Query psy5878
Match_columns 565
No_of_seqs 341 out of 1090
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 20:22:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5878.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5878hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1m15_A Arginine kinase, AK; cr 100.0 4.3E-94 1.5E-98 750.2 25.1 270 296-565 22-309 (357)
2 3jpz_A Lombricine kinase; mixe 100.0 2.4E-91 8.2E-96 731.6 25.2 266 297-565 22-307 (366)
3 3ju5_A Arginine kinase, AK; re 100.0 2.4E-91 8.3E-96 731.7 24.2 264 298-565 27-311 (370)
4 1m15_A Arginine kinase, AK; cr 100.0 5.2E-90 1.8E-94 719.4 28.9 281 16-296 1-346 (357)
5 3l2f_A Glycocyamine kinase bet 100.0 4.9E-90 1.7E-94 725.3 26.4 265 297-565 42-331 (390)
6 1qh4_A Creatine kinase; cancer 100.0 3.4E-90 1.2E-94 724.5 24.0 261 301-565 35-319 (380)
7 2gl6_A Creatine kinase; non-pr 100.0 4.4E-89 1.5E-93 718.5 23.1 261 301-565 46-330 (392)
8 3ju5_A Arginine kinase, AK; re 100.0 3.8E-87 1.3E-91 700.0 27.6 268 25-295 11-347 (370)
9 3jpz_A Lombricine kinase; mixe 100.0 1.3E-86 4.3E-91 695.9 29.0 268 25-295 7-343 (366)
10 1qh4_A Creatine kinase; cancer 100.0 1.8E-86 6.1E-91 696.3 28.4 268 25-295 15-355 (380)
11 3l2f_A Glycocyamine kinase bet 100.0 9.3E-86 3.2E-90 692.9 30.1 268 25-295 27-367 (390)
12 2gl6_A Creatine kinase; non-pr 100.0 1.2E-85 4E-90 692.5 27.5 269 26-297 27-368 (392)
13 2dt7_A Splicing factor 3A subu 26.4 25 0.00085 24.8 1.3 18 333-350 11-30 (38)
No 1
>1m15_A Arginine kinase, AK; creatine kinase, phosphagen kinase, transition state analog, adenosine triphosphate, transferas; HET: ARG ADP; 1.20A {Limulus polyphemus} SCOP: a.83.1.1 d.128.1.2 PDB: 1m80_A 3m10_A 1bg0_A* 1p50_A* 1sd0_A* 1p52_A* 1rl9_A* 2j1q_A
Probab=100.00 E-value=4.3e-94 Score=750.20 Aligned_cols=270 Identities=75% Similarity=1.277 Sum_probs=261.2
Q ss_pred ccccc------ccccc-cccc-----------ccccccCCCCCcccccCCchhHHhhhhhhhHHHHhhcCCCCCCCCCCC
Q psy5878 296 HTESV------GGVYD-ISNK-----------RRMGFENPDSGVGIYAPDAEAYIVFADLFDPIIEDYHKGFKKTDKHPP 357 (565)
Q Consensus 296 ~~~sl------~e~~~-l~~~-----------I~~gv~n~~~~vG~~A~D~esY~~F~~lfdpii~~~H~~~~~~~~h~~ 357 (565)
.|+|| ||+|+ ||+| |||||+|||++|||||||+|||+||++||||||++||+||+++++||+
T Consensus 22 ~~~s~~~k~lt~~~~~~lk~k~T~~g~tl~~~i~~gv~n~~~~vG~~A~D~esY~~F~~lfdpvI~~~H~g~~~~~~h~~ 101 (357)
T 1m15_A 22 DCKSLLKKHLTKDVFDSIKNKKTGMGATLLDVIQSGVENLDSGVGIYAPDAESYRTFGPLFDPIIDDYHGGFKLTDKHPP 101 (357)
T ss_dssp TCCCHHHHHCCHHHHHHHTTCBCTTCCBHHHHHHHHHHCTTCSSCCCCSSSTHHHHTHHHHHHHHHHHTTCCCTTCCCCC
T ss_pred ccccHHhhcCCHHHHHHhcccCCCCCCCHHHHHHhcccCCCCCCCeEecCHHHHHHHHHHhHHHHHHHcCCCCCcCCCCC
Confidence 46666 89999 9988 999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccCCCCCCCCeEEeeeecccccCCCCCCCCCCCHHHHHHHHHHHHHHhcCCccCCCCcEEeCCCCCHHHHHHH
Q psy5878 358 KNWGDVDSFANLDPNGEFVISTRVRCGRSLQGYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGQFYPLTGMTKEVQQKL 437 (565)
Q Consensus 358 ~~~~~~~~~~~~d~~~~~VlSsRVRl~RNl~g~~Fp~~ls~~er~~ve~~v~~al~~l~~~~~g~y~~L~~m~~~~~~~L 437 (565)
++|+..+.+.+.+|+++||+|||||+||||+||||||+||++||++|++++.+||.++.++++|+||+|++|++++|++|
T Consensus 102 ~d~~~~~~~~~~~p~~~~VlSSRVRlaRNl~g~~Fp~~ls~~e~~~ve~~v~~al~~l~g~~~g~y~~L~~m~~~~~~~L 181 (357)
T 1m15_A 102 KQWGDINTLVGLDPAGQFIISTRVRCGRSLQGYPFNPCLTAEQYKEMEEKVSSTLSSMEDELKGTYYPLTGMSKATQQQL 181 (357)
T ss_dssp CCCCCGGGCCBSCTTCSSEEEEEEEEEECBTTCCCGGGCCHHHHHHHHHHHHHHHTTCCGGGCEEEEESTTCCHHHHHHH
T ss_pred CCCcchhhccccCCCCCEEEeeeEEeeeccCCCCCCccCCHHHHHHHHHHHHHHHHhcccccCceEEEcccCCHHHHHHH
Confidence 88877666778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCcHhHHhcccCCCCCCceEEEEcCCCcEEEEEcCCCceEEEEEccCCCHHHHHHHHHHHHHHhhhcCCcee
Q psy5878 438 IDDHFLFKEGDRFLQAANACRFWPTGRGIYHNDNKTFLVWCNEEDHLRLISMQMGGDLGQVYRRLVSAVNDIEKRLPFSH 517 (565)
Q Consensus 438 ie~h~Lf~~~d~~l~~~g~~rdwP~grgI~~n~dk~f~vwVNeEDHLRIism~~G~~l~~~f~r~~~~~~~le~~l~Fa~ 517 (565)
+++||||+++||+|.++|++||||+|||||||+|++|+||||||||||||||++|++|++||+|++++++.||++++|||
T Consensus 182 ie~h~Lf~~~s~~L~~ag~~r~wp~~rgi~~n~d~~~~vwVNEEDHLRI~sm~~G~~l~~~~~r~~~~~~~lE~~l~FAf 261 (357)
T 1m15_A 182 IDDHFLFKEGDRFLQTANACRYWPTGRGIFHNDAKTFLVWVNEEDHLRIISMQKGGDLKTVYKRLVTAVDNIESKLPFSH 261 (357)
T ss_dssp HHTTCSCCSCCHHHHHTTCSTTTTTTCEEEEETTSSEEEEESSSSSEEEEEEEESSBHHHHHHHHHHHHHHHHTTSCBCE
T ss_pred HHcCCCCCCCCHHHHhccccCCCCCCceEEECCCCCEEEEEccCCeEEEEEecCCCCHHHHHHHHHHHHHHHHhhcCeee
Confidence 99999998889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeeccCCCCCCcceeEEEEEeccCcccChhHHHHHHHhcCcccC
Q psy5878 518 DDRLGFLTFCPTNLGTTVRASVHIKLPKLAADLSKLEEIAGRYNLQVR 565 (565)
Q Consensus 518 ~~~lGYLTscPtNlGTGlrasV~l~LP~L~~~~~~~~~i~~~lglq~R 565 (565)
|++||||||||||+|||||||||||||+|+++.++|.++|.++|||+|
T Consensus 262 ~~~lGYLTsCPtNlGTGLRaSV~l~LP~L~~~~~~~~~~~~klgL~vR 309 (357)
T 1m15_A 262 DDRFGFLTFCPTNLGTTMRASVHIQLPKLAKDRKVLEDIASKFNLQVR 309 (357)
T ss_dssp ETTTEECCSSGGGCBTCCEEEEEECCHHHHHSHHHHHHHHHHTTEEEE
T ss_pred cCCceeeeeCcccCCCccEEEEEEEcchhhhcHHHHHHHHHHcCEEEE
Confidence 999999999999999999999999999999994499999999999998
No 2
>3jpz_A Lombricine kinase; mixed alpha / beta, transferase; 1.95A {Urechis caupo} PDB: 3jq3_A*
Probab=100.00 E-value=2.4e-91 Score=731.62 Aligned_cols=266 Identities=39% Similarity=0.730 Sum_probs=247.9
Q ss_pred cccc-ccccc-cccc-----------ccccccCCCCCcccccCCchhHHhhhhhhhHHHHhhcCCCCCCCCCCCCCCCCC
Q psy5878 297 TESV-GGVYD-ISNK-----------RRMGFENPDSGVGIYAPDAEAYIVFADLFDPIIEDYHKGFKKTDKHPPKNWGDV 363 (565)
Q Consensus 297 ~~sl-~e~~~-l~~~-----------I~~gv~n~~~~vG~~A~D~esY~~F~~lfdpii~~~H~~~~~~~~h~~~~~~~~ 363 (565)
+|+| ||||+ ||+| |||||+||+++|||||||+|||+||++||||||++||+||+|+++||++||+..
