BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy588
(903 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q28623|SLMAP_RABIT Sarcolemmal membrane-associated protein OS=Oryctolagus cuniculus
GN=SLMAP PE=1 SV=2
Length = 771
Score = 322 bits (826), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 172/390 (44%), Positives = 249/390 (63%), Gaps = 26/390 (6%)
Query: 2 AGTAILTCRPNSHPFAERKLILENTANKNAAVKIGRCIARAKVAPSNGIFDCKVLSRNHA 61
+ AI TCRPNSHPF ER + L + +KIGR +AR + A +N FDCKVLSRNHA
Sbjct: 3 SALAIFTCRPNSHPFQERHVYL------DEPIKIGRSVARCRPAQNNATFDCKVLSRNHA 56
Query: 62 LIWY--YNGKFYLQDTKSSNGTFVNNQRLSKTNEESAPHELCSGDVVQFGVDVIETNRNT 119
L+W+ GKFYLQDTKSSNGTF+N+QRLS+ +EES P E+ SGD++QFGVDV E R
Sbjct: 57 LVWFDHKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRK- 115
Query: 120 PVTHGCIIANLKLFLPDGKEAK----------ASPTSMLISSMPL---EELYQLNTCIQE 166
VTHGCI++ +KLFLPDG EA+ SP + ++ P +EL+QL+ +QE
Sbjct: 116 -VTHGCIVSTIKLFLPDGMEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQE 174
Query: 167 ALQRENMLKNKLSKLQHIVIDLKKAADVSWKALIQEDRLLSRVEFLESQLAAYSKSFTDD 226
AL RE ML+ KL+ LQ ++ ++A+D SW+ALI EDRLLSR+E + +QL A SK+ T+D
Sbjct: 175 ALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTED 234
Query: 227 KLRDEIKLLHRDKSTYENQLKEVMKKMLAEKVEVMQKCQDTERKLVNIENECSNLQELLD 286
LR E+ L DK YE KE ++++L EK+EV++K + ER L N E+EC++L+E+ +
Sbjct: 235 SLRKELIALQEDKHNYETTAKESLRRVLQEKIEVVRKLSEVERSLSNTEDECTHLKEMNE 294
Query: 287 RNRDELEEIIKKYQDQVTKNKEFESTIDQLLNSNQEKSNTLEKLQYETLQAQKQLDAFTL 346
R ++EL E+ KY V + K+ D+L + ++ +K Q E + Q ++D
Sbjct: 295 RTQEELRELANKYNGAVNEIKDLS---DKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEE 351
Query: 347 KDNLMHDKLKNYYMNFHIIKEKMTNIKNEL 376
K+ + K++ + E++T ++ L
Sbjct: 352 KEQELQAKIEALQADNDFTNERLTALQEHL 381
>sp|Q14BN4|SLMAP_HUMAN Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP
PE=1 SV=1
Length = 828
Score = 322 bits (824), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 172/390 (44%), Positives = 249/390 (63%), Gaps = 26/390 (6%)
Query: 2 AGTAILTCRPNSHPFAERKLILENTANKNAAVKIGRCIARAKVAPSNGIFDCKVLSRNHA 61
+ AI TCRPNSHPF ER + L + +KIGR +AR + A +N FDCKVLSRNHA
Sbjct: 3 SALAIFTCRPNSHPFQERHVYL------DEPIKIGRSVARCRPAQNNATFDCKVLSRNHA 56
Query: 62 LIWY--YNGKFYLQDTKSSNGTFVNNQRLSKTNEESAPHELCSGDVVQFGVDVIETNRNT 119
L+W+ GKFYLQDTKSSNGTF+N+QRLS+ +EES P E+ SGD++QFGVDV E R
Sbjct: 57 LVWFDHKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRK- 115
Query: 120 PVTHGCIIANLKLFLPDGKEAK----------ASPTSMLISSMPL---EELYQLNTCIQE 166
VTHGCI++ +KLFLPDG EA+ SP + ++ P +EL+QL+ +QE
Sbjct: 116 -VTHGCIVSTIKLFLPDGMEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQE 174
