 ~-------~~~v~~l~wsP~~~~l~s~s~d~~ 105 (143)
. ...++.+.|. +|...+...+...
T Consensus 172 ~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~ 202 (268)
T 3nok_A 172 QVKLRGQPVELINELECA-NGVIYANIWHSSD 202 (268)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETTCSE
T ss_pred EeCCCCcccccccccEEe-CCEEEEEECCCCe
Confidence 2 2357788888 7776665543333
No 255
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.87 E-value=0.045 Score=44.14 Aligned_cols=98 Identities=8% Similarity=0.160 Sum_probs=58.2
Q ss_pred CeEecCCCEEEEEecCCCC----eEEEEECCC-ce---EEeeeccCceEEEEECC-CCCEEEEeecCcceecCCcEEEEe
Q psy5876 1 MKLRMRGTHIVLAELRDTG----SLEFVDTGD-FS---VMNAAEHHQATDVEWDP-TGRYVMSGVSLWKTKADTGYWQWS 71 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg----~i~iWd~~~-~~---~~~~~~~~~v~~i~wsP-dG~~lat~s~~~~~~~D~~i~iW~ 71 (143)
|+|+|+|++|.++..+ ++ .+...+.+. .. .+.. ......++++| +|+.+++-. ..+.|..++
T Consensus 184 ia~d~~G~~lyvad~~-~~~~~~~v~~~~~~g~~~~~~~l~~--~~~p~giavdp~~g~lyv~d~------~~~~V~~~~ 254 (430)
T 3tc9_A 184 ICWTHEADSMIITNDQ-NNNDRPNNYILTRESGFKVITELTK--GQNCNGAETHPINGELYFNSW------NAGQVFRYD 254 (430)
T ss_dssp EEECTTSSEEEEEECC-SCTTSEEEEEEEGGGTSCSEEEEEE--CSSCCCEEECTTTCCEEEEET------TTTEEEEEE
T ss_pred EEEeCCCCEEEEEeCC-CCcccceEEEEeCCCceeeeeeecc--CCCceEEEEeCCCCEEEEEEC------CCCEEEEEE
Confidence 5789999977666531 12 233344321 11 2222 23467889999 676555544 367888899
Q ss_pred ecCcEEE---ecc-CCcEEEEEEeeCCC-eeeecCchhhHH
Q psy5876 72 FQGKIIK---RFN-SPTFCQLRWRPRPA-SLLSKEQVDKIK 107 (143)
Q Consensus 72 ~~g~~l~---~~~-~~~v~~l~wsP~~~-~l~s~s~d~~i~ 107 (143)
.++..+. ... ...-..++|+|+|. ..++......|.
T Consensus 255 ~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 255 FTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp TTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 8766442 222 23456899999999 556655554443
No 256
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.85 E-value=0.064 Score=43.27 Aligned_cols=67 Identities=10% Similarity=0.106 Sum_probs=45.5
Q ss_pred CeEec-CCCEEEEEecCCCCeEEEEECCCceE--Eeeec-cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecC
Q psy5876 1 MKLRM-RGTHIVLAELRDTGSLEFVDTGDFSV--MNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQG 74 (143)
Q Consensus 1 i~~SP-dG~~las~~~~~dg~i~iWd~~~~~~--~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g 74 (143)
++++| +|..+++ .. .++.|..+|.++.+. +.... ......++|+|+|++|..+.. ..+.|..++.+|
T Consensus 231 iavdp~~g~lyv~-d~-~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~-----~~~~I~~~~~d~ 301 (430)
T 3tc9_A 231 AETHPINGELYFN-SW-NAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV-----NQHYILRSDYDW 301 (430)
T ss_dssp EEECTTTCCEEEE-ET-TTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET-----TTTEEEEEEEET
T ss_pred EEEeCCCCEEEEE-EC-CCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC-----CCCEEEEEeCCc
Confidence 46789 5655544 44 478999999887654 22222 235789999999996665553 467888888765
No 257
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.77 E-value=0.11 Score=42.39 Aligned_cols=101 Identities=10% Similarity=0.036 Sum_probs=57.4
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCce--EEeeec--------cCceEEEEECCC----CCEEEEeecCcc-e----
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFS--VMNAAE--------HHQATDVEWDPT----GRYVMSGVSLWK-T---- 61 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~--~~~~~~--------~~~v~~i~wsPd----G~~lat~s~~~~-~---- 61 (143)
|+|.|||+++++-. ..+.|.+++..+++ .+..+. ......|+|+|| |...++-+.... .
T Consensus 32 ~a~~pdG~l~V~e~--~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~ 109 (454)
T 1cru_A 32 LLWGPDNQIWLTER--ATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKE 109 (454)
T ss_dssp EEECTTSCEEEEET--TTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CC
T ss_pred EEEcCCCcEEEEEc--CCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccc
Confidence 57899999887753 12468888765443 232221 235779999995 444444431000 0
Q ss_pred -ecCCcEEEEeecC--------cEEEe-cc---CCcEEEEEEeeCCCeeeecCch
Q psy5876 62 -KADTGYWQWSFQG--------KIIKR-FN---SPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 62 -~~D~~i~iW~~~g--------~~l~~-~~---~~~v~~l~wsP~~~~l~s~s~d 103 (143)
...+.|.-|+.++ +.+.. .. .+.-..|+|.|||...++.++.
T Consensus 110 ~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~ 164 (454)
T 1cru_A 110 LPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQ 164 (454)
T ss_dssp SCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCT
T ss_pred cccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCC
Confidence 0012444455432 11221 22 2457899999999988887654
No 258
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.71 E-value=0.054 Score=46.25 Aligned_cols=92 Identities=11% Similarity=0.153 Sum_probs=61.4
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCc------eE-------Eeeec-cCceEEEEECCCCCEEEEeecCcceecCCcE
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDF------SV-------MNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGY 67 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~------~~-------~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i 67 (143)
-.+|||+|++.++. .+.++.++|..+. ++ ....+ .......+|+++| +..|.-- .|+.+
T Consensus 329 ~vsPDGkyi~v~GK-LsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlf-----idSqv 401 (638)
T 3sbq_A 329 NTSSDGKYFIAAGK-LSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLF-----IDSQV 401 (638)
T ss_dssp EECTTSCEEEEECT-TSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEET-----TTTEE
T ss_pred eeCCCCCEEEEcCC-CCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeeee-----ecceE
Confidence 46899999999887 6899999998742 11 22222 2467899999999 4444432 69999
Q ss_pred EEEeecC-----------cEEEecc-CCcEEEEEE------eeCCCeeeec
Q psy5876 68 WQWSFQG-----------KIIKRFN-SPTFCQLRW------RPRPASLLSK 100 (143)
Q Consensus 68 ~iW~~~g-----------~~l~~~~-~~~v~~l~w------sP~~~~l~s~ 100 (143)
.-|+++. ..+.+.. ....-++.- .|+|++|++.
T Consensus 402 vkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 402 VKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp EEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred EEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence 9999852 2344433 234444444 6777777773
No 259
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.59 E-value=0.11 Score=39.46 Aligned_cols=87 Identities=5% Similarity=-0.041 Sum_probs=57.4
Q ss_pred ecCCCEEEEEecCCCCeEEEEECCCceEEeeeccC-ceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-CcEEEecc
Q psy5876 4 RMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHH-QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKRFN 81 (143)
Q Consensus 4 SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~~-~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l~~~~ 81 (143)
.++|+.|-.... .++.+.++|..+++.+.+++.. .-..++ +||+.|..+. .++.+.++|.. .+.+.+..
T Consensus 71 ~~~~~~ly~ltw-~~~~v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSd------gs~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 71 VAWRDRLIQLTW-RNHEGFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSD------GTAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp EEETTEEEEEES-SSSEEEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEEC------SSSEEEEECTTTCCEEEEEE
T ss_pred EEeCCEEEEEEe-eCCEEEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEEC------CCCeEEEEeCCCCeEEEEEE
Confidence 456677766666 5899999999999998887532 123444 5677665554 36789999984 55555432
Q ss_pred -------CCcEEEEEEeeCCCeeeec
Q psy5876 82 -------SPTFCQLRWRPRPASLLSK 100 (143)
Q Consensus 82 -------~~~v~~l~wsP~~~~l~s~ 100 (143)
...++.+.|. +|...+..
T Consensus 142 V~~~g~~~~~lNeLe~~-~G~lyanv 166 (243)
T 3mbr_X 142 VTAGGRPLDNLNELEWV-NGELLANV 166 (243)
T ss_dssp CEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred EccCCcccccceeeEEe-CCEEEEEE
Confidence 2456777776 66655544
No 260
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.41 E-value=0.076 Score=42.17 Aligned_cols=95 Identities=11% Similarity=0.125 Sum_probs=63.5
Q ss_pred ecCCCEEEEEecC-----------CCCeEEEEECC---CceEEeeec---------------cCceEEEEECCCCCEEEE
Q psy5876 4 RMRGTHIVLAELR-----------DTGSLEFVDTG---DFSVMNAAE---------------HHQATDVEWDPTGRYVMS 54 (143)
Q Consensus 4 SPdG~~las~~~~-----------~dg~i~iWd~~---~~~~~~~~~---------------~~~v~~i~wsPdG~~lat 54 (143)
-|+|+.+++...+ .+..|..+|+. +++.+.... ...+.+++..|+|+-.++
T Consensus 74 D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt 153 (334)
T 2p9w_A 74 DNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA 153 (334)
T ss_dssp SSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEE
T ss_pred CCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEe
Confidence 5888888754310 14678899988 666543211 124899999999999998
Q ss_pred eecCcceecC-CcEEEEeecCcEEEec--c------CCcEEEEEEeeCCCeeeecCchh
Q psy5876 55 GVSLWKTKAD-TGYWQWSFQGKIIKRF--N------SPTFCQLRWRPRPASLLSKEQVD 104 (143)
Q Consensus 55 ~s~~~~~~~D-~~i~iW~~~g~~l~~~--~------~~~v~~l~wsP~~~~l~s~s~d~ 104 (143)
++ .. +.|...+.+|+.+.-+ . ....+.++++|+|..|+.....+
T Consensus 154 ~s------~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g 206 (334)
T 2p9w_A 154 FA------LGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPR 206 (334)
T ss_dssp EE------ESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSS
T ss_pred CC------CCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCC
Confidence 88 34 5666666677743321 1 12477999999999888664444
No 261
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.36 E-value=0.21 Score=37.90 Aligned_cols=96 Identities=5% Similarity=0.061 Sum_probs=63.1
Q ss_pred CeEecCCCEEEEEecCCCC-eEEEEEC--CC--ceEEee------eccCceEEEEECCCCCEEEEeecCcceecCCcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTG-SLEFVDT--GD--FSVMNA------AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQ 69 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg-~i~iWd~--~~--~~~~~~------~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~i 69 (143)
|+|+|+++.|.++.. .+. .|.-|+- .+ ...+.. ......+.++++|...+|..-|+ ..+.+.+
T Consensus 126 LA~d~~~~~L~va~E-~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~-----~s~~L~~ 199 (255)
T 3qqz_A 126 LAYSRQDHTFWFFKE-KNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSH-----ESRALQE 199 (255)
T ss_dssp EEEETTTTEEEEEEE-SSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEET-----TTTEEEE
T ss_pred EEEeCCCCEEEEEEC-cCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEEC-----CCCeEEE
Confidence 589999987777663 233 4445551 11 122211 11235789999998877777775 5678888
Q ss_pred EeecCcEEEecc--C---------CcEEEEEEeeCCCeeeecCc
Q psy5876 70 WSFQGKIIKRFN--S---------PTFCQLRWRPRPASLLSKEQ 102 (143)
Q Consensus 70 W~~~g~~l~~~~--~---------~~v~~l~wsP~~~~l~s~s~ 102 (143)
+|.+|+.+.... . ..--.+++.|+|...++.+.
T Consensus 200 ~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~ 243 (255)
T 3qqz_A 200 VTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP 243 (255)
T ss_dssp ECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT
T ss_pred EcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC
Confidence 999999665432 1 25679999999998877554
No 262
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.32 E-value=0.067 Score=41.94 Aligned_cols=97 Identities=11% Similarity=0.099 Sum_probs=54.1
Q ss_pred CeEecCCC-EEEEEecCCCCeEEEEECCCceE---Eeee------ccCceEEEEECCC----CCEEEEeecCccee--cC
Q psy5876 1 MKLRMRGT-HIVLAELRDTGSLEFVDTGDFSV---MNAA------EHHQATDVEWDPT----GRYVMSGVSLWKTK--AD 64 (143)
Q Consensus 1 i~~SPdG~-~las~~~~~dg~i~iWd~~~~~~---~~~~------~~~~v~~i~wsPd----G~~lat~s~~~~~~--~D 64 (143)
|+|.|||+ ++++ . ..|.|++++.+. +. +... .......++++|| |...++-+.. ... ..
T Consensus 23 i~~~pdG~~l~V~-e--~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~-~~~g~~~ 97 (353)
T 2g8s_A 23 LAFLPDNHGMLIT-L--RGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEV-GDDGKAG 97 (353)
T ss_dssp EEECSTTCCEEEE-E--TTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEE-CSSSCEE
T ss_pred EEEcCCCCEEEEE-e--CCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCC-CCCCCce
Confidence 57899999 5554 4 369999998543 22 1111 1135789999996 5444443310 000 01
Q ss_pred CcEEEEeecCc--------EEE-ecc-----CCcEEEEEEeeCCCeeeecCc
Q psy5876 65 TGYWQWSFQGK--------IIK-RFN-----SPTFCQLRWRPRPASLLSKEQ 102 (143)
Q Consensus 65 ~~i~iW~~~g~--------~l~-~~~-----~~~v~~l~wsP~~~~l~s~s~ 102 (143)
+.|..|++++. .+. ... .+.-..++|.|||...++.++
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 24555555321 111 111 122467999999988887654
No 263
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.03 E-value=0.28 Score=39.58 Aligned_cols=66 Identities=9% Similarity=0.191 Sum_probs=42.6
Q ss_pred CeEec-CCCEEEEEecCCCCeEEEEECCCceEEe---eec-cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec
Q psy5876 1 MKLRM-RGTHIVLAELRDTGSLEFVDTGDFSVMN---AAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ 73 (143)
Q Consensus 1 i~~SP-dG~~las~~~~~dg~i~iWd~~~~~~~~---~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~ 73 (143)
++++| +|+..++- . .++.|+.+|.++++... ... ......++|+|+|++|..+.. ..+.|..++++
T Consensus 233 iavd~~~G~lyv~d-~-~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~-----~~~~I~~~~~d 303 (433)
T 4hw6_A 233 CAVHPQNGKIYYTR-Y-HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN-----GKHCIYRVDYN 303 (433)
T ss_dssp CEECTTTCCEEECB-T-TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET-----TTTEEEEEEBC
T ss_pred EEEeCCCCeEEEEE-C-CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC-----CCCEEEEEeCC
Confidence 46788 66655443 3 47889999988665422 211 123457999999996665553 45677777765
No 264
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=94.83 E-value=0.4 Score=38.67 Aligned_cols=100 Identities=5% Similarity=0.019 Sum_probs=64.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECC--Cce-----EEeee-c-------------cCceEEEEE---------CCCCC
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTG--DFS-----VMNAA-E-------------HHQATDVEW---------DPTGR 50 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~--~~~-----~~~~~-~-------------~~~v~~i~w---------sPdG~ 50 (143)
|+|+|+|++|..+.. ..+.|+.++.+ +++ .+... . ......+++ .++|.