T Consensus 22 ~k~Lt~~~~~~lk~k~T~~g~tl~~~I~~gv~np~~~vG~~AgD~esY~vF~~lfdpvI~~~H~g~~~~~~h~~~d~~~~ 101 (366)
T 3jpz_A 22 GRHLNFEMYQRLFGKKTAHGVTVDKVIQPSVDNFGNCIGLIAGDEESYEVFKELFDAVINEKHKGFGPNDSQPAPDLDAS 101 (366)
T ss_dssp HHHCCHHHHHHHTTCBCTTCCBHHHHHHHHHHCCSSCCCCCCSSTTHHHHTHHHHHHHHHHHTTSCCTTCCCCCCCCCGG
T ss_pred hhhCCHHHHHHHhCCCCCCCCcHHHHHHhccCCCCCCCCceeCChHHHHHHHHHHhHHHHHHhCCCCCcCCCCCCCCCcc
Confidence 3445 99999 9999 999999999999999999999999999999999999999999999998777532
Q ss_pred c-ccCCCCCCCCeEEeeeecccccCCCCCCCCCCCHHHHHHHHHHHHHHhcCCccCCCCcEEeCCCCCHHHHHHHHHcCC
Q psy5878 364 D-SFANLDPNGEFVISTRVRCGRSLQGYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGQFYPLTGMTKEVQQKLIDDHF 442 (565)
Q Consensus 364 ~-~~~~~d~~~~~VlSsRVRl~RNl~g~~Fp~~ls~~er~~ve~~v~~al~~l~~~~~g~y~~L~~m~~~~~~~Lie~h~ 442 (565)
+ ..+++| .+||+|||||+||||+||||||+||++||++|++++++||.++++++.|+||+|++|++++|++|+++||
T Consensus 102 ~l~~~~~D--~~~VlSSRVRlaRNl~g~~FP~~~s~~e~~~ve~~v~~al~~l~~~~~g~y~~L~~m~~~e~~~Lie~h~ 179 (366)
T 3jpz_A 102 KLVGGQFD--EKYVKSCRIRTGRGIRGLCYPPSCTRGERREVERVITTALAGLSGDLSGTYYPLSKMTPEQENQLIADHF 179 (366)
T ss_dssp GCSSCBCC--TTTEEEEEEEEEECBTTSCCTTTCCHHHHHHHHHHHHHHHTTCCGGGCEEEEEGGGCCHHHHHHHHHTTC
T ss_pred cccCCCCC--CceEEEeecceeeecCCCCCCCcCCHHHHHHHHHHHHHHHhcccccccccEeehhcCCHHHHHHHHHcCc
Confidence 2 223555 4999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCcHhHHhcccCCCCCCceEEEEcCCCcEEEEEcCCCceEEEEEccCCCHHHHHHHHHHHH----HHhhhc-CCce
Q psy5878 443 LF-KEGDRFLQAANACRFWPTGRGIYHNDNKTFLVWCNEEDHLRLISMQMGGDLGQVYRRLVSAV----NDIEKR-LPFS 516 (565)
Q Consensus 443 Lf-~~~d~~l~~~g~~rdwP~grgI~~n~dk~f~vwVNeEDHLRIism~~G~~l~~~f~r~~~~~----~~le~~-l~Fa 516 (565)
|| ++.||+|.++|++||||+|||||||+|++|+||||||||||||||++|++|++||+|+|++. +.|+++ ++||
T Consensus 180 Lf~~~~sp~L~~~g~~rdWp~~rgi~~n~d~~~~VwVNEEDHLRI~sm~~G~~l~~~~~r~~~~~~~ie~~l~~~~~~Fa 259 (366)
T 3jpz_A 180 LFQKPTGHLMVNSASVRDWPDARGIWHNNEKTFLIWINEEDHMRVISMQKGGNVKAVFERFGRGLNAIAEQMKKNGREYM 259 (366)
T ss_dssp CCCCCCSHHHHHTTTTTTTTTTCEEEEETTSCEEEEESSSSSEEEEEEEESSBHHHHHHHHHHHHHHHHHHHHTTTCCBC
T ss_pred CcCCCCCHHHHhCccccCCCCCceEEEcCCCCEEEEEcccceEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhcCccee
Confidence 99 56799999999999999999999999999999999999999999999999999999976555 445555 7899
Q ss_pred ecCCCeeeccCCCCCCcceeEEEEEeccCcccChhHHHHHHHhcCcccC
Q psy5878 517 HDDRLGFLTFCPTNLGTTVRASVHIKLPKLAADLSKLEEIAGRYNLQVR 565 (565)
Q Consensus 517 ~~~~lGYLTscPtNlGTGlrasV~l~LP~L~~~~~~~~~i~~~lglq~R 565 (565)
||++||||||||||+|||||||||||||+|++++ +|+++|.++|||+|
T Consensus 260 f~~~lGYLTscPtNlGTGLRAsV~l~LP~L~~~~-~~~~il~klgL~vR 307 (366)
T 3jpz_A 260 WNQRLGYLCACPSNLGTGLRASVHVQLHQLSKHP-KFEDIVVALQLQKR 307 (366)
T ss_dssp EETTTEECCSSGGGCBTCCEEEEEEECTTGGGST-THHHHHHHTTEEEE
T ss_pred ecCCcceEeeCCcccCcceEEEEEEEccccchhh-HHHHHHHHcCeEEe
Confidence 9999999999999999999999999999999998 99999999999997
No 3
>3ju5_A Arginine kinase, AK; reciprocating mechanism, negative cooperativity, phosphagen kinase, ATP-binding, nucleotide-binding, transferase; HET: MSE; 1.75A {Apostichopus japonicus} PDB: 3ju6_A*
Probab=100.00 E-value=2.4e-91 Score=731.73 Aligned_cols=264 Identities=46% Similarity=0.841 Sum_probs=247.8
Q ss_pred ccc-ccccc-cccc-----------ccccccCCCCCcccccCCchhHHhhhhhhhHHHHhhcCCCCCCCCCCCCCCCCCc
Q psy5878 298 ESV-GGVYD-ISNK-----------RRMGFENPDSGVGIYAPDAEAYIVFADLFDPIIEDYHKGFKKTDKHPPKNWGDVD 364 (565)
Q Consensus 298 ~sl-~e~~~-l~~~-----------I~~gv~n~~~~vG~~A~D~esY~~F~~lfdpii~~~H~~~~~~~~h~~~~~~~~~ 364 (565)
|+| ||||+ ||+| |||||+||+++|||||||+|||+||++||||||++||+||+|+++|| +|++..+
T Consensus 27 k~Lt~~~~~~lk~k~T~~g~tl~~~I~~gv~np~~~vG~~AgD~esY~vF~~lfdpvI~~~H~g~~~~~~h~-~d~~~~~ 105 (370)
T 3ju5_A 27 KYLTADMYAKLRDVATPSGYTLDRAIQNGVDNPDFHLGLLAGDEETYTVFADLFDPVIEEYHNGFKKTDNHK-TDLDASK 105 (370)
T ss_dssp HHCCHHHHHHHTTCCCTTCCCHHHHHHHHHTCTTCSSCCCCSSTTHHHHTHHHHHHHHHHHTTSCCTTCCCC-CCCCGGG
T ss_pred hhCCHHHHHHHcCCCCCCCCcHHHHHHhcccCCCCCCCceeCChHHHHHHHHHhhHHHHHHhCCCCCCcCCC-CCCChhh
Confidence 444 99999 9998 99999999999999999999999999999999999999999999999 5665433
Q ss_pred -ccCCCCCCCCeEEeeeecccccCCCCCCCCCCCHHHHHHHHHHHHHHhcCCccCCCCcEEeCCCCCHHHHHHHHHcCCC
Q psy5878 365 -SFANLDPNGEFVISTRVRCGRSLQGYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGQFYPLTGMTKEVQQKLIDDHFL 443 (565)
Q Consensus 365 -~~~~~d~~~~~VlSsRVRl~RNl~g~~Fp~~ls~~er~~ve~~v~~al~~l~~~~~g~y~~L~~m~~~~~~~Lie~h~L 443 (565)
..+++|| +||+|||||+||||+||||||+||++||++|++++++||.++++++.|+||+|++|++++|++|+|+|||
T Consensus 106 l~~~~~Dp--~~VlSSRVRlaRNl~g~~FP~~~s~~e~~~ve~~v~~al~~l~~~~~g~y~~L~~m~~~e~~~Lie~h~L 183 (370)
T 3ju5_A 106 ILDDVLDP--AYVISSRVRTGRNIRGMALSPHVCRSERRAIEKMVSEALNSLAADLKGKYYSLMKMDEKTQQQLIDDHFL 183 (370)
T ss_dssp SCCCBCCT--TTEEEEEEEEEECBTTSCCTTTCCHHHHHHHHHHHHHHHHTCCGGGCEEEEESSSCCHHHHHHHHHTTCC
T ss_pred ccCCCCCC--ceEEEeeeeeeeecCCCCCCCcCCHHHHHHHHHHHHHHHhcccccccCcEeehhcCCHHHHHHHHHcCCC
Confidence 2347777 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC-cHhHHhcccCCCCCCceEEEEcCCCcEEEEEcCCCceEEEEEccCCCHHHHHHHHHHHHHH----hhhc--CCce
Q psy5878 444 FKEG-DRFLQAANACRFWPTGRGIYHNDNKTFLVWCNEEDHLRLISMQMGGDLGQVYRRLVSAVND----IEKR--LPFS 516 (565)
Q Consensus 444 f~~~-d~~l~~~g~~rdwP~grgI~~n~dk~f~vwVNeEDHLRIism~~G~~l~~~f~r~~~~~~~----le~~--l~Fa 516 (565)
|+.+ +|+|.++|++|+||+|||||||+|++|+||||||||||||||++|++|++||+|+|++.++ |+++ ++||
T Consensus 184 F~~~~s~~L~~ag~~r~wp~~rgi~~n~dk~~~VwVNEEDHLRIism~~G~~l~~~~~r~~~~~~~ie~~l~~~~gl~FA 263 (370)
T 3ju5_A 184 FDRPVSRHFTSGGMARDFPDGRGIWHNDKKNFLVWINEEDHTRIISMQMGGNMKEVFERFTRGLTEVEKHIKDKTGKEFM 263 (370)
T ss_dssp CCCSCSHHHHHTTTTTTTTTTCEEEEETTSSEEEEESSSSSEEEEEEEESSBHHHHHHHHHHHHHHHHHHHHHHHSCCBC
T ss_pred cCCCCCHHHHhCCCccCCCCccEEEEcCCCCEEEEEcccceEEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhccCcceE
Confidence 9765 9999999999999999999999999999999999999999999999999999996555555 4555 9999
Q ss_pred ecCCCeeeccCCCCCCcceeEEEEEeccCcccChhHHHHHHHhcCcccC
Q psy5878 517 HDDRLGFLTFCPTNLGTTVRASVHIKLPKLAADLSKLEEIAGRYNLQVR 565 (565)
Q Consensus 517 ~~~~lGYLTscPtNlGTGlrasV~l~LP~L~~~~~~~~~i~~~lglq~R 565 (565)
||++||||||||||+|||||||||||||+|++++ +|+++|.++|||+|
T Consensus 264 f~~~lGYLTscPtNlGTGLRAsV~l~LP~L~~~~-~~~~il~klgLqvR 311 (370)
T 3ju5_A 264 KNDHLGFVLTCPSNLGTGVRCSVHAKLPHMAKDK-RFEEICTKMRLQKR 311 (370)
T ss_dssp EETTTEECCSSGGGCBTCCEEEEEEECHHHHTCT-THHHHHHHTTEEEE
T ss_pred ecCCceeEeeCCcccCcceEEEEEEEcccccchH-HHHHHHHHcCeeEe
Confidence 9999999999999999999999999999999998 99999999999997
No 4
>1m15_A Arginine kinase, AK; creatine kinase, phosphagen kinase, transition state analog, adenosine triphosphate, transferas; HET: ARG ADP; 1.20A {Limulus polyphemus} SCOP: a.83.1.1 d.128.1.2 PDB: 1m80_A 3m10_A 1bg0_A* 1p50_A* 1sd0_A* 1p52_A* 1rl9_A* 2j1q_A
Probab=100.00 E-value=5.2e-90 Score=719.45 Aligned_cols=281 Identities=76% Similarity=1.228 Sum_probs=270.7
Q ss_pred cCCHHHHHHHHhhcccccc-ccccchhhhcCCHHHHHHhhcccCCCCcccC-----------------------------
Q psy5878 16 MVDQATLDKLEAGFAKFQA-TESKSLLKKYLTKEIFDALKVKKTSFGSSLL----------------------------- 65 (565)
Q Consensus 16 ~~~~~~~~~~~~~~~~l~~-~~~~sl~~k~lt~~~~~~lk~~~t~~g~tl~----------------------------- 65 (565)
|+|++++++++++|++|++ .+|+|||+|||||++|++||+++|++|+||.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~k~lt~~~~~~lk~k~T~~g~tl~~~i~~gv~n~~~~vG~~A~D~esY~~F~~ 80 (357)
T 1m15_A 1 MVDQATLDKLEAGFKKLQEASDCKSLLKKHLTKDVFDSIKNKKTGMGATLLDVIQSGVENLDSGVGIYAPDAESYRTFGP 80 (357)
T ss_dssp -CCHHHHHHHHHHHHHHHHCTTCCCHHHHHCCHHHHHHHTTCBCTTCCBHHHHHHHHHHCTTCSSCCCCSSSTHHHHTHH
T ss_pred CCcHHHHHHHHHHHhhCccccccccHHhhcCCHHHHHHhcccCCCCCCCHHHHHHhcccCCCCCCCeEecCHHHHHHHHH
Confidence 7899999999999999975 4699999999999999999999999999984
Q ss_pred -----------------------------------CCCeEEEeeeeeeecCCCCCCCCCCCHHHHHHHHHHHHHHhcCcc
Q psy5878 66 -----------------------------------DGEFVISTRVRCGRSLQGYPFNPCLTEAQYKEMEEKVSSTLSGLE 110 (565)
Q Consensus 66 -----------------------------------~~~~VlSsRIRlaRNl~g~~Fp~~ls~~e~~~ve~~i~~al~~l~ 110 (565)
+++||+||||||||||+||||||+||++||++|+++|.+||.++.