Query: 167 ALQRENMLKNKLSKLQHIVIDLKKAADVSWKALIQEDRLLSRVEFLESQLAAYSKSFTDD 226
AL RE ML+ KL+ LQ ++ ++A+D SW+ALI EDRLLSR+E + +QL A SK+ T+D
Sbjct: 175 ALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTED 234
Query: 227 KLRDEIKLLHRDKSTYENQLKEVMKKMLAEKVEVMQKCQDTERKLVNIENECSNLQELLD 286
LR E+ L DK YE KE ++++L EK+EV++K + ER L N E+EC++L+E+ +
Sbjct: 235 SLRKELIALQEDKHNYETTAKESLRRVLQEKIEVVRKLSEVERSLSNTEDECTHLKEMNE 294
Query: 287 RNRDELEEIIKKYQDQVTKNKEFESTIDQLLNSNQEKSNTLEKLQYETLQAQKQLDAFTL 346
R ++EL E+ KY V + K+ D+L + ++ +K Q E + Q ++D
Sbjct: 295 RTQEELRELANKYNGAVNEIKDLS---DKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEE 351
Query: 347 KDNLMHDKLKNYYMNFHIIKEKMTNIKNEL 376
K+ + K++ + E++T ++ L
Sbjct: 352 KEQELQAKIEALQADNDFTNERLTALQVRL 381
>sp|Q3URD3|SLMAP_MOUSE Sarcolemmal membrane-associated protein OS=Mus musculus GN=Slmap
PE=1 SV=2
Length = 845
Score = 321 bits (822), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/425 (41%), Positives = 262/425 (61%), Gaps = 33/425 (7%)
Query: 2 AGTAILTCRPNSHPFAERKLILENTANKNAAVKIGRCIARAKVAPSNGIFDCKVLSRNHA 61
+ AI TCRPNSHPF ER + L + +KIGR +AR + A +N FDCKVLSRNHA
Sbjct: 3 SALAIFTCRPNSHPFQERHVYL------DEPIKIGRSVARCRPAQNNATFDCKVLSRNHA 56
Query: 62 LIWY--YNGKFYLQDTKSSNGTFVNNQRLSKTNEESAPHELCSGDVVQFGVDVIETNRNT 119
L+W+ KFYLQDTKSSNGTF+N+QRLS+ +EES P E+ SGD++QFGVDV E R
Sbjct: 57 LVWFDHKTSKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRK- 115
Query: 120 PVTHGCIIANLKLFLPDGKEAK----------ASPTSMLISSMPL---EELYQLNTCIQE 166
VTHGCI++ +KLFLPDG EA+ SP + ++ P +EL+QL+ +QE
Sbjct: 116 -VTHGCIVSTIKLFLPDGMEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQE 174
Query: 167 ALQRENMLKNKLSKLQHIVIDLKKAADVSWKALIQEDRLLSRVEFLESQLAAYSKSFTDD 226
AL RE ML+ KL+ LQ ++ ++A+D SW+ALI EDRLLSR+E + +QL A SK+ T+D
Sbjct: 175 ALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTED 234
Query: 227 KLRDEIKLLHRDKSTYENQLKEVMKKMLAEKVEVMQKCQDTERKLVNIENECSNLQELLD 286
LR E+ L DK +YE KE ++++L EK+EV++K + ER L N E+EC++L+E+ +
Sbjct: 235 SLRKELIALQEDKHSYETTAKESLRRVLQEKIEVVRKLSEVERSLSNTEDECTHLKEMNE 294
Query: 287 RNRDELEEIIKKYQDQVTKNKEFESTIDQLLNSNQEKSNTLEKLQYETLQAQKQLDAFTL 346
R ++EL E+ KY V + K+ D+L + ++ +K Q E + Q ++D
Sbjct: 295 RTQEELRELANKYNGAVNEIKDLS---DKLKVAEGKQEEIQQKGQAEKKELQTKIDEMEE 351
Query: 347 KDNLMHDKLKNYYMNFHIIKEKMTNIKNELGLETKVDQNILVKYFDDVHQILTQFDEYFL 406
K+ + K++ + E++T ++ L +++ K + + Q D++
Sbjct: 352 KEQELQAKIEALQADNDFTNERLTALQVRL-------EHLQEKTLKECSSLGIQVDDFLP 404
Query: 407 RFNES 411
+ N S
Sbjct: 405 KINGS 409
>sp|P0C219|SLMAP_RAT Sarcolemmal membrane-associated protein OS=Rattus norvegicus
GN=Slmap PE=2 SV=1
Length = 858
Score = 320 bits (820), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 170/388 (43%), Positives = 248/388 (63%), Gaps = 26/388 (6%)