T Consensus 278 ia~dpdG~~LYvad~-~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~ 356 (433)
T 4hw6_A 278 IVWHPTGDWAYIIYN-GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD 356 (433)
T ss_dssp EEECTTSSEEEEEET-TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE
T ss_pred EEEeCCCCEEEEEeC-CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc
Confidence 579999997766654 36789887755 221 11110 0 123678999 88888
Q ss_pred EEEEeecCcceecCCcEEEEeecCcEEEecc-------------------CCcEEEEEEe-eCCCeeeecCchhhHH
Q psy5876 51 YVMSGVSLWKTKADTGYWQWSFQGKIIKRFN-------------------SPTFCQLRWR-PRPASLLSKEQVDKIK 107 (143)
Q Consensus 51 ~lat~s~~~~~~~D~~i~iW~~~g~~l~~~~-------------------~~~v~~l~ws-P~~~~l~s~s~d~~i~ 107 (143)
.+++-. ..+.|+.++.+|....... ...-..+++. ++|..+++......||
T Consensus 357 lyvaD~------~n~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr 427 (433)
T 4hw6_A 357 FYFCDR------DSHTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVR 427 (433)
T ss_dssp EEEEET------TTTEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEE
T ss_pred EEEEEC------CCCEEEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEE
Confidence 777655 4667888888775432211 1235689999 7888888776655554
No 265
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.70 E-value=0.053 Score=46.42 Aligned_cols=97 Identities=8% Similarity=0.072 Sum_probs=64.1
Q ss_pred EEEEEecCCCCeEEEEECCCceEEeeeccC-----------------------------------------ceEEEEECC
Q psy5876 9 HIVLAELRDTGSLEFVDTGDFSVMNAAEHH-----------------------------------------QATDVEWDP 47 (143)
Q Consensus 9 ~las~~~~~dg~i~iWd~~~~~~~~~~~~~-----------------------------------------~v~~i~wsP 47 (143)
.|+.++ .+|.+.++|..+++++...+.. .-..++++|
T Consensus 321 ~v~~~~--~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp 398 (689)
T 1yiq_A 321 VLMQAP--KNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP 398 (689)
T ss_dssp EEEECC--TTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET
T ss_pred EEEEEC--CCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC
Confidence 677776 5899999999999887432100 011278999
Q ss_pred CCCEEEEeecCcce--------------------e-------------------cCCcEEEEee-cCcEEEecc-CCcEE
Q psy5876 48 TGRYVMSGVSLWKT--------------------K-------------------ADTGYWQWSF-QGKIIKRFN-SPTFC 86 (143)
Q Consensus 48 dG~~lat~s~~~~~--------------------~-------------------~D~~i~iW~~-~g~~l~~~~-~~~v~ 86 (143)
+.+.+.+.+....+ . .++.+..||+ +|+.+-+.. .....
T Consensus 399 ~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~ 478 (689)
T 1yiq_A 399 DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFN 478 (689)
T ss_dssp TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCC
T ss_pred CCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCcc
Confidence 99888776532100 0 1367889999 588776543 33344
Q ss_pred EEEEeeCCCeeeecCchhhHH
Q psy5876 87 QLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 87 ~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.-.+.+.+..++.++.|+.++
T Consensus 479 ~g~~~tagglvf~gt~dg~l~ 499 (689)
T 1yiq_A 479 GGTLSTAGNLVFEGSADGRVI 499 (689)
T ss_dssp CCEEEETTTEEEEECTTSEEE
T ss_pred CccceECCCEEEEECCCCcEE
Confidence 446677888888888887765
No 266
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.68 E-value=0.65 Score=36.85 Aligned_cols=93 Identities=9% Similarity=0.055 Sum_probs=54.8
Q ss_pred eEecCCCEEEEEecC---------------CCCeEEEEECCCceEEeeeccCceEEEEECCCCCEEEEeecCcceecCCc
Q psy5876 2 KLRMRGTHIVLAELR---------------DTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTG 66 (143)
Q Consensus 2 ~~SPdG~~las~~~~---------------~dg~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~ 66 (143)
...|+|++.++.... ..|.|.-+|..+.+.+.. .-...+.++|||||++|..+.+ ..+.
T Consensus 171 ~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~-~l~~pNGia~spDg~~lYvadt-----~~~~ 244 (355)
T 3sre_A 171 VAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAE-GFDFANGINISPDGKYVYIAEL-----LAHK 244 (355)
T ss_dssp EEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEE-EESSEEEEEECTTSSEEEEEEG-----GGTE
T ss_pred EEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEeec-CCcccCcceECCCCCEEEEEeC-----CCCe
Confidence 456888877765310 124555566543333322 1245789999999998887775 4677
Q ss_pred EEEEeec--CcEEEe--cc-CCcEEEEEEee-CCCeeeec
Q psy5876 67 YWQWSFQ--GKIIKR--FN-SPTFCQLRWRP-RPASLLSK 100 (143)
Q Consensus 67 i~iW~~~--g~~l~~--~~-~~~v~~l~wsP-~~~~l~s~ 100 (143)
|..|+++ |.+-.. +. ...--.++..+ +|...+++
T Consensus 245 I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 245 IHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp EEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred EEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEe
Confidence 8888884 443211 11 22344566777 47766644
No 267
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.67 E-value=0.32 Score=37.31 Aligned_cols=94 Identities=11% Similarity=0.105 Sum_probs=57.5
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeee--c----cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-C
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAA--E----HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-G 74 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~--~----~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g 74 (143)
.++|+|+.++.+. +|.+.+.+.+.++.-... . ...+..+++.|+++.++++. ++.+ .++.+ |
T Consensus 211 ~~~~~g~~~~~~~---~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-------~g~i-~~S~DgG 279 (327)
T 2xbg_A 211 GFTPDGRLWMIVN---GGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-------AGAL-LCSQDGG 279 (327)
T ss_dssp EECTTSCEEEEET---TTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-------TTCE-EEESSTT
T ss_pred EECCCCCEEEEeC---CceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-------CCeE-EEeCCCC
Confidence 4678888776653 688877754434432221 1 23588999999999888766 4455 45555 4
Q ss_pred cEEEecc-----CCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 75 KIIKRFN-----SPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 75 ~~l~~~~-----~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
+.-.... ...++++.|.+++. ++.++.++.|.
T Consensus 280 ~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~ 316 (327)
T 2xbg_A 280 QTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILL 316 (327)
T ss_dssp SSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEE
T ss_pred cccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEE
Confidence 3222111 34688899986665 55555666553
No 268
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.58 E-value=0.34 Score=40.81 Aligned_cols=95 Identities=7% Similarity=0.007 Sum_probs=61.8
Q ss_pred eEec-CCCEEEEEecCCC---------CeEEEEECCCce--EEeee---ccCceEEEEECCCCCEEEEeecCcceecCCc
Q psy5876 2 KLRM-RGTHIVLAELRDT---------GSLEFVDTGDFS--VMNAA---EHHQATDVEWDPTGRYVMSGVSLWKTKADTG 66 (143)
Q Consensus 2 ~~SP-dG~~las~~~~~d---------g~i~iWd~~~~~--~~~~~---~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~ 66 (143)
++.| +|+.++.||.+.+ ..+.+||..+.+ .+... ....+..+++.++|+.++.|+. .++.
T Consensus 192 av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~-----~~~~ 266 (656)
T 1k3i_A 192 AIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGN-----DAKK 266 (656)
T ss_dssp EEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSS-----STTC
T ss_pred EEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCC-----CCCc
Confidence 4567 8999999885311 168899977643 22222 1223567889999999999985 3557
Q ss_pred EEEEeecCcEEEe---ccCCc-EEEEEEeeCCCeeeecC
Q psy5876 67 YWQWSFQGKIIKR---FNSPT-FCQLRWRPRPASLLSKE 101 (143)
Q Consensus 67 i~iW~~~g~~l~~---~~~~~-v~~l~wsP~~~~l~s~s 101 (143)
+.+||.....-.. .+..+ -..++.-|+|+.++.|+
T Consensus 267 v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG 305 (656)
T 1k3i_A 267 TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGG 305 (656)
T ss_dssp EEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECC
T ss_pred eEEecCcCCceeECCCCCccccccceEEecCCeEEEEeC
Confidence 9999985432222 22222 23456668999999988
No 269
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.41 E-value=0.22 Score=39.06 Aligned_cols=62 Identities=8% Similarity=0.152 Sum_probs=36.6
Q ss_pred ceEEEEECCCCCEEEEeecCcce-------ecCCcEEEEeecCc----------EEEeccCCcEEEEEEee-CCCeeeec
Q psy5876 39 QATDVEWDPTGRYVMSGVSLWKT-------KADTGYWQWSFQGK----------IIKRFNSPTFCQLRWRP-RPASLLSK 100 (143)
Q Consensus 39 ~v~~i~wsPdG~~lat~s~~~~~-------~~D~~i~iW~~~g~----------~l~~~~~~~v~~l~wsP-~~~~l~s~ 100 (143)
....++|+|||+.+++-++.... ...+.|.-.+.+|+ .+.......-+.++|.| +|...++.
T Consensus 136 ~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 136 NGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATE 215 (354)
T ss_dssp CCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEE
T ss_pred CCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEe
Confidence 45789999999977775431100 01234555566665 23333334456899999 67766654
No 270
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.39 E-value=0.34 Score=36.62 Aligned_cols=93 Identities=11% Similarity=-0.016 Sum_probs=58.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCC-------c--eEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEe
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGD-------F--SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWS 71 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~-------~--~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~ 71 (143)
++|+|||..-++ . +|.+.-.+..+ + ..+-.........+.|.|+|.+.++ + |+.|+-++
T Consensus 46 laf~P~G~LYaV-~---~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~-------dG~iyr~~ 113 (236)
T 1tl2_A 46 LFLSPGGELYGV-L---NDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-S-------KDKLYKAS 113 (236)
T ss_dssp EEECTTSCEEEE-E---TTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-E-------TTEEEEES
T ss_pred EEECCCccEEEE-e---CCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-C-------CCEEEEeC
Confidence 579999998888 4 57765555433 1 1222112233578999999998888 6 56666665
Q ss_pred e--cC--------cEEEeccCCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 72 F--QG--------KIIKRFNSPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 72 ~--~g--------~~l~~~~~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
. ++ ..+-...-..+..|.+.|+|..-+-. ++.+.
T Consensus 114 pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 114 PPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp CCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 5 22 22222122468999999999866655 44443
No 271
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=94.22 E-value=1.2 Score=33.96 Aligned_cols=91 Identities=10% Similarity=-0.019 Sum_probs=56.0
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCC----ce--EEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecC
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGD----FS--VMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQG 74 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~----~~--~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g 74 (143)
+.|+|+++.|..+.. .++.|..++.+. .. .+..........+++++.++.|..+.. ..+.|.+.+.+|
T Consensus 35 ~~~d~~~~~ly~~D~-~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~-----~~~~I~~~~~~g 108 (316)
T 1ijq_A 35 LDTEVASNRIYWSDL-SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS-----VLGTVSVADTKG 108 (316)
T ss_dssp EEEETTTTEEEEEET-TTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET-----TTTEEEEEETTS
T ss_pred EEEEeCCCEEEEEEC-CCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEEC-----CCCEEEEEeCCC
Confidence 468888777766654 468899998775 11 111111235678999987665554432 467899999988
Q ss_pred cEEEec---cCCcEEEEEEeeCCCee
Q psy5876 75 KIIKRF---NSPTFCQLRWRPRPASL 97 (143)
Q Consensus 75 ~~l~~~---~~~~v~~l~wsP~~~~l 97 (143)
+..... ....-..++..|.+..|
T Consensus 109 ~~~~~~~~~~~~~P~~iavdp~~g~l 134 (316)
T 1ijq_A 109 VKRKTLFRENGSKPRAIVVDPVHGFM 134 (316)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEE
T ss_pred CceEEEEECCCCCcceEEeCCCCCEE
Confidence 643322 23466788888865544
No 272
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.22 E-value=0.15 Score=42.64 Aligned_cols=77 Identities=12% Similarity=0.013 Sum_probs=49.3
Q ss_pred CCeEEEEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEEEecc-CCcE--EEEEEee
Q psy5876 18 TGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRFN-SPTF--CQLRWRP 92 (143)
Q Consensus 18 dg~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l~~~~-~~~v--~~l~wsP 92 (143)
+|.|..||..+++.+-+.+. ..+........|..+..++ .|+.++.||. +|+++.+.. ...+ ..+.+.+
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~------~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~ 516 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYAT------LDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSF 516 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEEC------TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEc------CCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEE
Confidence 47899999999887765532 2222222333455666676 5899999998 699887654 2211 2344678
Q ss_pred CCCeeeec
Q psy5876 93 RPASLLSK 100 (143)
Q Consensus 93 ~~~~l~s~ 100 (143)
+|+.++..
T Consensus 517 ~G~~yv~~ 524 (571)
T 2ad6_A 517 KGKQYIGS 524 (571)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEE
Confidence 99866643
No 273
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.11 E-value=1.4 Score=34.18 Aligned_cols=99 Identities=8% Similarity=-0.034 Sum_probs=57.9
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCce--EEeeeccCceEEEEECCCCCEEEEeecCcceecC-CcEEEEeecCcEEE
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFS--VMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKAD-TGYWQWSFQGKIIK 78 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~--~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D-~~i~iW~~~g~~l~ 78 (143)
++.|.+..|..+.. ..+.|.+.+.+... .+..........++++|++.+|..... .. +.|...+.+|....
T Consensus 122 avd~~~g~ly~~d~-~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~-----~~~~~I~r~~~dG~~~~ 195 (349)
T 3v64_C 122 AVDWVHDKLYWTDS-GTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDW-----GNTPRIEASSMDGSGRR 195 (349)
T ss_dssp EEETTTTEEEEEET-TTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEEC-----SSSCEEEEEETTSCSCE
T ss_pred EEecCCCeEEEEcC-CCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEecc-----CCCCEEEEEeCCCCCcE
Confidence 45565555544433 35678888876422 222222245789999997776655442 23 67888888886544
Q ss_pred ec---cCCcEEEEEEeeCCCee-eecCchhhH
Q psy5876 79 RF---NSPTFCQLRWRPRPASL-LSKEQVDKI 106 (143)
Q Consensus 79 ~~---~~~~v~~l~wsP~~~~l-~s~s~d~~i 106 (143)
.. ....-..++|.|++..| ++.+....|
T Consensus 196 ~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I 227 (349)
T 3v64_C 196 IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 227 (349)
T ss_dssp ESCCSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEECCCCCcceEEEeCCCCEEEEEECCCCEE
Confidence 33 23356789999876654 444433333
No 274
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=94.10 E-value=1.4 Score=33.41 Aligned_cols=97 Identities=10% Similarity=0.043 Sum_probs=57.9
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCce--EEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEEe
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFS--VMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 79 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~--~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~~ 79 (143)
++.|.++.|..+.. ..+.|.+.|.+... .+..........++.+|++++|..+... ..+.|...+.+|.....
T Consensus 83 avd~~~~~ly~~d~-~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~----~~~~I~~~~~dG~~~~~ 157 (316)
T 1ijq_A 83 AVDWIHSNIYWTDS-VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYS 157 (316)
T ss_dssp EEETTTTEEEEEET-TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS----SSCEEEEEETTSCCEEE
T ss_pred EEeecCCeEEEEEC-CCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccC----CCCeEEEEcCCCCCeEE
Confidence 45665555544433 36788888876432 2222223467899999977755544420 12577778888875443
Q ss_pred c---cCCcEEEEEEeeCCCeee-ecCch
Q psy5876 80 F---NSPTFCQLRWRPRPASLL-SKEQV 103 (143)
Q Consensus 80 ~---~~~~v~~l~wsP~~~~l~-s~s~d 103 (143)
. ....-..++|.|++..|. +.+..
T Consensus 158 ~~~~~~~~P~gla~d~~~~~lY~~D~~~ 185 (316)
T 1ijq_A 158 LVTENIQWPNGITLDLLSGRLYWVDSKL 185 (316)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred EEECCCCCceEEEEeccCCEEEEEECCC
Confidence 2 234567899998876554 44433
No 275
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=93.98 E-value=0.68 Score=36.68 Aligned_cols=101 Identities=12% Similarity=0.093 Sum_probs=66.4
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEe-eecc--------CceEEEEE---CCCCCEEEEeec--Cc-----cee
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMN-AAEH--------HQATDVEW---DPTGRYVMSGVS--LW-----KTK 62 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~-~~~~--------~~v~~i~w---sPdG~~lat~s~--~~-----~~~ 62 (143)
.|.+.+..+..+++ -.|+|..||...+.... .++. ..++.+.| .|+|+++++... .+ +..
T Consensus 19 ~wd~~~g~~~vs~l-~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~ 97 (334)
T 2p9w_A 19 IYDRTRQVFYQSNL-YKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSH 97 (334)
T ss_dssp EEETTTTEEEEEET-TTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSS
T ss_pred cCcCCCCEEEEEec-cCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccC
Confidence 68776666666665 47999999987543222 3322 13689999 799998886431 00 112
Q ss_pred cCCcEEEEeec----CcEEEecc-----C----------CcEEEEEEeeCCCeeeecCch
Q psy5876 63 ADTGYWQWSFQ----GKIIKRFN-----S----------PTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 63 ~D~~i~iW~~~----g~~l~~~~-----~----------~~v~~l~wsP~~~~l~s~s~d 103 (143)
.++.+..+|+. |+.+.... . ....+++.-|+|...++++.-
T Consensus 98 g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~ 157 (334)
T 2p9w_A 98 GASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG 157 (334)
T ss_dssp SCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES
T ss_pred CCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC
Confidence 36778889987 66554321 1 248899999999988876644
No 276
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=93.73 E-value=0.19 Score=41.80 Aligned_cols=68 Identities=12% Similarity=0.169 Sum_probs=44.3
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECC-------CceE--------------Eeeec-cCceEEEEECCCCCEEEEeecC
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTG-------DFSV--------------MNAAE-HHQATDVEWDPTGRYVMSGVSL 58 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~-------~~~~--------------~~~~~-~~~v~~i~wsPdG~~lat~s~~ 58 (143)
++.+|++.+|..+.. .++.|..+|.+ +++. +.+.. ....+.|+|+|+|++|..+..