T Consensus 81 lfdpvI~~~H~g~~~~~~h~~~d~~~~~~~~~~~p~~~~VlSSRVRlaRNl~g~~Fp~~ls~~e~~~ve~~v~~al~~l~ 160 (357)
T 1m15_A 81 LFDPIIDDYHGGFKLTDKHPPKQWGDINTLVGLDPAGQFIISTRVRCGRSLQGYPFNPCLTAEQYKEMEEKVSSTLSSME 160 (357)
T ss_dssp HHHHHHHHHTTCCCTTCCCCCCCCCCGGGCCBSCTTCSSEEEEEEEEEECBTTCCCGGGCCHHHHHHHHHHHHHHHTTCC
T ss_pred HhHHHHHHHcCCCCCcCCCCCCCCcchhhccccCCCCCEEEeeeEEeeeccCCCCCCccCCHHHHHHHHHHHHHHHHhcc
Confidence 358999999999999999999999999999999999999999999
Q ss_pred cccCCcEEeCCCCCHHHHHHHHhcCCCCCCCcHHHHhhhccCCCCCceEEEEcCCCcEEEEECCCCceEEEEEccCCCHH
Q psy5878 111 GELKGQFYPLTGMTKEVQQKLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNDNKTFLVWCNEEDHLRLISMQMGGDLG 190 (565)
Q Consensus 111 ~~~~g~y~~l~~m~~~~~~~Lie~h~lf~~~d~~l~~~g~~r~wp~grgi~~n~d~~~~v~VNeEDHLRI~s~~~G~~l~ 190 (565)
++++|+||+|++|++++|++|+++||||++.+++|.++|++|+||+|||||||+|++|+||||||||||||||++|++|+
T Consensus 161 g~~~g~y~~L~~m~~~~~~~Lie~h~Lf~~~s~~L~~ag~~r~wp~~rgi~~n~d~~~~vwVNEEDHLRI~sm~~G~~l~ 240 (357)
T 1m15_A 161 DELKGTYYPLTGMSKATQQQLIDDHFLFKEGDRFLQTANACRYWPTGRGIFHNDAKTFLVWVNEEDHLRIISMQKGGDLK 240 (357)
T ss_dssp GGGCEEEEESTTCCHHHHHHHHHTTCSCCSCCHHHHHTTCSTTTTTTCEEEEETTSSEEEEESSSSSEEEEEEEESSBHH
T ss_pred cccCceEEEcccCCHHHHHHHHHcCCCCCCCCHHHHhccccCCCCCCceEEECCCCCEEEEEccCCeEEEEEecCCCCHH
Confidence 88999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCcccCCCcccccCCCCCCCceeEEEEEeccccccChHHHHHHHHhcCeEeeeccCCCCCccC
Q psy5878 191 QVYRRLVSAVNDIEKRLPFSHDDRLGFLTFCPTNLGTTVRASVHIKLPKLAADLSKLEEIAGRYNLQVRGTAGEHTESVG 270 (565)
Q Consensus 191 ~~~~r~~~~~~~Le~~l~FA~~~~lGyLTscPtNlGTGlraSV~l~LP~L~~~~~~~~~i~~~~gl~~RG~~Ge~s~~~g 270 (565)
+||+|++++++.||++++||||++||||||||||+|||||||||||||+|+++..+|.++|.++|||+||+|||+|++.|
T Consensus 241 ~~~~r~~~~~~~lE~~l~FAf~~~lGYLTsCPtNlGTGLRaSV~l~LP~L~~~~~~~~~~~~klgL~vRG~~Ge~s~a~G 320 (357)
T 1m15_A 241 TVYKRLVTAVDNIESKLPFSHDDRFGFLTFCPTNLGTTMRASVHIQLPKLAKDRKVLEDIASKFNLQVRGTRGEHTESEG 320 (357)
T ss_dssp HHHHHHHHHHHHHHTTSCBCEETTTEECCSSGGGCBTCCEEEEEECCHHHHHSHHHHHHHHHHTTEEEEBTTBTTCCCBT
T ss_pred HHHHHHHHHHHHHHhhcCeeecCCceeeeeCcccCCCccEEEEEEEcchhhhcHHHHHHHHHHcCEEEEecCCCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999434999999999999999999999999
Q ss_pred CEEEeccCcCCCCCHHHHHHhhcccc
Q psy5878 271 GVYDISNKRRMGLTEFEAVRGTAGEH 296 (565)
Q Consensus 271 ~iy~ISN~~~LG~sE~e~v~~l~~~~ 296 (565)
++|||||++|||+||+|+|+.|+++-
T Consensus 321 ~iy~ISN~~~LG~sE~eiv~~l~~~v 346 (357)
T 1m15_A 321 GVYDISNKRRLGLTEYQAVREMQDGI 346 (357)
T ss_dssp TBEEEEECCCSSSCHHHHHHHHHHHH
T ss_pred CEEEEECccccCCCHHHHHHHHHHHH
Confidence 99999999999999999999999873
No 5
>3l2f_A Glycocyamine kinase beta chain; phosphagen kinase, transition state ANA kinase, transferase; HET: ADP; 2.30A {Namalycastis SP} PDB: 3l2e_B 3l2d_A* 3l2g_A* 3l2e_A
Probab=100.00 E-value=4.9e-90 Score=725.33 Aligned_cols=265 Identities=40% Similarity=0.767 Sum_probs=248.3
Q ss_pred cccc-ccccc-cccc-----------ccccccCCC-----CCcccccCCchhHHhhhhhhhHHHHhhcCCCCCCCCCCCC
Q psy5878 297 TESV-GGVYD-ISNK-----------RRMGFENPD-----SGVGIYAPDAEAYIVFADLFDPIIEDYHKGFKKTDKHPPK 358 (565)
Q Consensus 297 ~~sl-~e~~~-l~~~-----------I~~gv~n~~-----~~vG~~A~D~esY~~F~~lfdpii~~~H~~~~~~~~h~~~ 358 (565)
+|+| ||||+ ||+| |||||+||+ ++|||||||+|||+||++||||||++||+ |+|+++||++
T Consensus 42 ~k~Lt~~~~~~lk~k~T~~g~tl~~~Iq~gv~np~~~p~~~~vG~~AgD~esY~vF~~lfdpvI~~~H~-~~~~~~h~~~ 120 (390)
T 3l2f_A 42 ASQLTKELYEKYWDKVTPNGVTFDKCIQTGVDNPGNKFYGKKTGCVFGDEYSYECYKEFFDKCIEEIHH-FKPSDKHPAP 120 (390)
T ss_dssp HHHCCHHHHHHHTTCCCTTSCCHHHHHHHHHHCSCCSSSSCBCCCCCSSTTHHHHTHHHHHHHHHHHHC-CCTTCCCCCC
T ss_pred hhhCCHHHHHHHhCCCCCCCCcHHHHHHhhccCCCCCcccccccceeCChHHHHHHHHHHhHHHHHHhC-CCCcccCCCC
Confidence 3455 99999 9999 999999999 89999999999999999999999999998 9999999987
Q ss_pred CCCCCc-ccCCCCCCCCeEEeeeecccccCCCCCCCCCCCHHHHHHHHHHHHHHhcCCccCCCCcEEeCCCCCHHHHHHH
Q psy5878 359 NWGDVD-SFANLDPNGEFVISTRVRCGRSLQGYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGQFYPLTGMTKEVQQKL 437 (565)
Q Consensus 359 ~~~~~~-~~~~~d~~~~~VlSsRVRl~RNl~g~~Fp~~ls~~er~~ve~~v~~al~~l~~~~~g~y~~L~~m~~~~~~~L 437 (565)
||+..+ ..+++|| +||+|||||+||||+||||||+||++||++|++++++||.++++++.|+||+|++|++++|++|
T Consensus 121 d~~~~~l~~~~~D~--~~VlSSRVRlaRNl~g~~FP~~~s~~er~~ve~~v~~aL~~l~~~~~g~y~~L~~m~~~e~~~L 198 (390)
T 3l2f_A 121 DLDHNKLVGGVFED--KYVKSCRIRCGRSVKGVCLPPAMSRAERRLVEKVVSDALGGLKGDLAGKYYPLTTMNEKDQEQL 198 (390)
T ss_dssp CCCGGGCCCCCCCT--TTEEEEEEEEEECBTTSCCTTTCCHHHHHHHHHHHHHHGGGCCGGGCEEEEESTTSCHHHHHHH
T ss_pred CCCcccccCCCCCC--ceEEEeeeeEEEecCCCCCCccCCHHHHHHHHHHHHHHHhcccccccccEeehhcCCHHHHHHH
Confidence 776533 2346777 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCC-CCCcHhHHhcccCCCCCCceEEEEcCCCcEEEEEcCCCceEEEEEccCCCHHHHHHHHHHHHHH----hhhc
Q psy5878 438 IDDHFLF-KEGDRFLQAANACRFWPTGRGIYHNDNKTFLVWCNEEDHLRLISMQMGGDLGQVYRRLVSAVND----IEKR 512 (565)
Q Consensus 438 ie~h~Lf-~~~d~~l~~~g~~rdwP~grgI~~n~dk~f~vwVNeEDHLRIism~~G~~l~~~f~r~~~~~~~----le~~ 512 (565)
+|+|||| ++++|+|.++|++|+||+|||||||+|++|+||||||||||||||++|++|++||+|+|++.++ |+++
T Consensus 199 ie~H~LF~k~~sp~l~~ag~~r~wp~grgI~~n~dktflVwVNEEDHLRIism~~G~~l~~vf~r~~~~~~~ie~~l~~~ 278 (390)
T 3l2f_A 199 IEDHFLFEKPTGALLTTSGCARDWPDGRGIWHNNEKNFLVWINEEDHIRVISMQKGGDLKAVFSRFARGLLEVERLMKEC 278 (390)