Query: 2 AGTAILTCRPNSHPFAERKLILENTANKNAAVKIGRCIARAKVAPSNGIFDCKVLSRNHA 61
+ AI TCRPNSHPF ER + L+ +KIGR +AR + A +N FDCKVLSRNHA
Sbjct: 3 SALAIFTCRPNSHPFQERHVYLDE------PIKIGRSVARCRPAQNNATFDCKVLSRNHA 56
Query: 62 LIWY--YNGKFYLQDTKSSNGTFVNNQRLSKTNEESAPHELCSGDVVQFGVDVIETNRNT 119
L+W+ KFYLQDTKSSNGTF+N+QRLS+ +EES P E+ SGD++QFGVDV E R
Sbjct: 57 LVWFDHKTSKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRKV 116
Query: 120 PVTHGCIIANLKLFLPDGKEAK-----------ASPTSMLISSMPL---EELYQLNTCIQ 165
VTHGCI++ +KLFLPDG EA+ SP + ++ P +EL+QL+ +Q
Sbjct: 117 -VTHGCIVSTIKLFLPDGMEARLRSDDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQ 175
Query: 166 EALQRENMLKNKLSKLQHIVIDLKKAADVSWKALIQEDRLLSRVEFLESQLAAYSKSFTD 225
EAL RE ML+ KL+ LQ ++ ++A+D SW+ALI EDRLLSR+E + +QL A SK+ T+
Sbjct: 176 EALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTE 235
Query: 226 DKLRDEIKLLHRDKSTYENQLKEVMKKMLAEKVEVMQKCQDTERKLVNIENECSNLQELL 285
D LR E+ L DK +YE KE ++++L EK+EV++K + ER L N E+EC++L+E+
Sbjct: 236 DSLRKELVALQEDKHSYETTAKESLRRVLQEKIEVVRKLSEVERSLSNTEDECTHLREMN 295
Query: 286 DRNRDELEEIIKKYQDQVTKNKEFESTIDQLLNSNQEKSNTLEKLQYETLQAQKQLDAFT 345
+R ++EL E+ KY V + K+ D+L + ++ +K Q E + Q ++D
Sbjct: 296 ERTQEELRELANKYNGAVNEIKDLS---DKLKAAEGKQEEIQQKGQAEKKELQAKIDDME 352
Query: 346 LKDNLMHDKLKNYYMNFHIIKEKMTNIK 373
K+ + K++ + E++T ++
Sbjct: 353 EKEQELQAKIEALQADNDFTNERLTALQ 380
>sp|O74388|YNVD_SCHPO Uncharacterized protein C3H7.13 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC3H7.13 PE=1 SV=1
Length = 301
Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 14/169 (8%)
Query: 4 TAILTCRPNSHPFAERKLILENTANKNAAVKIGRCIARA-KVAPSNGIFDCKVLSRNHAL 62
+A++T P + F +KL++ + + KIGR ++ +PSN F+ KVLSR HA
Sbjct: 2 SAVITLTPLNESFQTKKLVI----SPSTIYKIGRHTNKSTSPSPSNLFFNSKVLSRQHAE 57
Query: 63 IWYYNGKF--YLQDTKSSNGTFVNNQRLSKTNEESAPHELCSGDVVQFGVDVIETNRNTP 120
+W Y++D KSSNGTFVN RLS N+ SAP +L SGD+V FGVD+ +
Sbjct: 58 LWLDKDTLSVYIRDVKSSNGTFVNETRLSPENKPSAPCKLNSGDIVDFGVDIYNEDE--- 114
Query: 121 VTHGCIIANLKLFLPDGKEAKASPTSM----LISSMPLEELYQLNTCIQ 165
+ H + A +++ + A S+ ++ S+ + ++Q C++
Sbjct: 115 IVHQKVSAQVRIVVRGATFATTPARSLDSEVMLDSIMRQMVFQYQRCVE 163
>sp|Q9Y228|T3JAM_HUMAN TRAF3-interacting JNK-activating modulator OS=Homo sapiens
GN=TRAF3IP3 PE=1 SV=2
Length = 551
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 91/158 (57%), Gaps = 7/158 (4%)
Query: 156 ELYQLNTCIQEALQRENMLKNKLSKLQHIVIDLKKAADVSWKALIQEDRLLSRVEFLESQ 215
E+ QL+ ++EALQRE +LK K+ LQ ++ L +A+D SWK + ED+L ++ LE+Q
Sbjct: 193 EIIQLSDYLKEALQRELVLKQKMVILQDLLSTLIQASDSSWKGQLNEDKLKGKLRSLENQ 252
Query: 216 LAAYSKSFTDDKLRDEIKLLHRDKSTYENQLKEVMKKMLAEKVEVMQKCQDTERKLVNIE 275