T Consensus 252 iavdp~~g~LYvtd~-~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~- 329 (496)
T 3kya_A 252 ATIHPINGELYFNSY-EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVI- 329 (496)
T ss_dssp EEECTTTCCEEEEET-TTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEET-
T ss_pred EEEcCCCCeEEEEEC-CCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeC-
Confidence 356886666666655 47889999976 4432 22222 234689999999996555543
Q ss_pred cceecCCcEEEEeecC
Q psy5876 59 WKTKADTGYWQWSFQG 74 (143)
Q Consensus 59 ~~~~~D~~i~iW~~~g 74 (143)
..+.|+.++++|
T Consensus 330 ----~~h~I~kid~dg 341 (496)
T 3kya_A 330 ----NNHYFMRSDYDE 341 (496)
T ss_dssp ----TTTEEEEEEEET
T ss_pred ----CCCEEEEEecCC
Confidence 356777777654
No 277
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=93.71 E-value=0.38 Score=35.66 Aligned_cols=94 Identities=14% Similarity=0.031 Sum_probs=57.1
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEEe
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 79 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~~ 79 (143)
...++|+..+. + .++.+..+|. +++.+.... ...+..+...++|+..+ ++ .++++..+|.+|+.+..
T Consensus 221 ~~~~~g~l~v~-t--~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t------~~ggl~~~d~~g~~~~~ 289 (330)
T 3hxj_A 221 AISEDGTIYVT-S--LDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYF-GS------YDGHLYAINPDGTEKWN 289 (330)
T ss_dssp EECTTSCEEEE-E--TTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEE-EC------TTCEEEEECTTSCEEEE
T ss_pred EECCCCeEEEE-c--CCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEE-ec------CCCCEEEECCCCcEEEE
Confidence 45677765554 3 3577777875 344443332 22344566777887554 44 36789999988887665
Q ss_pred cc--CCcEEEEEEeeCCCeeeecCchhhHH
Q psy5876 80 FN--SPTFCQLRWRPRPASLLSKEQVDKIK 107 (143)
Q Consensus 80 ~~--~~~v~~l~wsP~~~~l~s~s~d~~i~ 107 (143)
.. ...+.++...++|...+ ++.++.++
T Consensus 290 ~~~~~~~~~~~~~d~~g~l~~-gt~~G~~~ 318 (330)
T 3hxj_A 290 FETGSWIIATPVIDENGTIYF-GTRNGKFY 318 (330)
T ss_dssp EECSSCCCSCCEECTTCCEEE-ECTTSCEE
T ss_pred EEcCCccccceEEcCCCEEEE-EcCCCeEE
Confidence 43 44566666667887555 55555553
No 278
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.59 E-value=0.85 Score=37.36 Aligned_cols=102 Identities=10% Similarity=0.090 Sum_probs=56.9
Q ss_pred CeEecCCC-EEEEEecCCCCeEEEEECCCce---EEee----ec-------cCceEEEEECCC----CCEEEEeecCcce
Q psy5876 1 MKLRMRGT-HIVLAELRDTGSLEFVDTGDFS---VMNA----AE-------HHQATDVEWDPT----GRYVMSGVSLWKT 61 (143)
Q Consensus 1 i~~SPdG~-~las~~~~~dg~i~iWd~~~~~---~~~~----~~-------~~~v~~i~wsPd----G~~lat~s~~~~~ 61 (143)
|+|.|||+ .|.++. ..|.|++++.+... .+.. +. ......|+++|+ |...++-+....-
T Consensus 19 ~a~~pdG~~rl~V~e--r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~ 96 (463)
T 2wg3_C 19 ALHSGDGSQRLFILE--KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQER 96 (463)
T ss_dssp EECCSSSSCCEEEEE--TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCS
T ss_pred EEECCCCCeEEEEEe--CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCC
Confidence 47889996 344444 47999999754211 1111 11 235789999997 6655555421000
Q ss_pred ----ecC--CcEEEEeecC-----------cEEEec----cCCcEEEEEEeeCCCeeeecCchh
Q psy5876 62 ----KAD--TGYWQWSFQG-----------KIIKRF----NSPTFCQLRWRPRPASLLSKEQVD 104 (143)
Q Consensus 62 ----~~D--~~i~iW~~~g-----------~~l~~~----~~~~v~~l~wsP~~~~l~s~s~d~ 104 (143)
..+ +.|.-|.++. +.|... ..+.-..|+|.|||...++.++..
T Consensus 97 ~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 97 WAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp SCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred cccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 000 1222244321 122222 134578999999999999877654
No 279
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=93.42 E-value=2 Score=33.75 Aligned_cols=99 Identities=8% Similarity=-0.034 Sum_probs=56.2
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCce--EEeeeccCceEEEEECCCCCEEEEeecCcceecC-CcEEEEeecCcEEE
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFS--VMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKAD-TGYWQWSFQGKIIK 78 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~--~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D-~~i~iW~~~g~~l~ 78 (143)
++.|.+..|..+.. ..+.|.+.+.+... .+..........++.+|++.+|..+.. .. +.|...+.+|....
T Consensus 165 avd~~~g~lY~~d~-~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~-----~~~~~I~r~~~dG~~~~ 238 (386)
T 3v65_B 165 AVDWVHDKLYWTDS-GTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDW-----GNTPRIEASSMDGSGRR 238 (386)
T ss_dssp EEETTTTEEEEEET-TTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEEC-----SSSCEEEEEETTSCSCE
T ss_pred EEEeCCCeEEEEcC-CCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEecc-----CCCCEEEEEeCCCCCcE
Confidence 45555555444433 24567776665322 222212246789999998776655442 23 67778888876433
Q ss_pred ec---cCCcEEEEEEeeCCCee-eecCchhhH
Q psy5876 79 RF---NSPTFCQLRWRPRPASL-LSKEQVDKI 106 (143)
Q Consensus 79 ~~---~~~~v~~l~wsP~~~~l-~s~s~d~~i 106 (143)
.. ....-..++|.|++..| ++.+....|
T Consensus 239 ~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I 270 (386)
T 3v65_B 239 IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 270 (386)
T ss_dssp EEECSSCSCEEEEEEEGGGTEEEEEETTTTEE
T ss_pred EEEECCCCCeeeEEEeCCCCEEEEEECCCCEE
Confidence 32 23346789999876654 444433333
No 280
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.37 E-value=0.24 Score=39.37 Aligned_cols=55 Identities=15% Similarity=0.309 Sum_probs=38.6
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECC-CceE--Eeeec-cCceEEEEECC-CCCEEEEee
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTG-DFSV--MNAAE-HHQATDVEWDP-TGRYVMSGV 56 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~-~~~~--~~~~~-~~~v~~i~wsP-dG~~lat~s 56 (143)
|+|||||++|..+.. ..+.|..|+++ +++. ...+. ....-.++.++ +|++.+++.
T Consensus 226 ia~spDg~~lYvadt-~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 226 INISPDGKYVYIAEL-LAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEECTTSSEEEEEEG-GGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEE
T ss_pred ceECCCCCEEEEEeC-CCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEec
Confidence 589999998888765 36789999975 3322 11222 24567899999 599887665
No 281
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=93.03 E-value=1.9 Score=33.85 Aligned_cols=92 Identities=8% Similarity=0.003 Sum_probs=56.7
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceEEeee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 78 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~ 78 (143)
++|.|.++.|..+.. ..+.|..++.+........ .......++++|.++.|..+.. ..+.|.+.+.+|....
T Consensus 121 l~~d~~~~~ly~~D~-~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~-----~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 121 LDFHHRRELVFWSDV-TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS-----GTSRIEVANLDGAHRK 194 (386)
T ss_dssp EEEETTTTEEEEEET-TTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEET-----TTTEEEECBTTSCSCE
T ss_pred EEEecCCCeEEEEeC-CCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcC-----CCCeEEEEeCCCCceE
Confidence 467877776666654 4678888887754322211 2235678899987666554442 3567888888776332
Q ss_pred e---ccCCcEEEEEEeeCCCeee
Q psy5876 79 R---FNSPTFCQLRWRPRPASLL 98 (143)
Q Consensus 79 ~---~~~~~v~~l~wsP~~~~l~ 98 (143)
. .....-..+++.|.+..|.
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly 217 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIY 217 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEE
T ss_pred EeecCCCCCCcEEEEEcCCCeEE
Confidence 2 1234567888888655433
No 282
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=92.97 E-value=0.51 Score=36.77 Aligned_cols=99 Identities=11% Similarity=0.137 Sum_probs=53.1
Q ss_pred CeEecC---CCEEEEEecCCC-----CeEEEEECCCc-----eEEee-ec-----cCceEEEEECCCCCEEEEeecCcc-
Q psy5876 1 MKLRMR---GTHIVLAELRDT-----GSLEFVDTGDF-----SVMNA-AE-----HHQATDVEWDPTGRYVMSGVSLWK- 60 (143)
Q Consensus 1 i~~SPd---G~~las~~~~~d-----g~i~iWd~~~~-----~~~~~-~~-----~~~v~~i~wsPdG~~lat~s~~~~- 60 (143)
|+|+|| +.+|-++.. .+ +.|..++.+.. +.+.. .+ .+....++|+|||..+++-+....
T Consensus 80 ia~~pdf~~~g~lYv~~~-~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~ 158 (352)
T 2ism_A 80 LALHPRFPQEPYVYAYRT-VAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYER 158 (352)
T ss_dssp EEECTTTTTSCEEEEEEE-ECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCG
T ss_pred EEECCCCCCCCEEEEEEe-cCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCC
Confidence 578998 555544432 12 56777776532 22222 22 123478999999987776542110
Q ss_pred -e-----ecCCcEEEEeecCcE---------------EEeccCCcEEEEEEee-CCCeeeec
Q psy5876 61 -T-----KADTGYWQWSFQGKI---------------IKRFNSPTFCQLRWRP-RPASLLSK 100 (143)
Q Consensus 61 -~-----~~D~~i~iW~~~g~~---------------l~~~~~~~v~~l~wsP-~~~~l~s~ 100 (143)
. ...+.|.-++.+|.. +.......-+.++|.| +|...++.
T Consensus 159 ~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d 220 (352)
T 2ism_A 159 ELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSE 220 (352)
T ss_dssp GGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEE
T ss_pred ccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEE
Confidence 0 011345555666621 2222233467789999 66655554
No 283
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.94 E-value=0.23 Score=41.75 Aligned_cols=76 Identities=18% Similarity=0.249 Sum_probs=48.8
Q ss_pred CCeEEEEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEEEecc-CCcE--EEEEEee
Q psy5876 18 TGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRFN-SPTF--CQLRWRP 92 (143)
Q Consensus 18 dg~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l~~~~-~~~v--~~l~wsP 92 (143)
+|.|.-||..+++.+-+... .++..-.....|..++.++ .|+.++.||. +|+++-+.. ...+ .-+.|..
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~------~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~ 538 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGT------GDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQ 538 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEEC------TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEEC------CCCcEEEEECCCCCEEEEecCCCCcccCceEEEE
Confidence 57899999999987655432 2222111222456666677 5899999999 699887654 2222 2366778
Q ss_pred CCCeeee
Q psy5876 93 RPASLLS 99 (143)
Q Consensus 93 ~~~~l~s 99 (143)
+|+..+.
T Consensus 539 ~G~qYv~ 545 (582)
T 1flg_A 539 DGEQYLG 545 (582)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 9975554
No 284
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=92.92 E-value=2.5 Score=32.63 Aligned_cols=95 Identities=6% Similarity=-0.040 Sum_probs=58.1
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCce--EEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFS--VMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 78 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~--~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~ 78 (143)
++|+|.++.|..+.. ..+.|..++.+... .+..........++++|.++.|..+.. ..+.|.+.+.+|....
T Consensus 78 l~~d~~~~~ly~~D~-~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~-----~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 78 LDFHHRRELVFWSDV-TLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS-----GTSRIEVANLDGAHRK 151 (349)
T ss_dssp EEEETTTTEEEEEET-TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCE
T ss_pred EEEeccccEEEEEec-cCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcC-----CCCeEEEEcCCCCceE
Confidence 367777666666554 36788888876543 222212235678999987665544442 4678889998876432
Q ss_pred e---ccCCcEEEEEEeeCCC-eeeecC
Q psy5876 79 R---FNSPTFCQLRWRPRPA-SLLSKE 101 (143)
Q Consensus 79 ~---~~~~~v~~l~wsP~~~-~l~s~s 101 (143)
. .....-..+++.|.+. ..++..
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~ 178 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDW 178 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEEC
T ss_pred EEEeCCCCCcceEEEecCcCeEEEecc
Confidence 2 1234567889998554 444543
No 285
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.82 E-value=1.1 Score=36.49 Aligned_cols=63 Identities=14% Similarity=0.100 Sum_probs=38.9
Q ss_pred CceEEEEECCCCCEEEEeecCcce--------------------------ecCCcEEEEeecCc-------------EEE
Q psy5876 38 HQATDVEWDPTGRYVMSGVSLWKT--------------------------KADTGYWQWSFQGK-------------IIK 78 (143)
Q Consensus 38 ~~v~~i~wsPdG~~lat~s~~~~~--------------------------~~D~~i~iW~~~g~-------------~l~ 78 (143)
+....|+|+|||+++++.++.... ..-+.|.-.+.+|. .+.
T Consensus 144 H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~ 223 (454)
T 1cru_A 144 HQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIY 223 (454)
T ss_dssp CCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEE
T ss_pred CCCCeEeECCCCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEE
Confidence 457899999999977765532100 00123433455665 233
Q ss_pred eccCCcEEEEEEeeCCCeeeec
Q psy5876 79 RFNSPTFCQLRWRPRPASLLSK 100 (143)
Q Consensus 79 ~~~~~~v~~l~wsP~~~~l~s~ 100 (143)
.........++|.|+|...++.
T Consensus 224 a~G~RNp~gla~dp~G~L~~~d 245 (454)
T 1cru_A 224 TLGHRNPQGLAFTPNGKLLQSE 245 (454)
T ss_dssp EBCCSEEEEEEECTTSCEEEEE
T ss_pred EECCCCcceEEECCCCCEEEEe
Confidence 3345678899999998866653
No 286
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=92.77 E-value=1.9 Score=34.34 Aligned_cols=91 Identities=16% Similarity=0.222 Sum_probs=60.2
Q ss_pred ecC-CC-EEEEEecCCCCeEEEEECC-------CceEEeeecc-CceEEEEECCCCCEEEEeecCcceecCCcEEEEeec
Q psy5876 4 RMR-GT-HIVLAELRDTGSLEFVDTG-------DFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ 73 (143)
Q Consensus 4 SPd-G~-~las~~~~~dg~i~iWd~~-------~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~ 73 (143)
+|+ |+ |+.+.+ .+|.+..|++. +.+++.+++. ..+-.|..+|...+|..+- .+.+|..++..
T Consensus 138 ~~~~g~~yafV~~--k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~e------Ed~GIw~~da~ 209 (355)
T 3amr_A 138 SQKTGKYYAMVTG--KEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAE------EDEAIWKFSAE 209 (355)
T ss_dssp CTTTCCEEEEEEC--SSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEE------TTTEEEEEECS
T ss_pred cCCCCcEEEEEEC--CCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEec------ccceEEEEeCC
Confidence 674 54 455555 57999999972 3456666653 4688999999988998888 56676555643
Q ss_pred ------CcEEEecc----CCcEEEEEE--eeCCC-eeeecCc
Q psy5876 74 ------GKIIKRFN----SPTFCQLRW--RPRPA-SLLSKEQ 102 (143)
Q Consensus 74 ------g~~l~~~~----~~~v~~l~w--sP~~~-~l~s~s~ 102 (143)
++++.... ...+-.|+. .++++ +|+..++
T Consensus 210 p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ 251 (355)
T 3amr_A 210 PDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ 251 (355)
T ss_dssp TTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG
T ss_pred cCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC
Confidence 34555442 246778887 56666 5665554
No 287
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=92.63 E-value=0.5 Score=38.94 Aligned_cols=93 Identities=14% Similarity=0.223 Sum_probs=58.5
Q ss_pred cCCCEEEEEecCCCCeEEEEECCC---ceEEeeec--cC-ceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-Cc--
Q psy5876 5 MRGTHIVLAELRDTGSLEFVDTGD---FSVMNAAE--HH-QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-GK-- 75 (143)
Q Consensus 5 PdG~~las~~~~~dg~i~iWd~~~---~~~~~~~~--~~-~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-g~-- 75 (143)
-+|+.|+.+- ++.||.-++.. .+.+.... .. .+..+..||+|++||..+ +.+|.|-.+- +.