T ss_dssp HHTTSSCCCSCCHHHHHTTTTTTTTTTCEEEEESSSSEEEEESSSSSEEEEEEEESSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHcCcccCCCCCHHHHhhhccccCCCceEEEEcCCCCEEEEEccCCcEEEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999 6779999999999999999999999999999999999999999999999999999996655555 4445
Q ss_pred -CCceecCCCeeeccCCCCCCcceeEEEEEeccCcccChhHHHHHHHhcCcccC
Q psy5878 513 -LPFSHDDRLGFLTFCPTNLGTTVRASVHIKLPKLAADLSKLEEIAGRYNLQVR 565 (565)
Q Consensus 513 -l~Fa~~~~lGYLTscPtNlGTGlrasV~l~LP~L~~~~~~~~~i~~~lglq~R 565 (565)
++||||++||||||||||+|||||||||||||+|++++ +|+++|.++|||+|
T Consensus 279 gl~FAfd~~lGYLTsCPtNlGTGLRASV~lhLP~L~~~~-~~~~il~klgLqvR 331 (390)
T 3l2f_A 279 GHGLMHNDRLGYICTCPTNMGTVVRASVHLRLAFLEKHP-RFDEMLGKLRLGKR 331 (390)
T ss_dssp TCCBCEETTTEECCSSTTSCBTCEEEEEEEECTTGGGCT-THHHHHHHTTEEEE
T ss_pred CcceeecCCcceEecCCcccCcceEEEEEEEccccchhh-HHHHHHHHcCeEEe
Confidence 78999999999999999999999999999999999998 99999999999997
No 6
>1qh4_A Creatine kinase; cancer, cellular energy metabolism, guanidino kinase, neurodegenerative disorders, transferase; 1.41A {Gallus gallus} SCOP: a.83.1.1 d.128.1.2 PDB: 3b6r_A* 3drb_A* 3dre_A 1g0w_A 1i0e_A 1u6r_A* 1vrp_A* 2crk_A
Probab=100.00 E-value=3.4e-90 Score=724.45 Aligned_cols=261 Identities=45% Similarity=0.815 Sum_probs=246.5
Q ss_pred ccccc-cccc-----------ccccccCCC----CCcccccCCchhHHhhhhhhhHHHHhhcCCCCCCCCCCCCCCCC--
Q psy5878 301 GGVYD-ISNK-----------RRMGFENPD----SGVGIYAPDAEAYIVFADLFDPIIEDYHKGFKKTDKHPPKNWGD-- 362 (565)
Q Consensus 301 ~e~~~-l~~~-----------I~~gv~n~~----~~vG~~A~D~esY~~F~~lfdpii~~~H~~~~~~~~h~~~~~~~-- 362 (565)
||+|+ ||+| |||||+||+ ++|||||||+|||+||++||||||++||+||+++++||+ +|+.
T Consensus 35 ~~~~~~lk~k~T~~g~tl~~~I~~gv~n~~~~~~~~vG~~A~D~esY~~F~~lfdpvI~~~H~g~~~~~~h~~-d~~~~~ 113 (380)
T 1qh4_A 35 LDLYKKLRDRQTSSGFTLDDVIQTGVDNPGHPFIMTVGCVAGDEESYEVFKELFDPVIEDRHGGYKPTDEHKT-DLNADN 113 (380)
T ss_dssp HHHHHHHTTCCCTTCCCHHHHHHHHHHCCCCSSSCBCCCCCSSTTHHHHTHHHHHHHHHHHTTSCCTTCCCCC-CCCGGG
T ss_pred HHHHHHhccccCCCCCcHHHHHHhcccCCCCcccCCcceEecCHHHHHHHHHHhHHHHHHHcCCCCCCCCCCC-CCChhh
Confidence 99999 9988 999999999 679999999999999999999999999999999999987 4532
Q ss_pred CcccCCCCCCCCeEEeeeecccccCCCCCCCCCCCHHHHHHHHHHHHHHhcCCccCCCCcEEeCCCCCHHHHHHHHHcCC
Q psy5878 363 VDSFANLDPNGEFVISTRVRCGRSLQGYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGQFYPLTGMTKEVQQKLIDDHF 442 (565)
Q Consensus 363 ~~~~~~~d~~~~~VlSsRVRl~RNl~g~~Fp~~ls~~er~~ve~~v~~al~~l~~~~~g~y~~L~~m~~~~~~~Lie~h~ 442 (565)
+....++|| +||+||||||||||+||||||+||++||++|++++++||.++++++.|+||+|++|++++|++|+|+||
T Consensus 114 l~~~~~~d~--~~VlSSRVRlaRNl~g~~FP~~ls~~e~~~ve~~v~~al~~l~g~~~g~y~~L~~m~~~e~~~Lie~h~ 191 (380)
T 1qh4_A 114 LQGGDDLDP--NYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLSVEALGSLGGDLKGKYYALRNMTDAEQQQLIDDHF 191 (380)
T ss_dssp SCSCSCCCT--TTEEEEEEEEEECBTTSCCTTTCCHHHHHHHHHHHHHHHTTCCGGGCEEEEEGGGCCHHHHHHHHHTTC
T ss_pred ccCccCCCC--CEEEeeeceeeccCCCCCCCccCCHHHHHHHHHHHHHHHhccccccCceEEEhhcCCHHHHHHHHHcCC
Confidence 212235555 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC-CcHhHHhcccCCCCCCceEEEEcCCCcEEEEEcCCCceEEEEEccCCCHHHHHHHHHHHHHHhhh-----cCCce
Q psy5878 443 LFKE-GDRFLQAANACRFWPTGRGIYHNDNKTFLVWCNEEDHLRLISMQMGGDLGQVYRRLVSAVNDIEK-----RLPFS 516 (565)
Q Consensus 443 Lf~~-~d~~l~~~g~~rdwP~grgI~~n~dk~f~vwVNeEDHLRIism~~G~~l~~~f~r~~~~~~~le~-----~l~Fa 516 (565)
||++ .+|+|.++|++|+||+|||||||+|++|+||||||||||||||++|++|++||+|++++++.||+ .++||
T Consensus 192 Lf~~~~sp~L~~ag~~r~Wp~grgi~~n~d~t~~vwVNEEDHLRIism~~G~~L~~v~~r~~~~~~~lE~~l~~~~l~FA 271 (380)
T 1qh4_A 192 LFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRFCTGLTQIETLFKSKNYEFM 271 (380)
T ss_dssp CCCCCCCHHHHTTTTTTTTTTTCEEEEETTSSEEEEESSSSSEEEEEEEESSCHHHHHHHHHHHHHHHHHHHHHTTCCBC
T ss_pred CCCCCCCHHHHhcccccCCCCCceEEEeCCCceEEEEcCCCeEEEEEeecCCCHHHHHHHHHHHHHHHHHHHhhcCCCee
Confidence 9976 58899999999999999999999999999999999999999999999999999999999999997 46899
Q ss_pred ecCCCeeeccCCCCCCcceeEEEEEeccCcccChhHHHHHHHhcCcccC
Q psy5878 517 HDDRLGFLTFCPTNLGTTVRASVHIKLPKLAADLSKLEEIAGRYNLQVR 565 (565)
Q Consensus 517 ~~~~lGYLTscPtNlGTGlrasV~l~LP~L~~~~~~~~~i~~~lglq~R 565 (565)
||++||||||||||+|||||||||||||+|++++ +|+++|.++|||+|
T Consensus 272 f~~~lGYLTsCPtNlGTGLRASV~lhLP~L~~~~-~~~~il~klgL~vR 319 (380)
T 1qh4_A 272 WNPHLGYILTCPSNLGTGLRAGVHIKLPNLGKHE-KFGEVLKRLRLQKR 319 (380)
T ss_dssp EETTTEECCSSGGGCBTCCEEEEEEECHHHHTST-THHHHHHHHTEEEE
T ss_pred ecCCceeeeeCCCcCCcceEEEEEEEccccccch-hHHHHHHHcCeEEe
Confidence 9999999999999999999999999999999998 99999999999997
No 7
>2gl6_A Creatine kinase; non-protein kinase, ADP, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP; 2.30A {Homo sapiens} PDB: 1crk_A 1qk1_A
Probab=100.00 E-value=4.4e-89 Score=718.49 Aligned_cols=261 Identities=43% Similarity=0.806 Sum_probs=229.0
Q ss_pred ccccc-cccc-----------ccccccCCC----CCcccccCCchhHHhhhhhhhHHHHhhcCCCCCCC-CCCCCCCCCC
Q psy5878 301 GGVYD-ISNK-----------RRMGFENPD----SGVGIYAPDAEAYIVFADLFDPIIEDYHKGFKKTD-KHPPKNWGDV 363 (565)
Q Consensus 301 ~e~~~-l~~~-----------I~~gv~n~~----~~vG~~A~D~esY~~F~~lfdpii~~~H~~~~~~~-~h~~~~~~~~ 363 (565)
||+|+ ||+| |||||+||+ ++|||||||+|||+||++||||||++||+||++++ +||+ +|+..