L ++ ++ ++ + + K++YE + KE ++K+L EK+ Q+ Q T+R L E
Sbjct: 253 LYTCTQKYSPWGMKKVLLEMEDQKNSYEQKAKESLQKVLEEKMNAEQQLQSTQRSLALAE 312
Query: 276 NECSNLQELLDRNRDELEEIIKKYQDQVTKNKEFESTI 313
+C R + E + + ++ T+++E ES +
Sbjct: 313 QKCEEW-------RSQYEALKEDWRTLGTQHRELESQL 343
>sp|Q10322|DMA1_SCHPO Probable E3 ubiquitin-protein ligase dma1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dma1 PE=1 SV=1
Length = 267
Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
Query: 11 PNSHPFAERKLI-LENTANKNAAVKIGRCIARAKVAPSNGI-FDCKVLSRNHALIWYYNG 68
PN+H F+ L+ N N + IGR R + I F KV+SR HA I+Y N
Sbjct: 37 PNAHSFSFDPLVRYWNRKQNNLPIYIGRYTERYNGGDVSAIVFRSKVVSRRHAQIFYENN 96
Query: 69 KFYLQDTKSSNGTFVNNQRLSKTNEESAPHELCSGDVVQFGVDVIETNRNTPVTHGCIIA 128
+Y+QD SS+GTF+N+ RLS ++ S P+ + + D++Q G D + V + C+ A
Sbjct: 97 TWYIQDMGSSSGTFLNHVRLSPPSKTSKPYPISNNDILQLGADYRGGHE---VNYRCVRA 153
Query: 129 NLKL 132
++L
Sbjct: 154 RVEL 157
>sp|Q06001|FAR10_YEAST Factor arrest protein 10 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=FAR10 PE=1 SV=1
Length = 478
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 7/73 (9%)
Query: 42 AKVAPSNGIFDCKVLSRNHALIWY--YNGKFYLQDTKSSNGTFVNNQRLSKTNEESAPHE 99
++V NG FD +VLSRNHAL+ GK Y++D KSSNGTF+N QR+ + E
Sbjct: 128 SQVRSDNGNFDSRVLSRNHALLSCDPLTGKVYIRDLKSSNGTFINGQRIGSNDV-----E 182
Query: 100 LCSGDVVQFGVDV 112
+ GDV+ G D+
Sbjct: 183 IKVGDVIDLGTDI 195
>sp|Q8C0G2|T3JAM_MOUSE TRAF3-interacting JNK-activating modulator OS=Mus musculus
GN=Traf3ip3 PE=1 SV=2
Length = 513
Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 97/190 (51%), Gaps = 14/190 (7%)
Query: 156 ELYQLNTCIQEALQRENMLKNKLSKLQHIVIDLKKAADVSWKALIQEDRLLSRVEFLESQ 215
++ QL+ ++EAL RE +LK K+ LQ ++ L +A+D SWK + ED+L ++ LE+Q
Sbjct: 194 DIIQLSEYLKEALHRELILKKKMVILQDLLPALIRASDSSWKGQLNEDKLKGKLRSLENQ 253
Query: 216 LAAYSKSFTDDKLRDEIKLLHRDKSTYENQLKEVMKKMLAEKVEVMQKCQDTERKLVNIE 275
L + + ++ + + +S+YE + K ++K+L EK+ Q+ Q + L E
Sbjct: 254 LYTCLQKHSPWGMKKVLLEMEDQRSSYEQKAKASLQKVLEEKMCAEQQLQRAQLSLALAE 313
Query: 276 NECS-----------NLQELLDRNRD---ELEEIIKKYQDQVTKNKEFESTIDQLLNSNQ 321
+C + + L D++R+ +L + K Q +++ + + L N +Q
Sbjct: 314 QKCQEWKSQYEALKEDWRTLGDQHRELESQLHVLQSKLQGADSRDSQMSQALQLLENEHQ 373
Query: 322 EKSNTLEKLQ 331
E LE LQ
Sbjct: 374 ELQTKLESLQ 383
>sp|P21249|ANT1_ONCVO Major antigen OS=Onchocerca volvulus GN=OVT1 PE=2 SV=2
Length = 2022
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 169/400 (42%), Gaps = 65/400 (16%)
Query: 404 YFLRFNESESSGLNSIEDIEKVTKDLREQLHTAQEEYTSLQEIVNRNEEQLAFLEQSKYL 463
Y + ++E + I+ + + +LR +L+ A+ LQ NR+ + LE+
Sbjct: 946 YHIEWDEERDNHQKKIDSMNALIDELRSKLNDAERAMADLQ---NRD----SILERENND 998