T Consensus 30 ~n~t~i~~a~---~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-------~~~V~Vv~LP~~~~~ 99 (452)
T 3pbp_A 30 QNGTRIVFIQ---DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-------DNEIFVMEVPWGYSN 99 (452)
T ss_dssp TTTTEEEEEE---TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-------SSEEEEEECCTTCSC
T ss_pred cCCCEEEEEE---CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-------CCeEEEEEecCcccc
Confidence 4556666654 56777777652 33333321 13 688899999999999988 4455553331 11
Q ss_pred ----------EEEec--------cCCcEEEEEEeeCCC---eeeecCchhhHH
Q psy5876 76 ----------IIKRF--------NSPTFCQLRWRPRPA---SLLSKEQVDKIK 107 (143)
Q Consensus 76 ----------~l~~~--------~~~~v~~l~wsP~~~---~l~s~s~d~~i~ 107 (143)
..+.+ ...+|..+.|||.+. .|+.-..|.+||
T Consensus 100 ~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir 152 (452)
T 3pbp_A 100 VEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTIT 152 (452)
T ss_dssp CCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEE
T ss_pred CcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEE
Confidence 11111 145799999999874 688777777776
No 288
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=92.60 E-value=3.1 Score=32.84 Aligned_cols=94 Identities=9% Similarity=-0.023 Sum_probs=56.2
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCc------eEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecC
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDF------SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQG 74 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~------~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g 74 (143)
|+|+|.++.|..+.. ..+.|+.++.+.. +.+..........+++++.++.|..+.. ..+.|.+.+.+|
T Consensus 117 l~~d~~~~~lywsD~-~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~-----~~~~I~~~~~~g 190 (400)
T 3p5b_L 117 LDTEVASNRIYWSDL-SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS-----VLGTVSVADTKG 190 (400)
T ss_dssp EEEETTTTEEEEEET-TTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEET-----TTTEEEEECTTT
T ss_pred EeeeeccCceEEEec-CCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEEC-----CCCeEEEEeCCC
Confidence 467887776666654 3677888887641 1222212246789999996665554442 467888888888
Q ss_pred cEEEec---cCCcEEEEEEeeCCC-eeeec
Q psy5876 75 KIIKRF---NSPTFCQLRWRPRPA-SLLSK 100 (143)
Q Consensus 75 ~~l~~~---~~~~v~~l~wsP~~~-~l~s~ 100 (143)
+..... ....-..++..|.+. ..++.
T Consensus 191 ~~~~~l~~~~~~~P~~iavdp~~g~ly~td 220 (400)
T 3p5b_L 191 VKRKTLFRENGSKPRAIVVDPVHGFMYWTD 220 (400)
T ss_dssp CSEEEEEECSSCCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEeCCCCCcceEEEecccCeEEEEe
Confidence 744322 234567888888544 33443
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=92.46 E-value=0.68 Score=38.49 Aligned_cols=97 Identities=8% Similarity=0.028 Sum_probs=58.7
Q ss_pred ecCCCEEEEEecCCCC------eEEEEECCC-c--------eEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEE
Q psy5876 4 RMRGTHIVLAELRDTG------SLEFVDTGD-F--------SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYW 68 (143)
Q Consensus 4 SPdG~~las~~~~~dg------~i~iWd~~~-~--------~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~ 68 (143)
+|+|++|.++.. .++ .|.+.+... + ..+..+ .....++.+|++++|..+.. .++.|.
T Consensus 201 d~~G~~lyvad~-~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~--~~p~giavdp~~g~LYvtd~-----~~g~V~ 272 (496)
T 3kya_A 201 ADEAEYMIVAID-YDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY--KQCNGATIHPINGELYFNSY-----EKGQVF 272 (496)
T ss_dssp BCTTCEEEEEEC-CCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE--SCCCCEEECTTTCCEEEEET-----TTTEEE
T ss_pred CCCCCEEEEEeC-CCCCcccCceEEEEecCCCCceeecccceeeccC--CCceEEEEcCCCCeEEEEEC-----CCCEEE
Confidence 999997777763 221 255665333 1 222222 34567889996665555442 466788
Q ss_pred EEeec-------Cc-E--------------EEecc-CCcEEEEEEeeCCC-eeeecCchhhHHh
Q psy5876 69 QWSFQ-------GK-I--------------IKRFN-SPTFCQLRWRPRPA-SLLSKEQVDKIKK 108 (143)
Q Consensus 69 iW~~~-------g~-~--------------l~~~~-~~~v~~l~wsP~~~-~l~s~s~d~~i~~ 108 (143)
.+|++ +. . +.... ...-+.++|+|+|. ..++......|++
T Consensus 273 r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~k 336 (496)
T 3kya_A 273 RLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMR 336 (496)
T ss_dssp EECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEE
Confidence 99986 22 2 22222 23457899999999 4677666666664
No 290
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=92.37 E-value=2.3 Score=32.58 Aligned_cols=100 Identities=12% Similarity=0.037 Sum_probs=55.6
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCc--eEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEEe
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDF--SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 79 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~--~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~~ 79 (143)
++.|.+..|..+.. ..+.|.+.+.+.. +.+..........++.+|.+.+|..+... ..+.|...+.+|.....
T Consensus 85 avd~~~g~ly~~d~-~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~----~~~~I~r~~~dG~~~~~ 159 (318)
T 3sov_A 85 ACDWLGEKLYWTDS-ETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWG----EVPKIERAGMDGSSRFI 159 (318)
T ss_dssp EEETTTTEEEEEET-TTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECS----SSCEEEEEETTSCSCEE
T ss_pred EEEcCCCeEEEEEC-CCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecC----CCCEEEEEEcCCCCeEE
Confidence 44554444444332 3567777776642 22222223467899999987665544410 24567777888764332
Q ss_pred c---cCCcEEEEEEeeCCCee-eecCchhhH
Q psy5876 80 F---NSPTFCQLRWRPRPASL-LSKEQVDKI 106 (143)
Q Consensus 80 ~---~~~~v~~l~wsP~~~~l-~s~s~d~~i 106 (143)
. ....-+.++|.|++..| ++.+....|
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I 190 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFI 190 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEECCCCCccEEEEeccCCEEEEEECCCCEE
Confidence 2 23345789999866544 454444333
No 291
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=91.85 E-value=0.62 Score=34.47 Aligned_cols=83 Identities=11% Similarity=0.025 Sum_probs=49.4
Q ss_pred CEEEEEecCCCCeEEEEECCCceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEEecc--CC
Q psy5876 8 THIVLAELRDTGSLEFVDTGDFSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRFN--SP 83 (143)
Q Consensus 8 ~~las~~~~~dg~i~iWd~~~~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~~~~--~~ 83 (143)
..|.+++ .+|.|..+|.. ++...... ...+.++...++|+.++ ++ .++++..+|.+|+.+.... ..
T Consensus 108 ~~l~v~t--~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~v-gt------~~~~l~~~d~~g~~~~~~~~~~~ 177 (330)
T 3hxj_A 108 DILYVTS--MDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYV-GS------NDNYLYAINPDGTEKWRFKTNDA 177 (330)
T ss_dssp TEEEEEC--TTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEE-EC------TTSEEEEECTTSCEEEEEECSSC
T ss_pred CEEEEEe--cCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEE-Ec------CCCEEEEECCCCCEeEEEecCCC
Confidence 3455555 37889999988 65544432 23456677888888555 44 2567778877766554332 33
Q ss_pred cEEEEEEeeCCCeeeec
Q psy5876 84 TFCQLRWRPRPASLLSK 100 (143)
Q Consensus 84 ~v~~l~wsP~~~~l~s~ 100 (143)
.+.++...+++...+..
T Consensus 178 ~~~~~~~d~~g~l~v~t 194 (330)
T 3hxj_A 178 ITSAASIGKDGTIYFGS 194 (330)
T ss_dssp CCSCCEECTTCCEEEES
T ss_pred ceeeeEEcCCCEEEEEe
Confidence 44455555566544443
No 292
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=91.60 E-value=0.43 Score=39.87 Aligned_cols=29 Identities=14% Similarity=0.209 Sum_probs=21.3
Q ss_pred cCCC---EEEEEecCCCCeEEEEECCCceEEeee
Q psy5876 5 MRGT---HIVLAELRDTGSLEFVDTGDFSVMNAA 35 (143)
Q Consensus 5 PdG~---~las~~~~~dg~i~iWd~~~~~~~~~~ 35 (143)
++|+ .++.++ .+|.+...|..+++.+-..
T Consensus 311 ~~G~~~~~v~~~~--~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 311 VNGKMTPLLSHID--RNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp ETTEEEEEEEEEC--TTSEEEEEETTTCCEEEEE
T ss_pred cCCcEEEEEEEeC--CCcEEEEEECCCCCEEeee
Confidence 4674 455666 5899999999998876543
No 293
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=91.03 E-value=4.2 Score=31.10 Aligned_cols=92 Identities=8% Similarity=0.007 Sum_probs=53.3
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCce---EEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFS---VMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 78 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~---~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~ 78 (143)
.|.|.++.|.-+.. ..+.|..++.+... .+..........+++++.++.|..+.. ..+.|.+.+.+|....
T Consensus 41 d~d~~~~~lyw~D~-~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~-----~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 41 DFVFSHGLIYWSDV-SEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDS-----ETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEGGGTEEEEEET-TTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCE
T ss_pred EEEeCCCEEEEEEC-CCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEEC-----CCCEEEEEECCCCcEE
Confidence 56776555555544 35677777766431 222222235678999986665544432 4678889999876332
Q ss_pred e---ccCCcEEEEEEeeCCC-eeee
Q psy5876 79 R---FNSPTFCQLRWRPRPA-SLLS 99 (143)
Q Consensus 79 ~---~~~~~v~~l~wsP~~~-~l~s 99 (143)
. .....-..+++.|.+. ...+
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~t 139 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWT 139 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEE
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEE
Confidence 2 2234557788887543 3344
No 294
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=90.67 E-value=1.3 Score=33.93 Aligned_cols=86 Identities=8% Similarity=0.037 Sum_probs=44.8
Q ss_pred eEecCCCEEEEEe--cCCCCeEEEEECCCc--eEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEE
Q psy5876 2 KLRMRGTHIVLAE--LRDTGSLEFVDTGDF--SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII 77 (143)
Q Consensus 2 ~~SPdG~~las~~--~~~dg~i~iWd~~~~--~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l 77 (143)
.|+|+|++|+-+. ...+..|..-+++.. +.+... .+ .+|+|+|+.|.-.+. ....|..-+++|...
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~---~~--~~~~~~g~~iy~t~~-----g~~~Iy~~~l~g~~~ 179 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNH---YL--FTCNTSDRYFYYNNP-----KNGQLYRYDTASQSE 179 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESS---CC--CCSEEETTEEEEECT-----TTCCEEEEETTTTEE
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCC---Cc--eEeeEECCEEEEEeC-----CCceEEEEECCCCCE
Confidence 5889999998765 112345555555532 223221 22 457888998875553 244555556655432
Q ss_pred EeccCCcEEEEEEeeCCCeee
Q psy5876 78 KRFNSPTFCQLRWRPRPASLL 98 (143)
Q Consensus 78 ~~~~~~~v~~l~wsP~~~~l~ 98 (143)
......... ..+.|++..|+
T Consensus 180 ~~l~~~~~~-~~~~P~g~~iy 199 (302)
T 3s25_A 180 ALFYDCNCY-KPVVLDDTNVY 199 (302)
T ss_dssp EEEECSCEE-EEEEEETTEEE
T ss_pred EEEeCCCcc-ceeeecCCEEE
Confidence 222222222 23446666555
No 295
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=90.63 E-value=0.92 Score=38.52 Aligned_cols=75 Identities=13% Similarity=0.161 Sum_probs=50.5
Q ss_pred CCeEEEEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEEEecc-CCcE--EEEEEee
Q psy5876 18 TGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRFN-SPTF--CQLRWRP 92 (143)
Q Consensus 18 dg~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l~~~~-~~~v--~~l~wsP 92 (143)
+|.|.-||..+++.+-+.+. ...........|.+++.++ .|+.++.||. +|+.+.+.. ...+ .-+.+..
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~------~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~ 510 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGT------AAGQMHAYSADKGEALWQFEAQSGIVAAPMTFEL 510 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC------TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEEC------CcccchhhhhhcChhheEecCCCCcccCceEEEE
Confidence 37899999999988765432 3344445666788888887 6999999999 588887653 1111 2344456
Q ss_pred CCCeee
Q psy5876 93 RPASLL 98 (143)
Q Consensus 93 ~~~~l~ 98 (143)
+|+..+
T Consensus 511 ~G~~yv 516 (668)
T 1kv9_A 511 AGRQYV 516 (668)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 776443
No 296
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.43 E-value=2.9 Score=33.01 Aligned_cols=63 Identities=11% Similarity=0.168 Sum_probs=37.5
Q ss_pred CceEEEEECCCCCEEEEeecCcce-------ecCCcEEEEeecCc----------EEEeccCCcEEEEEEeeCCCeeeec
Q psy5876 38 HQATDVEWDPTGRYVMSGVSLWKT-------KADTGYWQWSFQGK----------IIKRFNSPTFCQLRWRPRPASLLSK 100 (143)
Q Consensus 38 ~~v~~i~wsPdG~~lat~s~~~~~-------~~D~~i~iW~~~g~----------~l~~~~~~~v~~l~wsP~~~~l~s~ 100 (143)
+....|+|.|||.++++.++.... ..-+.|.-.+.+|. .+..........++|.|+|...++.
T Consensus 140 H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 140 HNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp CCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEE
T ss_pred ccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEe
Confidence 456789999999977776531100 01233433444554 2333334456789999998866654
No 297
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=89.74 E-value=0.84 Score=35.11 Aligned_cols=90 Identities=8% Similarity=0.047 Sum_probs=49.0
Q ss_pred eEecCCCEEEEEecCC------------CCeEEEEECCCceEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEE
Q psy5876 2 KLRMRGTHIVLAELRD------------TGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQ 69 (143)
Q Consensus 2 ~~SPdG~~las~~~~~------------dg~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~i 69 (143)
.|+|+|++|.=+..+. +..|+..+++..+... ..... ...|+|+|++|+-..... .....|+.
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~~~--~~~~s~~g~~Iy~~~~~~--~~~~~Iy~ 133 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDPDP--CIYASLIGNYIYYLHYDT--QTATSLYR 133 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EECSC--EEEEEEETTEEEEEEESS--SSCEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eecCC--ccEEEEeCCEEEEEeecC--CCCceEEE
Confidence 3689999998876421 2356666666543211 11111 237899999988665100 02334555
Q ss_pred EeecCcEEEeccCCcEEEEEEeeCCCeee
Q psy5876 70 WSFQGKIIKRFNSPTFCQLRWRPRPASLL 98 (143)
Q Consensus 70 W~~~g~~l~~~~~~~v~~l~wsP~~~~l~ 98 (143)
-+++|....+.....+ .+|+|+++.|.
T Consensus 134 ~~~dGs~~~~lt~~~~--~~~~~~g~~iy 160 (302)
T 3s25_A 134 IRIDGEEKKKIKNHYL--FTCNTSDRYFY 160 (302)
T ss_dssp EETTSCCCEEEESSCC--CCSEEETTEEE
T ss_pred EECCCCCeEEEeCCCc--eEeeEECCEEE
Confidence 5556754433322222 45677777776
No 298
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=89.41 E-value=1.1 Score=38.16 Aligned_cols=57 Identities=11% Similarity=0.247 Sum_probs=36.0
Q ss_pred CeEecCCCEEEEEecC----------CCCeEEEEECCCceE--Eeeec-cCceEEEEECCCCCEEEEeec
Q psy5876 1 MKLRMRGTHIVLAELR----------DTGSLEFVDTGDFSV--MNAAE-HHQATDVEWDPTGRYVMSGVS 57 (143)
Q Consensus 1 i~~SPdG~~las~~~~----------~dg~i~iWd~~~~~~--~~~~~-~~~v~~i~wsPdG~~lat~s~ 57 (143)
|.|+|+|++++.-.-+ .+..+...+..++++ +.+.+ ...++.++|+|||++|....+
T Consensus 481 L~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred eEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEE
Confidence 5799999966553210 012344455555553 33333 357999999999999888765
No 299
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=89.33 E-value=6.2 Score=34.47 Aligned_cols=94 Identities=9% Similarity=-0.033 Sum_probs=56.0
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCc------eEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecC
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDF------SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQG 74 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~------~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g 74 (143)
|+|.+.+..|..+.. ..+.|+.++++.. +.+..........|++++.|+.|..+.. ..+.|.+.+++|
T Consensus 429 l~~d~~~~~lY~sD~-~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~-----~~~~I~v~~ldG 502 (791)
T 3m0c_C 429 LDTEVASNRIYWSDL-SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS-----VLGTVSVADTKG 502 (791)
T ss_dssp EEEETTTTEEEEEET-TTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET-----TTTEEEEEETTS
T ss_pred EeecccCCeeEEeec-cceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEec-----CCCeEEEEeCCC
Confidence 356675555555544 3567777776632 1222112245678999998877666553 467888999988
Q ss_pred cEEEec---cCCcEEEEEEeeCC-Ceeeec
Q psy5876 75 KIIKRF---NSPTFCQLRWRPRP-ASLLSK 100 (143)
Q Consensus 75 ~~l~~~---~~~~v~~l~wsP~~-~~l~s~ 100 (143)
+....+ ....-..|++.|.. ...++.