T Consensus 46 ~~~~~~lk~k~T~~g~tl~~~I~sgv~n~~~~~~~~vG~~A~D~esY~~F~~lfdpvI~~~H~g~~~~~~~h~~-d~~~~ 124 (392)
T 2gl6_A 46 PAIYAKLRNKVTPNGYTLDQCIQTGVDNPGHPFIKTVGMVAGDEESYEVFADLFDPVIKLRHNGYDPRVMKHTT-DLDAS 124 (392)
T ss_dssp HHHHHHHTTCBCTTCCBHHHHHHHHHHCC------CCCCCCSSTTHHHHTHHHHHHHHHHHTTTCCTTTCCCCC-CCCTT
T ss_pred HHHHHHhhcccCCCCCcHHHHHHhcccCCCCcccCCCceecCCHHHHHHHHHHhHHHHHHHcCCCCccccCCCC-CCChh
Confidence 99999 9988 999999999 67999999999999999999999999999999998 7775 55432
Q ss_pred c-ccCCCCCCCCeEEeeeecccccCCCCCCCCCCCHHHHHHHHHHHHHHhcCCccCCCCcEEeCCCCCHHHHHHHHHcCC
Q psy5878 364 D-SFANLDPNGEFVISTRVRCGRSLQGYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGQFYPLTGMTKEVQQKLIDDHF 442 (565)
Q Consensus 364 ~-~~~~~d~~~~~VlSsRVRl~RNl~g~~Fp~~ls~~er~~ve~~v~~al~~l~~~~~g~y~~L~~m~~~~~~~Lie~h~ 442 (565)
+ ..+++|| +||+||||||||||+||||||+||++||++|++++.+||.++++++.|+||+|++|++++|++|+++||
T Consensus 125 ~l~~~~~d~--~~VlSSRVRlaRNl~g~~FP~~ls~~e~~~ve~~v~~al~~l~g~~~g~y~~L~~m~~~e~~~Lie~h~ 202 (392)
T 2gl6_A 125 KITQGQFDE--HYVLSSRVRTGRSIRGLSLPPACTRAERREVENVAITALEGLKGDLAGRYYKLSEMTEQDQQRLIDDHF 202 (392)
T ss_dssp C----------------CEEEEECBTTSCCTTTCCHHHHHHHHHHHHHHHHTCCGGGCEEEEESTTSCHHHHHHHHHTTS
T ss_pred hccCCCCCC--CEEEeeeeeeeeecCCCCCCccCCHHHHHHHHHHHHHHHhccCcccCcEEEEcccCCHHHHHHHHHcCC
Confidence 2 2346666 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC-CcHhHHhcccCCCCCCceEEEEcCCCcEEEEEcCCCceEEEEEccCCCHHHHHHHHHHHHHHhhh-----cCCce
Q psy5878 443 LFKE-GDRFLQAANACRFWPTGRGIYHNDNKTFLVWCNEEDHLRLISMQMGGDLGQVYRRLVSAVNDIEK-----RLPFS 516 (565)
Q Consensus 443 Lf~~-~d~~l~~~g~~rdwP~grgI~~n~dk~f~vwVNeEDHLRIism~~G~~l~~~f~r~~~~~~~le~-----~l~Fa 516 (565)
||++ .+|+|.++|++|+||+|||||||+|++|+||||||||||||||++|++|++||+|++++++.||+ .++||
T Consensus 203 Lf~~~~s~~L~~ag~~r~Wp~grgI~~n~dkt~~VwVNEEDHLRIism~~G~~L~~v~~r~~~~~~~ie~~l~~~~l~FA 282 (392)
T 2gl6_A 203 LFDKPVSPLLTCAGMARDWPDARGIWHNYDKTFLIWINEEDHTRVISMEKGGNMKRVFERFCRGLKEVERLIQERGWEFM 282 (392)
T ss_dssp SCCCSCCHHHHTTTTTTTTTTTCEEEEETTSSEEEEESSSSSEEEEEC----CHHHHHHHHHHHHHHHHHHHHHTTCCBC
T ss_pred CCCCCCCHHHHhcccccCCCCCceEEEcCCCcEEEEEcccceEEEEEecCCCCHHHHHHHHHHHHHHHHHHHHhcCCcee
Confidence 9976 58899999999999999999999999999999999999999999999999999999966666554 67899
Q ss_pred ecCCCeeeccCCCCCCcceeEEEEEeccCcccChhHHHHHHHhcCcccC
Q psy5878 517 HDDRLGFLTFCPTNLGTTVRASVHIKLPKLAADLSKLEEIAGRYNLQVR 565 (565)
Q Consensus 517 ~~~~lGYLTscPtNlGTGlrasV~l~LP~L~~~~~~~~~i~~~lglq~R 565 (565)
||++||||||||||+|||||||||||||+|++++ +|+++|.++|||+|
T Consensus 283 fd~~lGYLTsCPtNlGTGLRASV~lhLP~L~~~~-~~~~il~klgLqvR 330 (392)
T 2gl6_A 283 WNERLGYILTCPSNLGTGLRAGVHVRIPKLSKDP-RFSKILENLRLQKR 330 (392)
T ss_dssp EETTTEECCSSGGGCBTCCEEEEEEECHHHHHST-THHHHHHHTTEEEE
T ss_pred ecCCceeeeeCCCCCCcceEEEEEEEccccccch-hHHHHHHHcCeEEE
Confidence 9999999999999999999999999999999998 99999999999997
No 8
>3ju5_A Arginine kinase, AK; reciprocating mechanism, negative cooperativity, phosphagen kinase, ATP-binding, nucleotide-binding, transferase; HET: MSE; 1.75A {Apostichopus japonicus} PDB: 3ju6_A*
Probab=100.00 E-value=3.8e-87 Score=700.05 Aligned_cols=268 Identities=47% Similarity=0.802 Sum_probs=251.7
Q ss_pred HHhhccccccccccchhhhcCCHHHHHHhhcccCCCCcccC---------------------------------------
Q psy5878 25 LEAGFAKFQATESKSLLKKYLTKEIFDALKVKKTSFGSSLL--------------------------------------- 65 (565)
Q Consensus 25 ~~~~~~~l~~~~~~sl~~k~lt~~~~~~lk~~~t~~g~tl~--------------------------------------- 65 (565)
.++.||+|. +|+|+|+|||||++|++||+++|++|+||+
T Consensus 11 ~~~~~p~l~--~~~~~~~k~Lt~~~~~~lk~k~T~~g~tl~~~I~~gv~np~~~vG~~AgD~esY~vF~~lfdpvI~~~H 88 (370)
T 3ju5_A 11 AKDDFPNFE--GHKSLLSKYLTADMYAKLRDVATPSGYTLDRAIQNGVDNPDFHLGLLAGDEETYTVFADLFDPVIEEYH 88 (370)
T ss_dssp HHHHSCCCT--TCCSHHHHHCCHHHHHHHTTCCCTTCCCHHHHHHHHHTCTTCSSCCCCSSTTHHHHTHHHHHHHHHHHT
T ss_pred hhhcCCccc--ccccHhhhhCCHHHHHHHcCCCCCCCCcHHHHHHhcccCCCCCCCceeCChHHHHHHHHHhhHHHHHHh
Confidence 578899994 899999999999999999999999999995
Q ss_pred -----------------------CCCeEEEeeeeeeecCCCCCCCCCCCHHHHHHHHHHHHHHhcCcccccCCcEEeCCC
Q psy5878 66 -----------------------DGEFVISTRVRCGRSLQGYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGQFYPLTG 122 (565)
Q Consensus 66 -----------------------~~~~VlSsRIRlaRNl~g~~Fp~~ls~~e~~~ve~~i~~al~~l~~~~~g~y~~l~~ 122 (565)
|.+||+||||||||||+||||||+||++||++|+++|.+||.++++++.|+||+|++
T Consensus 89 ~g~~~~~~h~~d~~~~~l~~~~~Dp~~VlSSRVRlaRNl~g~~FP~~~s~~e~~~ve~~v~~al~~l~~~~~g~y~~L~~ 168 (370)
T 3ju5_A 89 NGFKKTDNHKTDLDASKILDDVLDPAYVISSRVRTGRNIRGMALSPHVCRSERRAIEKMVSEALNSLAADLKGKYYSLMK 168 (370)
T ss_dssp TSCCTTCCCCCCCCGGGSCCCBCCTTTEEEEEEEEEECBTTSCCTTTCCHHHHHHHHHHHHHHHHTCCGGGCEEEEESSS
T ss_pred CCCCCCcCCCCCCChhhccCCCCCCceEEEeeeeeeeecCCCCCCCcCCHHHHHHHHHHHHHHHhcccccccCcEeehhc
Confidence 458999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCCCC-cHHHHhhhccCCCCCceEEEEcCCCcEEEEECCCCceEEEEEccCCCHHHHHHH----HH
Q psy5878 123 MTKEVQQKLIDDHFLFKEG-DRFLQAANACRFWPTGRGIYHNDNKTFLVWCNEEDHLRLISMQMGGDLGQVYRR----LV 197 (565)
Q Consensus 123 m~~~~~~~Lie~h~lf~~~-d~~l~~~g~~r~wp~grgi~~n~d~~~~v~VNeEDHLRI~s~~~G~~l~~~~~r----~~ 197 (565)
|++++|++|+|+||||+++ +++|.++|++|+||++||||||+|++|+||||||||||||||++|++|++||+| +.