Query: 464 HLDKIGGLELQLEKLKQTYNSDCYENEKFGKAYNCD--TLLINEEKTVAPNQKDVNIIDV 521
+K L ++L++L+ S + EK YN D T NE K + P ++
Sbjct: 999 WKEKSDALNMELDRLRDELLSVRRDAEKEINRYNTDLQTAARNEIKLLTPTNNEM----- 1053
Query: 522 SNQYNSEKDFV-SINKEIEESSRKIDDINAEITKCTNELVDAKNCLVKNEKWVINLQEQF 580
+Q N+ +D + S+NK I + KI D+ E+ EL DAK + E + +E+
Sbjct: 1054 KSQLNAAEDKINSLNKVITDQQNKIRDLTGEVHHLEGELKDAKGNVANLESELDTTRERI 1113
Query: 581 SLLEKSKETWVSLKLNSAESQSSASLQSQLN------DAL----DNIKKYKEEHSKMTME 630
LL + +ASLQ++LN D+L D +K KE + E
Sbjct: 1114 HLL----------------GEQNASLQTELNKIKGDIDSLFGENDMLKTAKESNE---AE 1154
Query: 631 IESLKEKLKFSQSKENDLLEEYEKLKLVIKDYQNVLPSIVESMNNTKDKPQDSEQSIEEE 690
I+ LK+KL+ S + +KL+ QN+ ++ N QD E +
Sbjct: 1155 IDRLKQKLQRSIENAKKYSDALDKLRPEYDRLQNLYREKIKQAENLTQAVQDLESRL--- 1211
Query: 691 ITQQSLNPLSSELDETIHKNVESVTSNMENDKSNEDDNSSVQSTDEVKDTEEGPHTPSLV 750
QS L D+ I ++E D ++++S E E L+
Sbjct: 1212 --NQSRRELRDATDKLI---------------ASEGDRNALRSEVEKLQHEVQFMREQLL 1254
Query: 751 DKSED-TISVTTLVNVNTESSEGDLSPIDPPESVIALIND 789
K+++ +++ LVN + + +G ++ + E+ IND
Sbjct: 1255 RKTDEYQAALSDLVNAHRTAEDGRVNAVQALEARKYEIND 1294
>sp|Q09857|USO1_SCHPO Intracellular protein transport protein uso1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=uso1 PE=3 SV=3
Length = 1067
Score = 34.7 bits (78), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 617 IKKYKEEHSKMTMEIESLKEKLKFSQSKENDLLEEYEKLK 656
IK + EEHSK+T +++ +K + SK DLL E EK K
Sbjct: 728 IKDFIEEHSKLTKQLDDIKNQFGIISSKNRDLLSELEKSK 767
>sp|Q02455|MLP1_YEAST Protein MLP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=MLP1 PE=1 SV=2
Length = 1875
Score = 33.9 bits (76), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 757 ISVTTLVNVNTESSEGDLSPIDPPESVIALINDDDTSDSSSEMTDSSTLIRIRKPKPVSV 816
+S L+ +N++SS G +P P L ND+D +S + TD T + +P ++
Sbjct: 1709 LSGEKLLKLNSKSSSGGFNPFTSPSPNKHLQNDNDKRESLANKTDPPTHL---EP-SFNI 1764
Query: 817 PTDASLVKPQSTTGCQTSDEFLLCNIEAHK 846
P L+ ST T+DE L N A K
Sbjct: 1765 PASRGLISSSSTLSTDTNDEELTSNNPAQK 1794
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.127 0.344
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 316,367,499
Number of Sequences: 539616
Number of extensions: 13573257
Number of successful extensions: 82892
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 3663
Number of HSP's that attempted gapping in prelim test: 63595
Number of HSP's gapped (non-prelim): 13564
length of query: 903
length of database: 191,569,459
effective HSP length: 127
effective length of query: 776
effective length of database: 123,038,227
effective search space: 95477664152
effective search space used: 95477664152
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)