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD 532 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTD 532 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEec
Confidence 754332 23456788888864 444443
No 300
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=88.55 E-value=7.9 Score=32.95 Aligned_cols=89 Identities=10% Similarity=0.031 Sum_probs=57.0
Q ss_pred ecCCCEEEEEecCCCCeEEEEECCCceEEee----------eccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec
Q psy5876 4 RMRGTHIVLAELRDTGSLEFVDTGDFSVMNA----------AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ 73 (143)
Q Consensus 4 SPdG~~las~~~~~dg~i~iWd~~~~~~~~~----------~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~ 73 (143)
.++|+.-+ |+ .++-|..||..+++.... .....|.+++.+++|+.|-.|+ .++++.+++.+
T Consensus 365 d~~g~lWi-Gt--~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt------~~~Gl~~~d~~ 435 (795)
T 4a2l_A 365 DKDKNLWI-GT--NDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGT------HAGGLSILHRN 435 (795)
T ss_dssp CTTSCEEE-EE--SSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEE------TTTEEEEEETT
T ss_pred CCCCCEEE-EE--CCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEe------CcCceeEEeCC
Confidence 45665444 44 255688899876543221 1234689999999999445555 36789999986
Q ss_pred CcEEEec-------cCCcEEEEEEeeCCCeeeecC
Q psy5876 74 GKIIKRF-------NSPTFCQLRWRPRPASLLSKE 101 (143)
Q Consensus 74 g~~l~~~-------~~~~v~~l~wsP~~~~l~s~s 101 (143)
+..+... ....|.++...++|...+...
T Consensus 436 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~ 470 (795)
T 4a2l_A 436 SGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL 470 (795)
T ss_dssp TCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES
T ss_pred CCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec
Confidence 4333322 235799999888888666543
No 301
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=88.34 E-value=1.7 Score=33.81 Aligned_cols=60 Identities=15% Similarity=0.082 Sum_probs=34.8
Q ss_pred eEEEEECCCCCEEEEeecCcc-------eecCCcEEEEeecCc---------------EEEeccCCcEEEEEEee-CCCe
Q psy5876 40 ATDVEWDPTGRYVMSGVSLWK-------TKADTGYWQWSFQGK---------------IIKRFNSPTFCQLRWRP-RPAS 96 (143)
Q Consensus 40 v~~i~wsPdG~~lat~s~~~~-------~~~D~~i~iW~~~g~---------------~l~~~~~~~v~~l~wsP-~~~~ 96 (143)
...++|+|||.++++-++... ....+.|.-.+.+|. .+........+.++|.| +|..
T Consensus 132 ~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l 211 (353)
T 2g8s_A 132 GGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNAL 211 (353)
T ss_dssp CCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEE
T ss_pred CccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCE
Confidence 467999999986666542100 001234555566664 12222345678999999 6665
Q ss_pred eee
Q psy5876 97 LLS 99 (143)
Q Consensus 97 l~s 99 (143)
.++
T Consensus 212 ~~~ 214 (353)
T 2g8s_A 212 WLN 214 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=88.22 E-value=7.6 Score=32.70 Aligned_cols=93 Identities=8% Similarity=-0.005 Sum_probs=55.7
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCc---eEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDF---SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII 77 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~---~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l 77 (143)
|+|+|+++.|..+.. ..+.|..++.+.. +.+..........++.++.++.|..+.. ..+.|.+.+.+|...
T Consensus 45 ld~~~~~~~ly~sD~-~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~-----~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 45 VDFVFSHGLIYWSDV-SEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDS-----ETNRIEVSNLDGSLR 118 (619)
T ss_dssp EEEETTTTEEEEEET-TTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCSC
T ss_pred EEEEeCCCEEEEEEC-CCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeC-----CCCEEEEEECCCCCE
Confidence 467887777776665 3677888887643 2222222246889999997776666553 467888999988643
Q ss_pred Ee---ccCCcEEEEEEeeC-CCeeee
Q psy5876 78 KR---FNSPTFCQLRWRPR-PASLLS 99 (143)
Q Consensus 78 ~~---~~~~~v~~l~wsP~-~~~l~s 99 (143)
.. .....-..+++.|. |...+|
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~t 144 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWT 144 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEe
Confidence 22 12233446666665 333344
No 303
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=88.06 E-value=1.8 Score=36.58 Aligned_cols=75 Identities=9% Similarity=0.064 Sum_probs=46.1
Q ss_pred CCeEEEEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEEEecc-CC--cEEEEEEee
Q psy5876 18 TGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRFN-SP--TFCQLRWRP 92 (143)
Q Consensus 18 dg~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l~~~~-~~--~v~~l~wsP 92 (143)
+|.|.-||..+++.+-+.+. .+...-.....|..+..++ .|+.++.||. +|+++-+.. .. ...-+.|..
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt------~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~ 525 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGT------LDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTH 525 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEEC------TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred cCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEEC------CCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEe
Confidence 37888899998887655432 1221111223455666676 5899999998 699887653 11 123356677
Q ss_pred CCCeee
Q psy5876 93 RPASLL 98 (143)
Q Consensus 93 ~~~~l~ 98 (143)
+|+..+
T Consensus 526 ~G~qyv 531 (599)
T 1w6s_A 526 KGTQYV 531 (599)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 887544
No 304
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=87.56 E-value=1.3 Score=37.10 Aligned_cols=29 Identities=24% Similarity=0.236 Sum_probs=22.0
Q ss_pred cCCC---EEEEEecCCCCeEEEEECCCceEEeee
Q psy5876 5 MRGT---HIVLAELRDTGSLEFVDTGDFSVMNAA 35 (143)
Q Consensus 5 PdG~---~las~~~~~dg~i~iWd~~~~~~~~~~ 35 (143)
.+|+ .|+.++ .+|.+..+|..+++.+-..
T Consensus 331 ~~G~~~~~v~~~~--~~G~l~~lD~~tG~~lw~~ 362 (582)
T 1flg_A 331 KDGKIVKATAHAD--RNGFFYVVDRSNGKLQNAF 362 (582)
T ss_dssp SSSCEEEEEEEEC--TTSEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEEEEC--CCceEEEEECCCCCEeccc
Confidence 4675 566676 5899999999998877543
No 305
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=86.79 E-value=14 Score=31.45 Aligned_cols=88 Identities=10% Similarity=0.121 Sum_probs=57.7
Q ss_pred ecCCCEEEEEecCCCCeEEEEECCCceEEee------eccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEE
Q psy5876 4 RMRGTHIVLAELRDTGSLEFVDTGDFSVMNA------AEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII 77 (143)
Q Consensus 4 SPdG~~las~~~~~dg~i~iWd~~~~~~~~~------~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l 77 (143)
.++|+.|-+|+ .++-|..+|..+++...- .....|.++..+++|+..+... +++.+|+......
T Consensus 414 d~~g~~lWigt--~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~ 483 (795)
T 4a2l_A 414 DEKKSLVYIGT--HAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--------SALVRFNPEQRSF 483 (795)
T ss_dssp ETTTTEEEEEE--TTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--------SCEEEEETTTTEE
T ss_pred cCCCCEEEEEe--CcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--------CceeEEeCCCCeE
Confidence 46777455565 246788999887654322 1234689999999998655432 4788898864433
Q ss_pred Eecc---------CCcEEEEEEeeCCCeeeecC
Q psy5876 78 KRFN---------SPTFCQLRWRPRPASLLSKE 101 (143)
Q Consensus 78 ~~~~---------~~~v~~l~wsP~~~~l~s~s 101 (143)
.... ...|.++...++|...+...
T Consensus 484 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~ 516 (795)
T 4a2l_A 484 TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE 516 (795)
T ss_dssp EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES
T ss_pred EEccccccccccCCceEEEEEECCCCCEEEEeC
Confidence 3221 25689999998998766544
No 306
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=86.63 E-value=16 Score=31.95 Aligned_cols=93 Identities=11% Similarity=0.036 Sum_probs=55.5
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCceE--EeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDFSV--MNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 78 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~~~--~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~ 78 (143)
|++.+.|+.|..+.. ..+.|++.+++.... +..........|+.+|.+.+|.-+... ..+.|...+++|....
T Consensus 476 LAvD~~~~~LY~tD~-~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g----~~~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDS-VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIY 550 (791)
T ss_dssp EEEETTTTEEEEEET-TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS----SSCEEEEEETTSCCEE
T ss_pred eeeeecCCcEEEEec-CCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCC----CCCeEEEEecCCCceE
Confidence 355666666655544 367788888764322 222223458899999986655544310 2256777888887544
Q ss_pred ec---cCCcEEEEEEeeCCCeee
Q psy5876 79 RF---NSPTFCQLRWRPRPASLL 98 (143)
Q Consensus 79 ~~---~~~~v~~l~wsP~~~~l~ 98 (143)
.. ....-..|++.|....|.
T Consensus 551 ~lv~~~l~~P~GLavD~~~~~LY 573 (791)
T 3m0c_C 551 SLVTENIQWPNGITLDLLSGRLY 573 (791)
T ss_dssp EEECSSCSCEEEEEEETTTTEEE
T ss_pred EEEeCCCCCceEEEEecCCCeEE
Confidence 33 234567888887665544
No 307
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=85.23 E-value=1.1 Score=38.43 Aligned_cols=94 Identities=9% Similarity=-0.065 Sum_probs=55.3
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCC----ceEEeeec--cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecC
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGD----FSVMNAAE--HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQG 74 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~----~~~~~~~~--~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g 74 (143)
|+|+|+++.|..+.. ..+.|+.++++. ........ ......|++++.++.|..+.. ..+.|.+.+.+|
T Consensus 411 la~d~~~~~Ly~sD~-~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~-----~~~~I~v~d~dg 484 (699)
T 1n7d_A 411 LDTEVASNRIYWSDL-SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS-----VLGTVSVADTKG 484 (699)
T ss_dssp CEEETTTTEEEECCT-TTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCT-----TTSCEEEEBSSS
T ss_pred EccccccCeEEEEec-CCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEec-----cCCeEEEEecCC
Confidence 578888887777654 367888888764 11111111 123567888876554444332 467899999988
Q ss_pred cEEEecc---CCcEEEEEEeeCCC-eeeec
Q psy5876 75 KIIKRFN---SPTFCQLRWRPRPA-SLLSK 100 (143)
Q Consensus 75 ~~l~~~~---~~~v~~l~wsP~~~-~l~s~ 100 (143)
..+.... ...-..+++.|.+. +.++.
T Consensus 485 ~~~~~l~~~~~~~P~giavDp~~g~ly~td 514 (699)
T 1n7d_A 485 VKRKTLFREQGSKPRAIVVDPVHGFMYWTD 514 (699)
T ss_dssp CCEEEECCCSSCCCCCEECCSSSSCCEECC
T ss_pred CceEEEEeCCCCCcceEEEccCCCcEEEcc
Confidence 7544321 23445677887543 34443
No 308
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=84.82 E-value=0.67 Score=39.74 Aligned_cols=98 Identities=10% Similarity=0.025 Sum_probs=52.6
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeee--ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEEe
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAA--EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 79 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~--~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~~ 79 (143)
++.+.++.|..+.. ..+.|.+.+.+........ .......|+++|++.+|..+... ..+.|...+++|.....
T Consensus 459 avD~~~g~LY~tD~-~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~----~~~~I~~~~~dG~~~~~ 533 (699)
T 1n7d_A 459 AVDWIHSNIYWTDS-VLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYS 533 (699)
T ss_dssp ECCCSSSBCEECCT-TTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCS----SSCCEEBCCSSSCCCCE
T ss_pred EEEeeCCcEEEEec-cCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccC----CCCeEEEEeCCCCCeeE
Confidence 34444444433332 3577888887654322222 12356789999976655443310 12577777777764332
Q ss_pred c---cCCcEEEEEEeeCCCee-eecCchh
Q psy5876 80 F---NSPTFCQLRWRPRPASL-LSKEQVD 104 (143)
Q Consensus 80 ~---~~~~v~~l~wsP~~~~l-~s~s~d~ 104 (143)
. ....-..|+|.|++..| ++.+...
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD~~~~ 562 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVDSKLH 562 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEETTTT
T ss_pred EEeCCCCCccEEEEeccCCEEEEEecCCC
Confidence 2 12334578899876544 4444333
No 309
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=84.80 E-value=5.6 Score=30.15 Aligned_cols=64 Identities=11% Similarity=0.118 Sum_probs=37.7
Q ss_pred CCCEEEEEecCCCCeEEEEECCCceEEeeecc-----------CceEEEEECCCCCEEEEeecCcceecCCcEEEEee-c
Q psy5876 6 RGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-----------HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-Q 73 (143)
Q Consensus 6 dG~~las~~~~~dg~i~iWd~~~~~~~~~~~~-----------~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~ 73 (143)
++..|.+++ .+|.|..+|..+++.+-+.+. ..+.. ....++..+..++ .++.+..+|. +
T Consensus 52 ~~~~v~~~~--~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~------~~g~l~a~d~~t 122 (376)
T 3q7m_A 52 ADNVVYAAD--RAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGS------EKAQVYALNTSD 122 (376)
T ss_dssp ETTEEEEEC--TTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEE------TTSEEEEEETTT
T ss_pred ECCEEEEEc--CCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEc------CCCEEEEEECCC
Confidence 345666666 478999999998887654322 11221 1222344555565 3667777776 4
Q ss_pred CcEEE
Q psy5876 74 GKIIK 78 (143)
Q Consensus 74 g~~l~ 78 (143)
|+.+-
T Consensus 123 G~~~W 127 (376)
T 3q7m_A 123 GTVAW 127 (376)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 66554
No 310
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=83.95 E-value=3.5 Score=34.54 Aligned_cols=71 Identities=14% Similarity=-0.017 Sum_probs=44.8
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCce--EEeeeccC-ceEEEEECCCCCEEEEeecCcceecCCcEEEEeec
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFS--VMNAAEHH-QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ 73 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~--~~~~~~~~-~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~ 73 (143)
++.++|+.++.||. .++.+++||..+.+ .+...+.. .-.+++..|||+.++.|+.......-+.+.+||..
T Consensus 249 ~~~~~g~lyv~GG~-~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 249 SMDGNGQIVVTGGN-DAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp EECTTSCEEEECSS-STTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred cCCCCCCEEEeCCC-CCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 45689999999996 35689999977644 22222222 12345667899999998831110012467778774
No 311
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=82.80 E-value=16 Score=28.96 Aligned_cols=91 Identities=14% Similarity=0.228 Sum_probs=54.7
Q ss_pred EEEEecCC--CCeEEEEECC--CceEEeee--------cc-CceEEEEE--CCC-CCEEEEeecCcceecCCcEEEEeec
Q psy5876 10 IVLAELRD--TGSLEFVDTG--DFSVMNAA--------EH-HQATDVEW--DPT-GRYVMSGVSLWKTKADTGYWQWSFQ 73 (143)
Q Consensus 10 las~~~~~--dg~i~iWd~~--~~~~~~~~--------~~-~~v~~i~w--sPd-G~~lat~s~~~~~~~D~~i~iW~~~ 73 (143)
||.++... +++|.+++++ +.+ +... .. ..+..+|. +|+ |++.+..+. .++.+..|++.