T Consensus 169 m~~~e~~~Lie~h~LF~~~~s~~L~~ag~~r~wp~~rgi~~n~dk~~~VwVNEEDHLRIism~~G~~l~~~~~r~~~~~~ 248 (370)
T 3ju5_A 169 MDEKTQQQLIDDHFLFDRPVSRHFTSGGMARDFPDGRGIWHNDKKNFLVWINEEDHTRIISMQMGGNMKEVFERFTRGLT 248 (370)
T ss_dssp CCHHHHHHHHHTTCCCCCSCSHHHHHTTTTTTTTTTCEEEEETTSSEEEEESSSSSEEEEEEEESSBHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCcCCCCCHHHHhCCCccCCCCccEEEEcCCCCEEEEEcccceEEEEEEecCCCHHHHHHHHHHHHH
Confidence 9999999999999999988 889999999999999999999999999999999999999999999999999999 55
Q ss_pred HHHHHHhhc--CCCcccCCCcccccCCCCCCCceeEEEEEeccccccChHHHHHHHHhcCeEeeeccCCCCCccCCEEEe
Q psy5878 198 SAVNDIEKR--LPFSHDDRLGFLTFCPTNLGTTVRASVHIKLPKLAADLSKLEEIAGRYNLQVRGTAGEHTESVGGVYDI 275 (565)
Q Consensus 198 ~~~~~Le~~--l~FA~~~~lGyLTscPtNlGTGlraSV~l~LP~L~~~~~~~~~i~~~~gl~~RG~~Ge~s~~~g~iy~I 275 (565)
++++.|+++ ++||||++||||||||||+|||||||||||||+|+++++ |+++|.++|||+||+|||+|+++|++|||
T Consensus 249 ~ie~~l~~~~gl~FAf~~~lGYLTscPtNlGTGLRAsV~l~LP~L~~~~~-~~~il~klgLqvRG~~Ge~s~a~G~iydI 327 (370)
T 3ju5_A 249 EVEKHIKDKTGKEFMKNDHLGFVLTCPSNLGTGVRCSVHAKLPHMAKDKR-FEEICTKMRLQKRGTSGEFTESVGGVYDI 327 (370)
T ss_dssp HHHHHHHHHHSCCBCEETTTEECCSSGGGCBTCCEEEEEEECHHHHTCTT-HHHHHHHTTEEEEECC------CTTEEEE
T ss_pred HHHHHHHhccCcceEecCCceeEeeCCcccCcceEEEEEEEcccccchHH-HHHHHHHcCeeEeccCCCCCccCCCEEEE
Confidence 556666666 999999999999999999999999999999999999998 99999999999999999999999999999
Q ss_pred ccCcCCCCCHHHHHHhhccc
Q psy5878 276 SNKRRMGLTEFEAVRGTAGE 295 (565)
Q Consensus 276 SN~~~LG~sE~e~v~~l~~~ 295 (565)
||++|||+||+|+|+.|+++
T Consensus 328 SN~~~LG~SE~eiv~~l~~~ 347 (370)
T 3ju5_A 328 SNLDRLGSSEVEQVNCVIKG 347 (370)
T ss_dssp EESCCSSSCHHHHHHHHHHH
T ss_pred eCcccCCCCHHHHHHHHHHH
Confidence 99999999999999999988
No 9
>3jpz_A Lombricine kinase; mixed alpha / beta, transferase; 1.95A {Urechis caupo} PDB: 3jq3_A*
Probab=100.00 E-value=1.3e-86 Score=695.94 Aligned_cols=268 Identities=40% Similarity=0.719 Sum_probs=256.3
Q ss_pred HHhhccccccccccchhhhcCCHHHHHHhhcccCCCCcccC---------------------------------------
Q psy5878 25 LEAGFAKFQATESKSLLKKYLTKEIFDALKVKKTSFGSSLL--------------------------------------- 65 (565)
Q Consensus 25 ~~~~~~~l~~~~~~sl~~k~lt~~~~~~lk~~~t~~g~tl~--------------------------------------- 65 (565)
.++.||+|. +|+|+|+|||||++|++||+++|++|+||+
T Consensus 7 ~~~~~p~l~--~~~~~~~k~Lt~~~~~~lk~k~T~~g~tl~~~I~~gv~np~~~vG~~AgD~esY~vF~~lfdpvI~~~H 84 (366)
T 3jpz_A 7 AKANFPDYA--NHGCVVGRHLNFEMYQRLFGKKTAHGVTVDKVIQPSVDNFGNCIGLIAGDEESYEVFKELFDAVINEKH 84 (366)
T ss_dssp HHHHCCCCT--TCCCHHHHHCCHHHHHHHTTCBCTTCCBHHHHHHHHHHCCSSCCCCCCSSTTHHHHTHHHHHHHHHHHT
T ss_pred chhhCcCcc--ccccHhhhhCCHHHHHHHhCCCCCCCCcHHHHHHhccCCCCCCCCceeCChHHHHHHHHHHhHHHHHHh
Confidence 578899995 899999999999999999999999999995
Q ss_pred ------------------------CCCeEEEeeeeeeecCCCCCCCCCCCHHHHHHHHHHHHHHhcCcccccCCcEEeCC
Q psy5878 66 ------------------------DGEFVISTRVRCGRSLQGYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGQFYPLT 121 (565)
Q Consensus 66 ------------------------~~~~VlSsRIRlaRNl~g~~Fp~~ls~~e~~~ve~~i~~al~~l~~~~~g~y~~l~ 121 (565)
|++||+||||||||||+||||||+||++||++|+++|.+||.++++++.|+||+|+
T Consensus 85 ~g~~~~~~h~~~d~~~~~l~~~~~D~~~VlSSRVRlaRNl~g~~FP~~~s~~e~~~ve~~v~~al~~l~~~~~g~y~~L~ 164 (366)
T 3jpz_A 85 KGFGPNDSQPAPDLDASKLVGGQFDEKYVKSCRIRTGRGIRGLCYPPSCTRGERREVERVITTALAGLSGDLSGTYYPLS 164 (366)
T ss_dssp TSCCTTCCCCCCCCCGGGCSSCBCCTTTEEEEEEEEEECBTTSCCTTTCCHHHHHHHHHHHHHHHTTCCGGGCEEEEEGG
T ss_pred CCCCCcCCCCCCCCCcccccCCCCCCceEEEeecceeeecCCCCCCCcCCHHHHHHHHHHHHHHHhcccccccccEeehh
Confidence 36899999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhcCCCCCCC-cHHHHhhhccCCCCCceEEEEcCCCcEEEEECCCCceEEEEEccCCCHHHHHHHHH---
Q psy5878 122 GMTKEVQQKLIDDHFLFKEG-DRFLQAANACRFWPTGRGIYHNDNKTFLVWCNEEDHLRLISMQMGGDLGQVYRRLV--- 197 (565)
Q Consensus 122 ~m~~~~~~~Lie~h~lf~~~-d~~l~~~g~~r~wp~grgi~~n~d~~~~v~VNeEDHLRI~s~~~G~~l~~~~~r~~--- 197 (565)
+|++++|++|+|+||||+++ +++|.++|++|+||++||||||+|++|+||||||||||||||++|++|++||+|++
T Consensus 165 ~m~~~e~~~Lie~h~Lf~~~~sp~L~~~g~~rdWp~~rgi~~n~d~~~~VwVNEEDHLRI~sm~~G~~l~~~~~r~~~~~ 244 (366)
T 3jpz_A 165 KMTPEQENQLIADHFLFQKPTGHLMVNSASVRDWPDARGIWHNNEKTFLIWINEEDHMRVISMQKGGNVKAVFERFGRGL 244 (366)
T ss_dssp GCCHHHHHHHHHTTCCCCCCCSHHHHHTTTTTTTTTTCEEEEETTSCEEEEESSSSSEEEEEEEESSBHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCcCcCCCCCHHHHhCccccCCCCCceEEEcCCCCEEEEEcccceEEEEEecCCCCHHHHHHHHHHHH
Confidence 99999999999999999654 78999999999999999999999999999999999999999999999999999965
Q ss_pred -HHHHHHhhc-CCCcccCCCcccccCCCCCCCceeEEEEEeccccccChHHHHHHHHhcCeEeeeccCCCCCccCCEEEe
Q psy5878 198 -SAVNDIEKR-LPFSHDDRLGFLTFCPTNLGTTVRASVHIKLPKLAADLSKLEEIAGRYNLQVRGTAGEHTESVGGVYDI 275 (565)
Q Consensus 198 -~~~~~Le~~-l~FA~~~~lGyLTscPtNlGTGlraSV~l~LP~L~~~~~~~~~i~~~~gl~~RG~~Ge~s~~~g~iy~I 275 (565)
++++.|+++ ++||||++||||||||||+|||||||||||||+|+++++ |+++|.++|||+||+|||+|+++|++|||
T Consensus 245 ~~ie~~l~~~~~~Faf~~~lGYLTscPtNlGTGLRAsV~l~LP~L~~~~~-~~~il~klgL~vRG~~Ge~s~a~G~vydI 323 (366)
T 3jpz_A 245 NAIAEQMKKNGREYMWNQRLGYLCACPSNLGTGLRASVHVQLHQLSKHPK-FEDIVVALQLQKRGTGGEHTAAVDDVYDI 323 (366)
T ss_dssp HHHHHHHHTTTCCBCEETTTEECCSSGGGCBTCCEEEEEEECTTGGGSTT-HHHHHHHTTEEEEBTTBTTCCCGGGEEEE
T ss_pred HHHHHHHhhcCcceeecCCcceEeeCCcccCcceEEEEEEEccccchhhH-HHHHHHHcCeEEeccCCCCCccCCCEEEE
Confidence 555666666 789999999999999999999999999999999999998 99999999999999999999999999999
Q ss_pred ccCcCCCCCHHHHHHhhccc
Q psy5878 276 SNKRRMGLTEFEAVRGTAGE 295 (565)
Q Consensus 276 SN~~~LG~sE~e~v~~l~~~ 295 (565)
||++|||+||+|+|+.|+++
T Consensus 324 SN~~~LG~SE~eiv~~l~~~ 343 (366)
T 3jpz_A 324 SNAARLKKSEREFVQLLIDG 343 (366)
T ss_dssp EECCCSSSCHHHHHHHHHHH
T ss_pred eccccCCCCHHHHHHHHHHH
Confidence 99999999999999999988
No 10
>1qh4_A Creatine kinase; cancer, cellular energy metabolism, guanidino kinase, neurodegenerative disorders, transferase; 1.41A {Gallus gallus} SCOP: a.83.1.1 d.128.1.2 PDB: 3b6r_A* 3drb_A* 3dre_A 1g0w_A 1i0e_A 1u6r_A* 1vrp_A* 2crk_A
Probab=100.00 E-value=1.8e-86 Score=696.31 Aligned_cols=268 Identities=43% Similarity=0.758 Sum_probs=258.8
Q ss_pred HHhhccccccccccchhhhcCCHHHHHHhhcccCCCCcccC---------------------------------------
Q psy5878 25 LEAGFAKFQATESKSLLKKYLTKEIFDALKVKKTSFGSSLL--------------------------------------- 65 (565)
Q Consensus 25 ~~~~~~~l~~~~~~sl~~k~lt~~~~~~lk~~~t~~g~tl~--------------------------------------- 65 (565)
..+.|+.|. +|+|+|+||||+++|++||+++|++|+||.