T Consensus 88 la~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~-----k~G~~~q~~l~ 161 (355)
T 3amr_A 88 IAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTG-----KEGEFEQYELK 161 (355)
T ss_dssp EEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEEC-----SSSEEEEEEEE
T ss_pred EEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEEC-----CCCeEEEEEEE
Confidence 44444324 5789999763 433 2222 11 45667777 884 664444443 57788888772
Q ss_pred --------CcEEEecc-CCcEEEEEEeeCCCeeeecCchhhH
Q psy5876 74 --------GKIIKRFN-SPTFCQLRWRPRPASLLSKEQVDKI 106 (143)
Q Consensus 74 --------g~~l~~~~-~~~v~~l~wsP~~~~l~s~s~d~~i 106 (143)
+++++++. ...+-.+..-|....|.-+.++..|
T Consensus 162 ~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~GI 203 (355)
T 3amr_A 162 ADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEAI 203 (355)
T ss_dssp ECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEE
T ss_pred eCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccceE
Confidence 24556554 4567778888877777777666444
No 312
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=82.77 E-value=4.3 Score=34.56 Aligned_cols=58 Identities=10% Similarity=0.228 Sum_probs=36.7
Q ss_pred CeEecCCCEEEEEecC----------CCCeEEEEECCCceEEe--eec-cCceEEEEECCCCCEEEEeecC
Q psy5876 1 MKLRMRGTHIVLAELR----------DTGSLEFVDTGDFSVMN--AAE-HHQATDVEWDPTGRYVMSGVSL 58 (143)
Q Consensus 1 i~~SPdG~~las~~~~----------~dg~i~iWd~~~~~~~~--~~~-~~~v~~i~wsPdG~~lat~s~~ 58 (143)
|.|.|+|++.+...-+ ..+.+..++..++++.. ... ...++.++||||+++|..+.+-
T Consensus 481 L~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred eEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeC
Confidence 4688999877632110 01246666666665432 222 2468999999999998887753
No 313
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=82.45 E-value=17 Score=29.01 Aligned_cols=87 Identities=18% Similarity=0.199 Sum_probs=62.1
Q ss_pred EecCCCEEEEEecCCCCeEEEEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCc--E--E
Q psy5876 3 LRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGK--I--I 77 (143)
Q Consensus 3 ~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~--~--l 77 (143)
.+|..+.||.-. ..+++++|+++-+.+..+.. ..|.--.|-.+ +.|+-.+ ++.|+-|++.|. . +
T Consensus 74 MnP~~~ViALra---g~~LQiFnletK~klks~~~~e~VvfWkWis~-~~L~lVT-------~taVyHWs~~~~s~P~kv 142 (365)
T 2xzh_A 74 MNPASKVIALKA---GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVALVT-------DNAVYHWSMEGESQPVKM 142 (365)
T ss_dssp ECSSSSEEEEEE---TTEEEEEETTTTEEEEEEECSSCEEEEEECSS-SEEEEEE-------SSEEEEEESSTTCCCEEE
T ss_pred eCCCccEEEEec---CCeEEEechHHhhhhcceecCCccEEEEecCC-CeEEEEc-------CCcEEEEcccCCCCCcee
Confidence 368888898865 47899999999887776643 57888888855 4555555 568899999763 2 2
Q ss_pred Eecc----CCcEEEEEEeeCCCeeeec
Q psy5876 78 KRFN----SPTFCQLRWRPRPASLLSK 100 (143)
Q Consensus 78 ~~~~----~~~v~~l~wsP~~~~l~s~ 100 (143)
...+ ...|....-+|+.++++=.
T Consensus 143 FdR~~~L~~~QIInY~~d~~~kW~~l~ 169 (365)
T 2xzh_A 143 FDRHSSLAGCQIINYRTDAKQKWLLLT 169 (365)
T ss_dssp EECCGGGTTCEEEEEEECTTSCEEEEE
T ss_pred eecchhcccceEEEEEECCCCCEEEEE
Confidence 2222 4468888888888887743
No 314
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.41 E-value=5.3 Score=35.53 Aligned_cols=32 Identities=9% Similarity=0.013 Sum_probs=26.1
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEeee
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAA 35 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~ 35 (143)
+..++..+|.+-+ .|+++|+|++.+++++.+.
T Consensus 242 ~~~~~~~~lftl~--~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 242 IFLSTYNVLVMLS--LDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp EEETTTTEEEEEE--TTCEEEEEETTTTEEEEEE
T ss_pred eecCCCcEEEEEE--CCCEEEEEECCCCCeEeee
Confidence 3467788888877 6999999999999887653
No 315
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=82.20 E-value=5.3 Score=33.77 Aligned_cols=70 Identities=14% Similarity=0.139 Sum_probs=46.8
Q ss_pred eEecCCCEEEEEecCCCC-------------------eEEEEECCCceEEeeec---c--------CceEEEEECCCCC-
Q psy5876 2 KLRMRGTHIVLAELRDTG-------------------SLEFVDTGDFSVMNAAE---H--------HQATDVEWDPTGR- 50 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg-------------------~i~iWd~~~~~~~~~~~---~--------~~v~~i~wsPdG~- 50 (143)
++.|++..+..+. .++ .|.-+|..+++.+-.++ + .++.......||+
T Consensus 236 a~d~~~~~vy~~~--~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 236 AYDPELDLLYVGT--GNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp EEETTTTEEEEEC--CCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred EEcCCCCEEEEeC--CCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 5677878887775 344 48899999998765542 1 1222233335776
Q ss_pred --EEEEeecCcceecCCcEEEEee-cCcEEEe
Q psy5876 51 --YVMSGVSLWKTKADTGYWQWSF-QGKIIKR 79 (143)
Q Consensus 51 --~lat~s~~~~~~~D~~i~iW~~-~g~~l~~ 79 (143)
.++.++ .++.++++|. +|+++..
T Consensus 314 ~~~v~~~~------~~G~l~~lD~~tG~~l~~ 339 (668)
T 1kv9_A 314 RKVLMQAP------KNGFFYVLDRTNGKLISA 339 (668)
T ss_dssp EEEEEECC------TTSEEEEEETTTCCEEEE
T ss_pred EEEEEEEC------CCCEEEEEECCCCCEecc
Confidence 677777 5889999998 6888743
No 316
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=81.74 E-value=17 Score=28.49 Aligned_cols=92 Identities=11% Similarity=0.027 Sum_probs=52.8
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceE--EeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEEe
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSV--MNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 79 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~--~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~~ 79 (143)
++.+.++.|..+.. ..+.|.+.+.+.... +..........|+.+|.+.+|.-.... ..+.|...+.+|.....
T Consensus 165 avD~~~~~lY~~d~-~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~----~~~~I~~~~~dG~~~~~ 239 (400)
T 3p5b_L 165 AVDWIHSNIYWTDS-VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYS 239 (400)
T ss_dssp EEETTTTEEEEEET-TTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECS----SSCCEEEEETTSCSCEE
T ss_pred EEEecCCceEEEEC-CCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCC----CCCEEEEEeCCCCccEE
Confidence 44454444444332 356777777664322 211123457899999977666544310 23577788888764333
Q ss_pred c---cCCcEEEEEEeeCCCeee
Q psy5876 80 F---NSPTFCQLRWRPRPASLL 98 (143)
Q Consensus 80 ~---~~~~v~~l~wsP~~~~l~ 98 (143)
. ....-..|++.|++..|.
T Consensus 240 ~~~~~l~~P~glavd~~~~~lY 261 (400)
T 3p5b_L 240 LVTENIQWPNGITLDLLSGRLY 261 (400)
T ss_dssp EECSSCSCEEEEEEETTTTEEE
T ss_pred EEECCCCceEEEEEEeCCCEEE
Confidence 2 234567899998776554
No 317
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=81.30 E-value=22 Score=29.51 Aligned_cols=86 Identities=19% Similarity=0.205 Sum_probs=60.8
Q ss_pred EecCCCEEEEEecCCCCeEEEEECCCceEEeeec-cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCc--E--E
Q psy5876 3 LRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE-HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGK--I--I 77 (143)
Q Consensus 3 ~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~-~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~--~--l 77 (143)
.+|..+.||.=. ..+++|+|+++-..+..+. ...|.--.|-.+ +.|+-.+ ++.|+-|++.|. . +
T Consensus 73 MnP~~~iiALra---g~~lQiFnle~K~klks~~~~e~VvfWkWis~-~~l~lVT-------~taVyHWsi~~~s~P~kv 141 (494)
T 1bpo_A 73 MNPASKVIALKA---GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVALVT-------DNAVYHWSMEGESQPVKM 141 (494)
T ss_dssp ECSSSSCEEEEE---TTEEEEEETTTTEEEEEEECSSCCCEEEEEET-TEEEEEC-------SSEEEEEESSSSCCCEEE
T ss_pred eCCCCcEEEEec---CCeEEEEchHHhhhhcceecCCCceEEEecCC-CeEEEEc-------CCeeEEecccCCCCchhh
Confidence 368888888864 4799999999987777654 346777778744 4555555 668899999763 3 2
Q ss_pred Eecc----CCcEEEEEEeeCCCeeee
Q psy5876 78 KRFN----SPTFCQLRWRPRPASLLS 99 (143)
Q Consensus 78 ~~~~----~~~v~~l~wsP~~~~l~s 99 (143)
+..+ ...|....-+|+.++++=
T Consensus 142 FdR~~~L~~~QIInY~~d~~~kW~~l 167 (494)
T 1bpo_A 142 FDRHSSLAGCQIINYRTDAKQKWLLL 167 (494)
T ss_dssp EECCGGGTTCEEEEEEECTTSSEEEE
T ss_pred eecchhcccceEEEEEECCCCCeEEE
Confidence 2222 457888888899898874
No 318
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=80.48 E-value=21 Score=30.22 Aligned_cols=90 Identities=12% Similarity=0.159 Sum_probs=56.8
Q ss_pred ecCCCEEEEEecCCCCeEEEEECCCceE--Eeeec-----cCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcE
Q psy5876 4 RMRGTHIVLAELRDTGSLEFVDTGDFSV--MNAAE-----HHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKI 76 (143)
Q Consensus 4 SPdG~~las~~~~~dg~i~iWd~~~~~~--~~~~~-----~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~ 76 (143)
.++|+.. .|+ . +.|..+|..+++. ..... ...|.++..+++|+..+... ++++..++.++..
T Consensus 458 d~~g~lw-igt--~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-------~~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 458 DKNKKIW-IGT--H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-------GGGVGIYTPDMQL 526 (781)
T ss_dssp CTTSEEE-EEE--T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-------SSCEEEECTTCCE
T ss_pred CCCCCEE-EEE--C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-------CCCEEEEeCCCCe
Confidence 3455543 344 2 4577888776432 22211 24689999999999766443 4678889887554
Q ss_pred EEec------cCCcEEEEEEeeCCCeeeecCchhh
Q psy5876 77 IKRF------NSPTFCQLRWRPRPASLLSKEQVDK 105 (143)
Q Consensus 77 l~~~------~~~~v~~l~wsP~~~~l~s~s~d~~ 105 (143)
+... ..+.|.++...++|...++.. .+.
T Consensus 527 ~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Gl 560 (781)
T 3v9f_A 527 VRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGL 560 (781)
T ss_dssp EEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEE
T ss_pred EEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCc
Confidence 4432 135789999888998766544 444
No 319
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=79.41 E-value=26 Score=29.67 Aligned_cols=86 Identities=9% Similarity=0.028 Sum_probs=53.8
Q ss_pred cCCCEEEEEecCCCCeEEEEECCCceEEe-----eeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEEe
Q psy5876 5 MRGTHIVLAELRDTGSLEFVDTGDFSVMN-----AAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 79 (143)
Q Consensus 5 PdG~~las~~~~~dg~i~iWd~~~~~~~~-----~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~~ 79 (143)
++|+.. .|+ .++-|..+|..+.+... ......|.++.-+++|+..+ |+ .++++..++.....+..
T Consensus 372 ~~g~lW-igt--~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt------~~~Gl~~~~~~~~~~~~ 441 (781)
T 3v9f_A 372 GQGKLW-IGT--DGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GT------YLGNISYYNTRLKKFQI 441 (781)
T ss_dssp TTSCEE-EEE--BSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EE------TTEEEEEECSSSCEEEE
T ss_pred CCCCEE-EEe--CCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-Ee------ccCCEEEEcCCCCcEEE
Confidence 455544 333 24557888877643322 11235689999999998766 44 25688889886444433
Q ss_pred c-----cCCcEEEEEEeeCCCeeeec
Q psy5876 80 F-----NSPTFCQLRWRPRPASLLSK 100 (143)
Q Consensus 80 ~-----~~~~v~~l~wsP~~~~l~s~ 100 (143)
. ....|.++...++|...+..
T Consensus 442 ~~~~~~~~~~v~~i~~d~~g~lwigt 467 (781)
T 3v9f_A 442 IELEKNELLDVRVFYEDKNKKIWIGT 467 (781)
T ss_dssp CCSTTTCCCCEEEEEECTTSEEEEEE
T ss_pred eccCCCCCCeEEEEEECCCCCEEEEE
Confidence 2 23578888888888766544
No 320
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=79.04 E-value=18 Score=27.19 Aligned_cols=64 Identities=13% Similarity=0.044 Sum_probs=42.7
Q ss_pred CCEEEEEecCCCCeEEEEECCCceEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEEEec
Q psy5876 7 GTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRF 80 (143)
Q Consensus 7 G~~las~~~~~dg~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l~~~ 80 (143)
+..+..++ .+|.+..+|..+++.+-.........+.. ++..+..++ .++.+..+|. +|+.+.+.
T Consensus 239 ~~~v~~~~--~~g~l~~~d~~tG~~~w~~~~~~~~~~~~--~~~~l~~~~------~~g~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 239 NGVVFALA--YNGNLTALDLRSGQIMWKRELGSVNDFIV--DGNRIYLVD------QNDRVMALTIDGGVTLWTQ 303 (376)
T ss_dssp TTEEEEEC--TTSCEEEEETTTCCEEEEECCCCEEEEEE--ETTEEEEEE------TTCCEEEEETTTCCEEEEE
T ss_pred CCEEEEEe--cCcEEEEEECCCCcEEeeccCCCCCCceE--ECCEEEEEc------CCCeEEEEECCCCcEEEee
Confidence 34555665 47899999999998876654444444444 355666666 4778889998 57766543
No 321
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=78.84 E-value=6.2 Score=33.23 Aligned_cols=29 Identities=17% Similarity=0.244 Sum_probs=21.5
Q ss_pred cCC---CEEEEEecCCCCeEEEEECCCceEEeee
Q psy5876 5 MRG---THIVLAELRDTGSLEFVDTGDFSVMNAA 35 (143)
Q Consensus 5 PdG---~~las~~~~~dg~i~iWd~~~~~~~~~~ 35 (143)
.+| +.++.++ .+|.+...|..+++.+-..
T Consensus 318 ~~G~~~~~v~~~~--~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 318 KDGKARKLLTHPD--RNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp TTSCEEEEEEEEC--TTSEEEEEETTTCCEEEEE
T ss_pred cCCcEEEEEEEEC--CCcEEEEEECCCCCEeecc
Confidence 467 3556566 5899999999998877543
No 322
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=77.41 E-value=31 Score=28.99 Aligned_cols=94 Identities=6% Similarity=-0.003 Sum_probs=58.3
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCCc--eEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcE--
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGDF--SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKI-- 76 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~~--~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~-- 76 (143)
|+|.|++..|..+.. .++.|..++.+.. +.+..........++.++.++.|..+.. ..+.|.+.+++|..
T Consensus 42 l~~d~~~~~lywtD~-~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~-----~~~~I~v~~~dG~~~~ 115 (628)
T 4a0p_A 42 LDFDVTDNRIYWTDI-SLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADT-----GTNRIEVSKLDGQHRQ 115 (628)
T ss_dssp EEEETTTTEEEEEET-TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET-----TTTEEEEEETTSTTCE
T ss_pred EEEECCCCEEEEEEC-CCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEEC-----CCCEEEEEecCCCcEE
Confidence 467887777766655 4678888887643 2222222245778999988776655543 46788888888753
Q ss_pred -EEeccCCcEEEEEEeeC-CCeeeec
Q psy5876 77 -IKRFNSPTFCQLRWRPR-PASLLSK 100 (143)
Q Consensus 77 -l~~~~~~~v~~l~wsP~-~~~l~s~ 100 (143)
+.......-..++..|. |....|.
T Consensus 116 ~l~~~~l~~P~~iavdp~~G~lY~tD 141 (628)
T 4a0p_A 116 VLVWKDLDSPRALALDPAEGFMYWTE 141 (628)
T ss_dssp EEECSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCcccEEEccCCCeEEEeC
Confidence 22222345578888874 4444453
No 323
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=76.22 E-value=4.2 Score=36.75 Aligned_cols=31 Identities=10% Similarity=0.022 Sum_probs=25.9
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCceEEee
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDFSVMNA 34 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~ 34 (143)
+..++.++|.+-+ .|+++|+|++.+++++.+
T Consensus 244 ~~~~~~~~lftL~--~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 244 IFLSTYNVLVMLS--LDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp EEETTTTEEEEEB--TTCEEEEEETTTTEEEEE
T ss_pred eccCCccEEEEEe--CCCEEEEEECCCCCeEEe
Confidence 4567888998887 699999999999988765
No 324
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=73.52 E-value=40 Score=28.33 Aligned_cols=93 Identities=10% Similarity=0.057 Sum_probs=56.0
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCC-c--eEEee-e----ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeec
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGD-F--SVMNA-A----EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ 73 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~-~--~~~~~-~----~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~ 73 (143)
.|.|.++.|.-+.. ..+.|..++.+. . +.+.. . ....+..+++++.|+.|.-+.. ..+.|.+.+.+
T Consensus 346 d~d~~~~~iy~sD~-~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~-----~~~~I~v~~~~ 419 (628)
T 4a0p_A 346 DYDPLDKQLYWIDS-RQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCE-----ATNVINVTRLD 419 (628)
T ss_dssp EEETTTTEEEEEET-TTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEET-----TTTEEEEEETT
T ss_pred EEecCCCeEEEEec-CcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcC-----CCCEEEEEECC
Confidence 45665555555543 356676676553 1 12221 0 1235789999999887655443 46788888888
Q ss_pred CcEEEec---cCCcEEEEEEee-CCCeeeec
Q psy5876 74 GKIIKRF---NSPTFCQLRWRP-RPASLLSK 100 (143)
Q Consensus 74 g~~l~~~---~~~~v~~l~wsP-~~~~l~s~ 100 (143)
|+..... ....-.+++..| +|.+..|.
T Consensus 420 G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD 450 (628)
T 4a0p_A 420 GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTN 450 (628)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred CCeEEEEEeCCCCceeeEEEecCCCeEEEee
Confidence 8754332 245677888888 56555553
No 325
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=72.51 E-value=17 Score=27.25 Aligned_cols=51 Identities=8% Similarity=0.026 Sum_probs=36.7
Q ss_pred CeEecCCCEEEEEecCCCCeEEEEECCC---------ceEEeeeccCceEEEEECCCCCEEEEe
Q psy5876 1 MKLRMRGTHIVLAELRDTGSLEFVDTGD---------FSVMNAAEHHQATDVEWDPTGRYVMSG 55 (143)
Q Consensus 1 i~~SPdG~~las~~~~~dg~i~iWd~~~---------~~~~~~~~~~~v~~i~wsPdG~~lat~ 55 (143)
+.|-|+|.+.++ + ||.|.-++-.+ ...+-......+..|.++|+|...|..
T Consensus 93 ~~fD~~G~LYav-~---dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 93 LFFDPNGYLYAV-S---KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp EEECTTSCEEEE-E---TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred EEECCCCCEEEe-C---CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 357899999988 5 69998888532 223333233578999999999987766
No 326
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=69.71 E-value=10 Score=32.43 Aligned_cols=74 Identities=8% Similarity=0.096 Sum_probs=48.3
Q ss_pred ceEEEEECCCCCEEEEeecCcceecCCcEEEEeec-------CcE-------EEecc-CCcEEEEEEeeCCCeeeecCch
Q psy5876 39 QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ-------GKI-------IKRFN-SPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 39 ~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~-------g~~-------l~~~~-~~~v~~l~wsP~~~~l~s~s~d 103 (143)
..-.+..+|||+|++.++- .+.++.++|++ +++ ..+.. ...-.+.+|.++|.-..|-.-|
T Consensus 324 sPHGv~vsPDGkyi~v~GK-----LsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfid 398 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGK-----LSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFID 398 (638)
T ss_dssp SCCCEEECTTSCEEEEECT-----TSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTT
T ss_pred CCcceeeCCCCCEEEEcCC-----CCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeec
Confidence 3446889999999999985 68899999885 222 22222 3466789999999655565555
Q ss_pred hhHH-hhhhhhchhc
Q psy5876 104 DKIK-KSLKKYTPAF 117 (143)
Q Consensus 104 ~~i~-~~~~~~~~~~ 117 (143)
..|. =|+..-.+.|
T Consensus 399 SqvvkWni~~a~~~~ 413 (638)
T 3sbq_A 399 SQVVKWNMEEAVRAY 413 (638)
T ss_dssp TEEEEEEHHHHHHHH
T ss_pred ceEEEEeccHHHHHh
Confidence 5443 2444433333
No 327
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=69.53 E-value=49 Score=27.70 Aligned_cols=93 Identities=8% Similarity=-0.066 Sum_probs=56.2
Q ss_pred eEecCCCEEEEEecCCCCeEEEEECCCc--eEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEEe
Q psy5876 2 KLRMRGTHIVLAELRDTGSLEFVDTGDF--SVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKR 79 (143)
Q Consensus 2 ~~SPdG~~las~~~~~dg~i~iWd~~~~--~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~~ 79 (143)
.|.|.+..|..+.. ..+.|.-++.+.. +.+..........+++++.++.|..+.. ..+.|.+-+.+|+....
T Consensus 355 d~d~~~~~ly~sD~-~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~-----~~~~I~v~~~~G~~~~~ 428 (619)
T 3s94_A 355 DYDPVEGYIYWTDD-EVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDT-----GTDRIEVTRLNGTMRKI 428 (619)
T ss_dssp EEETTTTEEEEEET-TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCEE
T ss_pred EEEcCCCeEEEEeC-CCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeC-----CCCcEEEEeCCCCeEEE
Confidence 56675555555543 3577777776642 2222222245778999987665555543 46788888888763322
Q ss_pred ---ccCCcEEEEEEeeC-CCeeeec
Q psy5876 80 ---FNSPTFCQLRWRPR-PASLLSK 100 (143)
Q Consensus 80 ---~~~~~v~~l~wsP~-~~~l~s~ 100 (143)
.....-.++++.|. |...+|.
T Consensus 429 l~~~~l~~P~~iavdp~~G~ly~tD 453 (619)
T 3s94_A 429 LISEDLEEPRAIVLDPMVGYMYWTD 453 (619)
T ss_dssp EECTTCCSEEEEEEETTTTEEEEEE
T ss_pred EEECCCCCeeeEEEEcCCCcEEEec
Confidence 22456678888885 5555554
No 328
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=66.00 E-value=9.7 Score=33.19 Aligned_cols=30 Identities=10% Similarity=0.222 Sum_probs=24.8
Q ss_pred ecCCCEEEEEecCCCCeEEEEECCCceEEeee
Q psy5876 4 RMRGTHIVLAELRDTGSLEFVDTGDFSVMNAA 35 (143)
Q Consensus 4 SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~ 35 (143)
.++.++|++-+ .|.++|+||+.+++++.+.
T Consensus 228 ~~~~~fLftL~--~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 228 LFHERYLIVLT--QNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EETTTEEEEEE--TTCEEEEEETTTTEEEEEE
T ss_pred ccCCcEEEEEE--cCCeEEEEEcCCCceEEee
Confidence 45677888887 6999999999999887654
No 329
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=65.16 E-value=16 Score=30.90 Aligned_cols=61 Identities=11% Similarity=0.110 Sum_probs=36.9
Q ss_pred eEEEEECCCCCEEEEeecCcc----e--ecCCcEEEEeec-CcEEEec--c-CCcEEEEEEeeCCCeeeec
Q psy5876 40 ATDVEWDPTGRYVMSGVSLWK----T--KADTGYWQWSFQ-GKIIKRF--N-SPTFCQLRWRPRPASLLSK 100 (143)
Q Consensus 40 v~~i~wsPdG~~lat~s~~~~----~--~~D~~i~iW~~~-g~~l~~~--~-~~~v~~l~wsP~~~~l~s~ 100 (143)
.-.|+|+|+|+++++--.... + ...+.+.+.+.. |++.+.. + ...+..++|+||++.|...
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 357899999996655432100 0 012334444543 5543322 2 4589999999999988764
No 330
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=62.17 E-value=11 Score=33.47 Aligned_cols=35 Identities=6% Similarity=-0.050 Sum_probs=29.5
Q ss_pred ceEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEEEe
Q psy5876 39 QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 79 (143)
Q Consensus 39 ~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l~~ 79 (143)
.+.+++..+|..++.|-+ .|+.+|||++ +|+++..
T Consensus 237 ~~~~~~~~~~~~~lftl~------~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLS------LDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTTEEEEEE------TTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCcEEEEEE------CCCEEEEEECCCCCeEee
Confidence 467888999999999999 6999999998 5777764
No 331
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=52.41 E-value=91 Score=25.15 Aligned_cols=20 Identities=15% Similarity=0.182 Sum_probs=16.2
Q ss_pred CceEEEEECCCCCEEEEeec
Q psy5876 38 HQATDVEWDPTGRYVMSGVS 57 (143)
Q Consensus 38 ~~v~~i~wsPdG~~lat~s~ 57 (143)
+....|+|.|||.++++.++
T Consensus 139 H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 139 HLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp SCEEEEEECTTSCEEEEECC
T ss_pred ccCCcEeECCCCcEEEEeCC
Confidence 46789999999997777664
No 332
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=50.74 E-value=10 Score=34.31 Aligned_cols=34 Identities=6% Similarity=-0.051 Sum_probs=28.0
Q ss_pred eEEEEECCCCCEEEEeecCcceecCCcEEEEee-cCcEEEe
Q psy5876 40 ATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSF-QGKIIKR 79 (143)
Q Consensus 40 v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~-~g~~l~~ 79 (143)
+.+++..++..++.|-+ .|+.+|||++ +|+++..
T Consensus 240 ~vs~~~~~~~~~lftL~------~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLS------LDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp BSCCEEETTTTEEEEEB------TTCEEEEEETTTTEEEEE
T ss_pred eEEeeccCCccEEEEEe------CCCEEEEEECCCCCeEEe
Confidence 45667778889999988 6999999999 5777765
No 333
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=49.21 E-value=1.1e+02 Score=25.30 Aligned_cols=59 Identities=12% Similarity=0.149 Sum_probs=33.2
Q ss_pred ecCCCEEEEEecCCCCeEEEEECCCceEEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEE
Q psy5876 4 RMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII 77 (143)
Q Consensus 4 SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l 77 (143)
|+.=..+-.-+ .-|.++++|++|+.++.... .|+|--++.+... ..+++..=+-.|+.+
T Consensus 267 s~kygviyviT--K~G~i~lyDleTgt~i~~nr--------Is~~~iF~t~~~~-----~~~Gi~~Vnr~GqVl 325 (494)
T 1bpo_A 267 SEKHDVVFLIT--KYGYIHLYDLETGTCIYMNR--------ISGETIFVTAPHE-----ATAGIIGVNRKGQVL 325 (494)
T ss_dssp ETTTTEEEEEE--TTSEEEEEETTTCCEEEEEE--------CCSSCEEEEEEET-----TTTEEEEEETTCEEE
T ss_pred cccCCEEEEEe--cCceEEEEecccceeeeeec--------ccCCceEEecccC-----CCCcEEEEccCceEE
Confidence 33333444444 46999999999998887653 3444433332221 345565555555544
No 334
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=46.12 E-value=76 Score=26.95 Aligned_cols=62 Identities=11% Similarity=0.103 Sum_probs=39.1
Q ss_pred ceEEEEECCCCCEEEEeecCcc----e--ecCCcEEEEee-cCcEEEecc---CCcEEEEEEeeCCCeeeec
Q psy5876 39 QATDVEWDPTGRYVMSGVSLWK----T--KADTGYWQWSF-QGKIIKRFN---SPTFCQLRWRPRPASLLSK 100 (143)
Q Consensus 39 ~v~~i~wsPdG~~lat~s~~~~----~--~~D~~i~iW~~-~g~~l~~~~---~~~v~~l~wsP~~~~l~s~ 100 (143)
....|.|+|+|...++--.... + ...+.+...+. +|++..... ...++.++|+||++.|...
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 4678999999997663221100 0 11335666677 465433222 3578999999999988764
No 335
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=42.57 E-value=53 Score=20.75 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=34.4
Q ss_pred CCCeEEEEECCCceEEee-e---ccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEEeccCCcEEEEEEee
Q psy5876 17 DTGSLEFVDTGDFSVMNA-A---EHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRFNSPTFCQLRWRP 92 (143)
Q Consensus 17 ~dg~i~iWd~~~~~~~~~-~---~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~~~~~~~v~~l~wsP 92 (143)
.||.+.+|+..+ .+-. . +......+.+.+||.+++.-. ++. .||..... ....-+.+...+
T Consensus 27 ~DgNLvly~~~~--~vW~ant~~~~~~~~~L~l~~dGnLvL~d~-------~~~-~vWss~t~-----~~~~~~~l~L~d 91 (105)
T 4h3o_A 27 DDCNLVLYDHST--STWASNTEIGGKSGCSAVLQSDGNFVVYDS-------SGR-SLWASHST-----RGSGNYILILQD 91 (105)
T ss_dssp TTSCEEEEETTE--EEEECCCCCTTCCSCEEEECTTSCEEEECT-------TCC-EEEECCCC-----CCSSCEEEEECT
T ss_pred CCCeEEEEECCE--EEEEecCCCCCCccEEEEEeCCccEEEECC-------CcE-EEEEecCC-----CCCCCEEEEEeC
Confidence 577777777432 2211 1 112234577888888776543 222 37765210 011223355667
Q ss_pred CCCeeee
Q psy5876 93 RPASLLS 99 (143)
Q Consensus 93 ~~~~l~s 99 (143)
+|..++-
T Consensus 92 dGNlVly 98 (105)
T 4h3o_A 92 DGNVIIY 98 (105)
T ss_dssp TSCEEEE
T ss_pred CCeEEEE
Confidence 7776553
No 336
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=40.66 E-value=1.4e+02 Score=23.81 Aligned_cols=19 Identities=11% Similarity=0.114 Sum_probs=16.1
Q ss_pred CCCeEEEEECCCceEEeee
Q psy5876 17 DTGSLEFVDTGDFSVMNAA 35 (143)
Q Consensus 17 ~dg~i~iWd~~~~~~~~~~ 35 (143)
.-|.++++|++|+.++...
T Consensus 279 K~G~ihlyDleTgt~i~~n 297 (365)
T 2xzh_A 279 KYGYIHLYDLETGTCIYMN 297 (365)
T ss_dssp TTSEEEEEETTTCCEEEEE
T ss_pred CCcEEEEEEcccCcEEEEe
Confidence 4699999999999888765
No 337
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=39.02 E-value=1.3e+02 Score=27.34 Aligned_cols=51 Identities=12% Similarity=0.173 Sum_probs=33.9
Q ss_pred CeEEEEECCCceEE--eeec-cCceEEEEECCC------CCEEEEeecCcceecCCcEEEEeecC
Q psy5876 19 GSLEFVDTGDFSVM--NAAE-HHQATDVEWDPT------GRYVMSGVSLWKTKADTGYWQWSFQG 74 (143)
Q Consensus 19 g~i~iWd~~~~~~~--~~~~-~~~v~~i~wsPd------G~~lat~s~~~~~~~D~~i~iW~~~g 74 (143)
+.+.++.++.+++. .+.+ ...|+++++.|. ++++|.|.. .|++++|+++..
T Consensus 532 ~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~-----~d~tv~I~sL~~ 591 (1158)
T 3ei3_A 532 RALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLW-----TDISARILKLPS 591 (1158)
T ss_dssp TEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEET-----TTTEEEEEETTT
T ss_pred CEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEEC-----CCCEEEEEECCC
Confidence 56666666544322 2211 257999999874 468998883 388999999963
No 338
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=38.11 E-value=1.2e+02 Score=29.00 Aligned_cols=86 Identities=21% Similarity=0.263 Sum_probs=58.2
Q ss_pred EecCCCEEEEEecCCCCeEEEEECCCceEEeeecc-CceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCc--EEEe
Q psy5876 3 LRMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAEH-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGK--IIKR 79 (143)
Q Consensus 3 ~SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~--~l~~ 79 (143)
.+|..+.||.=. ..+++|+|+++-..+..+.. .+|.--.|-.+. .|+-.+ ++.|+-|++.|. ....
T Consensus 73 MnP~~~iiALra---g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~-~l~lVT-------~~aVyHW~~~~~s~P~k~ 141 (1630)
T 1xi4_A 73 MNPASKVIALKA---GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVALVT-------DNAVYHWSMEGESQPVKM 141 (1630)
T ss_pred cCCCcceEEEec---CCeEEEeehHHhhhhcccccCCCceEEEecCCC-eeEEEc-------CCeEEEeccCCCCccHHH
Confidence 368888888754 47899999998666665532 467777887443 455444 568999999763 2211
Q ss_pred c--c----CCcEEEEEEeeCCCeeee
Q psy5876 80 F--N----SPTFCQLRWRPRPASLLS 99 (143)
Q Consensus 80 ~--~----~~~v~~l~wsP~~~~l~s 99 (143)
+ + ...|.+..-+|+.++++-
T Consensus 142 fdR~~~L~~~QIinY~~d~~~kW~~l 167 (1630)
T 1xi4_A 142 FDRHSSLAGCQIINYRTDAKQKWLLL 167 (1630)
T ss_pred HhcchhcccCeeEEeeeCCCCCeEEE
Confidence 1 1 346777888888888874
No 339
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=37.53 E-value=20 Score=30.81 Aligned_cols=32 Identities=6% Similarity=-0.083 Sum_probs=23.7
Q ss_pred eEecCCCEEEEEec-C--CCCeEEEEECCCceEEe
Q psy5876 2 KLRMRGTHIVLAEL-R--DTGSLEFVDTGDFSVMN 33 (143)
Q Consensus 2 ~~SPdG~~las~~~-~--~dg~i~iWd~~~~~~~~ 33 (143)
+++|||++++.+=. + +-..++++|+.+++.+.