T Consensus 15 ~~~~~p~l~--~~~s~~~k~lt~~~~~~lk~k~T~~g~tl~~~I~~gv~n~~~~~~~~vG~~A~D~esY~~F~~lfdpvI 92 (380)
T 1qh4_A 15 VDDEYPDLS--VHNNHMAKVLTLDLYKKLRDRQTSSGFTLDDVIQTGVDNPGHPFIMTVGCVAGDEESYEVFKELFDPVI 92 (380)
T ss_dssp HHHHSCCCT--TCCBHHHHHCCHHHHHHHTTCCCTTCCCHHHHHHHHHHCCCCSSSCBCCCCCSSTTHHHHTHHHHHHHH
T ss_pred chhhCCccc--ccccHHHhhCCHHHHHHhccccCCCCCcHHHHHHhcccCCCCcccCCcceEecCHHHHHHHHHHhHHHH
Confidence 577899995 799999999999999999999999999984
Q ss_pred ----------------------------CCCeEEEeeeeeeecCCCCCCCCCCCHHHHHHHHHHHHHHhcCcccccCCcE
Q psy5878 66 ----------------------------DGEFVISTRVRCGRSLQGYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGQF 117 (565)
Q Consensus 66 ----------------------------~~~~VlSsRIRlaRNl~g~~Fp~~ls~~e~~~ve~~i~~al~~l~~~~~g~y 117 (565)
|.+||+||||||||||+||||||+||++||++|+++|.+||.++++++.|+|
T Consensus 93 ~~~H~g~~~~~~h~~d~~~~~l~~~~~~d~~~VlSSRVRlaRNl~g~~FP~~ls~~e~~~ve~~v~~al~~l~g~~~g~y 172 (380)
T 1qh4_A 93 EDRHGGYKPTDEHKTDLNADNLQGGDDLDPNYVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLSVEALGSLGGDLKGKY 172 (380)
T ss_dssp HHHTTSCCTTCCCCCCCCGGGSCSCSCCCTTTEEEEEEEEEECBTTSCCTTTCCHHHHHHHHHHHHHHHTTCCGGGCEEE
T ss_pred HHHcCCCCCCCCCCCCCChhhccCccCCCCCEEEeeeceeeccCCCCCCCccCCHHHHHHHHHHHHHHHhccccccCceE
Confidence 3579999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHHHHhcCCCCCCC-cHHHHhhhccCCCCCceEEEEcCCCcEEEEECCCCceEEEEEccCCCHHHHHHHH
Q psy5878 118 YPLTGMTKEVQQKLIDDHFLFKEG-DRFLQAANACRFWPTGRGIYHNDNKTFLVWCNEEDHLRLISMQMGGDLGQVYRRL 196 (565)
Q Consensus 118 ~~l~~m~~~~~~~Lie~h~lf~~~-d~~l~~~g~~r~wp~grgi~~n~d~~~~v~VNeEDHLRI~s~~~G~~l~~~~~r~ 196 (565)
|+|++|++++|++|+|+||||+++ +++|.++|++|+||++||||||+|++|+||||||||||||||++|++|++||+|+
T Consensus 173 ~~L~~m~~~e~~~Lie~h~Lf~~~~sp~L~~ag~~r~Wp~grgi~~n~d~t~~vwVNEEDHLRIism~~G~~L~~v~~r~ 252 (380)
T 1qh4_A 173 YALRNMTDAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWINEEDHLRVISMQKGGNMKEVFTRF 252 (380)
T ss_dssp EEGGGCCHHHHHHHHHTTCCCCCCCCHHHHTTTTTTTTTTTCEEEEETTSSEEEEESSSSSEEEEEEEESSCHHHHHHHH
T ss_pred EEhhcCCHHHHHHHHHcCCCCCCCCCHHHHhcccccCCCCCceEEEeCCCceEEEEcCCCeEEEEEeecCCCHHHHHHHH
Confidence 999999999999999999999986 5699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc-----CCCcccCCCcccccCCCCCCCceeEEEEEeccccccChHHHHHHHHhcCeEeeeccCCCCCccCC
Q psy5878 197 VSAVNDIEKR-----LPFSHDDRLGFLTFCPTNLGTTVRASVHIKLPKLAADLSKLEEIAGRYNLQVRGTAGEHTESVGG 271 (565)
Q Consensus 197 ~~~~~~Le~~-----l~FA~~~~lGyLTscPtNlGTGlraSV~l~LP~L~~~~~~~~~i~~~~gl~~RG~~Ge~s~~~g~ 271 (565)
+++++.||+. ++||||++||||||||||+|||||||||||||+|+++++ |+++|.++|||+||+|||+|+++|+
T Consensus 253 ~~~~~~lE~~l~~~~l~FAf~~~lGYLTsCPtNlGTGLRASV~lhLP~L~~~~~-~~~il~klgL~vRG~~Ge~s~a~G~ 331 (380)
T 1qh4_A 253 CTGLTQIETLFKSKNYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPNLGKHEK-FGEVLKRLRLQKRGTGGVDTAAVGG 331 (380)
T ss_dssp HHHHHHHHHHHHHTTCCBCEETTTEECCSSGGGCBTCCEEEEEEECHHHHTSTT-HHHHHHHHTEEEECCCCSTTTTTTT
T ss_pred HHHHHHHHHHHhhcCCCeeecCCceeeeeCCCcCCcceEEEEEEEccccccchh-HHHHHHHcCeEEeccCCCCCCCCCC
Confidence 9999999984 689999999999999999999999999999999999998 9999999999999999999999999
Q ss_pred EEEeccCcCCCCCHHHHHHhhccc
Q psy5878 272 VYDISNKRRMGLTEFEAVRGTAGE 295 (565)
Q Consensus 272 iy~ISN~~~LG~sE~e~v~~l~~~ 295 (565)
+|||||++|||+||+|+|+.|+++
T Consensus 332 iydISN~~~LG~SE~eiv~~l~~~ 355 (380)
T 1qh4_A 332 VFDVSNADRLGFSEVELVQMVVDG 355 (380)
T ss_dssp EEEEEECCCSSSCHHHHHHHHHHH
T ss_pred EEEEECcccCCCCHHHHHHHHHHH
Confidence 999999999999999999999988
No 11
>3l2f_A Glycocyamine kinase beta chain; phosphagen kinase, transition state ANA kinase, transferase; HET: ADP; 2.30A {Namalycastis SP} PDB: 3l2e_B 3l2d_A* 3l2g_A* 3l2e_A
Probab=100.00 E-value=9.3e-86 Score=692.87 Aligned_cols=268 Identities=41% Similarity=0.737 Sum_probs=255.3
Q ss_pred HHhhccccccccccchhhhcCCHHHHHHhhcccCCCCcccC---------------------------------------
Q psy5878 25 LEAGFAKFQATESKSLLKKYLTKEIFDALKVKKTSFGSSLL--------------------------------------- 65 (565)
Q Consensus 25 ~~~~~~~l~~~~~~sl~~k~lt~~~~~~lk~~~t~~g~tl~--------------------------------------- 65 (565)
.++.||+|. +|+|+|+|||||++|++||+++|++|+||+
T Consensus 27 ~~~~~p~l~--~~~s~~~k~Lt~~~~~~lk~k~T~~g~tl~~~Iq~gv~np~~~p~~~~vG~~AgD~esY~vF~~lfdpv 104 (390)
T 3l2f_A 27 AADNFPDLS--KHNNVMASQLTKELYEKYWDKVTPNGVTFDKCIQTGVDNPGNKFYGKKTGCVFGDEYSYECYKEFFDKC 104 (390)
T ss_dssp STTSCCCCS--SCCBHHHHHCCHHHHHHHTTCCCTTSCCHHHHHHHHHHCSCCSSSSCBCCCCCSSTTHHHHTHHHHHHH
T ss_pred chhcCCCcc--cccchhhhhCCHHHHHHHhCCCCCCCCcHHHHHHhhccCCCCCcccccccceeCChHHHHHHHHHHhHH
Confidence 457899995 899999999999999999999999999995
Q ss_pred ----------------------------CCCeEEEeeeeeeecCCCCCCCCCCCHHHHHHHHHHHHHHhcCcccccCCcE
Q psy5878 66 ----------------------------DGEFVISTRVRCGRSLQGYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGQF 117 (565)
Q Consensus 66 ----------------------------~~~~VlSsRIRlaRNl~g~~Fp~~ls~~e~~~ve~~i~~al~~l~~~~~g~y 117 (565)
|.+||+||||||||||+||||||+||++||++||++|.+||.++++++.|+|
T Consensus 105 I~~~H~~~~~~~h~~~d~~~~~l~~~~~D~~~VlSSRVRlaRNl~g~~FP~~~s~~er~~ve~~v~~aL~~l~~~~~g~y 184 (390)
T 3l2f_A 105 IEEIHHFKPSDKHPAPDLDHNKLVGGVFEDKYVKSCRIRCGRSVKGVCLPPAMSRAERRLVEKVVSDALGGLKGDLAGKY 184 (390)
T ss_dssp HHHHHCCCTTCCCCCCCCCGGGCCCCCCCTTTEEEEEEEEEECBTTSCCTTTCCHHHHHHHHHHHHHHGGGCCGGGCEEE
T ss_pred HHHHhCCCCcccCCCCCCCcccccCCCCCCceEEEeeeeEEEecCCCCCCccCCHHHHHHHHHHHHHHHhcccccccccE
Confidence 3479999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCHHHHHHHHhcCCCCCC-CcHHHHhhhccCCCCCceEEEEcCCCcEEEEECCCCceEEEEEccCCCHHHHHHH-
Q psy5878 118 YPLTGMTKEVQQKLIDDHFLFKE-GDRFLQAANACRFWPTGRGIYHNDNKTFLVWCNEEDHLRLISMQMGGDLGQVYRR- 195 (565)
Q Consensus 118 ~~l~~m~~~~~~~Lie~h~lf~~-~d~~l~~~g~~r~wp~grgi~~n~d~~~~v~VNeEDHLRI~s~~~G~~l~~~~~r- 195 (565)
|+|++|++++|++|+|+||||++ .+++|.++|++|+||++||||||+|++|+||||||||||||||++|++|++||+|
T Consensus 185 ~~L~~m~~~e~~~Lie~H~LF~k~~sp~l~~ag~~r~wp~grgI~~n~dktflVwVNEEDHLRIism~~G~~l~~vf~r~ 264 (390)
T 3l2f_A 185 YPLTTMNEKDQEQLIEDHFLFEKPTGALLTTSGCARDWPDGRGIWHNNEKNFLVWINEEDHIRVISMQKGGDLKAVFSRF 264 (390)
T ss_dssp EESTTSCHHHHHHHHHTTSSCCCSCCHHHHHTTTTTTTTTTCEEEEESSSSEEEEESSSSSEEEEEEEESSCHHHHHHHH