T Consensus 136 ~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~ 170 (711)
T 4hvt_A 136 NCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK 170 (711)
T ss_dssp ECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT
T ss_pred ecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC
Confidence 37999999988621 1 22489999999988764
No 340
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=34.93 E-value=1.2e+02 Score=21.65 Aligned_cols=97 Identities=9% Similarity=-0.085 Sum_probs=50.2
Q ss_pred cCCCEEEEEecCC---CCeEEEEECCCce--EEeeeccC--ceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEE
Q psy5876 5 MRGTHIVLAELRD---TGSLEFVDTGDFS--VMNAAEHH--QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII 77 (143)
Q Consensus 5 PdG~~las~~~~~---dg~i~iWd~~~~~--~~~~~~~~--~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l 77 (143)
-+|+.++.||.+. ...+..+|..+.+ .+...... ....+.. +++.++.|+.... ..-+.+.+||+....-
T Consensus 158 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~-~~~~~v~~yd~~~~~W 234 (301)
T 2vpj_A 158 ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGT-AHLSSVEAYNIRTDSW 234 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSS-SBCCCEEEEETTTTEE
T ss_pred ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCC-cccceEEEEeCCCCcE
Confidence 3677777777531 2468899977643 33322221 1222222 6777777764211 0135688888864432
Q ss_pred Ee---ccCCcEEEEEEeeCCCeeeecCchh
Q psy5876 78 KR---FNSPTFCQLRWRPRPASLLSKEQVD 104 (143)
Q Consensus 78 ~~---~~~~~v~~l~wsP~~~~l~s~s~d~ 104 (143)
.. .+.......+..-+++.++-++.+.
T Consensus 235 ~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 264 (301)
T 2vpj_A 235 TTVTSMTTPRCYVGATVLRGRLYAIAGYDG 264 (301)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred EECCCCCCcccceeEEEECCEEEEEcCcCC
Confidence 22 2222222222333777778777543
No 341
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=34.82 E-value=1.7e+02 Score=23.04 Aligned_cols=69 Identities=7% Similarity=0.062 Sum_probs=42.7
Q ss_pred cCCCEEEEEecCCCC--eEEEEECCCceEEeee--c--c-C---ce-EEEEECCCCCEEEEeecCcceecCCcEEEEeec
Q psy5876 5 MRGTHIVLAELRDTG--SLEFVDTGDFSVMNAA--E--H-H---QA-TDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQ 73 (143)
Q Consensus 5 PdG~~las~~~~~dg--~i~iWd~~~~~~~~~~--~--~-~---~v-~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~ 73 (143)
++.++|+-=.. ... .|.++|+++++++.+. + + . .+ .++....+...++++- ...++.+.|.+
T Consensus 37 ~~k~yL~~~N~-~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~------~~~~i~l~n~~ 109 (369)
T 3s9j_A 37 NGKEYLHFENT-QKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQN------NISRLSSINSQ 109 (369)
T ss_dssp TTEEEEEEEEC-STTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEG------GGTEEEEECTT
T ss_pred CCcEEEEEeCC-CCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeC------CcceEEEECCC
Confidence 33445554332 456 8999999999887653 2 1 1 23 2444455666666554 24467778888
Q ss_pred CcEEEec
Q psy5876 74 GKIIKRF 80 (143)
Q Consensus 74 g~~l~~~ 80 (143)
|+.+.+.
T Consensus 110 G~~~~k~ 116 (369)
T 3s9j_A 110 GEIIRNY 116 (369)
T ss_dssp CCEEEEE
T ss_pred ceEEEEE
Confidence 8887763
No 342
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=33.04 E-value=98 Score=19.90 Aligned_cols=78 Identities=12% Similarity=0.070 Sum_probs=36.6
Q ss_pred ecCCCEEEEEecCCCCeEEEEECCCceEEeeec--c-CceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEEec
Q psy5876 4 RMRGTHIVLAELRDTGSLEFVDTGDFSVMNAAE--H-HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIKRF 80 (143)
Q Consensus 4 SPdG~~las~~~~~dg~i~iWd~~~~~~~~~~~--~-~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~~~ 80 (143)
||+|.+-+.-. .||.+.+++. +..+-.-. . ..-..+....||.+++... ++. .+|.-.. .
T Consensus 27 S~~g~~~L~~~--~dgnlvly~~--~~~vW~sn~~~~~~~~~l~l~~dGNLVl~d~-------~~~-~lW~S~~-----~ 89 (119)
T 1b2p_A 27 FGTHVYRFIMQ--TDCNLVLYDN--NNPIWATNTGGLGNGCRAVLQPDGVLVVITN-------ENV-TVWQSPV-----A 89 (119)
T ss_dssp ETTEEEEEEEC--TTSCEEEEET--TEEEEECCCTTSCSSCEEEECTTSCEEEECT-------TCC-EEEECSC-----C
T ss_pred CCCCCEEEEEe--cCCCEEEEEC--CEEEEeCCCccCCCceEEEEccCCEEEEEeC-------CCc-EEEcCCC-----C
Confidence 56665544432 4676666664 22222111 1 1123566777777766532 222 3675421 0
Q ss_pred cCCcEEEEEEeeCCCeee
Q psy5876 81 NSPTFCQLRWRPRPASLL 98 (143)
Q Consensus 81 ~~~~v~~l~wsP~~~~l~ 98 (143)
.....+.+...|+|..++
T Consensus 90 ~~~g~~~l~l~~~Gnlvl 107 (119)
T 1b2p_A 90 GKAGHYVLVLQPDRNVVI 107 (119)
T ss_dssp CCSSCEEEEECTTSCEEE
T ss_pred CCCCCEEEEEECCCcEEE
Confidence 112234556666666444
No 343
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=32.93 E-value=1.4e+02 Score=21.53 Aligned_cols=97 Identities=7% Similarity=-0.067 Sum_probs=49.5
Q ss_pred cCCCEEEEEecC--CCCeEEEEECCCce--EEeeeccC--ceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE
Q psy5876 5 MRGTHIVLAELR--DTGSLEFVDTGDFS--VMNAAEHH--QATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 78 (143)
Q Consensus 5 PdG~~las~~~~--~dg~i~iWd~~~~~--~~~~~~~~--~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~ 78 (143)
-+++.++.||.+ .-..+..+|..+.+ .+...+.. ....+.. +|+.++.|+.......-+.+.+||.....-.
T Consensus 54 ~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 54 WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 356677777742 12578889977643 33332211 1222222 7787777774211112356788888644322
Q ss_pred e---ccCCcEEEEEEeeCCCeeeecCch
Q psy5876 79 R---FNSPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 79 ~---~~~~~v~~l~wsP~~~~l~s~s~d 103 (143)
. .+.....+.+..-++..++-|+.+
T Consensus 132 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 159 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVEANGLIYVCGGSL 159 (306)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCEE
T ss_pred eCCCCcCCcceeEEEEECCEEEEECCCC
Confidence 2 222222222223377777777654
No 344
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=31.96 E-value=72 Score=27.81 Aligned_cols=27 Identities=15% Similarity=0.258 Sum_probs=21.2
Q ss_pred CCCCEEEEeecCcceecCCcEEEEeec-CcEEEe
Q psy5876 47 PTGRYVMSGVSLWKTKADTGYWQWSFQ-GKIIKR 79 (143)
Q Consensus 47 PdG~~lat~s~~~~~~~D~~i~iW~~~-g~~l~~ 79 (143)
++..|++|-+ .|..+|+|++. |+++..
T Consensus 229 ~~~~fLftL~------~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 229 FHERYLIVLT------QNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp ETTTEEEEEE------TTCEEEEEETTTTEEEEE
T ss_pred cCCcEEEEEE------cCCeEEEEEcCCCceEEe
Confidence 3577988888 69999999995 666654
No 345
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=31.15 E-value=2e+02 Score=22.77 Aligned_cols=73 Identities=7% Similarity=-0.026 Sum_probs=0.0
Q ss_pred eEEEEECCCc--eEEeeec--------cCceEEEEEC---CC----CCEEEEeecCcceecCCcEEEEee-cCcEEEecc
Q psy5876 20 SLEFVDTGDF--SVMNAAE--------HHQATDVEWD---PT----GRYVMSGVSLWKTKADTGYWQWSF-QGKIIKRFN 81 (143)
Q Consensus 20 ~i~iWd~~~~--~~~~~~~--------~~~v~~i~ws---Pd----G~~lat~s~~~~~~~D~~i~iW~~-~g~~l~~~~ 81 (143)
+|.+||+.+. +++.++. ...+.+++.. |+ +.++..+-. ...++.++|+ +|+.-+-.+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~-----~~~gLIVydl~~~~swRv~~ 198 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNF-----LRGALFIYDHKKQDSWNVTH 198 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEET-----TTTEEEEEETTTTEEEEEEC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcC-----CCCcEEEEECCCCcEEEEcc
Q ss_pred --------------------CCcEEEEEEeeC----CCee
Q psy5876 82 --------------------SPTFCQLRWRPR----PASL 97 (143)
Q Consensus 82 --------------------~~~v~~l~wsP~----~~~l 97 (143)
...+..++.+|+ ++.|
T Consensus 199 ~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~L 238 (381)
T 3q6k_A 199 PTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPA 238 (381)
T ss_dssp GGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEE
T ss_pred CCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEE
No 346
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=28.27 E-value=1.4e+02 Score=22.07 Aligned_cols=97 Identities=10% Similarity=-0.021 Sum_probs=51.9
Q ss_pred CCCEEEEEecCCCCeEEEEECCC----ceEEeeec-cC--ceEEEEECCCCCEEEEeec-C---cceecCCcEEEEeecC
Q psy5876 6 RGTHIVLAELRDTGSLEFVDTGD----FSVMNAAE-HH--QATDVEWDPTGRYVMSGVS-L---WKTKADTGYWQWSFQG 74 (143)
Q Consensus 6 dG~~las~~~~~dg~i~iWd~~~----~~~~~~~~-~~--~v~~i~wsPdG~~lat~s~-~---~~~~~D~~i~iW~~~g 74 (143)
+++.++.||. ....+..+|..+ .+.+...+ .. ....+.. +|+.++.|+. . .....-+.+.+||+..
T Consensus 19 ~~~iyv~GG~-~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 19 NDTVYIGLGS-AGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TTEEEEECGG-GTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred CCEEEEEeCc-CCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 6667777876 345788999752 33343333 11 1222222 6787777774 1 0111235677888854
Q ss_pred cEEEe---cc-CCcEEEEEEeeCCCeeeecCchhh
Q psy5876 75 KIIKR---FN-SPTFCQLRWRPRPASLLSKEQVDK 105 (143)
Q Consensus 75 ~~l~~---~~-~~~v~~l~wsP~~~~l~s~s~d~~ 105 (143)
..-.. .. .......+...+++.++-|+.+..
T Consensus 96 ~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 130 (357)
T 2uvk_A 96 NSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQN 130 (357)
T ss_dssp TEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHH
T ss_pred CcEEECCCCCCcccccceEEEECCEEEEEeCcCCC
Confidence 43222 22 222223333468888888886654
No 347
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=27.75 E-value=1.7e+02 Score=21.20 Aligned_cols=98 Identities=10% Similarity=-0.076 Sum_probs=46.3
Q ss_pred CCCEEEEEecCC-C----CeEEEEECCCce--EEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE
Q psy5876 6 RGTHIVLAELRD-T----GSLEFVDTGDFS--VMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 78 (143)
Q Consensus 6 dG~~las~~~~~-d----g~i~iWd~~~~~--~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~ 78 (143)
+++.++.||... . ..+.++|..+.+ .+...+.......+...+|+.++.|+.......-+.+.+||.....-.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 188 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWK 188 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEE
Confidence 566777777420 1 358888977643 333222111111111247777777763211112345778888543322
Q ss_pred e---ccCCcEEEEEEeeCCCeeeecCch
Q psy5876 79 R---FNSPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 79 ~---~~~~~v~~l~wsP~~~~l~s~s~d 103 (143)
. .+......-+..-++..++-|+.+
T Consensus 189 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 216 (318)
T 2woz_A 189 DLAPMKTPRSMFGVAIHKGKIVIAGGVT 216 (318)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEEEEEE
T ss_pred ECCCCCCCcccceEEEECCEEEEEcCcC
Confidence 2 222221111222367777777654
No 348
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=26.67 E-value=1.4e+02 Score=20.83 Aligned_cols=27 Identities=7% Similarity=0.234 Sum_probs=19.5
Q ss_pred eEEeeeccCceEEEEECCCCCEEEEee
Q psy5876 30 SVMNAAEHHQATDVEWDPTGRYVMSGV 56 (143)
Q Consensus 30 ~~~~~~~~~~v~~i~wsPdG~~lat~s 56 (143)
+.+..++-.++-=+.|+|+|.+.|.+.
T Consensus 102 ~~i~~FDCRGlEp~eF~p~~~w~a~~~ 128 (164)
T 1zso_A 102 RDFASFECRGIELIDFFPSNNFIVEDT 128 (164)
T ss_dssp EEEEEEEEESEEEEEECCCSCEEEEET
T ss_pred eEEEEEECCCeeeEEEecCCcEEEEEC
Confidence 445555444555679999999999885
No 349
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=21.14 E-value=2.4e+02 Score=20.33 Aligned_cols=96 Identities=5% Similarity=-0.156 Sum_probs=49.3
Q ss_pred CCCEEEEEecCC---CCeEEEEECCCce--EEeeecc--CceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEEE
Q psy5876 6 RGTHIVLAELRD---TGSLEFVDTGDFS--VMNAAEH--HQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKIIK 78 (143)
Q Consensus 6 dG~~las~~~~~---dg~i~iWd~~~~~--~~~~~~~--~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l~ 78 (143)
+++.++.||.+. ...+..||..+.+ .+..... .....+.+ +++.++.|+.... ..-+.+.+||+....-.
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~-~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQ-DQLNSVERYDVETETWT 244 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSS-SBCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCC-CccceEEEEeCCCCcEE
Confidence 566777777531 2468899987643 2222221 11222333 7777777764210 01356888888654333
Q ss_pred ec---cCCcEEEEEEeeCCCeeeecCchh
Q psy5876 79 RF---NSPTFCQLRWRPRPASLLSKEQVD 104 (143)
Q Consensus 79 ~~---~~~~v~~l~wsP~~~~l~s~s~d~ 104 (143)
.. +.......+..-++..++-|+.+.
T Consensus 245 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 273 (308)
T 1zgk_A 245 FVAPMKHRRSALGITVHQGRIYVLGGYDG 273 (308)
T ss_dssp ECCCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred ECCCCCCCccceEEEEECCEEEEEcCcCC
Confidence 22 222211122223777888887554
No 350
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=20.95 E-value=48 Score=23.47 Aligned_cols=15 Identities=13% Similarity=0.255 Sum_probs=11.5
Q ss_pred EEEECCCCCEEEEee
Q psy5876 42 DVEWDPTGRYVMSGV 56 (143)
Q Consensus 42 ~i~wsPdG~~lat~s 56 (143)
-+-.+|||+||+.|.
T Consensus 36 ~~y~~~dg~~~i~G~ 50 (216)
T 1eej_A 36 VLYITDDGKHIIQGP 50 (216)
T ss_dssp EEEEETTSCEEEESC
T ss_pred EEEEcCCCCEEEEee
Confidence 355679999999765
No 351
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=20.20 E-value=2.5e+02 Score=20.23 Aligned_cols=98 Identities=7% Similarity=-0.142 Sum_probs=47.8
Q ss_pred CCCEEEEEecC------CCCeEEEEECCCce--EEeeeccCceEEEEECCCCCEEEEeecCcceecCCcEEEEeecCcEE
Q psy5876 6 RGTHIVLAELR------DTGSLEFVDTGDFS--VMNAAEHHQATDVEWDPTGRYVMSGVSLWKTKADTGYWQWSFQGKII 77 (143)
Q Consensus 6 dG~~las~~~~------~dg~i~iWd~~~~~--~~~~~~~~~v~~i~wsPdG~~lat~s~~~~~~~D~~i~iW~~~g~~l 77 (143)
+++.++.||.+ ....+.++|..+.+ .+...+.......+..-+++.++.|+.......-+.+.+||.....-
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 177 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEW 177 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeE
Confidence 55666777631 12468899987643 33222221111111224777777777421111235677888854432
Q ss_pred Ee---ccCCcEEEEEEeeCCCeeeecCch
Q psy5876 78 KR---FNSPTFCQLRWRPRPASLLSKEQV 103 (143)
Q Consensus 78 ~~---~~~~~v~~l~wsP~~~~l~s~s~d 103 (143)
.. .+.....+.+..-++..++.|+.+
T Consensus 178 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 206 (315)
T 4asc_A 178 KELAPMQTARSLFGATVHDGRIIVAAGVT 206 (315)
T ss_dssp EECCCCSSCCBSCEEEEETTEEEEEEEEC
T ss_pred EECCCCCCchhceEEEEECCEEEEEeccC
Confidence 22 222222222223367777777654
Done!