T ss_pred eehhcCCHHHHHHHHHcCcccCCCCCHHHHhhhccccCCCceEEEEcCCCCEEEEEccCCcEEEEEEeCCCCHHHHHHHH
Confidence 99999999999999999999954 4789999999999999999999999999999999999999999999999999999
Q ss_pred ---HHHHHHHHhhc-CCCcccCCCcccccCCCCCCCceeEEEEEeccccccChHHHHHHHHhcCeEeeeccCCCCCccCC
Q psy5878 196 ---LVSAVNDIEKR-LPFSHDDRLGFLTFCPTNLGTTVRASVHIKLPKLAADLSKLEEIAGRYNLQVRGTAGEHTESVGG 271 (565)
Q Consensus 196 ---~~~~~~~Le~~-l~FA~~~~lGyLTscPtNlGTGlraSV~l~LP~L~~~~~~~~~i~~~~gl~~RG~~Ge~s~~~g~ 271 (565)
+.++++.|+++ ++||||++||||||||||+|||||||||||||+|+++++ |+++|.++|||+||+|||+|+++|+
T Consensus 265 ~~~~~~ie~~l~~~gl~FAfd~~lGYLTsCPtNlGTGLRASV~lhLP~L~~~~~-~~~il~klgLqvRG~~Ge~s~a~G~ 343 (390)
T 3l2f_A 265 ARGLLEVERLMKECGHGLMHNDRLGYICTCPTNMGTVVRASVHLRLAFLEKHPR-FDEMLGKLRLGKRGTGGESSLATDS 343 (390)
T ss_dssp HHHHHHHHHHHHHTTCCBCEETTTEECCSSTTSCBTCEEEEEEEECTTGGGCTT-HHHHHHHTTEEEEBTTBTTSCCBTT
T ss_pred HHHHHHHHHHHHhcCcceeecCCcceEecCCcccCcceEEEEEEEccccchhhH-HHHHHHHcCeEEecCCCCCCcccCC
Confidence 55555666666 899999999999999999999999999999999999998 9999999999999999999999999
Q ss_pred EEEeccCcCCCCCHHHHHHhhccc
Q psy5878 272 VYDISNKRRMGLTEFEAVRGTAGE 295 (565)
Q Consensus 272 iy~ISN~~~LG~sE~e~v~~l~~~ 295 (565)
+|||||++|||+||+|+|+.|+++
T Consensus 344 iydISN~~~LG~SE~eiV~~l~~~ 367 (390)
T 3l2f_A 344 TYDISNWARLGKSERELVQVLVDG 367 (390)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHH
T ss_pred EEEEecccccCCCHHHHHHHHHHH
Confidence 999999999999999999999988
No 12
>2gl6_A Creatine kinase; non-protein kinase, ADP, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP; 2.30A {Homo sapiens} PDB: 1crk_A 1qk1_A
Probab=100.00 E-value=1.2e-85 Score=692.51 Aligned_cols=269 Identities=41% Similarity=0.743 Sum_probs=243.8
Q ss_pred HhhccccccccccchhhhcCCHHHHHHhhcccCCCCcccC----------------------------------------
Q psy5878 26 EAGFAKFQATESKSLLKKYLTKEIFDALKVKKTSFGSSLL---------------------------------------- 65 (565)
Q Consensus 26 ~~~~~~l~~~~~~sl~~k~lt~~~~~~lk~~~t~~g~tl~---------------------------------------- 65 (565)
.+.|+.|. +|+|+|+|||||++|++||+++|++|+||.
T Consensus 27 ~~~~p~l~--~~~s~~~k~lt~~~~~~lk~k~T~~g~tl~~~I~sgv~n~~~~~~~~vG~~A~D~esY~~F~~lfdpvI~ 104 (392)
T 2gl6_A 27 SADYPDLR--KHNNCMAECLTPAIYAKLRNKVTPNGYTLDQCIQTGVDNPGHPFIKTVGMVAGDEESYEVFADLFDPVIK 104 (392)
T ss_dssp GGGCCCCT--TCCSHHHHHCCHHHHHHHTTCBCTTCCBHHHHHHHHHHCC------CCCCCCSSTTHHHHTHHHHHHHHH
T ss_pred cccCCccc--cccCHHHHhCCHHHHHHhhcccCCCCCcHHHHHHhcccCCCCcccCCCceecCCHHHHHHHHHHhHHHHH
Confidence 45688885 799999999999999999999999999984
Q ss_pred ---------------------------CCCeEEEeeeeeeecCCCCCCCCCCCHHHHHHHHHHHHHHhcCcccccCCcEE
Q psy5878 66 ---------------------------DGEFVISTRVRCGRSLQGYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGQFY 118 (565)
Q Consensus 66 ---------------------------~~~~VlSsRIRlaRNl~g~~Fp~~ls~~e~~~ve~~i~~al~~l~~~~~g~y~ 118 (565)
|.+||+||||||||||+||||||+||++||++|+++|.+||.++.+++.|+||
T Consensus 105 ~~H~g~~~~~~~h~~d~~~~~l~~~~~d~~~VlSSRVRlaRNl~g~~FP~~ls~~e~~~ve~~v~~al~~l~g~~~g~y~ 184 (392)
T 2gl6_A 105 LRHNGYDPRVMKHTTDLDASKITQGQFDEHYVLSSRVRTGRSIRGLSLPPACTRAERREVENVAITALEGLKGDLAGRYY 184 (392)
T ss_dssp HHTTTCCTTTCCCCCCCCTTC--------------CEEEEECBTTSCCTTTCCHHHHHHHHHHHHHHHHTCCGGGCEEEE
T ss_pred HHcCCCCccccCCCCCCChhhccCCCCCCCEEEeeeeeeeeecCCCCCCccCCHHHHHHHHHHHHHHHhccCcccCcEEE
Confidence 24689999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHHHHhcCCCCCCC-cHHHHhhhccCCCCCceEEEEcCCCcEEEEECCCCceEEEEEccCCCHHHHHHHHH
Q psy5878 119 PLTGMTKEVQQKLIDDHFLFKEG-DRFLQAANACRFWPTGRGIYHNDNKTFLVWCNEEDHLRLISMQMGGDLGQVYRRLV 197 (565)
Q Consensus 119 ~l~~m~~~~~~~Lie~h~lf~~~-d~~l~~~g~~r~wp~grgi~~n~d~~~~v~VNeEDHLRI~s~~~G~~l~~~~~r~~ 197 (565)
+|++|++.+|++|+|+||||+++ +++|.++|++|+||+|||||||+|++|+||||||||||||||++|++|++||+|++
T Consensus 185 ~L~~m~~~e~~~Lie~h~Lf~~~~s~~L~~ag~~r~Wp~grgI~~n~dkt~~VwVNEEDHLRIism~~G~~L~~v~~r~~ 264 (392)
T 2gl6_A 185 KLSEMTEQDQQRLIDDHFLFDKPVSPLLTCAGMARDWPDARGIWHNYDKTFLIWINEEDHTRVISMEKGGNMKRVFERFC 264 (392)
T ss_dssp ESTTSCHHHHHHHHHTTSSCCCSCCHHHHTTTTTTTTTTTCEEEEETTSSEEEEESSSSSEEEEEC----CHHHHHHHHH
T ss_pred EcccCCHHHHHHHHHcCCCCCCCCCHHHHhcccccCCCCCceEEEcCCCcEEEEEcccceEEEEEecCCCCHHHHHHHHH
Confidence 99999999999999999999986 46999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh-----cCCCcccCCCcccccCCCCCCCceeEEEEEeccccccChHHHHHHHHhcCeEeeeccCCCCCccCCE
Q psy5878 198 SAVNDIEK-----RLPFSHDDRLGFLTFCPTNLGTTVRASVHIKLPKLAADLSKLEEIAGRYNLQVRGTAGEHTESVGGV 272 (565)
Q Consensus 198 ~~~~~Le~-----~l~FA~~~~lGyLTscPtNlGTGlraSV~l~LP~L~~~~~~~~~i~~~~gl~~RG~~Ge~s~~~g~i 272 (565)
++++.||+ .++||||++||||||||||+|||||||||||||+|+++++ |+++|.++|||+||+|||+|+++|++
T Consensus 265 ~~~~~ie~~l~~~~l~FAfd~~lGYLTsCPtNlGTGLRASV~lhLP~L~~~~~-~~~il~klgLqvRG~~Ge~sea~G~i 343 (392)
T 2gl6_A 265 RGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHVRIPKLSKDPR-FSKILENLRLQKRGTGGVDTAAVADV 343 (392)
T ss_dssp HHHHHHHHHHHHTTCCBCEETTTEECCSSGGGCBTCCEEEEEEECHHHHHSTT-HHHHHHHTTEEEEBTTBTTSCCBTTE
T ss_pred HHHHHHHHHHHhcCCceeecCCceeeeeCCCCCCcceEEEEEEEccccccchh-HHHHHHHcCeEEEecCCCCCccCCCE
Confidence 66555553 6789999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred EEeccCcCCCCCHHHHHHhhccccc
Q psy5878 273 YDISNKRRMGLTEFEAVRGTAGEHT 297 (565)
Q Consensus 273 y~ISN~~~LG~sE~e~v~~l~~~~~ 297 (565)
|||||++|||+||+|+|+.|+++-.
T Consensus 344 ydISN~~~LG~SE~eiV~~l~~~v~ 368 (392)
T 2gl6_A 344 YDISNIDRIGRSEVELVQIVIDGVN 368 (392)
T ss_dssp EEEEESCCSSSCHHHHHHHHHCC--
T ss_pred EEEeCcccCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999998843
No 13
>2dt7_A Splicing factor 3A subunit 3; structure genomics, SF3A120, SF3A60, SURP domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.38 E-value=25 Score=24.77 Aligned_cols=18 Identities=22% Similarity=0.765 Sum_probs=15.0
Q ss_pred hhhhhhhHH--HHhhcCCCC
Q psy5878 333 VFADLFDPI--IEDYHKGFK 350 (565)
Q Consensus 333 ~F~~lfdpi--i~~~H~~~~ 350 (565)
+|++|++.+ |+|||..|.
T Consensus 11 ~f~~FY~rlk~Ike~Hrr~P 30 (38)
T 2dt7_A 11 EFAEFYNRLKQIKEFHRKHP 30 (38)
T ss_dssp HHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHhCC
Confidence 699999988 999997553
Done!